Query psy14130
Match_columns 494
No_of_seqs 684 out of 4072
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 20:19:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-49 1E-53 388.1 45.1 353 88-443 4-398 (402)
2 1vyh_C Platelet-activating fac 100.0 2.6E-39 8.9E-44 317.9 35.3 217 149-383 172-409 (410)
3 3ow8_A WD repeat-containing pr 100.0 6.2E-39 2.1E-43 304.5 35.5 216 149-383 102-319 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 9.7E-39 3.3E-43 305.9 36.8 220 149-382 119-340 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 1.9E-38 6.5E-43 305.5 38.4 290 3-382 61-354 (354)
6 4gqb_B Methylosome protein 50; 100.0 1.3E-38 4.5E-43 304.7 35.0 224 149-385 103-331 (344)
7 4g56_B MGC81050 protein; prote 100.0 1.4E-38 4.6E-43 306.8 33.0 224 148-385 114-343 (357)
8 2ynn_A Coatomer subunit beta'; 100.0 7.4E-38 2.5E-42 294.9 35.3 220 149-385 77-302 (304)
9 3iz6_a 40S ribosomal protein R 100.0 1.6E-38 5.6E-43 309.1 31.5 298 3-385 63-375 (380)
10 1nr0_A Actin interacting prote 100.0 3.5E-37 1.2E-41 318.4 40.3 331 3-385 56-522 (611)
11 3frx_A Guanine nucleotide-bind 100.0 1.3E-36 4.4E-41 288.5 38.0 218 149-385 87-317 (319)
12 4ery_A WD repeat-containing pr 100.0 2.1E-36 7.2E-41 286.1 37.0 220 149-384 87-311 (312)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-36 6.8E-41 290.4 36.4 225 149-385 83-335 (345)
14 2hes_X YDR267CP; beta-propelle 100.0 9E-36 3.1E-40 284.0 34.9 228 149-385 80-328 (330)
15 2xzm_R RACK1; ribosome, transl 100.0 5.9E-35 2E-39 280.0 39.3 218 149-385 98-340 (343)
16 1erj_A Transcriptional repress 100.0 1.9E-34 6.4E-39 281.8 37.8 219 149-385 145-389 (393)
17 1nr0_A Actin interacting prote 100.0 1.8E-34 6.2E-39 298.2 37.5 332 3-383 187-609 (611)
18 4gqb_B Methylosome protein 50; 100.0 7.5E-35 2.6E-39 278.6 29.8 182 149-344 149-333 (344)
19 2pm7_B Protein transport prote 100.0 5.6E-34 1.9E-38 267.4 35.3 211 170-385 47-285 (297)
20 3ow8_A WD repeat-containing pr 100.0 4.9E-34 1.7E-38 270.7 32.4 244 3-341 77-320 (321)
21 3k26_A Polycomb protein EED; W 100.0 6.4E-34 2.2E-38 274.6 31.8 220 149-384 95-365 (366)
22 3dm0_A Maltose-binding peripla 100.0 9.4E-34 3.2E-38 297.4 35.6 219 149-385 452-693 (694)
23 4aow_A Guanine nucleotide-bind 100.0 6.8E-33 2.3E-37 264.8 37.4 293 3-386 35-338 (340)
24 1gxr_A ESG1, transducin-like e 100.0 8.7E-33 3E-37 263.5 38.0 216 149-384 119-336 (337)
25 2ymu_A WD-40 repeat protein; u 100.0 3E-33 1E-37 287.3 37.1 317 3-382 259-577 (577)
26 3ei3_B DNA damage-binding prot 100.0 5.9E-33 2E-37 270.2 35.5 289 3-385 70-382 (383)
27 1vyh_C Platelet-activating fac 100.0 2.5E-33 8.5E-38 275.3 32.7 177 149-341 214-410 (410)
28 2ynn_A Coatomer subunit beta'; 100.0 1E-32 3.6E-37 259.7 34.9 220 149-385 35-259 (304)
29 4h5i_A Guanine nucleotide-exch 100.0 2.3E-33 7.9E-38 271.0 28.9 229 150-385 105-343 (365)
30 3i2n_A WD repeat-containing pr 100.0 9.8E-33 3.3E-37 265.5 31.7 224 149-385 90-353 (357)
31 1sq9_A Antiviral protein SKI8; 100.0 9.8E-33 3.3E-37 269.8 31.6 227 149-385 91-395 (397)
32 1got_B GT-beta; complex (GTP-b 100.0 1.8E-32 6.2E-37 262.3 32.6 177 148-339 163-340 (340)
33 3bg1_A Protein SEC13 homolog; 100.0 2E-33 6.9E-38 266.0 25.4 207 171-385 52-293 (316)
34 2ymu_A WD-40 repeat protein; u 100.0 9E-32 3.1E-36 276.4 39.2 319 3-385 218-539 (577)
35 3vl1_A 26S proteasome regulato 100.0 6.3E-33 2.2E-37 273.3 28.4 327 6-385 56-419 (420)
36 1r5m_A SIR4-interacting protei 100.0 1.7E-32 5.8E-37 270.1 31.3 218 148-384 170-424 (425)
37 3zwl_B Eukaryotic translation 100.0 1.2E-31 4.1E-36 258.9 36.3 216 149-385 96-346 (369)
38 4e54_B DNA damage-binding prot 100.0 1.1E-33 3.8E-38 280.2 22.1 295 3-386 116-431 (435)
39 4g56_B MGC81050 protein; prote 100.0 5.5E-33 1.9E-37 267.6 26.3 182 149-345 161-346 (357)
40 4aez_A CDC20, WD repeat-contai 100.0 8.7E-32 3E-36 263.7 33.4 223 149-387 156-382 (401)
41 2pm9_A Protein WEB1, protein t 100.0 1.3E-32 4.4E-37 270.6 26.3 230 149-385 136-414 (416)
42 3iz6_a 40S ribosomal protein R 100.0 2.9E-32 1E-36 265.0 28.4 185 149-345 180-378 (380)
43 2pm9_A Protein WEB1, protein t 100.0 1.9E-32 6.5E-37 269.4 26.8 227 149-385 89-337 (416)
44 3jrp_A Fusion protein of prote 100.0 4.2E-31 1.4E-35 256.1 35.7 218 171-395 50-296 (379)
45 3frx_A Guanine nucleotide-bind 100.0 1.5E-31 5E-36 253.6 31.6 246 3-343 62-318 (319)
46 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.4E-32 2.9E-36 258.2 30.1 257 3-346 58-339 (345)
47 3f3f_A Nucleoporin SEH1; struc 100.0 5.7E-31 1.9E-35 251.7 34.3 217 171-394 52-345 (351)
48 3gre_A Serine/threonine-protei 100.0 1.7E-31 5.7E-36 264.8 31.1 201 175-382 167-437 (437)
49 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-30 4.2E-35 246.0 35.6 213 149-385 81-296 (313)
50 2pbi_B Guanine nucleotide-bind 100.0 2.5E-31 8.7E-36 255.7 31.2 177 149-339 176-354 (354)
51 3dw8_B Serine/threonine-protei 100.0 5.5E-31 1.9E-35 261.6 33.9 204 172-383 173-444 (447)
52 1k8k_C P40, ARP2/3 complex 41 100.0 3E-31 1E-35 256.7 31.1 222 149-385 74-361 (372)
53 2oaj_A Protein SNI1; WD40 repe 100.0 4.5E-31 1.6E-35 282.9 34.3 211 3-255 14-247 (902)
54 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-32 2.3E-36 271.2 26.0 228 149-385 235-517 (524)
55 1gxr_A ESG1, transducin-like e 100.0 1.1E-30 3.8E-35 248.8 33.2 220 148-385 71-296 (337)
56 2hes_X YDR267CP; beta-propelle 100.0 3E-31 1E-35 252.7 29.0 183 149-342 129-328 (330)
57 3dwl_C Actin-related protein 2 100.0 5.9E-32 2E-36 262.5 22.3 180 149-341 77-280 (377)
58 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-30 6.3E-35 277.5 34.1 219 149-385 77-302 (814)
59 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-30 5.2E-35 290.7 34.5 329 3-385 612-1034(1249)
60 4ery_A WD repeat-containing pr 100.0 1.4E-29 4.7E-34 239.2 35.5 221 149-385 45-268 (312)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.7E-30 2.3E-34 253.9 34.9 216 148-385 218-442 (445)
62 2xzm_R RACK1; ribosome, transl 100.0 1.4E-29 4.9E-34 242.5 34.5 224 149-385 49-285 (343)
63 1pgu_A Actin interacting prote 100.0 5.3E-29 1.8E-33 257.5 40.2 217 149-385 183-614 (615)
64 4aow_A Guanine nucleotide-bind 100.0 1.3E-29 4.4E-34 242.1 32.6 182 149-344 150-339 (340)
65 4gga_A P55CDC, cell division c 100.0 4.7E-29 1.6E-33 245.8 36.1 219 149-385 169-395 (420)
66 4a11_B DNA excision repair pro 100.0 7.5E-29 2.6E-33 242.7 37.1 221 148-385 121-365 (408)
67 3sfz_A APAF-1, apoptotic pepti 100.0 3.4E-30 1.1E-34 287.9 30.9 220 148-385 982-1207(1249)
68 1erj_A Transcriptional repress 100.0 8.3E-29 2.8E-33 241.8 36.7 224 148-385 84-341 (393)
69 3v7d_B Cell division control p 100.0 3.3E-29 1.1E-33 250.2 33.7 214 149-386 183-422 (464)
70 3v7d_B Cell division control p 100.0 6.3E-29 2.2E-33 248.2 35.5 218 149-383 227-461 (464)
71 4aez_A CDC20, WD repeat-contai 100.0 2.6E-29 8.9E-34 246.1 30.3 188 149-349 196-387 (401)
72 2oaj_A Protein SNI1; WD40 repe 100.0 4.4E-29 1.5E-33 267.5 34.7 207 172-386 431-733 (902)
73 2xyi_A Probable histone-bindin 100.0 1.5E-29 5.3E-34 250.0 28.7 269 3-343 125-411 (430)
74 2pm7_B Protein transport prote 100.0 5.1E-29 1.8E-33 233.6 29.0 210 170-385 3-238 (297)
75 4ggc_A P55CDC, cell division c 100.0 6.4E-28 2.2E-32 228.0 36.4 219 149-385 89-315 (318)
76 1r5m_A SIR4-interacting protei 100.0 3.6E-29 1.2E-33 246.3 28.6 179 148-341 226-424 (425)
77 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-28 4.3E-33 243.9 32.4 208 149-385 193-414 (435)
78 4gq1_A NUP37; propeller, trans 100.0 1.2E-28 4.1E-33 240.5 31.6 227 149-385 111-389 (393)
79 1yfq_A Cell cycle arrest prote 100.0 7.2E-29 2.5E-33 237.1 29.3 206 149-377 79-315 (342)
80 3jro_A Fusion protein of prote 100.0 1.8E-29 6.2E-34 266.6 27.5 209 171-385 48-285 (753)
81 2j04_A TAU60, YPL007P, hypothe 100.0 5.4E-29 1.8E-33 244.4 27.3 192 174-384 83-296 (588)
82 3vl1_A 26S proteasome regulato 100.0 9E-29 3.1E-33 243.6 29.1 220 148-385 118-365 (420)
83 3dm0_A Maltose-binding peripla 100.0 1.8E-28 6.1E-33 257.3 31.1 224 148-385 404-632 (694)
84 1sq9_A Antiviral protein SKI8; 100.0 1.8E-28 6.1E-33 239.5 28.9 186 149-344 148-397 (397)
85 1pgu_A Actin interacting prote 100.0 6.3E-28 2.1E-32 249.4 34.5 329 3-383 15-364 (615)
86 4gga_A P55CDC, cell division c 100.0 3.6E-28 1.2E-32 239.5 30.6 183 150-346 210-399 (420)
87 3ei3_B DNA damage-binding prot 100.0 9.2E-29 3.2E-33 240.6 25.3 182 149-342 185-382 (383)
88 2xyi_A Probable histone-bindin 100.0 5.8E-28 2E-32 238.7 31.2 229 150-385 152-410 (430)
89 3mmy_A MRNA export factor; mRN 100.0 4.3E-28 1.5E-32 233.8 29.2 218 149-385 108-346 (368)
90 3lrv_A PRE-mRNA-splicing facto 100.0 3.4E-28 1.2E-32 232.9 27.8 214 150-385 105-333 (343)
91 3i2n_A WD repeat-containing pr 100.0 3.3E-28 1.1E-32 233.8 27.7 184 149-344 139-355 (357)
92 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-28 7E-33 245.9 26.6 226 148-385 182-428 (524)
93 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-27 4.8E-32 229.7 30.3 214 150-386 82-337 (355)
94 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-27 6.3E-32 236.6 32.2 224 148-386 124-392 (450)
95 3k26_A Polycomb protein EED; W 100.0 1.2E-28 4.2E-33 237.5 21.9 179 149-342 138-366 (366)
96 3dwl_C Actin-related protein 2 100.0 1.3E-28 4.6E-33 238.8 21.7 225 149-385 33-281 (377)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 9.8E-28 3.3E-32 235.0 28.0 236 147-394 55-308 (402)
98 3bg1_A Protein SEC13 homolog; 100.0 1.9E-28 6.3E-33 231.9 22.1 209 171-385 8-247 (316)
99 1k8k_C P40, ARP2/3 complex 41 100.0 4.6E-27 1.6E-31 227.2 32.0 222 149-385 30-274 (372)
100 3zwl_B Eukaryotic translation 100.0 7.3E-27 2.5E-31 225.2 33.1 186 149-344 142-348 (369)
101 4a11_B DNA excision repair pro 100.0 1.8E-27 6.3E-32 232.8 29.0 216 149-384 166-404 (408)
102 4e54_B DNA damage-binding prot 100.0 1.9E-28 6.6E-33 242.5 22.2 211 169-386 112-328 (435)
103 3gre_A Serine/threonine-protei 100.0 1.4E-27 4.9E-32 236.4 27.6 177 149-339 192-437 (437)
104 3jrp_A Fusion protein of prote 100.0 3.4E-27 1.2E-31 228.5 28.5 213 168-386 3-241 (379)
105 3odt_A Protein DOA1; ubiquitin 100.0 9.4E-27 3.2E-31 219.3 30.5 175 149-346 124-300 (313)
106 4ggc_A P55CDC, cell division c 100.0 1.9E-26 6.6E-31 217.8 29.9 181 150-344 130-317 (318)
107 4h5i_A Guanine nucleotide-exch 100.0 2.5E-27 8.5E-32 228.7 23.4 178 149-343 157-344 (365)
108 1p22_A F-BOX/WD-repeat protein 100.0 9.6E-27 3.3E-31 230.4 27.4 298 3-366 130-434 (435)
109 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-26 8.9E-31 245.4 32.8 220 149-385 35-259 (814)
110 2w18_A PALB2, fancn, partner a 100.0 9.6E-27 3.3E-31 214.9 23.8 174 149-340 157-355 (356)
111 3bws_A Protein LP49; two-domai 100.0 9.2E-26 3.2E-30 223.0 32.7 217 149-385 191-432 (433)
112 3lrv_A PRE-mRNA-splicing facto 100.0 2.1E-26 7.3E-31 220.4 26.6 220 149-387 58-294 (343)
113 1yfq_A Cell cycle arrest prote 100.0 2.9E-26 1E-30 219.0 26.8 221 148-385 32-282 (342)
114 3dw8_B Serine/threonine-protei 99.9 1.8E-26 6E-31 229.1 24.5 229 149-385 50-373 (447)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.2E-25 7.4E-30 221.6 31.8 202 174-383 100-337 (450)
116 1l0q_A Surface layer protein; 99.9 1E-24 3.4E-29 212.5 33.6 216 149-385 54-275 (391)
117 2w18_A PALB2, fancn, partner a 99.9 3.5E-25 1.2E-29 204.5 27.1 228 143-383 57-355 (356)
118 4gq1_A NUP37; propeller, trans 99.9 7.6E-26 2.6E-30 220.7 23.2 179 149-341 166-388 (393)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.7E-24 9.3E-29 213.4 34.1 214 149-386 179-392 (445)
120 3f3f_A Nucleoporin SEH1; struc 99.9 8.8E-25 3E-29 208.6 28.9 208 170-385 5-249 (351)
121 2j04_A TAU60, YPL007P, hypothe 99.9 4.8E-26 1.6E-30 223.6 19.8 203 148-375 106-349 (588)
122 3jro_A Fusion protein of prote 99.9 3.2E-25 1.1E-29 234.1 26.4 211 170-386 3-239 (753)
123 3mmy_A MRNA export factor; mRN 99.9 3E-24 1E-28 206.8 28.2 221 149-385 64-304 (368)
124 3bws_A Protein LP49; two-domai 99.9 6.3E-24 2.2E-28 209.8 29.7 224 150-385 145-390 (433)
125 1l0q_A Surface layer protein; 99.9 1.5E-23 5.1E-28 204.2 31.9 184 149-349 96-282 (391)
126 3vu4_A KMHSV2; beta-propeller 99.9 1.9E-23 6.4E-28 200.8 25.1 208 167-385 10-271 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-22 8.6E-27 197.0 31.2 213 150-385 160-387 (415)
128 1nir_A Nitrite reductase; hemo 99.9 5.1E-21 1.8E-25 193.6 31.1 224 149-385 248-514 (543)
129 1ri6_A Putative isomerase YBHE 99.9 2.8E-20 9.6E-25 177.2 33.4 235 149-394 60-317 (343)
130 3u4y_A Uncharacterized protein 99.9 4.3E-20 1.5E-24 175.3 31.3 223 150-385 63-304 (331)
131 3vgz_A Uncharacterized protein 99.9 5.9E-20 2E-24 175.9 31.6 205 149-373 111-330 (353)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-19 3.8E-24 192.1 32.6 217 139-374 162-442 (741)
133 1ri6_A Putative isomerase YBHE 99.9 2.4E-19 8.1E-24 170.8 31.4 211 149-368 106-334 (343)
134 1nir_A Nitrite reductase; hemo 99.9 2.2E-19 7.6E-24 181.6 32.3 221 149-385 159-402 (543)
135 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-19 3.6E-24 178.3 29.0 197 150-368 204-409 (415)
136 3u4y_A Uncharacterized protein 99.9 2.3E-19 7.8E-24 170.4 27.5 223 149-385 20-252 (331)
137 3hfq_A Uncharacterized protein 99.9 1.4E-18 4.9E-23 166.1 32.4 236 149-394 63-326 (347)
138 2oit_A Nucleoporin 214KDA; NH2 99.8 1.8E-19 6.2E-24 177.3 24.8 189 149-342 118-333 (434)
139 3scy_A Hypothetical bacterial 99.8 2E-17 6.8E-22 159.1 35.1 211 149-365 120-360 (361)
140 1xfd_A DIP, dipeptidyl aminope 99.8 2E-18 6.9E-23 181.9 30.6 219 142-373 127-426 (723)
141 2ojh_A Uncharacterized protein 99.8 1.7E-18 5.7E-23 160.9 26.3 216 150-385 23-258 (297)
142 2z3z_A Dipeptidyl aminopeptida 99.8 3.7E-18 1.3E-22 179.4 31.6 196 179-385 183-435 (706)
143 2oit_A Nucleoporin 214KDA; NH2 99.8 3.6E-19 1.2E-23 175.2 22.3 162 175-343 91-279 (434)
144 3o4h_A Acylamino-acid-releasin 99.8 8.8E-19 3E-23 179.8 25.3 185 179-385 112-313 (582)
145 3vgz_A Uncharacterized protein 99.8 1E-17 3.5E-22 160.2 29.9 220 148-385 68-303 (353)
146 1pby_B Quinohemoprotein amine 99.8 4.4E-18 1.5E-22 161.5 26.5 212 150-385 57-310 (337)
147 2ojh_A Uncharacterized protein 99.8 1.1E-17 3.7E-22 155.4 25.1 155 178-333 130-294 (297)
148 1k32_A Tricorn protease; prote 99.8 1E-17 3.5E-22 183.4 28.4 216 150-387 359-639 (1045)
149 1k32_A Tricorn protease; prote 99.8 1.9E-16 6.4E-21 173.4 37.4 184 142-341 310-501 (1045)
150 2ecf_A Dipeptidyl peptidase IV 99.8 2.7E-17 9.3E-22 173.8 24.7 202 178-385 110-367 (741)
151 3hfq_A Uncharacterized protein 99.8 2.1E-16 7E-21 151.0 28.2 208 173-385 36-271 (347)
152 2z3z_A Dipeptidyl aminopeptida 99.8 6.1E-17 2.1E-21 170.1 23.4 203 177-385 82-342 (706)
153 3scy_A Hypothetical bacterial 99.8 1.4E-15 4.9E-20 146.1 30.8 224 149-385 75-337 (361)
154 1jmx_B Amine dehydrogenase; ox 99.8 3.6E-16 1.2E-20 149.1 26.3 214 149-385 21-325 (349)
155 1pby_B Quinohemoprotein amine 99.7 1.1E-16 3.7E-21 151.8 21.6 217 149-385 11-269 (337)
156 1xfd_A DIP, dipeptidyl aminope 99.7 1.9E-16 6.7E-21 166.7 22.6 225 150-385 92-393 (723)
157 1jof_A Carboxy-CIS,CIS-muconat 99.7 9.7E-15 3.3E-19 140.5 32.0 187 149-343 119-342 (365)
158 1jmx_B Amine dehydrogenase; ox 99.7 8.7E-16 3E-20 146.4 23.0 176 149-346 65-329 (349)
159 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.5E-15 1.5E-19 142.8 26.6 240 142-393 53-347 (365)
160 1z68_A Fibroblast activation p 99.7 2.8E-15 9.6E-20 157.8 26.1 239 141-385 122-443 (719)
161 3pe7_A Oligogalacturonate lyas 99.7 5.3E-15 1.8E-19 143.4 26.2 223 150-385 103-382 (388)
162 3fvz_A Peptidyl-glycine alpha- 99.7 3.3E-14 1.1E-18 134.7 30.0 223 150-385 70-322 (329)
163 1q7f_A NHL, brain tumor CG1071 99.7 2.1E-13 7.1E-18 126.3 30.8 188 140-345 88-283 (286)
164 3azo_A Aminopeptidase; POP fam 99.6 2.1E-13 7.1E-18 142.1 31.6 195 175-385 128-367 (662)
165 4a5s_A Dipeptidyl peptidase 4 99.6 4.2E-14 1.5E-18 149.1 26.2 220 150-385 93-398 (740)
166 3o4h_A Acylamino-acid-releasin 99.6 1.6E-14 5.6E-19 148.0 22.4 212 148-383 43-274 (582)
167 1z68_A Fibroblast activation p 99.6 3.2E-15 1.1E-19 157.4 17.3 224 149-384 36-343 (719)
168 4a5s_A Dipeptidyl peptidase 4 99.6 2.8E-14 9.5E-19 150.4 24.1 234 141-385 28-353 (740)
169 1q7f_A NHL, brain tumor CG1071 99.6 8.7E-13 3E-17 122.1 30.1 217 149-385 51-280 (286)
170 3pe7_A Oligogalacturonate lyas 99.6 1.1E-13 3.8E-18 134.1 24.7 223 150-385 61-329 (388)
171 3c5m_A Oligogalacturonate lyas 99.6 1.5E-13 5.3E-18 133.3 20.0 194 182-385 147-382 (396)
172 2dg1_A DRP35, lactonase; beta 99.6 3.1E-12 1E-16 121.2 28.4 221 150-385 67-314 (333)
173 2oiz_A Aromatic amine dehydrog 99.6 1.6E-12 5.4E-17 124.6 26.4 217 150-385 32-334 (361)
174 2xdw_A Prolyl endopeptidase; a 99.5 1.6E-12 5.6E-17 136.3 27.0 221 150-385 152-414 (710)
175 3fvz_A Peptidyl-glycine alpha- 99.5 4.7E-12 1.6E-16 119.8 27.0 203 176-385 23-277 (329)
176 1qks_A Cytochrome CD1 nitrite 99.5 1.4E-11 4.6E-16 124.4 31.2 222 149-385 177-421 (567)
177 3azo_A Aminopeptidase; POP fam 99.5 8E-13 2.7E-17 137.6 23.1 224 150-385 48-323 (662)
178 2oiz_A Aromatic amine dehydrog 99.5 5.5E-12 1.9E-16 120.8 25.1 202 149-369 131-360 (361)
179 2dg1_A DRP35, lactonase; beta 99.5 1E-11 3.6E-16 117.5 26.7 210 167-384 35-262 (333)
180 3no2_A Uncharacterized protein 99.5 1.4E-11 5E-16 113.0 26.3 216 149-385 15-251 (276)
181 3dsm_A Uncharacterized protein 99.5 4.6E-11 1.6E-15 112.8 29.0 213 149-384 64-301 (328)
182 3e5z_A Putative gluconolactona 99.5 1.9E-11 6.5E-16 113.7 25.6 205 170-384 21-245 (296)
183 2z2n_A Virginiamycin B lyase; 99.5 8.3E-10 2.9E-14 102.3 36.6 197 175-385 97-295 (299)
184 3c5m_A Oligogalacturonate lyas 99.5 7.7E-13 2.6E-17 128.3 16.2 217 150-385 61-329 (396)
185 3dsm_A Uncharacterized protein 99.5 3.1E-11 1.1E-15 114.0 25.5 222 149-385 17-253 (328)
186 1rwi_B Serine/threonine-protei 99.4 2.4E-11 8.3E-16 111.1 23.8 216 149-385 46-264 (270)
187 2gop_A Trilobed protease; beta 99.4 3.5E-11 1.2E-15 114.5 24.5 201 149-385 43-291 (347)
188 2bkl_A Prolyl endopeptidase; m 99.4 1.9E-11 6.7E-16 127.8 24.6 185 150-345 203-400 (695)
189 3e5z_A Putative gluconolactona 99.4 2E-10 7E-15 106.6 27.3 210 149-385 50-284 (296)
190 2xdw_A Prolyl endopeptidase; a 99.4 5.5E-11 1.9E-15 124.7 26.1 204 174-384 122-365 (710)
191 1rwi_B Serine/threonine-protei 99.4 1.2E-10 4.1E-15 106.5 25.3 180 149-345 87-267 (270)
192 1xip_A Nucleoporin NUP159; bet 99.4 6.4E-12 2.2E-16 119.6 15.9 173 178-373 39-230 (388)
193 2gop_A Trilobed protease; beta 99.4 2.9E-10 1E-14 108.0 26.9 204 150-384 86-330 (347)
194 3hrp_A Uncharacterized protein 99.4 1.1E-09 3.6E-14 106.6 30.5 228 139-383 140-406 (409)
195 2bkl_A Prolyl endopeptidase; m 99.4 8.1E-11 2.8E-15 123.1 24.0 201 174-385 118-349 (695)
196 2qc5_A Streptogramin B lactona 99.4 8.2E-09 2.8E-13 95.5 35.0 213 150-384 84-297 (300)
197 3no2_A Uncharacterized protein 99.3 1.2E-10 4E-15 106.9 21.4 183 190-385 6-193 (276)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.1E-09 3.6E-14 102.5 27.9 222 148-385 45-299 (314)
199 2z2n_A Virginiamycin B lyase; 99.3 5.8E-09 2E-13 96.5 32.1 215 149-383 36-253 (299)
200 1yr2_A Prolyl oligopeptidase; 99.3 1E-09 3.4E-14 115.7 29.8 218 150-385 190-441 (741)
201 2mad_H Methylamine dehydrogena 99.3 2.5E-09 8.5E-14 102.5 29.5 212 150-385 48-350 (373)
202 1qks_A Cytochrome CD1 nitrite 99.3 5.7E-10 1.9E-14 112.6 25.3 188 190-385 168-373 (567)
203 2qc5_A Streptogramin B lactona 99.2 5.6E-08 1.9E-12 89.9 31.3 215 149-383 41-258 (300)
204 3hrp_A Uncharacterized protein 99.2 5.4E-09 1.8E-13 101.6 24.6 198 177-384 131-351 (409)
205 3g4e_A Regucalcin; six bladed 99.2 1.2E-08 4.2E-13 94.6 26.0 199 149-369 35-254 (297)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.8E-08 6.1E-13 94.1 27.3 189 141-342 83-299 (314)
207 1xip_A Nucleoporin NUP159; bet 99.2 7.8E-10 2.7E-14 105.3 16.9 170 138-327 47-230 (388)
208 3iuj_A Prolyl endopeptidase; h 99.2 6.3E-09 2.1E-13 108.6 25.4 184 150-345 209-408 (693)
209 3c75_H MADH, methylamine dehyd 99.1 8.4E-09 2.9E-13 99.6 23.5 219 150-385 100-402 (426)
210 1yr2_A Prolyl oligopeptidase; 99.1 1.1E-08 3.7E-13 107.7 25.2 203 174-385 160-393 (741)
211 3dr2_A Exported gluconolactona 99.1 2.7E-08 9.1E-13 92.7 23.8 203 172-383 40-265 (305)
212 2ece_A 462AA long hypothetical 99.1 2E-08 6.7E-13 95.9 21.9 217 149-375 106-399 (462)
213 3sjl_D Methylamine dehydrogena 99.1 6.7E-08 2.3E-12 91.6 25.5 223 149-392 109-369 (386)
214 3g4e_A Regucalcin; six bladed 99.1 1.7E-07 5.8E-12 86.9 28.0 204 175-385 11-229 (297)
215 2qe8_A Uncharacterized protein 99.1 2.5E-08 8.6E-13 94.6 22.2 195 174-375 64-309 (343)
216 3iuj_A Prolyl endopeptidase; h 99.1 4.9E-08 1.7E-12 101.8 26.1 217 150-385 156-405 (693)
217 2ghs_A AGR_C_1268P; regucalcin 99.0 2.3E-07 7.8E-12 87.2 27.4 198 149-370 71-285 (326)
218 3sjl_D Methylamine dehydrogena 99.0 1.4E-07 4.7E-12 89.5 24.8 201 150-372 60-295 (386)
219 2mad_H Methylamine dehydrogena 99.0 7.8E-07 2.7E-11 85.1 29.6 184 149-348 148-356 (373)
220 2ghs_A AGR_C_1268P; regucalcin 99.0 4.9E-07 1.7E-11 84.9 27.6 195 179-383 51-258 (326)
221 1npe_A Nidogen, entactin; glyc 98.9 2.9E-06 9.9E-11 77.1 30.6 225 148-385 9-238 (267)
222 2ece_A 462AA long hypothetical 98.9 2E-07 6.8E-12 89.1 23.0 198 186-385 93-352 (462)
223 2iwa_A Glutamine cyclotransfer 98.9 6.9E-07 2.3E-11 80.1 25.2 194 179-384 23-234 (266)
224 2qe8_A Uncharacterized protein 98.9 5E-08 1.7E-12 92.5 18.8 205 177-383 17-276 (343)
225 1mda_H Methylamine dehydrogena 98.9 4.3E-08 1.5E-12 93.0 18.0 214 150-385 47-346 (368)
226 2hz6_A Endoplasmic reticulum t 98.9 7.6E-10 2.6E-14 106.2 4.6 192 149-369 19-216 (369)
227 1fwx_A Nitrous oxide reductase 98.9 7.4E-08 2.5E-12 95.3 18.4 209 150-374 113-405 (595)
228 3dr2_A Exported gluconolactona 98.9 2.6E-07 9E-12 85.9 21.6 201 149-375 67-296 (305)
229 2iwa_A Glutamine cyclotransfer 98.9 1.1E-06 3.8E-11 78.8 24.5 180 149-344 44-239 (266)
230 3nol_A Glutamine cyclotransfer 98.9 6.5E-07 2.2E-11 79.3 22.1 194 179-385 45-254 (262)
231 1yiq_A Quinohemoprotein alcoho 98.8 3.2E-06 1.1E-10 87.6 29.7 186 181-373 239-534 (689)
232 1npe_A Nidogen, entactin; glyc 98.8 1.5E-05 5.1E-10 72.3 30.6 212 140-369 47-263 (267)
233 2hz6_A Endoplasmic reticulum t 98.8 7.3E-10 2.5E-14 106.3 1.3 146 190-348 10-155 (369)
234 3mbr_X Glutamine cyclotransfer 98.8 2.3E-06 8E-11 75.1 23.0 195 178-385 22-233 (243)
235 3nok_A Glutaminyl cyclase; bet 98.8 1.3E-06 4.5E-11 77.3 20.6 191 179-384 57-263 (268)
236 1ijq_A LDL receptor, low-densi 98.7 3E-05 1E-09 72.3 30.4 222 147-384 8-235 (316)
237 3qqz_A Putative uncharacterize 98.7 3.1E-05 1.1E-09 68.9 27.8 209 171-385 21-251 (255)
238 3v64_C Agrin; beta propeller, 98.7 3.2E-05 1.1E-09 73.1 29.8 224 143-384 47-272 (349)
239 1fwx_A Nitrous oxide reductase 98.7 7E-07 2.4E-11 88.4 18.0 196 186-385 99-361 (595)
240 3v65_B Low-density lipoprotein 98.7 2.4E-05 8.2E-10 75.1 28.2 226 141-384 88-315 (386)
241 3nol_A Glutamine cyclotransfer 98.7 4.5E-06 1.6E-10 73.9 21.0 164 150-331 66-245 (262)
242 3c75_H MADH, methylamine dehyd 98.6 2.5E-06 8.7E-11 82.3 18.6 190 186-385 82-295 (426)
243 3p5b_L Low density lipoprotein 98.6 0.00012 4E-09 70.6 30.5 227 143-384 86-317 (400)
244 3mbr_X Glutamine cyclotransfer 98.6 2.5E-05 8.5E-10 68.6 23.2 165 150-331 44-224 (243)
245 3nok_A Glutaminyl cyclase; bet 98.6 1.5E-05 5E-10 70.7 21.5 165 150-331 76-255 (268)
246 1kb0_A Quinohemoprotein alcoho 98.6 8.7E-06 3E-10 84.2 23.1 187 180-373 246-536 (677)
247 1yiq_A Quinohemoprotein alcoho 98.5 6.2E-06 2.1E-10 85.5 20.8 184 197-387 181-507 (689)
248 2fp8_A Strictosidine synthase; 98.5 5.8E-05 2E-09 70.5 25.2 197 178-385 20-267 (322)
249 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00029 9.8E-09 67.2 29.6 179 190-385 144-337 (376)
250 2p4o_A Hypothetical protein; p 98.4 4.9E-05 1.7E-09 70.4 22.5 197 177-385 32-240 (306)
251 1kb0_A Quinohemoprotein alcoho 98.4 9.1E-06 3.1E-10 84.1 19.2 183 198-387 189-509 (677)
252 3hxj_A Pyrrolo-quinoline quino 98.4 1.8E-05 6.1E-10 74.0 19.7 207 149-385 117-324 (330)
253 1kv9_A Type II quinohemoprotei 98.4 0.00026 8.8E-09 73.1 27.9 166 180-350 233-496 (668)
254 1ijq_A LDL receptor, low-densi 98.4 0.0013 4.4E-08 61.1 30.1 166 177-349 77-245 (316)
255 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00015 5.2E-09 69.2 24.4 180 190-385 104-296 (376)
256 3sov_A LRP-6, low-density lipo 98.3 0.00059 2E-08 63.4 27.4 221 148-383 12-236 (318)
257 3m0c_C LDL receptor, low-densi 98.3 0.00062 2.1E-08 71.1 30.2 228 142-384 397-629 (791)
258 2p4o_A Hypothetical protein; p 98.3 0.00073 2.5E-08 62.4 27.3 183 177-369 72-270 (306)
259 4hw6_A Hypothetical protein, I 98.3 0.00016 5.6E-09 70.3 23.3 201 178-385 140-372 (433)
260 1mda_H Methylamine dehydrogena 98.3 6.1E-06 2.1E-10 78.2 12.7 140 190-342 33-194 (368)
261 3kya_A Putative phosphatase; s 98.3 0.00047 1.6E-08 67.4 26.1 160 178-342 140-341 (496)
262 2fp8_A Strictosidine synthase; 98.3 0.00064 2.2E-08 63.3 25.8 195 177-385 80-313 (322)
263 4hw6_A Hypothetical protein, I 98.3 0.00049 1.7E-08 66.9 25.7 228 140-383 152-429 (433)
264 3v64_C Agrin; beta propeller, 98.2 0.0027 9.4E-08 59.7 29.8 196 139-349 83-282 (349)
265 3v65_B Low-density lipoprotein 98.2 0.0024 8.2E-08 61.1 29.6 197 139-350 126-326 (386)
266 3p5b_L Low density lipoprotein 98.2 0.0046 1.6E-07 59.4 32.5 202 139-349 122-327 (400)
267 3tc9_A Hypothetical hydrolase; 98.2 0.0004 1.4E-08 67.5 24.1 156 178-342 138-301 (430)
268 3tc9_A Hypothetical hydrolase; 98.2 0.00091 3.1E-08 65.0 26.5 229 140-383 149-426 (430)
269 2xe4_A Oligopeptidase B; hydro 98.1 0.00017 5.8E-09 75.7 20.9 204 174-384 170-397 (751)
270 4a2l_A BT_4663, two-component 98.1 0.01 3.6E-07 62.6 34.5 195 176-385 405-614 (795)
271 3m0c_C LDL receptor, low-densi 98.1 0.0083 2.8E-07 62.7 32.8 202 140-350 435-640 (791)
272 3hxj_A Pyrrolo-quinoline quino 98.1 0.00017 5.9E-09 67.2 18.3 174 190-383 108-282 (330)
273 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0099 3.4E-07 60.6 31.5 219 149-384 15-234 (628)
274 1k3i_A Galactose oxidase precu 98.0 0.00036 1.2E-08 72.1 21.0 213 150-375 266-529 (656)
275 4a2l_A BT_4663, two-component 98.0 0.023 8E-07 59.9 35.4 194 176-383 356-569 (795)
276 1kv9_A Type II quinohemoprotei 98.0 0.00011 3.7E-09 76.0 15.4 182 198-386 177-489 (668)
277 3s94_A LRP-6, low-density lipo 97.9 0.004 1.4E-07 63.4 26.2 221 149-384 18-240 (619)
278 3sov_A LRP-6, low-density lipo 97.9 0.014 4.8E-07 54.0 30.3 196 140-349 46-245 (318)
279 1k3i_A Galactose oxidase precu 97.9 0.00099 3.4E-08 68.7 21.4 226 150-385 220-497 (656)
280 1n7d_A LDL receptor, low-densi 97.9 2.3E-05 8E-10 81.2 9.1 199 177-383 406-610 (699)
281 2ad6_A Methanol dehydrogenase 97.8 0.0031 1E-07 63.7 23.1 146 200-350 273-502 (571)
282 2p9w_A MAL S 1 allergenic prot 97.8 0.0028 9.7E-08 58.0 20.4 158 179-342 15-215 (334)
283 3v9f_A Two-component system se 97.8 0.038 1.3E-06 58.1 32.5 220 148-384 382-610 (781)
284 3s94_A LRP-6, low-density lipo 97.8 0.031 1E-06 56.9 30.4 229 143-385 320-549 (619)
285 3amr_A 3-phytase; beta-propell 97.8 0.0064 2.2E-07 56.2 22.6 175 150-341 51-262 (355)
286 2xe4_A Oligopeptidase B; hydro 97.8 0.0046 1.6E-07 64.8 24.6 184 150-344 248-460 (751)
287 2g8s_A Glucose/sorbosone dehyd 97.8 0.024 8.1E-07 53.3 28.2 203 176-385 65-352 (353)
288 1w6s_A Methanol dehydrogenase 97.8 0.0048 1.7E-07 62.4 23.0 181 182-370 246-529 (599)
289 2ad6_A Methanol dehydrogenase 97.8 0.0021 7.3E-08 64.8 20.4 182 198-386 175-495 (571)
290 1n7d_A LDL receptor, low-densi 97.7 0.00037 1.3E-08 72.2 14.3 161 179-346 455-618 (699)
291 3qqz_A Putative uncharacterize 97.7 0.027 9.2E-07 49.9 24.5 165 214-385 21-202 (255)
292 2ism_A Putative oxidoreductase 97.7 0.0096 3.3E-07 56.0 22.1 189 176-375 74-333 (352)
293 3sre_A PON1, serum paraoxonase 97.6 0.021 7.3E-07 53.3 23.7 170 197-373 81-283 (355)
294 3ei3_A DNA damage-binding prot 97.6 0.12 4.2E-06 56.4 36.9 175 200-385 808-999 (1158)
295 1flg_A Protein (quinoprotein e 97.6 0.0064 2.2E-07 61.4 20.8 168 199-373 291-545 (582)
296 3a9g_A Putative uncharacterize 97.5 0.042 1.4E-06 51.6 24.6 203 176-385 72-350 (354)
297 3kya_A Putative phosphatase; s 97.5 0.078 2.7E-06 51.8 30.0 235 140-385 151-475 (496)
298 1w6s_A Methanol dehydrogenase 97.5 0.011 3.8E-07 59.7 21.6 152 192-349 124-349 (599)
299 3v9f_A Two-component system se 97.5 0.067 2.3E-06 56.3 27.7 185 176-374 362-556 (781)
300 2p9w_A MAL S 1 allergenic prot 97.5 0.032 1.1E-06 51.1 21.5 159 178-342 64-265 (334)
301 4a0p_A LRP6, LRP-6, low-densit 97.4 0.14 4.8E-06 52.1 31.2 200 177-385 340-547 (628)
302 3amr_A 3-phytase; beta-propell 97.4 0.011 3.8E-07 54.6 17.8 149 230-385 39-208 (355)
303 2xbg_A YCF48-like protein; pho 97.3 0.063 2.2E-06 49.8 22.7 192 177-384 122-319 (327)
304 1flg_A Protein (quinoprotein e 97.3 0.019 6.4E-07 58.0 19.8 134 191-331 338-549 (582)
305 3ii7_A Kelch-like protein 7; p 97.2 0.13 4.5E-06 46.9 23.9 182 148-344 23-227 (306)
306 2vpj_A Kelch-like protein 12; 97.2 0.14 4.7E-06 46.6 24.7 147 190-344 64-233 (301)
307 2ism_A Putative oxidoreductase 96.8 0.32 1.1E-05 45.5 24.4 150 178-333 32-224 (352)
308 1zgk_A Kelch-like ECH-associat 96.8 0.24 8.1E-06 45.3 21.2 148 190-344 72-242 (308)
309 2vpj_A Kelch-like protein 12; 96.7 0.16 5.6E-06 46.1 19.0 181 149-344 78-280 (301)
310 3sre_A PON1, serum paraoxonase 96.7 0.28 9.7E-06 45.7 20.4 179 149-339 83-295 (355)
311 3das_A Putative oxidoreductase 96.6 0.18 6.1E-06 46.9 18.3 158 213-374 25-219 (347)
312 4asc_A Kelch repeat and BTB do 96.5 0.45 1.6E-05 43.5 23.2 183 144-344 8-223 (315)
313 2xzh_A Clathrin heavy chain 1; 96.5 0.31 1.1E-05 44.4 18.6 134 199-344 49-191 (365)
314 3ii7_A Kelch-like protein 7; p 96.4 0.2 6.8E-06 45.7 17.6 147 190-344 103-274 (306)
315 2xn4_A Kelch-like protein 2; s 96.4 0.55 1.9E-05 42.5 21.1 145 190-344 110-278 (302)
316 2xbg_A YCF48-like protein; pho 96.3 0.63 2.2E-05 42.9 22.6 155 173-339 159-319 (327)
317 3a9g_A Putative uncharacterize 96.3 0.69 2.4E-05 43.2 23.9 148 178-329 30-215 (354)
318 2xzh_A Clathrin heavy chain 1; 96.2 0.75 2.6E-05 41.9 29.0 185 150-348 88-296 (365)
319 2xn4_A Kelch-like protein 2; s 96.1 0.78 2.7E-05 41.5 23.3 148 190-344 63-231 (302)
320 3pbp_A Nucleoporin NUP82; beta 96.1 0.97 3.3E-05 42.8 20.1 157 230-399 31-220 (452)
321 1bpo_A Protein (clathrin); cla 96.0 1.1 3.8E-05 42.6 27.5 201 149-366 86-310 (494)
322 1cru_A Protein (soluble quinop 95.9 0.71 2.4E-05 44.8 19.6 111 219-329 26-162 (454)
323 1xi4_A Clathrin heavy chain; a 95.9 1.3 4.5E-05 48.6 22.3 183 150-346 87-293 (1630)
324 2woz_A Kelch repeat and BTB do 95.7 1.2 4E-05 40.8 22.0 181 149-344 24-233 (318)
325 3pbp_A Nucleoporin NUP82; beta 95.5 1.8 6.2E-05 41.0 20.6 144 138-293 30-208 (452)
326 1zgk_A Kelch-like ECH-associat 95.4 1.1 3.9E-05 40.6 18.2 145 190-344 123-289 (308)
327 1cru_A Protein (soluble quinop 95.3 2.3 7.7E-05 41.2 22.3 164 178-344 28-261 (454)
328 1bpo_A Protein (clathrin); cla 94.9 2.7 9.1E-05 40.0 25.5 200 119-345 106-334 (494)
329 4asc_A Kelch repeat and BTB do 94.9 0.73 2.5E-05 42.1 15.1 105 190-298 100-222 (315)
330 1tl2_A L10, protein (tachylect 94.3 0.75 2.6E-05 39.3 12.1 148 178-341 42-207 (236)
331 2g8s_A Glucose/sorbosone dehyd 94.3 3.5 0.00012 38.3 21.0 147 178-328 19-214 (353)
332 1tl2_A L10, protein (tachylect 94.2 2.3 7.9E-05 36.3 17.1 181 190-385 5-208 (236)
333 2uvk_A YJHT; unknown function, 94.2 3.4 0.00012 38.2 18.4 139 199-346 168-346 (357)
334 4gq2_M Nucleoporin NUP120; bet 94.2 3.1 0.00011 44.5 19.7 76 221-296 237-316 (950)
335 2zwa_A Leucine carboxyl methyl 94.1 3.3 0.00011 42.6 19.3 152 187-345 451-638 (695)
336 2uvk_A YJHT; unknown function, 93.9 4 0.00014 37.7 19.6 49 190-240 67-128 (357)
337 3das_A Putative oxidoreductase 93.6 4.5 0.00015 37.4 23.9 166 177-344 32-235 (347)
338 3ei3_A DNA damage-binding prot 93.4 11 0.00038 41.2 35.3 223 140-385 483-724 (1158)
339 2zwa_A Leucine carboxyl methyl 93.1 5.4 0.00018 41.0 18.7 151 190-344 399-579 (695)
340 2woz_A Kelch repeat and BTB do 92.7 5.6 0.00019 36.0 19.5 107 190-299 111-233 (318)
341 1xi4_A Clathrin heavy chain; a 92.6 6.5 0.00022 43.4 18.6 219 150-386 49-290 (1630)
342 3s25_A Hypothetical 7-bladed b 89.4 12 0.00041 33.8 18.1 176 182-385 58-253 (302)
343 3sbq_A Nitrous-oxide reductase 89.1 2.9 9.8E-05 41.1 10.8 95 243-343 300-409 (638)
344 3s25_A Hypothetical 7-bladed b 88.9 13 0.00044 33.6 19.0 175 186-385 23-214 (302)
345 3sbq_A Nitrous-oxide reductase 88.0 22 0.00075 35.1 19.6 192 190-385 143-408 (638)
346 4hvt_A Ritya.17583.B, post-pro 87.5 28 0.00095 35.7 19.7 203 179-385 131-381 (711)
347 2wg3_C Hedgehog-interacting pr 85.0 16 0.00054 35.3 13.9 104 265-373 16-155 (463)
348 2be1_A Serine/threonine-protei 83.9 3.6 0.00012 37.9 8.3 109 190-302 11-135 (339)
349 2be1_A Serine/threonine-protei 77.0 4.6 0.00016 37.2 6.5 116 232-351 11-139 (339)
350 4fhn_B Nucleoporin NUP120; pro 74.2 11 0.00037 41.3 9.7 39 221-259 239-277 (1139)
351 3q6k_A 43.2 kDa salivary prote 71.6 66 0.0022 30.0 21.4 140 200-342 124-306 (381)
352 2wg3_C Hedgehog-interacting pr 69.5 82 0.0028 30.3 27.8 29 357-385 336-371 (463)
353 3q6k_A 43.2 kDa salivary prote 69.3 73 0.0025 29.6 21.2 143 150-297 124-306 (381)
354 3f7f_A Nucleoporin NUP120; nuc 68.6 22 0.00077 36.1 9.6 37 221-259 223-259 (729)
355 3no0_A DNA gyrase subunit A; D 65.8 71 0.0024 28.1 20.2 116 176-297 67-196 (276)
356 3ott_A Two-component system se 61.2 1.5E+02 0.0051 30.4 28.6 179 140-338 112-303 (758)
357 3zwu_A Alkaline phosphatase PH 61.0 28 0.00096 34.7 8.6 60 222-281 478-549 (592)
358 3uc1_A DNA gyrase subunit A; D 58.3 1.1E+02 0.0037 27.8 19.3 116 176-297 94-228 (327)
359 4gq2_M Nucleoporin NUP120; bet 55.6 19 0.00066 38.4 6.9 38 178-216 237-274 (950)
360 4fhn_B Nucleoporin NUP120; pro 51.5 55 0.0019 35.7 9.8 38 178-216 239-276 (1139)
361 4a9v_A PHOX; hydrolase, beta-p 51.4 73 0.0025 31.5 9.5 61 221-281 477-549 (592)
362 3f7f_A Nucleoporin NUP120; nuc 50.3 29 0.00099 35.3 6.7 38 177-217 222-259 (729)
363 3ott_A Two-component system se 44.3 2.7E+02 0.0094 28.4 29.9 210 140-374 73-296 (758)
364 4a9v_A PHOX; hydrolase, beta-p 40.4 1.1E+02 0.0039 30.1 9.0 61 177-238 476-549 (592)
365 3qhy_B Beta-lactamase inhibito 35.9 2.2E+02 0.0076 24.9 18.7 205 148-384 41-245 (282)
366 3zwu_A Alkaline phosphatase PH 32.9 95 0.0033 30.9 7.3 56 313-371 478-545 (592)
No 1
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-49 Score=388.11 Aligned_cols=353 Identities=53% Similarity=1.014 Sum_probs=312.9
Q ss_pred ccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEc-------------------
Q psy14130 88 RGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPI------------------- 148 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------------------- 148 (494)
+.++.+||+|+++...+.+.++.++++....++..++++++++.++++.++++|.+.+...
T Consensus 4 ~~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~ 83 (402)
T 2aq5_A 4 QVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAP 83 (402)
T ss_dssp ----CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSC
T ss_pred cccCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCC
Confidence 4568999999999999999999999999999999999999999988876655555555543
Q ss_pred --------------------CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC
Q psy14130 149 --------------------HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK 208 (494)
Q Consensus 149 --------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~ 208 (494)
+.|+|||+.++........++..+.+|...|.+++|+|++.++|++|+.|+.|++||+.+
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC
Confidence 229999999886655555677889999999999999999867999999999999999999
Q ss_pred CeEEEEe--cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCCCceEEEEECCCCeEEEEEecCC
Q psy14130 209 GEALTVI--DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRH 285 (494)
Q Consensus 209 ~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 285 (494)
++.+..+ .+|.+.|++++|+|++++|++++.|+.|++||+++++.+..+ ..|.+..+..+.|+++ +.++++|++++
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~ 242 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRM 242 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEEEECTT
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEEeccCC
Confidence 9999999 889999999999999999999999999999999999999888 7888766889999998 78888887777
Q ss_pred CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe
Q psy14130 286 SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM 365 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 365 (494)
.|+.|++||+++...+......++...+.+++|+|+++.|+++|+.||.|++||+.++++....+..+.+..++.+++|+
T Consensus 243 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 89999999999877666666667778899999999999997888899999999999998755566666677899999999
Q ss_pred cCCceeeeccceeEEEEeeCCCCeEEEeEEEeeCCCCCCCCCCCCCCCCCCcccCHhhhcCCCCCCCeEeccCCCCcc
Q psy14130 366 PKRGCDVTQCEIFRFFKLHTTRNMCEPISMIVPRKSDQFQDDLYPDTAAPVPALSAADWYKGVNRPPVLMSMRTGVNV 443 (494)
Q Consensus 366 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~~~~~~sl~~~~~~ 443 (494)
|++.+++++++.+++|++.. +.++|+.+.+||+++.||.++||++....|+++++||+.|.+.+|.++||+|++.+
T Consensus 323 p~~~~~~s~~~~~~~~~l~~--~~~~~i~~~~pr~~~~f~~d~~p~~~~~~~~~sa~~w~~g~~~~~~~~s~~~~~~~ 398 (402)
T 2aq5_A 323 PKRGLEVNKCEIARFYKLHE--RKCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVP 398 (402)
T ss_dssp CGGGSCGGGTEEEEEEEEET--TEEEEEEEECCCCCSSCCTTTCCCEECSSCSBCHHHHHTTCCCCCCEECCSTTCCC
T ss_pred cccccceecceeEEEEEcCC--CcEEEEEEEcccchhhcccccCCCCCCCCcccCHHHHhCCCCCCceEEecCCcccC
Confidence 99999999999999999998 47999999999999999999999999999999999999999999999999998863
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-39 Score=317.93 Aligned_cols=217 Identities=21% Similarity=0.310 Sum_probs=190.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.+. +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++.++..+.+|...|.++.|+
T Consensus 172 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 172 MTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp SCCCEEETTSS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEEC
Confidence 47999999887 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCC-------------------CeEEEEEecCCCCce
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDT-------------------GRIVTTGFSRHSDRQ 289 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~l~~~g~~~~~d~~ 289 (494)
|++.+|++|+.|++|++||++++++...+..|... +.++.|+|+. +.++++| +.|+.
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg---s~D~~ 319 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSG---SRDKT 319 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEE---ETTSE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce-EEEEEEcCcccccchhhhccccccccCCCCCEEEEE---eCCCe
Confidence 99999999999999999999999999999999887 9999999863 4567777 69999
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
|++||+++......+ ..|...|.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+...|.+++|+|++.
T Consensus 320 i~iwd~~~~~~~~~~--~~h~~~v~~v~~~~~g~~l-~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EEEEETTTTEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCCEEEE---CCSSCEEEEEECSSSS
T ss_pred EEEEECCCCceEEEE--ECCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceEEEEc---CCCCcEEEEEEcCCCC
Confidence 999999876543322 3466789999999999999 899999999999999988755442 2357899999999999
Q ss_pred eeeec--cceeEEEEe
Q psy14130 370 CDVTQ--CEIFRFFKL 383 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l 383 (494)
+++++ |+.+++|++
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 88875 999999985
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=304.46 Aligned_cols=216 Identities=15% Similarity=0.233 Sum_probs=190.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...+.+++|+|++ .+|++|+.|+.|++||+.+++....+..|...|.+++|+
T Consensus 102 ~~i~lWd~~~~-------~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 102 AHIRLWDLENG-------KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 173 (321)
T ss_dssp SEEEEEETTTT-------EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC
T ss_pred CcEEEEECCCC-------CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC
Confidence 37999999988 6777888899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|+|++|++|+.|+.|++||+++++.+..+.+|... +..++|+|+ +.++++| +.|+.|++||+++...... ...
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd-~~~l~s~---s~dg~i~iwd~~~~~~~~~--~~~ 246 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP-IRSLTFSPD-SQLLVTA---SDDGYIKIYDVQHANLAGT--LSG 246 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-CCEEEECTT-SCEEEEE---CTTSCEEEEETTTCCEEEE--ECC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc-eeEEEEcCC-CCEEEEE---cCCCeEEEEECCCcceeEE--EcC
Confidence 99999999999999999999999999999999887 999999998 5666777 6999999999987543222 234
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
|...|.+++|+|++++| ++|+.|+.|++||+.+++++..+. .+...|.+++|+|++..++++ |+.+++|++
T Consensus 247 h~~~v~~~~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~---~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCVHTFF---DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCEEEEEEc---CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 66789999999999998 899999999999999988755543 246789999999999888774 899999985
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.7e-39 Score=305.95 Aligned_cols=220 Identities=16% Similarity=0.212 Sum_probs=185.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.+.... ......+.+|...|.++.|++++ .+++++.|++|++||+.+++.+..+.+|.+.|.+++|+
T Consensus 119 ~~v~iw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 119 NICSIYNLKTREGN---VRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp CEEEEEETTTCSBS---CEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECccCCCc---ceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 36999999875321 13456788999999999999985 58999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++|+.|+.|++||+++++++..+.+|... +..++|+|++ .++++| +.|+.|++||+++...........
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~-~~l~s~---s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNG-NAFATG---SDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC-EEEEEEcCCC-CEEEEE---cCCCcEEEEECCCCcEEEEEccCC
Confidence 99999999999999999999999999999999887 9999999985 455555 599999999998754332222112
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
....+.+++|+|++++| ++|+.||.|++||+.+++....+ .. +..+|.+++|+|++..++++ |+.+++|+
T Consensus 269 ~~~~v~~~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~~~~-~~--h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLL-LAGYDDFNCNVWDALKADRAGVL-AG--HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEE-EC--CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEE-EEECCCCeEEEEEcccCcEeeEe-ec--CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 23479999999999999 89999999999999988765443 22 46789999999999988875 89999995
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-38 Score=305.49 Aligned_cols=290 Identities=17% Similarity=0.168 Sum_probs=224.9
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++++|+| ++++|+|||.||+|+ +|+....+... .+
T Consensus 61 ~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~-vWd~~~~~~~~--~~---------------------------------- 102 (354)
T 2pbi_B 61 KGHGNKVLCMDWCK-DKRRIVSSSQDGKVI-VWDSFTTNKEH--AV---------------------------------- 102 (354)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEETTSEEE-EEETTTCCEEE--EE----------------------------------
T ss_pred cCCCCeEEEEEECC-CCCEEEEEeCCCeEE-EEECCCCCcce--EE----------------------------------
Confidence 59999999999999 899999999999999 88642211000 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
. ........+.++|....++..+ .+ +.+++|++......
T Consensus 103 ------------------------------~--~~~~~v~~~~~sp~g~~lasg~-~d--------~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 103 ------------------------------T--MPCTWVMACAYAPSGCAIACGG-LD--------NKCSVYPLTFDKNE 141 (354)
T ss_dssp ------------------------------E--CSSSCCCEEEECTTSSEEEEES-TT--------SEEEEEECCCCTTC
T ss_pred ------------------------------e--cCCCCEEEEEECCCCCEEEEee-CC--------CCEEEEEEeccccc
Confidence 0 0001223344444332333222 22 36999998765322
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC--CCCEEEEEeCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR--DGSRLVTTCKD 240 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d 240 (494)
.. ......+.+|...|.+++|+|++ ..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.|
T Consensus 142 ~~-~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 142 NM-AAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp CS-GGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cc-cccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 21 24456778899999999999998 7999999999999999999999999999999999999988 57899999999
Q ss_pred CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 241 KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 241 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
++|++||+++++++..+..|... +..++|+|++ .++++| +.|++|++||++................+.+++|+|
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~-~~l~s~---s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSG-DAFASG---SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCC-CEEEEE---eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 99999999999999999999887 9999999985 455555 589999999998754322222222335788999999
Q ss_pred CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 321 DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 321 ~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++++| ++|+.|+.|++||+.+++.+..+ . .+..+|.+++|+|++.+++++ |+.+++|+
T Consensus 295 ~g~~l-~~g~~d~~i~vwd~~~~~~~~~l-~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 SGRLL-FAGYNDYTINVWDVLKGSRVSIL-F--GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSEE-EEEETTSCEEEEETTTCSEEEEE-C--CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCEE-EEEECCCcEEEEECCCCceEEEE-E--CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99998 89999999999999998865443 2 346789999999999988885 89999994
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=304.69 Aligned_cols=224 Identities=14% Similarity=0.141 Sum_probs=184.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.+++... .....+.+|...|++++|+|++ ++|++|+.|++|++||+++++++..+.+|.+.|++++|+
T Consensus 103 g~v~lWd~~~~~~~~---~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 GAVELWELDENETLI---VSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp SEEEEEEECTTSSCE---EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCcee---EeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 479999999884321 1223456899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 RDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+++. +|++++.|++|++||+++++....+..+. ...+..++|+|+++.++++| +.|+.|++||+++.+....+.
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg---~~dg~v~~wd~~~~~~~~~~~- 254 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG---DENGTVSLVDTKSTSCVLSSA- 254 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE---ETTSEEEEEESCC--CCEEEE-
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe---ccCCcEEEEECCCCcEEEEEc-
Confidence 9874 78999999999999999999887764332 22378899999888899888 799999999999876544433
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce-eee--ccceeEEEEe
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC-DVT--QCEIFRFFKL 383 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~--~~~~~~~~~l 383 (494)
.|...|.+++|+|++..++++|+.|++|++||+.+++.+ .. ..|...|++++|+|++.. +++ .|+.+++|++
T Consensus 255 -~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~---~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 255 -VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RS---QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp -CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EE---CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred -CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EE---cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 467889999999998655599999999999999988753 22 235678999999999864 444 3999999999
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 330 ~~ 331 (344)
T 4gqb_B 330 PT 331 (344)
T ss_dssp CC
T ss_pred CC
Confidence 77
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-38 Score=306.80 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=180.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.++|+|||+.+++... .......+|...|++++|+|++ ++|++|+.|++|++||+++++.+..+.+|...|++++|
T Consensus 114 dg~v~lWd~~~~~~~~---~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 114 SGAVELWEILEKESLL---VNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp TSCEEEC--------C---CCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEeeccccceeE---EEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 3579999998874321 1223456899999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCC-EEEEEeCCCeEEEEeCCCCceEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
++++. ++++++.|++|++||+++++.+..+.. |... +.+++|+|+++.++++| +.|+.|++||+++......+
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-v~~v~~sp~~~~~la~g---~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI-PTSVTWHPEKDDTFACG---DETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC-EEEEEECTTSTTEEEEE---ESSSCEEEEESSCGGGCEEE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc-ccchhhhhcccceEEEe---ecccceeEEECCCCcEeEEE
Confidence 99875 789999999999999999987665543 3344 78999999988899888 79999999999886544333
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-CCceeeec--cceeEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP-KRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~~--~~~~~~~ 381 (494)
..+...|.+++|+|++..++++|+.|++|++||+++++.+ ..+ .+...|++++|+| ++.+++++ |+.+++|
T Consensus 266 --~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~-~~~---~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 266 --AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF-RDL---SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp --CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE-EEC---CCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred --eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe-EEC---CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 2366789999999998665599999999999999998764 322 3568899999999 67777764 9999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 340 ~~~~ 343 (357)
T 4g56_B 340 HLPS 343 (357)
T ss_dssp ECC-
T ss_pred ECCC
Confidence 9976
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.4e-38 Score=294.93 Aligned_cols=220 Identities=18% Similarity=0.266 Sum_probs=180.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++++ .....+.+|...|.+++|
T Consensus 77 ~~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 77 FRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred CEEEEEECCCC-------cEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE
Confidence 37999999988 6778899999999999999998 79999999999999999887 566778999999999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC-CCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 228 NR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD-TGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 228 ~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+| ++.+|++|+.|++|++||++++.....+..+....+..+.|.+. ++.++++| +.|++|++||+++......+
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~---s~D~~i~iWd~~~~~~~~~~- 224 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA---SDDLTIKIWDYQTKSCVATL- 224 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE---ETTSEEEEEETTTTEEEEEE-
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE---cCCCeEEEEeCCCCccceee-
Confidence 99 67899999999999999999888666665444333788888773 34566666 69999999999875443222
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeeec-cceeEEEE
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVTQ-CEIFRFFK 382 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~~-~~~~~~~~ 382 (494)
..|...|.+++|+|+++.| ++|+.||.|++||+.+++....+. . +...+.+++|+|++. +++++ ++.+.+|.
T Consensus 225 -~~h~~~v~~~~~~p~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~ 299 (304)
T 2ynn_A 225 -EGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSSTYKVEKTLN-V--GLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (304)
T ss_dssp -ECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEEC-C--SSSSEEEEEECTTCGGGCEEEEETTEEEEEE
T ss_pred -CCCCCCEEEEEECCCCCEE-EEEcCCCeEEEEECCCCceeeecc-C--CCccEEEEEECCCCCceEEEEecCCceEEEE
Confidence 3467889999999999988 999999999999999988754442 2 346799999999875 35555 77788888
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 300 ~~~ 302 (304)
T 2ynn_A 300 LGN 302 (304)
T ss_dssp CC-
T ss_pred ecc
Confidence 764
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-38 Score=309.14 Aligned_cols=298 Identities=19% Similarity=0.245 Sum_probs=227.0
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.++|++++|+| ++++|+|||.|++|+ +|+....+... .+
T Consensus 63 ~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~-iWd~~~~~~~~------------------------------------~~ 104 (380)
T 3iz6_a 63 QGHSGKVYSLDWTP-EKNWIVSASQDGRLI-VWNALTSQKTH------------------------------------AI 104 (380)
T ss_dssp CCCSSCEEEEEECT-TSSCEEEEETTSEEE-EEETTTTEEEE------------------------------------EE
T ss_pred cccccEEEEEEEcC-CCCEEEEEeCCCeEE-EEECCCCccce------------------------------------EE
Confidence 69999999999999 899999999999999 88743221000 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.. ....+..++++|+...++..+ .+ +.|+||++.+....
T Consensus 105 ~~--------------------------------h~~~v~~~~~s~~g~~las~~-~d--------~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 105 KL--------------------------------HCPWVMECAFAPNGQSVACGG-LD--------SACSIFNLSSQADR 143 (380)
T ss_dssp EC--------------------------------CCTTCCCCEECTTSSEEEECC-SS--------SCCEEEECCCCSSC
T ss_pred ec--------------------------------CCCCEEEEEECCCCCEEEEee-CC--------CcEEEEECCCCccc
Confidence 00 001122233444332222222 22 36999999765322
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-----cCCCCceEEEEEcC-CCCEEEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-----DCHPDVINCLSFNR-DGSRLVT 236 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-----~~h~~~v~~l~~~~-~~~~l~s 236 (494)
.........+.+|.+.|.++.|+|+++..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++.+|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 22223456788999999999999987678999999999999999999988877 67999999999987 8899999
Q ss_pred EeCCCeEEEEeCC-CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-----CC
Q psy14130 237 TCKDKTVRVLDPR-TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-----SS 310 (494)
Q Consensus 237 ~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~ 310 (494)
|+.|++|++||++ .++.+..+.+|.+. +..++|+|+ +.++++| +.|++|++||+++........... +.
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~-v~~v~~~p~-~~~l~s~---s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGD-INSVKFFPD-GQRFGTG---SDDGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSC-CCEEEECTT-SSEEEEE---CSSSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCC-eEEEEEecC-CCeEEEE---cCCCeEEEEECCCCcEEEEeccccccccccc
Confidence 9999999999998 45678889999988 999999998 5566666 699999999998754432222111 11
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+.+++|+|++++| ++|+.||.|++||+..++....+... ..+...|.+++|+|++..++++ |+.+++|++..
T Consensus 299 ~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 299 PIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSCSEEEECSSSSEE-EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CceEEEEECCCCCEE-EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 347899999999999 88999999999999988765444221 2356789999999999999886 89999999876
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.5e-37 Score=318.45 Aligned_cols=331 Identities=14% Similarity=0.169 Sum_probs=226.8
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecC---ceE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGG---GAF 79 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~ 79 (494)
+||...|++++|+| +|++||||+.|++|| +|+....+......+...... -.-++.+++...++....+. +.+
T Consensus 56 ~~h~~~v~~~~~sp-dg~~lasg~~d~~v~-lWd~~~~~~~~~~~~~~~~~~--v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 56 TEHSHQTTVAKTSP-SGYYCASGDVHGNVR-IWDTTQTTHILKTTIPVFSGP--VKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSEEE-EEESSSTTCCEEEEEECSSSC--EEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred cCCCCceEEEEECC-CCcEEEEEeCCCCEE-EeECCCCcceeeEeecccCCc--eEEEEECCCCCEEEEEECCCCceeEE
Confidence 59999999999999 899999999999999 888643222111111111110 11122233322222111110 111
Q ss_pred EEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceE-EEEEeecCCcEEEEEEcCcEEEEEcCC
Q psy14130 80 LVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFV-AVVTEVAGGGAFLVLPIHRVKLWYIPD 158 (494)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~v~iw~~~~ 158 (494)
.++.. .. ... .+..+...+..+.++|... .++. ++ .+++|++||..+
T Consensus 132 ~~wd~-------------------~~--~~~--~l~gh~~~v~~v~f~p~~~~~l~s-~s--------~D~~v~lwd~~~ 179 (611)
T 1nr0_A 132 FLFDT-------------------GT--SNG--NLTGQARAMNSVDFKPSRPFRIIS-GS--------DDNTVAIFEGPP 179 (611)
T ss_dssp EETTT-------------------CC--BCB--CCCCCSSCEEEEEECSSSSCEEEE-EE--------TTSCEEEEETTT
T ss_pred EEeeC-------------------CC--Ccc--eecCCCCCceEEEECCCCCeEEEE-Ee--------CCCeEEEEECCC
Confidence 11110 00 000 0111222333444444321 1111 12 234799999877
Q ss_pred CCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-------CCCCceEEEEEcCCC
Q psy14130 159 GGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-------CHPDVINCLSFNRDG 231 (494)
Q Consensus 159 ~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~ 231 (494)
. +....+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++.+..+. +|.+.|.+++|+|+|
T Consensus 180 ~-------~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 180 F-------KFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp B-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred C-------eEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 6 6677899999999999999998 799999999999999999999888884 799999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceEEEe-------------------------------------------eecCCCCceEE
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGLVISQG-------------------------------------------VCHPGTRSSKA 268 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~~~~~~-------------------------------------------~~~~~~~~~~~ 268 (494)
++|++++.|++|++||+++++++.++ .+|... +..+
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~-v~~l 330 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA-ITAL 330 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC-EEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC-EEEE
Confidence 99999999999999999987755433 457666 8999
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE--------------------------------------------
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL-------------------------------------------- 304 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~-------------------------------------------- 304 (494)
+|+|++..+++ | +.|++|++||+.+.......
T Consensus 331 ~~spdg~~l~s-~---s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 331 SSSADGKTLFS-A---DAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EECTTSSEEEE-E---ETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEeCCCCEEEE-E---eCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 99998555554 4 48999999998753211000
Q ss_pred ------------------------------------eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 305 ------------------------------------ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 305 ------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
....+...+.+++|+||+++| ++|+.|+.|++||+.+++....
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~l-asgs~D~~v~lwd~~~~~~~~~ 485 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFV-AVGGQDSKVHVYKLSGASVSEV 485 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEE-EEEETTSEEEEEEEETTEEEEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEE-EEeCCCCeEEEEEccCCceeee
Confidence 000112346789999999998 9999999999999988653211
Q ss_pred ecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 349 FLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 349 ~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
....+...|.+++|+|++.+++++ |+.+++|++..
T Consensus 486 --~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 486 --KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp --EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred --eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 113456789999999999999885 89999999876
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-36 Score=288.47 Aligned_cols=218 Identities=16% Similarity=0.251 Sum_probs=182.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||++ ++++..+.+|...|.+++|+
T Consensus 87 ~~v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~ 157 (319)
T 3frx_A 87 KTLRLWDVATG-------ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVV 157 (319)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEc
Confidence 47999999988 7778899999999999999998 799999999999999996 56778889999999999999
Q ss_pred CC------CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 229 RD------GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 229 ~~------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
|. +..|++++.|+.|++||+++++....+.+|... +..++|+|++ .++++| +.|+.|++||+++...
T Consensus 158 ~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~sp~g-~~l~s~---~~dg~i~iwd~~~~~~-- 230 (319)
T 3frx_A 158 PNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN-INTLTASPDG-TLIASA---GKDGEIMLWNLAAKKA-- 230 (319)
T ss_dssp CC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC-EEEEEECTTS-SEEEEE---ETTCEEEEEETTTTEE--
T ss_pred cCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc-EEEEEEcCCC-CEEEEE---eCCCeEEEEECCCCcE--
Confidence 85 458999999999999999999999999999988 9999999985 455555 5899999999987543
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-----cCCCCeeEEEEecCCceeeec--c
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-----LSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
...+.....+.+++|+|++.+| ++++ ++.+++|++..+.....+...+ .+...+.+++|+|++.+++++ |
T Consensus 231 -~~~~~~~~~v~~~~~sp~~~~l-a~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 231 -MYTLSAQDEVFSLAFSPNRYWL-AAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp -EEEEECCSCEEEEEECSSSSEE-EEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred -EEEecCCCcEEEEEEcCCCCEE-EEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 2333456789999999999988 6665 4569999998766543332221 234578999999999998875 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 308 g~i~vWd~~t 317 (319)
T 3frx_A 308 NVIRVWQVMT 317 (319)
T ss_dssp SCEEEEEEEE
T ss_pred ceEEEEEEee
Confidence 9999999876
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-36 Score=286.09 Aligned_cols=220 Identities=20% Similarity=0.361 Sum_probs=178.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 87 ~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 87 KTLKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEc
Confidence 47999999988 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+..+....+..+.|+|++..+++++ .|+.|++||+++...........
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~ 234 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT----LDNTLKLWDYSKGKCLKTYTGHK 234 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE----TTTEEEEEETTTTEEEEEECSSC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc----CCCeEEEEECCCCcEEEEEEecC
Confidence 99999999999999999999999988777655544488899999865555544 89999999998754432222211
Q ss_pred CCCceEEeEEe-CCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec----cceeEEEEe
Q psy14130 309 SSSGVLFPYYD-HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ----CEIFRFFKL 383 (494)
Q Consensus 309 ~~~~v~~~~~~-~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~----~~~~~~~~l 383 (494)
.........++ +++.+| ++|+.||.|++||+.+++.+..+. . +...|.+++|+|++..++++ |+.+++|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~-~--h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 235 NEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQTKEIVQKLQ-G--HTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CSSSCCCEEEECSSSCEE-EECCTTSCEEEEETTTCCEEEEEC-C--CSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CceEEEEEEEEeCCCcEE-EEECCCCEEEEEECCCchhhhhhh-c--cCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 11222333444 556666 999999999999999988654443 2 35789999999999988764 899999986
Q ss_pred e
Q psy14130 384 H 384 (494)
Q Consensus 384 ~ 384 (494)
+
T Consensus 311 d 311 (312)
T 4ery_A 311 D 311 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=290.43 Aligned_cols=225 Identities=18% Similarity=0.281 Sum_probs=179.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l 225 (494)
+.|+||++..+.. +.+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.++ ..+..+.+|...|.++
T Consensus 83 ~~v~iw~~~~~~~-----~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 83 ATTCIWKKNQDDF-----ECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp SCEEEEEECCC-E-----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred CcEEEEEccCCCe-----EEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 4799999887632 4567889999999999999998 79999999999999999876 3566788999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL- 302 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~- 302 (494)
+|+|++++|++++.|++|++||.++++ +...+.+|... +..++|+|++ .+|++| +.|++|++||........
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~-v~~l~~sp~g-~~l~s~---s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST-VWSLAFDPSG-QRLASC---SDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEEEECTTCTTC
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc-eEEEEECCCC-CEEEEE---eCCCeEEEeccccCCCCcc
Confidence 999999999999999999999998876 45778889887 9999999985 455555 599999999964322110
Q ss_pred -----------eEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC----ceEEecc--cccCCCCeeEEE
Q psy14130 303 -----------ALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER----PYIHFLN--QSLSGAPQRGLG 363 (494)
Q Consensus 303 -----------~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~----~~~~~~~--~~~~~~~v~~~~ 363 (494)
..... .+...|.+++|+|++..| ++++.|+.|++|+...+. +...... ...+...|.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGAL-ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCE-EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEecCCCEE-EEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 01111 256789999999999998 899999999999998653 1111111 123567899999
Q ss_pred EecCCc-eeeec--cceeEEEEeeC
Q psy14130 364 FMPKRG-CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~-~~~~~--~~~~~~~~l~~ 385 (494)
|+|++. +++++ |+.+++|++..
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCceEEEEcCCCCcEEEEEecC
Confidence 999874 66664 99999999987
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-36 Score=284.04 Aligned_cols=228 Identities=15% Similarity=0.224 Sum_probs=168.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~ 224 (494)
+.|+||++............+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.. .+++..+.+|...|.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 4799999864321101114567789999999999999998 7999999999999999943 2567788999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCC--ceEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTG--LVISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
++|+|++.+|++++.|++|++||.+++ +++..+.+|... +..+.|+|++ +.++++| +.|++|++||++.....
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~---s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT-VWSSDFDKTEGVFRLCSG---SDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCSSSSCEEEEE---ETTSCEEEEEEEEECTT
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc-EEEEEecCCCCeeEEEEE---eCCCeEEEEEecCCCcc
Confidence 999999999999999999999999876 578888999987 9999999974 3456666 59999999998653211
Q ss_pred -----eeEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--eEEecccccCCC-CeeEEEEec--CCc
Q psy14130 302 -----LALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--YIHFLNQSLSGA-PQRGLGFMP--KRG 369 (494)
Q Consensus 302 -----~~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~~~~~-~v~~~~~~p--~~~ 369 (494)
.....+ .|...|.+++|++++ .| ++++.||.|++||..+++. ...... .+.. .|.+++|+| ++.
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~--~h~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LI-ASVGADGVLAVYEEVDGEWKVFAKRAL--CHGVYEINVVKWLELNGKT 310 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CE-EEEETTSCEEEEEEETTEEEEEEEESC--TTTTSCEEEEEEC-----C
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EE-EEEeCCCEEEEEEcCCCceEEEecccc--ccccceEEEEEEecCCCce
Confidence 111112 266789999999765 55 8899999999999988742 222222 2344 799999999 677
Q ss_pred eeeec--cceeEEEEeeC
Q psy14130 370 CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l~~ 385 (494)
+++++ |+.+++|++..
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 77764 99999999865
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.9e-35 Score=280.01 Aligned_cols=218 Identities=16% Similarity=0.237 Sum_probs=175.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---CCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---CHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~h~~~v~~l 225 (494)
++|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+... ...... +|...|.++
T Consensus 98 ~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 98 KTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp SEEEEEETTSS-------CEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEE
T ss_pred CcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeee
Confidence 47999999988 6677889999999999999998 79999999999999999744 333333 789999999
Q ss_pred EEcCCC----------CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 226 SFNRDG----------SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 226 ~~~~~~----------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
+|+|++ .+|++++.|+.|++||. .++....+.+|... +..++|+|++ .++++| +.|+.|++||+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~-v~~~~~s~~g-~~l~sg---s~dg~v~iwd~ 242 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN-VNHLSISPNG-KYIATG---GKDKKLLIWDI 242 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC-EEEEEECTTS-SEEEEE---ETTCEEEEEES
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc-ceEEEECCCC-CEEEEE---cCCCeEEEEEC
Confidence 999987 79999999999999994 56677888899887 9999999995 555555 59999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE--Eeccc--------ccCCCCeeEEEEe
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI--HFLNQ--------SLSGAPQRGLGFM 365 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~--~~~~~--------~~~~~~v~~~~~~ 365 (494)
++...+... ..+...+.+++|+|++.++ ++ +.|+.|++||+.+++... .+... ..+...+.+++|+
T Consensus 243 ~~~~~~~~~--~~~~~~v~~v~~sp~~~~l-a~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 243 LNLTYPQRE--FDAGSTINQIAFNPKLQWV-AV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp SCCSSCSEE--EECSSCEEEEEECSSSCEE-EE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred CCCccccee--ecCCCcEEEEEECCCCCEE-EE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 654443332 2345579999999999876 54 468889999998876432 21100 1245679999999
Q ss_pred cCCceeeec--cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++..++++ |+.+++|++.+
T Consensus 319 p~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCeEEEecCCceEEEEEEEc
Confidence 999988875 99999999876
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-34 Score=281.79 Aligned_cols=219 Identities=20% Similarity=0.365 Sum_probs=181.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+++++....+. +...+.+++|+
T Consensus 145 ~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 145 RLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 47999999987 6778899999999999999998 799999999999999999999888877 66789999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceEEEe-------eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 229 R-DGSRLVTTCKDKTVRVLDPRTGLVISQG-------VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 229 ~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
| ++++|++|+.|+.|++||+++++.+..+ .+|... +..++|+|++. ++++| +.|+.|++||+++...
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~g~-~l~s~---s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQ-SVVSG---SLDRSVKLWNLQNANN 290 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC-EEEEEECTTSS-EEEEE---ETTSEEEEEEC-----
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC-EEEEEECCCCC-EEEEE---eCCCEEEEEECCCCCC
Confidence 9 8999999999999999999999877776 467776 99999999854 55555 5899999999976432
Q ss_pred c----------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec----
Q psy14130 301 P----------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP---- 366 (494)
Q Consensus 301 ~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p---- 366 (494)
. .......|...|.+++|+|++++| ++|+.|+.|++||+.+++++..+ .. +...|.+++|+|
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~l-~~--h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPLLML-QG--HRNSVISVAVANGSSL 366 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEEEEE-EC--CSSCEEEEEECSSCTT
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEE-CC--CCCCEEEEEecCCcCc
Confidence 1 112233566789999999999998 89999999999999999875443 22 357899999986
Q ss_pred --CCceeeec--cceeEEEEeeC
Q psy14130 367 --KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 367 --~~~~~~~~--~~~~~~~~l~~ 385 (494)
++..++++ |+.+++|++..
T Consensus 367 ~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCCEEEEECCCCcEEECcccc
Confidence 56777774 99999999875
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-34 Score=298.16 Aligned_cols=332 Identities=13% Similarity=0.163 Sum_probs=218.7
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccc-cCcccccccccc--eeecCCceEEEEEEEecCceE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYD-NVPITRNAHDSH--FCAANPKFVAVVTEVAGGGAF 79 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~ 79 (494)
+||.+.|++++|+| ++++|+||+.|++|+ +|+....+..... ........+... -++.+++...++ ....++.+
T Consensus 187 ~~H~~~V~~v~fsp-dg~~las~s~D~~i~-lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D~~v 263 (611)
T 1nr0_A 187 GEHTKFVHSVRYNP-DGSLFASTGGDGTIV-LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASADKTI 263 (611)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETTSEE
T ss_pred ccccCceEEEEECC-CCCEEEEEECCCcEE-EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCCCeE
Confidence 58999999999999 899999999999999 8875433221100 000000011111 112222222111 12233344
Q ss_pred EEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCC
Q psy14130 80 LVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDG 159 (494)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~ 159 (494)
.++.+.... +...+........ ....+.+ .+...+.....+.+++|+...+
T Consensus 264 ~lWd~~~~~-------------------~~~~~~~~~~~~~--------~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~ 314 (611)
T 1nr0_A 264 KIWNVATLK-------------------VEKTIPVGTRIED--------QQLGIIW--TKQALVSISANGFINFVNPELG 314 (611)
T ss_dssp EEEETTTTE-------------------EEEEEECCSSGGG--------CEEEEEE--CSSCEEEEETTCCEEEEETTTT
T ss_pred EEEeCCCCc-------------------eeeeecCCCCccc--------eeEEEEE--cCCEEEEEeCCCcEEEEeCCCC
Confidence 443332100 0011111000000 0011111 1222223333457999998876
Q ss_pred CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cC---------------------
Q psy14130 160 GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-DC--------------------- 217 (494)
Q Consensus 160 ~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~--------------------- 217 (494)
.....+.+|...|.+++|+|++ .+|++++.|++|++||+.+++....+ .+
T Consensus 315 -------~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~ 386 (611)
T 1nr0_A 315 -------SIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 386 (611)
T ss_dssp -------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET
T ss_pred -------CcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEc
Confidence 5667888999999999999998 79999999999999999876543221 01
Q ss_pred ------------------------------------------------------------CCCceEEEEEcCCCCEEEEE
Q psy14130 218 ------------------------------------------------------------HPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 218 ------------------------------------------------------------h~~~v~~l~~~~~~~~l~s~ 237 (494)
|...+.+++|+|||++|++|
T Consensus 387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg 466 (611)
T 1nr0_A 387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG 466 (611)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred CCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe
Confidence 23457789999999999999
Q ss_pred eCCCeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-CCCceE
Q psy14130 238 CKDKTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-SSSGVL 314 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~ 314 (494)
+.|++|++||+.++.. +.. ..|... +..++|+|++ .+++++ +.|++|++||+.+........... |...|.
T Consensus 467 s~D~~v~lwd~~~~~~~~~~~-~~h~~~-v~~v~fspdg-~~las~---s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 467 GQDSKVHVYKLSGASVSEVKT-IVHPAE-ITSVAFSNNG-AFLVAT---DQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp ETTSEEEEEEEETTEEEEEEE-EECSSC-EEEEEECTTS-SEEEEE---ETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred CCCCeEEEEEccCCceeeeec-cCCCCc-eEEEEECCCC-CEEEEE---cCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 9999999999987753 233 678877 9999999995 455555 599999999987622222111122 678899
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE-EecccccCCCCeeEEEEecCCceeee--ccceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYI-HFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l 383 (494)
+++|+||+++| ++|+.|++|++||+.++.... ..+..+ ....|.+++|+|++. +++ .|+.+++|++
T Consensus 541 ~v~fspdg~~l-asgs~D~~v~lW~~~~~~~~~~~~~~~h-~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 541 CVSWSPDNVRL-ATGSLDNSVIVWNMNKPSDHPIIIKGAH-AMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEECTTSSEE-EEEETTSCEEEEETTCTTSCCEEETTSS-TTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEEECCCCCEE-EEEECCCcEEEEECCCcccccchhhccC-cccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 99999999999 999999999999998875322 333322 156899999999998 555 3999999987
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=278.63 Aligned_cols=182 Identities=15% Similarity=0.172 Sum_probs=157.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--CHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l~ 226 (494)
+.|+|||+.++ +.+..+.+|...|.+++|+|++..+|++|+.|++|++||+++++....+. .|...+.+++
T Consensus 149 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 149 ICIKVWDLAQQ-------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 47999999988 78889999999999999999987799999999999999999998888764 4667899999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+| ++.+|++|+.|++|++||+++++++.++.+|... +.+++|+|++..++++| +.|++|+|||+++.+. ..
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~fsp~g~~~lasg---s~D~~i~vwd~~~~~~---~~ 294 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC-VTGLVFSPHSVPFLASL---SEDCSLAVLDSSLSEL---FR 294 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC-EEEEEECSSSSCCEEEE---ETTSCEEEECTTCCEE---EE
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCeEEEEE---eCCCeEEEEECCCCcE---EE
Confidence 999 4678999999999999999999999999999988 99999999977788877 6999999999987532 33
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
...|...|.+++|+|+++.++++|+.|++|++|++.++.
T Consensus 295 ~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 295 SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 346778999999999998877899999999999998754
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.6e-34 Score=267.42 Aligned_cols=211 Identities=18% Similarity=0.203 Sum_probs=168.9
Q ss_pred EecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeE
Q psy14130 170 MDLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTV 243 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v 243 (494)
.++.+|...|.+++|+|. + ++|+||+.|++|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|++|
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 456679999999999864 5 799999999999999998874 56678889999999999997 8999999999999
Q ss_pred EEEeCCCCc--eEEEeeecCCCCceEEEEECCC------------CeEEEEEecCCCCceEEEEeCCCCCCcee-Eee-e
Q psy14130 244 RVLDPRTGL--VISQGVCHPGTRSSKAVFIGDT------------GRIVTTGFSRHSDRQVGLWDENDLNTPLA-LET-V 307 (494)
Q Consensus 244 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~-~~~-~ 307 (494)
++||++++. ....+.+|... +..+.|+|+. +.++++| +.|++|++||+++...... ... .
T Consensus 126 ~~wd~~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~l~sg---s~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 126 SVVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp EEEEBCSSSCBCCEEEECCSSC-EEEEEECCCC------------CCEEEEE---ETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEecCCCceeeeeeecccCc-cceEeecCCcccccccCCCCCCcceEEEE---cCCCcEEEEEEcCCCceEEEEEEec
Confidence 999998764 24567788877 8999999863 3567777 6999999999987543221 222 2
Q ss_pred cCCCceEEeEEeCCC--CEEEEEEeCCCcEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 308 DSSSGVLFPYYDHDT--RILFLAGKGDGNIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~--~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
.|...|.+++|+|++ ..++++|+.|++|++||++++.. ....+....+...|.+++|+|++..++++ |+.+++|
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 466889999999996 34449999999999999987532 12233223446789999999999988874 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
+...
T Consensus 282 ~~~~ 285 (297)
T 2pm7_B 282 KENL 285 (297)
T ss_dssp EECT
T ss_pred EECC
Confidence 9876
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-34 Score=270.74 Aligned_cols=244 Identities=20% Similarity=0.268 Sum_probs=195.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||..+|++++|+| ++.+|+||+.|++|+ +|+....+... .+
T Consensus 77 ~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~-lWd~~~~~~~~--~~---------------------------------- 118 (321)
T 3ow8_A 77 EGHQLGVVSVDISH-TLPIAASSSLDAHIR-LWDLENGKQIK--SI---------------------------------- 118 (321)
T ss_dssp CCCSSCEEEEEECS-SSSEEEEEETTSEEE-EEETTTTEEEE--EE----------------------------------
T ss_pred ccCCCCEEEEEECC-CCCEEEEEeCCCcEE-EEECCCCCEEE--EE----------------------------------
Confidence 69999999999999 899999999999999 88753221100 00
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
. ........+.++|+...++.. +.+ +.|++|++.++
T Consensus 119 ~--------------------------------~~~~~~~~~~~spdg~~l~~g-~~d--------g~v~i~~~~~~--- 154 (321)
T 3ow8_A 119 D--------------------------------AGPVDAWTLAFSPDSQYLATG-THV--------GKVNIFGVESG--- 154 (321)
T ss_dssp E--------------------------------CCTTCCCCEEECTTSSEEEEE-CTT--------SEEEEEETTTC---
T ss_pred e--------------------------------CCCccEEEEEECCCCCEEEEE-cCC--------CcEEEEEcCCC---
Confidence 0 000111223333332222222 222 36999999988
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+..|...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 155 ----~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~ 229 (321)
T 3ow8_A 155 ----KKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 229 (321)
T ss_dssp ----SEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC
T ss_pred ----ceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe
Confidence 5667788899999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||+++++.+..+.+|... +..++|+|++..++ +| +.|++|++||+++......+ ..+...|.+++|+|++
T Consensus 230 i~iwd~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~-s~---s~D~~v~iwd~~~~~~~~~~--~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 230 IKIYDVQHANLAGTLSGHASW-VLNVAFCPDDTHFV-SS---SSDKSVKVWDVGTRTCVHTF--FDHQDQVWGVKYNGNG 302 (321)
T ss_dssp EEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEE-EE---ETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTS
T ss_pred EEEEECCCcceeEEEcCCCCc-eEEEEECCCCCEEE-EE---eCCCcEEEEeCCCCEEEEEE--cCCCCcEEEEEECCCC
Confidence 999999999999999999988 99999999955554 55 48999999999875443222 3567889999999999
Q ss_pred CEEEEEEeCCCcEEEEEee
Q psy14130 323 RILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~ 341 (494)
+.| ++++.||.|++||+.
T Consensus 303 ~~l-~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 SKI-VSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEE-EEEETTCCEEEEECC
T ss_pred CEE-EEEeCCCeEEEEeCC
Confidence 998 899999999999963
No 21
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.4e-34 Score=274.63 Aligned_cols=220 Identities=14% Similarity=0.252 Sum_probs=181.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~ 224 (494)
+.|++||+.++ +.+..+.+|...|.+++|+| ++ .+|++|+.|+.|++||+.+++.+..+ .+|...|.+
T Consensus 95 g~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 95 GIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp CEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred CEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 36999999987 66778889999999999999 66 79999999999999999999999888 689999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee----------------------------cCCCCceEEEEECCCCe
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC----------------------------HPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~ 276 (494)
++|+|++++|++++.|+.|++||+++++.+..+.. |... +.++.|+ +.
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~---~~ 242 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY-VDCVRWL---GD 242 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-CCEEEEE---TT
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce-EEEEEEc---CC
Confidence 99999999999999999999999998765443332 7776 8999998 33
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCc------------eeEeeecCCCceEEeEEeCC--CCEEEEEEeCCCcEEEEEeeC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTP------------LALETVDSSSGVLFPYYDHD--TRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~------------~~~~~~~~~~~v~~~~~~~~--~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+++++ +.|+.|++||+++.... .......+...+.+++|+|+ +++| ++|+.||.|++||+.+
T Consensus 243 ~l~~~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l-~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 243 LILSK---SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML-ALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EEEEE---CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE-EEECTTSCEEEEECCS
T ss_pred EEEEE---ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE-EEEecCCcEEEEECCC
Confidence 66666 68999999998875431 11222245567899999999 8988 8999999999999999
Q ss_pred CCceE---EecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 343 ERPYI---HFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 343 ~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+++.. ..+..+.+..+|.+++|+|++.+++++ |+.+++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 86532 233344446889999999999988875 8899999975
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.4e-34 Score=297.45 Aligned_cols=219 Identities=19% Similarity=0.264 Sum_probs=178.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l 225 (494)
+.|+|||+.++ .....+.+|...|.+++|+|++ .+|+||+.|++|++||+......... .+|...|.++
T Consensus 452 g~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 GELRLWDLAAG-------VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CcEEEEECCCC-------cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 47999999988 6778889999999999999998 79999999999999998765443332 4688999999
Q ss_pred EEcCCC--CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDG--SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~--~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|++ ..|++++.|++|++||++++++...+.+|.+. +.+++|+|++ .++++| +.|+.|++||+++...
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~-v~~v~~spdg-~~l~sg---~~Dg~i~iwd~~~~~~--- 595 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDG-SLCASG---GKDGVVLLWDLAEGKK--- 595 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTSBCEEEETTTTEE---
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC-EEEEEEeCCC-CEEEEE---eCCCeEEEEECCCCce---
Confidence 999986 68999999999999999999999999999988 9999999985 555555 5899999999987543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc----------------CCCCeeEEEEecC
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL----------------SGAPQRGLGFMPK 367 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~----------------~~~~v~~~~~~p~ 367 (494)
+..+.+...+.+++|+|++.+| +++ .|+.|++||+++++.+..+..... ....+.+++|+|+
T Consensus 596 ~~~~~~~~~v~~~~~sp~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd 673 (694)
T 3dm0_A 596 LYSLEANSVIHALCFSPNRYWL-CAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD 673 (694)
T ss_dssp EECCBCSSCEEEEEECSSSSEE-EEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT
T ss_pred EEEecCCCcEEEEEEcCCCcEE-EEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC
Confidence 3334456789999999999877 554 567799999999876544322111 1123789999999
Q ss_pred Cceeeec--cceeEEEEeeC
Q psy14130 368 RGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 368 ~~~~~~~--~~~~~~~~l~~ 385 (494)
+..++++ |+.+++|++..
T Consensus 674 g~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 674 GSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp SSEEEEEETTSEEEEEEC--
T ss_pred CCEEEEEcCCCeEEEEeccC
Confidence 9999885 99999999753
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.8e-33 Score=264.81 Aligned_cols=293 Identities=16% Similarity=0.194 Sum_probs=218.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||+++|++|+|+|+++++|+|||.|++|+ +|+.............
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~-vWd~~~~~~~~~~~~~--------------------------------- 80 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTII-MWKLTRDETNYGIPQR--------------------------------- 80 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEE-EEEECCSSSCSEEEEE---------------------------------
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEE-EEECCCCCcccceeeE---------------------------------
Confidence 699999999999995589999999999999 8886533211000000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+......+..+.++|+...++.. +. ++.|++|+....
T Consensus 81 ------------------------------~l~~h~~~V~~~~~s~dg~~l~s~-~~--------d~~i~~~~~~~~--- 118 (340)
T 4aow_A 81 ------------------------------ALRGHSHFVSDVVISSDGQFALSG-SW--------DGTLRLWDLTTG--- 118 (340)
T ss_dssp ------------------------------EECCCSSCEEEEEECTTSSEEEEE-ET--------TSEEEEEETTTT---
T ss_pred ------------------------------EEeCCCCCEEEEEECCCCCEEEEE-cc--------cccceEEeeccc---
Confidence 000000112222232221111111 12 236999999887
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEEcCCC--CEEEEEeC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSFNRDG--SRLVTTCK 239 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~~~~~--~~l~s~~~ 239 (494)
........+...+..+.+++.+ .+|++|+.|+.+++||+...... ..+.+|...+..++|++++ .++++++.
T Consensus 119 ----~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 119 ----TTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ----EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred ----ceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 5566677788899999999998 79999999999999999776543 4456899999999999864 57899999
Q ss_pred CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEe
Q psy14130 240 DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYD 319 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 319 (494)
|+.|++||+++++.+..+.+|.+. +.+++|+|++ .++++| +.|+.|++||+++... ...+.+...+.++.|+
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~-~~l~s~---s~Dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDG-SLCASG---GKDGQAMLWDLNEGKH---LYTLDGGDIINALCFS 265 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTS-SEEEEE---ETTCEEEEEETTTTEE---EEEEECSSCEEEEEEC
T ss_pred CCEEEEEECCCCceeeEecCCCCc-EEEEEECCCC-CEEEEE---eCCCeEEEEEeccCce---eeeecCCceEEeeecC
Confidence 999999999999999999999987 9999999985 555555 5899999999987543 3344566789999999
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeCCCceEEecc------cccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTNERPYIHFLN------QSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~------~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
|++.++ +++.|+.|++||++++.....+.. ...+...|.+++|+|++.+++++ |+.+++|++.++
T Consensus 266 ~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 266 PNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 987655 566899999999988765433322 12346789999999999988875 899999999873
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.7e-33 Score=263.49 Aligned_cols=216 Identities=16% Similarity=0.161 Sum_probs=183.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 119 ~~i~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 119 STLSIWDLAAPTP-----RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp SEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CcEEEEECCCCCc-----ceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 4799999988732 3556778899999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+. +... +..+.|+|++. ++++| +.++.|++||+++... .....
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~-v~~~~~s~~~~-~l~~~---~~~~~i~~~~~~~~~~---~~~~~ 263 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ-IFSLGYCPTGE-WLAVG---MESSNVEVLHVNKPDK---YQLHL 263 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTSSCE---EEECC
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCc-eEEEEECCCCC-EEEEE---cCCCcEEEEECCCCCe---EEEcC
Confidence 999999999999999999999999877765 4444 89999999855 55555 4899999999987542 23345
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+...+.+++|+|++++| ++++.||.|++||+.+++.... ..+..++.+++|+|++..++++ |+.+++|++.
T Consensus 264 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWF-VSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEE----EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CccceeEEEECCCCCEE-EEecCCCcEEEEECCCCeEEEE----ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 67889999999999998 8899999999999999886522 2346789999999999888764 8899999974
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3e-33 Score=287.31 Aligned_cols=317 Identities=18% Similarity=0.282 Sum_probs=222.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||..+|++++|+| ++++|++++.|++|+ +|+...... ..+..... .-.-++.+++...++. ...++.+.++
T Consensus 259 ~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~-~w~~~~~~~---~~~~~h~~--~v~~~~~~~~~~~l~t-~~~d~~i~~w 330 (577)
T 2ymu_A 259 TGHSSSVNGVAFRP-DGQTIASASDDKTVK-LWNRNGQLL---QTLTGHSS--SVWGVAFSPDGQTIAS-ASDDKTVKLW 330 (577)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTSCEE---EEECCCSS--CEEEEEECTTSSEEEE-EETTSCEEEE
T ss_pred ecCCCCEEEEEEcC-CCCEEEEEeCCCEEE-EEeCCCcEE---EEEecCCC--CeEEEEECCCCCEEEE-EeCCCeEEEE
Confidence 58999999999999 899999999999999 787432211 11110000 0001122222222211 2223333333
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
..... ... .+.........++++|+...++.. ...+.|++|+.. +
T Consensus 331 ~~~~~--------------------~~~--~~~~~~~~v~~~~~s~~g~~l~~~---------~~dg~v~~~~~~-~--- 375 (577)
T 2ymu_A 331 NRNGQ--------------------HLQ--TLTGHSSSVWGVAFSPDGQTIASA---------SDDKTVKLWNRN-G--- 375 (577)
T ss_dssp ETTSC--------------------EEE--EECCCSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETT-C---
T ss_pred eCCCC--------------------eeE--EEeCCCCCEEEEEECCCCCEEEEE---------eCCCEEEEEcCC-C---
Confidence 22110 000 011111122223333322111111 123469999953 3
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.
T Consensus 376 ----~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 376 ----QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp ----CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ----CEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 5567788999999999999998 79999999999999996 57788889999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
|++||. +++.+..+.+|... +..++|+|++ .+++++ +.|+.|++||... .... ....|...|.+++|+|++
T Consensus 450 v~~w~~-~~~~~~~~~~~~~~-v~~~~~spd~-~~las~---~~d~~i~iw~~~~-~~~~--~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 450 VKLWNR-NGQLLQTLTGHSSS-VRGVAFSPDG-QTIASA---SDDKTVKLWNRNG-QLLQ--TLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp EEEEET-TSCEEEEEECCSSC-EEEEEECTTS-CEEEEE---ETTSEEEEEETTS-CEEE--EEECCSSCEEEEEECTTS
T ss_pred EEEEEC-CCCEEEEEcCCCCC-EEEEEEcCCC-CEEEEE---eCCCEEEEEcCCC-CEEE--EEeCCCCCEEEEEEcCCC
Confidence 999996 57788889999887 9999999985 555555 5899999999643 3222 223467889999999999
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
++| ++++.||.|++||. +++.+..+. .|..+|++++|+||+.+++++ |+.+++|+
T Consensus 521 ~~l-~s~~~dg~v~lwd~-~~~~~~~~~---~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 QTI-ASASDDKTVKLWNR-NGQLLQTLT---GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCE-EEEETTSEEEEECT-TSCEEEEEE---CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEE-EEEECcCEEEEEeC-CCCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999 89999999999996 555544332 246789999999999988875 89999996
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.9e-33 Score=270.22 Aligned_cols=289 Identities=11% Similarity=0.098 Sum_probs=208.1
Q ss_pred CccccceeeEEECCCCC-eeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEE
Q psy14130 3 KLYRGPVLDIKWNPFND-NIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLV 81 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~-~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v 81 (494)
.||...|++++|+| ++ ++|++|+.||+|+ +|+....+.....
T Consensus 70 ~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~----------------------------------- 112 (383)
T 3ei3_B 70 SPFDRRVTSLEWHP-THPTTVAVGSKGGDII-LWDYDVQNKTSFI----------------------------------- 112 (383)
T ss_dssp CCCSSCEEEEEECS-SCTTEEEEEEBTSCEE-EEETTSTTCEEEE-----------------------------------
T ss_pred cCCCCCEEEEEECC-CCCCEEEEEcCCCeEE-EEeCCCcccceee-----------------------------------
Confidence 58999999999999 66 9999999999999 8875432211000
Q ss_pred EeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCC-ceEEEEEeecCCcEEEEEEcCcEEEEEcCCCC
Q psy14130 82 LPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANP-KFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGG 160 (494)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~ 160 (494)
........+..+.++| ....++. ++.+ +.|++||+.+..
T Consensus 113 -------------------------------~~~~h~~~v~~~~~~~~~~~~l~s-~~~d--------~~i~iwd~~~~~ 152 (383)
T 3ei3_B 113 -------------------------------QGMGPGDAITGMKFNQFNTNQLFV-SSIR--------GATTLRDFSGSV 152 (383)
T ss_dssp -------------------------------CCCSTTCBEEEEEEETTEEEEEEE-EETT--------TEEEEEETTSCE
T ss_pred -------------------------------ecCCcCCceeEEEeCCCCCCEEEE-EeCC--------CEEEEEECCCCc
Confidence 0000111222333444 1111222 1222 369999998531
Q ss_pred CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC-EEEEEeC
Q psy14130 161 LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS-RLVTTCK 239 (494)
Q Consensus 161 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~ 239 (494)
. .......+|...|.+++|+|++ .+|++|+.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|++++.
T Consensus 153 ~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 I-----QVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp E-----EEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred e-----EEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 1 2222234456889999999998 79999999999999999 5778889999999999999999999 9999999
Q ss_pred CCeEEEEeCCC----CceEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-----C
Q psy14130 240 DKTVRVLDPRT----GLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-----S 309 (494)
Q Consensus 240 d~~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~ 309 (494)
|+.|++||+++ +.++..+ .|... +..+.|+| + +.+++++ +.|+.|++||+++......+.... +
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~~-~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PHEKP-VNAAYFNPTD-STKLLTT---DQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-ECSSC-EEEEEECTTT-SCEEEEE---ESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred CCEEEEEeCCCCCcccceEEEe-cCCCc-eEEEEEcCCC-CCEEEEE---cCCCcEEEEECCCCcccccccccccccccc
Confidence 99999999998 5566666 67776 99999999 7 4555555 489999999999866554443211 1
Q ss_pred C----------CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-ccee
Q psy14130 310 S----------SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIF 378 (494)
Q Consensus 310 ~----------~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~ 378 (494)
. ..+..++|+|++++ +|+.||.|++||+.+++.+..+ ..+.+...+..++|+|++.+++++ |+.+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l-~~~~~~~~~~~~~~s~~g~~l~s~sd~~i 375 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQL-RDPNAAGIISLNKFSPTGDVLASGMGFNI 375 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEE-CBTTBCSCCCEEEECTTSSEEEEEETTEE
T ss_pred ccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeee-cCCCCCceEEEEEEecCccEEEEecCCcE
Confidence 1 23334555555554 6678999999999999875444 333345678888999999988775 8899
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
++|++.+
T Consensus 376 ~iw~~~~ 382 (383)
T 3ei3_B 376 LIWNRED 382 (383)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9999865
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-33 Score=275.32 Aligned_cols=177 Identities=20% Similarity=0.385 Sum_probs=157.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ .++..+.+|...|.++.|+|++ .+|++|+.|++|++||+.++++...+.+|...|.+++|+
T Consensus 214 ~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~ 285 (410)
T 1vyh_C 214 KTIKMWEVQTG-------YCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 285 (410)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEc
Confidence 47999999988 6778899999999999999998 799999999999999999999999999999999999999
Q ss_pred CC--------------------CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 229 RD--------------------GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 229 ~~--------------------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
|+ |.+|++|+.|++|++||+++++++..+.+|... +..+.|+|++..+++++ .|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s----~D~ 360 (410)
T 1vyh_C 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA----DDK 360 (410)
T ss_dssp CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE----TTT
T ss_pred CcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc-EEEEEEcCCCCEEEEEe----CCC
Confidence 96 679999999999999999999999999999987 89999999866555555 899
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.|++||+++......+. .|...|.+++|+|++.+| ++|+.||.|++|+++
T Consensus 361 ~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC--
T ss_pred eEEEEECCCCceEEEEc--CCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEeCC
Confidence 99999998766544432 466789999999999998 999999999999864
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-32 Score=259.67 Aligned_cols=220 Identities=15% Similarity=0.207 Sum_probs=190.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ ..+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.+++.+..+.+|.+.|++++|+
T Consensus 35 g~v~lWd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 35 GRVELWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (304)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CcEEEEECCCC-------ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 47999999988 6778889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|++++|++|+.|++|++||++++. ....+.+|... +.+++|+|.++.++++| +.|++|++||+++........ .
T Consensus 107 ~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~~l~sg---s~D~~v~iwd~~~~~~~~~~~-~ 181 (304)
T 2ynn_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLT-T 181 (304)
T ss_dssp SSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC-EEEEEECTTCTTEEEEE---ETTSEEEEEETTCSSCSEEEE-C
T ss_pred CCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc-EEEEEECCCCCCEEEEE---eCCCeEEEEECCCCCccceec-c
Confidence 999999999999999999999874 56778889887 99999999767777777 699999999998765544332 2
Q ss_pred cCCCceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDH--DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+...+..+.|+| ++++| ++|+.|+.|++||+++++.+..+. . +...|.+++|+|++..++++ |+.+++|++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~~~~~~~~~-~--h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSCVATLE-G--HMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp CCTTCEEEEEECCSTTCCEE-EEEETTSEEEEEETTTTEEEEEEE-C--CSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCcCcEEEEEEEEcCCCCEE-EEEcCCCeEEEEeCCCCccceeeC-C--CCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3456788888887 66677 999999999999999988754443 2 35789999999999888875 899999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 258 ~~ 259 (304)
T 2ynn_A 258 ST 259 (304)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-33 Score=270.97 Aligned_cols=229 Identities=13% Similarity=0.095 Sum_probs=170.6
Q ss_pred cEEEEEcCCCCCCCCcccc--eEecccccccEEEEEEcCCCCCEEE--EEeCCCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEW--IMDLHGHKRRVGYIEWHPTAENVVA--SAGFDYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~p~~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
.+++|++.+.......... ......+...+.+++|+|+| ++|+ +++.|++|+|||+.+++++..+. |...|.++
T Consensus 105 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v 182 (365)
T 4h5i_A 105 HLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDL 182 (365)
T ss_dssp CEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEE
T ss_pred cEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEE
Confidence 6899998765321110000 01123455679999999999 5655 44579999999999999998887 77889999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEE--eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ--GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|||++|++++.+ .+++|+..+++.+.. ...|... +..++|+|++..+++++..+.....+++||+........
T Consensus 183 ~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 183 HFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 999999999999855 566777777775543 3445555 889999999666666552111222788999875432211
Q ss_pred --EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeE
Q psy14130 304 --LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFR 379 (494)
Q Consensus 304 --~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~ 379 (494)
.....+...|.+++|+|||++| ++|+.|++|+|||+++++++..++..| ..+|++++|+||+.+++++ |+++|
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~l-asgs~D~~V~iwd~~~~~~~~~~~~gH--~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELA-VLASNDNSIALVKLKDLSMSKIFKQAH--SFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEE-EEEETTSCEEEEETTTTEEEEEETTSS--SSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCce-EEEcCCCEEEEEECCCCcEEEEecCcc--cCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 1223566789999999999999 999999999999999998866665543 6789999999999999885 99999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
||++..
T Consensus 338 vw~ip~ 343 (365)
T 4h5i_A 338 IIKLPL 343 (365)
T ss_dssp EEECCT
T ss_pred EEEcCC
Confidence 999965
No 30
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.8e-33 Score=265.47 Aligned_cols=224 Identities=13% Similarity=0.180 Sum_probs=176.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEE------cCCCCCEEEEEeCCCeEEEEECCCCe-EEEEecCCCC-
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW------HPTAENVVASAGFDYLIILWDVGKGE-ALTVIDCHPD- 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~------~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~- 220 (494)
+.|++||+.++. ..+..+.+|...|.+++| +|++ .+|++++.|+.|++||+.+++ .+..+..|.+
T Consensus 90 g~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 90 GNLHIWNLEAPE------MPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp SCEEEECTTSCS------SCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred CeEEEEeCCCCC------ccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 479999999873 266788899999999955 6787 799999999999999999886 6777776655
Q ss_pred ---ceEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC---CCCeEEEEEecCCCCceE
Q psy14130 221 ---VINCLS----FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG---DTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 221 ---~v~~l~----~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~g~~~~~d~~i 290 (494)
.|.+++ |+|++++|++++.|+.|++||+++++.... ..|... +..+.|+| ++. ++++| +.|+.|
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~-~l~~~---~~dg~i 236 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNG-VCSLEFDRKDISMN-KLVAT---SLEGKF 236 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSC-EEEEEESCSSSSCC-EEEEE---ESTTEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCc-eEEEEcCCCCCCCC-EEEEE---CCCCeE
Confidence 899998 788999999999999999999999886544 556666 89999999 644 45555 489999
Q ss_pred EEEeCCCCCCceeEe---eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceE----------------Eecc
Q psy14130 291 GLWDENDLNTPLALE---TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYI----------------HFLN 351 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~----------------~~~~ 351 (494)
++||+++........ ...+...+.+++|+|+++.++++|+.||.|++||++++.... ....
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 999998654433322 125678899999999999555999999999999999764321 1111
Q ss_pred cccCCCCeeEEEEecCCceee-ec--cceeEEEEeeC
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDV-TQ--CEIFRFFKLHT 385 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~-~~--~~~~~~~~l~~ 385 (494)
...+..+|.+++|+|++..++ ++ |+.+++|++..
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 223467899999999998876 43 89999999976
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.8e-33 Score=269.80 Aligned_cols=227 Identities=11% Similarity=0.123 Sum_probs=179.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccc-----cccEEEEEEc----CCCCCE-EEEEeCCCeEEEEECCC------CeEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGH-----KRRVGYIEWH----PTAENV-VASAGFDYLIILWDVGK------GEAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~----p~~~~~-l~s~s~d~~v~iwd~~~------~~~~ 212 (494)
+.|++|++.++.... ......+.+| ...|.+++|+ |++ .+ |++++.|+.|++||+.+ ++.+
T Consensus 91 g~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 91 GDLLFYRITREDETK--KVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp SCEEEEEEEECTTTC--CEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred CCEEEEEccCCcccc--cccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 479999998873210 0116677788 5999999999 998 68 99999999999999988 6555
Q ss_pred E-----Ee-------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee---c---CCCCceEEEEECCC
Q psy14130 213 T-----VI-------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC---H---PGTRSSKAVFIGDT 274 (494)
Q Consensus 213 ~-----~~-------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---~---~~~~~~~~~~~~~~ 274 (494)
. .+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. | ... +..++|+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~-i~~i~~~~~~ 245 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVKFSPQG 245 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEEECSST
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc-cceEEECCCC
Confidence 5 66 4589999999999999 999999999999999999999999988 8 776 9999999985
Q ss_pred CeEEEEEecCCCC---ceEEEEeCCCCCCceeEeee-----------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 275 GRIVTTGFSRHSD---RQVGLWDENDLNTPLALETV-----------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 275 ~~l~~~g~~~~~d---~~i~iwd~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
. ++++| +.| +.|++||+++......+... .+...+.+++|+|++++| ++|+.||.|++||+
T Consensus 246 ~-~l~~~---~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 246 S-LLAIA---HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLRFWDV 320 (397)
T ss_dssp T-EEEEE---EEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEEEEET
T ss_pred C-EEEEE---ecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE-EEEeCCCeEEEEEc
Confidence 5 55555 478 99999999876543322210 056789999999999998 88999999999999
Q ss_pred eCCCceEEeccc---ccC---------------CCCeeEEEEecCC----------ceeeec--cceeEEEEeeC
Q psy14130 341 TNERPYIHFLNQ---SLS---------------GAPQRGLGFMPKR----------GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 341 ~~~~~~~~~~~~---~~~---------------~~~v~~~~~~p~~----------~~~~~~--~~~~~~~~l~~ 385 (494)
.+++.+..+... ..+ ..+|.+++|+|++ .+++++ |+.+++|++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 998875554310 022 6789999999998 566654 99999999976
No 32
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-32 Score=262.34 Aligned_cols=177 Identities=21% Similarity=0.312 Sum_probs=153.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++||+++++++..+.+|...|++++|
T Consensus 163 d~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 234 (340)
T 1got_B 163 DTTCALWDIETG-------QQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234 (340)
T ss_dssp TSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred CCcEEEEECCCC-------cEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE
Confidence 347999999988 7778899999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|++++|++|+.|++|++||+++++.+..+..+.. ..+..+.|+|+ +.++++| +.|+.|++||+.+......+
T Consensus 235 ~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g---~~d~~i~vwd~~~~~~~~~~-- 308 (340)
T 1got_B 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS-GRLLLAG---YDDFNCNVWDALKADRAGVL-- 308 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEE---ETTSEEEEEETTTCCEEEEE--
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC-CCEEEEE---CCCCeEEEEEcccCcEeeEe--
Confidence 99999999999999999999999987777653321 23789999998 5566666 59999999999875543322
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
..|...|.+++|+|++.+| ++|+.||.|++||
T Consensus 309 ~~h~~~v~~~~~s~dg~~l-~s~s~D~~i~iWd 340 (340)
T 1got_B 309 AGHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN 340 (340)
T ss_dssp ECCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred ecCCCcEEEEEEcCCCCEE-EEEcCCccEEecC
Confidence 3577899999999999999 9999999999996
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2e-33 Score=266.05 Aligned_cols=207 Identities=15% Similarity=0.181 Sum_probs=163.8
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|...|.+++|+|. + ++|++|+.|++|++||++++ +.+..+.+|...|.+++|+|+ +.+|++|+.|++|+
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 45679999999999763 5 79999999999999999887 466778899999999999997 78999999999999
Q ss_pred EEeCCCCce---EEEeeecCCCCceEEEEECCC----------------CeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 245 VLDPRTGLV---ISQGVCHPGTRSSKAVFIGDT----------------GRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 245 iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------------~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+||++.+.. ...+.+|... +..+.|+|+. +.++++| +.|+.|++||++.........
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg---s~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIG-CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG---GCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSC-BCCCEECCCCCC------CCSCCCCCCCBEECC---BTTSBCCEEEECTTSCEEEEE
T ss_pred EEecCCCCCcceeeeeccccCC-cceEEEccccCCccccccccccCccccceEEEe---cCCCeEEEEEeCCCCccceee
Confidence 999987642 3445677766 8889998863 3567777 699999999997543222222
Q ss_pred e-ecCCCceEEeEEeCCC----CEEEEEEeCCCcEEEEEeeCCC---ceEEecccccCCCCeeEEEEecCCceeeec--c
Q psy14130 306 T-VDSSSGVLFPYYDHDT----RILFLAGKGDGNIRYYELTNER---PYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 306 ~-~~~~~~v~~~~~~~~~----~~l~~~g~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
. ..|...|.+++|+|++ +.| ++|+.|++|++||+.+.. .....+. .+...|.+++|+|++..++++ |
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~l-as~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTI-ASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEE-EEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESS
T ss_pred ecccCCCceEEEEecCCCCCCCceE-EEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCC
Confidence 2 2466789999999987 556 999999999999998731 1111222 236789999999999988774 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++..
T Consensus 284 ~~v~lw~~~~ 293 (316)
T 3bg1_A 284 NKVTLWKESV 293 (316)
T ss_dssp SCEEEEEECT
T ss_pred CeEEEEEECC
Confidence 9999999875
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9e-32 Score=276.36 Aligned_cols=319 Identities=18% Similarity=0.283 Sum_probs=223.2
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|...|.+++|+| ++++|++++.|++|+ +|+...+.. ..+..... .-.-++..++...++. ...++.+.++
T Consensus 218 ~~~~~~v~~~~~s~-dg~~l~~~~~d~~i~-~w~~~~~~~---~~~~~~~~--~v~~v~~~~d~~~l~~-~~~d~~i~~w 289 (577)
T 2ymu_A 218 TGHSSSVRGVAFSP-DGQTIASASDDKTVK-LWNRNGQLL---QTLTGHSS--SVNGVAFRPDGQTIAS-ASDDKTVKLW 289 (577)
T ss_dssp ECCSSCEEEEEECT-TSSCEEEEETTSCEE-EECTTSCEE---EEECCCSS--CEEEEEECTTSSEEEE-EETTSCEEEE
T ss_pred ecCCCCEEEEEECC-CCCEEEEEeCCCEEE-EEeCCCCEE---EEEecCCC--CEEEEEEcCCCCEEEE-EeCCCEEEEE
Confidence 47999999999999 899999999999999 886432211 11110000 0011112222221111 1222333332
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEE-EcCcEEEEEcCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL-PIHRVKLWYIPDGGL 161 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~v~iw~~~~~~~ 161 (494)
.... ..... +.........++++|+. ..++.. .++.|++||+...
T Consensus 290 ~~~~--------------------~~~~~--~~~h~~~v~~~~~~~~~----------~~l~t~~~d~~i~~w~~~~~-- 335 (577)
T 2ymu_A 290 NRNG--------------------QLLQT--LTGHSSSVWGVAFSPDG----------QTIASASDDKTVKLWNRNGQ-- 335 (577)
T ss_dssp ETTS--------------------CEEEE--ECCCSSCEEEEEECTTS----------SEEEEEETTSCEEEEETTSC--
T ss_pred eCCC--------------------cEEEE--EecCCCCeEEEEECCCC----------CEEEEEeCCCeEEEEeCCCC--
Confidence 2110 00000 01111122223333322 222222 2347999997643
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK 241 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~ 241 (494)
.+..+.+|...|.+++|+|++ .+|++++.|+.|++||. +++.+..+.+|...|.+++|+|+|++|++++.|+
T Consensus 336 ------~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 336 ------HLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp ------EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ------eeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCC
Confidence 456778899999999999998 79999999999999996 5778888999999999999999999999999999
Q ss_pred eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.|++||. +++.+..+.+|... +..++|+|++.. ++++ +.|+.|++||... .. ......+...+.+++|+|+
T Consensus 408 ~v~~~~~-~~~~~~~~~~~~~~-v~~~~~s~d~~~-l~~~---~~d~~v~~w~~~~-~~--~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 408 TVKLWNR-NGQLLQTLTGHSSS-VWGVAFSPDDQT-IASA---SDDKTVKLWNRNG-QL--LQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp EEEEECT-TCCEEEEEECCSSC-EEEEEECTTSSE-EEEE---ETTSEEEEEETTS-CE--EEEEECCSSCEEEEEECTT
T ss_pred EEEEEeC-CCCEEEEecCCCCC-eEEEEECCCCCE-EEEE---cCCCEEEEEECCC-CE--EEEEcCCCCCEEEEEEcCC
Confidence 9999995 57788899999887 999999999554 4555 4899999999653 22 2223356788999999999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+++| ++++.|+.|++||. +++.+..+. . +..+|++++|+|++.+++++ |+.+++|++..
T Consensus 479 ~~~l-as~~~d~~i~iw~~-~~~~~~~~~-~--h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 479 GQTI-ASASDDKTVKLWNR-NGQLLQTLT-G--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEE-EEEETTSEEEEEET-TSCEEEEEE-C--CSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCEE-EEEeCCCEEEEEcC-CCCEEEEEe-C--CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 9998 89999999999995 555544332 2 46789999999999988875 88999999643
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.3e-33 Score=273.34 Aligned_cols=327 Identities=13% Similarity=0.135 Sum_probs=219.9
Q ss_pred ccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEEecc
Q psy14130 6 RGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIH 85 (494)
Q Consensus 6 ~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~ 85 (494)
...+++++|+| ++++|++|+.|+.|+ +|+......... +. ...........++...++ ....++.+.++.+.
T Consensus 56 ~~~~~~~~~s~-~g~~l~~~~~d~~v~-i~d~~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~ 127 (420)
T 3vl1_A 56 VDAGKGNTFEK-VGSHLYKARLDGHDF-LFNTIIRDGSKM--LK---RADYTAVDTAKLQMRRFI-LGTTEGDIKVLDSN 127 (420)
T ss_dssp CBCCTTCEEEE-EETTEEEEEETTEEE-EEECCSEETTTT--SC---SCCEEEEEEECSSSCEEE-EEETTSCEEEECTT
T ss_pred cccccceeeee-cCCeEEEEEcCCcEE-EEEecccceeeE--Ee---cCCceEEEEEecCCCEEE-EEECCCCEEEEeCC
Confidence 44567999999 899999999999999 888654332111 10 000011111122221111 12233444443322
Q ss_pred ccccccCCCCceeecccCCccceeeceec-cCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCC
Q psy14130 86 RFRGVRSSKFRHVYGVHSKRDGCYDNVPI-TRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGN 164 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~ 164 (494)
.. ..+.. ......+..+.++|....++.. ..++.|++||+.++
T Consensus 128 ~~----------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~---------s~d~~i~iwd~~~~----- 171 (420)
T 3vl1_A 128 FN----------------------LQREIDQAHVSEITKLKFFPSGEALISS---------SQDMQLKIWSVKDG----- 171 (420)
T ss_dssp SC----------------------EEEEETTSSSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETTTC-----
T ss_pred Cc----------------------ceeeecccccCccEEEEECCCCCEEEEE---------eCCCeEEEEeCCCC-----
Confidence 10 00011 1122233334444332211111 12247999999988
Q ss_pred cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC---CCCceEE-----------------
Q psy14130 165 LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC---HPDVINC----------------- 224 (494)
Q Consensus 165 ~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~---h~~~v~~----------------- 224 (494)
+.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++.+..+.. |...|.+
T Consensus 172 --~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 172 --SNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp --CCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred --cCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 5667888999999999999998 7999999999999999999999988874 3444444
Q ss_pred ----EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 225 ----LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 225 ----l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
++|+|++++|++++.||.|++||+++++.+..+.. |... +..++|+|++..++++| +.|+.|++||+++..
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~g---~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS-CNSLTVDGNNANYIYAG---YENGMLAQWDLRSPE 324 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC-EEEEEECSSCTTEEEEE---ETTSEEEEEETTCTT
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC-ceeEEEeCCCCCEEEEE---eCCCeEEEEEcCCCc
Confidence 45578999999999999999999999997777754 5555 99999999976477777 699999999999876
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec------ccccCCCCeeEEEEecCCc----
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL------NQSLSGAPQRGLGFMPKRG---- 369 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~---- 369 (494)
.+.......+...+.++.+ +++++| ++++.||.|++||+.......... ....+...+.+++|+|++.
T Consensus 325 ~~~~~~~~~~~~~v~~~~~-~~~~~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~ 402 (420)
T 3vl1_A 325 CPVGEFLINEGTPINNVYF-AAGALF-VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGE 402 (420)
T ss_dssp SCSEEEEESTTSCEEEEEE-ETTEEE-EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCE
T ss_pred CchhhhhccCCCCceEEEe-CCCCEE-EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcce
Confidence 6444444335566777754 577766 899999999999998742210000 0122457899999999988
Q ss_pred eeeec-cceeEEEEeeC
Q psy14130 370 CDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~-~~~~~~~~l~~ 385 (494)
+++++ ++.+++|++..
T Consensus 403 l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 403 VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEEETTTEEEEEESCC
T ss_pred EEEEcCCceEEEEeccC
Confidence 55554 88999999764
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=270.11 Aligned_cols=218 Identities=16% Similarity=0.161 Sum_probs=179.7
Q ss_pred cCcEEEEEcCCCCCCCCcccceEeccccccc---------------EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR---------------VGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~---------------V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
.+.|++||+.++ +.+..+..|... +.+++|+|++ .+++++.|+.|++||+.+++.+
T Consensus 170 d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 170 ENVTILWNVISG-------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp TCCEEEEETTTT-------EEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCS
T ss_pred CCeEEEEECCCC-------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCcee
Confidence 357999999887 566666667666 9999999985 6899999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... +..+.|+|++ +++++ +.|+.|++
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~--~l~~~---~~d~~i~i 314 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-IVSASWVGDD--KVISC---SMDGSVRL 314 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-EEEEEEETTT--EEEEE---ETTSEEEE
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-EEEEEECCCC--EEEEE---eCCCcEEE
Confidence 999999999999999999999999999999999999999988899888887 9999999985 55555 48999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC--------------------ceEEeccc
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER--------------------PYIHFLNQ 352 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~--------------------~~~~~~~~ 352 (494)
||+++....... ..+...+.+++|+|++++| ++++.||.|++||+.+++ .+.. +..
T Consensus 315 ~d~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 390 (425)
T 1r5m_A 315 WSLKQNTLLALS--IVDGVPIFAGRISQDGQKY-AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS-YQS 390 (425)
T ss_dssp EETTTTEEEEEE--ECTTCCEEEEEECTTSSEE-EEEETTSCEEEEECHHHHC--------------CEECCEEEE-ECC
T ss_pred EECCCCcEeEec--ccCCccEEEEEEcCCCCEE-EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh-hcC
Confidence 999875432222 2456789999999999998 889999999999999876 3322 222
Q ss_pred ccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
+....+|.+++|+|++.+++++ |+.+++|++.
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 2111289999999999888664 8999999975
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=258.87 Aligned_cols=216 Identities=15% Similarity=0.192 Sum_probs=179.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCe-----------EE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGE-----------AL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~-----------~~ 212 (494)
+.|++||+.++ +.+..+. |...|.+++|+|++ .+|++++.+ +.|++||+..+. .+
T Consensus 96 g~i~iwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 96 YSIKLWDVSNG-------QCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred CeEEEEECCCC-------cEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 36999999988 5555666 88999999999998 799999998 999999997553 34
Q ss_pred EEecCCCC--ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 213 TVIDCHPD--VINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 213 ~~~~~h~~--~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
..+..|.+ .+.+++|+|++++|++++.|+.|++||+++ ++.+..+..|... +..+.|+|++..+ +++ +.|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l-~~~---~~d~~ 241 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS-ISDMQFSPDLTYF-ITS---SRDTN 241 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC-EEEEEECTTSSEE-EEE---ETTSE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc-eeEEEECCCCCEE-EEe---cCCce
Confidence 45556666 999999999999999999999999999999 6788888888887 9999999985555 455 48999
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--------------cEEEEEeeCCCceEEecccccC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--------------NIRYYELTNERPYIHFLNQSLS 355 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--------------~i~~wd~~~~~~~~~~~~~~~~ 355 (494)
|++||+++..... .+.+...+..++|+|+++++ ++++.++ .+++||+.+++.+..+.. +
T Consensus 242 i~v~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~ 314 (369)
T 3zwl_B 242 SFLVDVSTLQVLK---KYETDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG---H 314 (369)
T ss_dssp EEEEETTTCCEEE---EEECSSCEEEEEECSSSSEE-EEEECCC-------------CEEEEEETTTCCEEEEEEC---C
T ss_pred EEEEECCCCceee---eecCCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec---c
Confidence 9999998765432 23367789999999999999 6777777 899999999987554432 3
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
...|.+++|+|++.+++++ |+.+++|++..
T Consensus 315 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 315 FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 5789999999999988875 89999999976
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-33 Score=280.18 Aligned_cols=295 Identities=13% Similarity=0.124 Sum_probs=203.4
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|...|+||+|||.++++||||+.||+|+ +|+...........
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~-lWd~~~~~~~~~~~----------------------------------- 159 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIM-LWNFGIKDKPTFIK----------------------------------- 159 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEE-EECSSCCSCCEEEC-----------------------------------
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEE-EEECCCCCceeEEE-----------------------------------
Confidence 468899999999997788999999999999 88754332111000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
...+...+..+.|+|..-..+..++.+ ++|+|||+.++..
T Consensus 160 -------------------------------~~gH~~~V~~l~f~p~~~~~l~s~s~D--------~~v~iwd~~~~~~- 199 (435)
T 4e54_B 160 -------------------------------GIGAGGSITGLKFNPLNTNQFYASSME--------GTTRLQDFKGNIL- 199 (435)
T ss_dssp -------------------------------CCSSSCCCCEEEECSSCTTEEEEECSS--------SCEEEEETTSCEE-
T ss_pred -------------------------------ccCCCCCEEEEEEeCCCCCEEEEEeCC--------CEEEEeeccCCce-
Confidence 000112233334433110011112223 4799999976521
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCC-EEEEEeCCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGS-RLVTTCKDK 241 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~d~ 241 (494)
........+...+.+++|+|++ .+|++|+.||.|++||++ ++.+..+.+|...|++++|+|++. +|++++.|+
T Consensus 200 ----~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 200 ----RVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp ----EEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred ----eEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 1122223345568899999998 799999999999999996 456778889999999999999876 788999999
Q ss_pred eEEEEeCCCCceEEE---eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC----CCceE
Q psy14130 242 TVRVLDPRTGLVISQ---GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS----SSGVL 314 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~v~ 314 (494)
.|++||+++++.... ..+|... +.+++|+|++..+++++ .|+.|+|||+++...+........ ...+.
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~spdg~~l~s~~----~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHP-VNAACFSPDGARLLTTD----QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSC-EEECCBCTTSSEEEEEE----SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred eeeEEecccccccceEEEeeecccc-ccceeECCCCCeeEEEc----CCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999998764333 3567777 89999999865555544 899999999988765544322111 11233
Q ss_pred EeEEeCCCCEEEEE-----------EeCCCcEEEEEeeCCCceEEecccccCCCCeeEE-EEecCCceeeec-cceeEEE
Q psy14130 315 FPYYDHDTRILFLA-----------GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL-GFMPKRGCDVTQ-CEIFRFF 381 (494)
Q Consensus 315 ~~~~~~~~~~l~~~-----------g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~~~~-~~~~~~~ 381 (494)
...|+|++..++++ +..++.|++||..+++.+..+... +...|.++ +|+|++.+++++ |+.+++|
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~--~~~~v~s~~~fspdg~~lasg~d~~i~iW 426 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP--ESSGISSLNEFNPMGDTLASAMGYHILIW 426 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS--SCCCCCCEEEECTTSSCEEEECSSEEEEC
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC--CCCcEEEEEEECCCCCEEEEEcCCcEEEE
Confidence 45566666665332 234467999999999876554433 34567777 699999998886 8899999
Q ss_pred EeeCC
Q psy14130 382 KLHTT 386 (494)
Q Consensus 382 ~l~~~ 386 (494)
++..+
T Consensus 427 ~~~~g 431 (435)
T 4e54_B 427 SQQEA 431 (435)
T ss_dssp CCC--
T ss_pred ECCcC
Confidence 98873
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.5e-33 Score=267.57 Aligned_cols=182 Identities=14% Similarity=0.189 Sum_probs=157.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe--cCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI--DCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~h~~~v~~l~ 226 (494)
+.|++||+.++ +.+..+.+|...|++++|+|++..++++++.|++|++||+++++++..+ ..|...+++++
T Consensus 161 g~v~iwd~~~~-------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 161 FSVKVWDLSQK-------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 47999999988 7788899999999999999998778999999999999999998876654 35778899999
Q ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+|+ +.+|++|+.|+.|++||+++++.+..+.+|... +.+++|+|+++.+|++| +.|++|+|||+++.+. +.
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~~lasg---s~D~~i~iwd~~~~~~---~~ 306 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN-ITGLAYSYHSSPFLASI---SEDCTVAVLDADFSEV---FR 306 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC-EEEEEECSSSSCCEEEE---ETTSCEEEECTTSCEE---EE
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEEecccee-EEEEEEcCCCCCEEEEE---eCCCEEEEEECCCCcE---eE
Confidence 9997 568999999999999999999999999999887 99999999987888888 6999999999987532 34
Q ss_pred eecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 306 TVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
...|...|.+++|+| ++++| ++|+.||+|++||+.....
T Consensus 307 ~~~H~~~V~~vafsP~d~~~l-~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 307 DLSHRDFVTGVAWSPLDHSKF-TTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECCCSSCEEEEEECSSSTTEE-EEEETTSCEEEEECC----
T ss_pred ECCCCCCEEEEEEeCCCCCEE-EEEcCCCeEEEEECCCCCc
Confidence 456888999999999 67777 9999999999999976543
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.7e-32 Score=263.71 Aligned_cols=223 Identities=17% Similarity=0.282 Sum_probs=187.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ .+|++|+.|+.|++||++ .+..+..+.+|.+.|.+++|
T Consensus 156 g~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 225 (401)
T 4aez_A 156 GLVDIYDVESQ-------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAW 225 (401)
T ss_dssp SCEEEEETTTC-------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEECcCC-------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEE
Confidence 47999999988 66778889999999999953 599999999999999998 56678889999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|++++|++++.|+.|++||+++++.+..+..|... +..++|+|++..++++| +++.|+.|++||+++... ...+
T Consensus 226 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~p~~~~ll~~~-~gs~d~~i~i~d~~~~~~---~~~~ 300 (401)
T 4aez_A 226 RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA-VKAVAWCPWQSNLLATG-GGTMDKQIHFWNAATGAR---VNTV 300 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC-CCEEEECTTSTTEEEEE-CCTTTCEEEEEETTTCCE---EEEE
T ss_pred cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce-EEEEEECCCCCCEEEEe-cCCCCCEEEEEECCCCCE---EEEE
Confidence 999999999999999999999999999999888887 99999999988999987 002699999999987644 2333
Q ss_pred cCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 308 DSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
.+...+.+++|+|+++.++++ |+.||.|++||+.+++..... ....+...|.+++|+|++..++++ |+.+++|++.
T Consensus 301 ~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~-~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 301 DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV-DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE-EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE-EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 466789999999999999444 558999999999987643322 122346789999999999988774 8999999998
Q ss_pred CCC
Q psy14130 385 TTR 387 (494)
Q Consensus 385 ~~~ 387 (494)
.++
T Consensus 380 ~~~ 382 (401)
T 4aez_A 380 DGD 382 (401)
T ss_dssp C--
T ss_pred CCc
Confidence 743
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=270.60 Aligned_cols=230 Identities=12% Similarity=0.138 Sum_probs=181.4
Q ss_pred CcEEEEEcCCCCCCCC--cccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------CC
Q psy14130 149 HRVKLWYIPDGGLSGN--LNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH------PD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------~~ 220 (494)
+.|++||+.++..... .......+.+|...|.+++|+|++..+|++++.|+.|++||+++++.+..+..| ..
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQ 215 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCC
Confidence 4799999988741100 001223456799999999999995589999999999999999999999988876 78
Q ss_pred ceEEEEEcCCC-CEEEEEeCCC---eEEEEeCCCC-ceEEEee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 221 VINCLSFNRDG-SRLVTTCKDK---TVRVLDPRTG-LVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 221 ~v~~l~~~~~~-~~l~s~~~d~---~v~iwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.|.+++|+|++ .+|++++.|+ .|++||++++ ..+..+. +|... +..++|+|+++.++++| +.|+.|++||
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~---~~dg~v~~wd 291 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG-ILSLDWCHQDEHLLLSS---GRDNTVLLWN 291 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC-EEEEEECSSCSSCEEEE---ESSSEEEEEC
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc-eeEEEeCCCCCCeEEEE---eCCCCEEEee
Confidence 99999999997 6999999998 9999999987 5677777 78877 99999999445666666 5899999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCC-CEEEEEEeCCCcEEEEEeeCCCceEEec--------------cc-------
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDT-RILFLAGKGDGNIRYYELTNERPYIHFL--------------NQ------- 352 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~g~~dg~i~~wd~~~~~~~~~~~--------------~~------- 352 (494)
+++......+ ..+...+.+++|+|++ .+| ++++.||.|++||+.+.+...... ..
T Consensus 292 ~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (416)
T 2pm9_A 292 PESAEQLSQF--PARGNWCFKTKFAPEAPDLF-ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESK 368 (416)
T ss_dssp SSSCCEEEEE--ECSSSCCCCEEECTTCTTEE-EECCSSSEEEEEESCCCCCSSCC----------------------CC
T ss_pred CCCCccceee--cCCCCceEEEEECCCCCCEE-EEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccc
Confidence 9876543322 2466789999999999 555 999999999999998765321110 00
Q ss_pred -----------ccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 353 -----------SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 353 -----------~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.-+..++.+++|+|+|.+++++ |+.+++|++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 369 EKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp SCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 0035678899999999999886 89999999876
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.9e-32 Score=265.00 Aligned_cols=185 Identities=25% Similarity=0.353 Sum_probs=154.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEec-----ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC-CCeEEEEecCCCCce
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL-----HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG-KGEALTVIDCHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~-----~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h~~~v 222 (494)
++|++||+.++ +.+..+ .+|...|.+++|++...++|++|+.|++|++||++ .++.+..+.+|.+.|
T Consensus 180 ~~i~~wd~~~~-------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 180 QTCVLWDVTTG-------QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp SCEEEECTTTC-------CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCC
T ss_pred CcEEEEEcCCC-------cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCe
Confidence 37999999988 333333 67999999999988444899999999999999998 457788899999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC------CceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT------RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
++++|+|++++|++|+.|++|++||+++++.+..+..+... .+..++|+|+ +.++++| +.|+.|++||+.
T Consensus 253 ~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~g---~~dg~i~vwd~~ 328 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS-GRLLFAG---YSNGDCYVWDTL 328 (380)
T ss_dssp CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS-SSEEEEE---CTTSCEEEEETT
T ss_pred EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC-CCEEEEE---ECCCCEEEEECC
Confidence 99999999999999999999999999999988877654321 2688999998 5667777 699999999998
Q ss_pred CCCCceeEee--ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 297 DLNTPLALET--VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 297 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.......... ..|...|.+++|+|++++| ++|+.||.|++|++...+.
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCSSSS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCCCcc
Confidence 7554333221 2466789999999999998 9999999999999987653
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=269.38 Aligned_cols=227 Identities=16% Similarity=0.223 Sum_probs=185.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe------EEEE---ecCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE------ALTV---IDCHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~------~~~~---~~~h~ 219 (494)
+.|++|++.+.... ......+.+|...|.+++|+|++..+|++++.|+.|++||+.+++ .... +..|.
T Consensus 89 g~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 89 GSLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp SCEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred CeEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 47999999872111 046678889999999999999844799999999999999999876 3322 36799
Q ss_pred CceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecC-----CCCceEEEEECCCCeEEEEEecCCCCc---eE
Q psy14130 220 DVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDR---QV 290 (494)
Q Consensus 220 ~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~---~i 290 (494)
..|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+. ...+..++|+|++..+++++ +.|+ .|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~d~~~~~i 242 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA---TGSDNDPSI 242 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE---ECCSSSCCC
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE---ECCCCCceE
Confidence 99999999998 7899999999999999999999988888773 33499999999976777777 5777 99
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC-
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR- 368 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 368 (494)
++||+++...+.......+...+.+++|+| ++++| ++++.||.|++||+++++++..+. .+..+|.+++|+|++
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~---~~~~~v~~~~~s~~~~ 318 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL-LSSGRDNTVLLWNPESAEQLSQFP---ARGNWCFKTKFAPEAP 318 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE-EEEESSSEEEEECSSSCCEEEEEE---CSSSCCCCEEECTTCT
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE-EEEeCCCCEEEeeCCCCccceeec---CCCCceEEEEECCCCC
Confidence 999999764443332214678899999999 78877 899999999999999988754443 235789999999998
Q ss_pred ceeeec--cceeEEEEeeC
Q psy14130 369 GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~--~~~~~~~~l~~ 385 (494)
.+++++ |+.+++|++..
T Consensus 319 ~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 319 DLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp TEEEECCSSSEEEEEESCC
T ss_pred CEEEEEecCCcEEEEEccC
Confidence 677764 89999999987
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-31 Score=256.11 Aligned_cols=218 Identities=17% Similarity=0.208 Sum_probs=175.9
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|...|.+++|+++ + .+|++|+.|+.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp EECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 45569999999999877 6 799999999999999999987 77788889999999999999 99999999999999
Q ss_pred EEeCCCCc--eEEEeeecCCCCceEEEEECC------------CCeEEEEEecCCCCceEEEEeCCCCCCceeE--eeec
Q psy14130 245 VLDPRTGL--VISQGVCHPGTRSSKAVFIGD------------TGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--ETVD 308 (494)
Q Consensus 245 iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~ 308 (494)
+||++++. ....+..|... +..+.|+|. ++.++++| +.|+.|++||+++....... ....
T Consensus 129 v~d~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 129 VVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp EEECCTTSCCCEEEEECCTTC-EEEEEECCCC----------CTTCEEEEE---ETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred EEecCCCCceeeEEecCCCCc-eEEEEEcCccccccccccCCCCCCEEEEE---eCCCeEEEEEecCCCcceeeEEEEec
Confidence 99999874 44566778777 999999994 35566666 58999999999875543222 2224
Q ss_pred CCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCce--EEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 309 SSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPY--IHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 309 ~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
|...|.+++|+|+ +++| ++++.||.|++||++++... ........+...+.+++|+|++.+++++ |+.+++|
T Consensus 205 h~~~v~~~~~sp~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEE-EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred ccCcEeEEEECCCCCCCCeE-EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 6678999999999 6666 99999999999999987421 2333344467789999999999988764 8999999
Q ss_pred EeeCCCCeEEEeEE
Q psy14130 382 KLHTTRNMCEPISM 395 (494)
Q Consensus 382 ~l~~~~~~~~~~~~ 395 (494)
++.. ....+++..
T Consensus 284 ~~~~-~~~~~~~~~ 296 (379)
T 3jrp_A 284 KENL-EGKWEPAGE 296 (379)
T ss_dssp EEEE-TTEEEEEEE
T ss_pred eCCC-CCccccccc
Confidence 9987 335555543
No 45
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-31 Score=253.59 Aligned_cols=246 Identities=17% Similarity=0.204 Sum_probs=186.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||...|++++|+| ++++|+||+.|++|+ +|+....+.. ..+
T Consensus 62 ~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~-~wd~~~~~~~--~~~---------------------------------- 103 (319)
T 3frx_A 62 KGHSHIVQDCTLTA-DGAYALSASWDKTLR-LWDVATGETY--QRF---------------------------------- 103 (319)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEETTSEEE-EEETTTTEEE--EEE----------------------------------
T ss_pred eCCcccEEEEEECC-CCCEEEEEeCCCEEE-EEECCCCCee--EEE----------------------------------
Confidence 58999999999999 899999999999999 8875332210 000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
......+..+.+++....++.. +. +++|++||+..
T Consensus 104 --------------------------------~~h~~~v~~~~~~~~~~~l~s~-s~--------D~~i~vwd~~~---- 138 (319)
T 3frx_A 104 --------------------------------VGHKSDVMSVDIDKKASMIISG-SR--------DKTIKVWTIKG---- 138 (319)
T ss_dssp --------------------------------ECCSSCEEEEEECTTSCEEEEE-ET--------TSCEEEEETTS----
T ss_pred --------------------------------ccCCCcEEEEEEcCCCCEEEEE-eC--------CCeEEEEECCC----
Confidence 0000111122222222112221 22 23799999863
Q ss_pred CCcccceEecccccccEEEEEEcCCC-----CCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEE
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTA-----ENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~ 237 (494)
..+..+.+|...|.+++|+|.. ...|++++.|+.|++||+++++....+.+|...|.+++|+|+|++|+++
T Consensus 139 ----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 139 ----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred ----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 4567888999999999999853 2489999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe------eecCCC
Q psy14130 238 CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE------TVDSSS 311 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~ 311 (494)
+.|++|++||+++++.+..+..+. . +..++|+|+ +.+++++ .+..+++|++.......... ...+..
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~~~-~-v~~~~~sp~-~~~la~~----~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSAQD-E-VFSLAFSPN-RYWLAAA----TATGIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEECCS-C-EEEEEECSS-SSEEEEE----ETTEEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred eCCCeEEEEECCCCcEEEEecCCC-c-EEEEEEcCC-CCEEEEE----cCCCcEEEEeCcCeeeeccCccccccccCcCc
Confidence 999999999999999888887654 3 899999998 5566666 36679999987532211111 012345
Q ss_pred ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 312 GVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
.+.+++|+|||++| ++|+.||.|++||+.++
T Consensus 288 ~v~~~~~spdg~~l-~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 288 HAVSLAWSADGQTL-FAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CEEEEEECTTSSEE-EEEETTSCEEEEEEEEC
T ss_pred ceeEEEECCCCCEE-EEeecCceEEEEEEeec
Confidence 68899999999999 89999999999999875
No 46
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-32 Score=258.21 Aligned_cols=257 Identities=20% Similarity=0.314 Sum_probs=185.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||...|++++|+| ++++|+||+.|++++ +|+.......+...+
T Consensus 58 ~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~-iw~~~~~~~~~~~~~---------------------------------- 101 (345)
T 3fm0_A 58 EGHQRTVRKVAWSP-CGNYLASASFDATTC-IWKKNQDDFECVTTL---------------------------------- 101 (345)
T ss_dssp SSCSSCEEEEEECT-TSSEEEEEETTSCEE-EEEECCC-EEEEEEE----------------------------------
T ss_pred cccCCcEEEEEECC-CCCEEEEEECCCcEE-EEEccCCCeEEEEEc----------------------------------
Confidence 68999999999999 899999999999999 887532211000000
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
......+..+.++|....++..+ . ++.|++||+.++...
T Consensus 102 --------------------------------~~h~~~v~~v~~sp~~~~l~s~s-~--------D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 102 --------------------------------EGHENEVKSVAWAPSGNLLATCS-R--------DKSVWVWEVDEEDEY 140 (345)
T ss_dssp --------------------------------CCCSSCEEEEEECTTSSEEEEEE-T--------TSCEEEEEECTTSCE
T ss_pred --------------------------------cCCCCCceEEEEeCCCCEEEEEE-C--------CCeEEEEECCCCCCe
Confidence 00011122233333221122211 2 247999999876321
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
..+..+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++ +...+.+|...|++++|+|+|++|++++.|
T Consensus 141 ----~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 141 ----ECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp ----EEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ----EEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 3456788999999999999998 699999999999999998875 457789999999999999999999999999
Q ss_pred CeEEEEeCCCC---------------ceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc---
Q psy14130 241 KTVRVLDPRTG---------------LVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP--- 301 (494)
Q Consensus 241 ~~v~iwd~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~--- 301 (494)
++|++||.... +++..+.+ |... +..++|+++++.+++++ .|+.|++|+......+
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~----~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT-IYDIAWCQLTGALATAC----GDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC-EEEEEECTTTCCEEEEE----TTSCEEEEEECTTSCTTSC
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc-EEEEEEecCCCEEEEEe----CCCeEEEEEeCCCCCccee
Confidence 99999996432 23444544 5555 89999999966665555 8999999998653321
Q ss_pred e-eE--e-eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 302 L-AL--E-TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 302 ~-~~--~-~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
. .. . ...|...|.+++|+|++..++++|+.||.|++|++.+++.+
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 1 11 1 12466889999999998644499999999999999988753
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.7e-31 Score=251.65 Aligned_cols=217 Identities=14% Similarity=0.197 Sum_probs=168.6
Q ss_pred ecccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCC---------eEEEEecCCCCceEEEEEcCC--CCEEEEE
Q psy14130 171 DLHGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKG---------EALTVIDCHPDVINCLSFNRD--GSRLVTT 237 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~ 237 (494)
.+.+|...|.+++|+| ++ .+|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|+ +.+|+++
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred eeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe
Confidence 4556999999999999 46 79999999999999999887 668888899999999999999 9999999
Q ss_pred eCCCeEEEEeCCCCceEEEee-------------ecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 238 CKDKTVRVLDPRTGLVISQGV-------------CHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 238 ~~d~~v~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+.|+.|++||+++++.+..+. .|... +..+.|+|+ .+.++++| +.++.+.+|+........
T Consensus 131 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 131 GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS-DFCLSWCPSRFSPEKLAVS---ALEQAIIYQRGKDGKLHV 206 (351)
T ss_dssp ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC-CEEEEECCCSSSCCEEEEE---ETTEEEEEEECTTSCEEE
T ss_pred cCCCcEEEecCCChHHhccccccccccccccccCCcccc-eeEEEeccCCCCCcEEEEe---cCCCcEEEEccCCCceee
Confidence 999999999999887544432 34555 889999997 34555555 489999888776543322
Q ss_pred eEeeecCCCceEEeEEeCCC----CEEEEEEeCCCcEEEEEeeCCCce--------------------------------
Q psy14130 303 ALETVDSSSGVLFPYYDHDT----RILFLAGKGDGNIRYYELTNERPY-------------------------------- 346 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~----~~l~~~g~~dg~i~~wd~~~~~~~-------------------------------- 346 (494)
......|...|.+++|+|++ ++| ++|+.||.|++||++.+...
T Consensus 207 ~~~~~~h~~~i~~~~~~p~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (351)
T 3f3f_A 207 AAKLPGHKSLIRSISWAPSIGRWYQLI-ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTE 285 (351)
T ss_dssp EEECCCCCSCEEEEEECCCSSCSSEEE-EEEETTSCEEEEEEEECC----------------------------------
T ss_pred eeecCCCCcceeEEEECCCCCCcceEE-EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccc
Confidence 22333466889999999998 555 99999999999999875210
Q ss_pred ----------EEeccc-ccCCCCeeEEEEecCCceeeec--cceeEEEEeeCCCCeEEEeE
Q psy14130 347 ----------IHFLNQ-SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 347 ----------~~~~~~-~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 394 (494)
...+.. ..+..+|.+++|+|++.+++++ |+.+++|++..+ +..+.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~ 345 (351)
T 3f3f_A 286 EKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS-NEFKCMS 345 (351)
T ss_dssp -----CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT-SCEEEEE
T ss_pred eeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC-cchhhee
Confidence 011111 1246789999999999988875 899999999983 3455444
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=264.76 Aligned_cols=201 Identities=11% Similarity=0.126 Sum_probs=161.6
Q ss_pred ccccEEEEE--EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 175 HKRRVGYIE--WHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 175 h~~~V~~~~--~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
+...+.++. +++++ .+|++|+.|+.|++||+++++.+..+.+ |.+.|++++|+|++++|++|+.||.|++||+++
T Consensus 167 ~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred cccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 556677777 56777 7999999999999999999999999988 899999999999999999999999999999999
Q ss_pred CceEEEee-ecCCCCceEEEEECC---CCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-------------------
Q psy14130 251 GLVISQGV-CHPGTRSSKAVFIGD---TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV------------------- 307 (494)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~~~---~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~------------------- 307 (494)
++++..+. .|... +..++|+|. ++.++++| +.|+.|++||+++......+...
T Consensus 246 ~~~~~~~~~~~~~~-v~~~~~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 246 NVLIRSWSFGDHAP-ITHVEVCQFYGKNSVIVVGG---SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp TEEEEEEBCTTCEE-EEEEEECTTTCTTEEEEEEE---STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred ccEEEEEecCCCCc-eEEEEeccccCCCccEEEEE---cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 99988886 55554 888877763 36688888 79999999999875533322211
Q ss_pred -----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc------------------------------
Q psy14130 308 -----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ------------------------------ 352 (494)
Q Consensus 308 -----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~------------------------------ 352 (494)
.+...|.+++|+ ++++| ++|+.||.|++||+.+++....+...
T Consensus 322 ~~~~~~~~~~v~~l~~~-~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (437)
T 3gre_A 322 NFCGIRSLNALSTISVS-NDKIL-LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHS 399 (437)
T ss_dssp CCCCCCSGGGGCCEEEE-TTEEE-EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC------
T ss_pred eecccccCCceEEEEEC-CceEE-EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccc
Confidence 144568889999 66666 99999999999999998865444321
Q ss_pred ----ccCCCCeeEEEEecC--Cceeeec--cceeEEEE
Q psy14130 353 ----SLSGAPQRGLGFMPK--RGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 353 ----~~~~~~v~~~~~~p~--~~~~~~~--~~~~~~~~ 382 (494)
..+...|.+++|+++ +.+++++ |+.+++|+
T Consensus 400 ~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 400 VDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 015788999999998 7777775 89999994
No 49
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-30 Score=246.01 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=174.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++...... .....+.+|...|.+++|+ + .+|++++.|+.|++|| .++.+..+..|...+.+++|.
T Consensus 81 g~i~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 81 TMINGVPLFATSGE----DPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp SCEEEEETTCCTTS----CC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred CeEEEEEeeecCCC----CcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 46999999875332 4456778999999999993 4 5999999999999999 678888899999999999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 229 R-DGSRLVTTCKDKTVRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 229 ~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
| ++.++++++.|+.|++|| .++....+.. |... +..+.|++++ .++ +| +.|+.|++||+++......+
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~-i~~~~~~~~~-~~~-~~---~~dg~i~i~d~~~~~~~~~~-- 221 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDV-VRHLAVVDDG-HFI-SC---SNDGLIKLVDMHTGDVLRTY-- 221 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSC-EEEEEEEETT-EEE-EE---ETTSEEEEEETTTCCEEEEE--
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCccc-EEEEEEcCCC-eEE-Ec---cCCCeEEEEECCchhhhhhh--
Confidence 8 899999999999999999 4566777776 5555 9999999984 455 44 48999999999876543322
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
..+...+.+++|+|++ .| ++++.||.|++||+.+++....+.. +..++.+++|+|++.+++.+ |+.+++|++..
T Consensus 222 ~~~~~~i~~~~~~~~~-~l-~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 222 EGHESFVYCIKLLPNG-DI-VSCGEDRTVRIWSKENGSLKQVITL---PAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp ECCSSCEEEEEECTTS-CE-EEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred hcCCceEEEEEEecCC-CE-EEEecCCEEEEEECCCCceeEEEec---cCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 2466889999999999 45 7889999999999999987544422 35689999999999866554 99999999987
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-31 Score=255.70 Aligned_cols=177 Identities=20% Similarity=0.348 Sum_probs=152.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-CCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-ENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++|++||+.++ +.+..+.+|...|.+++|+|+. .++|++|+.|++|++||+++++++..+.+|...|++++|
T Consensus 176 ~~v~lwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 176 GTCALWDVESG-------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CcEEEEeCCCC-------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 47999999988 6778899999999999998852 279999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+|++.+|++++.|++|++||+++++.+..+..+.. ..+..+.|+|+ +.++++| +.|+.|++||+.+...... .
T Consensus 249 ~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~l~~g---~~d~~i~vwd~~~~~~~~~--l 322 (354)
T 2pbi_B 249 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS-GRLLFAG---YNDYTINVWDVLKGSRVSI--L 322 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT-SSEEEEE---ETTSCEEEEETTTCSEEEE--E
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC-CCEEEEE---ECCCcEEEEECCCCceEEE--E
Confidence 99999999999999999999999887766654432 22678899998 5566666 5899999999987553322 2
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEE
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd 339 (494)
..|...|.+++|+|++++| ++|+.||.|++|+
T Consensus 323 ~~h~~~v~~l~~spdg~~l-~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 323 FGHENRVSTLRVSPDGTAF-CSGSWDHTLRVWA 354 (354)
T ss_dssp CCCSSCEEEEEECTTSSCE-EEEETTSEEEEEC
T ss_pred ECCCCcEEEEEECCCCCEE-EEEcCCCCEEecC
Confidence 3577899999999999999 9999999999995
No 51
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-31 Score=261.56 Aligned_cols=204 Identities=15% Similarity=0.157 Sum_probs=155.5
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEE-------EecCCCCceEEEEEcCCC-CEEEEEeCCCe
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALT-------VIDCHPDVINCLSFNRDG-SRLVTTCKDKT 242 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~-------~~~~h~~~v~~l~~~~~~-~~l~s~~~d~~ 242 (494)
+.+|...|.+++|+|++ .+|++| .|+.|++||+.+ ++.+. .+.+|...|++++|+|++ ++|++|+.|+.
T Consensus 173 ~~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 173 ANAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp CSCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred ccCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 46899999999999998 799998 799999999984 44444 256899999999999998 99999999999
Q ss_pred EEEEeCCCCce----EEEeeecCC-----------CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC-CCCceeEee
Q psy14130 243 VRVLDPRTGLV----ISQGVCHPG-----------TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND-LNTPLALET 306 (494)
Q Consensus 243 v~iwd~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~-~~~~~~~~~ 306 (494)
|++||+++++. +..+..|.. ..+..+.|+|++ .++++| +. +.|++||+++ ......+..
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~---~~-~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTR---DY-LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEE---ES-SEEEEEETTCCSSCSCCEES
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEe---eC-CeEEEEeCCCCccccceeec
Confidence 99999999886 788888875 138999999985 455555 35 9999999986 333322322
Q ss_pred ecCCC-------------ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc----------------------
Q psy14130 307 VDSSS-------------GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN---------------------- 351 (494)
Q Consensus 307 ~~~~~-------------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~---------------------- 351 (494)
..... .+..++|+|++++| ++|+.||.|++||+.+++.+.....
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRK 404 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCC
T ss_pred cccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcc
Confidence 11000 12348999999999 9999999999999998875421110
Q ss_pred -------cccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 352 -------QSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 352 -------~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.......|..++|+|++..++++ .+.+.+|.-
T Consensus 405 ~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 405 KDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp TTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred cccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 11234578999999999988875 556777753
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3e-31 Score=256.71 Aligned_cols=222 Identities=12% Similarity=0.110 Sum_probs=174.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE----EEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA----LTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~h~~~v~~ 224 (494)
+.|++||+.++.. .....+.+|...|.+++|+|++ .+|++++.|+.|++||+..++. .....+|...|.+
T Consensus 74 g~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 74 RNAYVWTLKGRTW-----KPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp SCEEEEEEETTEE-----EEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CeEEEEECCCCee-----eeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 4799999987632 2234457799999999999998 7999999999999999987752 3334678999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC------------------CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPR------------------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
++|+|++++|++++.|+.|++||++ .++.+..+..|... +..+.|+|++. ++++| +.
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~-~l~~~---~~ 222 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-VHGVCFSANGS-RVAWV---SH 222 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSSSS-EEEEE---ET
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe-EEEEEECCCCC-EEEEE---eC
Confidence 9999999999999999999999954 67788888888887 99999999855 45555 48
Q ss_pred CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC--CCceE-----------------
Q psy14130 287 DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN--ERPYI----------------- 347 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~--~~~~~----------------- 347 (494)
|+.|++||+++......+ ..+...+.+++|+|+++++ ++| .|+.|++|++.+ ++...
T Consensus 223 d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (372)
T 1k8k_C 223 DSTVCLADADKKMAVATL--ASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 298 (372)
T ss_dssp TTEEEEEEGGGTTEEEEE--ECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CH
T ss_pred CCEEEEEECCCCceeEEE--ccCCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcch
Confidence 999999999876543332 2355689999999999877 666 999999999998 42000
Q ss_pred -----------E--------ecccccCCCCeeEEEEe-cCC---ceeeec--cceeEEEEeeC
Q psy14130 348 -----------H--------FLNQSLSGAPQRGLGFM-PKR---GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 348 -----------~--------~~~~~~~~~~v~~~~~~-p~~---~~~~~~--~~~~~~~~l~~ 385 (494)
. ......+..+|.+++|. +++ .+++++ |+.+++|++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 299 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0 00011456789999977 565 677764 99999999876
No 53
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-31 Score=282.88 Aligned_cols=211 Identities=10% Similarity=0.066 Sum_probs=133.0
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.||.+.|++++|+| ++++||+|+.||+|+ +|+........ .... .. .-..++.++.. .+.....++.+.++
T Consensus 14 ~gh~~~V~~lafsp-dg~~lAsgs~Dg~I~-lw~~~~~~~~~--~~~~-~~--~V~~l~fspg~--~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 14 YGMSSKPIAAAFDF-TQNLLAIATVTGEVH-IYGQQQVEVVI--KLED-RS--AIKEMRFVKGI--YLVVINAKDTVYVL 84 (902)
T ss_dssp EECSSCEEEEEEET-TTTEEEEEETTSEEE-EECSTTCEEEE--ECSS-CC--CEEEEEEETTT--EEEEEETTCEEEEE
T ss_pred cCCCCCcEEEEECC-CCCEEEEEeCCCEEE-EEeCCCcEEEE--EcCC-CC--CEEEEEEcCCC--EEEEEECcCeEEEE
Confidence 58999999999999 899999999999999 88754322111 0100 00 00001111111 11222233444443
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+... .++..+. ....+..+.++|....++... .++.|++||+.++...
T Consensus 85 d~~~~-------------------~~~~~~~---~~~~V~~v~~sp~g~~l~sgs---------~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 85 SLYSQ-------------------KVLTTVF---VPGKITSIDTDASLDWMLIGL---------QNGSMIVYDIDRDQLS 133 (902)
T ss_dssp ETTTC-------------------SEEEEEE---CSSCEEEEECCTTCSEEEEEE---------TTSCEEEEETTTTEEE
T ss_pred ECCCC-------------------cEEEEEc---CCCCEEEEEECCCCCEEEEEc---------CCCcEEEEECCCCccc
Confidence 33210 0011111 011223333443322222222 2347999999877421
Q ss_pred CCccc-----ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------------------C
Q psy14130 163 GNLNE-----WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH------------------P 219 (494)
Q Consensus 163 ~~~~~-----~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------------------~ 219 (494)
.+.. ....+.+|...|.+++|+|++...|++|+.|+.| +||+++++++..+..| .
T Consensus 134 -~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 134 -SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp -EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred -cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccC
Confidence 0000 0024578999999999999754689999999999 9999999998888766 5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
..|++++|+|+|++|++++.|++|++||+++++++.
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 779999999999999999999999999998877543
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-32 Score=271.18 Aligned_cols=228 Identities=9% Similarity=0.036 Sum_probs=176.9
Q ss_pred CcEEEEEcCCCCCCC----CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSG----NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~----~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~ 223 (494)
++|+|||+.++.... ....+...+.+|...|++++|+++ ..|++|+.||+|++||++++ .+...+.+|...|+
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~ 312 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL 312 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEE
Confidence 479999998764321 122345678899999999999986 48999999999999999876 35567889999999
Q ss_pred EE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 224 CL--SFNRDG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 224 ~l--~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+| +|+|+| .+|+||+.|++|+|||+++++++..+.+|... .+.+++|+|++.. ++++ +.|++|++||+++..
T Consensus 313 sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~---~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 313 SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYS---DGASSLRAVPSRAAF 388 (524)
T ss_dssp EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEE---CSSSEEEEEETTCTT
T ss_pred EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEe---CCCCcEEEEECcccc
Confidence 99 578887 89999999999999999998877777777542 2678999998554 5555 589999999999866
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--------------eEEe----------------
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--------------YIHF---------------- 349 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--------------~~~~---------------- 349 (494)
....+. .|...|.+++|+|+++.| ++|+.||+|++||+..... +...
T Consensus 389 ~~~~l~--gH~~~V~sva~Sp~g~~l-~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~ 465 (524)
T 2j04_B 389 AVHPLV--SRETTITAIGVSRLHPMV-LAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYE 465 (524)
T ss_dssp CCEEEE--ECSSCEEEEECCSSCCBC-EEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCC
T ss_pred cceeee--cCCCceEEEEeCCCCCeE-EEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCce
Confidence 544443 477899999999999998 9999999999998643210 0000
Q ss_pred -----------cccccCCCCeeEEEEecCCc---eeeec--cceeEEEEeeC
Q psy14130 350 -----------LNQSLSGAPQRGLGFMPKRG---CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 350 -----------~~~~~~~~~v~~~~~~p~~~---~~~~~--~~~~~~~~l~~ 385 (494)
..-..+..+|.+++|+|++. .++++ ++.+|||++..
T Consensus 466 ~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 466 VYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 00012456889999999964 66664 79999999876
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-30 Score=248.85 Aligned_cols=220 Identities=17% Similarity=0.217 Sum_probs=184.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecc--cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLH--GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVIN 223 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~ 223 (494)
.+.|++|++.++... .....+. +|...|.+++|+|++ ++|++++.|+.|++||+.+++ ....+..|...|.
T Consensus 71 dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 71 KGCVKVWDISHPGNK----SPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp BSEEEEEETTSTTCC----SCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred CCeEEEEECCCCCce----eeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE
Confidence 347999999887533 2223333 799999999999998 799999999999999999887 6677888999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+++|+|++++|++++.|+.|++||+++++.+..+..|... +..+.|+|++..+++++ .|+.|++||+++...
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~--- 217 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISNDGTKLWTGG----LDNTVRSWDLREGRQ--- 217 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEE----TTSEEEEEETTTTEE---
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc-eEEEEECCCCCEEEEEe----cCCcEEEEECCCCce---
Confidence 9999999999999999999999999999999999988887 99999999855555544 899999999987543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
.....+...+.+++|+|+++.+ ++++.|+.|++||+.+++.. .. ..+..++.+++|+|++.+++++ ++.+++|
T Consensus 218 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~i~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 218 LQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLHVNKPDKY-QL---HLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEETTSSCEE-EE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EeeecCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCCeE-EE---cCCccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 2334466789999999999998 88889999999999988752 22 2346789999999999988775 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 293 ~~~~ 296 (337)
T 1gxr_A 293 RTPY 296 (337)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9987
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-31 Score=252.73 Aligned_cols=183 Identities=21% Similarity=0.336 Sum_probs=141.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG--EALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~l~ 226 (494)
++|+|||+...... .+.+..+.+|...|.+++|+|++ .+|++|+.|++|++||..++ +++..+.+|.+.|.+++
T Consensus 129 ~~v~iwd~~~~~~~---~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 129 KSVWIWETDESGEE---YECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp SCEEEEECCTTCCC---CEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeccCCCCC---eEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 47999999543211 14567788999999999999998 79999999999999999776 67888999999999999
Q ss_pred EcCC--CCEEEEEeCCCeEEEEeCCCC--------ceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 227 FNRD--GSRLVTTCKDKTVRVLDPRTG--------LVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 227 ~~~~--~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
|+|+ +.+|++++.|++|++||++.+ .+...+.. |... +..++|+++ +.++++| .|+.|++||.
T Consensus 205 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~s~~-~~l~s~~----~dg~v~iw~~ 278 (330)
T 2hes_X 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ-VYNVAWGFN-GLIASVG----ADGVLAVYEE 278 (330)
T ss_dssp ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC-EEEEEECTT-SCEEEEE----TTSCEEEEEE
T ss_pred ecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccc-eEEEEEcCC-CEEEEEe----CCCEEEEEEc
Confidence 9998 779999999999999998764 33444444 6666 899999865 5555555 8999999998
Q ss_pred CCCCCceeEee-ecCCC-ceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeC
Q psy14130 296 NDLNTPLALET-VDSSS-GVLFPYYDH--DTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 296 ~~~~~~~~~~~-~~~~~-~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
.+......... ..|.. .+.+++|+| ++++| ++|+.||.|++||++.
T Consensus 279 ~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l-as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 279 VDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL-ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ETTEEEEEEEESCTTTTSCEEEEEEC-----CCE-EEEETTSEEEEEEC--
T ss_pred CCCceEEEeccccccccceEEEEEEecCCCceEE-EEecCCCcEEEEEecc
Confidence 75421111111 23444 799999999 67777 9999999999999865
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.9e-32 Score=262.47 Aligned_cols=180 Identities=14% Similarity=0.149 Sum_probs=136.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecC-CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDC-HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~-h~~~v~~ 224 (494)
+.|++||+.++... .+...+.+|...|.+++|+|++ ++|++|+.|+.|++||+++++ ....+.. |...|++
T Consensus 77 ~~v~vwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~ 151 (377)
T 3dwl_C 77 RNAYVYEKRPDGTW----KQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILS 151 (377)
T ss_dssp SSEEEC------CC----CCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEE
T ss_pred CeEEEEEcCCCCce----eeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEE
Confidence 47999999987411 3566788899999999999998 799999999999999999887 3677877 9999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC------------------CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 225 LSFNRDGSRLVTTCKDKTVRVLDPR------------------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
++|+|++++|++++.|+.|++||++ .++++..+ .|... +..++|+|++..+++++ .
T Consensus 152 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~~~~sp~~~~l~~~~----~ 225 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-VHAVGFSPSGNALAYAG----H 225 (377)
T ss_dssp EEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-EEEEEECTTSSCEEEEE----T
T ss_pred EEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce-EEEEEECCCCCEEEEEe----C
Confidence 9999999999999999999999985 34466666 77777 99999999955455444 8
Q ss_pred CceEEEEeCCCCCCcee--EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 287 DRQVGLWDENDLNTPLA--LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
|+.|++||+++...+.. .....+...+.+++|+|++++| ++|+.|+.+ +|+..
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIV-AAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEE-EEESSSSEE-EECCC
T ss_pred CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEE-EEEcCCcEE-EEEeC
Confidence 99999999998765221 1222466789999999999888 777655555 66665
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-30 Score=277.55 Aligned_cols=219 Identities=19% Similarity=0.277 Sum_probs=184.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++++.||+|++||+.++ .....+.+|...|.+++|
T Consensus 77 g~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 77 FRIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp SEEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred CeEEEEECCCC-------cEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 47999999988 6777889999999999999998 69999999999999999887 677888999999999999
Q ss_pred cC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC--CCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 228 NR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG--DTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+| ++..|++++.|+.|++||+++++....+..+....+..+.|+| + +.++++| +.|+.|++||+++......+
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~---~~dg~i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD-KPYMITA---SDDLTIKIWDYQTKSCVATL 224 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTT-CCEEEEE---CTTSEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCC-CCEEEEE---eCCCEEEEEECCCCcEEEEE
Confidence 99 8899999999999999999998887777777644489999998 6 5566666 68999999999875432222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc--eeee-ccceeEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG--CDVT-QCEIFRFF 381 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~~~-~~~~~~~~ 381 (494)
..+...+.+++|+|+++.+ ++|+.||.|++||+.+++....+.. +..++.+++|+|++. ++++ .++.+.+|
T Consensus 225 --~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (814)
T 3mkq_A 225 --EGHMSNVSFAVFHPTLPII-ISGSEDGTLKIWNSSTYKVEKTLNV---GLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (814)
T ss_dssp --ECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCSEEEEECC---SSSSEEEEEECTTCGGGEEEEEETTEEEEE
T ss_pred --cCCCCCEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEEEeec---CCCcEEEEEEccCCCceEEEEEeCCCEEEE
Confidence 2366789999999999988 8999999999999999886544432 256899999999986 2444 48888899
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 299 ~~~~ 302 (814)
T 3mkq_A 299 SLGN 302 (814)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 8765
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-30 Score=290.72 Aligned_cols=329 Identities=17% Similarity=0.237 Sum_probs=230.6
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
+||.+.|++++|+| ++++|+||+.||+|+ +|+....+.. ..+..... .-..++.+++...++. ...++.+.++
T Consensus 612 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~-vw~~~~~~~~--~~~~~h~~--~v~~~~~s~~~~~l~s-~~~d~~v~vw 684 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQ-DGQRIASCGADKTLQ-VFKAETGEKL--LDIKAHED--EVLCCAFSSDDSYIAT-CSADKKVKIW 684 (1249)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEE-EEETTTCCEE--EEECCCSS--CEEEEEECTTSSEEEE-EETTSEEEEE
T ss_pred ecccccEEEEEECC-CCCEEEEEeCCCeEE-EEECCCCCEE--EEeccCCC--CEEEEEEecCCCEEEE-EeCCCeEEEE
Confidence 58999999999999 899999999999999 8886544321 11111000 0011122222221111 2233444444
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEE--EcCcEEEEEcCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL--PIHRVKLWYIPDGG 160 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~iw~~~~~~ 160 (494)
.+... +.. ..+. ........+.+++ .+++.+++. .++.|++||+.++
T Consensus 685 d~~~~------~~~-------------~~~~--~~~~~v~~~~~~~---------~~~~~~l~sg~~d~~v~vwd~~~~- 733 (1249)
T 3sfz_A 685 DSATG------KLV-------------HTYD--EHSEQVNCCHFTN---------KSNHLLLATGSNDFFLKLWDLNQK- 733 (1249)
T ss_dssp ETTTC------CEE-------------EEEE--CCSSCEEEEEECS---------SSSCCEEEEEETTSCEEEEETTSS-
T ss_pred ECCCC------ceE-------------EEEc--CCCCcEEEEEEec---------CCCceEEEEEeCCCeEEEEECCCc-
Confidence 43211 000 0110 1112222333333 111112111 1247999999988
Q ss_pred CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------------------------
Q psy14130 161 LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI------------------------- 215 (494)
Q Consensus 161 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~------------------------- 215 (494)
.....+.+|...|.+++|+|++ .+|++++.||+|++||+.+++....+
T Consensus 734 ------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 734 ------ECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp ------SEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred ------chhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 6778889999999999999998 79999999999999999776544332
Q ss_pred ------------------------------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCc
Q psy14130 216 ------------------------------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRS 265 (494)
Q Consensus 216 ------------------------------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 265 (494)
.+|...|.+++|+|+++++++++.|+.|++||+.++..+..+.+|... +
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~-v 885 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW-V 885 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC-E
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc-e
Confidence 167788999999999999999999999999999999999999999988 9
Q ss_pred eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc----------------------------eeE-------eeecCC
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP----------------------------LAL-------ETVDSS 310 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~----------------------------~~~-------~~~~~~ 310 (494)
..+.|+|++..+++++ .|+.|++||+.+.... ... ......
T Consensus 886 ~~v~~spdg~~l~s~s----~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTAS----DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp EEEEECTTSSEEEEEE----TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred EEEEECCCCCEEEEEe----CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 9999999865555555 8999999996531100 000 001123
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
..+.+++|+|+++++ ++|+.||.|++||+.+++...... .+...|.+++|+|++..++++ |+.+++|++..
T Consensus 962 ~~i~~~~~sp~g~~l-~~g~~~g~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYV-AFGDEDGAIKIIELPNNRVFSSGV---GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCCEEEETTTTSCEEECC---CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred CcEEEEEEcCCCCEE-EEEcCCCCEEEEEcCCCceeeecc---cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 568899999999998 899999999999999988654332 346789999999999988875 89999999876
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.98 E-value=1.4e-29 Score=239.23 Aligned_cols=221 Identities=20% Similarity=0.357 Sum_probs=183.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++|++.++ +....+.+|...|.+++|+|++ ++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 45 g~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 45 KLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 116 (312)
T ss_dssp SCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEeCCCc-------ccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 47999999887 5667888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
|++++|++++.|+.|++||+++++.+..+..|... +..+.|++++. ++++| +.|+.|++||+++...... ....
T Consensus 117 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~-~l~~~---~~d~~i~~wd~~~~~~~~~-~~~~ 190 (312)
T 4ery_A 117 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGS-LIVSS---SYDGLCRIWDTASGQCLKT-LIDD 190 (312)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSS-EEEEE---ETTSCEEEEETTTCCEEEE-ECCS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCC-EEEEE---eCCCcEEEEECCCCceeeE-Eecc
Confidence 99999999999999999999999999999999887 89999999854 55555 4899999999987543222 2223
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCceeeec--cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+...+..++|+|++++| ++++.||.|++||+++++.+..+.. +..........++ +++.+++++ |+.+++|++..
T Consensus 191 ~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 191 DNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSKGKCLKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp SCCCEEEEEECTTSSEE-EEEETTTEEEEEETTTTEEEEEECS-SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred CCCceEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEEe-cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 45678899999999999 8899999999999999887544432 2222222333444 567777765 88999999987
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=6.7e-30 Score=253.88 Aligned_cols=216 Identities=19% Similarity=0.353 Sum_probs=178.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
++.|++||+.++ +.+..+.+|...|.+++| ++ .++++|+.|+.|++||+++++.+..+.+|...|.+++|
T Consensus 218 dg~i~~wd~~~~-------~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 218 DATLRVWDIETG-------QCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp TSEEEEEESSSC-------CEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEEECCCC-------cEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 347999999988 677788899999999999 44 68999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
++.++++++.|+.|++||+++++.+..+.+|... +..+.+.+ .++++| +.|+.|++||+++......+...
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~---~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~ 358 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMELKD---NILVSG---NADSTVKIWDIKTGQCLQTLQGP 358 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEEET---TEEEEE---ETTSCEEEEETTTCCEEEEECST
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc-EEEEEEeC---CEEEEE---eCCCeEEEEECCCCcEEEEEccC
Confidence 7899999999999999999999999999999876 67666643 355555 58999999999876543333221
Q ss_pred -cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec--ccccCCCCeeEEEEecCCceeeec--cce----e
Q psy14130 308 -DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL--NQSLSGAPQRGLGFMPKRGCDVTQ--CEI----F 378 (494)
Q Consensus 308 -~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~~~~--~~~----~ 378 (494)
.+...|.+++|+ +++| ++|+.||.|++||+.+++.+..+. ....+..+|.+++|+|++.+++++ |+. +
T Consensus 359 ~~~~~~v~~~~~~--~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 359 NKHQSAVTCLQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp TSCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred CCCCCCEEEEEEC--CCEE-EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 255788999885 4666 899999999999999998765552 223456889999999999988775 665 8
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.+|++..
T Consensus 436 ~v~df~~ 442 (445)
T 2ovr_B 436 LVLDFDV 442 (445)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8898876
No 62
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=1.4e-29 Score=242.53 Aligned_cols=224 Identities=15% Similarity=0.194 Sum_probs=180.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
++|+|||+.+.........+...+.+|...|.+++|+|++ .+|++|+.|++|++||+++++.+..+.+|...|.+++|+
T Consensus 49 ~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~s 127 (343)
T 2xzm_R 49 KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFS 127 (343)
T ss_dssp SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEEC
T ss_pred CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEEC
Confidence 4799999987643333335667889999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEee---ecCCCCceEEEEECCCC---------eEEEEEecCCCCceEEEEeCC
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGV---CHPGTRSSKAVFIGDTG---------RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~l~~~g~~~~~d~~i~iwd~~ 296 (494)
|++++|++++.|++|++||+.. ....... .|... +..+.|+|++. .++++| +.|+.|++||..
T Consensus 128 p~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~iwd~~ 202 (343)
T 2xzm_R 128 PDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDW-VSCVRYSPIMKSANKVQPFAPYFASV---GWDGRLKVWNTN 202 (343)
T ss_dssp SSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSC-EEEEEECCCCCSCSCCCSSCCEEEEE---ETTSEEEEEETT
T ss_pred CCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCce-eeeeeeccccccccccCCCCCEEEEE---cCCCEEEEEcCC
Confidence 9999999999999999999984 3333333 56666 88999998752 456666 589999999943
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-c
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C 375 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~ 375 (494)
. . .......|...|.+++|+|++++| ++|+.||.|++||+......... +.....|.+++|+|++.+++++ +
T Consensus 203 ~-~--~~~~~~~h~~~v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~~~~~---~~~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 203 F-Q--IRYTFKAHESNVNHLSISPNGKYI-ATGGKDKKLLIWDILNLTYPQRE---FDAGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp T-E--EEEEEECCSSCEEEEEECTTSSEE-EEEETTCEEEEEESSCCSSCSEE---EECSSCEEEEEECSSSCEEEEEES
T ss_pred C-c--eeEEEcCccccceEEEECCCCCEE-EEEcCCCeEEEEECCCCccccee---ecCCCcEEEEEECCCCCEEEEECC
Confidence 2 2 222233567889999999999998 99999999999999543322222 2234679999999999887765 8
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 276 ~~v~iw~~~~ 285 (343)
T 2xzm_R 276 QGVKIFNLMT 285 (343)
T ss_dssp SCEEEEESSS
T ss_pred CCEEEEEeCC
Confidence 8999999876
No 63
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=5.3e-29 Score=257.45 Aligned_cols=217 Identities=19% Similarity=0.192 Sum_probs=171.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---cEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEEe-c---CCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---RVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTVI-D---CHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~---~h~~ 220 (494)
+.|++||+.++ +.+..+.+|.. .|.+++|+|+ + .+|++++.|+.|++||+.+++.+..+ . .|..
T Consensus 183 ~~v~vwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 183 GSVVFYQGPPF-------KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp TEEEEEETTTB-------EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred CcEEEEeCCCc-------ceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCC
Confidence 47999999887 67788889999 9999999999 7 79999999999999999999999998 6 8999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec----------------------------------------
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH---------------------------------------- 260 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~---------------------------------------- 260 (494)
.|.+++|+ ++++|++++.|+.|++||+++++.+..+..+
T Consensus 255 ~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~ 333 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLK 333 (615)
T ss_dssp CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEE
T ss_pred ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEE
Confidence 99999999 9999999999999999999876543332221
Q ss_pred --------------------------------------------------------------------------------
Q psy14130 261 -------------------------------------------------------------------------------- 260 (494)
Q Consensus 261 -------------------------------------------------------------------------------- 260 (494)
T Consensus 334 ~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~ 413 (615)
T 1pgu_A 334 TISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVAS 413 (615)
T ss_dssp EECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEE
T ss_pred EEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEE
Confidence
Q ss_pred --------------------------------------------------------------------------CCCCce
Q psy14130 261 --------------------------------------------------------------------------PGTRSS 266 (494)
Q Consensus 261 --------------------------------------------------------------------------~~~~~~ 266 (494)
... +.
T Consensus 414 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~-v~ 492 (615)
T 1pgu_A 414 ANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK-PS 492 (615)
T ss_dssp ECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC-EE
T ss_pred EcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCc-eE
Confidence 111 44
Q ss_pred EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec-CCCceEEeEEeC----------CCCEEEEEEeCCCcE
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD-SSSGVLFPYYDH----------DTRILFLAGKGDGNI 335 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~l~~~g~~dg~i 335 (494)
.++|+|++ .++++| +.|+.|++||+.+...... ... |...|.+++|+| ++++| ++|+.||.|
T Consensus 493 ~~~~s~~g-~~l~~~---~~dg~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l-~~~~~dg~i 565 (615)
T 1pgu_A 493 YISISPSE-TYIAAG---DVMGKILLYDLQSREVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLV-ATGSLDTNI 565 (615)
T ss_dssp EEEECTTS-SEEEEE---ETTSCEEEEETTTTEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEE-EEEETTSCE
T ss_pred EEEECCCC-CEEEEc---CCCCeEEEeeCCCCcceeE--eecCCCCceeEEEEcCccccccccccCCCEE-EEEcCCCcE
Confidence 55666663 444444 4788888888776433211 122 668899999999 99998 999999999
Q ss_pred EEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 336 RYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 336 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++||+.++......+.. +...|.+++|+|++. ++++ |+.+++|++..
T Consensus 566 ~iw~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNA--HKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEESSCTTCCEEETTS--STTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEECCCCceechhhhc--CccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999998332343333 367899999999999 7664 89999999865
No 64
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=1.3e-29 Score=242.05 Aligned_cols=182 Identities=18% Similarity=0.261 Sum_probs=151.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.+++||+.... .....+.+|...|.+++|++++. .++++++.|+.|++||+.+++.+..+.+|.+.|++++|
T Consensus 150 ~~~~~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~ 223 (340)
T 4aow_A 150 KTIKLWNTLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTV 223 (340)
T ss_dssp SCEEEECTTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CeEEEEEeCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEE
Confidence 369999987652 33455678999999999998753 47899999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE---
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--- 304 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--- 304 (494)
+|++++|++|+.|+.|++||+++++.+..+..+.. +..+.|+|+ +.+++++ .|+.|++||+++.......
T Consensus 224 s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~-~~~~~~~----~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 224 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPN-RYWLCAA----TGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC--EEEEEECSS-SSEEEEE----ETTEEEEEETTTTEEEEEECCC
T ss_pred CCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce--EEeeecCCC-Cceeecc----CCCEEEEEECCCCeEEEecccc
Confidence 99999999999999999999999999888876643 788888887 6777777 7999999999864321111
Q ss_pred ----eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 305 ----ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 305 ----~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
....+...|.+++|+|++++| ++|+.||.|++||+++|+
T Consensus 297 ~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 VISTSSKAEPPQCTSLAWSADGQTL-FAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -------CCCCCEEEEEECTTSSEE-EEEETTSCEEEEEEEC--
T ss_pred ceeeeccCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEeCCCcC
Confidence 112456789999999999998 899999999999999985
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.7e-29 Score=245.78 Aligned_cols=219 Identities=18% Similarity=0.297 Sum_probs=184.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|+|||+.++ +.+..+.+|...|.++++++ .+|++|+.|+.+++||.... ..+..+.+|...+..+.|
T Consensus 169 g~v~iWd~~~~-------~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 169 AEVQLWDVQQQ-------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEEcCCC-------cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeee
Confidence 47999999988 77888999999999998864 58999999999999998864 466788999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCc----eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGL----VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+++++++++.|+.+++||..+++ .+.....|... +..++|+|.+..+++++ +++.|+.|++||++++..
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~-V~~~~~~p~~~~~la~~-~gs~D~~I~iwd~~t~~~--- 313 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGAC--- 313 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC-EEEEEECTTCTTEEEEE-ECTTTCEEEEEETTTTEE---
T ss_pred cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc-eeeeeeCCCcccEEEEE-eecCCCEEEEEeCCcccc---
Confidence 9999999999999999999998876 34566777777 89999999988888764 226799999999987644
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
...+.....+.++.|+|+++.++++ |+.|+.|++||+.+++++..+. . |..+|.+++|+|++.+++++ |+.+|+
T Consensus 314 ~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-g--H~~~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 314 LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-G--HTSRVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred ceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-C--CCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 3334466789999999999998544 3379999999999998865543 3 46789999999999988875 999999
Q ss_pred EEeeC
Q psy14130 381 FKLHT 385 (494)
Q Consensus 381 ~~l~~ 385 (494)
|++..
T Consensus 391 Wdv~~ 395 (420)
T 4gga_A 391 WRCFE 395 (420)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 99876
No 66
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.5e-29 Score=242.71 Aligned_cols=221 Identities=15% Similarity=0.117 Sum_probs=170.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCC--CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAE--NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
++.|++||+.++ +....+. +...+.++.|+|.+. .++++++.|+.|++||+.+++.+..+.+|...|.++
T Consensus 121 d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 121 DKTLKVWDTNTL-------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp TSEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred CCeEEEeeCCCC-------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 347999999987 5555554 788899999998642 499999999999999999999999999999999999
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEeCCCCc-eEEEe---------------eecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 226 SFNRDGS-RLVTTCKDKTVRVLDPRTGL-VISQG---------------VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 226 ~~~~~~~-~l~s~~~d~~v~iwd~~~~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
+|+|+++ +|++++.|+.|++||++++. .+..+ ..|... +..++|+|++..+++++ .|+
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~dg 267 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK-VNGLCFTSDGLHLLTVG----TDN 267 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC-EEEEEECTTSSEEEEEE----TTS
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc-eeEEEEcCCCCEEEEec----CCC
Confidence 9999998 69999999999999998876 44444 456666 89999999855555544 899
Q ss_pred eEEEEeCCCCCCceeEeeec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe
Q psy14130 289 QVGLWDENDLNTPLALETVD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM 365 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 365 (494)
.|++||+++........... ....+........+..+ ++++.|+.|++||+.+++.+..+. . +..+|.+++|+
T Consensus 268 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~d~~~~~~~~~~~-~--~~~~v~~~~~s 343 (408)
T 4a11_B 268 RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF-VFVPYGSTIAVYTVYSGEQITMLK-G--HYKTVDCCVFQ 343 (408)
T ss_dssp CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE-EEEEETTEEEEEETTTCCEEEEEC-C--CSSCEEEEEEE
T ss_pred eEEEEECCCCccceeccccccccccccceeEEecCCCceE-EEEecCCEEEEEECcCCcceeeec-c--CCCeEEEEEEc
Confidence 99999998765433222111 11122222222334444 566789999999999998755443 2 35789999999
Q ss_pred cCCceeeec--cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++.+++++ |+.+++|++..
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEECC
T ss_pred CCCCEEEEECCCCeEEEEeCCC
Confidence 999888875 89999999987
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=3.4e-30 Score=287.93 Aligned_cols=220 Identities=20% Similarity=0.337 Sum_probs=186.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++|++.++ .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.. .+..|...|.+++|
T Consensus 982 ~g~i~i~d~~~~-------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 982 DGAIKIIELPNN-------RVFSSGVGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRL 1052 (1249)
T ss_dssp TSCCEEEETTTT-------SCEEECCCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEE
T ss_pred CCCEEEEEcCCC-------ceeeecccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceE-EEecCCCcEEEEEE
Confidence 457999999988 6667888999999999999998 79999999999999999998766 45679999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+|++ .+++++.|+.|++||+.+++.+..+.+|.+. +..++|+|++. ++++| +.|+.|++||+.+......+.
T Consensus 1053 ~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~s~d~~-~l~s~---s~d~~v~iwd~~~~~~~~~l~-- 1124 (1249)
T 3sfz_A 1053 LQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGT-VLSCAISSDAT-KFSST---SADKTAKIWSFDLLSPLHELK-- 1124 (1249)
T ss_dssp CSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSC-CCCEEECSSSS-SCEEE---CCSSCCCEECSSSSSCSBCCC--
T ss_pred cCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCc-EEEEEECCCCC-EEEEE---cCCCcEEEEECCCcceeeeec--
Confidence 9966 6789999999999999999999999999988 99999999955 45555 589999999998765433332
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec------ccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL------NQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
.|...|.+++|+|++++| ++|+.||.|++||+.+++...... ....+...|.+++|+|++.+++++++.+++|
T Consensus 1125 ~h~~~v~~~~~s~dg~~l-at~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vw 1203 (1249)
T 3sfz_A 1125 GHNGCVRCSAFSLDGILL-ATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWW 1203 (1249)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEB
T ss_pred cCCCcEEEEEECCCCCEE-EEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEE
Confidence 466789999999999998 999999999999999987643321 0123567899999999999999999999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++.+
T Consensus 1204 d~~~ 1207 (1249)
T 3sfz_A 1204 NVAT 1207 (1249)
T ss_dssp CSSS
T ss_pred ECCC
Confidence 9887
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=8.3e-29 Score=241.76 Aligned_cols=224 Identities=17% Similarity=0.271 Sum_probs=177.8
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccc------------------cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGH------------------KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG 209 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h------------------~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~ 209 (494)
.+.++||++.++. .+..+.+| ...|.+++|+|++ ++|++|+.|++|++||+.++
T Consensus 84 ~~~v~i~~~~~g~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~ 155 (393)
T 1erj_A 84 NKTTQVYRVSDGS-------LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENR 155 (393)
T ss_dssp BSCEEEEETTTCC-------EEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEEecCCC-------EEEEecCccccccccccccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCC
Confidence 4579999998883 33334333 2359999999998 79999999999999999999
Q ss_pred eEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 210 EALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 210 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+.+..+.+|...|++++|+|++++|++++.|++|++||++++++...+..+. . +..++++|.++.++++| +.|+.
T Consensus 156 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~---s~d~~ 230 (393)
T 1erj_A 156 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-G-VTTVAVSPGDGKYIAAG---SLDRA 230 (393)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-C-EEEEEECSTTCCEEEEE---ETTSC
T ss_pred cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC-C-cEEEEEECCCCCEEEEE---cCCCc
Confidence 9999999999999999999999999999999999999999999887776443 3 78899999557777777 69999
Q ss_pred EEEEeCCCCCCceeEe-----eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE---------ecccccC
Q psy14130 290 VGLWDENDLNTPLALE-----TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH---------FLNQSLS 355 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~---------~~~~~~~ 355 (494)
|++||+++......+. ...|...|.+++|+|++++| ++|+.|+.|++||+++...... ......+
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h 309 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 309 (393)
T ss_dssp EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEE-EEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecc
Confidence 9999998754322221 12466789999999999998 8999999999999986432110 0111234
Q ss_pred CCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 356 GAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 356 ~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
...|.+++|+|++.+++++ |+.+++|++..
T Consensus 310 ~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 310 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp SSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred cCcEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 5779999999999988875 89999999877
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=3.3e-29 Score=250.25 Aligned_cols=214 Identities=16% Similarity=0.252 Sum_probs=177.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCCeE---------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKGEA--------------- 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~~~--------------- 211 (494)
++|++||+.++ +.+..+.+|...|.+++|++ ++ .+|++|+.|++|++||+.++..
T Consensus 183 g~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 183 RTVRVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred CCEEEEECCCC-------cEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 37999999988 77788999999999999984 55 7999999999999999987652
Q ss_pred --------EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEec
Q psy14130 212 --------LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFS 283 (494)
Q Consensus 212 --------~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 283 (494)
+..+.+|...|.++ +++++++++++.|+.|++||+++++.+..+.+|... +..+.|++++..++ +|
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~-sg-- 328 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCI-SA-- 328 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEE-EE--
T ss_pred ccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEE-EE--
Confidence 55677899999887 567899999999999999999999999999999887 99999999855554 55
Q ss_pred CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEE
Q psy14130 284 RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 363 (494)
+.|+.|++||+++......+ ..|...+.++.|+ +++| ++|+.||.|++||+.+++..... .+...+..++
T Consensus 329 -~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~~~~~~----~~~~~~~~~~ 398 (464)
T 3v7d_B 329 -SMDTTIRIWDLENGELMYTL--QGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYSRKFSY----HHTNLSAITT 398 (464)
T ss_dssp -ETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEE----ECTTCCCEEE
T ss_pred -eCCCcEEEEECCCCcEEEEE--eCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCceeeee----cCCCCccEEE
Confidence 48999999999875433222 2466789999987 4666 89999999999999987754332 2356788899
Q ss_pred EecCCceeeec-cceeEEEEeeCC
Q psy14130 364 FMPKRGCDVTQ-CEIFRFFKLHTT 386 (494)
Q Consensus 364 ~~p~~~~~~~~-~~~~~~~~l~~~ 386 (494)
|+|++.+++++ ++.+++|++.++
T Consensus 399 ~~~~~~~l~~~~dg~i~iwd~~~g 422 (464)
T 3v7d_B 399 FYVSDNILVSGSENQFNIYNLRSG 422 (464)
T ss_dssp EEECSSEEEEEETTEEEEEETTTC
T ss_pred EEeCCCEEEEecCCeEEEEECCCC
Confidence 99999988875 899999999873
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=6.3e-29 Score=248.15 Aligned_cols=218 Identities=18% Similarity=0.308 Sum_probs=170.9
Q ss_pred CcEEEEEcCCCCCCCCccc----------------ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNE----------------WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~----------------~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
+.|++||+.+......... ....+.+|...|.++. +++ .++++|+.|+.|++||+.+++.+
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~~~ 303 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKCL 303 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEEE
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCcEE
Confidence 4799999987753321111 2557788999999884 555 69999999999999999999999
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
..+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|... +..+.+++ .++++| +.|+.|++
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~---~~l~s~---s~dg~v~v 376 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLSD---KFLVSA---AADGSIRG 376 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECS---SEEEEE---ETTSEEEE
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc-EEEEEEcC---CEEEEE---eCCCcEEE
Confidence 999999999999999999999999999999999999999999999999887 88888863 355555 48999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceee
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 372 (494)
||+++..... ...+...+..++|+++++++ ++|+ ||.|++||+++++.+..... .+..+|.+++|+++..+.+
T Consensus 377 wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l-~~~~-dg~i~iwd~~~g~~~~~~~~--~~~~~v~~v~~~~~~l~~~ 449 (464)
T 3v7d_B 377 WDANDYSRKF---SYHHTNLSAITTFYVSDNIL-VSGS-ENQFNIYNLRSGKLVHANIL--KDADQIWSVNFKGKTLVAA 449 (464)
T ss_dssp EETTTCCEEE---EEECTTCCCEEEEEECSSEE-EEEE-TTEEEEEETTTCCEEESCTT--TTCSEEEEEEEETTEEEEE
T ss_pred EECCCCceee---eecCCCCccEEEEEeCCCEE-EEec-CCeEEEEECCCCcEEehhhc--cCCCcEEEEEecCCEEEEE
Confidence 9998755322 23355667778999999988 7776 99999999999987544333 3467899999985543333
Q ss_pred ec-cceeEEEEe
Q psy14130 373 TQ-CEIFRFFKL 383 (494)
Q Consensus 373 ~~-~~~~~~~~l 383 (494)
.+ ++...+|.+
T Consensus 450 ~~~~g~~~i~~l 461 (464)
T 3v7d_B 450 VEKDGQSFLEIL 461 (464)
T ss_dssp EEETTEEEEEEE
T ss_pred EEeCCeEEEEEe
Confidence 33 555544443
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.6e-29 Score=246.09 Aligned_cols=188 Identities=18% Similarity=0.284 Sum_probs=153.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.... .....+.+|...|.+++|+|++ .+|++|+.|+.|++||+.+++.+..+..|...|.+++|+
T Consensus 196 g~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 196 GAIHHHDVRIAN------HQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp SEEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC
T ss_pred CCEEEEecccCc------ceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEEC
Confidence 369999998542 5567888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCC-EEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEE-EecCCCCceEEEEeCCCCCCceeE
Q psy14130 229 RDGS-RLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTT-GFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 229 ~~~~-~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
|++. ++++++ .|+.|++||+++++.+..+..+ .. +..+.|++++..++++ | ..|+.|++||+++.......
T Consensus 269 p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~-v~~~~~s~~~~~l~~~~g---~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 269 PWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ-VTSLIWSPHSKEIMSTHG---FPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC-EEEEEECSSSSEEEEEEC---TTTCEEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc-EEEEEECCCCCeEEEEee---cCCCcEEEEecCCccceeEE
Confidence 9764 666655 7999999999999988888643 44 8999999996666665 4 57999999999875433333
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
....+...|.+++|+|++++| ++++.||.|++||+.+++.+...
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l-~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRIL-STAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEE-EEECTTSEEEEEECCC-------
T ss_pred EecCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccccc
Confidence 334567889999999999999 89999999999999998765443
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-29 Score=267.50 Aligned_cols=207 Identities=13% Similarity=0.130 Sum_probs=162.8
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE----EE--ec-----CCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL----TV--ID-----CHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~----~~--~~-----~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
+.||...+.+++|+|++ ++|+||+.|++|++||+.++... .. +. +|...|++++|+|||++||+|+.|
T Consensus 431 l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp CCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred ccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 45666667777788988 79999999999999999877421 11 22 799999999999999999999999
Q ss_pred CeEEEEeCCCCc---------------------------------------------eEEEeeecCCCCceEEEEECCCC
Q psy14130 241 KTVRVLDPRTGL---------------------------------------------VISQGVCHPGTRSSKAVFIGDTG 275 (494)
Q Consensus 241 ~~v~iwd~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 275 (494)
|+|+|||+.+++ ++..+.+|.+. +..++|+|++
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~-V~svafSpdG- 587 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK-TSAINNSNIG- 587 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS-EEEEEECBTS-
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc-EEEEEecCCc-
Confidence 999999998662 36777889888 9999999995
Q ss_pred eEEEEEecCCCCceEEEEeCCCCCCcee--Eeee--cCCCceEEeEEe-----CCC---CEEEEEEeCCCcEEEEEe---
Q psy14130 276 RIVTTGFSRHSDRQVGLWDENDLNTPLA--LETV--DSSSGVLFPYYD-----HDT---RILFLAGKGDGNIRYYEL--- 340 (494)
Q Consensus 276 ~l~~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~--~~~~~v~~~~~~-----~~~---~~l~~~g~~dg~i~~wd~--- 340 (494)
+|++| +.|++|+|||+++...... ...+ .|...|.+++|+ ||| ++| ++|+.|++|++||+
T Consensus 588 -~lAsg---s~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l-~sgs~D~tv~~wd~~p~ 662 (902)
T 2oaj_A 588 -FVGIA---YAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILM-VCGTDMGEVITYKILPA 662 (902)
T ss_dssp -EEEEE---ETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEE-EEEETTSEEEEEEEEEC
T ss_pred -EEEEE---eCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEE-EEEecCCcEEEEEEecC
Confidence 77777 6999999999876432111 1112 466789999999 886 566 99999999999999
Q ss_pred eCCCceEEecccc--cCCCCeeEEE-Ee----------------------cCCceeeeccceeEEEEeeCC
Q psy14130 341 TNERPYIHFLNQS--LSGAPQRGLG-FM----------------------PKRGCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 341 ~~~~~~~~~~~~~--~~~~~v~~~~-~~----------------------p~~~~~~~~~~~~~~~~l~~~ 386 (494)
.+|+....+.... .+..+|.+++ |+ +++.+++++++.+|+|++.+.
T Consensus 663 ~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~ 733 (902)
T 2oaj_A 663 SGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKS 733 (902)
T ss_dssp GGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTCC
T ss_pred CCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCccc
Confidence 7777654443332 2356788777 66 677788999999999999773
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.5e-29 Score=249.99 Aligned_cols=269 Identities=18% Similarity=0.280 Sum_probs=197.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|.+.|++++|+|+++++|++|+.||.|+ +|+......... ... .
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~-vwd~~~~~~~~~--------~~~--------~----------------- 170 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVL-VFDYTKHPSKPE--------PSG--------E----------------- 170 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEE-EEEGGGSCSSCC--------TTC--------C-----------------
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEE-EEECCCcccccC--------ccc--------c-----------------
Confidence 479999999999994488999999999999 887643211000 000 0
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceE-EEEEeecCCcEEEEEEcCcEEEEEcCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFV-AVVTEVAGGGAFLVLPIHRVKLWYIPDGGL 161 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~ 161 (494)
.. ....+......+..+.++|... .++. ++.+ +.|++|++.++..
T Consensus 171 ------------~~-------------~~~~~~~h~~~v~~l~~~~~~~~~l~s-~~~d--------g~i~vwd~~~~~~ 216 (430)
T 2xyi_A 171 ------------CQ-------------PDLRLRGHQKEGYGLSWNPNLNGYLLS-ASDD--------HTICLWDINATPK 216 (430)
T ss_dssp ------------CC-------------CSEEEECCSSCCCCEEECTTSTTEEEE-ECTT--------SCEEEEETTSCCB
T ss_pred ------------CC-------------CcEEecCCCCCeEEEEeCCCCCCeEEE-EeCC--------CeEEEEeCCCCCC
Confidence 00 0000011112334444544321 1111 1222 4799999988543
Q ss_pred CCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC---eEEEEecCCCCceEEEEEcCCCC-EEEEE
Q psy14130 162 SGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG---EALTVIDCHPDVINCLSFNRDGS-RLVTT 237 (494)
Q Consensus 162 ~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~-~l~s~ 237 (494)
......+...+.+|...|.+++|+|++..+|++++.|+.|++||++++ +.+..+..|...|++++|+|++. +|++|
T Consensus 217 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEE
Confidence 222223456777899999999999965689999999999999999987 57778889999999999999887 78999
Q ss_pred eCCCeEEEEeCCC-CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC------------ceeE
Q psy14130 238 CKDKTVRVLDPRT-GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT------------PLAL 304 (494)
Q Consensus 238 ~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~------------~~~~ 304 (494)
+.||.|++||+++ +..+..+..|... +.++.|+|++..++++| +.|+.|++||++.... ....
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~~~-v~~i~~sp~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHKDE-IFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 372 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCSSC-EEEEEECSSCTTEEEEE---ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCCCC-EEEEEECCCCCCEEEEE---eCCCcEEEEeCCCCccccCccccccCCcceEE
Confidence 9999999999998 4578888889887 99999999977777777 6899999999986332 2222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
....|...|..++|+|++++++++++.||.|++|++...
T Consensus 373 ~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 373 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 233456779999999999955599999999999999764
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=5.1e-29 Score=233.59 Aligned_cols=210 Identities=12% Similarity=0.152 Sum_probs=169.8
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC--CeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEEE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK--GEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVRV 245 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~i 245 (494)
..+.+|...|.+++|+|+| ++||+|+.|++|++||+.. .+.+.++.+|.+.|++++|+++ +++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4577899999999999998 7999999999999999974 3677889999999999999863 899999999999999
Q ss_pred EeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 246 LDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 246 wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
||+++++ .+..+..|... +..++|+|+. +.++++| +.|+.|++||+++...........|...+.+++|+|++
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~g~~l~s~---s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPMLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEcCCCceEEEEEeecCCCc-eeEEEeCcCCCCcEEEEE---ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 9999874 56667788877 9999999972 4566666 59999999999865332222333567889999999973
Q ss_pred -------------CEEEEEEeCCCcEEEEEeeCCCceEEecccc-cCCCCeeEEEEecCC---ceeeec--cceeEEEEe
Q psy14130 323 -------------RILFLAGKGDGNIRYYELTNERPYIHFLNQS-LSGAPQRGLGFMPKR---GCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 323 -------------~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~---~~~~~~--~~~~~~~~l 383 (494)
+.| ++|+.|+.|++||+++++........+ .+...|.+++|+|++ .+++++ |+.+++|++
T Consensus 158 ~~~~~~~~~~~~~~~l-~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp ------------CCEE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccCCCCCCcceE-EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 456 999999999999999876322222111 246789999999984 667664 999999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 237 ~~ 238 (297)
T 2pm7_B 237 DN 238 (297)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=6.4e-28 Score=227.96 Aligned_cols=219 Identities=18% Similarity=0.295 Sum_probs=179.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~ 227 (494)
+.|+||++.++ +.+..+.+|...+.++.+.+ .++++++.++.+++|+.... ..+..+.+|...+..+.|
T Consensus 89 g~v~iw~~~~~-------~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 89 AEVQLWDVQQQ-------KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 158 (318)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CcEEEeecCCc-------eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE
Confidence 37999999998 77888999999998877654 58999999999999998875 466778899999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
++++++|++++.|+.|++||+++++. ......+.+. +..+.+.+.+..++..+ +.+.++.|++||.+....
T Consensus 159 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~-~~~~~~~i~lwd~~~~~~--- 233 (318)
T 4ggc_A 159 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNVLATG-GGTSDRHIRIWNVCSGAC--- 233 (318)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC-EEEEEECTTSTTEEEEE-ECTTTCEEEEEETTTCCE---
T ss_pred cCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc-eEEEEecCCCCcEEEEE-ecCCCCEEEEEecccccc---
Confidence 99999999999999999999998762 3444555555 88899999877766443 126789999999887543
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEE-EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLA-GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRF 380 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~-g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~ 380 (494)
.....+...+..+.|+|+++.++++ |+.|+.|++||+++++++..+. . |..+|++++|+|++.+++++ |+.+|+
T Consensus 234 ~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~-g--H~~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 234 LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-G--HTSRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc-C--CCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 2333466789999999999988543 4479999999999998865543 2 46789999999999998875 999999
Q ss_pred EEeeC
Q psy14130 381 FKLHT 385 (494)
Q Consensus 381 ~~l~~ 385 (494)
|++.+
T Consensus 311 Wd~~~ 315 (318)
T 4ggc_A 311 WRCFE 315 (318)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 99876
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-29 Score=246.26 Aligned_cols=179 Identities=15% Similarity=0.189 Sum_probs=154.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++||+.++ ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 226 ~g~i~~~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 297 (425)
T 1r5m_A 226 KGAIFVYQITEK-------TPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASW 297 (425)
T ss_dssp GGCEEEEETTCS-------SCSEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEE
T ss_pred CCeEEEEEcCCC-------ceeeeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEE
Confidence 347999999987 5667788899999999999998 69999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc------
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP------ 301 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~------ 301 (494)
+|++ ++++++.|+.|++||+++++.+..+..|... +..+.|+|++ .++++| +.|+.|++||+++...+
T Consensus 298 ~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~s~~~-~~l~~~---~~dg~i~i~~~~~~~~~~~~~~~ 371 (425)
T 1r5m_A 298 VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGRISQDG-QKYAVA---FMDGQVNVYDLKKLNSKSRSLYG 371 (425)
T ss_dssp ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEEECTTS-SEEEEE---ETTSCEEEEECHHHHC-------
T ss_pred CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEEEcCCC-CEEEEE---ECCCeEEEEECCCCccceeeeec
Confidence 9999 9999999999999999999999999988887 9999999985 455555 48999999999764410
Q ss_pred -----------eeEeee-cCCC--ceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 302 -----------LALETV-DSSS--GVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 302 -----------~~~~~~-~~~~--~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
.....+ .+.. .|.+++|+|++++| ++++.||.|++||++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 372 NRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI-SVAYSLQEGSVVAIP 424 (425)
T ss_dssp -------CEECCEEEEECCTTCCCCEEEEEECTTSSEE-EEEESSSCCEEEECC
T ss_pred ccccccCcccchhhhhhcCcccCCceEEEEccCCCceE-EEEecCceEEEEeec
Confidence 012222 2333 89999999999988 889999999999985
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.2e-28 Score=243.94 Aligned_cols=208 Identities=20% Similarity=0.298 Sum_probs=168.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE---EEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL---TVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~---~~~~~h~~~v~~l 225 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ ..+++|+.|+.|++||+.+++.. ..+.+|...|.++
T Consensus 193 g~i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 193 STVRVWDVNTG-------EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp SCEEEEESSSC-------CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred CeEEEEECCCC-------cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 37999999988 67788889999999999974 48999999999999999887654 6778999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+| ++++|++|+.|+.|++||+++++.+..+.+|... +..+.+. +.++++| +.|+.|++||+++......+
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~---~~~l~~g---~~dg~i~iwd~~~~~~~~~~- 332 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYR---DRLVVSG---SSDNTIRLWDIECGACLRVL- 332 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEEE---TTEEEEE---ETTSCEEEEETTTCCEEEEE-
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc-EEEEEeC---CCEEEEE---eCCCeEEEEECCCCCEEEEE-
Confidence 99 6889999999999999999999999999999887 8888884 3455666 58999999999986543322
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC---------ceEEecccccCCCCeeEEEEecCCceeee--c
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER---------PYIHFLNQSLSGAPQRGLGFMPKRGCDVT--Q 374 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~---------~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~ 374 (494)
..+...+.+++| ++++| ++|+.||.|++||+.+++ .+.. +. .+..+|.+++| ++..+++ .
T Consensus 333 -~~h~~~v~~~~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~--~h~~~v~~l~~--~~~~l~s~s~ 403 (435)
T 1p22_A 333 -EGHEELVRCIRF--DNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRT-LV--EHSGRVFRLQF--DEFQIVSSSH 403 (435)
T ss_dssp -CCCSSCEEEEEC--CSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEE-EC--CCSSCCCCEEE--CSSCEEECCS
T ss_pred -eCCcCcEEEEEe--cCCEE-EEEeCCCcEEEEECCCCCCccccccchheee-cc--CCCCCeEEEEe--CCCEEEEEeC
Confidence 236678888888 67777 999999999999998765 3222 22 24578999999 4444555 4
Q ss_pred cceeEEEEeeC
Q psy14130 375 CEIFRFFKLHT 385 (494)
Q Consensus 375 ~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 404 Dg~i~iwd~~~ 414 (435)
T 1p22_A 404 DDTILIWDFLN 414 (435)
T ss_dssp SSEEEEEC---
T ss_pred CCEEEEEECCC
Confidence 89999999987
No 78
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-28 Score=240.51 Aligned_cols=227 Identities=13% Similarity=0.113 Sum_probs=164.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC--------CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP--------TAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--------~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
++|+|||+.++.... ...+..+.||.+.|++++|+| ++ ++|||||.|++|+|||+.++.++..+.+|..
T Consensus 111 ~~v~lw~~~~~~~~~--~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~ 187 (393)
T 4gq1_A 111 NTVRLIITKNETIIT--QHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILAGYPLSS 187 (393)
T ss_dssp SCEEEEEEETTEEEE--EEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEEEEECSS
T ss_pred CcEEEEECCCCccce--eeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeeeecCCCC
Confidence 379999998773211 023446789999999999998 55 7999999999999999999888888888999
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEe-------------------------eecCCCCceEEEEECCC
Q psy14130 221 VINCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQG-------------------------VCHPGTRSSKAVFIGDT 274 (494)
Q Consensus 221 ~v~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~ 274 (494)
.|.+++|+|++. +|++++.|++|++||+++++..... .+|... +..+.|.+.+
T Consensus 188 ~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-v~~v~~~~~d 266 (393)
T 4gq1_A 188 PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS-LANVRWIGSD 266 (393)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS-CSEEEEETTT
T ss_pred CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc-ceeeeeecCC
Confidence 999999999874 8999999999999999987643322 234444 7788888555
Q ss_pred CeEEEEEecCCCCceEEEEeCCCCCCceeEe----------------eecCCCceEEeEEe-CCCCEEEEEEeCCCcEEE
Q psy14130 275 GRIVTTGFSRHSDRQVGLWDENDLNTPLALE----------------TVDSSSGVLFPYYD-HDTRILFLAGKGDGNIRY 337 (494)
Q Consensus 275 ~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~v~~~~~~-~~~~~l~~~g~~dg~i~~ 337 (494)
+..++++ +.|+++++||+........+. ............++ +.++.++++|+.||.|++
T Consensus 267 g~~l~s~---s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~l 343 (393)
T 4gq1_A 267 GSGILAM---CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQL 343 (393)
T ss_dssp TCEEEEE---CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEE
T ss_pred CCEEEEE---eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEE
Confidence 6666777 699999999987543322111 11111122223333 445666688999999999
Q ss_pred EEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 338 YELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 338 wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
||+.+++....... +..+|++++|+|+|..++++ ++-+.+|+|..
T Consensus 344 wd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 344 INTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp EETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred EECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 99999887655433 35789999999999998886 67778887754
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=7.2e-29 Score=237.10 Aligned_cols=206 Identities=11% Similarity=0.017 Sum_probs=161.6
Q ss_pred CcEEEEEc-CCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC---------CeEEEEec
Q psy14130 149 HRVKLWYI-PDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK---------GEALTVID 216 (494)
Q Consensus 149 ~~v~iw~~-~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~---------~~~~~~~~ 216 (494)
+.|++||+ .++. ...+.+ |...|.+++|+| + .+|++++.|+.|++||+++ ++++..+.
T Consensus 79 g~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 79 GEILKVDLIGSPS--------FQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred CeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 47999999 7652 267778 999999999999 6 7999999999999999987 66666666
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cc--eEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCceEEE
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GL--VISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~i 292 (494)
|...|.+++|+|++ +++++.|+.|++||+++ +. .......|... +..+.|+| ++ .++++| +.|+.|++
T Consensus 149 -~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-i~~i~~~~~~~-~~l~~~---~~dg~i~i 220 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ-IRDVALLPKEQ-EGYACS---SIDGRVAV 220 (342)
T ss_dssp -SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSC-EEEEEECSGGG-CEEEEE---ETTSEEEE
T ss_pred -eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCc-eeEEEECCCCC-CEEEEE---ecCCcEEE
Confidence 89999999999887 99999999999999998 55 23334455555 89999999 74 455555 48999999
Q ss_pred EeCCCC------CCceeEeeec-------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCe
Q psy14130 293 WDENDL------NTPLALETVD-------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQ 359 (494)
Q Consensus 293 wd~~~~------~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v 359 (494)
||++.. .....+.... +...+.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+ +..+|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~-~~-h~~~v 297 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKKIKNFA-KF-NEDSV 297 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECC-CC-SSSEE
T ss_pred EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEE-EEecCCceEEEEcCccHhHhhhhh-cc-cCCCc
Confidence 999875 3322222211 12389999999999998 899999999999999988654432 21 15789
Q ss_pred eEEEEecCCceeeec--cce
Q psy14130 360 RGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~--~~~ 377 (494)
.+++ |++..++++ |+.
T Consensus 298 ~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 298 VKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEE--ECSSEEEEEEECTH
T ss_pred eEec--CCCCeEEEEecCCc
Confidence 9999 999888775 555
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=266.61 Aligned_cols=209 Identities=17% Similarity=0.205 Sum_probs=170.3
Q ss_pred ecccccccEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEE
Q psy14130 171 DLHGHKRRVGYIEWHPT--AENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVR 244 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~ 244 (494)
.+.+|.+.|.+++|+|+ + ++|++|+.||.|++||+.+++ .+..+.+|...|++++|+|+ +..+++|+.||.|+
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred eccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 45569999999999987 6 799999999999999999987 67788899999999999999 99999999999999
Q ss_pred EEeCCCCc--eEEEeeecCCCCceEEEEECC------------CCeEEEEEecCCCCceEEEEeCCCCCCceeE--eeec
Q psy14130 245 VLDPRTGL--VISQGVCHPGTRSSKAVFIGD------------TGRIVTTGFSRHSDRQVGLWDENDLNTPLAL--ETVD 308 (494)
Q Consensus 245 iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~ 308 (494)
+||++++. ....+..|... +..+.|+|. ++.++++| +.||.|++||+++....... ....
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~-v~~l~~~p~~~~~~~~~~~~~d~~~l~sg---s~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTG---GADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSC-EEEEEECCCC---------CGGGCCEEEE---ETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred EEEeecCCCcceeEeecCCCc-eEEEEecCcccccccccccCCCCCEEEEE---ECCCeEEEEeccCCcccceeeeeecC
Confidence 99999874 44556778777 999999994 24555555 58999999999876543221 2234
Q ss_pred CCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCce--EEecccccCCCCeeEEEEecCCceeeec--cceeEEE
Q psy14130 309 SSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPY--IHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFF 381 (494)
Q Consensus 309 ~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~ 381 (494)
|...|.+++|+|+ ++++ ++|+.||.|++||+.+++.. ........+...|.+++|+|++..++++ |+.+++|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l-~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEE-EEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCcEEEEEeccCCCCCCEE-EEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 6688999999999 6776 99999999999999987421 1122233356789999999999988874 8999999
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
++..
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9985
No 81
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.4e-29 Score=244.44 Aligned_cols=192 Identities=12% Similarity=-0.002 Sum_probs=152.8
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-----ceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD-----VINCLSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
+|...|.+++|+|+| ..||+++.||.|++||.+. .+..+. |.. .|.+++|+|||++|++|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 468899999999999 7999999999999999643 666777 665 4999999999999999999999999999
Q ss_pred CCCce-------EEEe----eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee--cCCCceEE
Q psy14130 249 RTGLV-------ISQG----VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV--DSSSGVLF 315 (494)
Q Consensus 249 ~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~ 315 (494)
.++.. +.++ .+|... +.+++|+|++ +++++ .|+.|++||+.+.........+ .|...|.+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~-V~sVawSPdg--Laass----~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDW-VTHIVWYEDV--LVAAL----SNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCC-EEEEEEETTE--EEEEE----TTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred CCCccccccceeeeeeeccccccccc-EEEEEEcCCc--EEEEe----CCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 98863 5666 455555 9999999985 66665 8999999999875532111112 35578999
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE--ecCCceeeec--cceeEEEEee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF--MPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~~~~--~~~~~~~~l~ 384 (494)
++|+ ++.| ++++ ++.|++||+.+++...... .+...+.+++| +|++..++++ ++. |+|.++
T Consensus 232 vaFs--g~~L-ASa~-~~tIkLWd~~~~~~~~~~~---gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV--DYKV-VLTC-PGYVHKIDLKNYSISSLKT---GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE--TTEE-EEEC-SSEEEEEETTTTEEEEEEC---SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE--CCEE-EEEe-CCeEEEEECCCCeEEEEEc---CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9999 5777 6665 7999999999877522222 35788999999 9999887775 666 899875
No 82
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=9e-29 Score=243.60 Aligned_cols=220 Identities=15% Similarity=0.177 Sum_probs=179.7
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|++||+.++ .....+.+|...|.+++|+|++ .+|++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 118 dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 189 (420)
T 3vl1_A 118 EGDIKVLDSNFN-------LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAI 189 (420)
T ss_dssp TSCEEEECTTSC-------EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEE
T ss_pred CCCEEEEeCCCc-------ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEE
Confidence 347999999877 6677788999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC---CCCceEE---------------------EEECCCCeEEEEEec
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP---GTRSSKA---------------------VFIGDTGRIVTTGFS 283 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~~~---------------------~~~~~~~~l~~~g~~ 283 (494)
+|++++|++++.|+.|++||+++++.+..+..|. .. +..+ .|+|+ +.++++|
T Consensus 190 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~-- 265 (420)
T 3vl1_A 190 IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG-VNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAG-- 265 (420)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC-EEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEE--
T ss_pred cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC-ccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEE--
Confidence 9999999999999999999999999888887542 22 3444 44566 5666666
Q ss_pred CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCc-eEEecccccCCCCeeE
Q psy14130 284 RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERP-YIHFLNQSLSGAPQRG 361 (494)
Q Consensus 284 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~v~~ 361 (494)
+.|+.|++||+++....... ...+...+.+++|+|+++ +| ++|+.||.|++||+++++. +..+... +..++.+
T Consensus 266 -~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~ 340 (420)
T 3vl1_A 266 -HVSGVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYI-YAGYENGMLAQWDLRSPECPVGEFLIN--EGTPINN 340 (420)
T ss_dssp -ETTSCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEE-EEEETTSEEEEEETTCTTSCSEEEEES--TTSCEEE
T ss_pred -cCCCeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEE-EEEeCCCeEEEEEcCCCcCchhhhhcc--CCCCceE
Confidence 58999999999876543332 234567899999999999 55 9999999999999998754 3333222 3567888
Q ss_pred EEEecCCceeeec--cceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+.|. ++.+++++ |+.+++|++..
T Consensus 341 ~~~~-~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 341 VYFA-AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEE-TTEEEEEETTTEEEEEEEECC
T ss_pred EEeC-CCCEEEEecCCccEEEEeccC
Confidence 8665 56666664 89999999987
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.8e-28 Score=257.31 Aligned_cols=224 Identities=16% Similarity=0.224 Sum_probs=184.6
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+++|+||++.+.... .......+.+|...|.+++|+|++ ++|++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 404 D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 404 DKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp TSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 457999999865321 113456788999999999999998 79999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEe---eecCCCCceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQG---VCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|++++|++++.|++|++||+......... .+|... +.++.|+|++. .++++| +.|+.|++||+++.....
T Consensus 481 s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~---s~d~~v~vwd~~~~~~~~- 555 (694)
T 3dm0_A 481 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDW-VSCVRFSPNTLQPTIVSA---SWDKTVKVWNLSNCKLRS- 555 (694)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSC-EEEEEECSCSSSCEEEEE---ETTSCEEEEETTTCCEEE-
T ss_pred eCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCc-EEEEEEeCCCCcceEEEE---eCCCeEEEEECCCCcEEE-
Confidence 999999999999999999998755433222 356666 89999999853 456666 599999999998754322
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEE
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFK 382 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~ 382 (494)
....|...|.+++|+|++++| ++|+.||.|++||+++++.+.. +.....+.+++|+|++.+++++ ++.+++|+
T Consensus 556 -~~~~h~~~v~~v~~spdg~~l-~sg~~Dg~i~iwd~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 556 -TLAGHTGYVSTVAVSPDGSLC-ASGGKDGVVLLWDLAEGKKLYS----LEANSVIHALCFSPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp -EECCCSSCEEEEEECTTSSEE-EEEETTSBCEEEETTTTEEEEC----CBCSSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred -EEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCceEEE----ecCCCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence 223467889999999999998 9999999999999999876432 2335679999999999887775 78899999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 630 ~~~ 632 (694)
T 3dm0_A 630 LES 632 (694)
T ss_dssp TTT
T ss_pred CCC
Confidence 987
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.8e-28 Score=239.52 Aligned_cols=186 Identities=12% Similarity=0.139 Sum_probs=152.6
Q ss_pred CcEEEEEcCC------CCCCCCcccceEec-------ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 149 HRVKLWYIPD------GGLSGNLNEWIMDL-------HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 149 ~~v~iw~~~~------~~~~~~~~~~~~~~-------~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+.|++||+.+ +.... ..+...+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTC--CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CcEEEEeCCccccccccceee--ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEE
Confidence 4799999988 53221 0111245 4489999999999997 9999999999999999999999999
Q ss_pred cC---C---CCceEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceEEEeee-------------cCCCCceEEEEECC
Q psy14130 216 DC---H---PDVINCLSFNRDGSRLVTTCKD---KTVRVLDPRTGLVISQGVC-------------HPGTRSSKAVFIGD 273 (494)
Q Consensus 216 ~~---h---~~~v~~l~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 273 (494)
.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+.. |... +..+.|+|+
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 302 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDS 302 (397)
T ss_dssp ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSS
T ss_pred eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-EEEEEECCC
Confidence 98 9 9999999999999999999999 9999999999999999988 8877 999999998
Q ss_pred CCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----cC---------------CCceEEeEEeCCC----------CE
Q psy14130 274 TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV----DS---------------SSGVLFPYYDHDT----------RI 324 (494)
Q Consensus 274 ~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~---------------~~~v~~~~~~~~~----------~~ 324 (494)
+. ++++| +.|+.|++||+++......+... .+ ...|.+++|+|++ ++
T Consensus 303 ~~-~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 378 (397)
T 1sq9_A 303 GE-TLCSA---GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES 378 (397)
T ss_dssp SS-EEEEE---ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCE
T ss_pred CC-EEEEE---eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccce
Confidence 55 55555 48999999999876543333200 24 6789999999998 56
Q ss_pred EEEEEeCCCcEEEEEeeCCC
Q psy14130 325 LFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~ 344 (494)
| ++|+.||.|++||+.+++
T Consensus 379 l-~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 379 L-CCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp E-EEEETTTEEEEEEEEC--
T ss_pred E-EEecCCCcEEEEEcCCCC
Confidence 6 999999999999998864
No 85
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=6.3e-28 Score=249.40 Aligned_cols=329 Identities=12% Similarity=0.075 Sum_probs=213.5
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecc----cccccccCcccccccccceeecCC--ceEEEEEEEecC
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSK----RDGCYDNVPITRNAHDSHFCAANP--KFVAVVTEVAGG 76 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 76 (494)
.+|.+.|++++|+| ++++|++++ |+.|+ +|+.... +. ...+...... .-..++.++ +...++. ...+
T Consensus 15 ~~~~~~v~~~~~sp-dg~~l~~~~-~~~v~-v~~~~~~~~~~~~--~~~~~~h~~~-~v~~~~~sp~~~~~~l~s-~~~d 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDP-TTNAIAYPC-GKSAF-VRCLDDGDSKVPP--VVQFTGHGSS-VVTTVKFSPIKGSQYLCS-GDES 87 (615)
T ss_dssp CCCTTCCCCCEEET-TTTEEEEEE-TTEEE-EEECCSSCCSSCS--EEEECTTTTS-CEEEEEECSSTTCCEEEE-EETT
T ss_pred CCccCceeEEEECC-CCCEEEEec-CCeEE-EEECCCCCCcccc--ceEEecCCCc-eEEEEEECcCCCCCEEEE-ecCC
Confidence 68999999999999 899999999 88998 8887643 21 1111110000 011122333 2222222 2234
Q ss_pred ceEEEEeccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEc-----CcE
Q psy14130 77 GAFLVLPIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPI-----HRV 151 (494)
Q Consensus 77 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~v 151 (494)
|.+.++.+........ . .......+ .........+.++|+ +..+++... +.|
T Consensus 88 g~v~vw~~~~~~~~~~--~---------~~~~~~~~--~~~~~~v~~~~~s~~----------~~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNS--V---------EVNVKSEF--QVLAGPISDISWDFE----------GRRLCVVGEGRDNFGVF 144 (615)
T ss_dssp SEEEEEEEEEEGGGTE--E---------EEEEEEEE--ECCSSCEEEEEECTT----------SSEEEEEECCSSCSEEE
T ss_pred CEEEEEeCCCCccccc--c---------cccccchh--hcccccEEEEEEeCC----------CCEEEEeccCCCCccEE
Confidence 4444444321000000 0 00000000 011122223333332 222333222 257
Q ss_pred EEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC---ceEEEEEc
Q psy14130 152 KLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD---VINCLSFN 228 (494)
Q Consensus 152 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~---~v~~l~~~ 228 (494)
.+|| .+ ..+..+.+|...|.+++|+|++..++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+
T Consensus 145 ~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 145 ISWD--SG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp EETT--TC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred EEEE--CC-------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 7777 44 566788899999999999999855899999999999999999999999999999 99999999
Q ss_pred CC-CCEEEEEeCCCeEEEEeCCCCceEEEe-e---ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 229 RD-GSRLVTTCKDKTVRVLDPRTGLVISQG-V---CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 229 ~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+ +++|++++.|+.|++||+++++.+..+ . .|... +..+.|+ + +.+++++ +.|+.|++||+++......
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~-~~~l~~~---~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG-IFALSWL-D-SQKFATV---GADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC-EEEEEES-S-SSEEEEE---ETTSEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc-eEEEEEc-C-CCEEEEE---cCCCcEEEEECCCCcEEEE
Confidence 99 999999999999999999999999888 5 78777 8999999 6 4555555 4899999999987544332
Q ss_pred Eeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 304 LETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 304 ~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
+.... ....+..+.|. +++.+ ++|+.||.|++||+.+++++..+. . +..+|.+++| |+ ....+.|+.+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~l-~~~~~~g~i~~~d~~~~~~~~~~~-~--~~~~v~~~~~-~~-l~~~~~dg~i~~w 362 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVAT-GNGRI-ISLSLDGTLNFYELGHDEVLKTIS-G--HNKGITALTV-NP-LISGSYDGRIMEW 362 (615)
T ss_dssp EECCTTCGGGCEEEEEEE-ETTEE-EEEETTSCEEEEETTEEEEEEEEC-C--CSSCEEEEET-TT-TEEEETTSCEEET
T ss_pred EcCCCCcccCceeEEEeC-CCCeE-EEEECCCCEEEEECCCCcEEEEEe-C--CCCCEEEEEe-cC-cEEECCCCeEEEE
Confidence 22110 12556777775 88888 889999999999999876644332 2 3455666666 65 2222235555555
Q ss_pred Ee
Q psy14130 382 KL 383 (494)
Q Consensus 382 ~l 383 (494)
++
T Consensus 363 ~~ 364 (615)
T 1pgu_A 363 SS 364 (615)
T ss_dssp TT
T ss_pred Ec
Confidence 43
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.6e-28 Score=239.49 Aligned_cols=183 Identities=19% Similarity=0.300 Sum_probs=152.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~~l 225 (494)
.+++||..... ..+..+.+|...+.++.|+|++ .++++++.|+.+++||..+++ .+.....|...|.++
T Consensus 210 ~i~~~d~~~~~------~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~ 282 (420)
T 4gga_A 210 HIHHHDVRVAE------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 282 (420)
T ss_dssp EEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEE
T ss_pred ceeEeeecccc------eeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeee
Confidence 69999987653 4567788999999999999998 799999999999999998765 356677899999999
Q ss_pred EEcCCCC-EEEEE--eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 226 SFNRDGS-RLVTT--CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 226 ~~~~~~~-~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+|+|++. +++++ +.|++|++||+++++++..+..|.. +..+.|.+++..+++++. ..|+.|+|||+++.....
T Consensus 283 ~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~--v~~~~~~~~~~~lv~~sg--~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 283 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHG--FAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC--EEEEEEETTTTEEEEEEC--TTTCCEEEEETTTCCEEE
T ss_pred eeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc--eeeeeecCCCCeEEEEEe--cCCCEEEEEECCCCcEEE
Confidence 9999654 55554 4799999999999999888887654 789999999888776641 478999999998865433
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.+ ..|...|.+++|+|||++| ++|+.|++|++||+....+.
T Consensus 359 ~l--~gH~~~V~~l~~spdg~~l-~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 359 EL--KGHTSRVLSLTMSPDGATV-ASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EE--CCCSSCEEEEEECTTSSCE-EEEETTTEEEEECCSCSSCC
T ss_pred EE--cCCCCCEEEEEEcCCCCEE-EEEecCCeEEEEECCCCCcc
Confidence 33 2467899999999999999 99999999999999876553
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9.2e-29 Score=240.56 Aligned_cols=182 Identities=21% Similarity=0.293 Sum_probs=140.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~ 224 (494)
+.|++||+. + +++..+.+|...|.+++|+|++..+|++|+.|+.|++||+++ +..+..+ +|...|.+
T Consensus 185 ~~i~i~d~~-~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~ 255 (383)
T 3ei3_B 185 GRLLLLGLD-G-------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNA 255 (383)
T ss_dssp SEEEEEETT-S-------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEE
T ss_pred CCEEEEECC-C-------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEE
Confidence 479999984 4 567788899999999999999844999999999999999987 6666666 59999999
Q ss_pred EEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----CceEEEEECCCCeEEEEEe------cCCCCceEEE
Q psy14130 225 LSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----RSSKAVFIGDTGRIVTTGF------SRHSDRQVGL 292 (494)
Q Consensus 225 l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~------~~~~d~~i~i 292 (494)
++|+| ++++|++++.|+.|++||+++++....+..|... ....+.|+|+ +.++++++ +.+.|+.|++
T Consensus 256 ~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~s~dg~~s~s~d~~i~i 334 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPM-YDLIVAGRYPDDQLLLNDKRTIDI 334 (383)
T ss_dssp EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSS-SSEEEEECBCCTTTCTTCCCCEEE
T ss_pred EEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCC-CCceEEEecCCcccccCCCCeEEE
Confidence 99999 9999999999999999999999877777765421 0122345444 22333222 1158999999
Q ss_pred EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 293 WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
||+++......+....+...+..++|+|++++| ++|+ ||.|++||+++
T Consensus 335 wd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l-~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 335 YDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL-ASGM-GFNILIWNRED 382 (383)
T ss_dssp EETTTCCEEEEECBTTBCSCCCEEEECTTSSEE-EEEE-TTEEEEEECC-
T ss_pred EecCCCceeeeecCCCCCceEEEEEEecCccEE-EEec-CCcEEEEecCC
Confidence 999886553333322234556667999999998 7776 99999999875
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=5.8e-28 Score=238.71 Aligned_cols=229 Identities=16% Similarity=0.240 Sum_probs=184.5
Q ss_pred cEEEEEcCCCCCCC---CcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-------EEEecCCC
Q psy14130 150 RVKLWYIPDGGLSG---NLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-------LTVIDCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-------~~~~~~h~ 219 (494)
.|++|++.+..... ....++..+.+|...|.+++|+|++..+|++|+.||.|++||+.++.. ...+.+|.
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~ 231 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC
Confidence 69999997621110 001566788899999999999999855999999999999999987421 45677899
Q ss_pred CceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 220 DVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 220 ~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
..|.+++|+| ++.+|++++.|+.|++||++++ +.+..+..|... +.+++|+|++..++++| +.|+.|++||+
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-v~~i~~~p~~~~~l~tg---~~dg~v~vwd~ 307 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE-VNCLSFNPYSEFILATG---SADKTVALWDL 307 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC-EEEEEECSSCTTEEEEE---ETTSEEEEEET
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC-eEEEEeCCCCCCEEEEE---eCCCeEEEEeC
Confidence 9999999999 7889999999999999999987 567777888877 99999999977788888 69999999999
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC-------------ceEEecccccCCCCeeEE
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER-------------PYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~-------------~~~~~~~~~~~~~~v~~~ 362 (494)
++...+.... ..|...|.+++|+|+++.++++++.||.|++||+.... .+... ...+...|+++
T Consensus 308 ~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~ 384 (430)
T 2xyi_A 308 RNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTAKISDF 384 (430)
T ss_dssp TCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE--CCCCSSCEEEE
T ss_pred CCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE--cCCCCCCceEE
Confidence 9855443332 24678899999999998776999999999999998732 11111 12345679999
Q ss_pred EEecCCc-eeeec--cceeEEEEeeC
Q psy14130 363 GFMPKRG-CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~-~~~~~--~~~~~~~~l~~ 385 (494)
+|+|++. +++++ |+.+++|++..
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EECCCCCCEEEEEECCCCEEEeEccc
Confidence 9999998 66553 89999999876
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=4.3e-28 Score=233.80 Aligned_cols=218 Identities=13% Similarity=0.130 Sum_probs=160.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEE--cCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEW--HPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
+.|++||+.++ +.. .+.+|...|.+++| +|++ .+|++++.|+.|++||+++++.+..+..+. .+.++.
T Consensus 108 g~v~iwd~~~~-------~~~-~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~ 177 (368)
T 3mmy_A 108 KTAKMWDLSSN-------QAI-QIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCAD 177 (368)
T ss_dssp SEEEEEETTTT-------EEE-EEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEE
T ss_pred CcEEEEEcCCC-------Cce-eeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEE
Confidence 36999999887 333 35679999999999 8887 799999999999999999999888888664 666777
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCC---eEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTG---RIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+. +..+++++.++.+++||++....... ...........+.+.+... ..+++| +.|+.|++||++......
T Consensus 178 ~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~i~~~~~~~~~~ 252 (368)
T 3mmy_A 178 VI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG---SIEGRVAIHYINPPNPAK 252 (368)
T ss_dssp EE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE---ETTSEEEEEESSCSCHHH
T ss_pred ec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe---cCCCcEEEEecCCCCccc
Confidence 76 45889999999999999987763332 2222222244555554422 225555 589999999998753211
Q ss_pred eEeeecCC-C------------ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 303 ALETVDSS-S------------GVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 303 ~~~~~~~~-~------------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
....+..+ . .+.+++|+|++++| ++|+.||.|++||+.+++.+..+. .+..+|.+++|+|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~g~ 328 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDARTKLKTSE---QLDQPISACCFNHNGN 328 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEEEECC---CCSSCEEEEEECTTSS
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCCCcEEEEec---CCCCCceEEEECCCCC
Confidence 11122222 2 69999999999998 899999999999999987754432 2367899999999999
Q ss_pred eeeec--cceeEEEEeeC
Q psy14130 370 CDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l~~ 385 (494)
+++++ |+..+.|++..
T Consensus 329 ~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 329 IFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp CEEEEECCCSTTCGGGCC
T ss_pred eEEEEecccccccccccC
Confidence 88875 55555555443
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.4e-28 Score=232.92 Aligned_cols=214 Identities=10% Similarity=-0.010 Sum_probs=157.3
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcC--CCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHP--TAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p--~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l 225 (494)
.+.+|++.++ +.+..+ .+|...|.+++|+| ++ .+|++|+.|++|++||+++++.+.... .|...|+++
T Consensus 105 ~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 105 QITILDSKTN-------KVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG 176 (343)
T ss_dssp EEEEEETTTC-------CEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE
T ss_pred ceEEeecCCc-------ceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE
Confidence 3455565555 323333 36778999999999 87 799999999999999999998877664 456689999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceE-EEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVI-SQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|+|.+|++|+.|+.|++||+++++.+ ..+.. |... +..+.|+|++ .++++| + ++.|++||+++......
T Consensus 177 ~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~fs~~g-~~l~s~---~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 177 VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK-IKEVKFADNG-YWMVVE---C-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC-EEEEEECTTS-SEEEEE---E-SSBEEEEETTSSTTCBS
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC-EEEEEEeCCC-CEEEEE---e-CCeEEEEEcCCCCccee
Confidence 99999999999999999999999999977 78887 8877 9999999984 555555 3 55999999998665433
Q ss_pred Eeeec-CCCce--EEeEEeCCCCEEEEEEeC-CCcEEEEEeeCCCceEEecccccCCCCeeEEEEec---CCceeee--c
Q psy14130 304 LETVD-SSSGV--LFPYYDHDTRILFLAGKG-DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP---KRGCDVT--Q 374 (494)
Q Consensus 304 ~~~~~-~~~~v--~~~~~~~~~~~l~~~g~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~~~--~ 374 (494)
+..+. +...+ .+++|+|++++| ++++. |+.|++|++......... .++..++|.| +...+++ .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~~l-~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGKNM-IAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSSEE-EEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEE
T ss_pred ecccccccccccceEEEECCCCCEE-EEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEec
Confidence 32211 11222 469999999999 66666 999999999776543222 4567778887 5554443 4
Q ss_pred cceeEEEEeeC
Q psy14130 375 CEIFRFFKLHT 385 (494)
Q Consensus 375 ~~~~~~~~l~~ 385 (494)
++.++++-...
T Consensus 323 d~~~~~~~~~~ 333 (343)
T 3lrv_A 323 DGGIAAILKTN 333 (343)
T ss_dssp TTEEEEEEECS
T ss_pred CCceEEEEecC
Confidence 77777765443
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=3.3e-28 Score=233.77 Aligned_cols=184 Identities=17% Similarity=0.139 Sum_probs=147.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc----cEEEEE----EcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR----RVGYIE----WHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~~~~----~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
+.|++||+.++. .+...+..|.. .|.+++ |+|++ .+|++++.|+.|++||+++++.... ..|..
T Consensus 139 ~~i~vwd~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~ 210 (357)
T 3i2n_A 139 GTVKVWDPRQKD------DPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRWE-TNIKN 210 (357)
T ss_dssp SCEEEECTTSCS------SCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEEE-EECSS
T ss_pred CeEEEEeCCCCC------CcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceeee-cCCCC
Confidence 379999998873 14455544444 899998 78887 7999999999999999999887554 45899
Q ss_pred ceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 221 VINCLSFNR---DGSRLVTTCKDKTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 221 ~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.|.+++|+| ++.+|++++.|+.|++||+++++.+..+. .|... +..+.|+|++..++++| +.|+.|++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~---~~dg~i~i 286 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTA---GGAGGLHL 286 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC-EEEEEEETTEEEEEEEE---ETTSEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCC-EEEEEECCCCCcEEEEE---eCCCcEEE
Confidence 999999999 99999999999999999999877554443 78877 99999999966577777 69999999
Q ss_pred EeCCCCCCc-----------------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 293 WDENDLNTP-----------------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 293 wd~~~~~~~-----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
||++..... .......+...|.+++|+|++++|+++|+.||.|++||+.+.+
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 998864433 1122234667899999999999995589999999999998754
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-28 Score=245.90 Aligned_cols=226 Identities=10% Similarity=0.045 Sum_probs=177.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCC-----CCEEEEEeCCCeEEEEECCCCeE-----------
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTA-----ENVVASAGFDYLIILWDVGKGEA----------- 211 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~s~d~~v~iwd~~~~~~----------- 211 (494)
+++|+||++.++.... .....+.+|.+.|.+++|+|++ ..+||+|+.||+|++||+.++..
T Consensus 182 D~tI~iWd~~~~~~~~---~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHC---VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp CEEEEEEEEETTTCCE---EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CceEEEEEccCCCCCc---eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 4579999998764210 1124466788999999999971 26999999999999999976632
Q ss_pred EEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eEEEeeecCCCCceEE--EEECCCCeEEEEEecCCCCc
Q psy14130 212 LTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL-VISQGVCHPGTRSSKA--VFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 212 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~~d~ 288 (494)
...+.+|...|++++|++++ .|++|+.||+|++||++++. +...+.+|... +.++ .|.+++..++++| +.|+
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~-V~sv~~~~s~~g~~~laS~---S~D~ 333 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSY-ILSVSTAYSDFEDTVVSTV---AVDG 333 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSC-EEEEEEECCTTSCCEEEEE---ETTS
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeeccccc-EEEEEEEcCCCCCeEEEEe---ccCC
Confidence 34678899999999999864 89999999999999999774 45668889887 8888 3455533777777 7999
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+|+|||+++......+........+.+++|+|+++.+ ++++.|++|++||++++.....+. .+..+|.+++|+|++
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l-~s~~~d~tv~lwd~~~~~~~~~l~---gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY-IYSDGASSLRAVPSRAAFAVHPLV---SRETTITAIGVSRLH 409 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE-EEECSSSEEEEEETTCTTCCEEEE---ECSSCEEEEECCSSC
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeE-EEeCCCCcEEEEECcccccceeee---cCCCceEEEEeCCCC
Confidence 9999999875543333322222347889999999987 889999999999999987654433 246789999999999
Q ss_pred ceeeec--cceeEEEEeeC
Q psy14130 369 GCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~--~~~~~~~~l~~ 385 (494)
..++++ |+.+++|++..
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CBCEEEETTTEEECCBSCS
T ss_pred CeEEEEECCCEEEEEechH
Confidence 988875 99999999755
No 93
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.4e-27 Score=229.67 Aligned_cols=214 Identities=11% Similarity=0.055 Sum_probs=158.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC-eEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG-EALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~h~~~v~~l~~~ 228 (494)
+|+|||+.++ +.+..+. |...|.+++|+++. ++.+. |+.|++||+.++ +.+..+.. ....++++
T Consensus 82 ~v~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~~---~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s 146 (355)
T 3vu4_A 82 VVHIWDDVKK-------QDVSRIK-VDAPVKDLFLSREF---IVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFS 146 (355)
T ss_dssp EEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSE---EEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEE
T ss_pred EEEEEECCCC-------cEEEEEE-CCCceEEEEEcCCE---EEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEE
Confidence 7999999988 5666665 67799999999863 33343 789999999988 66555553 44456677
Q ss_pred CCCCEEEE--EeCCCeEEEEeCCCCc----------------eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce-
Q psy14130 229 RDGSRLVT--TCKDKTVRVLDPRTGL----------------VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ- 289 (494)
Q Consensus 229 ~~~~~l~s--~~~d~~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~- 289 (494)
+ .+++. |+.||.|++||+++++ .+..+.+|... +.+++|+|+ +.++++| +.|++
T Consensus 147 ~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-v~~~~~s~~-g~~l~s~---s~d~~~ 219 (355)
T 3vu4_A 147 N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-IKMVRLNRK-SDMVATC---SQDGTI 219 (355)
T ss_dssp T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC-EEEEEECTT-SSEEEEE---ETTCSE
T ss_pred c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc-eEEEEECCC-CCEEEEE---eCCCCE
Confidence 6 56666 5789999999999865 26788899988 999999998 5566666 59998
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce-EEeccc----------------
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY-IHFLNQ---------------- 352 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~-~~~~~~---------------- 352 (494)
|++||+++......+....|...|.+++|+|++++| ++|+.|+.|++||++.+... ...+..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF 298 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence 999999986543333211267889999999999998 89999999999999865321 011100
Q ss_pred ---ccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 353 ---SLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 353 ---~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
.....+...++|+|++..++.+ |+.+++|++...
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0011234679999999887775 899999998763
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-27 Score=236.60 Aligned_cols=224 Identities=9% Similarity=-0.001 Sum_probs=172.6
Q ss_pred cCcEEEEEcC--CCCCCCCcccceEecc--cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE----EecCCC
Q psy14130 148 IHRVKLWYIP--DGGLSGNLNEWIMDLH--GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT----VIDCHP 219 (494)
Q Consensus 148 ~~~v~iw~~~--~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~----~~~~h~ 219 (494)
++.|+|||+. ++ ..+..+. .|...|.+++|+|++ .+|++|+.|+.|++|++.+++... .+.+|.
T Consensus 124 dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~ 195 (450)
T 2vdu_B 124 DKSLLVFDVDKTSK-------NVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV 195 (450)
T ss_dssp GTEEEEEEECSSSS-------SCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS
T ss_pred CCeEEEEECcCCCC-------ceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCcccccccceeeeccc
Confidence 3579999998 66 4455554 577899999999998 799999999999999998876543 677899
Q ss_pred CceEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 220 DVINCLSFNRD---GSRLVTTCKDKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 220 ~~v~~l~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
..|++++|+|+ +++|++++.|+.|++||+++++.+.. +.+|... +..++|+ + +.++++| +.|+.|++||+
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d-~~~l~s~---~~d~~v~vwd~ 269 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-K-DYLLLSA---GGDDKIFAWDW 269 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-S-TTEEEEE---ESSSEEEEEET
T ss_pred CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEEEC-C-CCEEEEE---eCCCeEEEEEC
Confidence 99999999999 99999999999999999999998877 5578877 9999999 6 5555555 58999999999
Q ss_pred CCCCCceeEeee-----------------------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEe--eCCCceEEec
Q psy14130 296 NDLNTPLALETV-----------------------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYEL--TNERPYIHFL 350 (494)
Q Consensus 296 ~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~--~~~~~~~~~~ 350 (494)
++......+... .....+..++|+|++++|++++..|+.|++|++ ..+.. ...+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~-l~~~ 348 (450)
T 2vdu_B 270 KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGD-LALK 348 (450)
T ss_dssp TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTC-EEEE
T ss_pred CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCc-eeec
Confidence 986543333211 123468899999999999444448999999999 55422 1222
Q ss_pred ccccCCCCeeEEEEecCCceeeec--------cceeEEEEeeCC
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQ--------CEIFRFFKLHTT 386 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~--------~~~~~~~~l~~~ 386 (494)
..+.....+.+++|+|++.+++.+ +..+++|.+...
T Consensus 349 ~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 349 QIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred cEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 233334789999999975544443 234799998763
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.2e-28 Score=237.49 Aligned_cols=179 Identities=17% Similarity=0.312 Sum_probs=146.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEec---ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe----------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL---HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---------- 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~---~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---------- 215 (494)
+.|++||+.++ +.+..+ .+|...|.+++|+|++ .+|++++.|+.|++||+++++.+..+
T Consensus 138 g~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 138 HALRLWNIQTD-------TLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp SCEEEEETTTT-------EEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGG
T ss_pred CeEEEEEeecC-------eEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCC
Confidence 47999999987 555555 7899999999999998 79999999999999999876544333
Q ss_pred ------------------cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------EEEeeecCCC
Q psy14130 216 ------------------DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--------------ISQGVCHPGT 263 (494)
Q Consensus 216 ------------------~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--------------~~~~~~~~~~ 263 (494)
.+|...|.+++|+ +++|++++.|+.|++||+++++. +..+..|...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD 287 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC
T ss_pred CcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc
Confidence 3499999999998 77999999999999999988744 7778888877
Q ss_pred CceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCce-eEeee-cC--CCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 264 RSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPL-ALETV-DS--SSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 264 ~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~-~~--~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
+..+.|+|+. +.++++| +.|+.|++||+++..... ....+ .+ ...|.+++|+|++++| ++|+.||.|++|
T Consensus 288 -v~~~~~s~~~~~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw 362 (366)
T 3k26_A 288 -IWYMRFSMDFWQKMLALG---NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-IAVCDDASIWRW 362 (366)
T ss_dssp -SSCCCCEECTTSSEEEEE---CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-EEEETTSEEEEE
T ss_pred -EEEEEEcCCCCCcEEEEE---ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-EEEeCCCEEEEE
Confidence 8899999882 4566666 699999999998765322 11122 22 5889999999999998 899999999999
Q ss_pred EeeC
Q psy14130 339 ELTN 342 (494)
Q Consensus 339 d~~~ 342 (494)
|+.+
T Consensus 363 d~~~ 366 (366)
T 3k26_A 363 DRLR 366 (366)
T ss_dssp EC--
T ss_pred EecC
Confidence 9853
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.3e-28 Score=238.76 Aligned_cols=225 Identities=12% Similarity=0.081 Sum_probs=171.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE---ALTVIDCHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~l 225 (494)
+.|+|||+.++.. .....+.+|...|.+++|+|++ ++|++++.|++|++||+.+++ ....+.+|...|.++
T Consensus 33 ~~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 33 NQVELYEQDGNGW-----KHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp SCBCEEEEETTEE-----EECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred CEEEEEEccCCce-----EEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 3799999987621 3455778999999999999998 799999999999999999877 677788899999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCc---eEEEeee-cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGL---VISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT- 300 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~- 300 (494)
+|+|++++|++++.|+.|++||+++++ ....+.. |... +..++|+|++ .++++| +.|+.|++||++....
T Consensus 107 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~-~~l~~~---~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST-ILSLDWHPNN-VLLAAG---CADRKAYVLSAYVRDVD 181 (377)
T ss_dssp ECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC-EEEEEECTTS-SEEEEE---ESSSCEEEEEECCSSCC
T ss_pred EECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC-eEEEEEcCCC-CEEEEE---eCCCEEEEEEEEecccC
Confidence 999999999999999999999999887 4677777 7777 9999999985 555555 5899999999863220
Q ss_pred --------------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEe
Q psy14130 301 --------------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFM 365 (494)
Q Consensus 301 --------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~ 365 (494)
......+.+...|.+++|+|++++| ++|+.||.|++||+.+++.....+.. ..+..+|.+++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-AYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE-EEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred CCccccccccccchhhhhhcccCCceEEEEEECCCCCEE-EEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 1112222577889999999999998 89999999999999998763222222 2345789999999
Q ss_pred cCCceeeec-cceeEEEEeeC
Q psy14130 366 PKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 366 p~~~~~~~~-~~~~~~~~l~~ 385 (494)
|++.+++++ ++.+.+|....
T Consensus 261 ~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 261 NESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp ETTEEEEEESSSSEEEECCCC
T ss_pred CCCCEEEEEcCCcEEEEEeCC
Confidence 999988886 55556776654
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=9.8e-28 Score=234.96 Aligned_cols=236 Identities=16% Similarity=0.231 Sum_probs=186.9
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCC-------eEEEEecCC
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKG-------EALTVIDCH 218 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~-------~~~~~~~~h 218 (494)
..+.|+||++...+.. ......+.+|...|.+++|+| ++ .+|++|+.||+|++||+.++ +++..+.+|
T Consensus 55 ~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp SSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred CCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 3678999999664221 134456789999999999999 66 79999999999999999987 567889999
Q ss_pred CCceEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceEEEe--eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 219 PDVINCLSFNRDG-SRLVTTCKDKTVRVLDPRTGLVISQG--VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 219 ~~~v~~l~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
...|.+++|+|++ .+|++++.|+.|++||+++++.+..+ ..|... +..++|+|++..+++++ .|+.|++||+
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~d~~i~iwd~ 205 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT-IYSVDWSRDGALICTSC----RDKRVRVIEP 205 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC-EEEEEECTTSSCEEEEE----TTSEEEEEET
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc-eEEEEECCCCCEEEEEe----cCCcEEEEeC
Confidence 9999999999998 69999999999999999999999888 778877 99999999855555554 8999999999
Q ss_pred CCCCCceeEeeecCCC-ceEEeEEeCCCCEEEEEE---eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 296 NDLNTPLALETVDSSS-GVLFPYYDHDTRILFLAG---KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~g---~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
++......+. ..+.. .+..+.|+|++++| ++| +.|+.|++||+++++...... ...+...+.+++|+|++..+
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l-~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 206 RKGTVVAEKD-RPHEGTRPVHAVFVSEGKIL-TTGFSRMSERQVALWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp TTTEEEEEEE-CSSCSSSCCEEEECSTTEEE-EEEECTTCCEEEEEEETTBCSSCSEEE-ECCCCSSCEEEEEETTTTEE
T ss_pred CCCceeeeec-cCCCCCcceEEEEcCCCcEE-EEeccCCCCceEEEEcCccccCCceEE-eccCCCceeEEEEcCCCCEE
Confidence 8754432221 23333 37889999999877 777 789999999999876422221 22345679999999999877
Q ss_pred e-e--ccceeEEEEeeCCCCeEEEeE
Q psy14130 372 V-T--QCEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 372 ~-~--~~~~~~~~~l~~~~~~~~~~~ 394 (494)
+ + .|+.+++|++...+..+..+.
T Consensus 283 ~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEEEcCCCeEEEEEecCCCcceEeec
Confidence 4 3 389999999988442244433
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.9e-28 Score=231.90 Aligned_cols=209 Identities=12% Similarity=0.118 Sum_probs=163.0
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v~iw 246 (494)
.+.+|.+.|++++|+|++ ++||+|+.|++|++||+.+++ .+..+.+|.+.|++++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 456899999999999998 799999999999999998875 4678899999999999986 48999999999999999
Q ss_pred eCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCcee-EeeecCCCceEEeEEeCCC
Q psy14130 247 DPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLA-LETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 247 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 322 (494)
|+++++ .+..+.+|... +.+++|+|+. +.++++| +.|+.|++||++....... .....|...+.++.|+|+.
T Consensus 87 d~~~~~~~~~~~~~~h~~~-V~~v~~~p~~~g~~lasg---s~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSS-VNSVCWAPHDYGLILACG---SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp CCSSSCCCEEEEECCCSSC-CCEEEECCTTTCSCEEEE---CSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred ECCCCcceEEEEccCCCCc-eEEEEECCCCCCcEEEEE---cCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 999874 56777889887 9999999973 5677788 7999999999986432111 1112455778899999983
Q ss_pred -----------------CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC----ceeeec--cceeE
Q psy14130 323 -----------------RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR----GCDVTQ--CEIFR 379 (494)
Q Consensus 323 -----------------~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----~~~~~~--~~~~~ 379 (494)
++| ++|+.|+.|++||++.+........-..+...|++++|+|++ ..++++ |+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRF-ASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CC------CCSCCCCCCCBE-ECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred CCccccccccccCccccceE-EEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 556 999999999999997653211111112346789999999986 556654 99999
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|++..
T Consensus 242 iw~~~~ 247 (316)
T 3bg1_A 242 IWTCDD 247 (316)
T ss_dssp EEECSS
T ss_pred EEEccC
Confidence 999875
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=4.6e-27 Score=227.21 Aligned_cols=222 Identities=10% Similarity=0.103 Sum_probs=179.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--ecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV--IDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~l~ 226 (494)
+.|++||+.++.. ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.... +..|...|.+++
T Consensus 30 ~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 103 (372)
T 1k8k_C 30 HEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVR 103 (372)
T ss_dssp SEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEE
T ss_pred CEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEE
Confidence 4799999987721 2677888999999999999998 7999999999999999988875444 467999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce---EEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC---
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLV---ISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN--- 299 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~--- 299 (494)
|+|++++|++++.|+.|++||++.++. ...+ ..|... +..+.|+|++ .++++| +.|+.|++||++...
T Consensus 104 ~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~-~~l~~~---~~dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 104 WAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST-VLSLDWHPNS-VLLAAG---SCDFKCRIFSAYIKEVEE 178 (372)
T ss_dssp ECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC-EEEEEECTTS-SEEEEE---ETTSCEEEEECCCTTTSC
T ss_pred ECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC-eeEEEEcCCC-CEEEEE---cCCCCEEEEEcccccccc
Confidence 999999999999999999999998772 3333 456665 9999999985 455555 489999999975210
Q ss_pred ------------CceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 300 ------------TPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 300 ------------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
.......+ .+...+.+++|+|++++| ++++.||.|++||+++++.+..+. .+..++.+++|+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV-AWVSHDSTVCLADADKKMAVATLA---SETLPLLAVTFIT 254 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE-EEEETTTEEEEEEGGGTTEEEEEE---CSSCCEEEEEEEE
T ss_pred cccccccccccchhhheEecCCCCCeEEEEEECCCCCEE-EEEeCCCEEEEEECCCCceeEEEc---cCCCCeEEEEEec
Confidence 11112222 466789999999999988 889999999999999998755443 2356899999999
Q ss_pred CCceeeec-cceeEEEEeeC
Q psy14130 367 KRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~-~~~~~~~~l~~ 385 (494)
++.+++++ ++.+++|++..
T Consensus 255 ~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 255 ESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp TTEEEEEETTSSCEEEEEET
T ss_pred CCCEEEEEeCCeEEEEEccC
Confidence 99988775 89999999987
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-27 Score=225.24 Aligned_cols=186 Identities=17% Similarity=0.157 Sum_probs=154.0
Q ss_pred CcEEEEEcCCCCCCCCcc----cceEecccccc--cEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLN----EWIMDLHGHKR--RVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCHPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~----~~~~~~~~h~~--~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~ 221 (494)
+.|++||+........+. .....+..|.. .+.+++|+|++ .+|++++.|+.|++||+.+ ++.+..+..|...
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSC
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc
Confidence 369999998765432211 23455666776 99999999998 7999999999999999998 7888999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc-------------
Q psy14130 222 INCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR------------- 288 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~------------- 288 (494)
|.+++|+|++++|++++.|+.|++||+++++.+..+. +... +..+.|+|++..+++++ .++
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~ 294 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCP-LNTAVITPLKEFIILGG----GQEAKDVTTTSANEGK 294 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC-EEEEEECSSSSEEEEEE----CCC-------------
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCC-ceeEEecCCCceEEEee----cCCCceEEEEecCCCc
Confidence 9999999999999999999999999999999888887 4444 88999999966665555 555
Q ss_pred -eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 289 -QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 289 -~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+++||+.+......+ ..+...|.+++|+|++++| ++|+.||.|++|++..+.
T Consensus 295 ~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRV--QGHFGPLNTVAISPQGTSY-ASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp CEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEE-EEEETTSEEEEEEECHHH
T ss_pred ceeEEEecCCCcchhhe--ecccCcEEEEEECCCCCEE-EEEcCCCeEEEEECcccc
Confidence 8999999876543332 3467889999999999998 899999999999998764
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=232.84 Aligned_cols=216 Identities=18% Similarity=0.201 Sum_probs=143.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEe------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVI------------ 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~------------ 215 (494)
+.|++||+.++ ..+..+.+|...|.+++|+|++..+|++|+.||.|++||++++. .+..+
T Consensus 166 ~~v~~~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 166 PKVQLCDLKSG-------SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp SSEEEEESSSS-------CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred CeEEEEeCCCc-------ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 37999999887 56678889999999999999986589999999999999998765 44444
Q ss_pred ---cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 216 ---DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 216 ---~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
..|...|.+++|+|++++|++++.|+.|++||+++++.......+.. ..............+++++ .++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 314 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP----YGS 314 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE----ETT
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe----cCC
Confidence 56889999999999999999999999999999999886544433211 1122222233335566665 799
Q ss_pred eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 289 QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 289 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
.|++||+.+......+ ..|...|.+++|+|++++| ++|+.||.|++||+.+++++...... .....+.|..
T Consensus 315 ~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~~~~~~~~------~~~~~~~~~~ 385 (408)
T 4a11_B 315 TIAVYTVYSGEQITML--KGHYKTVDCCVFQSNFQEL-YSGSRDCNILAWVPSLYEPVPDDDET------TTKSQLNPAF 385 (408)
T ss_dssp EEEEEETTTCCEEEEE--CCCSSCEEEEEEETTTTEE-EEEETTSCEEEEEECC--------------------------
T ss_pred EEEEEECcCCcceeee--ccCCCeEEEEEEcCCCCEE-EEECCCCeEEEEeCCCCCccCCCCce------Eecccccccc
Confidence 9999999876543322 2466889999999999998 89999999999999998764322111 1112233322
Q ss_pred ceeee---ccceeEEEEee
Q psy14130 369 GCDVT---QCEIFRFFKLH 384 (494)
Q Consensus 369 ~~~~~---~~~~~~~~~l~ 384 (494)
....+ .++.+++|...
T Consensus 386 ~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 386 EDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -------------------
T ss_pred ceeecccCccCceeecCCc
Confidence 22221 37788888754
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.9e-28 Score=242.54 Aligned_cols=211 Identities=17% Similarity=0.178 Sum_probs=169.7
Q ss_pred eEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEE
Q psy14130 169 IMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRV 245 (494)
Q Consensus 169 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~i 245 (494)
.....+|...|+||+|||..+++||+|+.||+|+|||+.+++. ...+.+|.+.|++|+|+| ++.+|+||+.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3456679999999999997668999999999999999987653 445568999999999998 7899999999999999
Q ss_pred EeCCCCceEEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 246 LDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
||++++........+.. ..+..+.|+++ +.++++| +.|+.|++||++.. .... ...|...|.+++|+|+++.
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g---~~dg~i~~wd~~~~-~~~~--~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSAS-SRMVVTG---DNVGNVILLNMDGK-ELWN--LRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETT-TTEEEEE---CSSSBEEEEESSSC-BCCC--SBCCSSCEEEEEECTTCSS
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCC-CCEEEEE---eCCCcEeeeccCcc-eeEE--EecccceEEeeeecCCCce
Confidence 99987654333333322 12577899998 5677777 69999999998753 2222 2246688999999999987
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeCC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHTT 386 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~~ 386 (494)
++++|+.|+.|++||+++.+....+.....+..+|.+++|+|++.+++++ |+.+++|++...
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred EEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 77999999999999999877654444445567889999999999988875 899999999873
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=236.40 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=146.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc--ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG--HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCL 225 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l 225 (494)
+.|++||+.++ +.+..+.+ |...|++++|+|++ .+|++|+.||.|++||+++++++..+. .|...|+++
T Consensus 192 ~~i~iwd~~~~-------~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 192 SRVIIFDIRTL-------ERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp SEEEEEETTTC-------CEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred CeEEEEeCCCC-------eeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 47999999988 66777877 89999999999998 799999999999999999999999886 788899999
Q ss_pred EEcC----CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-------------------------CCceEEEEECCCCe
Q psy14130 226 SFNR----DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG-------------------------TRSSKAVFIGDTGR 276 (494)
Q Consensus 226 ~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~ 276 (494)
+|+| ++.+|++++.|+.|++||+++++++..+.+|.. ..+..++|+ + +.
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~-~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N-DK 341 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T-TE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C-ce
Confidence 6665 677999999999999999999998888876531 126778888 4 47
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeee-----------------------------------cCCCceEEeEEeCC
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETV-----------------------------------DSSSGVLFPYYDHD 321 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----------------------------------~~~~~v~~~~~~~~ 321 (494)
++++| +.|+.|++||+++......+... .|...|.+++|+++
T Consensus 342 ~l~s~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 342 ILLTD---EATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp EEEEE---GGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred EEEec---CCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 77777 79999999999876544333211 16678999999998
Q ss_pred --CCEEEEEEeCCCcEEEEE
Q psy14130 322 --TRILFLAGKGDGNIRYYE 339 (494)
Q Consensus 322 --~~~l~~~g~~dg~i~~wd 339 (494)
+.+| ++|+.||.|++|.
T Consensus 419 ~~~~~l-~s~~~dG~I~iw~ 437 (437)
T 3gre_A 419 DETPLL-VACDNSGLIGIFQ 437 (437)
T ss_dssp SSSEEE-EEEETTSCEEEEC
T ss_pred CCceEE-EEEcCCceEEEeC
Confidence 4455 9999999999994
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.4e-27 Score=228.54 Aligned_cols=213 Identities=12% Similarity=0.167 Sum_probs=176.9
Q ss_pred ceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeE
Q psy14130 168 WIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTV 243 (494)
Q Consensus 168 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v 243 (494)
.+..+.+|...|++++|+|++ .+|++|+.|+.|++||+. +++.+..+.+|...|++++|+++ +++|++++.|+.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 456788999999999999998 799999999999999998 55677889999999999999987 9999999999999
Q ss_pred EEEeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC
Q psy14130 244 RVLDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH 320 (494)
Q Consensus 244 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 320 (494)
++||+++++ .+..+..|... +..+.|+|+. +.++++| +.|+.|++||+++...........+...+.+++|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~---~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred EEEEcCCCceeEeeeecCCCcc-eEEEEeCCCCCCCEEEEe---cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 999999987 67777788877 9999999983 3444444 489999999999865544444456778899999999
Q ss_pred -------------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-cCCCCeeEEEEecC---Cceeeec--cceeEEE
Q psy14130 321 -------------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-LSGAPQRGLGFMPK---RGCDVTQ--CEIFRFF 381 (494)
Q Consensus 321 -------------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~p~---~~~~~~~--~~~~~~~ 381 (494)
++..+ ++|+.||.|++||+++++........+ .+..+|.+++|+|+ +.+++++ |+.+++|
T Consensus 158 ~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp CC----------CTTCEE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ccccccccccCCCCCCEE-EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 57777 899999999999999876543333222 24678999999999 7877775 8999999
Q ss_pred EeeCC
Q psy14130 382 KLHTT 386 (494)
Q Consensus 382 ~l~~~ 386 (494)
++...
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 99873
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.4e-27 Score=219.32 Aligned_cols=175 Identities=20% Similarity=0.340 Sum_probs=149.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~ 226 (494)
+.|++|| .+ .....+.+|...|.+++|+| ++ .++++++.|+.|++|| .++....+.. |...|.+++
T Consensus 124 ~~i~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 124 KTAKVWK--EG-------SLVYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp SEEEEEE--TT-------EEEEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE
T ss_pred CCEEEEc--CC-------cEEEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE
Confidence 4799999 33 66678889999999999998 55 7999999999999999 5667777777 999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
|+|++. +++++.|+.|++||+++++.+..+..|... +..++|+|++ .+++++ .|+.|++||+++......+
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~-~l~~~~----~dg~v~iwd~~~~~~~~~~-- 262 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF-VYCIKLLPNG-DIVSCG----EDRTVRIWSKENGSLKQVI-- 262 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTS-CEEEEE----TTSEEEEECTTTCCEEEEE--
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce-EEEEEEecCC-CEEEEe----cCCEEEEEECCCCceeEEE--
Confidence 999998 999999999999999999999999999887 9999999985 666555 8999999999886543333
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
..+...+.+++|+|+++ + ++++.||.|++||+++++..
T Consensus 263 ~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 263 TLPAISIWSVDCMSNGD-I-IVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp ECSSSCEEEEEECTTSC-E-EEEETTSCEEEEESCGGGCC
T ss_pred eccCceEEEEEEccCCC-E-EEEeCCCcEEEEeCCCCcee
Confidence 23556899999999998 4 56889999999999987653
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.9e-26 Score=217.77 Aligned_cols=181 Identities=17% Similarity=0.270 Sum_probs=146.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE----ALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~~l 225 (494)
.+++|+..... ..+..+.+|...+.++.|++++ .+|++++.|++|++||+++++ .......|.+.|.++
T Consensus 130 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 202 (318)
T 4ggc_A 130 HIHHHDVRVAE------HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 202 (318)
T ss_dssp EEEEEETTSSS------CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEE
T ss_pred ceEeeecCCCc------eeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEE
Confidence 58889887653 4566788999999999999998 799999999999999998765 345566788999999
Q ss_pred EEcCCCCEE---EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 226 SFNRDGSRL---VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 226 ~~~~~~~~l---~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
+++|++..+ ++++.++.|++||.+.......... ... +..+.|.+++..+++++. +.|+.|++||+++.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~-~~~-v~~~~~~~~~~~~~~~sg--~~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQ-VCSILWSPHYKELISGHG--FAQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC-SSC-EEEEEEETTTTEEEEEEC--TTTCCEEEEETTTCCEEE
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccc-eee-eeeeeecccccceEEEEE--cCCCEEEEEECCCCcEEE
Confidence 999976533 4567889999999998886666543 344 788999999877776541 579999999998865433
Q ss_pred eEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 303 ALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+ ..|...|.+++|+|++++| ++|+.||+|++||+....
T Consensus 279 ~l--~gH~~~V~~l~~spdg~~l-~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 279 EL--KGHTSRVLSLTMSPDGATV-ASAAADETLRLWRCFELD 317 (318)
T ss_dssp EE--CCCSSCEEEEEECTTSSCE-EEEETTTEEEEECCSCCC
T ss_pred EE--cCCCCCEEEEEEcCCCCEE-EEEecCCeEEEEECCCCC
Confidence 32 2467899999999999998 999999999999997654
No 107
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.5e-27 Score=228.68 Aligned_cols=178 Identities=12% Similarity=0.056 Sum_probs=144.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--ecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV--IDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~l~ 226 (494)
+.|+|||+.++ +++..+. |...|.+++|+|+| ++|++++.| .+++|+..+++.+.. ...|...|.+++
T Consensus 157 ~~i~iwd~~~~-------~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 157 AIMRIIDPSDL-------TEKFEIE-TRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp CEEEEEETTTT-------EEEEEEE-CSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CEEEEeECCCC-------cEEEEeC-CCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 36999999988 5666665 78889999999998 799999855 567777777765543 456889999999
Q ss_pred EcCCCCEEEEEeCCC----eEEEEeCCCCce----EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 227 FNRDGSRLVTTCKDK----TVRVLDPRTGLV----ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~----~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
|+|+++++++++.|+ .+++||+..+.. ...+..|... +.+++|+|+ +.+|++| +.|++|+|||++++
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-V~~~~~Spd-g~~lasg---s~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG-ITSMDVDMK-GELAVLA---SNDNSIALVKLKDL 301 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC-EEEEEECTT-SCEEEEE---ETTSCEEEEETTTT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC-eEeEEECCC-CCceEEE---cCCCEEEEEECCCC
Confidence 999999999999887 689999887653 3456778777 999999998 5677777 69999999999875
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+.... ....|...|.+++|+|||++| ++|+.|++|+|||+...
T Consensus 302 ~~~~~-~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 302 SMSKI-FKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEE-ETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCTT
T ss_pred cEEEE-ecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCCC
Confidence 43222 122477899999999999999 99999999999999754
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=9.6e-27 Score=230.39 Aligned_cols=298 Identities=15% Similarity=0.216 Sum_probs=189.1
Q ss_pred CccccceeeEEECCCCCeeEEeecCCCcEEEEeeeecccccccccCcccccccccceeecCCceEEEEEEEecCceEEEE
Q psy14130 3 KLYRGPVLDIKWNPFNDNIIASCSDDCTFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVL 82 (494)
Q Consensus 3 ~gH~~~V~~v~fsp~~~~~l~sgs~Dg~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~ 82 (494)
.+|..+|+|++| ++++|++|+.||+|+ +|+....+...... .... .-..+..++..+ .....+|.+.++
T Consensus 130 ~~~~~~v~~~~~---d~~~l~~g~~dg~i~-iwd~~~~~~~~~~~--~h~~--~v~~l~~~~~~l---~sg~~dg~i~vw 198 (435)
T 1p22_A 130 SETSKGVYCLQY---DDQKIVSGLRDNTIK-IWDKNTLECKRILT--GHTG--SVLCLQYDERVI---ITGSSDSTVRVW 198 (435)
T ss_dssp CSSCCCEEEEEC---CSSEEEEEESSSCEE-EEESSSCCEEEEEC--CCSS--CEEEEECCSSEE---EEEETTSCEEEE
T ss_pred cCCCCcEEEEEE---CCCEEEEEeCCCeEE-EEeCCCCeEEEEEc--CCCC--cEEEEEECCCEE---EEEcCCCeEEEE
Confidence 689999999999 456999999999999 88887665322110 0000 000011122211 122233444443
Q ss_pred eccccccccCCCCceeecccCCccceeeceeccCCccCCCeeeeCCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCC
Q psy14130 83 PIHRFRGVRSSKFRHVYGVHSKRDGCYDNVPITRNAHDSHFCAANPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLS 162 (494)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~ 162 (494)
.+... + ....+ ......+..+.+++..++.+ ..++.|++||+.++...
T Consensus 199 d~~~~------~-------------~~~~~--~~h~~~v~~l~~~~~~l~s~-----------s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 199 DVNTG------E-------------MLNTL--IHHCEAVLHLRFNNGMMVTC-----------SKDRSIAVWDMASPTDI 246 (435)
T ss_dssp ESSSC------C-------------EEEEE--CCCCSCEEEEECCTTEEEEE-----------ETTSCEEEEECSSSSCC
T ss_pred ECCCC------c-------------EEEEE--cCCCCcEEEEEEcCCEEEEe-----------eCCCcEEEEeCCCCCCc
Confidence 33211 0 00000 01112222333344322221 12247999999887332
Q ss_pred CCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe
Q psy14130 163 GNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT 242 (494)
Q Consensus 163 ~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~ 242 (494)
.....+.+|...|.+++| ++ ++|++|+.|+.|++||+++++.+..+.+|...|.+++|+ +.++++|+.|+.
T Consensus 247 ----~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~ 317 (435)
T 1p22_A 247 ----TLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 317 (435)
T ss_dssp ----EEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred ----eeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCe
Confidence 233677899999999999 44 699999999999999999999999999999999999994 789999999999
Q ss_pred EEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc-------eeEeeecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP-------LALETVDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~-------~~~~~~~~~~~v~~ 315 (494)
|++||+++++++..+.+|... +.++.+ + +.++++| +.||.|++||+++...+ .......|...|.+
T Consensus 318 i~iwd~~~~~~~~~~~~h~~~-v~~~~~--~-~~~l~sg---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 390 (435)
T 1p22_A 318 IRLWDIECGACLRVLEGHEEL-VRCIRF--D-NKRIVSG---AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 390 (435)
T ss_dssp EEEEETTTCCEEEEECCCSSC-EEEEEC--C-SSEEEEE---ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC
T ss_pred EEEEECCCCCEEEEEeCCcCc-EEEEEe--c-CCEEEEE---eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEE
Confidence 999999999999999999887 888887 4 4556666 58999999998654321 22223356678999
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
++| +++.| ++|+.||.|++||+.++...... ....+..++.|.+
T Consensus 391 l~~--~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~ 434 (435)
T 1p22_A 391 LQF--DEFQI-VSSSHDDTILIWDFLNDPAAQAE----PPRSPSRTYTYIS 434 (435)
T ss_dssp EEE--CSSCE-EECCSSSEEEEEC---------------------------
T ss_pred EEe--CCCEE-EEEeCCCEEEEEECCCCCCcccC----CCCCCccceeeec
Confidence 988 67777 89999999999999887643222 2234566666654
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=2.6e-26 Score=245.42 Aligned_cols=220 Identities=15% Similarity=0.200 Sum_probs=190.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+|||+.++ ..+..+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++.+..+.+|.+.|++++|+
T Consensus 35 g~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 35 GRVEIWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (814)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CEEEEEECCCC-------ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe
Confidence 47999999988 6778888999999999999998 799999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|++++|++++.|+.|++||++++ .....+.+|... +..+.|+|.++.++++| +.|+.|++||+++........ .
T Consensus 107 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~---~~dg~v~vwd~~~~~~~~~~~-~ 181 (814)
T 3mkq_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPSTFASG---CLDRTVKVWSLGQSTPNFTLT-T 181 (814)
T ss_dssp SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC-EEEEEEETTEEEEEEEE---ETTSEEEEEETTCSSCSEEEE-C
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc-EEEEEEEcCCCCEEEEE---eCCCeEEEEECCCCcceeEEe-c
Confidence 99999999999999999999987 577788888887 99999999446667777 589999999998765544333 2
Q ss_pred cCCCceEEeEEeC--CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDH--DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~--~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+...+.+++|+| ++..| ++|+.||.|++||+.+++....+. .+..+|.+++|+|++..++++ |+.+++|++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSCVATLE---GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEE-EEECTTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEEECCCCCEE-EEEeCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 3447899999999 88888 889999999999999987644432 235789999999999887775 899999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 258 ~~ 259 (814)
T 3mkq_A 258 ST 259 (814)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=9.6e-27 Score=214.86 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=134.4
Q ss_pred CcEEEEEcCC-CCCCCCcccceEecccccccEEEEEEcC---CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC---Cc
Q psy14130 149 HRVKLWYIPD-GGLSGNLNEWIMDLHGHKRRVGYIEWHP---TAENVVASAGFDYLIILWDVGKGEALTVIDCHP---DV 221 (494)
Q Consensus 149 ~~v~iw~~~~-~~~~~~~~~~~~~~~~h~~~V~~~~~~p---~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~---~~ 221 (494)
+.|++|++.. + +.+..+.+|...++.++|+| ++ .+||+|+.|++|+|||+.+++++.++.+|. ..
T Consensus 157 ~~V~~~~~s~dG-------~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 157 QQVEVMTFAEDG-------GGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp CEEEEEEECTTS-------CEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred CcEEEEEECCCC-------ceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 4799999954 5 55667788999999999999 65 699999999999999999999999998654 36
Q ss_pred eEEEEEcCCCCEE------------EEEeCCCeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 222 INCLSFNRDGSRL------------VTTCKDKTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 222 v~~l~~~~~~~~l------------~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
+.+++|+|+|.++ ++|+.|++|++||+.+++.+..+. +|... .....+. +.++++|
T Consensus 229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-~lsg~~s---g~~lASg--- 301 (356)
T 2w18_A 229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-FLEGDVK---DHCAAAI--- 301 (356)
T ss_dssp CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-EEEEEEE---TTEEEEE---
T ss_pred eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-eEccccC---CCEEEEE---
Confidence 7788999999876 568889999999999999776652 44443 3322332 4577777
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceE-EeEEeCCCCEEEEEEeCCCcEEEEEe
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVL-FPYYDHDTRILFLAGKGDGNIRYYEL 340 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~g~~dg~i~~wd~ 340 (494)
+.|++|+|||+.+++....+. +|...+. .++|+|||++| ++|+.|++|++||+
T Consensus 302 S~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPDG~~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 302 LTSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGTDSHL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSSSSEE-EEECTTSCEEEEEE
T ss_pred cCCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCCCCEE-EEEECCCcEEEecC
Confidence 689999999999866433322 2444444 58999999999 99999999999996
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=9.2e-26 Score=223.02 Aligned_cols=217 Identities=13% Similarity=0.140 Sum_probs=175.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+..|...+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 191 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 262 (433)
T 3bws_A 191 NAVHVFDLKTL-------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLS 262 (433)
T ss_dssp TEEEEEETTTC-------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEEC
T ss_pred CEEEEEECCCc-------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEc
Confidence 47999999887 5666777899999999999998544467778999999999999988888754 569999999
Q ss_pred CCCCEEEEEe--------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 229 RDGSRLVTTC--------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 229 ~~~~~l~s~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
|+|+.|++++ .|+.|++||+++++.+..+. |... +..++|+|++..+++++ +.++.|++||+.+...
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~-~~~~~~~~~g~~l~~~~---~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGN-KRHIVSGNTENKIYVSD---MCCSKIEVYDLKEKKV 337 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEEC-EEEEEECSSTTEEEEEE---TTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCC-cceEEECCCCCEEEEEe---cCCCEEEEEECCCCcE
Confidence 9999999988 58899999999998776653 3333 78899999977898988 7899999999986443
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeC--------------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEec
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKG--------------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP 366 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--------------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p 366 (494)
...+.+...+..++|+|+++.+++++.. ||.|++||+.+++....+. ....+.+++|+|
T Consensus 338 ---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~ 410 (433)
T 3bws_A 338 ---QKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----AGNQPTGLDVSP 410 (433)
T ss_dssp ---EEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----CSSSEEEEEECT
T ss_pred ---EEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----CCCCCceEEEcC
Confidence 2334466789999999999998555543 5799999999987643332 245789999999
Q ss_pred CCceeeec---cceeEEEEeeC
Q psy14130 367 KRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~---~~~~~~~~l~~ 385 (494)
++..+++. ++.+++|++..
T Consensus 411 dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 411 DNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TSCEEEEEETTTTEEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEecC
Confidence 99876642 89999999863
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.1e-26 Score=220.40 Aligned_cols=220 Identities=10% Similarity=0.083 Sum_probs=168.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC---------CCeEEEEec-CC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG---------KGEALTVID-CH 218 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~---------~~~~~~~~~-~h 218 (494)
+.|++||+.++ +.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+. +|
T Consensus 58 g~v~iwd~~~~-------~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 58 GALHFTQLKDS-------KTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp TEEEEEEESSS-------SCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CcEEEEECCCC-------cEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 47999999988 4444443 466888889887 9999999999999765 455455544 67
Q ss_pred CCceEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 219 PDVINCLSFNR--DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 219 ~~~v~~l~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+.|.+++|+| ++++|++++.|++|++||+++++.+.....+....+.+++|+|+ +.++++| +.|+.|++||++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg---~~dg~i~iwd~~ 200 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALY---SPDGILDVYNLS 200 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEE---CTTSCEEEEESS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEE---cCCCEEEEEECC
Confidence 78999999999 99999999999999999999999877665555444899999998 6788887 799999999999
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCe--eEEEEecCCceeee-
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQ--RGLGFMPKRGCDVT- 373 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~~~- 373 (494)
+...........|...|.+++|+|++.+| ++++ |+.|++||+++++....+.....+..++ .+++|+|++.++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l-~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWM-VVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEE-EEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEE-EEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 87654222222367899999999999999 7777 5599999999987642221110111223 46999999999988
Q ss_pred -c-cceeEEEEeeCCC
Q psy14130 374 -Q-CEIFRFFKLHTTR 387 (494)
Q Consensus 374 -~-~~~~~~~~l~~~~ 387 (494)
+ ++.+++|++....
T Consensus 279 s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKT 294 (343)
T ss_dssp ETTTTEEEEEEECTTT
T ss_pred cCCCCcEEEEEEcccc
Confidence 7 9999999997643
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.9e-26 Score=218.97 Aligned_cols=221 Identities=12% Similarity=0.054 Sum_probs=179.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCC-EEEEEeCCCeEEEEEC-CCCeEEEEecC--CCCceE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN-VVASAGFDYLIILWDV-GKGEALTVIDC--HPDVIN 223 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~d~~v~iwd~-~~~~~~~~~~~--h~~~v~ 223 (494)
++.|+||++.++... .....+.+|...|.+++|+|++ . +|++|+.|+.|++||+ .+++. ..+.+ |...|.
T Consensus 32 d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 32 DGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGIC 105 (342)
T ss_dssp TSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEE
T ss_pred CCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceE
Confidence 357999999877311 1244556899999999999997 8 9999999999999999 77754 77888 999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRT---------GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+++|+| +.+|++++.|+.|++||+++ ++++..+. |... +..+.|+++. + ++| +.|+.|++||
T Consensus 106 ~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~~~~~~--l-~~~---~~d~~i~i~d 176 (342)
T 1yfq_A 106 RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK-IFTMDTNSSR--L-IVG---MNNSQVQWFR 176 (342)
T ss_dssp EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC-EEEEEECSSE--E-EEE---ESTTEEEEEE
T ss_pred EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc-eEEEEecCCc--E-EEE---eCCCeEEEEE
Confidence 999999 99999999999999999987 77666666 6665 8999998873 4 444 4899999999
Q ss_pred CCC-CCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCC------CceEEeccccc-------CCCCe
Q psy14130 295 END-LNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNE------RPYIHFLNQSL-------SGAPQ 359 (494)
Q Consensus 295 ~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~------~~~~~~~~~~~-------~~~~v 359 (494)
+++ ...........+...+.+++|+| +++.+ ++|+.||.|++|++... +....+ ..+. +..+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSIDGRVAVEFFDDQGDDYNSSKRFAF-RCHRLNLKDTNLAYPV 254 (342)
T ss_dssp SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEETTSEEEEEECCTTCCSTTCTTCEEE-ECCCCCTTCCSSCCCE
T ss_pred CCccccccceeeecCCCCceeEEEECCCCCCEE-EEEecCCcEEEEEEcCCCcccccccceee-ecccccccccccceeE
Confidence 998 65544445556678899999999 99988 88999999999999887 544333 2222 13489
Q ss_pred eEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 360 RGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 360 ~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.+++|+|++.+++++ ++.+++|++..
T Consensus 255 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 255 NSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 999999999888775 88999999987
No 114
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=229.07 Aligned_cols=229 Identities=14% Similarity=0.166 Sum_probs=170.5
Q ss_pred CcEEEEEcCCCCCC----CCcccceEeccccc------------ccEEEEEEcCCCC-CEEEEEeCCCeEEEEECCCCeE
Q psy14130 149 HRVKLWYIPDGGLS----GNLNEWIMDLHGHK------------RRVGYIEWHPTAE-NVVASAGFDYLIILWDVGKGEA 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~----~~~~~~~~~~~~h~------------~~V~~~~~~p~~~-~~l~s~s~d~~v~iwd~~~~~~ 211 (494)
+.|+||++.++... .........+.+|. ..|.+++|+|++. ..|++++.|++|++||+.++..
T Consensus 50 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 50 GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDK 129 (447)
T ss_dssp SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEE
T ss_pred CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccC
Confidence 47999999876410 01112467888998 8899999999963 4899999999999999976443
Q ss_pred E---------------------------------------EE-ecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 212 L---------------------------------------TV-IDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 212 ~---------------------------------------~~-~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
. .. ..+|...|++++|+|++++|++| .|+.|++||++++
T Consensus 130 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~ 208 (447)
T 3dw8_B 130 RPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEIT 208 (447)
T ss_dssp EEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEE
T ss_pred CcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCC
Confidence 2 12 36799999999999999999998 7999999999944
Q ss_pred -ceEE-------EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-eEeeec-CCC----------
Q psy14130 252 -LVIS-------QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL-ALETVD-SSS---------- 311 (494)
Q Consensus 252 -~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~-~~~---------- 311 (494)
+.+. .+..|... +..++|+|++..++++| +.|+.|++||+++..... ....+. +..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 3dw8_B 209 DRSFNIVDIKPANMEELTEV-ITAAEFHPNSCNTFVYS---SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEI 284 (447)
T ss_dssp EEEEEEEECCCSSGGGCCCC-EEEEEECSSCTTEEEEE---ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHH
T ss_pred CceeeeeecccccccccCcc-eEEEEECCCCCcEEEEE---eCCCeEEEEECcCCccccceeeEeccCCCcccccccccc
Confidence 3444 24577776 99999999964677777 699999999998765311 011122 222
Q ss_pred --ceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC-CCceEEecccccCC----------C---CeeEEEEecCCceeeec-
Q psy14130 312 --GVLFPYYDHDTRILFLAGKGDGNIRYYELTN-ERPYIHFLNQSLSG----------A---PQRGLGFMPKRGCDVTQ- 374 (494)
Q Consensus 312 --~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~-~~~~~~~~~~~~~~----------~---~v~~~~~~p~~~~~~~~- 374 (494)
.+.+++|+|++++| ++++. +.|++||+++ ++++..+.. +... . .+..++|+|++.+++++
T Consensus 285 ~~~v~~~~~s~~g~~l-~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 285 ISSISDVKFSHSGRYM-MTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp TTCEEEEEECTTSSEE-EEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred CceEEEEEECCCCCEE-EEeeC-CeEEEEeCCCCccccceeec-cccccccccccccccccccceEEEECCCCCEEEEec
Confidence 79999999999998 77877 9999999997 665433322 1110 0 13349999999988875
Q ss_pred -cceeEEEEeeC
Q psy14130 375 -CEIFRFFKLHT 385 (494)
Q Consensus 375 -~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 362 ~dg~v~iwd~~~ 373 (447)
T 3dw8_B 362 YNNFFRMFDRNT 373 (447)
T ss_dssp STTEEEEEETTT
T ss_pred cCCEEEEEEcCC
Confidence 89999999987
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.2e-25 Score=221.63 Aligned_cols=202 Identities=13% Similarity=0.083 Sum_probs=165.5
Q ss_pred cccccEEEEEEcCCCCCE-EEEEeCCCeEEEEECC--CCeEEEEec--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 174 GHKRRVGYIEWHPTAENV-VASAGFDYLIILWDVG--KGEALTVID--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~-l~s~s~d~~v~iwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
+|...|.+++|+|++ .+ +++|+.|+.|++||+. +++.+..+. .|...|++++|+|++++|++++.|+.|++||+
T Consensus 100 ~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 466689999999998 56 5999999999999999 888887776 57789999999999999999999999999999
Q ss_pred CCCceEE----EeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCC
Q psy14130 249 RTGLVIS----QGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDT 322 (494)
Q Consensus 249 ~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (494)
.+++... .+.+|... +..+.|+|+ ++.++++| +.|+.|++||+++...... ....|...|.+++|+ ++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~~~~l~s~---~~d~~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSM-LTDVHLIKDSDGHQFIITS---DRDEHIKISHYPQCFIVDK-WLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp TSCCCSSCCCCCSEECSSC-EEEEEEEECTTSCEEEEEE---ETTSCEEEEEESCTTCEEE-ECCCCSSCEEEEEEC-ST
T ss_pred CCcccccccceeeecccCc-eEEEEEcCCCCCCcEEEEE---cCCCcEEEEECCCCceeee-eecCCCCceEEEEEC-CC
Confidence 8887544 77888877 999999998 24455555 5899999999987654322 223567889999999 99
Q ss_pred CEEEEEEeCCCcEEEEEeeCCCceEEecccc----------------------cCCCCeeEEEEecCCceeee---ccce
Q psy14130 323 RILFLAGKGDGNIRYYELTNERPYIHFLNQS----------------------LSGAPQRGLGFMPKRGCDVT---QCEI 377 (494)
Q Consensus 323 ~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~p~~~~~~~---~~~~ 377 (494)
++| ++|+.|+.|++||+.+++.+..+.... .....+.+++|+|++.++++ .++.
T Consensus 253 ~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 253 YLL-LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp TEE-EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred CEE-EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 998 899999999999999998755442110 22356899999999987766 3789
Q ss_pred eEEEEe
Q psy14130 378 FRFFKL 383 (494)
Q Consensus 378 ~~~~~l 383 (494)
+++|++
T Consensus 332 i~iw~~ 337 (450)
T 2vdu_B 332 IIILEM 337 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999999
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1e-24 Score=212.55 Aligned_cols=216 Identities=13% Similarity=0.113 Sum_probs=174.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 54 ~~i~v~d~~~~-------~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s 124 (391)
T 1l0q_A 54 NDVSIIDTATN-------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALS 124 (391)
T ss_dssp TEEEEEETTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEEC
T ss_pred CeEEEEECCCC-------eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEEC
Confidence 47999999887 5556666454 89999999998544566777899999999999988888754 578999999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
|+++.| ++++.|+.|++||+++++.+..+..+.. +..++|+|++..+++++ ..++.|++||+++... ....
T Consensus 125 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~---~~~~~v~~~d~~~~~~---~~~~ 196 (391)
T 1l0q_A 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS--PKGIAVTPDGTKVYVAN---FDSMSISVIDTVTNSV---IDTV 196 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEE---TTTTEEEEEETTTTEE---EEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC--cceEEECCCCCEEEEEe---CCCCEEEEEECCCCeE---EEEE
Confidence 999977 6888899999999999998888876644 68899999977887888 7899999999987543 2333
Q ss_pred cCCCceEEeEEeCCCCEEEEEEe--CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-ee--ccceeEEEE
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGK--GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VT--QCEIFRFFK 382 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~--~~~~~~~~~ 382 (494)
.+...+.+++|+|++++|++++. .++.|++||+.+++.+..+. ....+.+++|+|++..+ ++ .++.+++|+
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----VGPDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE----CCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe----cCCCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 45667899999999999966655 79999999999887643332 23457899999999765 44 389999999
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+.+
T Consensus 273 ~~~ 275 (391)
T 1l0q_A 273 TAT 275 (391)
T ss_dssp TTT
T ss_pred CCC
Confidence 887
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=3.5e-25 Score=204.46 Aligned_cols=228 Identities=10% Similarity=0.001 Sum_probs=155.4
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccc-------------------------cEEEEEEcCC----CCCEEE
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-------------------------RVGYIEWHPT----AENVVA 193 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~~~~~p~----~~~~l~ 193 (494)
+++.....|++|+..+... .+.++++.+|+. .|.+++|+|+ + +.++
T Consensus 57 ~~~~~~~~v~lw~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~-~~l~ 131 (356)
T 2w18_A 57 IITACEDVVSLWKALDAWQ----WEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEK-QVLL 131 (356)
T ss_dssp EEEEESSEEEEEEESSSSB----EEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CC-EEEE
T ss_pred EEEeccceEEEcccCCCcc----ceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccc-cEEE
Confidence 3344555799999887611 133444555544 5666667777 5 4666
Q ss_pred EEeC--------------------CCeEEEEECC-CCeEEEEecCCCCceEEEEEcC---CCCEEEEEeCCCeEEEEeCC
Q psy14130 194 SAGF--------------------DYLIILWDVG-KGEALTVIDCHPDVINCLSFNR---DGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 194 s~s~--------------------d~~v~iwd~~-~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~ 249 (494)
+++. |+.|++|++. +++.+..+.+|...++.++|++ ++.+|++++.|++|+|||++
T Consensus 132 s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 132 KSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred eCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 6553 8888888884 4777777778888888888888 67899999999999999999
Q ss_pred CCceEEEeeecCC--CCceEEEEECCCCeEE-----------EEEecCCCCceEEEEeCCCCCCceeEe---eecCCCce
Q psy14130 250 TGLVISQGVCHPG--TRSSKAVFIGDTGRIV-----------TTGFSRHSDRQVGLWDENDLNTPLALE---TVDSSSGV 313 (494)
Q Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~-----------~~g~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~v 313 (494)
+|++++++.+|.. ..+..++|+|++..++ ++| +.|++|++||..+........ ...+...+
T Consensus 212 TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG---s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 212 TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR---SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc---CCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 9999999986543 2256778999854432 455 789999999998754322111 01222233
Q ss_pred EEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 314 LFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.+..++ +..+ ++|+.|++|+|||+.+++.+..+. .+. ...+..++|+|++.+++++ |+++|+|++
T Consensus 289 lsg~~s--g~~l-ASgS~DgTIkIWDl~tGk~l~tL~-gH~-~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVK--DHCA-AAILTSGTIAIWDLLLGQCTALLP-PVS-DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEE--TTEE-EEEETTSCEEEEETTTCSEEEEEC-CC---CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccC--CCEE-EEEcCCCcEEEEECCCCcEEEEec-CCC-CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 333333 5566 999999999999999999765543 221 2234568999999998885 999999986
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=7.6e-26 Score=220.67 Aligned_cols=179 Identities=10% Similarity=0.025 Sum_probs=128.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE--------------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-------------- 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-------------- 214 (494)
++|+|||+.++ .+...+.+|...|.+++|+|++.++|++|+.|++|++||+++++....
T Consensus 166 ~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 166 CTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp SEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred CeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 47999999877 666777889999999999999767899999999999999988754322
Q ss_pred -----------ecCCCCceEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----------------Cc
Q psy14130 215 -----------IDCHPDVINCLSFN-RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----------------RS 265 (494)
Q Consensus 215 -----------~~~h~~~v~~l~~~-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----------------~~ 265 (494)
..+|...+.++.|+ ++++.|++++.|+++++||+..++....+..|... ..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred cccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence 23577889999987 79999999999999999999887765555444322 01
Q ss_pred eEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 266 SKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 266 ~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
....+.+ .++.++++| +.|+.|++||+.+....... ..+...|.+++|+|||++| ++++.|| +.+|.+.
T Consensus 319 ~~~~~~~~~~~~~~~sg---s~Dg~V~lwd~~~~~~~~~~--~~~~~~V~svafspdG~~L-A~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAH---SQHGLIQLINTYEKDSNSIP--IQLGMPIVDFCWHQDGSHL-AIATEGS-VLLTRLM 388 (393)
T ss_dssp SCCEECSSCTTEEEEEE---TTTTEEEEEETTCTTCCEEE--EECSSCEEEEEECTTSSEE-EEEESSE-EEEEEEG
T ss_pred eeEEEccCCCCEEEEEE---CCCCEEEEEECCCCcEEEEe--cCCCCcEEEEEEcCCCCEE-EEEeCCC-eEEEEEe
Confidence 2233444 345677888 88999999999886654433 3466789999999999999 7887655 6666654
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=2.7e-24 Score=213.40 Aligned_cols=214 Identities=23% Similarity=0.370 Sum_probs=176.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.+|...|.+++|++ ..+++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 179 g~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 179 RTLKVWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY- 247 (445)
T ss_dssp SCEEEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-
T ss_pred CeEEEEECCcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-
Confidence 47999999988 77788899999999999963 57999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
++.++++++.|+.|++||+++++.+..+.+|... +..+.| + +..+++| +.|+.|++||+++......+ ..
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~--~-~~~l~~~---~~d~~i~i~d~~~~~~~~~~--~~ 317 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF--D-GIHVVSG---SLDTSIRVWDVETGNCIHTL--TG 317 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC-EEEEEE--C-SSEEEEE---ETTSCEEEEETTTCCEEEEE--CC
T ss_pred -CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCc-eEEEEE--C-CCEEEEE---eCCCeEEEEECCCCCEEEEE--cC
Confidence 6889999999999999999999999999999887 888888 4 4455555 48999999999886543322 23
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeCC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~~ 386 (494)
+...+.++.+ +++.+ ++|+.||.|++||+++++.+..+.....+..+|.+++|+++.....+.|+.+++|++.++
T Consensus 318 ~~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 318 HQSLTSGMEL--KDNIL-VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp CCSCEEEEEE--ETTEE-EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CcccEEEEEE--eCCEE-EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCC
Confidence 5566776666 45666 899999999999999998766655444467889999997643333345999999999873
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=8.8e-25 Score=208.56 Aligned_cols=208 Identities=15% Similarity=0.112 Sum_probs=169.3
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCCCCceEEEEEcC--CCCEEEEEeCCCeE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCHPDVINCLSFNR--DGSRLVTTCKDKTV 243 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~d~~v 243 (494)
..+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.|+.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3567899999999999998 79999999999999999876 46777889999999999999 69999999999999
Q ss_pred EEEeCCCC---------ceEEEeeecCCCCceEEEEECC--CCeEEEEEecCCCCceEEEEeCCCCCCceeEe-------
Q psy14130 244 RVLDPRTG---------LVISQGVCHPGTRSSKAVFIGD--TGRIVTTGFSRHSDRQVGLWDENDLNTPLALE------- 305 (494)
Q Consensus 244 ~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~------- 305 (494)
++||++++ +.+..+..|... +..+.|+|+ +..+++++ .|+.|++||+++........
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~----~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGS-LYSVKFAPAHLGLKLACLG----NDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEE----TTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred EEEecCCCcccccccCcceeeeecccCCc-eeEEEEcCCCCCcEEEEec----CCCcEEEecCCChHHhccccccccccc
Confidence 99999987 557788888887 999999998 55555555 89999999998765432221
Q ss_pred ----eecCCCceEEeEEeCC---CCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC----ceeeec
Q psy14130 306 ----TVDSSSGVLFPYYDHD---TRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR----GCDVTQ 374 (494)
Q Consensus 306 ----~~~~~~~v~~~~~~~~---~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----~~~~~~ 374 (494)
...+...+.++.|+|+ +..+ ++++.|+.+.+|+...++.. .......+..+|.+++|+|++ .+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l-~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKL-AVSALEQAIIYQRGKDGKLH-VAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEE-EEEETTEEEEEEECTTSCEE-EEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccccCCcccceeEEEeccCCCCCcEE-EEecCCCcEEEEccCCCcee-eeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 1135577899999997 7776 88999999988887776642 111222346789999999998 667664
Q ss_pred --cceeEEEEeeC
Q psy14130 375 --CEIFRFFKLHT 385 (494)
Q Consensus 375 --~~~~~~~~l~~ 385 (494)
|+.+++|++..
T Consensus 237 ~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 237 CKDGRIRIFKITE 249 (351)
T ss_dssp ETTSCEEEEEEEE
T ss_pred cCCCeEEEEeCCC
Confidence 89999999987
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.8e-26 Score=223.59 Aligned_cols=203 Identities=12% Similarity=0.087 Sum_probs=151.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccc-----cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------EEEEe
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-----RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-------ALTVI 215 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-------~~~~~ 215 (494)
.+.|+|||... .+..+. |.. .|.+++|||+| ++||+|+.||+|++||+.++. .+.++
T Consensus 106 dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 106 NGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp TSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred CCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 34799999532 344555 655 59999999998 799999999999999999875 35676
Q ss_pred ----cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---EEEee-ecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 216 ----DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV---ISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 216 ----~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
.+|.+.|.+++|+|+| +++++.|++|++||+..++. .+++. +|... +..++|+ + ..++++ .+
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~-V~svaFs--g-~~LASa----~~ 244 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRK-ITDLKIV--D-YKVVLT----CP 244 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSC-CCCEEEE--T-TEEEEE----CS
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCc-EEEEEEE--C-CEEEEE----eC
Confidence 6788999999999999 88999999999999988773 35664 66655 9999999 3 455555 26
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEE--eCCCCEEEEEEeCCCcEEEEEeeC-----CCceE-------------
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYY--DHDTRILFLAGKGDGNIRYYELTN-----ERPYI------------- 347 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~g~~dg~i~~wd~~~-----~~~~~------------- 347 (494)
++|++||+.+... .....+|...+..++| +|++..| ++++.||+ ++|.... ...+.
T Consensus 245 ~tIkLWd~~~~~~--~~~~~gh~~~V~~va~~~s~d~~~L-a~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~ 320 (588)
T 2j04_A 245 GYVHKIDLKNYSI--SSLKTGSLENFHIIPLNHEKESTIL-LMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTI 320 (588)
T ss_dssp SEEEEEETTTTEE--EEEECSCCSCCCEEEETTCSSCEEE-EECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTT
T ss_pred CeEEEEECCCCeE--EEEEcCCCceEEEEEeeeCCCCCEE-EEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECC
Confidence 9999999986432 1223367888999999 9999888 88889999 9998731 11000
Q ss_pred -EecccccCCCCeeEEEEecCCceeeecc
Q psy14130 348 -HFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 348 -~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
..+..+.+...|.+++|+|+|..++++.
T Consensus 321 g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 321 WNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp TTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred CCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 0011112223478899999988777654
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.2e-25 Score=234.14 Aligned_cols=211 Identities=12% Similarity=0.169 Sum_probs=172.8
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEEEcCC--CCEEEEEeCCCeEEE
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLSFNRD--GSRLVTTCKDKTVRV 245 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~d~~v~i 245 (494)
..+.+|.+.|++++|+|++ .+|++|+.||+|++||+. +++.+..+.+|.+.|++++|+|+ +++|++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 4578999999999999998 699999999999999998 45678889999999999999988 999999999999999
Q ss_pred EeCCCCc--eEEEeeecCCCCceEEEEECCC-CeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC--
Q psy14130 246 LDPRTGL--VISQGVCHPGTRSSKAVFIGDT-GRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-- 320 (494)
Q Consensus 246 wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 320 (494)
||+++++ .+..+..|... +.++.|+|+. +.++++| +.||.|++||+++...........+...+.++.|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~l~sg---s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEEEE---ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred EECCCCcccccccccCCCCC-eEEEEECCCCCCCEEEEE---eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 9999987 67777888887 9999999982 3445555 489999999998764444444456778999999999
Q ss_pred -----------CCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEEEecC---Cceeeec--cceeEEEEe
Q psy14130 321 -----------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLGFMPK---RGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 321 -----------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~p~---~~~~~~~--~~~~~~~~l 383 (494)
++..+ ++|+.||.|++||++++......... ..+..+|.+++|+|+ +..++++ |+.+++|++
T Consensus 158 ~~~~~~~~~~~d~~~l-~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGGCCE-EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCCCEE-EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 47777 89999999999999988643333222 234678999999999 7888775 899999999
Q ss_pred eCC
Q psy14130 384 HTT 386 (494)
Q Consensus 384 ~~~ 386 (494)
...
T Consensus 237 ~~~ 239 (753)
T 3jro_A 237 DNE 239 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 873
No 123
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=3e-24 Score=206.76 Aligned_cols=221 Identities=17% Similarity=0.178 Sum_probs=170.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE-
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF- 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~- 227 (494)
+.|+|||+.+.+. .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+. +.+|...|.+++|
T Consensus 64 g~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 64 NDVRCWEVQDSGQ-----TIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI 136 (368)
T ss_dssp SEEEEEEECTTSC-----EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred CcEEEEEcCCCCc-----eeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence 4799999987321 2336788899999999999998 799999999999999999988776 4559999999999
Q ss_pred -cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 -NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 -~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
++++++|++++.|+.|++||+++++.+..+..+.. +..+.+.++ .+++++ .++.+++||++..........
T Consensus 137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~----~~~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER--CYCADVIYP--MAVVAT----AERGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC--EEEEEEETT--EEEEEE----GGGCEEEEECSSSCEEEEECC
T ss_pred eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC--ceEEEecCC--eeEEEe----CCCcEEEEEeccccchhhhcc
Confidence 89999999999999999999999998888887753 566666654 455554 799999999987544333333
Q ss_pred ecCCCceEEeEEeCCCCE----EEEEEeCCCcEEEEEeeCCC---ceEEeccccc---------CCCCeeEEEEecCCce
Q psy14130 307 VDSSSGVLFPYYDHDTRI----LFLAGKGDGNIRYYELTNER---PYIHFLNQSL---------SGAPQRGLGFMPKRGC 370 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~----l~~~g~~dg~i~~wd~~~~~---~~~~~~~~~~---------~~~~v~~~~~~p~~~~ 370 (494)
........++.+.++... + ++|+.||.|++||++... ....+..... +..+|.+++|+|++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 287 (368)
T 3mmy_A 209 SPLKHQHRCVAIFKDKQNKPTGF-ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT 287 (368)
T ss_dssp CSCSSCEEEEEEEECTTSCEEEE-EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC
T ss_pred ccccCCCceEEEcccCCCCCCeE-EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE
Confidence 333345566666555543 5 899999999999999873 2222222111 1126999999999988
Q ss_pred eeec--cceeEEEEeeC
Q psy14130 371 DVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 371 ~~~~--~~~~~~~~l~~ 385 (494)
++++ |+.+++|++..
T Consensus 288 l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 288 LATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEEEETTSCEEEEETTT
T ss_pred EEEEccCCeEEEEECCC
Confidence 8775 89999999887
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=6.3e-24 Score=209.83 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=177.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
.|++||+.++..... .....+.+|...|.+++|+|++ .++++++.|+.|++||+.+++.+..+..|...+.+++|+|
T Consensus 145 ~i~~~d~~~g~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 221 (433)
T 3bws_A 145 GMDVLDINSGQTVRL--SPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP 221 (433)
T ss_dssp SEEEEETTTCCEEEE--CCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET
T ss_pred eEEEEECCCCeEeee--cCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC
Confidence 699999998743210 0111456899999999999998 7999999999999999999999999999999999999999
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC----CCceEEEEeCCCCCCceeE
Q psy14130 230 DGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH----SDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 230 ~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~----~d~~i~iwd~~~~~~~~~~ 304 (494)
+++.+++++ .|+.|++||+++++.+..+..+.. +..++|+|++..+++++.... .|+.|++||+++....
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~--- 296 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL--PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI--- 296 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE--EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE---
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC--ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE---
Confidence 999885554 799999999999998887766543 789999999767766663111 4889999999875432
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecc---------
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQC--------- 375 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~--------- 375 (494)
....+...+..++|+|+++.++++++.|+.|++||+.+++....+ .....+.+++|+|++..++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 297 DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI----PVFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE----ECSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe----cCCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 222334578889999999988899999999999999988754332 2356799999999998665532
Q ss_pred --------ceeEEEEeeC
Q psy14130 376 --------EIFRFFKLHT 385 (494)
Q Consensus 376 --------~~~~~~~l~~ 385 (494)
+.+++|++.+
T Consensus 373 ~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TTSCCSSCCEEEEEETTT
T ss_pred cccccccceEEEEEECCC
Confidence 4899999876
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.5e-23 Score=204.21 Aligned_cols=184 Identities=9% Similarity=0.057 Sum_probs=148.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|++||+.++ +.+..+.. ...+.+++|+|++..++++++.|+.|++||+.+++.+..+..+ ..+.+++|+
T Consensus 96 ~~v~v~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~ 166 (391)
T 1l0q_A 96 STLSVIDTTSN-------TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVT 166 (391)
T ss_dssp TEEEEEETTTT-------EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEEC
T ss_pred CEEEEEECCCC-------eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEEC
Confidence 47999999987 55555554 4568999999998544588899999999999999998888865 567999999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCC--CCceEEEEeCCCCCCceeEe
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH--SDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+++.| ++++.|+.|++||+++++.+..+..+. . +..++|+|++..+++++ . .++.|++||+++... ..
T Consensus 167 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-~~~~~~~~~g~~l~~~~---~~~~~~~v~~~d~~~~~~---~~ 238 (391)
T 1l0q_A 167 PDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A-PSGIAVNPEGTKAYVTN---VDKYFNTVSMIDTGTNKI---TA 238 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E-EEEEEECTTSSEEEEEE---ECSSCCEEEEEETTTTEE---EE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C-ccceEECCCCCEEEEEe---cCcCCCcEEEEECCCCeE---EE
Confidence 999987 577789999999999998877776443 3 78899999976666665 3 689999999987543 23
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.+.....+.+++|+|+++.|+++++.|+.|++||+.+++....+
T Consensus 239 ~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 239 RIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 33345568899999999999889899999999999998765443
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.9e-23 Score=200.81 Aligned_cols=208 Identities=9% Similarity=0.070 Sum_probs=151.7
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEE-EEEeCCCeEEE
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRL-VTTCKDKTVRV 245 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~d~~v~i 245 (494)
.++..+.+|...|.+++|+|+| ++|++|+.|+ +++||+.+++.+..... ..+..+++.++++.+ ++++.|++|++
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 5556678899999999999998 7999988765 78999988876655442 247888999988877 56778899999
Q ss_pred EeCCCCceEEEeeecCCCCceEEEEECCC-----------------------------------CeEEEE-EecCCCCce
Q psy14130 246 LDPRTGLVISQGVCHPGTRSSKAVFIGDT-----------------------------------GRIVTT-GFSRHSDRQ 289 (494)
Q Consensus 246 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~l~~~-g~~~~~d~~ 289 (494)
||+++++.+..+..+ .. +..+.++++. ..++++ | +.+|.
T Consensus 86 Wd~~~~~~~~~~~~~-~~-v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg---~~~g~ 160 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVD-AP-VKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE---FNLGQ 160 (355)
T ss_dssp EETTTTEEEEEEECS-SC-EEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES---SCTTC
T ss_pred EECCCCcEEEEEECC-Cc-eEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC---CcCcE
Confidence 999999988887643 33 6666665431 112222 4 67888
Q ss_pred EEEEeCCCCCC--------------ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc-EEEEEeeCCCceEEeccccc
Q psy14130 290 VGLWDENDLNT--------------PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN-IRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 290 i~iwd~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~-i~~wd~~~~~~~~~~~~~~~ 354 (494)
|++||+++... +.......|...|.+++|+|++++| ++|+.|++ |++||+++++.+..+... .
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~~~~~g-~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVREFRRG-L 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEEEEECT-T
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEEEEEcC-C
Confidence 88888876431 1012223567889999999999998 99999998 999999999876554321 1
Q ss_pred CCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 355 SGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+..+|.+++|+|++.+++++ |+.+++|++..
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 46789999999999988875 89999999976
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.5e-22 Score=197.01 Aligned_cols=213 Identities=13% Similarity=0.161 Sum_probs=162.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY---LIILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|++||+... ....+.+|...|.+++|+|+| +.|++++.|+ .|++||+.+++.. .+..|.+.+.+++
T Consensus 160 ~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~ 229 (415)
T 2hqs_A 160 ELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPA 229 (415)
T ss_dssp EEEEEETTSC--------SCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEE
T ss_pred eEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEE
Confidence 6999998743 345677899999999999999 6899998875 9999999988765 5667888999999
Q ss_pred EcCCCCEEE-EEeCCC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCc
Q psy14130 227 FNRDGSRLV-TTCKDK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTP 301 (494)
Q Consensus 227 ~~~~~~~l~-s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~ 301 (494)
|+|||+.|+ +++.|+ .|++||+++++. ..+..|... +..+.|+|++..+++++ ..++ .|.+||+.+...
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~spdg~~l~~~s---~~~g~~~i~~~d~~~~~~- 303 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN-NTEPTWFPDSQNLAFTS---DQAGRPQVYKVNINGGAP- 303 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC-EEEEEECTTSSEEEEEE---CTTSSCEEEEEETTSSCC-
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc-ccceEECCCCCEEEEEE---CCCCCcEEEEEECCCCCE-
Confidence 999999888 666655 499999998875 566667665 88999999977777776 3344 788889886542
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeC--CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cc-
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKG--DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CE- 376 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~- 376 (494)
..+ ..+...+..++|+|+|++|+.++.. +..|++||+.+++. ..+... ..+.+++|+|++..++.. ++
T Consensus 304 ~~l--~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~---~~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 304 QRI--TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSST---FLDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp EEC--CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCS---SSCEEEEECTTSSEEEEEEEETT
T ss_pred EEE--ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEecCC---CCcCCeEEcCCCCEEEEEEcCCC
Confidence 211 2244578889999999999555544 35899999998875 223222 378999999999877664 33
Q ss_pred --eeEEEEeeC
Q psy14130 377 --IFRFFKLHT 385 (494)
Q Consensus 377 --~~~~~~l~~ 385 (494)
.+.+|++..
T Consensus 377 ~~~l~~~d~~g 387 (415)
T 2hqs_A 377 GSVLNLVSTDG 387 (415)
T ss_dssp EEEEEEEETTS
T ss_pred ccEEEEEECCC
Confidence 567777654
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=5.1e-21 Score=193.58 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=164.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc----------ccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE--Ee
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG----------HKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT--VI 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~----------h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~--~~ 215 (494)
++|.|||..+. +++..+.. |.. .+.++.++|++..++++...++.|.+||+.+.+.+. .+
T Consensus 248 ~~v~v~D~~t~-------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 248 PQFAIMDGETL-------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp SEEEEEETTTC-------CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE
T ss_pred CeEEEEecccc-------ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe
Confidence 57999999887 44444432 333 789999999887788899999999999998765433 44
Q ss_pred cCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEEEeee----cCCCCceEEEEECCCCeEEEEEecCC-CCce
Q psy14130 216 DCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTTGFSRH-SDRQ 289 (494)
Q Consensus 216 ~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~~~-~d~~ 289 (494)
. +...+.++.|+|+|++|++++ .+++|.+||+.+++++..+.. |.+. ... .+.|+++.+++++ . .|++
T Consensus 321 ~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~-~~~p~~g~~~~s~---~~~d~~ 394 (543)
T 1nir_A 321 G-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR-GAN-FVHPKYGPVWSTS---HLGDGS 394 (543)
T ss_dssp E-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT-CEE-EEETTTEEEEEEE---BSSSSE
T ss_pred c-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC-Ccc-cCCCCCccEEEec---cCCCce
Confidence 4 667788999999999877655 589999999999998888774 5443 222 2567778888887 4 5799
Q ss_pred EEEEeCCCCCC----ceeEeeec-CCCceEEeEEeCCCCEEEEEE--e----CCCcEEEEEeeCCCceEEecc--c----
Q psy14130 290 VGLWDENDLNT----PLALETVD-SSSGVLFPYYDHDTRILFLAG--K----GDGNIRYYELTNERPYIHFLN--Q---- 352 (494)
Q Consensus 290 i~iwd~~~~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g--~----~dg~i~~wd~~~~~~~~~~~~--~---- 352 (494)
|.+||+.+... ...+..+. +..++..+.++|++++|++.. . .+++|.+||+.+++.....+. .
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~ 474 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 474 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCC
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhccc
Confidence 99999986211 11223333 346778899999999995543 1 277999999999886533321 1
Q ss_pred ccCCCCeeEEEEecCCceeeec-------cceeEEEEeeC
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ-------CEIFRFFKLHT 385 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~-------~~~~~~~~l~~ 385 (494)
..+...+..++|+|+|..+..+ ++.+.+|+..+
T Consensus 475 ~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 475 GEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp CSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 1235679999999999977632 58999999887
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.8e-20 Score=177.24 Aligned_cols=235 Identities=11% Similarity=0.130 Sum_probs=161.2
Q ss_pred CcEEEEEcC--CCCCCCCcccceEecccccccEEEEEEcCCCCCEEE-EEeCCCeEEEEECC---CCeEEEEecCCCCce
Q psy14130 149 HRVKLWYIP--DGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVA-SAGFDYLIILWDVG---KGEALTVIDCHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~--~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~-s~s~d~~v~iwd~~---~~~~~~~~~~h~~~v 222 (494)
+.|.+|++. ++.. ..+..+..+. .+.+++|+|++ +.|+ ++..++.|.+||+. ..+.+..+.. ...+
T Consensus 60 ~~v~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~ 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGAL-----TFAAESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGC 131 (343)
T ss_dssp TEEEEEEECTTTCCE-----EEEEEEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTB
T ss_pred CeEEEEEecCCCCce-----eeccccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccccccccccC-CCCc
Confidence 379999997 4421 2333444333 78899999998 5554 44558999999994 3445555554 3468
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEEeCCC-CceEE----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 223 NCLSFNRDGSRLVTTC-KDKTVRVLDPRT-GLVIS----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 223 ~~l~~~~~~~~l~s~~-~d~~v~iwd~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+++|+|+|++|++++ .++.|++||+.+ ++... ....+.+..+..++|+|++..+++++ ..++.|.+||+.
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~---~~~~~i~~~~~~ 208 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN---ELNSSVDVWELK 208 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE---TTTTEEEEEESS
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe---CCCCEEEEEEec
Confidence 9999999999888887 899999999987 65432 33444444477899999977788887 689999999996
Q ss_pred CCC-CceeEeee---c----CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 297 DLN-TPLALETV---D----SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 297 ~~~-~~~~~~~~---~----~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
... ........ . ....+..++|+|++++|++++..|+.|.+||+.........+........+.+++|+|++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence 421 11111111 1 123466799999999997888889999999998321112222223333448899999999
Q ss_pred ceeeec---cceeEEEEeeCCCCeEEEeE
Q psy14130 369 GCDVTQ---CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 369 ~~~~~~---~~~~~~~~l~~~~~~~~~~~ 394 (494)
..++.. ++.+++|++.......+.+.
T Consensus 289 ~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 289 KYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp SEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 855543 68999998875333444443
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=4.3e-20 Score=175.34 Aligned_cols=223 Identities=9% Similarity=0.068 Sum_probs=160.3
Q ss_pred cEEEEEcCCCCCCCCcccc-eEecccccccEEEEEEcCCCCCEEEEEeCCC---eEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEW-IMDLHGHKRRVGYIEWHPTAENVVASAGFDY---LIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
.|.+||+.++ +. ...+..+.....+++|+|++ ++|+++..++ .|.+||+.+++.+..+.. .....++
T Consensus 63 ~i~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~ 133 (331)
T 3u4y_A 63 TLVQIETQLE-------PPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGI 133 (331)
T ss_dssp EEEEEECSSS-------SCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEE
T ss_pred eEEEEECCCC-------ceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccce
Confidence 6999999887 33 45556566666569999998 6777555543 899999999998888774 4557999
Q ss_pred EEcCCCCEEEEE-eCCCe-EEEEeCCCCceEE----EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTT-CKDKT-VRVLDPRTGLVIS----QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~-~~d~~-v~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+|+|+|++|+++ ..++. |.+|++.....+. ..... +..+..++|+|++..+++++ ..++.|++||+.+..
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~---~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVAN---LIGNSIGILETQNPE 209 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEE---TTTTEEEEEECSSTT
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEe---CCCCeEEEEECCCCc
Confidence 999999855554 55578 9999988644321 11122 22378899999977788888 678999999998765
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc--eEEecccc-cCC---CCeeEEEEecCCceeee
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP--YIHFLNQS-LSG---APQRGLGFMPKRGCDVT 373 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~--~~~~~~~~-~~~---~~v~~~~~~p~~~~~~~ 373 (494)
.......+.....+..++|+|||++++++...++.|.+||+.+++. +..+.... ... ....+++|+|++..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 210 NITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred ccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 5222333445567788999999999978877889999999998865 22221110 011 12256899999986643
Q ss_pred -c--cceeEEEEeeC
Q psy14130 374 -Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 -~--~~~~~~~~l~~ 385 (494)
. ++.+++|++..
T Consensus 290 ~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 290 SANISRELKVFTISG 304 (331)
T ss_dssp EETTTTEEEEEETTS
T ss_pred ecCCCCcEEEEEecC
Confidence 2 56899999876
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=5.9e-20 Score=175.92 Aligned_cols=205 Identities=15% Similarity=0.104 Sum_probs=157.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---------cEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEecC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---------RVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---------~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~ 217 (494)
+.|.+||..++ +.+..+..+.. .+.+++|+|++. .++.++ .++.|.+||+.+++.+..+..
T Consensus 111 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 111 SAVTAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp TEEEEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEEEETTTTEEEEEECC
T ss_pred CEEEEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEEEcCCCCceEEEecC
Confidence 36999999887 33344433322 278999999984 555544 578999999999999888886
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee----cCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
+...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.. +... +..++|+|+++.+++++ ..++.|.+|
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~---~~~~~v~~~ 258 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHF-FINISLDTARQRAFITD---SKAAEVLVV 258 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCC-EEEEEEETTTTEEEEEE---SSSSEEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc-cceEEECCCCCEEEEEe---CCCCEEEEE
Confidence 667789999999999999999999999999999998877764 2223 66799999988888887 567999999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
|+.+........ ... ...++|+|+++.++++...++.|.+||..+++....+ .....+.+++|+|++..+..
T Consensus 259 d~~~~~~~~~~~---~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 259 DTRNGNILAKVA---APE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF----DTPTHPNSLALSADGKTLYV 330 (353)
T ss_dssp ETTTCCEEEEEE---CSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE----ECCSEEEEEEECTTSCEEEE
T ss_pred ECCCCcEEEEEE---cCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE----ecCCCCCeEEEcCCCCEEEE
Confidence 998755432222 222 3568999999998888888999999999988764332 23456899999999985443
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.1e-19 Score=192.06 Aligned_cols=217 Identities=10% Similarity=0.043 Sum_probs=152.8
Q ss_pred CCcEEEEEEcCcEEEEEcCCCCCCCCcccceEeccccccc----------------EEEEEEcCCCCCEEEEEeCCC---
Q psy14130 139 GGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR----------------VGYIEWHPTAENVVASAGFDY--- 199 (494)
Q Consensus 139 ~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~----------------V~~~~~~p~~~~~l~s~s~d~--- 199 (494)
+|..++....+.|.+||+.++ +.......+... +.+++|+|+| +.|++++.|+
T Consensus 162 DG~~la~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 162 KGGFVSFIRGRNLWVIDLASG-------RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPV 233 (741)
T ss_dssp TSSEEEEEETTEEEEEETTTT-------EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTS
T ss_pred CCCEEEEEeCCcEEEEecCCC-------CEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCC
Confidence 344455555668999999876 332222223322 4789999999 5777777665
Q ss_pred ------------------------------eEEEEECCC-CeEEEEec--CCCCceEEEEEcCCCCEEEEEeC-----CC
Q psy14130 200 ------------------------------LIILWDVGK-GEALTVID--CHPDVINCLSFNRDGSRLVTTCK-----DK 241 (494)
Q Consensus 200 ------------------------------~v~iwd~~~-~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~-----d~ 241 (494)
.|.+||+.+ ++...... .|...+.+++| |||+.|++++. +.
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~ 312 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKL 312 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeE
Confidence 889999988 77554433 47788999999 99999997764 57
Q ss_pred eEEEEeCCCCceEEEeeecCCC---CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEe-E
Q psy14130 242 TVRVLDPRTGLVISQGVCHPGT---RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFP-Y 317 (494)
Q Consensus 242 ~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~ 317 (494)
.|++||+.+++....+..+... .+..+.|+|++. +++++ +.++.++||.+...... .....+...+..+ .
T Consensus 313 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~---~~~g~~~l~~~~~~~~~--~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 313 DLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSS---ERTGFQHLYRIDSKGKA--AALTHGNWSVDELLA 386 (741)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEE---CTTSSCEEEEECSSSCE--EESCCSSSCEEEEEE
T ss_pred EEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEe---cCCCccEEEEEcCCCCe--eeeeecceEEEeEeE
Confidence 8999999999977777666532 145789999965 77777 67887788776522221 2222344567676 5
Q ss_pred EeCCCCEEEEEEeCCC--cEEEEEeeC-CCceEEecccccCCCCeeEEEEecCCceeeec
Q psy14130 318 YDHDTRILFLAGKGDG--NIRYYELTN-ERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg--~i~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
|+|+++.|+++++.|+ .+++|++.. ++.. ..+.. ...+..++|+|++..++..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~-~~l~~---~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQP-QRLSK---APGMHSASFARNASVYVDS 442 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCC-EECCC---SCSEEEEEECTTSSEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe-eeccc---CCCceEEEECCCCCEEEEE
Confidence 9999999977777777 899999985 4432 22322 4568899999999877764
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=2.4e-19 Score=170.79 Aligned_cols=211 Identities=12% Similarity=0.084 Sum_probs=140.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCC-CeEEE----EecC-CCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGK-GEALT----VIDC-HPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~-~~~~~----~~~~-h~~~ 221 (494)
+.|.+||+.++.. ......+..+ ..+.+++|+|++ +.|++++ .++.|.+||+.+ ++... .+.. ....
T Consensus 106 ~~i~~~d~~~~~~----~~~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 106 GNVSVTRLEDGLP----VGVVDVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAG 179 (343)
T ss_dssp TEEEEEEEETTEE----EEEEEEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCC
T ss_pred CeEEEEECCCCcc----ccccccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCC
Confidence 3699999952211 1333344433 458899999998 5666665 899999999987 54332 2232 3457
Q ss_pred eEEEEEcCCCCEEEEEe-CCCeEEEEeCCC--Cce--EEEeeec----C-CCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 222 INCLSFNRDGSRLVTTC-KDKTVRVLDPRT--GLV--ISQGVCH----P-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~--~~~--~~~~~~~----~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
+.+++|+|+|++++.++ .++.|.+||+.. ++. ....... . ...+..++|+|++..+++++ ..++.|.
T Consensus 180 ~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~---~~~~~i~ 256 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD---RTASLIT 256 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE---TTTTEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe---cCCCEEE
Confidence 88999999999776555 789999999953 442 2222211 1 11255799999977787777 6799999
Q ss_pred EEeCCCC-CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 292 LWDENDL-NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 292 iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+||+... ..............+..++|+|++++|++++..++.|.+|++.........+.....+....+++|.|+.
T Consensus 257 v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 257 VFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC
T ss_pred EEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEccc
Confidence 9999731 1222233333344588899999999997776689999999776432112333344444567788888754
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=2.2e-19 Score=181.58 Aligned_cols=221 Identities=11% Similarity=0.051 Sum_probs=174.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC--CCCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~l~ 226 (494)
++|.+||..++ +.+.++..+.. +.+++|+|+| ++|++++.|++|++||+ .+++.+.++. +...+.+++
T Consensus 159 ~~V~v~D~~t~-------~~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va 228 (543)
T 1nir_A 159 GQIALVDGDSK-------KIVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVE 228 (543)
T ss_dssp TEEEEEETTTC-------CEEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEE
T ss_pred CeEEEEECCCc-------eEEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEE
Confidence 36999999988 55666663323 8899999998 79999999999999999 8899888888 556789999
Q ss_pred EcC----CCCEEEEEe-CCCeEEEEeCCCCceEEEeee----------cCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 227 FNR----DGSRLVTTC-KDKTVRVLDPRTGLVISQGVC----------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 227 ~~~----~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
|+| ||++|++++ .+++|.+||..+++++..+.. |....+..+.++++++.++++. ..++.|.
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~---~~~g~i~ 305 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV---KETGKVL 305 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE---CCCCeEE
Confidence 999 999999988 489999999999998888765 3343578899999888888888 7899999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEE-EecC-C
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLG-FMPK-R 368 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~-~~p~-~ 368 (494)
+||+.+..... ...+.+...+..+.|+|+++++++++..+++|.+||+.+++....+-.. ..+.. +++. ++|+ +
T Consensus 306 vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g--~g~~~~~p~~g 382 (543)
T 1nir_A 306 LVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG--RGANFVHPKYG 382 (543)
T ss_dssp EEECTTSSSCE-EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCT--TCEEEEETTTE
T ss_pred EEEecCCCcce-eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCC--CCcccCCCCCc
Confidence 99998755433 2334455678889999999999788888999999999999864433211 11222 2333 4687 6
Q ss_pred ceeeec---cceeEEEEeeC
Q psy14130 369 GCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~---~~~~~~~~l~~ 385 (494)
.+++++ ++.+++|++.+
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeccCCCceEEEEEeCC
Confidence 666663 68999999876
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.1e-19 Score=178.29 Aligned_cols=197 Identities=11% Similarity=0.062 Sum_probs=145.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEE-EEeCCCe--EEEEECCCCeEEEEecCCCCceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVA-SAGFDYL--IILWDVGKGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~-s~s~d~~--v~iwd~~~~~~~~~~~~h~~~v~~l~ 226 (494)
.|++||+.++ +. ..+..|...+.+++|+|+| +.|+ +++.|+. |++||+.+++. ..+..|...+.+++
T Consensus 204 ~i~~~d~~tg-------~~-~~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 273 (415)
T 2hqs_A 204 ALVIQTLANG-------AV-RQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPT 273 (415)
T ss_dssp EEEEEETTTC-------CE-EEEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEE
T ss_pred EEEEEECCCC-------cE-EEeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceE
Confidence 6999999887 33 3466788899999999999 4555 7777664 99999988775 56777889999999
Q ss_pred EcCCCCEEEEEeC-CC--eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 227 FNRDGSRLVTTCK-DK--TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 227 ~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
|+|||+.|++++. ++ .|.+||+.+++. ..+..+... +..+.|+|++..+++++. ...+..|++||+.+... ..
T Consensus 274 ~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~spdG~~l~~~~~-~~g~~~i~~~d~~~~~~-~~ 349 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQ-NQDADVSSDGKFMVMVSS-NGGQQHIAKQDLATGGV-QV 349 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSE-EEEEEECTTSSEEEEEEE-CSSCEEEEEEETTTCCE-EE
T ss_pred ECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCc-ccCeEECCCCCEEEEEEC-cCCceEEEEEECCCCCE-EE
Confidence 9999999998886 44 688889988774 344445444 778999999776766661 11146899999987543 21
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCC---cEEEEEeeCCCceEEecccccCCCCeeEEEEecCC
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDG---NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+.....+..++|+|+|+.| ++++.|+ .|++||+..+. ...+.. +...|++++|+|.-
T Consensus 350 ---l~~~~~~~~~~~spdg~~l-~~~s~~~~~~~l~~~d~~g~~--~~~l~~--~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 ---LSSTFLDETPSLAPNGTMV-IYSSSQGMGSVLNLVSTDGRF--KARLPA--TDGQVKFPAWSPYL 409 (415)
T ss_dssp ---CCCSSSCEEEEECTTSSEE-EEEEEETTEEEEEEEETTSCC--EEECCC--SSSEEEEEEECCCC
T ss_pred ---ecCCCCcCCeEEcCCCCEE-EEEEcCCCccEEEEEECCCCc--EEEeeC--CCCCCcCCcccccc
Confidence 2222478899999999999 4454555 79999987554 233332 35679999999974
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=2.3e-19 Score=170.35 Aligned_cols=223 Identities=12% Similarity=0.036 Sum_probs=166.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||+.++ +....+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...+..+..+..+++|
T Consensus 20 ~~v~~~d~~~~-------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 20 RRISFFSTDTL-------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp TEEEEEETTTC-------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred CeEEEEeCccc-------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 36999999988 4444555556667 9999999843455555589999999999887 7777766666666999
Q ss_pred cCCCCEEEEEeCCC---eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce-EEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDK---TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ-VGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~-i~iwd~~~~~~~~~ 303 (494)
+|+|++|+++..++ .|.+||+.+++.+..+..+.. ...++|+|++..+++++ ..++. |.+|++........
T Consensus 92 s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~---~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 92 TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD--AVGIAISPNGNGLILID---RSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT--EEEEEECTTSSCEEEEE---ETTTTEEEEEEECTTCCEEE
T ss_pred CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC--ccceEECCCCCEEEEEe---cCCCceEEEEEECCCCcEee
Confidence 99999999555553 899999999998887765443 68999999987788887 46677 99999875433221
Q ss_pred --EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee-eec--ccee
Q psy14130 304 --LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD-VTQ--CEIF 378 (494)
Q Consensus 304 --~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~--~~~~ 378 (494)
.........+..++|+|+|+++++++..++.|++||+.+++.. ..+........+.+++|+|++..+ ++. ++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i 245 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDV 245 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEECSSCCCCEEECTTSSEEEEECSSEEEE
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccCCCCCceEEECCCCCEEEEEEcCCCEE
Confidence 1222344568899999999998888888999999999988761 111222234667899999999854 332 6678
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.+|++.+
T Consensus 246 ~~~d~~~ 252 (331)
T 3u4y_A 246 FNFNQLS 252 (331)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888776
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=1.4e-18 Score=166.11 Aligned_cols=236 Identities=14% Similarity=0.181 Sum_probs=162.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCC-C--eEEEEecC-------
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGK-G--EALTVIDC------- 217 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~-~--~~~~~~~~------- 217 (494)
+.|.+|++.++.. +.+..+..+...+..++|+|+| ++|++++ .++.|.+||+.. + +.+..+..
T Consensus 63 ~~v~~~~~~~g~~-----~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTA-----HKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEE-----EEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcE-----EEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 4799999976532 2344555677888999999999 5666666 789999999963 2 33333332
Q ss_pred --CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceE--EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 218 --HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR-TGLVI--SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 218 --h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
+...+.+++|+|+|+++++...++.|++||+. +++.. ..+..+.+..+..++|+|++..+++++ ..++.|.+
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~---~~~~~v~v 213 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG---ELSSQIAS 213 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE---TTTTEEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe---CCCCEEEE
Confidence 12348899999999966666678999999998 55532 223344443477899999977788887 68899999
Q ss_pred EeCCCCCCce-eEeee---cC----CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEE
Q psy14130 293 WDENDLNTPL-ALETV---DS----SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLG 363 (494)
Q Consensus 293 wd~~~~~~~~-~~~~~---~~----~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~ 363 (494)
|++....... ..... .. ...+..++|+|||++|++++..++.|.+|++..... ...+.... ....+.+++
T Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 214 LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH-LTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-EEEEEEEECSSSCCCEEE
T ss_pred EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-EEEeEEEecCCCCcCeEE
Confidence 9987421111 11111 11 145788999999999988888899999999974321 22222222 244588999
Q ss_pred EecCCceeeec---cceeEEEEeeCCCCeEEEeE
Q psy14130 364 FMPKRGCDVTQ---CEIFRFFKLHTTRNMCEPIS 394 (494)
Q Consensus 364 ~~p~~~~~~~~---~~~~~~~~l~~~~~~~~~~~ 394 (494)
|+|++..++.. ++.+.+|++......+..+.
T Consensus 293 ~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 293 LDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 99999865543 57899998875334555554
No 138
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=1.8e-19 Score=177.34 Aligned_cols=189 Identities=13% Similarity=0.101 Sum_probs=134.9
Q ss_pred CcEEEEEcCCC-----CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDG-----GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~-----~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~ 223 (494)
+.|+|||+.+. ..... ......+.+|...|.+++|+|+..++|++++.||+|++||++++..+....+|...|+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRP-FAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCC-SEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred ceEEEEEccccccCCcCCcce-eeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 36999998654 11000 1234567789999999999998548999999999999999999887777778999999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC------CCceEEEEECCCCeEEEEEecCCCC------ceEE
Q psy14130 224 CLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG------TRSSKAVFIGDTGRIVTTGFSRHSD------RQVG 291 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~g~~~~~d------~~i~ 291 (494)
+++|+|+|++|++|+.||+|++||++ ++....+..|.. ..+..+.|+++...+++.+ ..+ ..++
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~---~~dg~~~~~~~v~ 272 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA---AADGTLETSPDVV 272 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE---ETTCCSSSCCEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc---cCCCccCCCCceE
Confidence 99999999999999999999999999 666666655432 1478899998744343333 233 2499
Q ss_pred EEeCCCCCC--ceeEeee-cC-------CCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 292 LWDENDLNT--PLALETV-DS-------SSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 292 iwd~~~~~~--~~~~~~~-~~-------~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+||+++... +...... +. ......+.+-++.+.++++.+..+.|.+.....
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 999986432 2222211 11 111223344478888888877777788877543
No 139
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=2e-17 Score=159.10 Aligned_cols=211 Identities=11% Similarity=0.075 Sum_probs=137.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEec--------ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-------E--
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL--------HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-------A-- 211 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~--------~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-------~-- 211 (494)
+.|.+|++...+........ ... ..+...+.+++|+|+|..+++++..++.|.+|++.... .
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDV-IEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEE-EECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CEEEEEEeCCCCcCccccee-EEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee
Confidence 36999999765433222111 111 11234468899999994355555568999999987533 1
Q ss_pred ----EEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCce--EEEeeecCC--CCceEEEEECCCCeEEEEEe
Q psy14130 212 ----LTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLV--ISQGVCHPG--TRSSKAVFIGDTGRIVTTGF 282 (494)
Q Consensus 212 ----~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~ 282 (494)
......+...+.+++|+|+|+++++++ .++.|.+||+.+++. +..+..... .....++|+|++..++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~- 277 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN- 277 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-
Confidence 112223456788999999999888777 689999999987764 233322211 2256899999977777777
Q ss_pred cCCC-CceEEEEeCCCC-CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee--CCCceEEecccccCCCC
Q psy14130 283 SRHS-DRQVGLWDENDL-NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT--NERPYIHFLNQSLSGAP 358 (494)
Q Consensus 283 ~~~~-d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~ 358 (494)
.. ++.|.+|++... ..............+..++|+|||++|++++..++.|.+|++. +++ ...+........
T Consensus 278 --~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~--~~~~~~~~~~~~ 353 (361)
T 3scy_A 278 --RLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL--LTDIKKDIKVDK 353 (361)
T ss_dssp --CSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC--EEECSCCEECSS
T ss_pred --CCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc--EeecceeeeCCC
Confidence 45 689999998621 2222233333345678899999999997777688999998765 444 333332222345
Q ss_pred eeEEEEe
Q psy14130 359 QRGLGFM 365 (494)
Q Consensus 359 v~~~~~~ 365 (494)
+.+++|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 7888886
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=2e-18 Score=181.86 Aligned_cols=219 Identities=10% Similarity=0.036 Sum_probs=146.1
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccc------------------cEEEEEEcCCCCCEEEEEeCCC----
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR------------------RVGYIEWHPTAENVVASAGFDY---- 199 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~------------------~V~~~~~~p~~~~~l~s~s~d~---- 199 (494)
.++....++|.+|++.++. .......+.. .+.+++|+|+| +.|++++.|+
T Consensus 127 ~la~~~~~~i~~~~~~~g~-------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~ 198 (723)
T 1xfd_A 127 QLIFIFENNIYYCAHVGKQ-------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVP 198 (723)
T ss_dssp CEEEEETTEEEEESSSSSC-------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSC
T ss_pred EEEEEECCeEEEEECCCCc-------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccc
Confidence 3333444579999998873 3333333332 23789999999 6888877543
Q ss_pred ------------------------------eEEEEECCCCeEEEEecCC------CCceEEEEEcCCCCEEEEEeC----
Q psy14130 200 ------------------------------LIILWDVGKGEALTVIDCH------PDVINCLSFNRDGSRLVTTCK---- 239 (494)
Q Consensus 200 ------------------------------~v~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~l~s~~~---- 239 (494)
.|++||+.+++....+..+ ...+.+++|+|||++|++.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 278 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQN 278 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSC
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCC
Confidence 8999999988765666654 567899999999998877653
Q ss_pred CCeEEEEeCCCCceEEEeeecCCCCc----eEEEEECCCCeEEEE-EecCCCCc------eEEEEeC-CCCCC--ceeEe
Q psy14130 240 DKTVRVLDPRTGLVISQGVCHPGTRS----SKAVFIGDTGRIVTT-GFSRHSDR------QVGLWDE-NDLNT--PLALE 305 (494)
Q Consensus 240 d~~v~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~-g~~~~~d~------~i~iwd~-~~~~~--~~~~~ 305 (494)
+..|++||+.++++...+..+....+ ..+.|+|++..++.+ + ..++ .|.+||+ ..... ...+.
T Consensus 279 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~ 355 (723)
T 1xfd_A 279 VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA---IPQGGRGKFYHITVSSSQPNSSNDNIQSIT 355 (723)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE---ECCSSSSCEEEEEEECSSCCSSSCCCCBSC
T ss_pred eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe---cccCCCcceeEEEEEeccCCCCccceeEee
Confidence 36799999999987666554332212 367999998877775 4 3555 5777773 33220 22221
Q ss_pred eecCCCceEE-eEEeCCCCEEEEEEeCC--CcEEEEEeeCCCc-eEEeccc-ccCCCCeeEEEEecCCceeee
Q psy14130 306 TVDSSSGVLF-PYYDHDTRILFLAGKGD--GNIRYYELTNERP-YIHFLNQ-SLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 306 ~~~~~~~v~~-~~~~~~~~~l~~~g~~d--g~i~~wd~~~~~~-~~~~~~~-~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+...+.. ++|+|||+.|+.++..+ +.+++|++..... ....+.. ..+...+..++|+|++..++.
T Consensus 356 --~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 356 --SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp --CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred --cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 12334444 68999999996666666 8899999975421 1111221 113456889999999987765
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.7e-18 Score=160.93 Aligned_cols=216 Identities=11% Similarity=0.054 Sum_probs=157.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC-CCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH-PDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h-~~~v~~l~~ 227 (494)
+|++||+.++ +. ..+..|...|.+++|+|++ ++|++++ ++.|++||+.+ ++.......+ ...+.+++|
T Consensus 23 ~i~~~d~~~~-------~~-~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 23 SIEIFNIRTR-------KM-RVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp EEEEEETTTT-------EE-EEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred eEEEEeCCCC-------ce-eeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 6999999876 33 3455689999999999998 6888877 78999999998 8777666555 478899999
Q ss_pred cCCCCEEEEEeC--C--CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCK--D--KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~--d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+|++|++++. + ..|..||+.+++ ...+..+. . +..+.|+|++..++.++ ..++.++||++.......
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~-~~~~~~spdg~~l~~~~---~~~~~~~l~~~~~~~~~~- 165 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-P-SYWHGWSPDGKSFTYCG---IRDQVFDIYSMDIDSGVE- 165 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-S-EEEEEECTTSSEEEEEE---EETTEEEEEEEETTTCCE-
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-C-ccceEECCCCCEEEEEE---CCCCceEEEEEECCCCcc-
Confidence 999999999993 3 445555555555 33444333 2 67889999977777666 578999999864322211
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeEEEEecCCceeeec--c-----
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--C----- 375 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~----- 375 (494)
.....+...+.++.|+|+++.|++++..|+.+++|++. .+... ..+.. +...+..++|+|++..++.. +
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV-ERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE-EECCC--CSEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc-EEEec--CCcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 22233556789999999999996666679999999998 34433 33332 23568899999999877664 2
Q ss_pred ------ceeEEEEeeC
Q psy14130 376 ------EIFRFFKLHT 385 (494)
Q Consensus 376 ------~~~~~~~l~~ 385 (494)
..+.+|++..
T Consensus 243 ~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDG 258 (297)
T ss_dssp CCSSEEEEEEEEETTS
T ss_pred ccccCceEEEEEecCC
Confidence 3477888766
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=3.7e-18 Score=179.36 Aligned_cols=196 Identities=10% Similarity=0.130 Sum_probs=138.3
Q ss_pred EEEEEEcCCCCCEEEEEe---------------------------------CCCeEEEEECCCCeEEEEec--CCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAG---------------------------------FDYLIILWDVGKGEALTVID--CHPDVIN 223 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s---------------------------------~d~~v~iwd~~~~~~~~~~~--~h~~~v~ 223 (494)
+.+++|+|+| +.|++++ .+..|++||+.+++...... .|...+.
T Consensus 183 ~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 183 EKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 5899999999 6888887 45789999999887654442 4677899
Q ss_pred EEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceEEEee-ecCCC---CceEEEEEC--CCCeEEEEEecCCCCceEEE
Q psy14130 224 CLSFNRDGSRLVTTCKDK-----TVRVLDPRTGLVISQGV-CHPGT---RSSKAVFIG--DTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~~~~~---~~~~~~~~~--~~~~l~~~g~~~~~d~~i~i 292 (494)
+++|+|||+.|++++.++ .|++||+.+++....+. .+... .+..+.|+| + +.+++++ ..++.++|
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d-g~~l~~~---~~~g~~~l 337 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN-NQFIWQS---RRDGWNHL 337 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS-SEEEEEE---CTTSSCEE
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC-CEEEEEE---ccCCccEE
Confidence 999999999999988776 99999999984333332 22211 135678999 7 5577777 67888999
Q ss_pred EeCCCCCCceeEeeecCCCceEE-eEEeCCCCEEEEEEeCCC----cEEEEEeeCCCceEEecccccCCCCeeEEEEecC
Q psy14130 293 WDENDLNTPLALETVDSSSGVLF-PYYDHDTRILFLAGKGDG----NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPK 367 (494)
Q Consensus 293 wd~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~g~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 367 (494)
|++........ ....+...+.. ++|+|+++.|++++..++ .|..||+.+++. ..+. +...+.+++|+|+
T Consensus 338 ~~~~~~~~~~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~--~~l~---~~~~~~~~~~spd 411 (706)
T 2z3z_A 338 YLYDTTGRLIR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT--KDLT---PESGMHRTQLSPD 411 (706)
T ss_dssp EEEETTSCEEE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC--EESC---CSSSEEEEEECTT
T ss_pred EEEECCCCEEE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc--eecc---CCCceEEEEECCC
Confidence 98752122111 11223445655 799999999977777766 566666666552 2222 3456899999999
Q ss_pred Cceeeec--c----ceeEEEEeeC
Q psy14130 368 RGCDVTQ--C----EIFRFFKLHT 385 (494)
Q Consensus 368 ~~~~~~~--~----~~~~~~~l~~ 385 (494)
+..++.. + ..+.+|++..
T Consensus 412 g~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 412 GSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp SSEEEEEEECSSCSCEEEEEESSS
T ss_pred CCEEEEEecCCCCCcEEEEEECCC
Confidence 9877653 2 4588998876
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=3.6e-19 Score=175.24 Aligned_cols=162 Identities=12% Similarity=0.107 Sum_probs=127.7
Q ss_pred ccccEEEEEEcCCCCCEEE----EEeCCCeEEEEECCCC--------e---EEEEecCCCCceEEEEEcCC-CCEEEEEe
Q psy14130 175 HKRRVGYIEWHPTAENVVA----SAGFDYLIILWDVGKG--------E---ALTVIDCHPDVINCLSFNRD-GSRLVTTC 238 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~----s~s~d~~v~iwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~-~~~l~s~~ 238 (494)
|...|.+++|+|++ ++|+ +|+.|++|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++
T Consensus 91 ~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 91 MKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred CCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 66789999999998 6888 8889999999998654 2 24556779999999999997 88999999
Q ss_pred CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-----cCCCce
Q psy14130 239 KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-----DSSSGV 313 (494)
Q Consensus 239 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v 313 (494)
.||+|++||++++..+.....|... +.+++|+|++. ++++| +.|+.|++||++ ......+... ++...+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~-v~~v~wspdg~-~lasg---s~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVA-VTSVCWSPKGK-QLAVG---KQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGC-EEEEEECTTSS-CEEEE---ETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCc-eeEEEEcCCCC-EEEEE---cCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence 9999999999999777666777766 99999999954 55555 489999999998 2222111111 112378
Q ss_pred EEeEEeCCCCEEEEEEeCCCc------EEEEEeeCC
Q psy14130 314 LFPYYDHDTRILFLAGKGDGN------IRYYELTNE 343 (494)
Q Consensus 314 ~~~~~~~~~~~l~~~g~~dg~------i~~wd~~~~ 343 (494)
.++.|++++.++++.+..||. +++|+++..
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 999999998888666767654 899999865
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=8.8e-19 Score=179.84 Aligned_cols=185 Identities=11% Similarity=-0.008 Sum_probs=132.3
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD----KTVRVLDPRTGLVI 254 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~ 254 (494)
+...+|+|++..++++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.| +.|++||+.+++..
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3356788887555555444555669999988766555433 3 889999999999988877 78999999988854
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCceeEeeecCCCceEEeE--------EeCCCCE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLALETVDSSSGVLFPY--------YDHDTRI 324 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~ 324 (494)
.+..|... +...+|+|++..++ ++ ..++ .|++||+.+.... ....+...+..+. |+||| .
T Consensus 189 -~l~~~~~~-~~~~~~SpDG~~l~-~~---~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~ 258 (582)
T 3o4h_A 189 -VFDSGEGS-FSSASISPGMKVTA-GL---ETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-R 258 (582)
T ss_dssp -EECCSSCE-EEEEEECTTSCEEE-EE---ECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-C
T ss_pred -EeecCCCc-cccceECCCCCEEE-Ec---cCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-c
Confidence 56667665 78999999966666 44 4677 8999999875432 2223344555666 99999 5
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
++++++.|+.+++|++ ++... .....+.+++|+ ++.++++. ....++|.+..
T Consensus 259 ~~~~~~~~g~~~l~~~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 259 LAVVARREGRSAVFID--GERVE------APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEEEETTEEEEEET--TEEEC------CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred EEEEEEcCCcEEEEEE--CCeec------cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 5588999999999999 54321 123568899999 88877653 33355665554
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=1e-17 Score=160.21 Aligned_cols=220 Identities=12% Similarity=0.008 Sum_probs=165.3
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCc------
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDV------ 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~------ 221 (494)
.+.|.+||..++ +.+..+. ....+.+++|+|++..+++++..++.|.+||+.+++.+..+..+...
T Consensus 68 ~~~v~~~d~~~~-------~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTL-------EVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTC-------CEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred CccEEEEcCCCC-------eEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 347999999887 4444443 23457789999998546677777899999999999988888754432
Q ss_pred ---eEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 222 ---INCLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 222 ---v~~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
+.+++|+|+|+++++++ .++.|.+||+.+++.+..+..+... +..+.|+|+++.++++. .++.|.+||+.
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~----~~~~i~~~d~~ 214 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM-STGLALDSEGKRLYTTN----ADGELITIDTA 214 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT-CCCCEEETTTTEEEEEC----TTSEEEEEETT
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc-cceEEECCCCCEEEEEc----CCCeEEEEECC
Confidence 78999999999888776 4789999999999988887744443 68889999977666665 68999999998
Q ss_pred CCCCceeEeee--cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce-eee
Q psy14130 297 DLNTPLALETV--DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC-DVT 373 (494)
Q Consensus 297 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~ 373 (494)
+.......... .+...+..++|+|+++.++++...++.|.+||+.+++....... .. ..+++|+|++.. +++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----~~-~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 215 DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA----PE-SLAVLFNPARNEAYVT 289 (353)
T ss_dssp TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC----SS-CCCEEEETTTTEEEEE
T ss_pred CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc----CC-CceEEECCCCCEEEEE
Confidence 75433222211 12345677999999999988887789999999999886443321 22 367999999984 444
Q ss_pred c--cceeEEEEeeC
Q psy14130 374 Q--CEIFRFFKLHT 385 (494)
Q Consensus 374 ~--~~~~~~~~l~~ 385 (494)
. ++.+.+|++.+
T Consensus 290 ~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 290 HRQAGKVSVIDAKS 303 (353)
T ss_dssp ETTTTEEEEEETTT
T ss_pred ECCCCeEEEEECCC
Confidence 3 78899999876
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=4.4e-18 Score=161.50 Aligned_cols=212 Identities=12% Similarity=0.058 Sum_probs=155.1
Q ss_pred cEEEEEcCCCCCCCCcccceEeccc-----ccccEEEEEEcCCCCCEEEEEe------------CCCeEEEEECCCCeEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHG-----HKRRVGYIEWHPTAENVVASAG------------FDYLIILWDVGKGEAL 212 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~p~~~~~l~s~s------------~d~~v~iwd~~~~~~~ 212 (494)
.|.+||+.+++ .+..+.. |...+.+++|+|++ +.|++++ .++.|.+||+.+++.+
T Consensus 57 ~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 57 SLVKIDLVTGE-------TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EEEEEETTTCC-------EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred eEEEEECCCCC-------eEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 69999998873 3333321 22357789999998 5777775 5799999999999888
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc----
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---- 288 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---- 288 (494)
..+.. ...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+..+... ....|+|++..+++++ ..++
T Consensus 129 ~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~---~~~~~~~~ 200 (337)
T 1pby_B 129 KAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE--AETYAQPDVLAVWNQH---ESSGVMAT 200 (337)
T ss_dssp EEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT--TTTBCCCBCCCCCCCC---TTTTEEEE
T ss_pred EEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC--CCceeCCCccEEeeec---cCCCceee
Confidence 77764 5568889999999988888 688999999999987777655422 1236778766565544 2333
Q ss_pred -------------------eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 289 -------------------QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 289 -------------------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
.|.+||+.+.... ......+...+..++|+|++++++++ ++.|++||+.+++....+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCccee
Confidence 5789999876543 33223344567889999999999554 789999999988754332
Q ss_pred cccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
. ....+.+++|+|++..++. .++.+++|++.+
T Consensus 277 ~----~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 277 P----LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp E----CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred c----CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 2 2356789999999986554 378899999877
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=1.1e-17 Score=155.43 Aligned_cols=155 Identities=10% Similarity=0.074 Sum_probs=113.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPR-TGLVI 254 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~-~~~~~ 254 (494)
.+.+++|+|++..++++++.|+.+++|++.. +.....+..|...+.+++|+|+|+.|+.++ .++.+++|++. .+..+
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 209 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence 4899999999954445888899999998632 334456677888999999999999888766 58999999886 45566
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCC-------CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-------SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
..+..|... +..+.|+|++..+++++.... .++.|.+||+.+...........+...+..+.|+|+++.|++
T Consensus 210 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 210 ERITDSAYG-DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EECCCCSEE-EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred EEEecCCcc-cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 677666654 788999999777776662110 126799999987654333332345667888999999999956
Q ss_pred EEeCCC
Q psy14130 328 AGKGDG 333 (494)
Q Consensus 328 ~g~~dg 333 (494)
++..++
T Consensus 289 ~~~~~~ 294 (297)
T 2ojh_A 289 VRYFPV 294 (297)
T ss_dssp EEECCC
T ss_pred EEeccC
Confidence 555443
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=1e-17 Score=183.35 Aligned_cols=216 Identities=10% Similarity=0.044 Sum_probs=159.1
Q ss_pred cEE-EEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVK-LWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~-iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.+. +|++.++ .. ..+.+|...+.+++|+|+| +.|++++.++.|++||+.+++....+.+|.+.+.+++|+
T Consensus 359 ~l~~~~d~~~~-------~~-~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 359 DFLGIYDYRTG-------KA-EKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEETTTC-------CE-EECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred ceEEEEECCCC-------Cc-eEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 466 7788765 22 3344788899999999998 799999999999999999998888887899999999999
Q ss_pred CCCCEEEEEeCCC----------eEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCC
Q psy14130 229 RDGSRLVTTCKDK----------TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDL 298 (494)
Q Consensus 229 ~~~~~l~s~~~d~----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~ 298 (494)
|||++|++++.++ .|++||+.+++ +..+..|... +..+.|+|++..+++.+ .++...+|+....
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~-~~~~~~spdG~~l~~~s----~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH-DYAPAFDADSKNLYYLS----YRSLDPSPDRVVL 503 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB-EEEEEECTTSCEEEEEE----SCCCCCEECSSSS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc-cCCceEcCCCCEEEEEe----cccCCcCcchhcc
Confidence 9999999887654 89999999887 6667677655 77889999977777665 5555555653221
Q ss_pred CC-------------------c---------------------eeEeee-cCCCceEEeEEeCCCCEEEE----------
Q psy14130 299 NT-------------------P---------------------LALETV-DSSSGVLFPYYDHDTRILFL---------- 327 (494)
Q Consensus 299 ~~-------------------~---------------------~~~~~~-~~~~~v~~~~~~~~~~~l~~---------- 327 (494)
.. + .....+ .+...+..+.++||++.+++
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~ 583 (1045)
T 1k32_A 504 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 583 (1045)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHH
T ss_pred ccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccc
Confidence 10 0 001111 13356778999999987743
Q ss_pred --EEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeCCC
Q psy14130 328 --AGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHTTR 387 (494)
Q Consensus 328 --~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~~~ 387 (494)
+...+..|.+||+.+++. ..+. ..+.+++|+|||..+++. ++.+++|++.+.+
T Consensus 584 ~~~~~~~~~l~~~d~~~~~~-~~l~------~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 584 YQGAPEKGVLLKYDVKTRKV-TEVK------NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp HHCCCCCEEEEEEETTTCCE-EEEE------EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred ccccCCCceEEEEECCCCcE-EEee------cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 122355788888888764 2222 458899999999877664 5689999998743
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=1.9e-16 Score=173.41 Aligned_cols=184 Identities=10% Similarity=0.022 Sum_probs=140.7
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccc-cEEEEEEcCCCCCEEEEEeCCCeEE-EEECCCCeEEEEecCCC
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKR-RVGYIEWHPTAENVVASAGFDYLII-LWDVGKGEALTVIDCHP 219 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~-iwd~~~~~~~~~~~~h~ 219 (494)
.+++...+.|.+|++.++ . ...+..|.. .+.+++|+ +| ..|++++.+..+. +||+.+++.. .+.+|.
T Consensus 310 ~la~~~~~~i~~~~~~~~-------~-~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~ 378 (1045)
T 1k32_A 310 LIAFVSRGQAFIQDVSGT-------Y-VLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAE-KFEENL 378 (1045)
T ss_dssp CEEEEETTEEEEECTTSS-------B-EEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEE-ECCCCC
T ss_pred EEEEEEcCEEEEEcCCCC-------c-eEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCce-EecCCc
Confidence 344444567999998765 2 234566777 89999999 87 6888888888898 9999877654 444788
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecC------CCCceEEEE
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR------HSDRQVGLW 293 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~------~~d~~i~iw 293 (494)
..+.+++|+|||++|++++.++.|++||+.+++.......|... +..++|+|++..+++++... ..++.|++|
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-ccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 99999999999999999999999999999999987777677776 78999999977776666211 123599999
Q ss_pred eCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEee
Q psy14130 294 DENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 294 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
|+.+.. . .....+...+..++|+|||+.| +.++.++...+|+..
T Consensus 458 d~~~g~-~--~~l~~~~~~~~~~~~spdG~~l-~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 458 DMEGRK-I--FAATTENSHDYAPAFDADSKNL-YYLSYRSLDPSPDRV 501 (1045)
T ss_dssp ETTTTE-E--EECSCSSSBEEEEEECTTSCEE-EEEESCCCCCEECSS
T ss_pred ECCCCc-E--EEeeCCCcccCCceEcCCCCEE-EEEecccCCcCcchh
Confidence 998743 2 2223355668889999999999 566677766666643
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=2.7e-17 Score=173.75 Aligned_cols=202 Identities=10% Similarity=0.128 Sum_probs=144.4
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 255 (494)
.|.+++|+|+| +.|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++...
T Consensus 110 ~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 37899999999 68888876 999999998873 3455677888999999999999999987 4699999999887655
Q ss_pred EeeecCCC---------------CceEEEEECCCCeEEEEEecCC-----------------------------CCceEE
Q psy14130 256 QGVCHPGT---------------RSSKAVFIGDTGRIVTTGFSRH-----------------------------SDRQVG 291 (494)
Q Consensus 256 ~~~~~~~~---------------~~~~~~~~~~~~~l~~~g~~~~-----------------------------~d~~i~ 291 (494)
....+... .+..+.|+|++..|+++..... ....|.
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 44433321 1367899999877777762110 001788
Q ss_pred EEeCCC-CCCceeEeee-cCCCceEEeEEeCCCCEEEEEEe----CCCcEEEEEeeCCCceEEecccccCC--CCeeEEE
Q psy14130 292 LWDEND-LNTPLALETV-DSSSGVLFPYYDHDTRILFLAGK----GDGNIRYYELTNERPYIHFLNQSLSG--APQRGLG 363 (494)
Q Consensus 292 iwd~~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~----~dg~i~~wd~~~~~~~~~~~~~~~~~--~~v~~~~ 363 (494)
+||+.+ .... .+... .+...+..++| |||+.|++++. .+..|++||+.+++... .+...... ..+.+++
T Consensus 267 ~~d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 267 VISPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV-LAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EECSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE-EEEEECSSCCCCCSCCE
T ss_pred EEECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE-EEEcCCCCcCCcCCceE
Confidence 999876 5432 22111 24567889999 99999955543 35779999999987532 22222111 1457899
Q ss_pred EecCCceeeec--cceeEEEEeeC
Q psy14130 364 FMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 364 ~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|+|++.+++++ ++..++|.+..
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECS
T ss_pred ECCCCeEEEEecCCCccEEEEEcC
Confidence 99999876664 67789998874
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=2.1e-16 Score=151.05 Aligned_cols=208 Identities=10% Similarity=0.103 Sum_probs=146.1
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCe--EEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGE--ALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLD 247 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd 247 (494)
..+...+..++|+|+| ++++++.. ++.|.+||+.+++ .+..+..+...+..++|+|+|++|++++ .++.|++||
T Consensus 36 ~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3455677889999998 45544432 6899999997776 4445455778899999999999998888 789999999
Q ss_pred CC-CCc--eEEEeeecC--------CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe--eecCCCceE
Q psy14130 248 PR-TGL--VISQGVCHP--------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE--TVDSSSGVL 314 (494)
Q Consensus 248 ~~-~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~v~ 314 (494)
+. ++. .+..+.... ...+..++|+|++. +++++ ..++.|++||+.......... .......+.
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID---LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR 190 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE---TTTTEEEEEEECTTSCEEEEEEEECCTTCCEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe---CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc
Confidence 96 333 233332211 11266799999966 88888 678999999998322222222 222334678
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeC--CCceE-EecccccC----CCCeeEEEEecCCcee-eec--cceeEEEEee
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTN--ERPYI-HFLNQSLS----GAPQRGLGFMPKRGCD-VTQ--CEIFRFFKLH 384 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~--~~~~~-~~~~~~~~----~~~v~~~~~~p~~~~~-~~~--~~~~~~~~l~ 384 (494)
.++|+|||+++++++..++.|.+|++.. ++... ..+..... ...+.+++|+|+|..+ ++. ++.+.+|++.
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 8999999999988888899999999985 43211 11111111 1458899999999865 443 7889999997
Q ss_pred C
Q psy14130 385 T 385 (494)
Q Consensus 385 ~ 385 (494)
.
T Consensus 271 ~ 271 (347)
T 3hfq_A 271 A 271 (347)
T ss_dssp G
T ss_pred C
Confidence 5
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=6.1e-17 Score=170.07 Aligned_cols=203 Identities=11% Similarity=0.036 Sum_probs=143.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----C
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-----G 251 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-----~ 251 (494)
..|.+++|+|+ ..++++. |+.|++||+.+++... +..+...+.+++|+|||+.|+++ .|+.|++||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999999 4555553 5999999999887654 44467789999999999999985 689999999998 7
Q ss_pred ceEEEeeecCCC-------------CceEEEEECCCCeEEEEEecC-----------------------------CCCce
Q psy14130 252 LVISQGVCHPGT-------------RSSKAVFIGDTGRIVTTGFSR-----------------------------HSDRQ 289 (494)
Q Consensus 252 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~g~~~-----------------------------~~d~~ 289 (494)
+.......+... .+..+.|+|++..|+++++.. ..+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 765544433331 137889999977777665321 14578
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----cEEEEEeeCCCceEEecccccC--CCCeeEE
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----NIRYYELTNERPYIHFLNQSLS--GAPQRGL 362 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----~i~~wd~~~~~~~~~~~~~~~~--~~~v~~~ 362 (494)
|++||+.+...........+...+..++|+|||+.| ++++.|+ .|++||+.+++........... ...+.++
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENIL-YVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEE-EEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEE-EEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 999999875422111111344678899999999998 5545554 8999999998433333222111 1235788
Q ss_pred EEec--CCceeeec--cceeEEEEeeC
Q psy14130 363 GFMP--KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p--~~~~~~~~--~~~~~~~~l~~ 385 (494)
+|+| ++.+++++ ++.+++|.+..
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred eeecCCCCEEEEEEccCCccEEEEEEC
Confidence 9999 99877764 67899999874
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=1.4e-15 Score=146.06 Aligned_cols=224 Identities=13% Similarity=0.157 Sum_probs=147.9
Q ss_pred CcEEEEEcCCC-CCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCCeEEEE------ecC---
Q psy14130 149 HRVKLWYIPDG-GLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVGKGEALTV------IDC--- 217 (494)
Q Consensus 149 ~~v~iw~~~~~-~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~~~~~~~~------~~~--- 217 (494)
+.|.+|++... +.. ..+.....+......+++ ++ +.|++++ .++.|.+|++.....+.. ..+
T Consensus 75 ~~v~~~~~~~~~g~~----~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~ 147 (361)
T 3scy_A 75 AAVSAFAFDKEKGTL----HLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGP 147 (361)
T ss_dssp CEEEEEEEETTTTEE----EEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCS
T ss_pred CcEEEEEEeCCCCcE----EEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCC
Confidence 36899988753 111 233344445566778888 66 4555554 688999999975432211 111
Q ss_pred -----CCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc-------eE-----EEeeecCCCCceEEEEECCCCeEEE
Q psy14130 218 -----HPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGL-------VI-----SQGVCHPGTRSSKAVFIGDTGRIVT 279 (494)
Q Consensus 218 -----h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (494)
+...+.+++|+|+|++|++++ .++.|++|++.... .. .......+..+..++|+|++..+++
T Consensus 148 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 148 DKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp CTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEE
Confidence 123458899999999776655 58999999887543 11 2222333333788999999777777
Q ss_pred EEecCCCCceEEEEeCCCCCCceeEeee----cCCCceEEeEEeCCCCEEEEEEeC-CCcEEEEEee--CCCceEEeccc
Q psy14130 280 TGFSRHSDRQVGLWDENDLNTPLALETV----DSSSGVLFPYYDHDTRILFLAGKG-DGNIRYYELT--NERPYIHFLNQ 352 (494)
Q Consensus 280 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~g~~-dg~i~~wd~~--~~~~~~~~~~~ 352 (494)
++ ..++.|.+||+.+... ...... .+......++|+|||++|+++... ++.|.+|++. +++. ..+..
T Consensus 228 ~~---~~~~~v~v~~~~~g~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~--~~~~~ 301 (361)
T 3scy_A 228 IN---EIGGTVIAFRYADGML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL--TKVGY 301 (361)
T ss_dssp EE---TTTCEEEEEEEETTEE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE--EEEEE
T ss_pred Ec---CCCCeEEEEEecCCce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE--EEeeE
Confidence 77 5789999999875321 111111 122456789999999999777766 7899999996 3442 22222
Q ss_pred ccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 353 SLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 353 ~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
...+..+++++|+|++..++.+ ++.+.+|++..
T Consensus 302 ~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 302 QLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 3224568899999999866553 67899988875
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=3.6e-16 Score=149.14 Aligned_cols=214 Identities=10% Similarity=0.014 Sum_probs=151.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC------Cc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP------DV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~------~~ 221 (494)
++|.+||+.++ +.+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++.+..+..+. ..
T Consensus 21 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~ 93 (349)
T 1jmx_B 21 NNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 93 (349)
T ss_dssp TEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence 47999999887 4444554332 2577899999984455677788999999999998887776332 23
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCce---EEEeeecCCCCceEEEEECCCCeEEEEEecCCC
Q psy14130 222 INCLSFNRDGSRLVTTCKD------------KTVRVLDPRTGLV---ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS 286 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d------------~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 286 (494)
+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+..+. . +..++|+|++. +++++ .
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~-~~~~~~s~dg~-l~~~~----~ 166 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-Q-VYLMRAADDGS-LYVAG----P 166 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-S-CCCEEECTTSC-EEEES----S
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-c-ccceeECCCCc-EEEcc----C
Confidence 7889999999999998865 8999999988543 33333333 3 67888999965 66543 3
Q ss_pred CceEEEEeCCCCCCceeEeeec----------------------------------------------------------
Q psy14130 287 DRQVGLWDENDLNTPLALETVD---------------------------------------------------------- 308 (494)
Q Consensus 287 d~~i~iwd~~~~~~~~~~~~~~---------------------------------------------------------- 308 (494)
.|.+||+.+......+....
T Consensus 167 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp --SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred --cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 39999987654322111000
Q ss_pred --------CCCceEEeEEeC-CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cce
Q psy14130 309 --------SSSGVLFPYYDH-DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 309 --------~~~~v~~~~~~~-~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
....+..++++| +++.++++ ++.|.+||+.+++....+. ....+.+++|+|++..++.+ ++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAAN----LDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEE----CSSCCCEEEECSSSSCEEEESBSSE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEc----CCCCccceEECCCCCEEEEecCCCe
Confidence 001344667889 99998554 8899999999987543332 23457899999998765543 788
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+++|++.+
T Consensus 318 v~v~d~~~ 325 (349)
T 1jmx_B 318 LAVFNPDT 325 (349)
T ss_dssp EEEEETTT
T ss_pred EEEEeccc
Confidence 99999876
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.75 E-value=1.1e-16 Score=151.85 Aligned_cols=217 Identities=12% Similarity=0.033 Sum_probs=156.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-C----CCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC-H----PDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h----~~~ 221 (494)
+.|.+||+.++ +.+..+. ++.. .+.+++|+|++..++++++.++.|.+||+.+++.+..+.. + ...
T Consensus 11 ~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKM-------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTT-------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCC-------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 37999999887 4444444 2222 4789999999855567777789999999999988877653 2 126
Q ss_pred eEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCce
Q psy14130 222 INCLSFNRDGSRLVTTC------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ 289 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~ 289 (494)
+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.... .+..+.|+|++..++++ ++.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~------~~~ 155 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGL------GRD 155 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEE------SSS
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEe------CCe
Confidence 77899999999999886 57999999999998877776532 26788899996555544 467
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----------------------cEEEEEeeCCCce
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----------------------NIRYYELTNERPY 346 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----------------------~i~~wd~~~~~~~ 346 (494)
|.+||+.+...... +........+.|+|+++.+++++..++ .|.+||+.+++..
T Consensus 156 i~~~d~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 156 LHVMDPEAGTLVED---KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEEEETTTTEEEEE---ECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEEEECCCCcEeee---eeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 99999987543222 222211123478999998866655444 3689999988753
Q ss_pred EEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 347 IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 347 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+........+.+++|+|++..++..++.+++|++.+
T Consensus 233 --~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~ 269 (337)
T 1pby_B 233 --MREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEK 269 (337)
T ss_dssp --EEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTT
T ss_pred --EeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCC
Confidence 2222223456789999999998887799999999876
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=1.9e-16 Score=166.69 Aligned_cols=225 Identities=14% Similarity=0.069 Sum_probs=150.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce-------
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI------- 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v------- 222 (494)
.+.+||+.++.. ..+....+|...+.+++|+|+| +.||.++. +.|++||+.+++.......+...+
T Consensus 92 ~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 92 YYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp EEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred eEEEEECCCCce-----EeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence 689999988743 1222334566678999999999 67888775 799999999888766665544433
Q ss_pred -----------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCCCceEEEe
Q psy14130 223 -----------NCLSFNRDGSRLVTTCKDK----------------------------------TVRVLDPRTGLVISQG 257 (494)
Q Consensus 223 -----------~~l~~~~~~~~l~s~~~d~----------------------------------~v~iwd~~~~~~~~~~ 257 (494)
.+++|+|||+.|++++.|+ .|++||+.+++....+
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 7899999999999987653 7999999988865666
Q ss_pred eecC-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCce----EEeEEeCCCCEEEEE
Q psy14130 258 VCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGV----LFPYYDHDTRILFLA 328 (494)
Q Consensus 258 ~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~ 328 (494)
..+. ...+..+.|+|++..+++.......+..|++||+.+......... .+...+ ..++|+|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcCCCCeEEEE
Confidence 5542 223778999999554434432122457899999987653322221 122222 378999999988555
Q ss_pred -EeCCC------cEEEEE-eeCCCc--eEEecccccCCCCeeE-EEEecCCceeee--cc---ceeEEEEeeC
Q psy14130 329 -GKGDG------NIRYYE-LTNERP--YIHFLNQSLSGAPQRG-LGFMPKRGCDVT--QC---EIFRFFKLHT 385 (494)
Q Consensus 329 -g~~dg------~i~~wd-~~~~~~--~~~~~~~~~~~~~v~~-~~~~p~~~~~~~--~~---~~~~~~~l~~ 385 (494)
+..|+ .|.+|| ..+++. ...+. . ....+.. ++|+|++..++. .+ +..++|++..
T Consensus 324 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 324 RAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-S--GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-C--SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EecccCCCcceeEEEEEeccCCCCccceeEee-c--CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 66777 466666 333330 22221 1 1233444 699999987654 23 6789999875
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=9.7e-15 Score=140.49 Aligned_cols=187 Identities=11% Similarity=0.093 Sum_probs=123.5
Q ss_pred CcEEEEEcCC-CCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEe-CCCeEEEEECC-CCeEE--EEec--CCCC
Q psy14130 149 HRVKLWYIPD-GGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAG-FDYLIILWDVG-KGEAL--TVID--CHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~-~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s-~d~~v~iwd~~-~~~~~--~~~~--~h~~ 220 (494)
+.+.+|++.. +.+. ..+..+. .+...+.+++|+|+| ++|+++. .++.|++||+. +++.. ..+. .|..
T Consensus 119 g~v~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLE----KNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEE----EEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred ceEEEEccCCCCcCc----ceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 3689999974 4221 1111111 245679999999999 5666655 46899999998 67543 3343 2467
Q ss_pred ceEEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCceE---EEeeecC----C-C-------CceEEE-EECCCCeEEEEE
Q psy14130 221 VINCLSFNRDGSRLVTTCK-DKTVRVLDPR--TGLVI---SQGVCHP----G-T-------RSSKAV-FIGDTGRIVTTG 281 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~--~~~~~---~~~~~~~----~-~-------~~~~~~-~~~~~~~l~~~g 281 (494)
.+..++|+|||++|++++. ++.|.+|++. +++.. ..+.... + . .+..++ |+|++..++++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 7999999999999988775 7899999765 56542 2222111 1 1 267888 999977676655
Q ss_pred ecCCCCc-----eEEEEeCCCCCCceeEe-eec-CCCceEEeEEeC---CCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 282 FSRHSDR-----QVGLWDENDLNTPLALE-TVD-SSSGVLFPYYDH---DTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 282 ~~~~~d~-----~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~---~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
..+. .|.+|++.......... ... ....+..++|+| ||++|++++..++.|.+|++...
T Consensus 274 ---~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 ---RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2223 89999986322222211 122 234566789999 89999666555699999999876
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=8.7e-16 Score=146.43 Aligned_cols=176 Identities=10% Similarity=0.042 Sum_probs=122.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc-c-----cccEEEEEEcCCCCCEEEEEeCC------------CeEEEEECCCCe
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG-H-----KRRVGYIEWHPTAENVVASAGFD------------YLIILWDVGKGE 210 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~-h-----~~~V~~~~~~p~~~~~l~s~s~d------------~~v~iwd~~~~~ 210 (494)
+.|.+||+.++ +....+.. + ...+.+++|+|+| +.|++++.+ +.|.+||+.+++
T Consensus 65 ~~i~~~d~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 65 GDIYGIDLDTC-------KNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TEEEEEETTTT-------EEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CcEEEEeCCCC-------cEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 36999999887 33333332 2 2347789999998 677777755 899999998743
Q ss_pred ---EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC-------------------------
Q psy14130 211 ---ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG------------------------- 262 (494)
Q Consensus 211 ---~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~------------------------- 262 (494)
.+..+. +...+.+++|+|+|+ +++++. .|.+||+.+++.+..+..+..
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred ccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEe
Confidence 334444 344688999999999 555544 499999999987766653320
Q ss_pred ------------------------------------------CCceEEEEEC-CCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 263 ------------------------------------------TRSSKAVFIG-DTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 263 ------------------------------------------~~~~~~~~~~-~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
..+..++++| ++. +++++ ++.|.+||+.+.+
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~-----~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV-----LNRLAKYDLKQRK 286 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE-----ESEEEEEETTTTE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE-----cCeEEEEECccCe
Confidence 0123445557 644 44444 6799999998754
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
.. ..+.....+..++|+|+++.|++ ++.++.|.+||+.+++.+
T Consensus 287 ~~---~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 287 LI---KAANLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EE---EEEECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTTEEE
T ss_pred EE---EEEcCCCCccceEECCCCCEEEE-ecCCCeEEEEecccccee
Confidence 32 22223445778999999999955 678899999999987754
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=4.5e-15 Score=142.82 Aligned_cols=240 Identities=7% Similarity=0.001 Sum_probs=153.9
Q ss_pred EEEEEEcCcEEEEEcC-CCCCCCCcccceEecccccccEEEEEEcCCCCC-EEEEEe-------------CCCeEEEEEC
Q psy14130 142 AFLVLPIHRVKLWYIP-DGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAEN-VVASAG-------------FDYLIILWDV 206 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~-~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s-------------~d~~v~iwd~ 206 (494)
.+++...+.|.+|++. ++.+. .+.....+ +.+.+++|+|+|.. ++++++ .++++.+|++
T Consensus 53 ~l~~~~~~~v~~~~~~~~g~~~-----~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~ 126 (365)
T 1jof_A 53 NIYGAAMKKWSSFAVKSPTEIV-----HEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSV 126 (365)
T ss_dssp EEEEEEBTEEEEEEEEETTEEE-----EEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEE
T ss_pred EEEEEccceEEEEEECCCCCEE-----EeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEcc
Confidence 3444444479999987 55221 11111111 22456899999832 355553 6899999999
Q ss_pred C-CCeEEEEec----CCCCceEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCceE--EEeeecC-CCCceEEEEECCCCe
Q psy14130 207 G-KGEALTVID----CHPDVINCLSFNRDGSRLVTTCK-DKTVRVLDPR-TGLVI--SQGVCHP-GTRSSKAVFIGDTGR 276 (494)
Q Consensus 207 ~-~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~-d~~v~iwd~~-~~~~~--~~~~~~~-~~~~~~~~~~~~~~~ 276 (494)
. .++....+. .+...+.+++|+|||++|++++. ++.|++||+. +++.. ..+.... +..+..++|+|++..
T Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~ 206 (365)
T 1jof_A 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE
Confidence 7 465544333 25578999999999998887764 6899999998 77643 3333211 233788999999777
Q ss_pred EEEEEecCCCCceEEEEeCCC--CCCce---eEeeecCC----C-------ceEEeE-EeCCCCEEEEEEeCCC-----c
Q psy14130 277 IVTTGFSRHSDRQVGLWDEND--LNTPL---ALETVDSS----S-------GVLFPY-YDHDTRILFLAGKGDG-----N 334 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~--~~~~~---~~~~~~~~----~-------~v~~~~-~~~~~~~l~~~g~~dg-----~ 334 (494)
+++++ ..++.|.+|++.. +.... .+..+... . .+..++ |+|||++|+++...++ .
T Consensus 207 l~v~~---~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~ 283 (365)
T 1jof_A 207 LYALM---EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY 283 (365)
T ss_dssp EEEEE---TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred EEEEE---CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence 77777 5678999998653 22111 11112111 2 477899 9999999977665444 8
Q ss_pred EEEEEee-CCCceEEecccc-cCCCCeeEEEEec---CCceeeec---cceeEEEEeeCCCCeEEEe
Q psy14130 335 IRYYELT-NERPYIHFLNQS-LSGAPQRGLGFMP---KRGCDVTQ---CEIFRFFKLHTTRNMCEPI 393 (494)
Q Consensus 335 i~~wd~~-~~~~~~~~~~~~-~~~~~v~~~~~~p---~~~~~~~~---~~~~~~~~l~~~~~~~~~~ 393 (494)
|.+|++. +++. ....... .....+.+++|+| ++..+++. ++.+++|++.. + .+.++
T Consensus 284 i~v~~~~~~g~~-~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~-~-~l~~~ 347 (365)
T 1jof_A 284 IAGFKLRDCGSI-EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD-E-FLHRV 347 (365)
T ss_dssp EEEEEECTTSCE-EEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET-T-EEEEE
T ss_pred EEEEEECCCCCE-EEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch-h-hCcee
Confidence 9999997 5553 2211111 1234567899999 78776653 47899999987 2 44444
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=2.8e-15 Score=157.76 Aligned_cols=239 Identities=13% Similarity=0.045 Sum_probs=147.3
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcc--cceEecccccccE---------EEEEEcCCCCCEEEEEeCCC----------
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLN--EWIMDLHGHKRRV---------GYIEWHPTAENVVASAGFDY---------- 199 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~--~~~~~~~~h~~~V---------~~~~~~p~~~~~l~s~s~d~---------- 199 (494)
..++....++|++|++.++....... .....+.||...| .+++|+|+| +.|++++.|.
T Consensus 122 ~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 122 SKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp TCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeec
Confidence 34444455689999998774311000 0000112222222 489999999 6888887552
Q ss_pred ------------------------eEEEEECCCCeEE---E-----EecCCCCceEEEEEcCCCCEEEEEeCC----CeE
Q psy14130 200 ------------------------LIILWDVGKGEAL---T-----VIDCHPDVINCLSFNRDGSRLVTTCKD----KTV 243 (494)
Q Consensus 200 ------------------------~v~iwd~~~~~~~---~-----~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~v 243 (494)
.|++||+.+++.. . .+.+|...+.+++|+||++++++.... ..|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 7899999887642 1 234688899999999998877775432 348
Q ss_pred EEEe----CCCCceEEEe----eecCCCCce-----EEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 244 RVLD----PRTGLVISQG----VCHPGTRSS-----KAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 244 ~iwd----~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
.+|| +.++++...+ ..|... +. ...|+|++..++...........|.+||+.+.. ...+ ..+.
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l--t~~~ 356 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGW-AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI--TSGK 356 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSC-SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC--SCSS
T ss_pred EEEcccCCCCCCceEEEEecccccCCce-EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec--ccCc
Confidence 8999 8877755444 355544 44 678999977766643222233467888876644 2222 1233
Q ss_pred CceEEeEEeCCCCEEEEEEeC----CCcEEEEEeeC--CCceEEeccc-cc-CCCCeeEEEEecCCceeeec---c--ce
Q psy14130 311 SGVLFPYYDHDTRILFLAGKG----DGNIRYYELTN--ERPYIHFLNQ-SL-SGAPQRGLGFMPKRGCDVTQ---C--EI 377 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~----dg~i~~wd~~~--~~~~~~~~~~-~~-~~~~v~~~~~~p~~~~~~~~---~--~~ 377 (494)
..+..+.++ +++.|++++.. ++.+++|.+.. +......+.. .. +...+..+.|+|++..++.. . ..
T Consensus 357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 435 (719)
T 1z68_A 357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPI 435 (719)
T ss_dssp SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCE
T ss_pred eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCe
Confidence 456677777 88888777655 58899999875 3211222221 11 23457789999998866642 1 34
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+.+|++.+
T Consensus 436 ~~l~d~~~ 443 (719)
T 1z68_A 436 STLHDGRT 443 (719)
T ss_dssp EEEECSSS
T ss_pred EEEEECCC
Confidence 56776654
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=5.3e-15 Score=143.41 Aligned_cols=223 Identities=11% Similarity=0.048 Sum_probs=141.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEE--EcCCCCCEEEEE----------------------eCCCeEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIE--WHPTAENVVASA----------------------GFDYLIILWD 205 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~--~~p~~~~~l~s~----------------------s~d~~v~iwd 205 (494)
.|.+||+.++ +....+..+...+.... ++|++ .+++.. ..+..|.+||
T Consensus 103 ~l~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 103 NLMRVDLATL-------EENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp EEEEEETTTC-------CEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred eEEEEECCCC-------cceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 6999999987 33334444555554444 48988 566632 2457899999
Q ss_pred CCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceEEEeeecCC-CCceEEEEECCCCeE
Q psy14130 206 VGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPRTGLVISQGVCHPG-TRSSKAVFIGDTGRI 277 (494)
Q Consensus 206 ~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 277 (494)
+.+++... +..+...+..++|+| ||+.|+.++.+ ..|.++|+..++. ..+..+.. ..+....|+|++..+
T Consensus 175 ~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 175 LKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp TTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCE
T ss_pred CCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEE
Confidence 99886544 444667899999999 99999887753 3788888876653 33333332 225678899998778
Q ss_pred EEEEecCCC-CceEEEEeCCCCCCceeEeeecCCCc----eEEeEEeCCCCEEEEEE--------eCCCcEEEEEeeCCC
Q psy14130 278 VTTGFSRHS-DRQVGLWDENDLNTPLALETVDSSSG----VLFPYYDHDTRILFLAG--------KGDGNIRYYELTNER 344 (494)
Q Consensus 278 ~~~g~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~g--------~~dg~i~~wd~~~~~ 344 (494)
+.++..... +..|.+||+.+.... .+........ .....|+|||+.|+++. ..+..|++||+.+++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENR-QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEE-EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEecCCCCCcceEEEEecCCCceE-EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 776632111 235999999876532 2222221000 11237999999885543 567789999999876
Q ss_pred ceEEecccccC---------CCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 345 PYIHFLNQSLS---------GAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~---------~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
. ..+ ..... ...+..++|+|||..++.. ++...+|.+..
T Consensus 332 ~-~~l-~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 332 Q-HRV-ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp E-EEE-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred e-EEe-ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 4 222 22211 0147788999999866542 66777887664
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=3.3e-14 Score=134.70 Aligned_cols=223 Identities=6% Similarity=-0.011 Sum_probs=159.5
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEe---------cCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVI---------DCH 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~---------~~h 218 (494)
+|.+||..++.. ...+ .++-.....++++|+| +++++.+.++.|++||..... .+..+ .++
T Consensus 70 ~i~~~d~~~g~~-------~~~~~~~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 70 TILVIDPNNAEI-------LQSSGKNLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CEEEECTTTCCE-------EEEECTTTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred cEEEEECCCCeE-------EeccCCCccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 589999887732 2222 2455678999999998 689998889999999986442 45555 344
Q ss_pred CCceEEEEEcC-CCCEEEEEe-CCCeEEEEeCCCCceEEEeeecCC---------CCceEEEEECCCCeEEEEEecCCCC
Q psy14130 219 PDVINCLSFNR-DGSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPG---------TRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 219 ~~~v~~l~~~~-~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
-....+|+++| ++.++++.+ .++.|++|| .+++.+..+..... ..+..+++.++++.++++. ..+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d---~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD---REN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE---TTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE---CCC
Confidence 55789999999 788888886 699999999 55776666642211 1267899999878899998 789
Q ss_pred ceEEEEeCCCCCCceeEeeecCCCceEEeEEeC------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeE
Q psy14130 288 RQVGLWDENDLNTPLALETVDSSSGVLFPYYDH------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~ 361 (494)
+.|++||..++.....+........+..++++| +++.+ ++...+..|++||+.+++.+..+-........+.+
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~-v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY-FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC-TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE-eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE
Confidence 999999988544332222223345678888998 33322 33445568999999999875444222223456899
Q ss_pred EEEecCCceeeec--cceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
++++|+|.++++. +..+++|++..
T Consensus 297 ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9999999888875 67788887765
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=2.1e-13 Score=126.30 Aligned_cols=188 Identities=14% Similarity=0.208 Sum_probs=130.2
Q ss_pred CcEEEEEE---cCcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy14130 140 GGAFLVLP---IHRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI 215 (494)
Q Consensus 140 ~g~~~~~~---~~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 215 (494)
+|.+.+.. .+.|.+|+ .++ ..+..+. .+...+.+++++|++ +++++...++.|.+||.. ++.+..+
T Consensus 88 ~g~l~v~~~~~~~~i~~~d-~~g-------~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~ 157 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYN-QYG-------QFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKF 157 (286)
T ss_dssp TTEEEEEECGGGCEEEEEC-TTS-------CEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCeEEEEcCCCCCEEEEEC-CCC-------cEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CCEEEEe
Confidence 34444444 35689998 444 2223332 344678999999998 688888888999999964 5556555
Q ss_pred c--CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCc-eEE
Q psy14130 216 D--CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDR-QVG 291 (494)
Q Consensus 216 ~--~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~ 291 (494)
. .+...+.+++++++|+++++...++.|++||.. ++.+..+..+. ...+..+++.++ +.++++. ..++ .|.
T Consensus 158 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~---~~~~~~i~ 232 (286)
T 1q7f_A 158 GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSN-GEILIAD---NHNNFNLT 232 (286)
T ss_dssp ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTT-CCEEEEE---CSSSCEEE
T ss_pred CCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCC-CCEEEEe---CCCCEEEE
Confidence 4 455678999999999988888889999999984 56666664432 123788889888 5677776 4665 999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
+||... .....+........+..++++|+|+.+ ++ +.|+.|++|++....+
T Consensus 233 ~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~-vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 233 IFTQDG-QLISALESKVKHAQCFDVALMDDGSVV-LA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EECTTS-CEEEEEEESSCCSCEEEEEEETTTEEE-EE-ETTTEEEEEECSCCCC
T ss_pred EECCCC-CEEEEEcccCCCCcceeEEECCCCcEE-EE-CCCCeEEEEEcccccc
Confidence 999643 322222221222347789999999754 66 5799999999876543
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=2.1e-13 Score=142.06 Aligned_cols=195 Identities=10% Similarity=-0.003 Sum_probs=131.8
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCC----------CeEEEEECCC------CeEEEEec-CCCCceEEEEEcCCCCEEEEE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFD----------YLIILWDVGK------GEALTVID-CHPDVINCLSFNRDGSRLVTT 237 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d----------~~v~iwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~ 237 (494)
|...+.+++|+|+| +.|++++.| ..|++||+.+ ++ ...+. .+...+.+++|+|||++|+.+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEE
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEE
Confidence 67789999999999 688888776 5899999987 54 34555 566788899999999999988
Q ss_pred eCC--------CeEEEEeCC-CC---ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCcee
Q psy14130 238 CKD--------KTVRVLDPR-TG---LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLA 303 (494)
Q Consensus 238 ~~d--------~~v~iwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~ 303 (494)
+.+ ..|++||+. ++ +.......+... +..+.|+|++. +++++ ..++ .|.+||+.+... ..
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~-~~~~~~spdg~-l~~~~---~~~~~~~l~~~~~~~~~~-~~ 279 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA-IAQAEWAPDGS-LIVAT---DRTGWWNLHRVDPATGAA-TQ 279 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC-EEEEEECTTSC-EEEEE---CTTSSCEEEEECTTTCCE-EE
T ss_pred ECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce-EcceEECCCCe-EEEEE---CCCCCeEEEEEECCCCce-ee
Confidence 755 379999999 57 333333444444 78899999966 77777 5677 677777654332 11
Q ss_pred EeeecCCC---------ceEEeEEeCCCCEEEEEEeCCCcEEEEEee--CCCceEEecccccCCCCeeEE-EEecCCcee
Q psy14130 304 LETVDSSS---------GVLFPYYDHDTRILFLAGKGDGNIRYYELT--NERPYIHFLNQSLSGAPQRGL-GFMPKRGCD 371 (494)
Q Consensus 304 ~~~~~~~~---------~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~ 371 (494)
+. .+.. .+..++|+|+++.+ +++.. +.+++|.+. +++ ...+... ...+..+ ++.+++.++
T Consensus 280 l~--~~~~~~~~p~w~~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~d~~~~~--~~~l~~~--~~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 280 LC--RREEEFAGPLWTPGMRWFAPLANGLIA-VVHGK-GAAVLGILDPESGE--LVDAAGP--WTEWAATLTVSGTRAVG 351 (662)
T ss_dssp SS--CCSSBSSCCCCSTTCCSEEECTTSCEE-EEEBS-SSCEEEEEETTTTE--EEECCSS--CCEEEEEEEEETTEEEE
T ss_pred cc--cccccccCccccccCceEeEeCCCEEE-EEEEc-CccEEEEEECCCCc--EEEecCC--CCeEEEEEecCCCEEEE
Confidence 11 1111 14567888998877 66767 999999655 343 2333322 3456666 555554444
Q ss_pred eec--cceeEEEEeeC
Q psy14130 372 VTQ--CEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~--~~~~~~~~l~~ 385 (494)
++. +...++|.+..
T Consensus 352 ~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 352 VAASPRTAYEVVELDT 367 (662)
T ss_dssp EEEETTEEEEEEEEET
T ss_pred EEcCCCCCCEEEEEEC
Confidence 443 55567777664
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=4.2e-14 Score=149.05 Aligned_cols=220 Identities=10% Similarity=0.094 Sum_probs=136.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCce------
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-IDCHPDVI------ 222 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v------ 222 (494)
.+.+||+.++.. ..+..|...+...+|||+| +.||.++ |+.|++||+.+++..+. ..++...+
T Consensus 93 ~~~~~d~~~~~~--------~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 93 SYDIYDLNKRQL--------ITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp EEEEEETTTTEE--------CCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred EEEEEECCCCcE--------EEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 578999998732 2456678889999999999 5777775 68999999988775432 22333323
Q ss_pred -----------EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEeCCC---Cc
Q psy14130 223 -----------NCLSFNRDGSRLVTTCKDK------------------------------------TVRVLDPRT---GL 252 (494)
Q Consensus 223 -----------~~l~~~~~~~~l~s~~~d~------------------------------------~v~iwd~~~---~~ 252 (494)
.++.|+|||+.|+.++.|. +|++||+.+ ++
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSS
T ss_pred ccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCC
Confidence 3589999999999876321 588899988 73
Q ss_pred --eEEEeee------cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC----C--ceeEeeecCCCce-----
Q psy14130 253 --VISQGVC------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN----T--PLALETVDSSSGV----- 313 (494)
Q Consensus 253 --~~~~~~~------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~----~--~~~~~~~~~~~~v----- 313 (494)
....+.. |... +..+.|+|++..++........+..|.+||+.++. . ...+....+...+
T Consensus 243 ~~~~~~l~~~~~~~~~~~~-~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 243 NATSIQITAPASMLIGDHY-LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp CCCEEEECCCHHHHTSCEE-EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred cceEEEecCCccCCCCCeE-EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 2233332 4444 78899999955444443212334579999998765 1 1112111222222
Q ss_pred EEeEEeCCCCEEE-EEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeeecc------ceeEEEEe
Q psy14130 314 LFPYYDHDTRILF-LAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVTQC------EIFRFFKL 383 (494)
Q Consensus 314 ~~~~~~~~~~~l~-~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~~~------~~~~~~~l 383 (494)
..+.|+|||+.|+ .....+| .|++||+.+++. .. +... ...+..+.. +++. +...+. ....+|.+
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~-~~-lT~g--~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TF-ITKG--TWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC-EE-SCCS--SSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce-Ee-cccC--CEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 3689999999885 3433444 477778776654 22 2221 234555432 3343 333332 24677777
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
..
T Consensus 397 ~~ 398 (740)
T 4a5s_A 397 QL 398 (740)
T ss_dssp ET
T ss_pred EC
Confidence 65
No 166
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=1.6e-14 Score=148.00 Aligned_cols=212 Identities=11% Similarity=0.003 Sum_probs=141.5
Q ss_pred cCcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCC---CeEEEEecCCCC
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGF---DYLIILWDVGK---GEALTVIDCHPD 220 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~---~~~~~~~~~h~~ 220 (494)
.++++||++.++ +. ..+..|. ..|.+++|+|+ +++++++. +...++|.+.. +... .+... .
T Consensus 43 ~g~~~lw~~~~g-------~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~ 110 (582)
T 3o4h_A 43 EGSVNAYLYDGG-------ET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-K 110 (582)
T ss_dssp TTEEEEEEEETT-------EE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-C
T ss_pred CCceeEEEEcCC-------Cc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-C
Confidence 457999998654 33 3444455 68999999998 58887775 45556654432 2222 44322 2
Q ss_pred ceEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 221 VINCLSFNRDGSR-LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 221 ~v~~l~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.+...+|+|+|+. +++++.++.+.+||+.+++.......+. ....|+|++..+++++......+.|++||+.+..
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC
Confidence 3446688888753 3334444455599999887655444332 6788999976666565211112789999998755
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEEE--------EecCCc
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGLG--------FMPKRG 369 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~--------~~p~~~ 369 (494)
.. .+ ..+...+..++|+|||+.| +++..++ .|++||+.+++.. .+..+ ...+.+++ |+|||.
T Consensus 187 ~~-~l--~~~~~~~~~~~~SpDG~~l-~~~~~~~~~~i~~~d~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~spdg~ 258 (582)
T 3o4h_A 187 LR-VF--DSGEGSFSSASISPGMKVT-AGLETAREARLVTVDPRDGSVE--DLELP--SKDFSSYRPTAITWLGYLPDGR 258 (582)
T ss_dssp CE-EE--CCSSCEEEEEEECTTSCEE-EEEECSSCEEEEEECTTTCCEE--ECCCS--CSHHHHHCCSEEEEEEECTTSC
T ss_pred ce-Ee--ecCCCccccceECCCCCEE-EEccCCCeeEEEEEcCCCCcEE--EccCC--CcChhhhhhccccceeEcCCCc
Confidence 32 22 2355678999999999999 5777888 8999999988764 33322 33455566 999996
Q ss_pred eeeec--cceeEEEEe
Q psy14130 370 CDVTQ--CEIFRFFKL 383 (494)
Q Consensus 370 ~~~~~--~~~~~~~~l 383 (494)
++++. ++.+++|++
T Consensus 259 ~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 259 LAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEETTEEEEEET
T ss_pred EEEEEEcCCcEEEEEE
Confidence 66554 889999998
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=3.2e-15 Score=157.36 Aligned_cols=224 Identities=10% Similarity=0.014 Sum_probs=144.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccc---cEEEEEEcCCCCCEEEEEeC---------CCeEEEEECCCCeEEEEec
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKR---RVGYIEWHPTAENVVASAGF---------DYLIILWDVGKGEALTVID 216 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~s~---------d~~v~iwd~~~~~~~~~~~ 216 (494)
++|++||+.++ +....+.+|.. .|.+++|+|+| +.|++++. |+.|++||+.+++.+....
T Consensus 36 ~~i~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 36 NNIVLYNIETG-------QSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp SCEEEEESSSC-------CEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CCEEEEEcCCC-------cEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 47999999988 44445554543 38999999999 68888776 7899999999987621111
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCC----------------CceEEEEECCCCeEEE
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGT----------------RSSKAVFIGDTGRIVT 279 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~l~~ 279 (494)
....+.+++|+|||+.|+++. |+.|++||+.+++..+.. .++... ....+.|+|++..|++
T Consensus 108 -l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 108 -LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp -CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred -cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 235688999999999999986 789999999988765432 222211 1247999999777776
Q ss_pred EEecCC------------------------------CCceEEEEeCCCCCCc--eeEe----eecCCCceEEeEEeCCCC
Q psy14130 280 TGFSRH------------------------------SDRQVGLWDENDLNTP--LALE----TVDSSSGVLFPYYDHDTR 323 (494)
Q Consensus 280 ~g~~~~------------------------------~d~~i~iwd~~~~~~~--~~~~----~~~~~~~v~~~~~~~~~~ 323 (494)
++.... ....|++||+.+.... ..+. ...+...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 663211 1127899998864321 1110 012445688999999976
Q ss_pred EEEEEEeCC----CcEEEEE----eeCCCceEEecc--cccCCCCee-----EEEEecCCceeee----ccceeEEEEee
Q psy14130 324 ILFLAGKGD----GNIRYYE----LTNERPYIHFLN--QSLSGAPQR-----GLGFMPKRGCDVT----QCEIFRFFKLH 384 (494)
Q Consensus 324 ~l~~~g~~d----g~i~~wd----~~~~~~~~~~~~--~~~~~~~v~-----~~~~~p~~~~~~~----~~~~~~~~~l~ 384 (494)
.+ ++.... ..|.+|| +.+++.. ..+. ...+...+. .++|+|+|..++. .++..++|.+.
T Consensus 266 ~~-~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 266 VC-LQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp EE-EEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred EE-EEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence 65 553322 2488888 6665532 1111 012233444 7899999985432 35555555443
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.63 E-value=2.8e-14 Score=150.44 Aligned_cols=234 Identities=7% Similarity=0.013 Sum_probs=150.6
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEeccccccc-----EEEEEEcCCCCCEEEEEeCC---------CeEEEEEC
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRR-----VGYIEWHPTAENVVASAGFD---------YLIILWDV 206 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~-----V~~~~~~p~~~~~l~s~s~d---------~~v~iwd~ 206 (494)
|.+++...++|++||+.++ +....+.+|... ...++|||+| +.|+.++.+ +.+.+||+
T Consensus 28 g~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 28 HEYLYKQENNILVFNAEYG-------NSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp SEEEEEETTEEEEEETTTC-------CEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CcEEEEcCCcEEEEECCCC-------ceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEEC
Confidence 3444444568999999988 444555666532 2457899999 688888776 56679999
Q ss_pred CCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eecCCC----------------CceEEE
Q psy14130 207 GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCHPGT----------------RSSKAV 269 (494)
Q Consensus 207 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~----------------~~~~~~ 269 (494)
.+++.. .+..|.+.+...+|||||+.|+.+. |+.|++||+.+++..+.. .++... ....+.
T Consensus 100 ~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 100 NKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 998754 4667888999999999999999885 689999999988754321 222211 123488
Q ss_pred EECCCCeEEEEEecCC--------------------------------CCceEEEEeCCC---CCC--ceeEeee----c
Q psy14130 270 FIGDTGRIVTTGFSRH--------------------------------SDRQVGLWDEND---LNT--PLALETV----D 308 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~--------------------------------~d~~i~iwd~~~---~~~--~~~~~~~----~ 308 (494)
|+|++..|+.+.+..+ ...+|++||+.+ ... ...+... .
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 9999777777653211 012688899887 532 1111110 1
Q ss_pred CCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCCc------eEEecccccCCCC-----eeEEEEecCCceee-e
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNERP------YIHFLNQSLSGAP-----QRGLGFMPKRGCDV-T 373 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~~------~~~~~~~~~~~~~-----v~~~~~~p~~~~~~-~ 373 (494)
+...+..++|+|||+.++..... +..|++||+.+++. ...... ..+... ....+|+|||..++ .
T Consensus 258 ~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~-~~~~~~v~~~~~~~p~fspDG~~l~~~ 336 (740)
T 4a5s_A 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKI 336 (740)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE-ECSSSCSSSSSCCCCEECTTSSEEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee-ccCCceEccCcCCCceEcCCCCEEEEE
Confidence 44568889999999966444332 34699999999871 111100 111222 23788999998554 2
Q ss_pred ---ccc--eeEEEEeeC
Q psy14130 374 ---QCE--IFRFFKLHT 385 (494)
Q Consensus 374 ---~~~--~~~~~~l~~ 385 (494)
.++ .+.+|++..
T Consensus 337 ~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 337 ISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EECTTSCEEEEEEETTC
T ss_pred EEcCCCceEEEEEECCC
Confidence 233 455555443
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=8.7e-13 Score=122.08 Aligned_cols=217 Identities=11% Similarity=0.158 Sum_probs=150.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEec------ccccccEEEEEE-cCCCCCEEEEEeC-CCeEEEEECCCCeEEEEec-CCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDL------HGHKRRVGYIEW-HPTAENVVASAGF-DYLIILWDVGKGEALTVID-CHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~------~~h~~~V~~~~~-~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~-~h~ 219 (494)
+.|.+||.. +. .+..+ .+|...+.++++ .+++ +++++... ++.|.+|| .+++.+..+. .+.
T Consensus 51 ~~i~~~d~~-g~-------~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~ 120 (286)
T 1q7f_A 51 HRIQIFDKE-GR-------FKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYGQFVRKFGATIL 120 (286)
T ss_dssp TEEEEECTT-SC-------EEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTSCEEEEECTTTC
T ss_pred CEEEEECCC-Cc-------EEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCCcEEEEecCccC
Confidence 468999876 32 22222 235567899999 4666 56666643 78999999 5677666664 344
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
..+.+++++++|+++++...++.|.+||.. ++.+..+.. +.. .+..+++.++ +.++++. ..++.|++||...
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~-~p~~i~~~~~-g~l~v~~---~~~~~i~~~~~~g 194 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE-FPNGVVVNDK-QEIFISD---NRAHCVKVFNYEG 194 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS-SEEEEEECSS-SEEEEEE---GGGTEEEEEETTC
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC-CcEEEEECCC-CCEEEEE---CCCCEEEEEcCCC
Confidence 678999999999988888888999999965 565655542 222 3788889887 6688877 5789999999753
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-c
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-C 375 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~ 375 (494)
.....+........+..++++++|+.+ ++...++ .|.+||. +++.+..+. .......+.+++++|++.++++. +
T Consensus 195 -~~~~~~~~~g~~~~p~~i~~d~~G~l~-v~~~~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 195 -QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFNLTIFTQ-DGQLISALE-SKVKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp -CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCEEEEECT-TSCEEEEEE-ESSCCSCEEEEEEETTTEEEEEETT
T ss_pred -CEEEEEccCCccCCCcEEEECCCCCEE-EEeCCCCEEEEEECC-CCCEEEEEc-ccCCCCcceeEEECCCCcEEEECCC
Confidence 221111111112567889999999766 7777775 9999995 444433332 22223347899999999888775 7
Q ss_pred ceeEEEEeeC
Q psy14130 376 EIFRFFKLHT 385 (494)
Q Consensus 376 ~~~~~~~l~~ 385 (494)
+.+++|++..
T Consensus 271 ~~v~v~~~~~ 280 (286)
T 1q7f_A 271 YRLYIYRYVQ 280 (286)
T ss_dssp TEEEEEECSC
T ss_pred CeEEEEEccc
Confidence 8899998765
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=1.1e-13 Score=134.06 Aligned_cols=223 Identities=12% Similarity=0.016 Sum_probs=146.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEE--E
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLS--F 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~--~ 227 (494)
.|.+||+.++ +......++...+..+.|+|++ +.|+.++.++.|++||+.+++....+..+...+.... +
T Consensus 61 ~l~~~d~~~g-------~~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 132 (388)
T 3pe7_A 61 NYYLLDLNTQ-------VATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVA 132 (388)
T ss_dssp EEEEEETTTC-------EEEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEE
T ss_pred eEEEEeCCCC-------ceEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeE
Confidence 4888898877 4445555666666678899999 6899999999999999999987777776666665444 4
Q ss_pred cCCCCEEEEEe----------------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecC
Q psy14130 228 NRDGSRLVTTC----------------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSR 284 (494)
Q Consensus 228 ~~~~~~l~s~~----------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~ 284 (494)
++++++++... .+..|.+||+.+++.. .+..+... +..+.|+| ++..++.+....
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~-~~~~~~sp~dg~~l~~~~~~~ 210 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQW-LGHPIYRPYDDSTVAFCHEGP 210 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSC-EEEEEEETTEEEEEEEEECSC
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCcc-ccccEECCCCCCEEEEEEecC
Confidence 89999887532 4478999999998754 34444444 78899999 866666665100
Q ss_pred C--CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC----cEEEEEeeCCCceEEecccccCC--
Q psy14130 285 H--SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG----NIRYYELTNERPYIHFLNQSLSG-- 356 (494)
Q Consensus 285 ~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg----~i~~wd~~~~~~~~~~~~~~~~~-- 356 (494)
. ....|.++|+..... ..+........+..+.|+|||+.|+.++..++ .|++||+.+++.. .+......
T Consensus 211 ~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~~~~~~ 287 (388)
T 3pe7_A 211 HDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR--QLTSMPACSH 287 (388)
T ss_dssp TTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE--EEEEECCEEE
T ss_pred CCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE--EEEcCCCcee
Confidence 0 034788888765332 22211111124778899999998744443332 3999999988742 12111110
Q ss_pred --CCeeEEEEecCCceeee-----------ccceeEEEEeeC
Q psy14130 357 --APQRGLGFMPKRGCDVT-----------QCEIFRFFKLHT 385 (494)
Q Consensus 357 --~~v~~~~~~p~~~~~~~-----------~~~~~~~~~l~~ 385 (494)
....+++|+|||..++. ++..+.+|++..
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 01233479999987763 355778888766
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=1.5e-13 Score=133.27 Aligned_cols=194 Identities=11% Similarity=0.120 Sum_probs=123.5
Q ss_pred EEEcCCCCCEEEEE-----eCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCC
Q psy14130 182 IEWHPTAENVVASA-----GFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPR 249 (494)
Q Consensus 182 ~~~~p~~~~~l~s~-----s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~ 249 (494)
+.|+|++ ..++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+.++.+ ..|.+||+.
T Consensus 147 ~~~spdg-~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 147 RDWQPLT-SWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp GGCCCCC-SHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred cccCCCC-cceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 3567777 344433 45678999999988765544 4677899999999 78877776643 468899987
Q ss_pred CCceEEEeeecC-CCCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEE
Q psy14130 250 TGLVISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILF 326 (494)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 326 (494)
.++... +..+. ...+..+.|+|++..++.++.... .++.|++||+.+... ..+.... ... +.|+| ||+.++
T Consensus 225 ~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~---~~~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 225 GSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMVMP---PCS-HLMSNFDGSLMV 298 (396)
T ss_dssp SCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEECC---SEE-EEEECSSSSEEE
T ss_pred CCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeeeCC---CCC-CCccCCCCceEE
Confidence 665333 32232 223667899999777777763111 125599999987543 2222221 233 88999 999774
Q ss_pred EEEe---------------CCCcEEEEEeeCCCceEEecccccCC---------CCeeEEEEecCCceeeec---cceeE
Q psy14130 327 LAGK---------------GDGNIRYYELTNERPYIHFLNQSLSG---------APQRGLGFMPKRGCDVTQ---CEIFR 379 (494)
Q Consensus 327 ~~g~---------------~dg~i~~wd~~~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~~~~---~~~~~ 379 (494)
.+++ .++.|++||+.+++.. .+ ...... ..+..++|+|++..++.. ++...
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~ 376 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KL-CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPA 376 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCC-EE-EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCE
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceE-Ec-cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCce
Confidence 4331 3578999999887642 22 211110 025668999999766542 45667
Q ss_pred EEEeeC
Q psy14130 380 FFKLHT 385 (494)
Q Consensus 380 ~~~l~~ 385 (494)
+|.+..
T Consensus 377 l~~~~~ 382 (396)
T 3c5m_A 377 IYIADV 382 (396)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 777664
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=3.1e-12 Score=121.16 Aligned_cols=221 Identities=13% Similarity=0.031 Sum_probs=144.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCeEEEEec--CCCCceE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD----YLIILWDVGKGEALTVID--CHPDVIN 223 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~--~h~~~v~ 223 (494)
.|.+||..++. .......+...+.+++++|++ ++++++..+ +.|.+||..++.....+. .+...+.
T Consensus 67 ~i~~~d~~~~~-------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 138 (333)
T 2dg1_A 67 NIFKINPETKE-------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID 138 (333)
T ss_dssp EEEEECTTTCC-------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE
T ss_pred EEEEEeCCCCc-------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc
Confidence 58899887762 222222456789999999998 678777766 689999998776543333 3456799
Q ss_pred EEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 224 CLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
+++++|+|+++++... .+.|..+|..+++..... .+... +..++|++++..++++. ..++.|.+||+.+
T Consensus 139 ~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-~~~i~~~~dg~~l~v~~---~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 139 DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISV-ANGIALSTDEKVLWVTE---TTANRLHRIALED 213 (333)
T ss_dssp EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESS-EEEEEECTTSSEEEEEE---GGGTEEEEEEECT
T ss_pred ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCc-ccceEECCCCCEEEEEe---CCCCeEEEEEecC
Confidence 9999999998887654 356777777665543322 22222 67889999966677776 5688999999864
Q ss_pred C-CCceeE-----eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc---CCCCeeEEEEecCC
Q psy14130 298 L-NTPLAL-----ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL---SGAPQRGLGFMPKR 368 (494)
Q Consensus 298 ~-~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~---~~~~v~~~~~~p~~ 368 (494)
. ...... ........+..++++++|+.+ ++...++.|.+||. .++.+..+..... +...+.+++|+|++
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 214 DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred CCcCcccccceEEEecCCCCCCCceEECCCCCEE-EEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCC
Confidence 2 221111 111122467789999999866 77777899999998 4544333211100 01157899999997
Q ss_pred cee-eec-cc----eeEEEEeeC
Q psy14130 369 GCD-VTQ-CE----IFRFFKLHT 385 (494)
Q Consensus 369 ~~~-~~~-~~----~~~~~~l~~ 385 (494)
..+ ++. .+ ...+|.+..
T Consensus 292 ~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 292 NQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp CEEEEEEECGGGTCCEEEEEEEC
T ss_pred CEEEEEeCccCCCCCceEEEEec
Confidence 544 443 21 356666654
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=1.6e-12 Score=124.62 Aligned_cols=217 Identities=9% Similarity=0.050 Sum_probs=139.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCH- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h- 218 (494)
.|.+||..++ +.+..+..+..+ .++|+|++ ++|+++. .++.|.+||+.+++.+..+...
T Consensus 32 ~v~v~D~~t~-------~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 32 RVHVYDYTNG-------KFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp EEEEEETTTC-------CEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred eEEEEECCCC-------eEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 6999998887 444555555554 89999999 5777765 3678999999998888777532
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEE---------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTG--------- 281 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g--------- 281 (494)
......++++|||++|+++.. ++.|.+||+.+++.+.. +.... ...+.+.|++...+++.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~---~~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG---CWSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT---EEEEEECTTSSSEEEEEETTSSEEEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC---cceeEEcCCCCeeEEEECCCCcEEEE
Confidence 345678999999999998874 68999999999988776 43211 11112222221111111
Q ss_pred -ecC-----------------------------------CCCceEEEEeCCCCCCceeEeeec--------C---CCceE
Q psy14130 282 -FSR-----------------------------------HSDRQVGLWDENDLNTPLALETVD--------S---SSGVL 314 (494)
Q Consensus 282 -~~~-----------------------------------~~d~~i~iwd~~~~~~~~~~~~~~--------~---~~~v~ 314 (494)
+.. +.++.|.++|+....... ..... . ..+..
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 179 NLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKV-DGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEE-EEEEESCCHHHHHTTCEECCSS
T ss_pred EECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCcee-cccccccCccccccccccCCee
Confidence 000 123445555544321110 00000 0 01122
Q ss_pred EeEEeCCCCEEEEEEe----------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGK----------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~----------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.++++|+++.+|++.. ..+.|.+||+.+++.+..+. .+. +.+++|+|+|..+.+. .+.+.+|++
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~----~~~-p~~ia~spdg~~l~v~n~~~v~v~D~ 332 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP----GRD-ALSMTIDQQRNLMLTLDGGNVNVYDI 332 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE----CTT-CCEEEEETTTTEEEEECSSCEEEEEC
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe----cCC-eeEEEECCCCCEEEEeCCCeEEEEEC
Confidence 3689999999988765 13479999999987654432 234 8999999999876553 578999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 333 ~t 334 (361)
T 2oiz_A 333 SQ 334 (361)
T ss_dssp SS
T ss_pred CC
Confidence 77
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.54 E-value=1.6e-12 Score=136.29 Aligned_cols=221 Identities=9% Similarity=0.023 Sum_probs=143.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCe----------------EEEEECCCCeE--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYL----------------IILWDVGKGEA-- 211 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~----------------v~iwd~~~~~~-- 211 (494)
+|++||+.++ +.......+ ..+.+++|+|+| +.|+.++.++. |++|++.+++.
T Consensus 152 ~i~v~d~~tg-------~~~~~~~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 222 (710)
T 2xdw_A 152 TIKFMKVDGA-------KELPDVLER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED 222 (710)
T ss_dssp EEEEEETTTT-------EEEEEEEEE-ECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC
T ss_pred EEEEEECCCC-------CCCcccccC-cccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc
Confidence 5999999887 333222212 236789999999 57777777765 99999988752
Q ss_pred EEEec--CCCCceEEEEEcCCCCEEEEEeC-----CCeEEEEeCCC------Cc-eEEEeeecCCCCceEEEEECCCCeE
Q psy14130 212 LTVID--CHPDVINCLSFNRDGSRLVTTCK-----DKTVRVLDPRT------GL-VISQGVCHPGTRSSKAVFIGDTGRI 277 (494)
Q Consensus 212 ~~~~~--~h~~~v~~l~~~~~~~~l~s~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l 277 (494)
...+. .|...+.++.|+|||++|+.++. +..|.+||+.+ +. ....+..+... .. ..|+++++.+
T Consensus 223 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~s~dg~~l 300 (710)
T 2xdw_A 223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EY-DYVTNEGTVF 300 (710)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CE-EEEEEETTEE
T ss_pred eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EE-EEEeccCCEE
Confidence 22233 35666889999999999988765 67899999986 53 35566666554 33 3578888888
Q ss_pred EEEEecCCCCceEEEEeCCCCCCceeEeeecCCC--ceEEeEEeCCCCEEEEEEeCCCcE--EEEEeeCCCceEEecccc
Q psy14130 278 VTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS--GVLFPYYDHDTRILFLAGKGDGNI--RYYELTNERPYIHFLNQS 353 (494)
Q Consensus 278 ~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~g~~dg~i--~~wd~~~~~~~~~~~~~~ 353 (494)
+..+........|.+||+.+...........+.. .+..+.|++++. ++++...|+.. .+||+.+++.... +...
T Consensus 301 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~-l~~~ 378 (710)
T 2xdw_A 301 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKI-FPLE 378 (710)
T ss_dssp EEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEE-ECCC
T ss_pred EEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEe-cCCC
Confidence 8877211224579999998753211111122322 566788886554 54888888864 5556656664333 2221
Q ss_pred cCCCCeeEEEEecCCceeee---c---cceeEEEEeeC
Q psy14130 354 LSGAPQRGLGFMPKRGCDVT---Q---CEIFRFFKLHT 385 (494)
Q Consensus 354 ~~~~~v~~~~~~p~~~~~~~---~---~~~~~~~~l~~ 385 (494)
...+.+++++|++..++. + ...+..|++.+
T Consensus 379 --~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 379 --VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp --SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred --CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 456888999998864442 1 35677777765
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=4.7e-12 Score=119.78 Aligned_cols=203 Identities=14% Similarity=0.063 Sum_probs=145.4
Q ss_pred cccEEEEEEcCCCCCEEEEEeCC------------------------CeEEEEECCCCeEEEEec-CCCCceEEEEEcCC
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFD------------------------YLIILWDVGKGEALTVID-CHPDVINCLSFNRD 230 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d------------------------~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~ 230 (494)
-..+.+++++|+| +++++.+.+ ++|.+||..+++.+..+. ++-.....++++++
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 4668999999998 688888877 479999999888776664 45567899999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCc-eEEEee---------ecCCCCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCC
Q psy14130 231 GSRLVTTCKDKTVRVLDPRTGL-VISQGV---------CHPGTRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLN 299 (494)
Q Consensus 231 ~~~l~s~~~d~~v~iwd~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~ 299 (494)
|+++++...++.|++||..... .+..+. .+.. .+..+++.++++.++++. + .++.|++||.. +.
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~-~P~~ia~~~~~g~lyv~d---~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC-QPTDVAVEPSTGAVFVSD---GYCNSRIVQFSPS-GK 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS-SEEEEEECTTTCCEEEEE---CSSCCEEEEECTT-SC
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC-CCcEEEEeCCCCeEEEEe---CCCCCeEEEEcCC-CC
Confidence 9988888889999999986542 444442 2222 378899999557888887 5 58999999943 23
Q ss_pred CceeEeeec--------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-----
Q psy14130 300 TPLALETVD--------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP----- 366 (494)
Q Consensus 300 ~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p----- 366 (494)
....+.... .......++++|++..||++...++.|++||..+++.+..+ ........+.+++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI-KHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CCTTTTTCEEEEEEETTEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE-eccccCCCcceeeecCCEEEE
Confidence 222221111 11237889999997777799999999999999988765443 2223356688999999
Q ss_pred -CCceeeec--cceeEEEEeeC
Q psy14130 367 -KRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 367 -~~~~~~~~--~~~~~~~~l~~ 385 (494)
++...++. +..+++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTT
T ss_pred eCCCEEeccCCCcEEEEEEcCC
Confidence 33333332 33677777665
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=1.4e-11 Score=124.43 Aligned_cols=222 Identities=12% Similarity=0.047 Sum_probs=162.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVG--KGEALTVIDCHPDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~l~ 226 (494)
++|.++|..++ +.+..+. ....+..+.|+|+| +++++++.|+.|.+||+. +++.+..+.. ......++
T Consensus 177 ~~V~viD~~t~-------~v~~~i~-~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia 246 (567)
T 1qks_A 177 GQIALIDGSTY-------EIKTVLD-TGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIE 246 (567)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEE
T ss_pred CeEEEEECCCC-------eEEEEEe-CCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeE
Confidence 36999999988 4444444 23356799999999 688888999999999995 7788888874 34568999
Q ss_pred Ec----CCCCEEEEEeC-CCeEEEEeCCCCceEEEeee----------cCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 227 FN----RDGSRLVTTCK-DKTVRVLDPRTGLVISQGVC----------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 227 ~~----~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
|+ |||++++++.. +++|.++|..+.+.+..+.. |...++..+..++++..+++.- ...|.|.
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~---~~~g~v~ 323 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKIL 323 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE---TTTTEEE
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe---cCCCeEE
Confidence 99 69998887764 59999999999998877653 2233467788888766666666 6789999
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-ccCCCCeeEEE-EecC-C
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-SLSGAPQRGLG-FMPK-R 368 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~v~~~~-~~p~-~ 368 (494)
++|..+... .....+........+.|+|++++++++...++.|.++|+.+++..... .. -....+-+++. ++|+ +
T Consensus 324 ~vd~~~~~~-~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i-~vgg~~Phpg~g~~~~~p~~g 401 (567)
T 1qks_A 324 LVDYTDLNN-LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGANFVHPTFG 401 (567)
T ss_dssp EEETTCSSE-EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSSBCCTTCEEEEETTTE
T ss_pred EEecCCCcc-ceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE-eccCcCCCCccceeeECCCCC
Confidence 999876442 233344455567788999999999888888999999999998754333 22 11122334444 4787 4
Q ss_pred ceeee---ccceeEEEEeeC
Q psy14130 369 GCDVT---QCEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~---~~~~~~~~~l~~ 385 (494)
.+.++ +++.+.+++...
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeCCCCCCeEEEecCCC
Confidence 44444 357899998765
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=8e-13 Score=137.59 Aligned_cols=224 Identities=8% Similarity=-0.040 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEE---------EEEEc--CCCCCEEEEEe-CCCeEEEEECC--CCeEEEEe
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVG---------YIEWH--PTAENVVASAG-FDYLIILWDVG--KGEALTVI 215 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~--p~~~~~l~s~s-~d~~v~iwd~~--~~~~~~~~ 215 (494)
...||....+ .....+..|...+. ...|+ |+|..+|+.++ .+..|.+|++. .......+
T Consensus 48 ~~~l~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l 120 (662)
T 3azo_A 48 RATLVRRRAD-------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPL 120 (662)
T ss_dssp EEEEEEECTT-------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEEC
T ss_pred cEEEEEECCC-------CCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEec
Confidence 5788986444 23345666665555 56565 99854144444 46677777775 20334556
Q ss_pred cC-----CCCceEEEEEcCCCCEEEEEeCC----------CeEEEEeCCC------CceEEEee-ecCCCCceEEEEECC
Q psy14130 216 DC-----HPDVINCLSFNRDGSRLVTTCKD----------KTVRVLDPRT------GLVISQGV-CHPGTRSSKAVFIGD 273 (494)
Q Consensus 216 ~~-----h~~~v~~l~~~~~~~~l~s~~~d----------~~v~iwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~ 273 (494)
.. |...+.+++|+|||+.|++++.| ..|++||+.+ ++. ..+. .+... +..+.|+|+
T Consensus 121 ~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~-~~~~~~SpD 198 (662)
T 3azo_A 121 TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRF-VTGPRLSPD 198 (662)
T ss_dssp SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSE-ECCCEECTT
T ss_pred cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCc-ccCceECCC
Confidence 55 66788999999999999998877 5899999988 554 3343 33333 677899999
Q ss_pred CCeEEEEEecCC----CCceEEEEeCC-CCC--CceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc--EEEEEeeCCC
Q psy14130 274 TGRIVTTGFSRH----SDRQVGLWDEN-DLN--TPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN--IRYYELTNER 344 (494)
Q Consensus 274 ~~~l~~~g~~~~----~d~~i~iwd~~-~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~--i~~wd~~~~~ 344 (494)
+..|+.++.... ....|++||+. ++. ....+. ..+...+..+.|+|||+ +++++..|+. |.+||+.+++
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc
Confidence 777776662110 12589999998 331 222221 12346788999999999 5577778884 5555554555
Q ss_pred ceEEecccccC-CCC-----eeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 345 PYIHFLNQSLS-GAP-----QRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~-~~~-----v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
. ..+...... ..+ +..++|+|++.++++. .+..++|.+..
T Consensus 277 ~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 323 (662)
T 3azo_A 277 A-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDP 323 (662)
T ss_dssp E-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEET
T ss_pred e-eecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEEC
Confidence 3 232221110 011 5679999998877664 27788997764
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=5.5e-12 Score=120.84 Aligned_cols=202 Identities=12% Similarity=0.118 Sum_probs=132.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEE------ecCCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTV------IDCHPD 220 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~------~~~h~~ 220 (494)
+.|.+||+.++ +.+.. +. +.. ...+.+.|++...+++.+.||.+.+|++.. ++.... +..+..
T Consensus 131 ~~v~v~d~~~~-------~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~ 201 (361)
T 2oiz_A 131 TSIGIVDVAKG-------DYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD 201 (361)
T ss_dssp EEEEEEETTTT-------EEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS
T ss_pred CeEEEEECCCC-------cEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC
Confidence 46999999987 44444 33 222 233667888767889999999999999865 544422 222222
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--EEEeee------cCCC---CceEEEEECCCCeEEEEEecCC----
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV--ISQGVC------HPGT---RSSKAVFIGDTGRIVTTGFSRH---- 285 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~------~~~~---~~~~~~~~~~~~~l~~~g~~~~---- 285 (494)
++ .+.+++++..++..+.++.|.++|+..+.. ...+.. +... ....+++++++++++++.....
T Consensus 202 ~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 202 PI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp CB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred ce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 22 334567788888888899999999976542 222211 0000 0223788999888887751000
Q ss_pred ---CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC--CceEEecccccCCCCee
Q psy14130 286 ---SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE--RPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 286 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~~~~~~~v~ 360 (494)
....|.+||+.+.+. +..+.... +..++|+|||++||+++ . +.|.+||..++ +.+..+. ..+...+
T Consensus 281 ~~~~~~~v~viD~~t~~~---v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t~~l~~~~~i~---~~G~~P~ 351 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQR---VARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQPEPKLLRTIE---GAAEASL 351 (361)
T ss_dssp TTCCCSEEEEEETTTTEE---EEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSSSSCEEEEEET---TSCSSEE
T ss_pred ccCCCceEEEEECCCCcE---EEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCCCcceeeEEec---cCCCCcE
Confidence 135899999987643 23333334 88999999999996554 4 99999999998 6543321 2356688
Q ss_pred EEEEecCCc
Q psy14130 361 GLGFMPKRG 369 (494)
Q Consensus 361 ~~~~~p~~~ 369 (494)
.++++|+|.
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 999999985
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.50 E-value=1e-11 Score=117.47 Aligned_cols=210 Identities=10% Similarity=-0.009 Sum_probs=146.4
Q ss_pred cceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC----Ce
Q psy14130 167 EWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD----KT 242 (494)
Q Consensus 167 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----~~ 242 (494)
+....+.++...+.+++|+|++ ++++++..++.|.+||..+++.......+...+.+++|+++|++++++..+ +.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred ceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 3445566677778999999998 688888889999999998887665554567889999999999988887766 78
Q ss_pred EEEEeCCCCceEEEeee-cCCCCceEEEEECCCCeEEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEE
Q psy14130 243 VRVLDPRTGLVISQGVC-HPGTRSSKAVFIGDTGRIVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLF 315 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 315 (494)
|.+||..+++....+.. .....+..+++.++ +.++++. .. .+.|..+|..+... ..+. .....+..
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~ 186 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTD---FRGYSTNPLGGVYYVSPDFRTV-TPII--QNISVANG 186 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEE---CCCBTTBCCEEEEEECTTSCCE-EEEE--EEESSEEE
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEe---ccccccCCCceEEEEeCCCCEE-EEee--cCCCcccc
Confidence 99999988775433321 12233788889888 4666665 22 35666666554222 1111 12235678
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeC-CCceEEe----cccccCCCCeeEEEEecCCceeeec--cceeEEEEee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTN-ERPYIHF----LNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLH 384 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~-~~~~~~~----~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~ 384 (494)
++|+|+++.|+++...++.|.+||+.+ +.....+ .........+.++++.+++.+.++. ++.+.+|+..
T Consensus 187 i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 187 IALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 999999998878887889999999974 3322111 1111112357889999999888775 5678888763
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.4e-11 Score=113.00 Aligned_cols=216 Identities=12% Similarity=0.050 Sum_probs=158.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccccc-ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHK-RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~ 226 (494)
+.|.+||.+++ +.+..+..+. ..+.++.+.|+| ++|+ +.++.|..||. +++.+..+..+ ...+.++.
T Consensus 15 ~~v~~~d~~tG-------~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 15 NKIAIINKDTK-------EIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp SEEEEEETTTT-------EEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred CEEEEEECCCC-------eEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 36999998888 5555665554 468899999998 6888 45788999999 89999988865 35788999
Q ss_pred EcCCCCEEEEEeC-CCeEEEEeCCCCceEEEeeecCC-----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC
Q psy14130 227 FNRDGSRLVTTCK-DKTVRVLDPRTGLVISQGVCHPG-----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT 300 (494)
Q Consensus 227 ~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~ 300 (494)
+.++|+.+++.+. ++.|..+|. +|+.+.++..... .....+...++ +.++++. ..++.|..||.. ++.
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~---~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPL---FATSEVREIAPN-GQL 157 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEE---TTTTEEEEECTT-SCE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC-CCEEEEe---cCCCEEEEECCC-CCE
Confidence 9999999999887 888988886 6887777653221 01334556676 5566666 589999999987 554
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-c--CCCCeeEEEEecCCceeeec--c
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-L--SGAPQRGLGFMPKRGCDVTQ--C 375 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-~--~~~~v~~~~~~p~~~~~~~~--~ 375 (494)
.-. ......+..+...++++.+ +++..++.|..+|..+++.+.++-..- . .-..+.+++..++|.++++. +
T Consensus 158 ~w~---~~~~~~~~~~~~~~~g~~~-v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 158 LNS---VKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp EEE---EECSSCCCEEEECTTSCEE-EECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred EEE---EECCCCccceeEcCCCCEE-EEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 332 2233455667788999988 777778889999999998866654321 1 11237888999999988875 2
Q ss_pred --------ceeEEEEeeC
Q psy14130 376 --------EIFRFFKLHT 385 (494)
Q Consensus 376 --------~~~~~~~l~~ 385 (494)
+..++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp TCTTGGGSCCCSEEEECT
T ss_pred ccccccccCCceEEEECC
Confidence 2557888876
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=4.6e-11 Score=112.83 Aligned_cols=213 Identities=12% Similarity=0.079 Sum_probs=148.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCC-----CceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHP-----DVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-----~~v~ 223 (494)
+.|.+||..++ +.+.++. .......+++++++ .++++...++.|.+||+.+++....+.... ....
T Consensus 64 ~~v~viD~~t~-------~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 64 HVIFAIDINTF-------KEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE 134 (328)
T ss_dssp TEEEEEETTTC-------CEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC
T ss_pred CEEEEEECccc-------EEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc
Confidence 46999999988 4444443 34568899999987 666666589999999999998877776332 1556
Q ss_pred EEEEcCCCCEEEEEe--CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC----------ceEE
Q psy14130 224 CLSFNRDGSRLVTTC--KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD----------RQVG 291 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d----------~~i~ 291 (494)
.+++ ++..|+.+. .++.|.++|+.+++.+..+..... ...+.+.++ +++++++ ..+ +.|.
T Consensus 135 ~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~--p~~i~~~~d-G~l~v~~---~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 135 QMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ--PTSLVMDKY-NKMWTIT---DGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC--BCCCEECTT-SEEEEEB---CCBCTTCSSCBCCCEEE
T ss_pred eEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC--ccceEEcCC-CCEEEEE---CCCccCCccccCCceEE
Confidence 7777 344555554 489999999999998877765433 567888887 5676666 333 7899
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEec-CCc
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFMP-KRG 369 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~p-~~~ 369 (494)
++|..+...... ...........++++|+++.||++.+ .|.+||..+++.... .... ......+++++| ++.
T Consensus 207 ~id~~t~~v~~~-~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~--~~~~~~~~~p~gi~vdp~~g~ 280 (328)
T 3dsm_A 207 RIDAETFTVEKQ-FKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR--PFLEFRDTKYYGLTVNPNNGE 280 (328)
T ss_dssp EEETTTTEEEEE-EECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS--CSBCCCSSCEEEEEECTTTCC
T ss_pred EEECCCCeEEEE-EecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee--eeecCCCCceEEEEEcCCCCe
Confidence 999886542212 22222346889999999999977643 899999988764211 1111 135689999999 566
Q ss_pred eeeec------cceeEEEEee
Q psy14130 370 CDVTQ------CEIFRFFKLH 384 (494)
Q Consensus 370 ~~~~~------~~~~~~~~l~ 384 (494)
+.++. ++.+.+|+..
T Consensus 281 lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT
T ss_pred EEEEcccccccCCEEEEECCC
Confidence 66665 4566666654
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=1.9e-11 Score=113.66 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=145.4
Q ss_pred EecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 170 MDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 170 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
..+..+.....+++|+|++..+++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 3444456677899999998438889999999999999877 56676777889999999999988887778999999998
Q ss_pred CCceEEEeeecC---CCCceEEEEECCCCeEEEEEec-CC-------------CCceEEEEeCCCCCCceeEeeecCCCc
Q psy14130 250 TGLVISQGVCHP---GTRSSKAVFIGDTGRIVTTGFS-RH-------------SDRQVGLWDENDLNTPLALETVDSSSG 312 (494)
Q Consensus 250 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~g~~-~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~ 312 (494)
+++......... ...+..+++.++ +.++++... .. ..+.|..+|.. .... ........
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~--~~~~~~~~ 173 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLS--APIRDRVK 173 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEE--EEECCCSS
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC--CCEE--EeecCCCC
Confidence 887543332211 112567888888 566665200 01 13456666654 2211 12234456
Q ss_pred eEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCc-e-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 313 VLFPYYDHDTRILFLAGKGDGNIRYYELT-NERP-Y-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 313 v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~-~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
...++|+|+++.+ ++.+.++.|.+|++. +++. . .... . .....+.++++.++|.+.++.++.+.+|+..
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~ 245 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGLIWASAGDGVHVLTPD 245 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSCEEEEETTEEEEECTT
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCCEEEEcCCeEEEECCC
Confidence 7889999999999 888889999999997 4443 1 1222 2 1345578999999999888877778888765
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=8.3e-10 Score=102.25 Aligned_cols=197 Identities=9% Similarity=0.026 Sum_probs=133.3
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV 253 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 253 (494)
....+.++++.+++ .++++...++.|.+||. +++... ....+...+.+++++++|+++++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 44578999999998 68888777889999998 554433 23335567899999999988887777889999999 6765
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
...........+..+++.++ +.++++. ..++.|.+||. +.. ............+..++++++|+.+ ++...++
T Consensus 174 ~~~~~~~~~~~~~~i~~~~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~ 246 (299)
T 2z2n_A 174 TEFKIPTPASGPVGITKGND-DALWFVE---IIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLW-FTEWGAN 246 (299)
T ss_dssp EEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTT
T ss_pred EEeeCCCCCCcceeEEECCC-CCEEEEc---cCCceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEE-EeccCCc
Confidence 43211112223678888887 5677766 46789999998 433 2222111234568899999998854 7666788
Q ss_pred cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 334 NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.|..||. +++. ..+. .......+.++++ +++.+.++. .+.+..++..+
T Consensus 247 ~i~~~d~-~g~~-~~~~-~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 247 KIGRLTS-NNII-EEYP-IQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp EEEEEET-TTEE-EEEE-CSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred eEEEECC-CCce-EEEe-CCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 9999998 4432 2221 1122356899999 988877764 44444444433
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.47 E-value=7.7e-13 Score=128.31 Aligned_cols=217 Identities=7% Similarity=-0.074 Sum_probs=138.4
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE-----
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC----- 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~----- 224 (494)
.|.+||+.++ +......++......+.|+|+| +.|+.++.++.|++||+.+++.......+......
T Consensus 61 ~l~~~d~~~~-------~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~ 132 (396)
T 3c5m_A 61 NYYLLNLETQ-------QAVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVA 132 (396)
T ss_dssp EEEEEETTTT-------EEEECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEE
T ss_pred eEEEEECCCC-------cEEEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEE
Confidence 5788898776 3222222222223347899998 68988888899999999988766665545443322
Q ss_pred --------------EEEcCCCCEEEEE-----eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecC
Q psy14130 225 --------------LSFNRDGSRLVTT-----CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSR 284 (494)
Q Consensus 225 --------------l~~~~~~~~l~s~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~ 284 (494)
+.|+|+++.++.+ ..+..|.+||+.+++..... .+... +..+.|+| ++..++.+.-
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~-~~~~~~sp~dg~~l~~~~~-- 208 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW-LGHPIYRPFDDSTVGFCHE-- 208 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC-EEEEEEETTEEEEEEEEEC--
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc-cccceECCCCCCEEEEEec--
Confidence 3567777766554 35678999999988855444 34444 78889999 6555666551
Q ss_pred CCC----ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC----CcEEEEEeeCCCceEEecccccCC
Q psy14130 285 HSD----RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD----GNIRYYELTNERPYIHFLNQSLSG 356 (494)
Q Consensus 285 ~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d----g~i~~wd~~~~~~~~~~~~~~~~~ 356 (494)
... ..|.+||+..... ..+........+..+.|+|||+.|+.++..+ +.|++||+.+++.. . +....
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~-l~~~~-- 283 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-E-VMVMP-- 283 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-E-EEECC--
T ss_pred CCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-E-eeeCC--
Confidence 112 4789999865432 2221110123577889999999884544332 34999999888642 2 22111
Q ss_pred CCeeEEEEec-CCceeeec------------------cceeEEEEeeC
Q psy14130 357 APQRGLGFMP-KRGCDVTQ------------------CEIFRFFKLHT 385 (494)
Q Consensus 357 ~~v~~~~~~p-~~~~~~~~------------------~~~~~~~~l~~ 385 (494)
... ++|+| ++..++.. +..+.+|++..
T Consensus 284 -~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 284 -PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp -SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred -CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 123 89999 99877752 35677777665
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.45 E-value=3.1e-11 Score=114.02 Aligned_cols=222 Identities=8% Similarity=-0.058 Sum_probs=151.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|.++|..+++....+.... .-.........+.+... .++++...++.|.+||..+++.+.++. .......++++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~-n~~~lg~~~~~i~~~~~--~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRA-NGFKLGDVAQSMVIRDG--IGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHH-HSSCCBSCEEEEEEETT--EEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred ceEEEEECCCCEEhhhhHhhh-cCcccCccceEEEEECC--EEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 369999998874432221000 00112244677877542 577777778999999999999988886 45678999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----CceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCCCcee
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----RSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~~~~~ 303 (494)
++++.+++...++.|.+||+.+++....+...... ....+++ ++++++++. . .++.|.++|+.+.....
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~---~~~~~~v~viD~~t~~~~~- 166 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC---WSYQNRILKIDTETDKVVD- 166 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE---CTTCCEEEEEETTTTEEEE-
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc---CCCCCEEEEEECCCCeEEE-
Confidence 99855555448999999999999987777654410 2456666 457888887 3 48899999998754322
Q ss_pred EeeecCCCceEEeEEeCCCCEEEEEEeCC----------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 304 LETVDSSSGVLFPYYDHDTRILFLAGKGD----------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~~~g~~d----------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+........++++|+|+.+ +++..+ +.|.++|..+++....+. ...+....+++|+|++..+..
T Consensus 167 --~i~~g~~p~~i~~~~dG~l~-v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~--~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 167 --ELTIGIQPTSLVMDKYNKMW-TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK--FKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp --EEECSSCBCCCEECTTSEEE-EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE--CCTTCCCEEEEECTTSCEEEE
T ss_pred --EEEcCCCccceEEcCCCCEE-EEECCCccCCccccCCceEEEEECCCCeEEEEEe--cCCCCCceeEEEecCCCEEEE
Confidence 22333456778999999866 655554 789999998887533321 112346899999998887766
Q ss_pred ccceeEEEEeeC
Q psy14130 374 QCEIFRFFKLHT 385 (494)
Q Consensus 374 ~~~~~~~~~l~~ 385 (494)
.++.+.+|++.+
T Consensus 242 ~~~~v~~~d~~t 253 (328)
T 3dsm_A 242 INNDIWRMPVEA 253 (328)
T ss_dssp ESSSEEEEETTC
T ss_pred EccEEEEEECCC
Confidence 655666666554
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=2.4e-11 Score=111.13 Aligned_cols=216 Identities=8% Similarity=-0.014 Sum_probs=143.5
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-CCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-CHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~ 227 (494)
+.|.+|+..+... ......+...+.++++++++ +++++.. ++.|.+||...... ..+. .....+.++++
T Consensus 46 ~~i~~~~~~~~~~-------~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGT-------TVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAV 115 (270)
T ss_dssp CEEEEECC------------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEE
T ss_pred CcEEEecCCCccc-------ceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEE
Confidence 4688887654421 11112233567889999998 5666666 88999999876543 3333 23367899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|.+||..+............ .+..+++.+++ .++++. ..++.|.+||....... ....
T Consensus 116 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g-~l~v~~---~~~~~i~~~~~~~~~~~--~~~~ 188 (270)
T 1rwi_B 116 DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN-DPDGVAVDNSG-NVYVTD---TDNNRVVKLEAESNNQV--VLPF 188 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC-SCCCEEECTTC-CEEEEE---GGGTEEEEECTTTCCEE--ECCC
T ss_pred CCCCCEEEEECCCCEEEEEECCCceeEeeccccCC-CceeEEEeCCC-CEEEEE---CCCCEEEEEecCCCceE--eecc
Confidence 99999888877889999998766553332222222 26788888874 577776 46789999998754321 1112
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.....+..++++++|. |+++...++.|.+||....... .. .......+.++++.|++.+.++. ++.++++++..
T Consensus 189 ~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~-~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 189 TDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTST-VL--PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp SSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCE-EC--CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred cCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcce-ee--ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 2235678899999995 5488778899999998765432 21 11122468999999999877775 67777777655
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.43 E-value=3.5e-11 Score=114.47 Aligned_cols=201 Identities=15% Similarity=0.179 Sum_probs=129.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---C--eEEEEECCCCeEEEEecCCCCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---Y--LIILWDVGKGEALTVIDCHPDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~--~v~iwd~~~~~~~~~~~~h~~~v~ 223 (494)
..|.+|++.++. . ..+ ..+.+++|+|+| +.|+.++.+ + .|.+||+.+++.......+ . +.
T Consensus 43 ~~l~~~d~~~~~-------~-~~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~ 107 (347)
T 2gop_A 43 NTIVIENLKNNA-------R-RFI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IR 107 (347)
T ss_dssp EEEEEEETTTCC-------E-EEE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EE
T ss_pred ceEEEEeCCCCc-------e-EEc----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-cc
Confidence 358999988762 2 222 467899999999 577766543 3 4888899888766555433 3 99
Q ss_pred EEEEcCCCCEEEEEeCC---------------------------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 224 CLSFNRDGSRLVTTCKD---------------------------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~~d---------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+++|+|||+.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+|++
T Consensus 108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-- 182 (347)
T 2gop_A 108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-- 182 (347)
T ss_dssp EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE--
T ss_pred ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe--
Confidence 99999999999888742 5799999998886455554 3 37899999996
Q ss_pred EEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-------CcEEEEEeeCC
Q psy14130 277 IVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-------GNIRYYELTNE 343 (494)
Q Consensus 277 l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-------g~i~~wd~~~~ 343 (494)
+++++..... ...|.++| +. ....+.. + ..+..+ +|||+.|+..+..+ ..|.+|| ++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~--~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE--DG-KEEKMFE--K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE--TT-EEEEEEE--E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred EEEEEecccccccccccccEEEeC--CC-ceEEecc--C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 5555411000 22455555 32 2222221 2 334433 99999984444332 3677777 44
Q ss_pred CceEEecccccCCCCeeE-EEEecCCceeee--ccceeEEEEeeC
Q psy14130 344 RPYIHFLNQSLSGAPQRG-LGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 344 ~~~~~~~~~~~~~~~v~~-~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
+. ...... ....+.. ++|+ ++ ++++ .++..++| +..
T Consensus 253 ~~-~~l~~~--~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 253 EV-MGILDE--VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp CE-EESSTT--CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred ce-Eecccc--CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 42 233322 2345776 8999 87 5554 37889999 874
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.43 E-value=1.9e-11 Score=127.76 Aligned_cols=185 Identities=7% Similarity=-0.053 Sum_probs=116.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeEEEEecCCCCceEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEALTVIDCHPDVINCL 225 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~~~~~h~~~v~~l 225 (494)
+|++|++.++.... ..+....+|...+.++.|+|+|. +|+.++.++ .|.+||..+++ ...+..+...+...
T Consensus 203 ~v~~~~l~t~~~~~---~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 203 TIRYHTLGTEPSKD---TVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEV 277 (695)
T ss_dssp EEEEEETTSCGGGC---EEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEE
T ss_pred EEEEEECCCCchhc---eEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEE
Confidence 58999998773210 12333445667889999999994 555555444 67777765554 34444566666777
Q ss_pred EEcCCCCEEEEEe---CCCeEEEEeCCCCce--EEEeeecC-CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTTC---KDKTVRVLDPRTGLV--ISQGVCHP-GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~~---~d~~v~iwd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
.| ++|.+++++. .++.|.+||+.+++. ...+..+. ...+..+.+. ++.++++. ..|+..+||.+.-..
T Consensus 278 ~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~---~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 278 HA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEY---LKDATSEVRVATLKG 351 (695)
T ss_dssp EE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEE---EETTEEEEEEEETTC
T ss_pred Ee-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEE---EECCEEEEEEEeCCC
Confidence 67 5566444444 258999999987753 23444343 4335667777 36777777 578888877654211
Q ss_pred CceeEeeecCCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCCc
Q psy14130 300 TPLALETVDSSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNERP 345 (494)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~~ 345 (494)
.............+..+.++|+++.++++.+. .+.|++||+.+++.
T Consensus 352 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 352 KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 11111122234567778899999888655543 46799999988763
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.40 E-value=2e-10 Score=106.62 Aligned_cols=210 Identities=12% Similarity=0.036 Sum_probs=138.9
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC----CCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCH----PDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h----~~~v~~ 224 (494)
+.|..|+..++ ...+..+...+.+++++|+| +++++...++.|.+||..+++........ ...+..
T Consensus 50 ~~i~~~~~~~~---------~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 50 NRTWAWSDDGQ---------LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPND 119 (296)
T ss_dssp TEEEEEETTSC---------EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCC
T ss_pred CEEEEEECCCC---------eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCC
Confidence 46899997754 23344566789999999998 68887777789999999888754433221 235678
Q ss_pred EEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC
Q psy14130 225 LSFNRDGSRLVTTC-----------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD 287 (494)
Q Consensus 225 l~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d 287 (494)
++++|+|+++++.+ ..+.|..+|.. ++ +..+..+... ...++|+|++..+ ++. ..+
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~-~~gi~~s~dg~~l-v~~---~~~ 192 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVK-PNGLAFLPSGNLL-VSD---TGD 192 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSS-EEEEEECTTSCEE-EEE---TTT
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCC-CccEEECCCCCEE-EEe---CCC
Confidence 99999999888732 13467777766 54 3334444443 6889999996666 777 678
Q ss_pred ceEEEEeCCCCCCc-eeEee-ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE-
Q psy14130 288 RQVGLWDENDLNTP-LALET-VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF- 364 (494)
Q Consensus 288 ~~i~iwd~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~- 364 (494)
+.|.+||+...... ..... ......+..++++++|+.+ ++. ++.|.+||.. ++.+..+ .. ... +.+++|
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~-v~~--~~~v~~~~~~-g~~~~~~-~~--~~~-~~~~~f~ 264 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIW-ASA--GDGVHVLTPD-GDELGRV-LT--PQT-TSNLCFG 264 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEE-EEE--TTEEEEECTT-SCEEEEE-EC--SSC-CCEEEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEE-EEc--CCeEEEECCC-CCEEEEE-EC--CCC-ceeEEEE
Confidence 99999998632222 11111 1133456678999999866 555 7889999986 5543322 21 123 889999
Q ss_pred ecCCceee-eccceeEEEEeeC
Q psy14130 365 MPKRGCDV-TQCEIFRFFKLHT 385 (494)
Q Consensus 365 ~p~~~~~~-~~~~~~~~~~l~~ 385 (494)
.|++..+. +... .+|++..
T Consensus 265 ~~d~~~L~v~t~~--~l~~~~~ 284 (296)
T 3e5z_A 265 GPEGRTLYMTVST--EFWSIET 284 (296)
T ss_dssp STTSCEEEEEETT--EEEEEEC
T ss_pred CCCCCEEEEEcCC--eEEEEEc
Confidence 58876444 4333 5666665
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.40 E-value=5.5e-11 Score=124.68 Aligned_cols=204 Identities=9% Similarity=-0.013 Sum_probs=135.1
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCC-C----eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe------
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFD-Y----LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT------ 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d-~----~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~------ 242 (494)
+|...+..++|||+| ++||.++.+ | .|++||+.+++.+.....+ ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccc
Confidence 355578899999999 566655443 3 8999999999876533222 23678999999999999988766
Q ss_pred ----------EEEEeCCCCce--EEEeee--cCCCCceEEEEECCCCeEEEEEecCCC-CceEEEEeCCC------CC-C
Q psy14130 243 ----------VRVLDPRTGLV--ISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHS-DRQVGLWDEND------LN-T 300 (494)
Q Consensus 243 ----------v~iwd~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~-d~~i~iwd~~~------~~-~ 300 (494)
|++|++.+++. ...+.. |... ...+.|+|++..++.+...... +..|++||+.+ .. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW-MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC-EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeE-EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 99999988762 222222 3333 5688999997777776621121 67899999875 32 2
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC---cEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec-
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDG---NIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ- 374 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg---~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~- 374 (494)
...+. .+...+.. .|+|+|+.|++.+..++ .|.+||+.++.. ...++.. .....+.+++|++++.++++.
T Consensus 279 ~~~l~--~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 279 WVKLI--DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE-HEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp CEEEE--CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCEEEEEEEETTTEEEEEEE
T ss_pred eEEee--CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC-CCCCeEEEEEEEcCCEEEEEEE
Confidence 22222 23333333 58899999877665443 699999887642 2333322 112368889999877776664
Q ss_pred -cceeEEEEee
Q psy14130 375 -CEIFRFFKLH 384 (494)
Q Consensus 375 -~~~~~~~~l~ 384 (494)
++..++|.+.
T Consensus 355 ~~g~~~l~~~~ 365 (710)
T 2xdw_A 355 HDVKNTLQLHD 365 (710)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEE
Confidence 6666666554
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1.2e-10 Score=106.47 Aligned_cols=180 Identities=11% Similarity=0.032 Sum_probs=126.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||...... ..+. .....+.++++++++ +++++...++.|.+||..+.............+.++++
T Consensus 87 ~~i~~~d~~~~~~--------~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~ 157 (270)
T 1rwi_B 87 NRVVTLAAGSNNQ--------TVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAV 157 (270)
T ss_dssp TEEEEECTTCSCC--------EECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEE
T ss_pred CEEEEEeCCCceE--------eeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEE
Confidence 3588888665421 1111 233568899999998 68888777889999987655433322233356789999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|.+||............+.. .+..+++.+++ .++++. ..++.|.+||...... . ....
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~d~~g-~l~v~~---~~~~~v~~~~~~~~~~-~-~~~~ 230 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT-APWGIAVDEAG-TVYVTE---HNTNQVVKLLAGSTTS-T-VLPF 230 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC-SEEEEEECTTC-CEEEEE---TTTSCEEEECTTCSCC-E-ECCC
T ss_pred eCCCCEEEEECCCCEEEEEecCCCceEeecccCCC-CceEEEECCCC-CEEEEE---CCCCcEEEEcCCCCcc-e-eecc
Confidence 99999877777789999999987664433222323 37888888874 777777 5788999999865332 1 1111
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.+...+..++++++|+ |+++...++.|++|++...+.
T Consensus 231 ~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 231 TGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 2335688999999997 558888999999999887653
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=6.4e-12 Score=119.65 Aligned_cols=173 Identities=9% Similarity=0.037 Sum_probs=129.1
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-----------EEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-----------ALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVL 246 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iw 246 (494)
.++.+++++.. .++++|+.++ +++|++.... ..... .+.. |+.|+| |++.|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 58899999998 6999999875 6669865322 11223 3566 999999 89999998 88999999
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEE
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (494)
|+++.........|... +..+.+.+. .++++. .||.|.+||+.+... .. ....|.+++|+|+| +
T Consensus 112 dv~sl~~~~~~~~~~~~-v~~i~~~~p--~~av~~----~dG~L~v~dl~~~~~-~~-----~~~~Vs~v~WSpkG--~- 175 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKP-VFQLKNVNN--TLVILN----SVNDLSALDLRTKST-KQ-----LAQNVTSFDVTNSQ--L- 175 (388)
T ss_dssp ESSSTTCEEEEEECSSC-EEEEEECSS--EEEEEE----TTSEEEEEETTTCCE-EE-----EEESEEEEEECSSE--E-
T ss_pred EchhhhccCccceeecc-eeeEEecCC--CEEEEE----CCCCEEEEEccCCcc-cc-----ccCCceEEEEcCCc--e-
Confidence 99887766666677665 777777665 344444 899999999986543 11 23579999999999 4
Q ss_pred EEEeCCCcEEEEEeeCCCc--eEEec------ccccCCCCeeEEEEecCCceeee
Q psy14130 327 LAGKGDGNIRYYELTNERP--YIHFL------NQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~--~~~~~------~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
+.|..||++++|+...++. ...+. .+..+...|.+++|.+++.++++
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 6788999999999887763 22221 11124577999999999998876
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.37 E-value=2.9e-10 Score=108.02 Aligned_cols=204 Identities=12% Similarity=0.122 Sum_probs=128.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeC---------------------------CCeEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGF---------------------------DYLII 202 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---------------------------d~~v~ 202 (494)
.|.+|++.++ +...... +.. +.+++|+|+| +.|+.++. ...|.
T Consensus 86 ~l~~~~~~~g-------~~~~l~~-~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 86 EIWVADLETL-------SSKKILE-AKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp EEEEEETTTT-------EEEEEEE-ESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred eEEEEECCCC-------ceEEEEc-CCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 4778888766 3333222 334 9999999998 56666653 25799
Q ss_pred EEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCceEEEeeecCCCCceEEEEECCCC
Q psy14130 203 LWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK-------TVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG 275 (494)
Q Consensus 203 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (494)
+||+.+++.+..+.. . .+..++|+||| +++++..+. ...||.+.+++ ...+..+ .. +... +|++.
T Consensus 156 ~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~-~~~~--spdg~ 227 (347)
T 2gop_A 156 IFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VS-FYAV--DSDGE 227 (347)
T ss_dssp EEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ES-EEEE--EECSS
T ss_pred EEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cc-eeeE--CCCCC
Confidence 999998887455554 4 78899999999 877776542 33444443554 3344444 32 3333 88877
Q ss_pred eEEEEEecCC----CCceEEEEeCCCCCCceeEeeecCCCceEE-eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 276 RIVTTGFSRH----SDRQVGLWDENDLNTPLALETVDSSSGVLF-PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 276 ~l~~~g~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
.++.++.... ....|.+|| +.. ...+ ...+...+.. +.|+ |+ ++++++.++.+++| +.+++. ....
T Consensus 228 ~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l-~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~-~~~~ 298 (347)
T 2gop_A 228 RILLYGKPEKKYMSEHNKLYIYD--GKE-VMGI-LDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGEI-KPIA 298 (347)
T ss_dssp CEEEEECCSSSCCCSSCEEEEEC--SSC-EEES-STTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSSE-EEEE
T ss_pred EEEEEEccccCCccccceEEEEC--CCc-eEec-cccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCce-EEEe
Confidence 7777761100 134788888 322 1111 1123355665 8899 87 55888899999999 886553 3332
Q ss_pred ccccCCCCeeEEEEecCCceeeec-cce-eEEEEee
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQ-CEI-FRFFKLH 384 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~-~~~-~~~~~l~ 384 (494)
. ....+.+++|+| +.+++.. +.. .++|.+.
T Consensus 299 ~---~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 K---GRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp C---SSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred c---CCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 2 246789999999 5444333 333 4888875
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.36 E-value=1.1e-09 Score=106.59 Aligned_cols=228 Identities=12% Similarity=0.013 Sum_probs=149.4
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEE
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTV 214 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~ 214 (494)
.+|.+++... +.|++||..++. ....... ..... ++|+|++ ..|+++..++ .|.++|...+.....
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~-------~~~~~~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNK-------VTTVHPG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTE-------EEEEEET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCE-------EEEeecc-CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCceeEE
Confidence 4455666654 579999988762 2222222 22233 9999998 5788777765 899999876654334
Q ss_pred e----cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE----eeecCCCCce-EEEEECCCCeEEEEEecCC
Q psy14130 215 I----DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ----GVCHPGTRSS-KAVFIGDTGRIVTTGFSRH 285 (494)
Q Consensus 215 ~----~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~ 285 (494)
+ ......+.+++++|++..|+.+..++.|+.||+.++..... ..++...... .+++.|+++.++++. .
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d---~ 286 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD---Q 286 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE---T
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe---C
Confidence 4 22456788999999555555677789999999987763322 2222222123 899999778999888 7
Q ss_pred CCceEEEEeCCCCCCceeEeeec-------------CCCceEEeEEeCCCCEEEEEEe-CCCcEEEEEeeCCCceEEecc
Q psy14130 286 SDRQVGLWDENDLNTPLALETVD-------------SSSGVLFPYYDHDTRILFLAGK-GDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 286 ~d~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~g~-~dg~i~~wd~~~~~~~~~~~~ 351 (494)
.++.|+.||.... ...+.... .-.....++++|+|+ ||++-. .++.|+.|++.+++. ..+..
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 8899999997642 11111110 013477899999998 558888 899999999877753 22222
Q ss_pred cc-c-----------CCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 352 QS-L-----------SGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 352 ~~-~-----------~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
.. . .-....++++.|++.++++..+.-+|.++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 10 0 01357899999998888886444444433
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.36 E-value=8.1e-11 Score=123.08 Aligned_cols=201 Identities=10% Similarity=-0.019 Sum_probs=131.6
Q ss_pred cccccEEEEEEcCCCCCEEE-----EEeCCCeEEEEECCCCeEEEEecCCCCce--EEEEEcCCCCEEEEEeCCCe----
Q psy14130 174 GHKRRVGYIEWHPTAENVVA-----SAGFDYLIILWDVGKGEALTVIDCHPDVI--NCLSFNRDGSRLVTTCKDKT---- 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~-----s~s~d~~v~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~~~d~~---- 242 (494)
+|...+.+++|||+| ++|| +|+.+..|++||+.+++.+. ..+...+ .+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 466679999999999 5666 34445789999999987641 1122222 68999999999999998776
Q ss_pred ---------EEEEeCCCCc----eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 243 ---------VRVLDPRTGL----VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 243 ---------v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
|++|++.++. ++.....+... +..+.|+|++..+++++........|.+||..+.. ...+. .+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~--~~ 270 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLV--KG 270 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEE--EC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEee--cC
Confidence 9999999876 23233333333 67889999987777776211012367777654432 22222 23
Q ss_pred CCceEEeEEeCCCCEEEEEEe---CCCcEEEEEeeCCCc--eEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 310 SSGVLFPYYDHDTRILFLAGK---GDGNIRYYELTNERP--YIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g~---~dg~i~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
...+....+ +++. +++.+. .++.|.+||+.+++. ...++.. .....+.+++|+ ++.++++. ++..++|.
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-DSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-CSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-CCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 344555556 6777 656654 357899999987653 2333322 123457888998 55555553 78889998
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 347 ~~~ 349 (695)
T 2bkl_A 347 ATL 349 (695)
T ss_dssp EET
T ss_pred EeC
Confidence 874
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.36 E-value=8.2e-09 Score=95.53 Aligned_cols=213 Identities=10% Similarity=0.005 Sum_probs=139.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEE-EecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALT-VIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~h~~~v~~l~~~ 228 (494)
.|..||.. +.. ....+......+.++++.+++ +++++...++.|..+|.. ++... .+......+.+++++
T Consensus 84 ~v~~~d~~-g~~------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 84 KIGKLSKK-GGF------TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp EEEEECTT-SCE------EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred eEEEECCC-CCe------EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 47777765 321 111222234668999999998 688877778899999987 55442 233345678999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
++|+++++...++.|..+|. +++............+..+++.++ +.++++. ...+.|.+||.. .. ........
T Consensus 155 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~i~~~~~~-g~-~~~~~~~~ 227 (300)
T 2qc5_A 155 SDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGND-GALWFVE---IMGNKIGRITTT-GE-ISEYDIPT 227 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECTT-CC-EEEEECSS
T ss_pred CCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCC-CCEEEEc---cCCCEEEEEcCC-Cc-EEEEECCC
Confidence 99997777767889999998 566443211122223678888876 5677776 467789999983 22 22221112
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
....+..++++++|+.+ ++...++.|..||. +++. ..+. .......+.++++.++|.+.++.. . +++.+.
T Consensus 228 ~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~~-~~~~-~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIW-FTEWGANQIGRITN-DNTI-QEYQ-LQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp TTCCEEEEEECSTTCEE-EEETTTTEEEEECT-TSCE-EEEE-CCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred CCCCceEEEECCCCCEE-EeccCCCeEEEECC-CCcE-EEEE-CCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 34567889999998854 77667789999998 4443 2221 111235588999999998777765 3 565544
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=1.2e-10 Score=106.90 Aligned_cols=183 Identities=10% Similarity=0.017 Sum_probs=132.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKA 268 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 268 (494)
++|++++.|+.|.+||.++|+.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+.++..+....+..+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 699999999999999999999999998766 5789999999999888 45788999999 8999988887644346778
Q ss_pred EEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 269 VFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 269 ~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
.+.+++..+++.+ ..++.|..+|.. ++........ ........+...++|+++ ++...++.|..||.. ++
T Consensus 83 ~~~~dG~~lv~~~---~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l-v~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 83 RILPDGNALVAWC---GHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYL-VPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EECTTSCEEEEEE---STTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEE-EEETTTTEEEEECTT-SC
T ss_pred EECCCCCEEEEec---CCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEE-EEecCCCEEEEECCC-CC
Confidence 8888865555544 226778777753 3322222110 011234456788999988 788899999999988 87
Q ss_pred ceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 345 PYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 345 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+.++-. ...+.++.+.+++.++++....-++..++.
T Consensus 157 ~~w~~~~----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 157 LLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp EEEEEEC----SSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred EEEEEEC----CCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 6555432 245667888999988887633334444443
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=1.1e-09 Score=102.49 Aligned_cols=222 Identities=12% Similarity=0.121 Sum_probs=142.1
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEE-ecC----CCCc
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTV-IDC----HPDV 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~----h~~~ 221 (494)
.+.|.+||..++.... +.. ....++...+.+++++++ + +++++.. ...|.+||.. ++.... ... ....
T Consensus 45 ~~~i~~~d~~~g~~~~-~~~--~~~~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTV-ICK--PEVNGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CCEEEEECTTTCCEEE-EEC--CEETTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CCEEEEEeCCCCcEEE-EEe--cccCCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 4568999877663210 000 001235567899999999 6 5555544 4479999998 665433 221 1235
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCceEEEeeecCCCCceEEEEE----CCCCeEEEEEe
Q psy14130 222 INCLSFNRDGSRLVTTCKD---------------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFI----GDTGRIVTTGF 282 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~g~ 282 (494)
+.+++++++|+++++...+ +.|..||.. ++..... .+... ...+++. +++..++++.
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~-~~~i~~~~~~d~dg~~l~v~~- 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQF-PNGIAVRHMNDGRPYQLIVAE- 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESS-EEEEEEEECTTSCEEEEEEEE-
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCC-cceEEEecccCCCCCEEEEEE-
Confidence 8899999999988877665 578888876 5543332 22222 5788899 8865677776
Q ss_pred cCCCCceEEEEeCC-CCCC--ceeEeeecCC--CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCC
Q psy14130 283 SRHSDRQVGLWDEN-DLNT--PLALETVDSS--SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGA 357 (494)
Q Consensus 283 ~~~~d~~i~iwd~~-~~~~--~~~~~~~~~~--~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 357 (494)
..++.|.+||+. +... .......... ..+..++++++|+.+ ++...++.|.+||..+++....+. . ...
T Consensus 195 --~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~-v~~~~~~~i~~~d~~~g~~~~~~~-~--~~~ 268 (314)
T 1pjx_A 195 --TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL-VANWGSSHIEVFGPDGGQPKMRIR-C--PFE 268 (314)
T ss_dssp --TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE-EEEETTTEEEEECTTCBSCSEEEE-C--SSS
T ss_pred --CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE-EEEcCCCEEEEEcCCCCcEeEEEe-C--CCC
Confidence 568899999976 2211 0011222222 457789999999766 777778899999988666543321 1 235
Q ss_pred CeeEEEEecCCc-eeeeccc--eeEEEEeeC
Q psy14130 358 PQRGLGFMPKRG-CDVTQCE--IFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~~~-~~~~~~~--~~~~~~l~~ 385 (494)
.+.+++|+|++. +.++... .+..|++..
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 689999999998 5555544 555555543
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.33 E-value=5.8e-09 Score=96.52 Aligned_cols=215 Identities=10% Similarity=0.014 Sum_probs=145.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|.+||.. +.. ....+..+...+.++++++++ .++++...++.|..||.. ++. ...+......+.++++
T Consensus 36 ~~v~~~d~~-~~~------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKI------TEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCE------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CcEEEEcCC-CCe------EEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEE
Confidence 458888876 421 111222345678999999998 688877778899999986 432 2222234567899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|..||. +++............+..+++.++ +.++++. ..++.|..||. +.. .......
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~ 179 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD-NALWFTE---NQNNAIGRITE-SGD-ITEFKIP 179 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SCEEEEE---TTTTEEEEECT-TCC-EEEEECS
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC-CCEEEEe---CCCCEEEEEcC-CCc-EEEeeCC
Confidence 999998888878899999999 565433222212233778888877 5777776 46789999998 432 2222111
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.....+..++++++++.+ ++...++.|.+||. +++. ..+ ........+.++++.|++.+.++. ++.+..|+.
T Consensus 180 ~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~~~-~g~~-~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALW-FVEIIGNKIGRITT-SGEI-TEF-KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCCE-EEE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCcceeEEECCCCCEE-EEccCCceEEEECC-CCcE-EEE-ECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 233567889999998855 77667889999998 6653 222 111123568999999999887774 556666665
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.33 E-value=1e-09 Score=115.65 Aligned_cols=218 Identities=15% Similarity=0.078 Sum_probs=136.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC--------------eEEEEECCCCeE--EE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY--------------LIILWDVGKGEA--LT 213 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~--------------~v~iwd~~~~~~--~~ 213 (494)
+|++||+.++.. +.. ..+...+..++|+|+ . .|+.++.|+ .|++|++.++.. ..
T Consensus 190 ~i~v~dl~tg~~-------~~~-~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l 259 (741)
T 1yr2_A 190 TVKFVGVADGKP-------LAD-ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP 259 (741)
T ss_dssp EEEEEETTTCCE-------EEE-EEEEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE
T ss_pred EEEEEECCCCCC-------CCc-cCCCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE
Confidence 599999998832 221 112222357899999 5 555555544 399999987652 22
Q ss_pred Eec--CCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC--ceEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 214 VID--CHPDVINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTG--LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 214 ~~~--~h~~~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
.+. .+...+.++.|+|||++|+..+.++ .|++||+.++ +....+..+... .... +.++++.++..+-..
T Consensus 260 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~ 337 (741)
T 1yr2_A 260 VFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-QWDF-VDGVGDQLWFVSGDG 337 (741)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS-CEEE-EEEETTEEEEEECTT
T ss_pred EeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc-eEEE-EeccCCEEEEEECCC
Confidence 333 3444688999999999988877544 8999999877 314555555544 3333 347777787776211
Q ss_pred CCCceEEEEeCCCCC-CceeEeeecCC-CceEEeEEeCCCCEEEEEEeCCCcEEEEEee-CCCceEEecccccCCCCeeE
Q psy14130 285 HSDRQVGLWDENDLN-TPLALETVDSS-SGVLFPYYDHDTRILFLAGKGDGNIRYYELT-NERPYIHFLNQSLSGAPQRG 361 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~v~~ 361 (494)
..++.|.+||+.+.. ....+ ..+. ..+..+.++ +..++++...|+..++|.+. +++.. ..+. ......+.+
T Consensus 338 ~~~~~l~~~d~~~~~~~~~~l--~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~-~~l~-~~~~~~v~~ 411 (741)
T 1yr2_A 338 APLKKIVRVDLSGSTPRFDTV--VPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPA-GAVS-LPGIGSASG 411 (741)
T ss_dssp CTTCEEEEEECSSSSCEEEEE--ECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEE-EECB-CSSSCEEEE
T ss_pred CCCCEEEEEeCCCCccccEEE--ecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCce-eecc-CCCCeEEEE
Confidence 235679999987642 11112 2232 334456665 55666888899998888776 34432 2222 222456889
Q ss_pred EEEecCCceeee------ccceeEEEEeeC
Q psy14130 362 LGFMPKRGCDVT------QCEIFRFFKLHT 385 (494)
Q Consensus 362 ~~~~p~~~~~~~------~~~~~~~~~l~~ 385 (494)
++++|++..++. ....+.+|++.+
T Consensus 412 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 412 LSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred eecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 999998875542 145677777655
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=2.5e-09 Score=102.50 Aligned_cols=212 Identities=8% Similarity=-0.050 Sum_probs=134.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe----------CCCeEEEEECCCCeEEEEecCC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG----------FDYLIILWDVGKGEALTVIDCH- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h- 218 (494)
.|.++|..++ +.+..+.....+ .++++|++ +.|+.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~-------~~~~~i~~g~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSG-------SILGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCC-------eEEEEecCCCCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC
Confidence 6899999887 334444433333 89999999 5666554 3678999999988877766422
Q ss_pred ------CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCC--
Q psy14130 219 ------PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-- 287 (494)
Q Consensus 219 ------~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-- 287 (494)
......+.|+|||++|+.+.. ++.|.++| .+++.+.. +.... ++.+.+++.+.+++. +.|
T Consensus 118 ~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~~~~~~---~~dg~ 188 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPSTFYLL---CAQGG 188 (373)
T ss_pred ccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCceEEEE---cCCCC
Confidence 133568999999999998874 57899999 99988777 53211 112222222222222 233
Q ss_pred ---------------------------------------------ceEEEEeCCCCCCceeEeeec-----------CCC
Q psy14130 288 ---------------------------------------------RQVGLWDENDLNTPLALETVD-----------SSS 311 (494)
Q Consensus 288 ---------------------------------------------~~i~iwd~~~~~~~~~~~~~~-----------~~~ 311 (494)
+.+.+.|+....... ...+. ...
T Consensus 189 ~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~~p~ 267 (373)
T 2mad_H 189 LAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN-KAPIDALSGGRKADTWRPG 267 (373)
T ss_pred EEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE-eeeeeecCCcccccceecC
Confidence 344444443221100 00000 012
Q ss_pred ceEEeEEeCCCCEEEEEEe---------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--ccee
Q psy14130 312 GVLFPYYDHDTRILFLAGK---------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIF 378 (494)
Q Consensus 312 ~v~~~~~~~~~~~l~~~g~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~ 378 (494)
+...+.++|+++.+|++.. .++.|.++|+.+.+.+..+ ..+....+++|+||+. .+++ . ++.+
T Consensus 268 g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i----~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 268 GWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI----SLGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred ceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE----ECCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 2334778999999988754 2467999999998765443 2244689999999988 4444 2 6788
Q ss_pred EEEEeeC
Q psy14130 379 RFFKLHT 385 (494)
Q Consensus 379 ~~~~l~~ 385 (494)
.++++.+
T Consensus 344 ~ViD~~t 350 (373)
T 2mad_H 344 HIYDAGA 350 (373)
T ss_pred EEEECCC
Confidence 8898877
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.30 E-value=5.7e-10 Score=112.59 Aligned_cols=188 Identities=13% Similarity=0.012 Sum_probs=143.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCceEEEeeecCCCCceE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR--TGLVISQGVCHPGTRSSK 267 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~ 267 (494)
.++++...++.|.++|..+++.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+.++..... ...
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~--P~~ 244 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE--ARS 244 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE--EEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC--Cce
Confidence 5777888899999999999999888873 4467799999999999999999999999996 7888877765433 578
Q ss_pred EEEE----CCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec---------CCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 268 AVFI----GDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD---------SSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 268 ~~~~----~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
++++ |++.+++++. ..+++|.++|..+.+....+.... ....+..+..++++..++++...+|.
T Consensus 245 ia~s~~~~pDGk~l~v~n---~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGA---YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEECCSTTCTTTEEEEEE---EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred eEEccccCCCCCEEEEEE---ccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 8999 5877888887 478999999988755433222111 02256778889998888788888899
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec---cceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~---~~~~~~~~l~~ 385 (494)
|.++|....+.+. ...........++.|+|++.+++.. +..+.++++.+
T Consensus 322 v~~vd~~~~~~~~--v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 322 ILLVDYTDLNNLK--TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEEETTCSSEEE--EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEecCCCccce--eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 9999988765322 2223334567889999999876542 67788888876
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=5.6e-08 Score=89.85 Aligned_cols=215 Identities=7% Similarity=-0.034 Sum_probs=143.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~ 227 (494)
+.|.+|+.. +... ...+..+...+.++++.+++ +++++...++.|..+|.. ++.. ..+......+.++++
T Consensus 41 ~~v~~~~~~-~~~~------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIK------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEE------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CceE------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 468888876 4211 11223344678999999998 677777778899999987 5543 223334567899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+++|+++++...++.|..+|.. ++............+..+++.++ +.++++. ..++.|..+|. +.. .......
T Consensus 112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~---~~~~~i~~~~~-~g~-~~~~~~~ 184 (300)
T 2qc5_A 112 GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD-NALWFTE---NQNNSIGRITN-TGK-LEEYPLP 184 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SSEEEEE---TTTTEEEEECT-TCC-EEEEECS
T ss_pred CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC-CCEEEEe---cCCCeEEEECC-CCc-EEEeeCC
Confidence 9999988887778899999988 66442222212233778888887 4577766 46788999998 322 2222211
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.....+..++++++++.+ ++....+.|.+||. +++....... .....+.++++.+++.+.++. ++.+..|+.
T Consensus 185 ~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 185 TNAAAPVGITSGNDGALW-FVEIMGNKIGRITT-TGEISEYDIP--TPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCCEEEEECS--STTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCcceEEECCCCCEE-EEccCCCEEEEEcC-CCcEEEEECC--CCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 233567889999998655 77666778999998 5543222121 123568899999999887776 455666654
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=5.4e-09 Score=101.60 Aligned_cols=198 Identities=13% Similarity=0.058 Sum_probs=135.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK--TVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~ 254 (494)
.....|+|++++ +++++...++.|++||+.++........ ..... ++|+++++.|+++..++ .|.++|...+...
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 357899999998 6888887789999999988876655554 33344 99999999999988866 8999998776543
Q ss_pred EEe---eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCce--E-EeEEeCCCCEEE
Q psy14130 255 SQG---VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGV--L-FPYYDHDTRILF 326 (494)
Q Consensus 255 ~~~---~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v--~-~~~~~~~~~~l~ 326 (494)
..+ ..+....+..+++.|+++.++++. .++.|+.||..+... ..+.. ....... . .++|+|++..||
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d----~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVD----SNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEEC----TTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEE----CCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 333 121223367889999668888844 688999999876432 11211 1111112 2 899999877887
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccc------------cCCCCeeEEEEecCCceeeecc-ceeEEEEee
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQS------------LSGAPQRGLGFMPKRGCDVTQC-EIFRFFKLH 384 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~------------~~~~~v~~~~~~p~~~~~~~~~-~~~~~~~l~ 384 (494)
++...++.|+.|+.... ...+.... ..-....+++++|++.+.++.. +.-+|+.+.
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 99888999999987643 12222111 0013478999999999888765 444555544
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=1.2e-08 Score=94.58 Aligned_cols=199 Identities=10% Similarity=0.007 Sum_probs=129.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC----CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC----HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----h~~~v~~ 224 (494)
+.|..||..++.. ..+ .....+.+++++++| +++++ . +..|.+||..+++....... ....+..
T Consensus 35 ~~i~~~d~~~~~~--------~~~-~~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 35 KKVCRWDSFTKQV--------QRV-TMDAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp TEEEEEETTTCCE--------EEE-ECSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred CEEEEEECCCCcE--------EEE-eCCCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 3688999876621 122 244679999999998 55554 3 56899999988865433321 1245789
Q ss_pred EEEcCCCCEEEEEeCC-----------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 225 LSFNRDGSRLVTTCKD-----------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 225 l~~~~~~~~l~s~~~d-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
++++|+|+++++...+ +.|..+|.. ++... +..+... ...++|+|++..++++. +.++.|.+|
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~-pngi~~spdg~~lyv~~---~~~~~i~~~ 176 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDI-SNGLDWSLDHKIFYYID---SLSYSVDAF 176 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESB-EEEEEECTTSCEEEEEE---GGGTEEEEE
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-Eeecccc-ccceEEcCCCCEEEEec---CCCCcEEEE
Confidence 9999999977765322 344444543 33322 2222222 67899999977788887 678899999
Q ss_pred eCC--CCCCc--eeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cC
Q psy14130 294 DEN--DLNTP--LALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PK 367 (494)
Q Consensus 294 d~~--~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~ 367 (494)
|+. ++... ..+.... ....+..++++++|+.. ++...++.|..||..+++.+..+. . ....+++++|. |+
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw-va~~~~~~v~~~d~~tG~~~~~i~-~--p~~~~t~~~f~g~d 252 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW-VACYNGGRVIRLDPVTGKRLQTVK-L--PVDKTTSCCFGGKN 252 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE-EEEETTTEEEEECTTTCCEEEEEE-C--SSSBEEEEEEESGG
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE-EEEcCCCEEEEEcCCCceEEEEEE-C--CCCCceEEEEeCCC
Confidence 874 32211 1111111 22456788999999755 777778889999998887643332 1 12468999998 77
Q ss_pred Cc
Q psy14130 368 RG 369 (494)
Q Consensus 368 ~~ 369 (494)
+.
T Consensus 253 ~~ 254 (297)
T 3g4e_A 253 YS 254 (297)
T ss_dssp GC
T ss_pred CC
Confidence 65
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.19 E-value=1.8e-08 Score=94.07 Aligned_cols=189 Identities=9% Similarity=0.086 Sum_probs=119.9
Q ss_pred cEEEEEE-cCcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCC---------------CeEEE
Q psy14130 141 GAFLVLP-IHRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFD---------------YLIIL 203 (494)
Q Consensus 141 g~~~~~~-~~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d---------------~~v~i 203 (494)
|.+.+.. .+.|.+||.. +.... +. ..... .....+.+++++++| +++++...+ +.|..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~-~~--~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEE-IA--KKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEE-CC--SBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CcEEEEECCCCEEEEeCC-CCEEE-EE--eccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEE
Confidence 3444433 2358888877 53210 00 00011 122457899999998 677776655 56777
Q ss_pred EECCCCeEEEEecCCCCceEEEEEc----CCCCEEEEE-eCCCeEEEEeCC-CCce-----EEEeeecCCCCceEEEEEC
Q psy14130 204 WDVGKGEALTVIDCHPDVINCLSFN----RDGSRLVTT-CKDKTVRVLDPR-TGLV-----ISQGVCHPGTRSSKAVFIG 272 (494)
Q Consensus 204 wd~~~~~~~~~~~~h~~~v~~l~~~----~~~~~l~s~-~~d~~v~iwd~~-~~~~-----~~~~~~~~~~~~~~~~~~~ 272 (494)
||.. ++..... .+......++|+ ++++.|+.+ ..++.|.+||+. +++. ...+..+....+..+++.+
T Consensus 158 ~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 158 FTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 7775 5443332 234457889999 999765555 568899999986 4542 2222222202267788888
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
+ +.++++. ..++.|.+||..+........ .+...+.+++++|+++.|+++...++.|..|++..
T Consensus 236 ~-G~l~v~~---~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 236 D-NNLLVAN---WGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp T-CCEEEEE---ETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred C-CCEEEEE---cCCCEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7 4666665 367899999987544332222 13367889999999998878887888999999875
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.16 E-value=7.8e-10 Score=105.28 Aligned_cols=170 Identities=10% Similarity=-0.002 Sum_probs=120.8
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCC-----CCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGG-----LSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL 212 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~-----~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~ 212 (494)
+..|.+++.+.+.+.+|++.+.. ....+ ++... ..+.. |+.++| ++ ++|+++ .++.|++||+.+....
T Consensus 47 ~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~-~~~~~-~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~~ 119 (388)
T 1xip_A 47 NSKSLFVAASGSKAVVGELQLLRDHITSDSTPL-TFKWE-KEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSEF 119 (388)
T ss_dssp TTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCC-CCSEE-EECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTCE
T ss_pred CCCCEEEEeCCCEEEEEEhhHhhhhhccccccc-cceEE-eeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhcc
Confidence 45667777777789999975432 00001 22122 23566 999999 66 788888 7899999999876665
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.....|...+.++.+.+.. +++++.||.|.+||+.++.... +... +.+++|+|++ + +.| ..||.+++
T Consensus 120 ~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~-Vs~v~WSpkG--~-~vg---~~dg~i~~ 186 (388)
T 1xip_A 120 RTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQN-VTSFDVTNSQ--L-AVL---LKDRSFQS 186 (388)
T ss_dssp EEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEES-EEEEEECSSE--E-EEE---ETTSCEEE
T ss_pred CccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCC-ceEEEEcCCc--e-EEE---EcCCcEEE
Confidence 6666788889998887653 8889999999999999887643 2223 8999999995 3 445 47999999
Q ss_pred EeCCCCCC--ceeEe-------eecCCCceEEeEEeCCCCEEEE
Q psy14130 293 WDENDLNT--PLALE-------TVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 293 wd~~~~~~--~~~~~-------~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
|+...... ...+. ..++...|.++.|.+++.++++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 98765431 11110 1125678999999999998844
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.16 E-value=6.3e-09 Score=108.58 Aligned_cols=184 Identities=12% Similarity=0.061 Sum_probs=119.4
Q ss_pred cEEEEEcCCCCCCCCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeC---CCeEEEEECCCCe-EEEEecCCCCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGF---DYLIILWDVGKGE-ALTVIDCHPDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~---d~~v~iwd~~~~~-~~~~~~~h~~~v~~ 224 (494)
+|.+|++.++.... ..+..... |...+.++.|+|+|..++++.+. +..|.++|+.++. ....+..+......
T Consensus 209 ~v~~~~lgt~~~~~---~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 209 KVYFHRLGTAQEDD---RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp EEEEEETTSCGGGC---EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred EEEEEECCCCcccc---eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 58999988763210 12223334 55567899999999544455543 2589999997763 45556666666666
Q ss_pred EEEcCCCCEEEEEe-CC---CeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCC
Q psy14130 225 LSFNRDGSRLVTTC-KD---KTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDEN 296 (494)
Q Consensus 225 l~~~~~~~~l~s~~-~d---~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~ 296 (494)
. |+++|..|+..+ .+ +.|..+|+.++.. ...+..|... +. .|+++++.++.+. ..++ .|++||+.
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s~~g~~lv~~~---~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVHSGSGYLFAEY---MVDATARVEQFDYE 358 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEEEETTEEEEEE---EETTEEEEEEECTT
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEEEECCEEEEEE---EECCeeEEEEEECC
Confidence 5 666666555444 33 6899999988764 3456666655 33 7888877777776 3454 68899987
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC---CcEEEEEeeCCCc
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD---GNIRYYELTNERP 345 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d---g~i~~wd~~~~~~ 345 (494)
.. . ......+....+..+.++++++.++++.+.. +.|+.||+.+++.
T Consensus 359 g~-~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 GK-R-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SC-E-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CC-e-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 42 2 2222233445577788889998886655432 7899999887763
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=8.4e-09 Score=99.58 Aligned_cols=219 Identities=9% Similarity=-0.029 Sum_probs=139.8
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
.|.+.|..+. +.+.++.--..+ .++++|++..++++.. .++.|.++|..+++.+..+.-.
T Consensus 100 ~VsVID~~t~-------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~ 170 (426)
T 3c75_H 100 QQFVIDGSTG-------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA 170 (426)
T ss_dssp EEEEEETTTT-------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred eEEEEECCCC-------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc
Confidence 6899999888 445555433444 8999999954444432 4678999999999988777521
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCC------CCceEEEEECC------------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPG------TRSSKAVFIGD------------ 273 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~------------ 273 (494)
......+.|+|||++++.+.. ++.|.+.|+.+++.+.++..... .....+.++++
T Consensus 171 ~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 171 PRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 234567899999999998874 58999999999998777653110 00111223333
Q ss_pred -------------------------CCeEEEEEecCCCCceEEEEeCCCCCCce--eEeee-----c---CCCceEEeEE
Q psy14130 274 -------------------------TGRIVTTGFSRHSDRQVGLWDENDLNTPL--ALETV-----D---SSSGVLFPYY 318 (494)
Q Consensus 274 -------------------------~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~-----~---~~~~v~~~~~ 318 (494)
++.++.+. ..+.|.+.|+....... ..... . ...+...+++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s----~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~ 326 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT----YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAY 326 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB----TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEE
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEe----CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEE
Confidence 22223222 23455555554321000 00000 0 0011223689
Q ss_pred eCCCCEEEEEEeC---------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--cceeEEEEeeC
Q psy14130 319 DHDTRILFLAGKG---------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIFRFFKLHT 385 (494)
Q Consensus 319 ~~~~~~l~~~g~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~~~~~l~~ 385 (494)
+|+++.+|++... ++.|.++|+.+.+.+.++.. +....+++|+||+. .+++ . ++.+.++|+.+
T Consensus 327 s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 327 HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred cCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 9999999887532 35799999999987554422 33589999999987 5544 3 78899999887
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.12 E-value=1.1e-08 Score=107.72 Aligned_cols=203 Identities=11% Similarity=-0.025 Sum_probs=126.7
Q ss_pred cccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCe------
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKT------ 242 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~------ 242 (494)
+|...+..++|||+| +.||.++.+ ..|++||+.+++.+.... +...+.+++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccc
Confidence 344578899999999 566665543 469999999998654321 2222357899999 99988887654
Q ss_pred --------EEEEeCCCCce--EEEeeecCC-CCceEEEEECCCCeEEEEEecCC-CCceEEEEeCCCCC-C-ceeEeeec
Q psy14130 243 --------VRVLDPRTGLV--ISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRH-SDRQVGLWDENDLN-T-PLALETVD 308 (494)
Q Consensus 243 --------v~iwd~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~-~d~~i~iwd~~~~~-~-~~~~~~~~ 308 (494)
|++|++.++.. ...+..... .....+.|+|++..++.++.... ....|++||+.+.. . ...+. .
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~ 314 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--P 314 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--C
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--C
Confidence 89999987762 222222221 12678899999777777662110 24589999987651 1 22222 2
Q ss_pred CCCceEEeEEeCCCCEEEEEEeC---CCcEEEEEeeCCC-ceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEE
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKG---DGNIRYYELTNER-PYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFK 382 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~---dg~i~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~ 382 (494)
........ ++|+++.|++.... ++.|.+||+.++. ....++... ...+.+++|. ++.++++ .++..++|.
T Consensus 315 ~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 315 DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES--KDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC--SSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC--CCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 33334444 45899988665533 3459999988752 333444332 3356778888 4444444 378888888
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
+..
T Consensus 391 ~~~ 393 (741)
T 1yr2_A 391 FDL 393 (741)
T ss_dssp EET
T ss_pred EeC
Confidence 774
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=2.7e-08 Score=92.71 Aligned_cols=203 Identities=10% Similarity=0.020 Sum_probs=132.1
Q ss_pred cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 172 LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 172 ~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
+..+........|+|++..++++...++.|..|+. +++ ...+..+...+.+++++++|+++++...++.|.+||.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 33345567789999998547888888999999998 454 34455566789999999999977766667899999986 6
Q ss_pred ceEEEeeecC---CCCceEEEEECCCCeEEEE----EecC----------CCCceEEEEeCCCCCCceeEeeecCCCceE
Q psy14130 252 LVISQGVCHP---GTRSSKAVFIGDTGRIVTT----GFSR----------HSDRQVGLWDENDLNTPLALETVDSSSGVL 314 (494)
Q Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~----g~~~----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 314 (494)
+......... ...+..+++.++ +.++++ |... ...+.|..||..+....... ......
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~ 191 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPN 191 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCCCc
Confidence 5322211111 112567888888 556664 3000 01356788887554332221 223467
Q ss_pred EeEEeCCCCEEEEEEeC-----CCcEEEEEeeCCCce-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 315 FPYYDHDTRILFLAGKG-----DGNIRYYELTNERPY-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~-----dg~i~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
.++|+||++.|+++.+. .+.|.+|++..+... ....... ......++++.++|.+.++..+.+.+|+.
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~~~~gv~~~~~ 265 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLWSSSGTGVCVFDS 265 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEEECCSSEEEEECT
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEEEecCCcEEEECC
Confidence 78999999988776654 378999999865410 0111111 13346789999999987776555666665
No 212
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=2e-08 Score=95.95 Aligned_cols=217 Identities=15% Similarity=0.011 Sum_probs=140.7
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc------c-ccccEEEEEEcCCCCCEEEEEeCC------CeEEEEECCCCeEEEEe
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH------G-HKRRVGYIEWHPTAENVVASAGFD------YLIILWDVGKGEALTVI 215 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~------~-h~~~V~~~~~~p~~~~~l~s~s~d------~~v~iwd~~~~~~~~~~ 215 (494)
++|.++|+.+....- +...+++ . ....-..+...|+| +++++..+ +.|.+.|..+.+.+.++
T Consensus 106 ~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~ 180 (462)
T 2ece_A 106 SRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKW 180 (462)
T ss_dssp CCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEEC
T ss_pred CeEEEEECCCCCCCc---eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE
Confidence 369999987542211 2222221 0 11234567788997 66676655 78999999999999888
Q ss_pred cCCC---CceEEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceEEEeeec-CCCCceEEEE--
Q psy14130 216 DCHP---DVINCLSFNRDGSRLVTTC-------------------KDKTVRVLDPRTGLVISQGVCH-PGTRSSKAVF-- 270 (494)
Q Consensus 216 ~~h~---~~v~~l~~~~~~~~l~s~~-------------------~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~-- 270 (494)
.... ..-+.+.|+|+++.+++.. .+.+|.+||+.+++.++++... .+.....+.|
T Consensus 181 ~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~ 260 (462)
T 2ece_A 181 EIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLH 260 (462)
T ss_dssp CSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECS
T ss_pred ccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeE
Confidence 6321 2245688999999888885 3689999999999888887653 2222344545
Q ss_pred ECCCCeEEEEEecCC-----CCceEEEEeCCCCCCceeEee--ecC-----------------CCceEEeEEeCCCCEEE
Q psy14130 271 IGDTGRIVTTGFSRH-----SDRQVGLWDENDLNTPLALET--VDS-----------------SSGVLFPYYDHDTRILF 326 (494)
Q Consensus 271 ~~~~~~l~~~g~~~~-----~d~~i~iwd~~~~~~~~~~~~--~~~-----------------~~~v~~~~~~~~~~~l~ 326 (494)
+|++...+++. . .+++|.+|....+. ...... +.. ......+.+++||++||
T Consensus 261 ~Pdg~~aYV~~---e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 261 DPTKLMGFINM---VVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp STTCCEEEEEE---EEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred CCCCCEEEEEE---eeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 88876666666 4 56788776544311 000010 000 23466789999999999
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecccccCC---------------CCeeEEEEecCCceeeecc
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLNQSLSG---------------APQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~~~~~~ 375 (494)
++.-..+.|.+||+..... .+.+.....+ ...+.++++|||..+...+
T Consensus 337 VSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999964321 1222222212 1358899999998766554
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.07 E-value=6.7e-08 Score=91.59 Aligned_cols=223 Identities=10% Similarity=0.033 Sum_probs=144.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccc-------cccEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCC
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGH-------KRRVGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHP 219 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h-------~~~V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~ 219 (494)
+.|.+||..+.+ .+.++.-. ...-..++|+|+| ++|+.+.. ++.|.++|+.+++.+.++...
T Consensus 109 ~~VsviD~~t~~-------v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~vv~tI~v~- 179 (386)
T 3sjl_D 109 DYVEVFDPVTLL-------PTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP- 179 (386)
T ss_dssp EEEEEECTTTCC-------EEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEEEEEEECC-
T ss_pred CEEEEEECCCCe-------EEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcEEEEEECC-
Confidence 469999999884 33333211 1134578999999 56665543 689999999999999888632
Q ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceEEEeeecC----CCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 220 DVINCLSFNRDGSRLVTTCKDKTVRVLDPRT-GLVISQGVCHP----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
+ . ...+....+.+++.+.||++.+.++.+ ++.......+. ........|.+.+++++... .+++|.+.|
T Consensus 180 g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs----~~g~V~v~d 253 (386)
T 3sjl_D 180 D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT----YTGKIHQID 253 (386)
T ss_dssp S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB----TTSEEEEEE
T ss_pred C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe----CCCEEEEEE
Confidence 2 1 233433566788889999999999986 66533221111 11112246665557776666 579999999
Q ss_pred CCCCCCceeEeeec-----------CCCceEEeEEeCCCCEEEEEEeC---------CCcEEEEEeeCCCceEEeccccc
Q psy14130 295 ENDLNTPLALETVD-----------SSSGVLFPYYDHDTRILFLAGKG---------DGNIRYYELTNERPYIHFLNQSL 354 (494)
Q Consensus 295 ~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~g~~---------dg~i~~wd~~~~~~~~~~~~~~~ 354 (494)
+.+.... ....+. ...+...++++++++.+|++-.. .+.|.++|+.+.+.+.++..
T Consensus 254 ~~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--- 329 (386)
T 3sjl_D 254 LSSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--- 329 (386)
T ss_dssp CTTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---
T ss_pred CCCCcce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC---
Confidence 8754321 111110 01233457789999999887532 25799999999987655433
Q ss_pred CCCCeeEEEEecCCc-e-eeec--cceeEEEEeeCCCCeEEE
Q psy14130 355 SGAPQRGLGFMPKRG-C-DVTQ--CEIFRFFKLHTTRNMCEP 392 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~-~-~~~~--~~~~~~~~l~~~~~~~~~ 392 (494)
+..+.+++++||+. . +++. ++.+.+++..+.+ .+..
T Consensus 330 -g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k-~~~~ 369 (386)
T 3sjl_D 330 -GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE-ELRS 369 (386)
T ss_dssp -EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC-EEEE
T ss_pred -CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc-EEEE
Confidence 34688999999986 4 4433 7889999988733 4443
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.07 E-value=1.7e-07 Score=86.85 Aligned_cols=204 Identities=8% Similarity=0.013 Sum_probs=130.2
Q ss_pred ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE
Q psy14130 175 HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 175 h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 254 (494)
+..--.+..|+|++..++++...++.|..||..+++. ..+. ....+.+++++++|+++++. ++.|.+||..+++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 3344568899997656888888889999999987764 3343 45789999999999965553 568999999888743
Q ss_pred EEeeec---CCCCceEEEEECCCCeEEEEEecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 255 SQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 255 ~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
...... ....+..+++.+++ +++++...... ...-.||.+......... .........++|+||++.|
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY--FDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE--EEEESBEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEE--eeccccccceEEcCCCCEE
Confidence 322221 11235678888885 45554421110 122344444322222111 1223456789999999999
Q ss_pred EEEEeCCCcEEEEEee--CCCceE-Eecccc-cCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELT--NERPYI-HFLNQS-LSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~--~~~~~~-~~~~~~-~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
|++.+.++.|.+||+. ++.... +.+..+ .......++++.++|.+.++. ++.+..|+..+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 8998889999999984 454211 111111 123457899999999887775 45566666553
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.06 E-value=2.5e-08 Score=94.57 Aligned_cols=195 Identities=12% Similarity=-0.012 Sum_probs=127.1
Q ss_pred cccccEEEEEEcCCCCCEEEEEeC-----CCeEEEEECCCCeEEEEecCC------CCceEEEEEcCCCCE-EEEEe---
Q psy14130 174 GHKRRVGYIEWHPTAENVVASAGF-----DYLIILWDVGKGEALTVIDCH------PDVINCLSFNRDGSR-LVTTC--- 238 (494)
Q Consensus 174 ~h~~~V~~~~~~p~~~~~l~s~s~-----d~~v~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~-l~s~~--- 238 (494)
+|-..+.++++++++ +++++-.. ++.|.+||+.+++.+..+... ...+..+++++++.. +++..
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 466789999999997 56665433 578999999999877766532 245689999986544 45554
Q ss_pred CCCeEEEEeCCCCceEEEeeecCC----------------------------CCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 239 KDKTVRVLDPRTGLVISQGVCHPG----------------------------TRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 239 ~d~~v~iwd~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
.++.|.+||+.+++....+..|.. ..+..+++++++..++++. ...+.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~---~~~~~l 219 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP---MHSTSM 219 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE---SSCSEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe---CCCCeE
Confidence 678999999998886655533210 1146788999876777766 444566
Q ss_pred EEEeCC---CCCCc-----eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEE
Q psy14130 291 GLWDEN---DLNTP-----LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 291 ~iwd~~---~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~ 362 (494)
..++.. ..... ..+...........++++++|..+ ++...++.|.+||..+++. .... .......+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~-va~~~~~~V~~~d~~~G~~-~~~~-~~~~~~~p~~v 296 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIY-VGDLAHSAIGVITSADRAY-KLLV-TDEKLSWTDSF 296 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEE-EEEGGGTEEEEEETTTTEE-EEEE-ECGGGSCEEEE
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEE-EEccCCCeEEEEECCCCCE-EEEE-ECCceecCCee
Confidence 666532 11100 001111122345568899998755 8888899999999855542 2222 11123457899
Q ss_pred EEecCCceeeecc
Q psy14130 363 GFMPKRGCDVTQC 375 (494)
Q Consensus 363 ~~~p~~~~~~~~~ 375 (494)
+|.|++.+.++..
T Consensus 297 a~~~~g~l~v~~~ 309 (343)
T 2qe8_A 297 NFGSDGYLYFDCN 309 (343)
T ss_dssp EECTTSCEEEEEC
T ss_pred EECCCCcEEEEeC
Confidence 9999987776654
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.05 E-value=4.9e-08 Score=101.85 Aligned_cols=217 Identities=9% Similarity=0.026 Sum_probs=134.8
Q ss_pred cEEEEEcCCCCCCCCcccceEeccccccc--EEEEEEcCCCCCEEEEEeCCC-------------eEEEEECCCCeE--E
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRR--VGYIEWHPTAENVVASAGFDY-------------LIILWDVGKGEA--L 212 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~~~~~~p~~~~~l~s~s~d~-------------~v~iwd~~~~~~--~ 212 (494)
.|++||+.+++ .+.. +... ...++|+ ++ +.|+.++.+. .|++|++.++.. .
T Consensus 156 ~i~v~dl~tg~-------~~~~---~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 223 (693)
T 3iuj_A 156 EIHLMDVESKQ-------PLET---PLKDVKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR 223 (693)
T ss_dssp EEEEEETTTCS-------EEEE---EEEEEESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE
T ss_pred EEEEEECCCCC-------CCcc---ccCCceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccce
Confidence 59999999983 2221 2222 3578899 98 5676666663 499999987642 2
Q ss_pred EEe--cC-CCCceEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc-eEEEeeecCCCCceEEEEECCCCeEEEEEecC
Q psy14130 213 TVI--DC-HPDVINCLSFNRDGSRLVTTCK----DKTVRVLDPRTGL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR 284 (494)
Q Consensus 213 ~~~--~~-h~~~v~~l~~~~~~~~l~s~~~----d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 284 (494)
..+ .. |...+.++.|+|||++|+.... +..|+++|+.++. ....+..+... .... +.++++.++..+-..
T Consensus 224 ~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-~~~~-~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 224 LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-DVSL-VDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-CEEE-EEEETTEEEEEECTT
T ss_pred EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-eEEE-EeccCCEEEEEECCC
Confidence 233 33 4556789999999998765442 3589999998774 34555555554 3333 667778888777211
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC--cEEEEEeeCCCceEEecccccCCCCeeEE
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG--NIRYYELTNERPYIHFLNQSLSGAPQRGL 362 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~v~~~ 362 (494)
...+.|..+|+.+.....-.....+...+. .|+++++.|+++...++ .|++||+..+.. ..+. ......+..+
T Consensus 302 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~--~~l~-~p~~~~~~~~ 376 (693)
T 3iuj_A 302 APNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV--REVA-LPGLGSVSGF 376 (693)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE--EEEC-CSSSSEEEEC
T ss_pred CCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee--EEee-cCCCceEEee
Confidence 124689999998754311111223444454 89999999977766666 578888775432 2221 1223456777
Q ss_pred EEecCCceeeec--c----ceeEEEEeeC
Q psy14130 363 GFMPKRGCDVTQ--C----EIFRFFKLHT 385 (494)
Q Consensus 363 ~~~p~~~~~~~~--~----~~~~~~~l~~ 385 (494)
.++|++..++.. + ..+..|++..
T Consensus 377 ~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 377 NGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp CCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred ecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 788877654432 2 4555555544
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=2.3e-07 Score=87.25 Aligned_cols=198 Identities=12% Similarity=0.051 Sum_probs=126.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC----CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC----HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~----h~~~v~~ 224 (494)
+.|..||..++. . ..+. ....+.+++|+|++ +++++. .+ .|.+||..+++....... ....+.+
T Consensus 71 ~~i~~~d~~~~~-------~-~~~~-~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~ 138 (326)
T 2ghs_A 71 RELHELHLASGR-------K-TVHA-LPFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSND 138 (326)
T ss_dssp TEEEEEETTTTE-------E-EEEE-CSSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred CEEEEEECCCCc-------E-EEEE-CCCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCC
Confidence 468889887652 1 1122 34579999999998 566654 44 599999988775433221 1236889
Q ss_pred EEEcCCCCEEEEEeC------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC--
Q psy14130 225 LSFNRDGSRLVTTCK------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-- 296 (494)
Q Consensus 225 l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-- 296 (494)
++++|+|+++++... .+.|..+| +++.. .+..+... ...++|++++..++++. ..++.|.+||+.
T Consensus 139 i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~-~~~i~~s~dg~~lyv~~---~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 139 GRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISI-PNSICFSPDGTTGYFVD---TKVNRLMRVPLDAR 211 (326)
T ss_dssp EEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESS-EEEEEECTTSCEEEEEE---TTTCEEEEEEBCTT
T ss_pred EEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcc-cCCeEEcCCCCEEEEEE---CCCCEEEEEEcccc
Confidence 999999997776543 24566666 45533 23222222 67889999977777777 567899999985
Q ss_pred CC-CC--ceeEeeec-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCce
Q psy14130 297 DL-NT--PLALETVD-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGC 370 (494)
Q Consensus 297 ~~-~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~ 370 (494)
++ .. ...+.... ....+..++++++|... ++...++.|..||. +++.+..+ .. ....+.+++|. |++..
T Consensus 212 ~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw-va~~~~~~v~~~d~-~g~~~~~i-~~--~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 212 TGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGNHIARY-EV--PGKQTTCPAFIGPDASR 285 (326)
T ss_dssp TCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCCEEEEE-EC--SCSBEEEEEEESTTSCE
T ss_pred cCCcccCceEEEECCCCCCCCCeeEECCCCCEE-EEEeCCCEEEEECC-CCCEEEEE-EC--CCCCcEEEEEecCCCCE
Confidence 33 21 11222221 22446678999999766 66667788999998 55543322 11 13458999998 77653
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=1.4e-07 Score=89.48 Aligned_cols=201 Identities=12% Similarity=0.008 Sum_probs=126.7
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
.|.+.|..+. +.+.++.....+ . ++++|+|..++++.+ .++.|.+||..+.+.+..+.-.
T Consensus 60 ~V~ViD~~t~-------~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 60 QQFVIDGEAG-------RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp EEEEEETTTT-------EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred EEEEEECCCC-------eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence 6899999887 445555434444 4 999999954444432 3678999999999988877522
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCC-eEEEEEecCCCCceE
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTG-RIVTTGFSRHSDRQV 290 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~d~~i 290 (494)
......++|+|||++++.+.. ++.|.++|+.+++.+.++.... ....+ |.+. .+++.+ .||.+
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~-P~g~~~~~~~~----~DG~~ 201 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIF-PTAPDTFFMHC----RDGSL 201 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEE-EEETTEEEEEE----TTSCE
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceee-cCCCceeEEEC----CCCCE
Confidence 124667999999999988864 6899999999999988885421 12223 4334 344444 78999
Q ss_pred EEEeCCCCCCceeEe--eecCC-Cce-EEeEEe-CCCCEEEEEEeCCCcEEEEEeeCCCceEEeccccc-----------
Q psy14130 291 GLWDENDLNTPLALE--TVDSS-SGV-LFPYYD-HDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSL----------- 354 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~--~~~~~-~~v-~~~~~~-~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~----------- 354 (494)
.+.++.+........ .++.. ..+ ..+.|. ++|+++|++ .+|.|++.|+.++... ......
T Consensus 202 ~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs--~~g~V~v~d~~~~~~~--v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 202 AKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT--YTGKIHQIDLSSGDAK--FLPAVEALTEAERADGW 277 (386)
T ss_dssp EEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB--TTSEEEEEECTTSSCE--ECCCEESSCHHHHHTTE
T ss_pred EEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe--CCCEEEEEECCCCcce--eecceeccccccccccc
Confidence 999987522222111 11111 111 124665 677766543 4789999999776531 111110
Q ss_pred CCCCeeEEEEecCCceee
Q psy14130 355 SGAPQRGLGFMPKRGCDV 372 (494)
Q Consensus 355 ~~~~v~~~~~~p~~~~~~ 372 (494)
.......++++|++..+.
T Consensus 278 ~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp EECSSSCEEEETTTTEEE
T ss_pred cCCCcceeeECCCCCeEE
Confidence 122345678888766443
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.99 E-value=7.8e-07 Score=85.08 Aligned_cols=184 Identities=11% Similarity=-0.033 Sum_probs=116.3
Q ss_pred CcEEEEEcCCCCCCCCcccceEe-cccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec-----CCCCce
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMD-LHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID-----CHPDVI 222 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----~h~~~v 222 (494)
+.|.++| .+++ .+.. +.. .. ++.+.|.+...+++.+.||.+.++|. +++.+.... ....++
T Consensus 148 ~~v~viD-~t~~-------~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 148 PAVGLVV-QGGS-------SDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred CeEEEEE-CCCC-------EEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 4689999 8773 3333 221 11 35566776667888889999999999 877663322 112222
Q ss_pred -EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecC---------CCCceEEEEECCCCeEEEEEecC------
Q psy14130 223 -NCLSFNRDGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHP---------GTRSSKAVFIGDTGRIVTTGFSR------ 284 (494)
Q Consensus 223 -~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~g~~~------ 284 (494)
....+.+++..++..+.++.+.+.|+..+. .+..+.... ......+.+++++++++++.-..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccccc
Confidence 234567766665555578899999997653 223322111 01023367888877877765100
Q ss_pred CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 285 HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
...+.|.++|+.+.+.... +........++|+|||+ .+|++...++.|.+||+.+++.+..
T Consensus 295 ~~~~~V~VID~~t~~vv~~---i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQTSSQ---ISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCeEEEEECCCCEEEEE---EECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 0236899999987554332 33444688999999999 6645444699999999999887544
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.98 E-value=4.9e-07 Score=84.95 Aligned_cols=195 Identities=11% Similarity=0.000 Sum_probs=125.9
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEee
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGV 258 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 258 (494)
..+..|+|++..++++...++.|..||..+++.. .+. ....+.+++|+++|+++++. . ..|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee
Confidence 4578899986567888888899999999887643 333 35689999999999877764 3 459999998887533222
Q ss_pred e---cCCCCceEEEEECCCCeEEEEEecC---CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC
Q psy14130 259 C---HPGTRSSKAVFIGDTGRIVTTGFSR---HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 259 ~---~~~~~~~~~~~~~~~~~l~~~g~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
. .....+..+.+.+++ +++++.... ...+.|..+| +.. ...+ .........++|+|+++.|+++.+.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~--~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGK-VTKL--FADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp SSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTE-EEEE--EEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCc-EEEe--eCCCcccCCeEEcCCCCEEEEEECCC
Confidence 1 111236778888885 455544100 0124566666 322 1111 11223466889999999988888788
Q ss_pred CcEEEEEee--CC-Cce-EEecccc-cCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 333 GNIRYYELT--NE-RPY-IHFLNQS-LSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 333 g~i~~wd~~--~~-~~~-~~~~~~~-~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
+.|.+||+. ++ +.. ...+..+ .......++++.++|.+.++. ++.+..|+.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 999999986 55 311 0111111 112456889999999887775 456666665
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.95 E-value=2.9e-06 Score=77.07 Aligned_cols=225 Identities=11% Similarity=-0.047 Sum_probs=140.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.+.|+.+++....... + .....+......+.+++|++++..++++-..++.|..+|+..+.....+........++++
T Consensus 9 ~~~I~~~~~~g~~~~~-~-~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~ 86 (267)
T 1npe_A 9 TGKIERLPLERNTMKK-T-EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEEESSSCBCG-G-GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE
T ss_pred CCeEEEEEecCccccc-c-cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEE
Confidence 3468888877653210 0 0011122223457899999976566667667889999999765543334333357889999
Q ss_pred cCCCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC--CceEEEEeCCCCCCceeE
Q psy14130 228 NRDGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS--DRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 228 ~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--d~~i~iwd~~~~~~~~~~ 304 (494)
++++..|+.+ ...+.|.++|+..... ..+..........+++.++++.++++. .. .+.|..+++..... ..+
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~---~~~~~~~I~~~~~dg~~~-~~~ 161 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTD---WNRDNPKIETSHMDGTNR-RIL 161 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEE---CCSSSCEEEEEETTSCCC-EEE
T ss_pred EecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEE---CCCCCcEEEEEecCCCCc-EEE
Confidence 9976555544 4578999999874432 222222212378899999778888877 33 46888888764222 222
Q ss_pred eeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEE
Q psy14130 305 ETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFK 382 (494)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~ 382 (494)
.. ........++++++++.||++-...+.|.++|...... ...... .....+++.. .+.+.++. .+.+..++
T Consensus 162 ~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~---~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 162 AQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEG---LQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEEC---CCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEecC---CCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 11 22345778999999999989988889999999875432 222221 2334677765 45555554 34454454
Q ss_pred eeC
Q psy14130 383 LHT 385 (494)
Q Consensus 383 l~~ 385 (494)
..+
T Consensus 236 ~~~ 238 (267)
T 1npe_A 236 LAI 238 (267)
T ss_dssp TTT
T ss_pred CCC
Confidence 433
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.94 E-value=2e-07 Score=89.06 Aligned_cols=198 Identities=9% Similarity=0.027 Sum_probs=132.3
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCC----eEEEEec-------CCCCceEEEEEcCCCCEEEEEeCC------CeEEEEeC
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKG----EALTVID-------CHPDVINCLSFNRDGSRLVTTCKD------KTVRVLDP 248 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~d------~~v~iwd~ 248 (494)
++...+++++..++.|.++|+.+. +...+++ ........+...|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777667777888899999999755 6666663 112245678899999 77777666 78999999
Q ss_pred CCCceEEEeeecCCC--CceEEEEECCCCeEEEEEec----------C-----CCCceEEEEeCCCCCCceeEeeec-CC
Q psy14130 249 RTGLVISQGVCHPGT--RSSKAVFIGDTGRIVTTGFS----------R-----HSDRQVGLWDENDLNTPLALETVD-SS 310 (494)
Q Consensus 249 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~~----------~-----~~d~~i~iwd~~~~~~~~~~~~~~-~~ 310 (494)
.+.+.+.++...... ....+.|+|+++.++++.|. - ..+.+|.+||+.+.+ ........ ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCCCC
Confidence 999999888633222 13457889997766666320 0 126899999998742 22222221 11
Q ss_pred CceEEeE--EeCCCCEEEEEEe-----CCCcEEEEEeeCCCceEEe---cccc--c------------CCCCeeEEEEec
Q psy14130 311 SGVLFPY--YDHDTRILFLAGK-----GDGNIRYYELTNERPYIHF---LNQS--L------------SGAPQRGLGFMP 366 (494)
Q Consensus 311 ~~v~~~~--~~~~~~~l~~~g~-----~dg~i~~wd~~~~~~~~~~---~~~~--~------------~~~~v~~~~~~p 366 (494)
.....+. |+|+++++|+++- .+++|.+|....++..... +... . ......++.++|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 2344444 4999999999888 8889988887654311110 0110 0 024578999999
Q ss_pred CCceeeec---cceeEEEEeeC
Q psy14130 367 KRGCDVTQ---CEIFRFFKLHT 385 (494)
Q Consensus 367 ~~~~~~~~---~~~~~~~~l~~ 385 (494)
|+.++-.+ .+.+.+|++..
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCEEEEEEecC
Confidence 99876553 77899999864
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=6.9e-07 Score=80.14 Aligned_cols=194 Identities=9% Similarity=-0.044 Sum_probs=129.6
Q ss_pred EEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCC-CceEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCceE
Q psy14130 179 VGYIEWHPTAENVVASAGF--DYLIILWDVGKGEALTVIDCHP-DVINCLSFNRDGSRLVTT-CKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~ 254 (494)
...++|++++ .++++.+. ++.|.+.|+.+++.+..+.-.. .....+++. +..|+.+ -.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 5789999986 56666553 5799999999999888875221 122345554 4455544 46889999999999998
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++... .. ......+++++++++. .++.|.++|..+.+....+..-... ..+..+.|. ++ .+|+....
T Consensus 100 ~~i~~g-~~--~g~glt~Dg~~l~vs~----gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~ 170 (266)
T 2iwa_A 100 KNFTHQ-MK--DGWGLATDGKILYGSD----GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQ 170 (266)
T ss_dssp EEEECC-SS--SCCEEEECSSSEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred EEEECC-CC--CeEEEEECCCEEEEEC----CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCC
Confidence 888644 12 1233455767777654 5789999999886654443322211 235567777 66 67688777
Q ss_pred CCcEEEEEeeCCCceEEecc-cc---------cCCCCeeEEEEecCCc-eeeeccceeEEEEee
Q psy14130 332 DGNIRYYELTNERPYIHFLN-QS---------LSGAPQRGLGFMPKRG-CDVTQCEIFRFFKLH 384 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~-~~---------~~~~~v~~~~~~p~~~-~~~~~~~~~~~~~l~ 384 (494)
++.|.+.|..+++....+-. .. .......+++|+|++. +++++...-+++.+.
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 89999999999987554422 11 1123568999999875 566664444555443
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=5e-08 Score=92.48 Aligned_cols=205 Identities=9% Similarity=-0.012 Sum_probs=128.5
Q ss_pred ccEEEEEEcCCCCCEEEEEe--CCCeEEEEECCCCeEEEEec-------CCCCceEEEEEcCCCCEEEEEeC-----CCe
Q psy14130 177 RRVGYIEWHPTAENVVASAG--FDYLIILWDVGKGEALTVID-------CHPDVINCLSFNRDGSRLVTTCK-----DKT 242 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~-----d~~ 242 (494)
..+..++++|+| +++++.. .++.++||.+.+++. ..+. .|-..+.+++++++|+++++-.. +..
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 678999999998 6888864 234355665545543 3231 24567999999999987666544 579
Q ss_pred EEEEeCCCCceEEEeeecC-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----------
Q psy14130 243 VRVLDPRTGLVISQGVCHP-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET----------- 306 (494)
Q Consensus 243 v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~----------- 306 (494)
|.+||+.+++.+..+.... ......+++.++++.++++..+...++.|.+||+.+.........
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999999998777665431 122578899887678888871101678999999875432111100
Q ss_pred -ec---------------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC---CCc----eEEecccccCCCCeeEEE
Q psy14130 307 -VD---------------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN---ERP----YIHFLNQSLSGAPQRGLG 363 (494)
Q Consensus 307 -~~---------------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~---~~~----~~~~~~~~~~~~~v~~~~ 363 (494)
.+ ....+..++++|+++.||++......|..++... +.. +...+..........+++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 00 0123577999999999977655444555555321 110 000000001123567899
Q ss_pred EecCCceeeec--cceeEEEEe
Q psy14130 364 FMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 364 ~~p~~~~~~~~--~~~~~~~~l 383 (494)
+.++|.+.++. ++.+..|+.
T Consensus 255 ~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 255 IDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ECTTCCEEEEEGGGTEEEEEET
T ss_pred ECCCCCEEEEccCCCeEEEEEC
Confidence 99999888885 567777776
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.93 E-value=4.3e-08 Score=93.02 Aligned_cols=214 Identities=7% Similarity=-0.055 Sum_probs=131.6
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe---------CCCeEEEEECCCCeEEEEecCC--
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG---------FDYLIILWDVGKGEALTVIDCH-- 218 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h-- 218 (494)
+|.+.|..+. +.+.++.....+ .+.++|++..+.++.+ .++.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~-------~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCG-------VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTT-------EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCC-------eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 5788999888 555555544445 7999999954444432 4789999999999999888633
Q ss_pred -----CCceEEEEEcCCCCEEEEEeC--CCeEEE--EeCCCCceEEEeeecCCCC------ceEEEE-------------
Q psy14130 219 -----PDVINCLSFNRDGSRLVTTCK--DKTVRV--LDPRTGLVISQGVCHPGTR------SSKAVF------------- 270 (494)
Q Consensus 219 -----~~~v~~l~~~~~~~~l~s~~~--d~~v~i--wd~~~~~~~~~~~~~~~~~------~~~~~~------------- 270 (494)
......++++|||++++.+.. +..+.+ +|+.+ +.++....... ..-+..
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 134568999999999998874 467888 99876 23332100000 000011
Q ss_pred ------------------------ECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec--------C---CCceEE
Q psy14130 271 ------------------------IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD--------S---SSGVLF 315 (494)
Q Consensus 271 ------------------------~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~--------~---~~~v~~ 315 (494)
.++++.++.+. . +.|.+.|+...... ....+. . ..+...
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs----~-~~V~viD~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV----A-SSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB----S-SCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSSC
T ss_pred ccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc----C-CEEEEEECCCCcce-EEEEEEeccccccccccccCccee
Confidence 22223333333 2 55666665432110 011000 0 011122
Q ss_pred eEEeCCCCEEEEEEe---C-----CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc-eeee-c--cceeEEEEe
Q psy14130 316 PYYDHDTRILFLAGK---G-----DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG-CDVT-Q--CEIFRFFKL 383 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~---~-----dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~~~-~--~~~~~~~~l 383 (494)
++++||++.+|++.. . ++.+.++|+.+.+.+.++. .+....+++|+||+. ++++ . ++.+.++++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~----vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS----NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE----EEEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE----CCCCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 679999999987754 2 2356699999987643332 233589999999987 3443 3 688999998
Q ss_pred eC
Q psy14130 384 HT 385 (494)
Q Consensus 384 ~~ 385 (494)
.+
T Consensus 345 ~t 346 (368)
T 1mda_H 345 AS 346 (368)
T ss_dssp SS
T ss_pred CC
Confidence 87
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=7.6e-10 Score=106.16 Aligned_cols=192 Identities=11% Similarity=0.007 Sum_probs=99.4
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-ceE-EEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD-VIN-CLS 226 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-~v~-~l~ 226 (494)
+.|..||..+++ .+-.+.. ..+.+..+..++ .++++++.|+.|+.||..+|+.+..+..+.. .+. +..
T Consensus 19 g~v~a~d~~tG~-------~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~ 88 (369)
T 2hz6_A 19 GSLHAVSKRTGS-------IKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC 88 (369)
T ss_dssp SEEEEEETTTCC-------EEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC
T ss_pred CEEEEEECCCCC-------EEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce
Confidence 579999999884 3333333 344444455665 5788888999999999999987766653321 110 011
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 227 FNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 227 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
+. ++..+++++.|+.|+.||.++|+.+..+..+.. ..++|+++.+++.+ .++.|+.||.++++..-....
T Consensus 89 ~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~----~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 89 RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGR----TEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp C------CCCCEEEEEEEEECCC---------------------------EEEEE----EEEEEECCCSSSSSCCCEEEE
T ss_pred Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEe----cCCEEEEEECCCCCEEEeEec
Confidence 11 345778888999999999999998877765532 23345545555544 789999999988765443322
Q ss_pred ecCCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeE-EEEecCCc
Q psy14130 307 VDSSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRG-LGFMPKRG 369 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~ 369 (494)
.. ...+.++.+. ..+ ++++.||.|+.||..+++.+.... ...++.. .++++++.
T Consensus 159 ~~----~~~~~~~~~~~~~~~v-~~~~~dg~v~a~d~~tG~~~W~~~----~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD----YAASLPEDDVDYKMSH-FVSNGDGLVVTVDSESGDVLWIQN----YASPVVAFYVWQREGL 216 (369)
T ss_dssp EE----ECCBCCCCCTTCCCCE-EEEETSCEEEEECTTTCCEEEEEE----CSSCEEEEEECTTSSC
T ss_pred cc----ccCccccCCccccceE-EEECCCCEEEEEECCCCcEEEEec----CCCceEEEEEecCCce
Confidence 11 2233444432 445 457789999999999998654432 2344443 44556664
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=7.4e-08 Score=95.27 Aligned_cols=209 Identities=11% Similarity=0.060 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCCCCcccceE--ecccccccEEEEEE-c-CCCCCEEEEEe------------------CCCeEEEEECC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIM--DLHGHKRRVGYIEW-H-PTAENVVASAG------------------FDYLIILWDVG 207 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~--~~~~h~~~V~~~~~-~-p~~~~~l~s~s------------------~d~~v~iwd~~ 207 (494)
.|.+.|+.+. +... .+. .......+++ + |+++ +++.++ .++.+.+.|..
T Consensus 113 rVavIdl~t~-------~~~~ii~ip-~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~ 183 (595)
T 1fwx_A 113 RVARVRCDVM-------KCDAILEIP-NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD 183 (595)
T ss_dssp EEEEEETTTT-------EEEEEEECS-SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT
T ss_pred EEEEEECCCc-------eEeeEEeCC-CCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceEEEEECC
Confidence 4778888776 3333 332 2234678887 5 8884 565553 35689999999
Q ss_pred CCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCC--------------------------------------eEEEEeCC
Q psy14130 208 KGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDK--------------------------------------TVRVLDPR 249 (494)
Q Consensus 208 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~--------------------------------------~v~iwd~~ 249 (494)
+.+.+.++.--. ....++++|+|+++++++.+. .|.+.|.+
T Consensus 184 t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~ 262 (595)
T 1fwx_A 184 KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGR 262 (595)
T ss_dssp TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECS
T ss_pred CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCc
Confidence 998888876322 456788999999999988553 47788888
Q ss_pred C--Cce-EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC---------ceeEeeecCCCceEEeE
Q psy14130 250 T--GLV-ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT---------PLALETVDSSSGVLFPY 317 (494)
Q Consensus 250 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~---------~~~~~~~~~~~~v~~~~ 317 (494)
+ ++. +..+..... ...+.++|++.++++++ ..+.+|.++|+.+... ...........+...++
T Consensus 263 ~~~~~~~~~~Ipvg~~--PhGv~~sPDGk~v~V~~---~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 263 KEASSLFTRYIPIANN--PHGCNMAPDKKHLCVAG---KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp GGGCCSSEEEEEEESS--CCCEEECTTSSEEEEEC---TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred ccCCceeEEEEecCCC--ceEEEEcCCCCEEEEeC---CCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 7 554 555554433 57899999988899998 7899999999885321 01223344557889999
Q ss_pred EeCCCCEEEEEEeCCCcEEEEEeeC----------CCceEEecccccC--CCCeeEEEEecCCceeeec
Q psy14130 318 YDHDTRILFLAGKGDGNIRYYELTN----------ERPYIHFLNQSLS--GAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 318 ~~~~~~~l~~~g~~dg~i~~wd~~~----------~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~~~~ 374 (494)
|+|+| .+|++.-.|+.|.+||+.. .+.+.+.-.++.. ...-.+++++|||.++++.
T Consensus 338 F~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 338 FDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp ECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred ECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 99999 8889999999999999987 2222222111110 0111334568999988875
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.88 E-value=2.6e-07 Score=85.89 Aligned_cols=201 Identities=14% Similarity=0.076 Sum_probs=126.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---C-CCCceEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID---C-HPDVINC 224 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~-h~~~v~~ 224 (494)
+.|..|+. ++. ...+..+...+.+++++++| +++++...++.|.+||.. ++...... + ....+.+
T Consensus 67 ~~i~~~~~-~g~--------~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 67 RRVLGWRE-DGT--------VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TEEEEEET-TSC--------EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCC
T ss_pred CEEEEEeC-CCC--------EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCC
Confidence 35888876 331 23344456778999999998 677666666899999986 55322221 1 1134678
Q ss_pred EEEcCCCCEEEE----EeC-------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC-
Q psy14130 225 LSFNRDGSRLVT----TCK-------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS- 286 (494)
Q Consensus 225 l~~~~~~~~l~s----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~- 286 (494)
++++++|++++| |.. .+.|..||..+++..... .... ...++|+|++..++++. ..
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~---~~~ 209 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQ---TPE 209 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEE---CCC
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEe---cCC
Confidence 999999998886 332 356888888777744333 2222 67899999976677766 33
Q ss_pred ----CceEEEEeCCCCCCceeEeee-c-CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCee
Q psy14130 287 ----DRQVGLWDENDLNTPLALETV-D-SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQR 360 (494)
Q Consensus 287 ----d~~i~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~ 360 (494)
.+.|.+||+.... ....... . .......++++++|+.. ++. .+| |.+|+. .++.+..+. ....+.
T Consensus 210 ~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~-~~g-v~~~~~-~g~~~~~~~----~~~~~~ 280 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSS-GTG-VCVFDS-DGQLLGHIP----TPGTAS 280 (305)
T ss_dssp ---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECC-SSE-EEEECT-TSCEEEEEE----CSSCCC
T ss_pred cCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-Eec-CCc-EEEECC-CCCEEEEEE----CCCcee
Confidence 2789999986432 1111111 1 12334568899999954 544 444 999997 454433322 123588
Q ss_pred EEEEecCCce-eeecc
Q psy14130 361 GLGFMPKRGC-DVTQC 375 (494)
Q Consensus 361 ~~~~~p~~~~-~~~~~ 375 (494)
+++|.|++.. .++..
T Consensus 281 ~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEEECTTSCEEEEEET
T ss_pred EEEEeCCCCEEEEEcC
Confidence 9999998754 34443
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=1.1e-06 Score=78.77 Aligned_cols=180 Identities=12% Similarity=0.036 Sum_probs=125.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
+.|.+.|+.+++. +..+. +.......+++. +..+.++.-.++.+.++|..+.+.+.++...... ...+
T Consensus 44 s~v~~iD~~tg~v-------~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~gl 112 (266)
T 2iwa_A 44 SSVRQVALQTGKV-------ENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGL 112 (266)
T ss_dssp CEEEEEETTTCCE-------EEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEE
T ss_pred CEEEEEECCCCCE-------EEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEE
Confidence 4799999999843 33322 111122345555 3356666677899999999999999888632111 2335
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
++||+.++.+..+++|.++|+.+.+.+..+..... .....+.|. + +++++.. ..++.|.+.|..+++....
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d-g~lyvn~---~~~~~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N-GEVWANI---WQTDCIARISAKDGTLLGW 187 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTSSEEEEEETTTCCEEEE
T ss_pred EECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C-CEEEEec---CCCCeEEEEECCCCcEEEE
Confidence 55777777777889999999999998777763321 125677777 4 6888777 4678999999998665333
Q ss_pred Eeeec-----------CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 304 LETVD-----------SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 304 ~~~~~-----------~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
+.... .......++|+|+++.+|+++...+.+...++....
T Consensus 188 I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 188 ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 32110 012457899999999999999999999999987653
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=6.5e-07 Score=79.33 Aligned_cols=194 Identities=10% Similarity=-0.012 Sum_probs=131.5
Q ss_pred EEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC-KDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~ 255 (494)
...+.|+ ++ .++.+++.+| .|+++|+.+++.+..+... .........+++..|.... .++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 3788898 55 6888888776 8999999999988887643 3343333333455555555 58899999999999999
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCC
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~d 332 (494)
++..... -..++ ++++.++.+. .++.|.++|..+.+....+...... ..+..+.|. +| .|++..-.+
T Consensus 122 ti~~~~e--G~glt--~dg~~L~~Sd----Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~ 191 (262)
T 3nol_A 122 SFNYDGE--GWGLT--HNDQYLIMSD----GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQT 191 (262)
T ss_dssp EEECSSC--CCCEE--ECSSCEEECC----SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTS
T ss_pred EEECCCC--ceEEe--cCCCEEEEEC----CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccC
Confidence 9876433 23444 4556666654 4788999999886654443332222 233446676 56 566877788
Q ss_pred CcEEEEEeeCCCceEEeccc-c--------cCCCCeeEEEEecCC-ceeeeccceeEEEEeeC
Q psy14130 333 GNIRYYELTNERPYIHFLNQ-S--------LSGAPQRGLGFMPKR-GCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 333 g~i~~wd~~~~~~~~~~~~~-~--------~~~~~v~~~~~~p~~-~~~~~~~~~~~~~~l~~ 385 (494)
+.|.+.|.++++....+-.. . .......+|||+|++ .+++++-.--++|.+.-
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 89999999999875444221 1 112456999999964 56677776677776643
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.83 E-value=3.2e-06 Score=87.65 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=118.9
Q ss_pred EEEEcCCCCCEEEEEeCCCe-------------------EEEEECCCCeEEEEecC--CC-------CceEEEEEcCCCC
Q psy14130 181 YIEWHPTAENVVASAGFDYL-------------------IILWDVGKGEALTVIDC--HP-------DVINCLSFNRDGS 232 (494)
Q Consensus 181 ~~~~~p~~~~~l~s~s~d~~-------------------v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~ 232 (494)
.++++|+. .+++.++.++. |..+|..+|+.+..++. |. ..+.......+|+
T Consensus 239 ~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 57888887 58888887764 99999999999888764 22 1122222223565
Q ss_pred ---EEEEEeCCCeEEEEeCCCCceEEEeeecCC--------------------------------------CCceEEEEE
Q psy14130 233 ---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG--------------------------------------TRSSKAVFI 271 (494)
Q Consensus 233 ---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~ 271 (494)
.++.++.+|.++++|.++|+++........ .....+++.
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 788999999999999999998744321110 001236788
Q ss_pred CCCCeEEEEEec---------C--------------------------------CCCceEEEEeCCCCCCceeEeeecCC
Q psy14130 272 GDTGRIVTTGFS---------R--------------------------------HSDRQVGLWDENDLNTPLALETVDSS 310 (494)
Q Consensus 272 ~~~~~l~~~g~~---------~--------------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~ 310 (494)
|+.+.+++.... . ..++.|..||+.+++..-... ..
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~ 474 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP---YV 474 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE---ES
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc---CC
Confidence 886655544210 0 014789999998876433322 22
Q ss_pred CceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 311 SGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.......+...+..+ +.|+.||.|+.||.++++.+.++... ......-++|..+|...+.
T Consensus 475 ~~~~~g~~~tagglv-f~gt~dg~l~a~D~~tG~~lw~~~~~--~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 475 TIFNGGTLSTAGNLV-FEGSADGRVIAYAADTGEKLWEQPAA--SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SSCCCCEEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEEEEE
T ss_pred CCccCccceECCCEE-EEECCCCcEEEEECCCCccceeeeCC--CCcccCceEEEECCEEEEE
Confidence 223333455677777 66789999999999999987655322 1222234677788775544
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.82 E-value=1.5e-05 Score=72.29 Aligned_cols=212 Identities=6% Similarity=-0.093 Sum_probs=133.1
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.+.+... +.|..++...... .............+++++++..++++-...+.|.++++........+..
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~-------~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~ 119 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEP-------TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT 119 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCC-------EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCEEEEEecCCCCc-------EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC
Confidence 344444443 3588888765421 1122222246789999997646666767778999999865432222332
Q ss_pred CCCceEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK---DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.......++++|++..|+.+.. .+.|..+++.... ...+..........+++.++++.++++. ...+.|.++|
T Consensus 120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d---~~~~~I~~~~ 195 (267)
T 1npe_A 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVD---AGTHRAECLN 195 (267)
T ss_dssp SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEE---CCCCEEEEEe
Confidence 2356789999997666655553 3688888876433 2333211222378899999888898888 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCc
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRG 369 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 369 (494)
+..... ... .........++. ++..||++....+.|..+|..+++....+... ......++++.|++.
T Consensus 196 ~~g~~~-~~~--~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g--~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 196 PAQPGR-RKV--LEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH--KQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEE-EEE--EECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTEEEEEECCS--SCCCCCCEEEECSCC
T ss_pred cCCCce-EEE--ecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCCceEEEccc--cccccceeeecCccC
Confidence 875321 111 122233445554 46778788878899999999988764443211 112368899998865
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.81 E-value=7.3e-10 Score=106.25 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=81.5
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..+++++.|+.|+.||..+|+.+..+.. +.+.+..+..++..+++++.|+.|+.||..+|+.+..+..+....+....
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 5899999999999999999999988875 55666666677888888889999999999999876665443211010000
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
....++.+++ | +.++.|+.||.++++..-.... .. ...++|++..+ ++++.|+.|+.||.++++....
T Consensus 88 ~~~~~~~v~~-g---~~dg~v~a~D~~tG~~~w~~~~---~~---~~~~~p~~~~v-~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 88 CRSSDGILYM-G---KKQDIWYVIDLLTGEKQQTLSS---AF---ADSLSPSTSLL-YLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CC-----CCC-C---EEEEEEEEECCC----------------------------E-EEEEEEEEEECCCSSSSSCCCE
T ss_pred eEecCCEEEE-E---eCCCEEEEEECCCCcEEEEecC---CC---cccccccCCEE-EEEecCCEEEEEECCCCCEEEe
Confidence 1112344444 4 3789999999998765333221 11 13456677777 6677899999999999986544
No 234
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.79 E-value=2.3e-06 Score=75.10 Aligned_cols=195 Identities=11% Similarity=-0.012 Sum_probs=130.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCC--eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCceE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDY--LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVT-TCKDKTVRVLDPRTGLVI 254 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~ 254 (494)
-...+.|++ + .++.+.+.+| .|+.+|+.+++.+..+... ...........+..|.. .-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 356899987 3 6778877764 8999999999988887633 23333222223444444 446899999999999999
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++..... -..++ +++++++++- .++.|.++|..+.+....+...... ..++.+.|. +| .+|+....
T Consensus 99 ~ti~~~~~--Gwglt--~dg~~L~vSd----gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~ 168 (243)
T 3mbr_X 99 ARFRYPGE--GWALT--SDDSHLYMSD----GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWL 168 (243)
T ss_dssp EEEECSSC--CCEEE--ECSSCEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred EEEeCCCC--ceEEe--eCCCEEEEEC----CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECC
Confidence 99876433 34444 4556676665 5788999999887654444332222 234455555 45 46677767
Q ss_pred CCcEEEEEeeCCCceEEeccc-c---------cCCCCeeEEEEecC-CceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERPYIHFLNQ-S---------LSGAPQRGLGFMPK-RGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~-~---------~~~~~v~~~~~~p~-~~~~~~~~~~~~~~~l~~ 385 (494)
+..|.+.|.++++.+..+-.. . ....-..+||+.|+ ..+++++-.--++|.+.-
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 889999999999875443211 1 12345699999996 456777766667776653
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=1.3e-06 Score=77.32 Aligned_cols=191 Identities=8% Similarity=-0.040 Sum_probs=130.1
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEE--EEEcCCCCEEEEEeCCCeEEEEeCCCCceEEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINC--LSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQ 256 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~--l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 256 (494)
...+.|+. + .++++.+.+|.|+++|+.+++.+..+ - ...... +++.. +++.+..-.++.+.+||..+.+.+.+
T Consensus 57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 46788874 3 78899999999999999999887776 2 233333 55543 34444455789999999999999999
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCC---CceEEeEEeCCCCEEEEEEeCCC
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSS---SGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
+..... -..++ +++++++.+. .++.|.++|..+.+....+...... ..++.+.|. +| .|++....+.
T Consensus 132 i~~~~e--GwGLt--~Dg~~L~vSd----Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~ 201 (268)
T 3nok_A 132 TRYSGE--GWGLC--YWNGKLVRSD----GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSS 201 (268)
T ss_dssp EECSSC--CCCEE--EETTEEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCS
T ss_pred EeCCCc--eeEEe--cCCCEEEEEC----CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCC
Confidence 876433 34555 4456666655 5889999999887654444332222 234556676 66 5667777788
Q ss_pred cEEEEEeeCCCceEEeccc-c---------cCCCCeeEEEEecC-CceeeeccceeEEEEee
Q psy14130 334 NIRYYELTNERPYIHFLNQ-S---------LSGAPQRGLGFMPK-RGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~~~~-~---------~~~~~v~~~~~~p~-~~~~~~~~~~~~~~~l~ 384 (494)
.|.+.|.++++.+..+-.. . ....-..+||+.|+ ..+++++-.--++|.+.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 9999999999865443221 1 12346799999996 45777776666666654
No 236
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.74 E-value=3e-05 Score=72.26 Aligned_cols=222 Identities=14% Similarity=-0.007 Sum_probs=138.5
Q ss_pred EcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCce
Q psy14130 147 PIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVI 222 (494)
Q Consensus 147 ~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v 222 (494)
..+.|+..++..... ...+. .-....+++|++.+..++++-...+.|..+++.. ......+...-...
T Consensus 8 ~~~~I~~i~~~~~~~-------~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEY-------TSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp CBSSEEEEETTSCCC-------EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred CCCeEEEEECCCcce-------Eehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 334688889887632 22222 3455789999987645666767778999999875 22222233233456
Q ss_pred EEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCC
Q psy14130 223 NCLSFNRDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNT 300 (494)
Q Consensus 223 ~~l~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~ 300 (494)
.++++++.+..| ++-...+.|.++|+..... ..+..........++..|.++.++.+. ... +.|...++... .
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d---~~~~~~I~~~~~dG~-~ 154 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGV-D 154 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSC-C
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEc---cCCCCeEEEEcCCCC-C
Confidence 889999755544 5556788999999875433 333222223378899999888888887 333 78888887642 2
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
...+. .........+++++++..||++-...+.|..+|+..... ..+...........++++.. +.+.++.-+.-+|
T Consensus 155 ~~~~~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V 231 (316)
T 1ijq_A 155 IYSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI 231 (316)
T ss_dssp EEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred eEEEE-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEEC-CEEEEEECCCCeE
Confidence 21111 123356778999999999989888888999999875432 23322111123457888864 5666665444444
Q ss_pred EEee
Q psy14130 381 FKLH 384 (494)
Q Consensus 381 ~~l~ 384 (494)
+.++
T Consensus 232 ~~~~ 235 (316)
T 1ijq_A 232 FSAN 235 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
No 237
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.70 E-value=3.1e-05 Score=68.93 Aligned_cols=209 Identities=9% Similarity=0.111 Sum_probs=137.2
Q ss_pred ecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy14130 171 DLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPR 249 (494)
Q Consensus 171 ~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~ 249 (494)
.+.+-...+..++|+|++..+++....++.|...|+. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4555667799999999875566667788999999997 877777642 22567889999999877776678899999876
Q ss_pred CCce---EEEeee-----cCCCCceEEEEECCCCeEEEEEecCCCCc-eEEEEeCCCCCCceeEeee------cCCCceE
Q psy14130 250 TGLV---ISQGVC-----HPGTRSSKAVFIGDTGRIVTTGFSRHSDR-QVGLWDENDLNTPLALETV------DSSSGVL 314 (494)
Q Consensus 250 ~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~------~~~~~v~ 314 (494)
.... +..... ........++|.+.+++++++. ..+. .|..|+-............ .....+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~---E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK---EKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE---ESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE---CcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 5442 222221 1122257899999988888877 2333 4555551000111111100 1224567
Q ss_pred EeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe-ccc-c----cCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 315 FPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF-LNQ-S----LSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 315 ~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~-~~~-~----~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.++++|....+++.......+..+|... +....+ +.. . ..-....+|+|.|+|.+.+++.. -.+|++..
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEe
Confidence 8999999999988888888899999664 432222 221 1 01136799999999998877543 37777765
No 238
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.70 E-value=3.2e-05 Score=73.14 Aligned_cols=224 Identities=9% Similarity=-0.040 Sum_probs=142.3
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI 222 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v 222 (494)
+++...+.|+..++... .....+. ....+..++|++....++++-...+.|..+++..+.....+.......
T Consensus 47 ll~~~~~~I~~i~~~g~-------~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p 118 (349)
T 3v64_C 47 LLFANRIDIRQVLPHRS-------EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP 118 (349)
T ss_dssp EEEECBSCEEEECTTSC-------CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred eEeecccceEEEeCCCC-------eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc
Confidence 33333446777776544 2212222 334578999998764566666677899999997665444343333456
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCC
Q psy14130 223 NCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNT 300 (494)
Q Consensus 223 ~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~ 300 (494)
.++++++.+. ++++-...+.|.+.++..... ..+..........+++.|.++.++.+. ... +.|..+++.....
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td---~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSC
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEec---cCCCCEEEEEeCCCCCc
Confidence 7899998554 445555678999999875443 223222223378899999888898887 455 8899998875322
Q ss_pred ceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEE
Q psy14130 301 PLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRF 380 (494)
Q Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 380 (494)
..+. .........++++|++..||++-...+.|..+|+..... ..++... .....++++ ..+.+.++.-+.-+|
T Consensus 195 -~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V 268 (349)
T 3v64_C 195 -RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPFAITV-FEDSLYWTDWHTKSI 268 (349)
T ss_dssp -EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS--CSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred -EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCC--CCCceEEEE-ECCEEEEecCCCCeE
Confidence 1111 122345778999999999989988889999999875433 2332211 234678888 455666665444555
Q ss_pred EEee
Q psy14130 381 FKLH 384 (494)
Q Consensus 381 ~~l~ 384 (494)
+.++
T Consensus 269 ~~~~ 272 (349)
T 3v64_C 269 NSAN 272 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.68 E-value=7e-07 Score=88.36 Aligned_cols=196 Identities=8% Similarity=-0.036 Sum_probs=138.0
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-CCCceEEEEE-c-CCCCEEEEEe------------------CCCeEE
Q psy14130 186 PTAENVVASAGFDYLIILWDVGKGEALTVIDC-HPDVINCLSF-N-RDGSRLVTTC------------------KDKTVR 244 (494)
Q Consensus 186 p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~l~s~~------------------~d~~v~ 244 (494)
++|..++++...+..|.+.|+.+.++...+.- ....+..+++ + |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 46645556666677899999999998775542 2356888898 5 8999998885 246899
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC----------------------------------CceE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS----------------------------------DRQV 290 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----------------------------------d~~i 290 (494)
+.|..+.+.+.++.-... ...+..++++++++++.++... -+.|
T Consensus 179 vID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999998888775332 5677889998888888743211 0247
Q ss_pred EEEeCCC--CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce--------EEecccccCCCCee
Q psy14130 291 GLWDEND--LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY--------IHFLNQSLSGAPQR 360 (494)
Q Consensus 291 ~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~~v~ 360 (494)
.+.|.++ ..... ..+.......++.++|||+++++++..+..|.++|+.+.+.. .........+...+
T Consensus 257 ~VID~~~~~~~~~~--~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFT--RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSE--EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EEEeCcccCCceeE--EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 7777765 22211 122223456678999999999999999999999999965310 01122334456789
Q ss_pred EEEEecCCceeeec--cceeEEEEeeC
Q psy14130 361 GLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 361 ~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
.++|+|+|...++. ++.+-.|++..
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 99999999554553 88899999876
No 240
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.67 E-value=2.4e-05 Score=75.11 Aligned_cols=226 Identities=9% Similarity=-0.051 Sum_probs=143.7
Q ss_pred cEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Q psy14130 141 GAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPD 220 (494)
Q Consensus 141 g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~ 220 (494)
+.+++...+.|+..++.... ....+. ....+..++|++.+..++++-...+.|..+++..+.....+.....
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~-------~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSE-------YTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp CEEEEECBSCEEEECTTSCC-------CEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred ceeEeecCccceeeccCCCc-------EEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 34444444568888776542 212222 3345789999987645666666778999999976654444443334
Q ss_pred ceEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCC
Q psy14130 221 VINCLSFNRDGSR-LVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDL 298 (494)
Q Consensus 221 ~v~~l~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~ 298 (494)
....+++++.+.. +++-...+.|.+.++........+. ........++..|.++.++.+. ... +.|..+++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td---~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTD---WGNTPRIEASSMDGS 235 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEE---CSSSCEEEEEETTSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEec---cCCCCEEEEEeCCCC
Confidence 5678999985554 4555567889999987544322222 2223378899999888888887 445 78999998753
Q ss_pred CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeecccee
Q psy14130 299 NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIF 378 (494)
Q Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 378 (494)
.. ..+. .........++++|++..||++-+..+.|..+|+..... ..++... .....++++ ..+.+.++.-+.-
T Consensus 236 ~~-~~~~-~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~--~~~P~giav-~~~~ly~td~~~~ 309 (386)
T 3v65_B 236 GR-RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPFAITV-FEDSLYWTDWHTK 309 (386)
T ss_dssp SC-EEEE-CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS--CSSEEEEEE-ETTEEEEEETTTT
T ss_pred Cc-EEEE-ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC--CCCceEEEE-ECCEEEEeeCCCC
Confidence 32 2221 123345778999999999989988889999999875433 2332211 234678888 4455666654444
Q ss_pred EEEEee
Q psy14130 379 RFFKLH 384 (494)
Q Consensus 379 ~~~~l~ 384 (494)
+|+.++
T Consensus 310 ~V~~~~ 315 (386)
T 3v65_B 310 SINSAN 315 (386)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 555554
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.67 E-value=4.5e-06 Score=73.91 Aligned_cols=164 Identities=13% Similarity=0.142 Sum_probs=109.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccE--EEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRV--GYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V--~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.|+.+|+.+++. +..+.-. ... -.++.. ++.+.+..-.++.+.++|..+.+.+.++..... =..++
T Consensus 66 ~v~~vD~~Tgkv-------~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~glt- 133 (262)
T 3nol_A 66 SIRKVDIESGKT-------LQQIELG-KRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGLT- 133 (262)
T ss_dssp EEEEECTTTCCE-------EEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCCEE-
T ss_pred eEEEEECCCCcE-------EEEEecC-CccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-ceEEe-
Confidence 699999999944 3333221 122 234443 435666666789999999999999998874222 13344
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCcee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLA 303 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~ 303 (494)
+|+..|+.+..+++|.++|+.+.+.+..+..... ..++.+.|. + +++++.. -.+..|.+.|.++++....
T Consensus 134 -~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~-G~lyan~---w~~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 134 -HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D-GEIFANV---WQTNKIVRIDPETGKVTGI 207 (262)
T ss_dssp -ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTSSEEEEECTTTCBEEEE
T ss_pred -cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C-CEEEEEE---ccCCeEEEEECCCCcEEEE
Confidence 4677777777788999999999998887754321 113456776 4 6888877 4678999999988664333
Q ss_pred Eeee----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 304 LETV----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 304 ~~~~----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+... ......+.++|+|+++.||++|..
T Consensus 208 Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 208 IDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 3211 111345779999999999999853
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.59 E-value=2.5e-06 Score=82.26 Aligned_cols=190 Identities=17% Similarity=0.087 Sum_probs=121.4
Q ss_pred CCCCCEEEEEeCC----CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCC
Q psy14130 186 PTAENVVASAGFD----YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----------KDKTVRVLDPRTG 251 (494)
Q Consensus 186 p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----------~d~~v~iwd~~~~ 251 (494)
+++..++++...+ +.|.++|+.+++.+.++..-..+ .++++|||++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4443344444444 79999999999999988755555 899999999888776 4678999999999
Q ss_pred ceEEEeeec-C-----CCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEE
Q psy14130 252 LVISQGVCH-P-----GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRIL 325 (494)
Q Consensus 252 ~~~~~~~~~-~-----~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 325 (494)
+.+.++... . +.....+.++|++.+++++.+ ..++.|.+.|+.+.+.... +..... ....|+++..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~--~~~~~VsVID~~t~kvv~~---I~v~g~---~~~~p~g~~~ 231 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF--SPAPAVGVVDLEGKTFDRM---LDVPDC---YHIFPASPTV 231 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC--SSSCEEEEEETTTTEEEEE---EECCSE---EEEEEEETTE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec--CCCCeEEEEECCCCeEEEE---EEcCCc---eeeccCCCcE
Confidence 988887643 0 122567899999888888762 1268899999987654222 222211 2345555555
Q ss_pred EEEEeCCCcEEEEEeeCCCceEEecccccC-CCC-eeEEEEecCCce--eeeccceeEEEEeeC
Q psy14130 326 FLAGKGDGNIRYYELTNERPYIHFLNQSLS-GAP-QRGLGFMPKRGC--DVTQCEIFRFFKLHT 385 (494)
Q Consensus 326 ~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~-v~~~~~~p~~~~--~~~~~~~~~~~~l~~ 385 (494)
|++.+.||.+.+.+..+++........+.. ..+ ...+.|.|++.. +++..+.+.+.++..
T Consensus 232 ~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 232 FYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp EEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred EEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence 577778888888888555543211001110 111 123567777553 233355666666644
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.59 E-value=0.00012 Score=70.64 Aligned_cols=227 Identities=13% Similarity=0.007 Sum_probs=140.4
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecCC
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDCH 218 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h 218 (494)
+++...+.|+..++.... ... +......+..++|++....++++-...+.|..+++... .....+...
T Consensus 86 ll~~~~~~I~~i~l~~~~-------~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSE-------YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEETTEEEEECTTSCS-------CEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eEEeccceeEEEccCCcc-------eeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 333444568888876552 212 22345668899999876456666666789999998652 223334434
Q ss_pred CCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 219 PDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 219 ~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
......+++++. ++++++-...+.|.+.|+........+. ........++..|.++.|+.+-+ ...+.|...++..
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~--~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEEC--SSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeC--CCCCEEEEEeCCC
Confidence 556789999984 4455555567899999988554333333 23233788999998788888872 2247899888875
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccce
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEI 377 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 377 (494)
... ..+. .........+++++++..||++-...+.|..+|+..... ..+...........++++.. +.++++.-+.
T Consensus 235 ~~~-~~~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 235 VDI-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp CSC-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred Ccc-EEEE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 332 2221 123356788999999999989888888999999876543 33332211123356777743 3555554333
Q ss_pred eEEEEee
Q psy14130 378 FRFFKLH 384 (494)
Q Consensus 378 ~~~~~l~ 384 (494)
-+|+.++
T Consensus 311 ~~V~~~~ 317 (400)
T 3p5b_L 311 EAIFSAN 317 (400)
T ss_dssp CSEEEEE
T ss_pred CeEEEEE
Confidence 3444443
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.59 E-value=2.5e-05 Score=68.57 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=110.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccc-cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKR-RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
.|+.+|+.+++. +....-... ---.+++. +..+.+..-.++.+.++|..+.+.+.++..... =..++
T Consensus 44 ~v~~vD~~tgkv-------~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt-- 111 (243)
T 3mbr_X 44 SVRKVDLETGRI-------LQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT-- 111 (243)
T ss_dssp EEEEEETTTCCE-------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--
T ss_pred eEEEEECCCCCE-------EEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--
Confidence 699999999844 333221111 11234443 335666667789999999999999999874322 24555
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL 304 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~ 304 (494)
+++..|+.+..+++|.++|+.+.+.+.++..... ...+.+.|. ++++++.. -.+..|.+.|.++++....+
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv---w~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANV---WLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE---TTTTEEEEECTTTCBEEEEE
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEE---CCCCeEEEEECCCCCEEEEE
Confidence 4566677667789999999999998877754321 124556665 46788777 35778999999886643332
Q ss_pred eee-----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 305 ETV-----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 305 ~~~-----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
... ....-.+.++|+|+++.||+||..
T Consensus 187 dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 187 DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 211 111345779999999999999854
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.58 E-value=1.5e-05 Score=70.68 Aligned_cols=165 Identities=9% Similarity=-0.043 Sum_probs=112.2
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|+++|+.+++....+ +.. ...--.+++. +..+.+..-.++.+.++|..+.+.+.++.... .-..++ +
T Consensus 76 ~v~~iD~~Tgkv~~~~------l~~-~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~ 143 (268)
T 3nok_A 76 TLRQLSLESAQPVWME------RLG-NIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EGWGLC--Y 143 (268)
T ss_dssp EEEECCSSCSSCSEEE------ECT-TCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CCCCEE--E
T ss_pred EEEEEECCCCcEEeEE------CCC-CcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ceeEEe--c
Confidence 5999999998543211 221 1111235554 33677777788999999999999999887432 223444 4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
|+..|+.+..+++|.++|+.+.+.+.++...... ..+.+.|. + +++++.. -.+..|.+.|.++++....+.
T Consensus 144 Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d-G~lyanv---w~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 144 WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N-GVIYANI---WHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T-TEEEEEE---TTCSEEEEECTTTCBEEEEEE
T ss_pred CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C-CEEEEEE---CCCCeEEEEeCCCCcEEEEEE
Confidence 6788888778999999999999988877543221 14556676 4 6788777 467899999998866433322
Q ss_pred ee-----------cCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 306 TV-----------DSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 306 ~~-----------~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.. +...-.+.++|+|+++.||+||..
T Consensus 219 l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 219 ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 11 111345779999999999999853
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.56 E-value=8.7e-06 Score=84.23 Aligned_cols=187 Identities=14% Similarity=0.093 Sum_probs=121.5
Q ss_pred EEEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeEEEEecC--CC-------CceEEEEEcCCC
Q psy14130 180 GYIEWHPTAENVVASAGFDY-------------------LIILWDVGKGEALTVIDC--HP-------DVINCLSFNRDG 231 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~ 231 (494)
..++++|++ .+++.++.++ .|..+|..+|+.+..++. |. ....-+....+|
T Consensus 246 ~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 467888887 5777777664 599999999998887763 21 122223333467
Q ss_pred ---CEEEEEeCCCeEEEEeCCCCceEEEeeecCCC----------------------------------CceEEEEECCC
Q psy14130 232 ---SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT----------------------------------RSSKAVFIGDT 274 (494)
Q Consensus 232 ---~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~ 274 (494)
..++.++.+|.+.++|.++|+.+......... ....++++|+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 68999999999999999999987665422100 01246778886
Q ss_pred CeEEEEEec------------C---------------------------CCCceEEEEeCCCCCCceeEeeecCCCceEE
Q psy14130 275 GRIVTTGFS------------R---------------------------HSDRQVGLWDENDLNTPLALETVDSSSGVLF 315 (494)
Q Consensus 275 ~~l~~~g~~------------~---------------------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 315 (494)
+.+++.... . ...+.|..||+.+++..-... ....+..
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~ 481 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE---HVSPWNG 481 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE---ESSSCCC
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC---CCCCCcC
Confidence 666554310 0 012789999998865433322 2233444
Q ss_pred eEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 316 PYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 316 ~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
..+..++..+ +.++.||.+++||.++++.+..+... ......-+.+.++|...+.
T Consensus 482 g~~~~~g~~v-~~g~~dg~l~a~D~~tG~~lw~~~~~--~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 482 GTLTTAGNVV-FQGTADGRLVAYHAATGEKLWEAPTG--TGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEETTTEE-EEECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEEEEE
T ss_pred cceEeCCCEE-EEECCCCcEEEEECCCCceeeeeeCC--CCcccCCEEEEeCCEEEEE
Confidence 4566677777 55789999999999999987665332 1222344566777765443
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.53 E-value=6.2e-06 Score=85.52 Aligned_cols=184 Identities=9% Similarity=0.038 Sum_probs=116.4
Q ss_pred CCCeEEEEECCCCeEEEEecCCC-------------------------------CceEEEEEcCCCCEEEEEeCCCe---
Q psy14130 197 FDYLIILWDVGKGEALTVIDCHP-------------------------------DVINCLSFNRDGSRLVTTCKDKT--- 242 (494)
Q Consensus 197 ~d~~v~iwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~l~s~~~d~~--- 242 (494)
.++.|+.||..+|+.+..+.... .....++++|++.+++.++.++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 37899999999999887765210 01125788998889999888764
Q ss_pred ----------------EEEEeCCCCceEEEeee--cCC------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCC
Q psy14130 243 ----------------VRVLDPRTGLVISQGVC--HPG------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 243 ----------------v~iwd~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~ 296 (494)
|..+|.++|+.+-.+.. |.. ..........++. .+++.+ +.+|.++++|.+
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~---~~~G~l~~lD~~ 337 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQA---PKNGFFYVIDRA 337 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC---CTTSEEEEEETT
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEE---CCCCeEEEEECC
Confidence 99999999998877654 221 0011111111321 266667 789999999998
Q ss_pred CCCCceeEeeec-------------------------------------CCCceEEeEEeCCCCEEEEEEeC--------
Q psy14130 297 DLNTPLALETVD-------------------------------------SSSGVLFPYYDHDTRILFLAGKG-------- 331 (494)
Q Consensus 297 ~~~~~~~~~~~~-------------------------------------~~~~v~~~~~~~~~~~l~~~g~~-------- 331 (494)
+++......... .......++|+|+...+|+....
T Consensus 338 tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~ 417 (689)
T 1yiq_A 338 TGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHI 417 (689)
T ss_dssp TCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECC
T ss_pred CCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeec
Confidence 866431111000 00011237899999988664221
Q ss_pred ------------------------------------CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--
Q psy14130 332 ------------------------------------DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT-- 373 (494)
Q Consensus 332 ------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~-- 373 (494)
+|.|+.||+.+++...+.-. ..+..+-.+...+.++..
T Consensus 418 ~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 418 PEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----VTIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp SSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEEC
T ss_pred cccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC----CCCccCccceECCCEEEEEC
Confidence 47899999999986544322 233444455555554443
Q ss_pred ccceeEEEEeeCCC
Q psy14130 374 QCEIFRFFKLHTTR 387 (494)
Q Consensus 374 ~~~~~~~~~l~~~~ 387 (494)
.|+.++.|+..+++
T Consensus 494 ~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 494 ADGRVIAYAADTGE 507 (689)
T ss_dssp TTSEEEEEETTTCC
T ss_pred CCCcEEEEECCCCc
Confidence 48899999988744
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.50 E-value=5.8e-05 Score=70.45 Aligned_cols=197 Identities=13% Similarity=0.005 Sum_probs=123.9
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--------------------CCCceEEEEEcC-CCCEEEE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--------------------HPDVINCLSFNR-DGSRLVT 236 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------------------h~~~v~~l~~~~-~~~~l~s 236 (494)
...+++|++++ ++++++..++.|..||..+++.. .+.. ....+.++++.+ +|+ |+.
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 34578899987 67788888999999998765432 2210 013578999998 554 555
Q ss_pred EeCCCeEEEEeCCCCceEEEeee----cCCCCceEEEEEC-CCCeEEEEEecC--------------CCCceEEEEeCCC
Q psy14130 237 TCKDKTVRVLDPRTGLVISQGVC----HPGTRSSKAVFIG-DTGRIVTTGFSR--------------HSDRQVGLWDEND 297 (494)
Q Consensus 237 ~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~g~~~--------------~~d~~i~iwd~~~ 297 (494)
+...+.|..+|..+++. ..+.. ........+++.+ + +.++++.... ..++.|..||..+
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 55556689999876542 22211 1112256788888 6 5666654110 1236788888765
Q ss_pred CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-eEEecccccCCCCeeEEEEecCCceeeeccc
Q psy14130 298 LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP-YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCE 376 (494)
Q Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 376 (494)
......... ......++++|+++.||++-...+.|..|++..... ........ .. ..++++.++|.+.++..+
T Consensus 175 ~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 175 KETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEEEEEEE
T ss_pred CEEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEEEEecC
Confidence 432111111 133456899999998888877888999999875321 01111121 23 788999999987777644
Q ss_pred ----------eeEEEEeeC
Q psy14130 377 ----------IFRFFKLHT 385 (494)
Q Consensus 377 ----------~~~~~~l~~ 385 (494)
..+++.+..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT
T ss_pred cccccccCCCccEEEEECC
Confidence 466777766
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.47 E-value=0.00029 Score=67.22 Aligned_cols=179 Identities=7% Similarity=-0.044 Sum_probs=107.6
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCce-----EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCC-
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVI-----NCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGT- 263 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~- 263 (494)
..++.++.++.|..+|..+|+.+.......... ...... +..++.++.++.|..+|..+|+.+.........
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 377788889999999999999887776432211 122222 456788888999999999999987666533210
Q ss_pred ---------CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCc
Q psy14130 264 ---------RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGN 334 (494)
Q Consensus 264 ---------~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~ 334 (494)
........ ++.+++.+ .++.+..+|.++++..-.. . ......+.. ++..+ ..++.++.
T Consensus 222 ~~~~~~~~~~~~~p~~~--~~~v~~~~----~~g~l~~~d~~tG~~~w~~---~-~~~~~~~~~--~~~~l-~~~~~~g~ 288 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVV--NGVVFALA----YNGNLTALDLRSGQIMWKR---E-LGSVNDFIV--DGNRI-YLVDQNDR 288 (376)
T ss_dssp --------CCCCCCEEE--TTEEEEEC----TTSCEEEEETTTCCEEEEE---C-CCCEEEEEE--ETTEE-EEEETTCC
T ss_pred CcccccccccCCCcEEE--CCEEEEEe----cCcEEEEEECCCCcEEeec---c-CCCCCCceE--ECCEE-EEEcCCCe
Confidence 00111111 35555554 6889999999876543221 1 123334444 35566 44567899
Q ss_pred EEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 335 IRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 335 i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|..+|..+++....... . ............+..++.+.++.+..++..+
T Consensus 289 l~~~d~~tG~~~w~~~~-~-~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 289 VMALTIDGGVTLWTQSD-L-LHRLLTSPVLYNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp EEEEETTTCCEEEEECT-T-TTSCCCCCEEETTEEEEECTTSEEEEEETTT
T ss_pred EEEEECCCCcEEEeecc-c-CCCcccCCEEECCEEEEEeCCCeEEEEECCC
Confidence 99999999986544321 1 1122233333333223333467788888766
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.43 E-value=4.9e-05 Score=70.41 Aligned_cols=197 Identities=9% Similarity=-0.008 Sum_probs=120.5
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--KTVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~ 254 (494)
.....++|++++ +++++-..++.|..||.... ....+. ....+.+++++++|+++++.... ..|..+|..+++..
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 446789999988 67777778899999998654 333333 34578999999999976665443 25777888888754
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeE-e------e-ecCCCceEEeEEeCCCCEEE
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLAL-E------T-VDSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~-~------~-~~~~~~v~~~~~~~~~~~l~ 326 (494)
.............++.. .++.++++. ..++.|.++|.......... . . .........+ +|+++.||
T Consensus 109 ~~~~~~~~~~~~g~~~~-~~~~~~v~d---~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPL-SDTQYLTAD---SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEECTTCSCEEEEEES-SSSEEEEEE---TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEeCCCccccCccccc-CCCcEEEEE---CCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 32222112212334433 346667766 46888999997642110100 0 0 0111223344 88999998
Q ss_pred EEEeCCCcEEEEEeeC-CCce-EEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 327 LAGKGDGNIRYYELTN-ERPY-IHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~-~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
++-...+.|..|++.. ++.- ...... .....++++.++|.+.++.-+.-+|..+..
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 9988899999999975 3210 111111 134688999999988877633333443443
No 251
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=9.1e-06 Score=84.10 Aligned_cols=183 Identities=13% Similarity=0.075 Sum_probs=119.0
Q ss_pred CCeEEEEECCCCeEEEEecCCCCc--------------------------------eEEEEEcCCCCEEEEEeCCC----
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDV--------------------------------INCLSFNRDGSRLVTTCKDK---- 241 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~--------------------------------v~~l~~~~~~~~l~s~~~d~---- 241 (494)
++.|+.+|..+|+.+..+...... ...+++++++.+++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 799999999999998877532211 13578899888998887664
Q ss_pred ---------------eEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCC
Q psy14130 242 ---------------TVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 242 ---------------~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.|..+|.++|+.+..+..... .....+....++. .+++.+ +.+|.|+++|.+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~---~~~G~l~~lD~~ 345 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHA---PKNGFFFVLDRT 345 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEEC---CTTSEEEEEETT
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEE---CCCCEEEEEECC
Confidence 599999999998877654211 1112222222432 567777 789999999998
Q ss_pred CCCCceeEeeec--------CC-------------------------CceEEeEEeCCCCEEEEEEe-------------
Q psy14130 297 DLNTPLALETVD--------SS-------------------------SGVLFPYYDHDTRILFLAGK------------- 330 (494)
Q Consensus 297 ~~~~~~~~~~~~--------~~-------------------------~~v~~~~~~~~~~~l~~~g~------------- 330 (494)
+++......... .. .....++|+|++..+|+...
T Consensus 346 tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (677)
T 1kb0_A 346 NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWE 425 (677)
T ss_dssp TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCC
T ss_pred CCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccc
Confidence 876432221100 00 00125789999999866432
Q ss_pred -----------------------------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeE
Q psy14130 331 -----------------------------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFR 379 (494)
Q Consensus 331 -----------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~ 379 (494)
..|.|..||+.+++...+.. ...++.+..+..++.+++. .++.++
T Consensus 426 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~----~~~~~~~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 426 FNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp TTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEE
T ss_pred cccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC----CCCCCcCcceEeCCCEEEEECCCCcEE
Confidence 12789999999998654432 2344556666666554443 488899
Q ss_pred EEEeeCCC
Q psy14130 380 FFKLHTTR 387 (494)
Q Consensus 380 ~~~l~~~~ 387 (494)
+|++.+++
T Consensus 502 a~D~~tG~ 509 (677)
T 1kb0_A 502 AYHAATGE 509 (677)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 99987743
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.43 E-value=1.8e-05 Score=74.02 Aligned_cols=207 Identities=11% Similarity=-0.006 Sum_probs=127.8
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|..+|.. + +.......+...+.++...+++ . +..++.++.|..+|.. ++.+..+......+.++...
T Consensus 117 ~~l~~~d~~-g-------~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 117 GHLYAINTD-G-------TEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp SEEEEECTT-S-------CEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred CEEEEEcCC-C-------CEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEc
Confidence 457777765 4 2222222334445666777776 3 6667788999999998 87777776566677888888
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec
Q psy14130 229 RDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD 308 (494)
Q Consensus 229 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 308 (494)
+++.+++.+ +.|..+| .+++.+......... +..+...++ +.++++. .++.|..+|.. ........ .
T Consensus 186 ~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~-~~~~~~~~~-g~l~v~t----~~~gl~~~~~~-g~~~~~~~--~ 252 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWT-VTRPAISED-GTIYVTS----LDGHLYAINPD-GTEKWRFK--T 252 (330)
T ss_dssp TTCCEEEES---SSEEEEC-TTSCEEEEECCSSCC-CSCCEECTT-SCEEEEE----TTTEEEEECTT-SCEEEEEE--C
T ss_pred CCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcc-eeceEECCC-CeEEEEc----CCCeEEEECCC-CCEeEEee--C
Confidence 888755544 7899999 777766666544433 566666655 5666665 57788888743 22221111 1
Q ss_pred CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 309 SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 309 ~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
....+..+..++++... .++.+|.|..+|. +++...... .....+.++...+++.+.+.. ++.+++.....
T Consensus 253 ~~~~~~~~~~~~~g~l~--v~t~~ggl~~~d~-~g~~~~~~~---~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 253 GKRIESSPVIGNTDTIY--FGSYDGHLYAINP-DGTEKWNFE---TGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp SSCCCSCCEECTTSCEE--EECTTCEEEEECT-TSCEEEEEE---CSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred CCCccccceEcCCCeEE--EecCCCCEEEECC-CCcEEEEEE---cCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 22223345666666544 4567888999985 565433321 123456777777777766554 77777766544
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.36 E-value=0.00026 Score=73.15 Aligned_cols=166 Identities=15% Similarity=0.133 Sum_probs=107.0
Q ss_pred EEEEEcCCCCCEEEEEeCCC-------------------eEEEEECCCCeEEEEecC--CC-------CceEEEEEcCCC
Q psy14130 180 GYIEWHPTAENVVASAGFDY-------------------LIILWDVGKGEALTVIDC--HP-------DVINCLSFNRDG 231 (494)
Q Consensus 180 ~~~~~~p~~~~~l~s~s~d~-------------------~v~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~ 231 (494)
..+++.|.. .+++.++.++ .|..+|..+|+.+..++. |. .+.....+..+|
T Consensus 233 ~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 233 DSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 357888876 5788887766 499999999999888764 32 222222333366
Q ss_pred C---EEEEEeCCCeEEEEeCCCCceEEEeeecCCC-----------------------------------CceEEEEECC
Q psy14130 232 S---RLVTTCKDKTVRVLDPRTGLVISQGVCHPGT-----------------------------------RSSKAVFIGD 273 (494)
Q Consensus 232 ~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~ 273 (494)
+ .++.++.+|.+.++|.++|+.+......... ....+++.|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 5 6889999999999999999987443322100 0112567777
Q ss_pred CCeEEEEEe--------------------------------cCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCC
Q psy14130 274 TGRIVTTGF--------------------------------SRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHD 321 (494)
Q Consensus 274 ~~~l~~~g~--------------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (494)
.+.+++... ....++.|.-||+.+++..-.... ............
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~ 468 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTA 468 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEET
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeC
Confidence 565554210 001348899999988654333322 222233334456
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
+..+ +.|+.||.++.||.++++.+.++.
T Consensus 469 gg~v-f~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 469 GNLV-FQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp TTEE-EEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEE-EEECCcccchhhhhhcChhheEec
Confidence 7777 557899999999999999866553
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.36 E-value=0.0013 Score=61.09 Aligned_cols=166 Identities=8% Similarity=-0.116 Sum_probs=111.2
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--KTVRVLDPRTGLVI 254 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~ 254 (494)
.....+++.+.+.+++++-...+.|.+.|+........+.........++++|.+..|+.+... +.|...++. |+..
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~ 155 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDI 155 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCe
Confidence 3457889987654666776778899999987544333344344678899999966666555543 688888886 4433
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
..+....-.....+++.+++++++.+- ...+.|..+|+..... ..+... ........+++. +..||++-...+
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D---~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~ 229 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINE 229 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE--TTEEEEEETTTT
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEE---CCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE--CCEEEEEECCCC
Confidence 333222223378999999888999888 6788999999875322 222221 122345566674 467778888889
Q ss_pred cEEEEEeeCCCceEEe
Q psy14130 334 NIRYYELTNERPYIHF 349 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~~ 349 (494)
.|..++..+++....+
T Consensus 230 ~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 230 AIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTTCCCCEEE
T ss_pred eEEEEeCCCCcceEEE
Confidence 9999998777654444
No 255
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.35 E-value=0.00015 Score=69.19 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=108.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCC----c
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTR----S 265 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~----~ 265 (494)
..++.++.++.|..+|..+|+.+................ +..++.++.++.|..+|.++|+.+.......... .
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 467778889999999999999887776443222222222 4578888899999999999999877765433210 0
Q ss_pred eEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCC-----c---e-EEeEEeCCCCEEEEEEeCCCcEE
Q psy14130 266 SKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSS-----G---V-LFPYYDHDTRILFLAGKGDGNIR 336 (494)
Q Consensus 266 ~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~---v-~~~~~~~~~~~l~~~g~~dg~i~ 336 (494)
...... ++.+++ | ..++.|..+|..+++..-......... . + ..+.. .+..+ ..++.++.+.
T Consensus 182 ~~~~~~--~~~v~~-g---~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v-~~~~~~g~l~ 252 (376)
T 3q7m_A 182 SAPTTA--FGAAVV-G---GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVV-FALAYNGNLT 252 (376)
T ss_dssp CCCEEE--TTEEEE-C---CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEE-EEECTTSCEE
T ss_pred CCcEEE--CCEEEE-E---cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEE-EEEecCcEEE
Confidence 122222 244444 4 478999999998765432222110000 0 1 11122 24556 4556889999
Q ss_pred EEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 337 YYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 337 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
.+|..+++...... .....++....+..++.+.++.+..++..+
T Consensus 253 ~~d~~tG~~~w~~~-----~~~~~~~~~~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 253 ALDLRSGQIMWKRE-----LGSVNDFIVDGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp EEETTTCCEEEEEC-----CCCEEEEEEETTEEEEEETTCCEEEEETTT
T ss_pred EEECCCCcEEeecc-----CCCCCCceEECCEEEEEcCCCeEEEEECCC
Confidence 99999998654432 122445555433334444577788887766
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.34 E-value=0.00059 Score=63.37 Aligned_cols=221 Identities=10% Similarity=-0.053 Sum_probs=137.0
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLS 226 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~ 226 (494)
.+.|+..++..... +....+. ....+.+++|++....++.+-...+.|..+++..+.. ...+...-....+++
T Consensus 12 ~~~I~~i~l~~~~~-----~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKE-----NATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTS-----CCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCce-----EEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 34688899876531 1111111 2345678999986546667767778999999876532 122222234567899
Q ss_pred EcCCC-CEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEe
Q psy14130 227 FNRDG-SRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALE 305 (494)
Q Consensus 227 ~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~ 305 (494)
+.+.+ .++++-...+.|.++++.... ...+..........++..|.++.++.+.. ...+.|...++..... ..+.
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~--~~~~~I~r~~~dG~~~-~~~~ 161 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIII 161 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEEC--SSSCEEEEEETTSCSC-EEEE
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEec--CCCCEEEEEEcCCCCe-EEEE
Confidence 99754 455555567899999987543 23332223333788999988788888762 1357888888764322 2221
Q ss_pred eecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEe
Q psy14130 306 TVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKL 383 (494)
Q Consensus 306 ~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l 383 (494)
.........++++|++..||++-+..+.|..+|+..... ..+... ......++++..+ .++++. .+.+..++.
T Consensus 162 -~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~--~~~~P~glav~~~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 162 -NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKG--SLPHPFALTLFED-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp -CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS--CCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred -ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecC--CCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence 122345678999999999989988889999999875433 233321 1234678888644 455554 344444444
No 257
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.34 E-value=0.00062 Score=71.13 Aligned_cols=228 Identities=14% Similarity=0.021 Sum_probs=142.4
Q ss_pred EEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC----eEEEEecC
Q psy14130 142 AFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKG----EALTVIDC 217 (494)
Q Consensus 142 ~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~ 217 (494)
.+++.....|+..++.... .. .+......+..|+|++....++++-...+.|+.+++... .....+..
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~-------~~-~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSE-------YT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCC-------CE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCc-------ce-eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 3444445567777776542 22 222244567899999865456667677788999998653 22333443
Q ss_pred CCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 218 HPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.......|++++.+..|+ +-...+.|.+.++.... ...+..........+++.|..+.|+.+-+ ...+.|...++.
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~--g~~~~I~~~~~d 545 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLN 545 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETT
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecC--CCCCeEEEEecC
Confidence 455677899998775555 55567899999997544 44443333333789999998888988872 123789999887
Q ss_pred CCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccc
Q psy14130 297 DLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCE 376 (494)
Q Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 376 (494)
.... ..+. .........+++++.+..||++-...+.|..+++..... ..++.....-....+|++..+ .++++.-.
T Consensus 546 G~~~-~~lv-~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~-~lYwtD~~ 621 (791)
T 3m0c_C 546 GVDI-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDII 621 (791)
T ss_dssp SCCE-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETT-EEEEEETT
T ss_pred CCce-EEEE-eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCC-EEEEEECC
Confidence 5322 2221 123356788999999999989877888899999865543 333322111123457777554 55566544
Q ss_pred eeEEEEee
Q psy14130 377 IFRFFKLH 384 (494)
Q Consensus 377 ~~~~~~l~ 384 (494)
.-+|+.++
T Consensus 622 ~~~I~~~d 629 (791)
T 3m0c_C 622 NEAIFSAN 629 (791)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 45555554
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.31 E-value=0.00073 Score=62.41 Aligned_cols=183 Identities=9% Similarity=-0.030 Sum_probs=108.4
Q ss_pred ccEEEEEEcCCCCCEEEEEeC-CC-eEEEEECCCCeEEEEec-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy14130 177 RRVGYIEWHPTAENVVASAGF-DY-LIILWDVGKGEALTVID-CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV 253 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~-d~-~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 253 (494)
....++++.+++ +++++... ++ .|..+|..+++...... ........++..+++..+++-..++.|..+|..+++.
T Consensus 72 ~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 468899999998 56665543 22 47777877776543322 1223345566666555555555689999999876531
Q ss_pred -EEEeee--------cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 254 -ISQGVC--------HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 254 -~~~~~~--------~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+..... ..-.....+ +++++.++++- ...+.|..||+....................++++++|+.
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d---~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN---TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE---TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe---CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCE
Confidence 211100 011113444 77767888887 6788999999864111111111111134566889999976
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEe---cCCc
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFM---PKRG 369 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~---p~~~ 369 (494)
+ ++....+.|.++|.. ++.. . +.... .....++++|. |++.
T Consensus 226 ~-va~~~~~~V~~~~~~-G~~~-~-~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 226 Y-GATHIYNSVVRIAPD-RSTT-I-IAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp E-EECBTTCCEEEECTT-CCEE-E-EECGGGTCTTEEEEEECCSTTTTT
T ss_pred E-EEeCCCCeEEEECCC-CCEE-E-EeecccccCCceEEEEecccCCCC
Confidence 4 777778899999864 5431 1 11111 12457899998 7754
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.29 E-value=0.00016 Score=70.31 Aligned_cols=201 Identities=8% Similarity=-0.004 Sum_probs=120.0
Q ss_pred cEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC---C-eEEEEeCCCC
Q psy14130 178 RVGYIEWHPT--AENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD---K-TVRVLDPRTG 251 (494)
Q Consensus 178 ~V~~~~~~p~--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---~-~v~iwd~~~~ 251 (494)
....++|+|+ + ..|+.+...+.|+.+|+.+++..... ........++|+++|+++++.... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~-g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNY-DDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTT-CEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCC-CEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3468999985 3 24444444489999999877655443 345668999999999944444321 1 2333443322
Q ss_pred ce-EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 252 LV-ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.. ...+. .. .....+++.+.++.++++. ..++.|+.+|..+......+...........++++|+++.||++-.
T Consensus 218 ~~~~~~~~-~~-~~P~giavd~~~G~lyv~d---~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 218 FTERLSLC-NA-RGAKTCAVHPQNGKIYYTR---YHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TCCEEEEE-EC-SSBCCCEECTTTCCEEECB---TTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred eecccccc-cc-CCCCEEEEeCCCCeEEEEE---CCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 21 11222 12 2256788888567888777 5778999999875432122222222223346999999998889888
Q ss_pred CCCcEEEEEeeC--CCc--eEEeccccc------------CCCCeeEEEE---------ecCCceeeeccceeEEEEeeC
Q psy14130 331 GDGNIRYYELTN--ERP--YIHFLNQSL------------SGAPQRGLGF---------MPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~--~~~--~~~~~~~~~------------~~~~v~~~~~---------~p~~~~~~~~~~~~~~~~l~~ 385 (494)
..+.|+.+++.. +.. ...+..... .-....++++ .+++.+.++..+.-+|..+..
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 889999988763 221 011111100 1123577898 677777777654455555554
No 260
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.29 E-value=6.1e-06 Score=78.20 Aligned_cols=140 Identities=16% Similarity=0.034 Sum_probs=102.2
Q ss_pred CEEEEEeCCC----eEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFDY----LIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----------KDKTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d~----~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----------~d~~v~iwd~~~~~~~~ 255 (494)
..+++...++ +|.++|..+++.+.++.....+ .+.++||+++++.+. .++.|.+||+.+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3555555555 8889999999999998755555 799999999988886 37899999999999999
Q ss_pred EeeecC------CCCceEEEEECCCCeEEEEEecCCCCceEEE--EeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEE
Q psy14130 256 QGVCHP------GTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL--WDENDLNTPLALETVDSSSGVLFPYYDHDTRILFL 327 (494)
Q Consensus 256 ~~~~~~------~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 327 (494)
++.... +.....+.++|++.+++++.+ ..+..|.+ +|+.+ ...+..... ....|+++..++
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~--~~~~~v~V~~iD~~t------v~~i~v~~~---~~~~p~g~~~~~ 179 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLF--GSSAAAGLSVPGASD------DQLTKSASC---FHIHPGAAATHY 179 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC--SSSCEEEEEETTTEE------EEEEECSSC---CCCEEEETTEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEcc--CCCCeEEEEEEchhh------ceEEECCCc---eEEccCCCeEEE
Confidence 987541 122578999999888888762 12467888 99876 112221111 234567766767
Q ss_pred EEeCCCcEEEEEeeC
Q psy14130 328 AGKGDGNIRYYELTN 342 (494)
Q Consensus 328 ~g~~dg~i~~wd~~~ 342 (494)
+.+.||.+.+.|+.+
T Consensus 180 ~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 180 LGSCPASLAASDLAA 194 (368)
T ss_dssp CCCCTTSCEEEECCS
T ss_pred EEcCCCCEEEEECcc
Confidence 778888888888876
No 261
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.00047 Score=67.43 Aligned_cols=160 Identities=11% Similarity=0.090 Sum_probs=107.0
Q ss_pred cEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCeEEEEecCC---CCceEEEEE-------cCCCCEEEEEeCCC-----
Q psy14130 178 RVGYIEWHPT-AENVVASAGFDYLIILWDVGKGEALTVIDCH---PDVINCLSF-------NRDGSRLVTTCKDK----- 241 (494)
Q Consensus 178 ~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~l~s~~~d~----- 241 (494)
....|+|+|. ..+++++-...+.|++.|+.++.....+... ......|+| +++|..|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999984 4355555555578999999887765544321 235899999 99999777666543
Q ss_pred --eEEEEeCCC-CceE-----EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCC-------CCCC-----c
Q psy14130 242 --TVRVLDPRT-GLVI-----SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN-------DLNT-----P 301 (494)
Q Consensus 242 --~v~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~-------~~~~-----~ 301 (494)
.|.+++... +... ..+.... ....++..|+++.|+++. ..++.|..+|+. +... +
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd---~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNS---YEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEE---TTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEE---CCCCEEEEEecccccccccCceeeccccc
Confidence 266676443 2221 2222222 246778889778999888 688899999987 4332 0
Q ss_pred ------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 302 ------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 302 ------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
..+...........++|+|+++.||++-.....|+.++...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 01222223344678999999998888888889999987764
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.25 E-value=0.00064 Score=63.27 Aligned_cols=195 Identities=9% Similarity=-0.036 Sum_probs=115.5
Q ss_pred ccEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCceEEEEEcC-CCCEEEEEeC----------
Q psy14130 177 RRVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDC-----HPDVINCLSFNR-DGSRLVTTCK---------- 239 (494)
Q Consensus 177 ~~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~-~~~~l~s~~~---------- 239 (494)
..+.++++.+ ++ + |+.+...+.|..+|..++.. ..+.. .......+++.+ +|++.++...
T Consensus 80 ~~p~gi~~~~~~g-~-l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNN-Q-LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTT-E-EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCC-c-EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 3578999998 55 4 44454455688888765532 22211 123478899999 9987776533
Q ss_pred -------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC--ceeEeeecCC
Q psy14130 240 -------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT--PLALETVDSS 310 (494)
Q Consensus 240 -------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~ 310 (494)
++.|..||..+++.......-.. ...+++.+++..++++. ...+.|.+|++..... ...+.. ..
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~--p~gia~~~dg~~lyv~d---~~~~~I~~~~~~~~~~~~~~~~~~--~~ 229 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELHV--PGGAEVSADSSFVLVAE---FLSHQIVKYWLEGPKKGTAEVLVK--IP 229 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEESC--CCEEEECTTSSEEEEEE---GGGTEEEEEESSSTTTTCEEEEEE--CS
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCcc--CcceEECCCCCEEEEEe---CCCCeEEEEECCCCcCCccceEEe--CC
Confidence 36799999887764332222122 57789999866677776 5678999999875321 111111 12
Q ss_pred CceEEeEEeCCCCEEEEEEeC----------CCcEEEEEeeCCCceEEeccccc-CCCCeeEEEEecCCceeeec--cce
Q psy14130 311 SGVLFPYYDHDTRILFLAGKG----------DGNIRYYELTNERPYIHFLNQSL-SGAPQRGLGFMPKRGCDVTQ--CEI 377 (494)
Q Consensus 311 ~~v~~~~~~~~~~~l~~~g~~----------dg~i~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~~~~--~~~ 377 (494)
. ...++++++|+.. ++... .+.|..+|.. ++.+..+...-. ....+.++++ .++.+.++. ...
T Consensus 230 g-P~gi~~d~~G~l~-va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 230 N-PGNIKRNADGHFW-VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp S-EEEEEECTTSCEE-EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred C-CCCeEECCCCCEE-EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 2 6778999999865 55433 4567777753 444332221100 0134666666 466666664 445
Q ss_pred eEEEEeeC
Q psy14130 378 FRFFKLHT 385 (494)
Q Consensus 378 ~~~~~l~~ 385 (494)
+..+++..
T Consensus 306 i~~~~~~~ 313 (322)
T 2fp8_A 306 VGILVYDK 313 (322)
T ss_dssp EEEEEC--
T ss_pred eEEEeccc
Confidence 55555443
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.25 E-value=0.00049 Score=66.91 Aligned_cols=228 Identities=9% Similarity=0.071 Sum_probs=132.6
Q ss_pred CcEEEEEEc-CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC---C-eEEEEECCCCeE-EE
Q psy14130 140 GGAFLVLPI-HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD---Y-LIILWDVGKGEA-LT 213 (494)
Q Consensus 140 ~g~~~~~~~-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d---~-~v~iwd~~~~~~-~~ 213 (494)
+|.+.++.. +.|+.++..++.. ..+.+......+++|++++ +++++.... . .+...+...+.. ..
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v--------~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYV--------DIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEE--------EEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred CCEEEEEeCCCCEEEEECCCCEE--------EEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECCCCeeccc
Confidence 466666655 6788898876522 2233344568899999999 566655421 1 233333322111 01
Q ss_pred EecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEee-ecCCCCceEEEEECCCCeEEEEEecCCCCceEE
Q psy14130 214 VIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGV-CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVG 291 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~ 291 (494)
.+. .......++++| +|.++++-..++.|+.+|..++.....+. .........+++.|+++.++++- ...+.|+
T Consensus 223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad---~~~~~I~ 298 (433)
T 4hw6_A 223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY---NGKHCIY 298 (433)
T ss_dssp EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE---TTTTEEE
T ss_pred ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe---CCCCEEE
Confidence 121 234456789999 77766666678899999998787533332 22222234699999977788887 6788999
Q ss_pred EEeCCCCC----CceeEeee-c------------CCCceEEeEE---------eCCCCEEEEEEeCCCcEEEEEeeCCCc
Q psy14130 292 LWDENDLN----TPLALETV-D------------SSSGVLFPYY---------DHDTRILFLAGKGDGNIRYYELTNERP 345 (494)
Q Consensus 292 iwd~~~~~----~~~~~~~~-~------------~~~~v~~~~~---------~~~~~~l~~~g~~dg~i~~wd~~~~~~ 345 (494)
.++..... .+..+... . .-.....+++ ++++. ||++-...+.|+.++. ++..
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT-TSEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC-CCCE
Confidence 98865211 11112111 0 0123556788 55554 5588777888999884 4432
Q ss_pred eEEeccccc---------------CCCCeeEEEEe-cCCceeeeccceeEEEEe
Q psy14130 346 YIHFLNQSL---------------SGAPQRGLGFM-PKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 346 ~~~~~~~~~---------------~~~~v~~~~~~-p~~~~~~~~~~~~~~~~l 383 (494)
..+...-. .-....+|++. +++.+.++..+.-||.++
T Consensus 377 -~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 377 -TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp -EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred -EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 22221100 01346889999 678888876444444433
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.23 E-value=0.0027 Score=59.73 Aligned_cols=196 Identities=4% Similarity=-0.150 Sum_probs=123.1
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++.... ....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~-------~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCS-------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cccEEEEEeccCCceEEEecCCCC-------ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 3445555543 357777766542 1111222223456889988665677777778899999987544333344
Q ss_pred CCCCceEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTC-KD-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
..-.....++++|.+..|+.+. .. +.|..+++.... ...+..........+++.+++++|+.+- ...+.|..+|
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD---~~~~~I~~~~ 231 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD---AKHHVIERAN 231 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEE---CCCCEEEEEe
Confidence 4446678999999655555444 44 789999887433 3333222222378899999889999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+..... ..+.. ........+++ ++..||++-...+.|..++..+++....+
T Consensus 232 ~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCce-EEEEe-CCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 875332 22211 12334566666 34577788888888988886677654443
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.23 E-value=0.0024 Score=61.06 Aligned_cols=197 Identities=4% Similarity=-0.153 Sum_probs=123.4
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++.... ....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~-------~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCC-------EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC
T ss_pred CCCeEEEEeCCCCcEEEEecCCCC-------cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec
Confidence 3445555543 346777766542 1111222223456788887665667777777889998886544333344
Q ss_pred CCCCceEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTC-KD-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
........++++|.+..|+.+. .. +.|..+++.... ...+..........+++.+++++|+.+- ...+.|..+|
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD---~~~~~I~~~d 274 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD---AKHHVIERAN 274 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEE---TTTTEEEEEC
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEE---CCCCEEEEEe
Confidence 4446789999999766655554 34 688888887443 2233222222378899998888999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
+..... ..+.. ........+++ ++..||++-...+.|..++..+++....+.
T Consensus 275 ~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCee-EEEEE-CCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 875332 22221 12344566677 345677888888999999876776544443
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.22 E-value=0.0046 Score=59.39 Aligned_cols=202 Identities=7% Similarity=-0.135 Sum_probs=125.7
Q ss_pred CCcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 139 GGGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 139 ~~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.++.+.++.. +.|..+++....... .....+.........+++.+.+.+++++-...+.|.+.++........+.
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~---~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~ 198 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR 198 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------C---CCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCC---cceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe
Confidence 3455555543 346667765421000 11122222345678899998554677777778899999987655444444
Q ss_pred CCCCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEe
Q psy14130 217 CHPDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 217 ~h~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
........|+++|.+..|+.+.. .+.|...++..... ..+....-.....+++.+++++|+.+- ...+.|..+|
T Consensus 199 ~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d 274 (400)
T 3p5b_L 199 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSID 274 (400)
T ss_dssp CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEe
Confidence 44556899999997666665553 37899999874433 333222222378999998888999988 6788999999
Q ss_pred CCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 295 ENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
+....................+++ ++..||++-...+.|..+|..+++....+
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 875333222221112234455555 45677788888889999998777764444
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0004 Score=67.52 Aligned_cols=156 Identities=13% Similarity=0.074 Sum_probs=104.0
Q ss_pred cEEEEEEcC-CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCC
Q psy14130 178 RVGYIEWHP-TAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-DK----TVRVLDPRTG 251 (494)
Q Consensus 178 ~V~~~~~~p-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d~----~v~iwd~~~~ 251 (494)
....|+++| ++ ..|+.+...+.|+.+|+..+....... .......|+|+++|++|+.+.. ++ .+..++. .+
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 346889998 34 345555444889999998766444333 5567889999999996666654 21 3444443 33
Q ss_pred ceE--EEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 252 LVI--SQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 252 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
... ..+.... ....+++.|+++.++++. ..++.|..+|...... ..+...........++++|++++||++-
T Consensus 215 ~~~~~~~l~~~~--~p~giavdp~~g~lyv~d---~~~~~V~~~~~~~~~~-~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELTKGQ--NCNGAETHPINGELYFNS---WNAGQVFRYDFTTQET-TPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp TSCSEEEEEECS--SCCCEEECTTTCCEEEEE---TTTTEEEEEETTTTEE-EEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceeeeeeeccCC--CceEEEEeCCCCEEEEEE---CCCCEEEEEECCCCcE-EEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 321 2232221 257788888668888887 5788999999875322 1222222334577899999999888988
Q ss_pred eCCCcEEEEEeeC
Q psy14130 330 KGDGNIRYYELTN 342 (494)
Q Consensus 330 ~~dg~i~~wd~~~ 342 (494)
...+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 8889999998874
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.00091 Score=65.02 Aligned_cols=229 Identities=10% Similarity=0.037 Sum_probs=129.0
Q ss_pred CcEEEEEEc-CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCCeE-EE
Q psy14130 140 GGAFLVLPI-HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDY----LIILWDVGKGEA-LT 213 (494)
Q Consensus 140 ~g~~~~~~~-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~----~v~iwd~~~~~~-~~ 213 (494)
++.+.+... +.|+.+|...+. +..+.........++|++++..++++...++ .+.+.+....-. ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~--------v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEY--------VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTE--------EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred CCeEEEEeCCCcEEEEECCCCE--------EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence 355666555 678888887652 1222224456789999999832455444222 344444322111 12
Q ss_pred EecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 214 VIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.+.. ......++++| +|.++++-..++.|..+|+..+................+++.|++..++++. ...+.|..
T Consensus 221 ~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d---~~~~~I~~ 296 (430)
T 3tc9_A 221 ELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV---VNQHYILR 296 (430)
T ss_dssp EEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE---TTTTEEEE
T ss_pred eecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE---CCCCEEEE
Confidence 2221 23456788999 7777777767899999999876642222222222367899999977688887 67889999
Q ss_pred EeCCCCCC----ceeEeeecC-------------CCceE-EeEEe--------CCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 293 WDENDLNT----PLALETVDS-------------SSGVL-FPYYD--------HDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 293 wd~~~~~~----~~~~~~~~~-------------~~~v~-~~~~~--------~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
++...... +..+..... -.... .++.. +++ .||++-...+.|+.++ .+++.
T Consensus 297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~-~~G~v- 373 (430)
T 3tc9_A 297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILT-PQGRV- 373 (430)
T ss_dssp EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEEC-TTSEE-
T ss_pred EeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEEC-CCCcE-
Confidence 88653211 111111100 01122 34443 233 4557777778888888 34432
Q ss_pred EEeccc----cc-----------CCCCeeEEEEec-CCceeeeccceeEEEEe
Q psy14130 347 IHFLNQ----SL-----------SGAPQRGLGFMP-KRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 347 ~~~~~~----~~-----------~~~~v~~~~~~p-~~~~~~~~~~~~~~~~l 383 (494)
...... .. .-....+|++.| ++.++++..+.-||.++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 222211 00 012478999999 57777776444444443
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.13 E-value=0.00017 Score=75.65 Aligned_cols=204 Identities=12% Similarity=0.023 Sum_probs=110.7
Q ss_pred cccc-cEEEEEEc-CCCCCEEEEEeCCC----eEEEEECCCC-eEEE-EecCCCCceEEEEEcCCCCEEEEEeCC-----
Q psy14130 174 GHKR-RVGYIEWH-PTAENVVASAGFDY----LIILWDVGKG-EALT-VIDCHPDVINCLSFNRDGSRLVTTCKD----- 240 (494)
Q Consensus 174 ~h~~-~V~~~~~~-p~~~~~l~s~s~d~----~v~iwd~~~~-~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~d----- 240 (494)
+|.- .+...+|| |+|..++++.+.+| +|+++|+.++ +.+. .+. ....+++|+|||+.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 67889999 99953444444333 5999999988 6321 111 123468899999988877765
Q ss_pred CeEEEEeCCCCce--EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce--eEeeecCCCceEEe
Q psy14130 241 KTVRVLDPRTGLV--ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL--ALETVDSSSGVLFP 316 (494)
Q Consensus 241 ~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~v~~~ 316 (494)
..|..+++.++.. ...+............|++++..|+.+.. ......|.++|+.+..... .............+
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~-~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~ 325 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ-SPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDV 325 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE-CSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec-CCCCceEEEEECCCCCCCceeEEeecCCCCceEEE
Confidence 3688889887642 22222222222567789999777776652 2245678999987642211 11111112233334
Q ss_pred EEeCCCCEEEEEEeCC--C--cEEEEEeeCCCceEE-ecccccCCCCeeEEEEecCCceeee--ccceeEEEEee
Q psy14130 317 YYDHDTRILFLAGKGD--G--NIRYYELTNERPYIH-FLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLH 384 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~d--g--~i~~wd~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~ 384 (494)
.|+. ++.|++....+ + .|..+|+.++..... ++.. .....+.++.+..+ .++++ .++..++|.+.
T Consensus 326 ~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 326 QMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVRSN-YLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEECSS-EEEEEEEETTEEEEEEEE
T ss_pred eeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEECC-EEEEEEEeCCEEEEEEEe
Confidence 4333 66665665554 3 455556544211112 2221 11123455555533 23333 26666666554
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.12 E-value=0.01 Score=62.60 Aligned_cols=195 Identities=7% Similarity=0.017 Sum_probs=121.1
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec----CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID----CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~ 251 (494)
...|.++...+++ ++|..|+.++-|..+|..+++...... .....|.++...++|.+.+.+ . +-|.+||..++
T Consensus 405 ~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 405 SNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQR 481 (795)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTT
T ss_pred CccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCC
Confidence 3579999998887 546667777789999998876433221 134679999999888866554 4 45889999877
Q ss_pred ceEEEeee-----cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee-----ecCCCceEEeEEeCC
Q psy14130 252 LVISQGVC-----HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-----VDSSSGVLFPYYDHD 321 (494)
Q Consensus 252 ~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 321 (494)
+....... -....+..+...++ +.+.++. . +-|..||..+... .... .-....|.++..+++
T Consensus 482 ~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt----~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 482 SFTTIEKEKDGTPVVSKQITTLFRDSH-KRLWIGG----E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp EEEECCBCTTCCBCCCCCEEEEEECTT-CCEEEEE----S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTT
T ss_pred eEEEccccccccccCCceEEEEEECCC-CCEEEEe----C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCC
Confidence 64322211 11122566655555 5666655 3 4588888765322 1110 012246888888999
Q ss_pred CCEEEEEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 322 TRILFLAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 322 ~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|... ++. .. -|..||..+++. ..+.. .-.....|.++...++|.+.++...-+..|+...
T Consensus 554 g~lW-igT-~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~ 614 (795)
T 4a2l_A 554 GIIW-VGT-RE-GFYCFNEKDKQI-KRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPET 614 (795)
T ss_dssp SCEE-EEE-SS-CEEEEETTTTEE-EEECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEETTT
T ss_pred CCEE-EEe-CC-CceeECCCCCcE-EEeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcCCC
Confidence 8876 433 33 588888776642 22211 1112356888988888887777655555555443
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.11 E-value=0.0083 Score=62.69 Aligned_cols=202 Identities=7% Similarity=-0.137 Sum_probs=125.7
Q ss_pred CcEEEEEEcC--cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPIH--RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~~--~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.++++... .|+.+++....... .....+.........|++.+.+.+++++-...+.|.+.++........+..
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~---~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~ 511 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 511 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC
T ss_pred CCeeEEeeccceeEEEEeccCCCCCc---ceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC
Confidence 4555555543 46666665421100 111222223345678999887766777777889999999975544444444
Q ss_pred CCCceEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK-D-KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.......|+++|.+..|+.+.. . +.|...++.... ...+....-.....+++.+.+++|+++- .....|...|+
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~ 587 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDV 587 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEET
T ss_pred CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEec
Confidence 4566899999997666665553 3 789999987443 3333333323378999998888999987 67889999998
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
....................+++ ++..||++-...+.|...+..+++....+.
T Consensus 588 dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 588 NGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 75433222211111233445555 455788888888899999887876654443
No 272
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.10 E-value=0.00017 Score=67.18 Aligned_cols=174 Identities=12% Similarity=0.063 Sum_probs=111.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEE
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAV 269 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 269 (494)
..+..++.++.|..+|.. ++.......+...+.++...+++. +..++.++.|..+|.. ++.+..+...... +..+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~-~~~~~ 183 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI-TSAAS 183 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC-CSCCE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc-eeeeE
Confidence 367778889999999998 777777665666677778887776 5567788999999999 8877666544433 55555
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..++ +. +..| + +.|..+| .+....... ......+.++..++++... + ++.++.|..+|. +++.+...
T Consensus 184 ~d~~-g~-l~v~---t--~~l~~~d-~~g~~~~~~--~~~~~~~~~~~~~~~g~l~-v-~t~~~gl~~~~~-~g~~~~~~ 250 (330)
T 3hxj_A 184 IGKD-GT-IYFG---S--DKVYAIN-PDGTEKWNF--YAGYWTVTRPAISEDGTIY-V-TSLDGHLYAINP-DGTEKWRF 250 (330)
T ss_dssp ECTT-CC-EEEE---S--SSEEEEC-TTSCEEEEE--CCSSCCCSCCEECTTSCEE-E-EETTTEEEEECT-TSCEEEEE
T ss_pred EcCC-CE-EEEE---e--CEEEEEC-CCCcEEEEE--ccCCcceeceEECCCCeEE-E-EcCCCeEEEECC-CCCEeEEe
Confidence 5444 44 4456 3 7789999 443332221 1223457778888887655 3 456788888873 45443332
Q ss_pred cccccCCCCeeEEEEecCCceeeec-cceeEEEEe
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKL 383 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l 383 (494)
.. ....+.++.+.+++.+.+.. ++.+..++.
T Consensus 251 ~~---~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 251 KT---GKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EC---SSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred eC---CCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 21 12234456666677666554 445666653
No 273
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.06 E-value=0.0099 Score=60.59 Aligned_cols=219 Identities=9% Similarity=-0.050 Sum_probs=140.6
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFN 228 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~ 228 (494)
+.|+..++.+... .....+. .-..+..++|++.+..++++-..++.|..+++........+.........|+++
T Consensus 15 ~~I~~i~l~~~~~-----~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNN-----NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTC-----EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred CcEEEEECCCCCc-----ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEE
Confidence 4688888876521 1111122 234578999999765666676778999999987554433344333467789998
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 229 RDGSRL-VTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 229 ~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
+.+..| ++-...+.|.+.++.... ...+..........++..|..+.++.+-+ +..+.|...++..... ..+.
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~--g~~~~I~r~~~dG~~~-~~l~-- 162 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEW--GGKPKIDRAAMDGSER-TTLV-- 162 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-EEEE--
T ss_pred eCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCC--CCCCEEEEEeCCCCce-EEEE--
Confidence 865555 444557899999987544 22332223333789999998788888873 2357888888865433 2222
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
........++++++++.||++-...+.|..+|+..... . .+.. ......++++.. +.+.++.-..-+|+.++
T Consensus 163 ~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~-v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 163 PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E-VIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E-EEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E-Eeec--cCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 24456788999999999989988889999999976543 2 2222 123356888876 45666653333444443
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.05 E-value=0.00036 Score=72.08 Aligned_cols=213 Identities=8% Similarity=-0.054 Sum_probs=111.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEe-CC-----CeEEEEECCCCeEEEEe----cCCC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAG-FD-----YLIILWDVGKGEALTVI----DCHP 219 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d-----~~v~iwd~~~~~~~~~~----~~h~ 219 (494)
.+.+||..+..- ..+..+.. ...-.+++..+++ ++++.|+ .+ ..+.+||+.+.+-...- ....
T Consensus 266 ~v~~yd~~t~~W-----~~~~~~~~-~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~ 338 (656)
T 1k3i_A 266 KTSLYDSSSDSW-----IPGPDMQV-ARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPML 338 (656)
T ss_dssp CEEEEEGGGTEE-----EECCCCSS-CCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGC
T ss_pred ceEEecCcCCce-----eECCCCCc-cccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccc
Confidence 589999876521 11111211 1112345566777 6888888 44 57999999887643320 0000
Q ss_pred CceEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCCeEEEEEe
Q psy14130 220 DVINCLSFNRDGSRLVTTCKD---------KTVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTGRIVTTGF 282 (494)
Q Consensus 220 ~~v~~l~~~~~~~~l~s~~~d---------~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~g~ 282 (494)
..-....+..++..++.++.+ ..+..||+.+.........+.. .....+.+...++++++.|
T Consensus 339 ~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~G- 417 (656)
T 1k3i_A 339 TADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFG- 417 (656)
T ss_dssp CCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEEC-
T ss_pred cccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEe-
Confidence 000001122345555555443 4578899988764433322211 1123444445457888887
Q ss_pred cCCCCc-----------eEEEEeCCCCCCceeE-eeecCCCceEEeEEeCCCCEEEEEEeCC-----------CcEEEEE
Q psy14130 283 SRHSDR-----------QVGLWDENDLNTPLAL-ETVDSSSGVLFPYYDHDTRILFLAGKGD-----------GNIRYYE 339 (494)
Q Consensus 283 ~~~~d~-----------~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----------g~i~~wd 339 (494)
+.++ .|.+||..+....... ........-..++..|+++.+ +.|+.+ ..+.+||
T Consensus 418 --G~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~-v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 418 --GSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF-ITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp --CBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE-EECCBSBCCTTCCCSBCCCCEEEE
T ss_pred --CCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEE-EECCcccCcCcCCCCcccceEEEc
Confidence 4321 6788887653321111 011121222344566888877 676644 4689999
Q ss_pred eeCCCceEEecccccCCCC-eeEEEEecCCceeeecc
Q psy14130 340 LTNERPYIHFLNQSLSGAP-QRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~~~~~ 375 (494)
..+.+- ..+........ .....+.|++.+++.+.
T Consensus 495 p~t~~W--~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 495 PEQDTF--YKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp GGGTEE--EECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCce--eecCCCCCccccccHhhcCCCcEEEecCC
Confidence 988652 23333222222 23455678999888864
No 275
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.01 E-value=0.023 Score=59.91 Aligned_cols=194 Identities=11% Similarity=0.013 Sum_probs=121.1
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--------CCCceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC--------HPDVINCLSFNRDGSRLVTTCKDKTVRVLD 247 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd 247 (494)
...|.++...++| + |-.|+.++-|..||..+++....... ....|.++...++|++|..|+.++-|..||
T Consensus 356 ~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDKDK-N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECTTS-C-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECCCC-C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 4569999999887 3 55577777899999887654332211 236799999998998677788878899999
Q ss_pred CCCCceEEEeee---cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-----cCCCceEEeEEe
Q psy14130 248 PRTGLVISQGVC---HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-----DSSSGVLFPYYD 319 (494)
Q Consensus 248 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~ 319 (494)
..+++...-... .....+.++...++ +.+.++. . +-+.+||..+... ...... -....|.++..+
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt----~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGT----L-SALVRFNPEQRSF-TTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEE----S-SCEEEEETTTTEE-EECCBCTTCCBCCCCCEEEEEEC
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEe----c-CceeEEeCCCCeE-EEccccccccccCCceEEEEEEC
Confidence 988764332110 11222566665555 5666655 3 4588899765321 111100 022568888899
Q ss_pred CCCCEEEEEEeCCCcEEEEEeeCCCceEEecc----cccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 320 HDTRILFLAGKGDGNIRYYELTNERPYIHFLN----QSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
++|... +.. . +-|..||..+++. .+.. .......|.++...++|.+.++..+-+..|+.
T Consensus 507 ~~g~lW-igt-~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~ 569 (795)
T 4a2l_A 507 SHKRLW-IGG-E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNE 569 (795)
T ss_dssp TTCCEE-EEE-S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEET
T ss_pred CCCCEE-EEe-C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECC
Confidence 998876 433 3 4588899887653 2211 11123568888888888766655434444443
No 276
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.00011 Score=75.97 Aligned_cols=182 Identities=9% Similarity=0.080 Sum_probs=112.2
Q ss_pred CCeEEEEECCCCeEEEEecCCC---C----------------------------ceEEEEEcCCCCEEEEEeCCC-----
Q psy14130 198 DYLIILWDVGKGEALTVIDCHP---D----------------------------VINCLSFNRDGSRLVTTCKDK----- 241 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~---~----------------------------~v~~l~~~~~~~~l~s~~~d~----- 241 (494)
++.|..+|..+|+.+..+.... . ....++++++..+++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999988775210 0 112468888888888888776
Q ss_pred --------------eEEEEeCCCCceEEEeee--cCC------CCceEEEEECCCC--eEEEEEecCCCCceEEEEeCCC
Q psy14130 242 --------------TVRVLDPRTGLVISQGVC--HPG------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 242 --------------~v~iwd~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.|..+|+++|+.+-.+.. |.. ..........++. .+++.+ +.+|.++++|.++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~---~~~G~l~~lD~~t 333 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA---PKNGFFYVLDRTN 333 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC---CTTSEEEEEETTT
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE---CCCCEEEEEECCC
Confidence 399999999998877754 221 1011111222322 256666 6899999999888
Q ss_pred CCCceeEe--------eec--CC------------------------CceEEeEEeCCCCEEEEEE--------------
Q psy14130 298 LNTPLALE--------TVD--SS------------------------SGVLFPYYDHDTRILFLAG-------------- 329 (494)
Q Consensus 298 ~~~~~~~~--------~~~--~~------------------------~~v~~~~~~~~~~~l~~~g-------------- 329 (494)
++...... .++ .. .....++++|+...+|+..
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGC
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccc
Confidence 65431111 000 00 0011268899988887632
Q ss_pred ---------------------eCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeCC
Q psy14130 330 ---------------------KGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHTT 386 (494)
Q Consensus 330 ---------------------~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~~ 386 (494)
..+|.|..||+.+++...+... ..+..+..+...+.++.. .++.++.|+..++
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC----CCCCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 1348899999999986544322 233444444444443333 3788888887763
No 277
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.004 Score=63.45 Aligned_cols=221 Identities=10% Similarity=-0.022 Sum_probs=130.1
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE-EEEecCCCCceEEEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA-LTVIDCHPDVINCLSF 227 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~l~~ 227 (494)
+.|+..++..... ....+...-..+..++|++.+..++++-...+.|..+++..... ...+...-.....+++
T Consensus 18 ~~I~~i~~~~~~~------~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 18 RDLRLVDATNGKE------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 91 (619)
T ss_dssp SBEEEECCC---------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred ccEEEEeCCCCcc------eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Confidence 3588888765421 01112223345789999997645555655678899999875532 2333333357889999
Q ss_pred cCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee
Q psy14130 228 NRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET 306 (494)
Q Consensus 228 ~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 306 (494)
++.+..|+ +-...+.|.+.++.... ...+..........+++.|.++.++.+.+ ...+.|...++..... ..+..
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~--g~~~~I~r~~~dG~~~-~~l~~ 167 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIIIN 167 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-EEEEC
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEecCCCeEEEecc--CCCCEEEEEECCCCce-EEEEe
Confidence 99655555 44567899999987543 33333222233788999998888988874 2346777777764322 22221
Q ss_pred ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 307 VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
........++++++++.||++-...+.|..+|+..... ..+... . .....++++..+ .+.++.-..-+|+.++
T Consensus 168 -~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~-~-~~~P~gi~~~~~-~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 168 -SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKG-S-LPHPFALTLFED-ILYWTDWSTHSILACN 240 (619)
T ss_dssp -SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE-C-----------CCCEEESSS-EEEEECTTTCSEEEEE
T ss_pred -CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc-EEEEeC-C-CCCceEEEEeCC-EEEEecCCCCEEEEEE
Confidence 23356788999999999989988888999999876433 222221 1 122357788766 5555643333344433
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.91 E-value=0.014 Score=53.99 Aligned_cols=196 Identities=6% Similarity=-0.141 Sum_probs=123.4
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
++.+..+.. +.|..++....... ...+...-.....+++.+.+.+++++-...+.|.+.++........+..
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~------~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~ 119 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ 119 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCC------CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCcEEEEEccCCCce------EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC
Confidence 344555443 34667776554211 1111112234567888876546777777778999999865433333334
Q ss_pred CCCceEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 218 HPDVINCLSFNRDGSRLVTTCK--DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 218 h~~~v~~l~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.......++++|.+..|+.+.. .+.|...++.... ...+....-.....+++.+++++++.+- ...+.|..+|+
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD---~~~~~I~~~d~ 195 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNL 195 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEET
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEE---CCCCEEEEEcC
Confidence 4567789999997666666553 5788888886433 3333222222368999999889999988 78899999998
Q ss_pred CCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 296 NDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 296 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..... ..+.. ........+++. +..+|.+-...+.|..++..+++....+
T Consensus 196 dG~~~-~~~~~-~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 196 DGTNR-QAVVK-GSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TSCSC-EEEEC-SCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCce-EEEec-CCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 75332 22221 123445566664 4567788878889999999887764444
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.91 E-value=0.00099 Score=68.74 Aligned_cols=226 Identities=12% Similarity=0.028 Sum_probs=121.2
Q ss_pred cEEEEEcCCCCCCCCcccceEec-ccccccEEEEEEcCCCCCEEEEEeC-CCeEEEEECCCCeEEEEecCCCC-ceEEEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEWHPTAENVVASAGF-DYLIILWDVGKGEALTVIDCHPD-VINCLS 226 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~-~v~~l~ 226 (494)
.+.+||..++.-. .+..+ ..+.....++++..++ .+++.|+. +..+.+||+.+.+-...-..+.. .-.+++
T Consensus 220 ~~~~yd~~t~~w~-----~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~ 293 (656)
T 1k3i_A 220 LTSSWDPSTGIVS-----DRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSA 293 (656)
T ss_dssp EEEEECTTTCCBC-----CCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEE
T ss_pred EEEEEeCCCCcEE-----eCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECCCCCccccccceE
Confidence 4788998877431 22222 1233333456778887 68888884 45899999987754332111111 123556
Q ss_pred EcCCCCEEEEEe-CC-----CeEEEEeCCCCceEEE-----eeecCCCCceEEEEECCCCeEEEEEecC------CCCce
Q psy14130 227 FNRDGSRLVTTC-KD-----KTVRVLDPRTGLVISQ-----GVCHPGTRSSKAVFIGDTGRIVTTGFSR------HSDRQ 289 (494)
Q Consensus 227 ~~~~~~~l~s~~-~d-----~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~g~~~------~~d~~ 289 (494)
..++|++++.|+ .+ ..+.+||+.+++-... ....... . ..++..+ +++++.|... .....
T Consensus 294 ~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~-~~~~~~~-~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 294 TMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K-QGLYRSD-NHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp ECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T-TGGGTTT-CSCCEEECGGGCEEECCSSSE
T ss_pred EecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c-cceeecC-CceEEEECCCCcEEEecCccc
Confidence 677899999988 34 5799999988763321 0000000 0 0111122 3444444100 12346
Q ss_pred EEEEeCCCCCCceeEeeecC-------CCceEEeEEeCCCCEEEEEEeCCC-----------cEEEEEeeCCCceEEec-
Q psy14130 290 VGLWDENDLNTPLALETVDS-------SSGVLFPYYDHDTRILFLAGKGDG-----------NIRYYELTNERPYIHFL- 350 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~g~~dg-----------~i~~wd~~~~~~~~~~~- 350 (494)
+..||..+............ ...-.++.|...+..|++.|+.++ .|.+||..+.+-. ...
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~ 449 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT-VFAS 449 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE-EECT
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee-EEcc
Confidence 78888876432111111100 112234455554555668887543 5778887766532 211
Q ss_pred ccccCCCCeeEEEEecCCceeeecc-------------ceeEEEEeeC
Q psy14130 351 NQSLSGAPQRGLGFMPKRGCDVTQC-------------EIFRFFKLHT 385 (494)
Q Consensus 351 ~~~~~~~~v~~~~~~p~~~~~~~~~-------------~~~~~~~l~~ 385 (494)
........-.+.+..|++.+++.+. ..+.+|+..+
T Consensus 450 ~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 450 NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp TCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 1222222334567788998888763 3467888766
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.91 E-value=2.3e-05 Score=81.19 Aligned_cols=199 Identities=14% Similarity=-0.020 Sum_probs=117.1
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC----CeEEEEecCCCCceEEEEEcCC-CCEEEEEeCCCeEEEEeCCCC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGK----GEALTVIDCHPDVINCLSFNRD-GSRLVTTCKDKTVRVLDPRTG 251 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~d~~v~iwd~~~~ 251 (494)
..+..|+|++.+..++++-...+.|+.+++.. ......+.........|++.+. ++++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34568899987644555555668899999875 2222222222234567888864 445555556788999998755
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.. ..+..........+++.|.++.|+.+. ... +.|.++++....... +. .........++++|++..||++-.
T Consensus 486 ~~-~~l~~~~~~~P~giavDp~~g~ly~td---~~~~~~I~~~~~dG~~~~~-l~-~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 486 KR-KTLFREQGSKPRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYS-LV-TENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CE-EEECCCSSCCCCCEECCSSSSCCEECC---CSSSCCEEBCCSSSCCCCE-ES-CSSCSSCCCEEECTTTCCEEEEET
T ss_pred ce-EEEEeCCCCCcceEEEccCCCcEEEcc---cCCCCeEEEEeCCCCCeeE-EE-eCCCCCccEEEEeccCCEEEEEec
Confidence 43 333222222367788888778888776 233 678888776432211 11 112244667899999888889888
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEe
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKL 383 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l 383 (494)
..+.|..+++..... ..++..........+|++..+ .++++.-+.-+|+.+
T Consensus 560 ~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 560 KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp TTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred CCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 888999999875432 333322111223456777665 444444333334433
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.85 E-value=0.0031 Score=63.71 Aligned_cols=146 Identities=12% Similarity=0.065 Sum_probs=92.2
Q ss_pred eEEEEECCCCeEEEEecC--CC--------CceEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceEEEeeecCC----
Q psy14130 200 LIILWDVGKGEALTVIDC--HP--------DVINCLSFNRDGS---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG---- 262 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~--h~--------~~v~~l~~~~~~~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~---- 262 (494)
.|..+|..+|+.+..++. |. .++. +....+|+ .++.++.+|.+.++|..+|+.+........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 699999999998887753 21 1221 22224674 577889999999999999998766543220
Q ss_pred --------CC--------------------------ceEEEEECCCCeEEEEEec-------------------------
Q psy14130 263 --------TR--------------------------SSKAVFIGDTGRIVTTGFS------------------------- 283 (494)
Q Consensus 263 --------~~--------------------------~~~~~~~~~~~~l~~~g~~------------------------- 283 (494)
.. -..+++.|+.+.+++....
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 00 0235677776666554310
Q ss_pred -----C---CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEec
Q psy14130 284 -----R---HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFL 350 (494)
Q Consensus 284 -----~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~ 350 (494)
. ..++.|..||+.+++..-.... ...+........+..+|+ ++.||.|+.||.++++.+.++.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v~~-g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE---KFAAWGGTLYTKGGLVWY-ATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecC---CCCccceeEEECCCEEEE-EcCCCeEEEEECCCCCEEEEEe
Confidence 0 1357899999987665333321 122222223334566644 7899999999999999865553
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.84 E-value=0.0028 Score=58.04 Aligned_cols=158 Identities=9% Similarity=-0.000 Sum_probs=100.6
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEE-ecC----CC--CceEEEEE---cCCCCEEEEEe----------
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTV-IDC----HP--DVINCLSF---NRDGSRLVTTC---------- 238 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~----h~--~~v~~l~~---~~~~~~l~s~~---------- 238 (494)
-.+++|++....++++.-..++|..||...+..... +.+ .. ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 357899886645555555899999999976643333 322 11 14679999 68888777544
Q ss_pred ---CCCeEEEEeCC---CCceEEEeee--c----------CCCCceEEEEECCCCeEEEEEecCCCC-ceEEEEeCCCCC
Q psy14130 239 ---KDKTVRVLDPR---TGLVISQGVC--H----------PGTRSSKAVFIGDTGRIVTTGFSRHSD-RQVGLWDENDLN 299 (494)
Q Consensus 239 ---~d~~v~iwd~~---~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~l~~~g~~~~~d-~~i~iwd~~~~~ 299 (494)
.+..|..||+. +++.+..... . .......++..+++ ..++++ +.. +.|...+....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~---s~~~~~I~rV~pdG~- 169 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAF---ALGMPAIARVSADGK- 169 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEE---EESSCEEEEECTTSC-
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeC---CCCCCeEEEEeCCCC-
Confidence 26889999999 7775544431 1 11125778888874 455544 244 66666665532
Q ss_pred CceeEee----ecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 300 TPLALET----VDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 300 ~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
....... .....+...++++|++..|++..+ +|.|..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 2111111 011234668899999999977766 99999999884
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.84 E-value=0.038 Score=58.14 Aligned_cols=220 Identities=10% Similarity=-0.034 Sum_probs=126.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec--CCCCceEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--CHPDVINCL 225 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~l 225 (494)
.+-|..|+..++.... + ...-......|.++...+++ . |..|+.++-+..+|..+++...... .....|.++
T Consensus 382 ~~Gl~~~~~~~~~~~~-~---~~~~~~~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 382 GGGINVFENGKRVAIY-N---KENRELLSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp SSCEEEEETTEEEEEC-C--------CCCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred CCcEEEEECCCCeEEE-c---cCCCCCCCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 3457888865431100 0 00001234679999988887 4 4446776779999987775433221 234679999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeec----CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 226 SFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCH----PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
...++|.+.+ |+. +-|..||..+++........ ....+..+...++ +.+.++. .++-|..||..+.. .
T Consensus 456 ~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt----~~~Gl~~~~~~~~~-~ 527 (781)
T 3v9f_A 456 YEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE-GRFWIGT----FGGGVGIYTPDMQL-V 527 (781)
T ss_dssp EECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT-CCEEEEE----SSSCEEEECTTCCE-E
T ss_pred EECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCC-CCEEEEE----cCCCEEEEeCCCCe-E
Confidence 9988886554 445 56889999877643322111 0122566665555 5565555 33447778876432 1
Q ss_pred eeEeeec--CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeecccee
Q psy14130 302 LALETVD--SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQCEIF 378 (494)
Q Consensus 302 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~~~~~ 378 (494)
....... ....|.++..+++|... ++. .+|.|..||..+++. ..+.. .-.....|.++...++|.+.++...-+
T Consensus 528 ~~~~~~~~l~~~~i~~i~~d~~g~lW-i~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl 604 (781)
T 3v9f_A 528 RKFNQYEGFCSNTINQIYRSSKGQMW-LAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWASTNTGI 604 (781)
T ss_dssp EEECTTTTCSCSCEEEEEECTTSCEE-EEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEECSSCE
T ss_pred EEccCCCCCCCCeeEEEEECCCCCEE-EEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEcCCce
Confidence 1111000 13467888888988866 433 466558888877653 22221 111234688888888888777764444
Q ss_pred EEEEee
Q psy14130 379 RFFKLH 384 (494)
Q Consensus 379 ~~~~l~ 384 (494)
..++..
T Consensus 605 ~~~~~~ 610 (781)
T 3v9f_A 605 SCYITS 610 (781)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 445443
No 284
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.84 E-value=0.031 Score=56.90 Aligned_cols=229 Identities=9% Similarity=-0.003 Sum_probs=140.5
Q ss_pred EEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCce
Q psy14130 143 FLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVI 222 (494)
Q Consensus 143 ~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v 222 (494)
+++...+.|+..++...... .....+. .-..+.+++|.+.++.++++-...+.|+.+++........+...-...
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~----~~~~~~~-~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFT----DIVLQLE-DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp EEEEESSCEEEEESSSTTCC----CEECCCS-CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEcccceEEEecCCCccc----eeEEecc-ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 44445556777777654321 1111111 224577899998654566666667899999987544333344334567
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCc
Q psy14130 223 NCLSFNRDGS-RLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTP 301 (494)
Q Consensus 223 ~~l~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~ 301 (494)
.++++++.+. +.++-+..+.|.+.++.... ...+....-.....++..|..+.++.+.+ .....|...++.....
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~--g~~~~I~r~~~dG~~~- 470 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDW--GEIPKIERAALDGSDR- 470 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCSC-
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecC--CCCCEEEEEccCCCcc-
Confidence 8999997554 55555567899999987543 33343333334789999998788888873 2246777777764322
Q ss_pred eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEE
Q psy14130 302 LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFF 381 (494)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 381 (494)
..+. ...-.....++++++++.||++-+..+.|..+++..... ..++.. ......+++...+ .+.++.-..-+|+
T Consensus 471 ~~l~-~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~--~l~~P~glav~~~-~ly~tD~~~~~I~ 545 (619)
T 3s94_A 471 VVLV-NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR-RVLVED--KIPHIFGFTLLGD-YVYWTDWQRRSIE 545 (619)
T ss_dssp EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEEEC--CCCSSCCEEEETT-EEEEECTTSSCEE
T ss_pred EEEE-eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCce-EEEecc--CCCCcEEEEEECC-EEEEeecCCCeEE
Confidence 2221 123356778999999999989888888899999865443 222221 1122356777655 5666654444455
Q ss_pred EeeC
Q psy14130 382 KLHT 385 (494)
Q Consensus 382 ~l~~ 385 (494)
.++.
T Consensus 546 ~~~k 549 (619)
T 3s94_A 546 RVHK 549 (619)
T ss_dssp EEES
T ss_pred EEEc
Confidence 5443
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.82 E-value=0.0064 Score=56.20 Aligned_cols=175 Identities=11% Similarity=0.206 Sum_probs=109.1
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCC----CCC--E-EEEEeC--CCeEEEEEC--CCCeEEEEecC-
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPT----AEN--V-VASAGF--DYLIILWDV--GKGEALTVIDC- 217 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~----~~~--~-l~s~s~--d~~v~iwd~--~~~~~~~~~~~- 217 (494)
.+.+||+ ++ +.++.+.. +.++.+..-|. |.. + +++.-. +.+|.++++ .++. +..+..
T Consensus 51 gL~Vydl-~G-------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 51 GLVVYSL-DG-------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp EEEEEET-TS-------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred CEEEEcC-CC-------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 4899999 56 44455543 45666666552 211 2 333333 578999976 3443 544421
Q ss_pred -----CC-CceEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceEEEeeecCCCCceEEEEECCCCeEEEE
Q psy14130 218 -----HP-DVINCLSF--NRD-GS-RLVTTCKDKTVRVLDPR-------TGLVISQGVCHPGTRSSKAVFIGDTGRIVTT 280 (494)
Q Consensus 218 -----h~-~~v~~l~~--~~~-~~-~l~s~~~d~~v~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (494)
.. ..+..+++ +|. +. +++...++|.+..|++. +.+.++++.... .+-.|+..+..+.|++.
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTEEEEE
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCeEEEe
Confidence 11 56777888 774 44 67888889999999883 234667766543 37888888887777777
Q ss_pred EecCCCCceEEEEeCCCC--CCceeEeeecCC---CceEEeEE--eCCCC-EEEEEEeCCCcEEEEEee
Q psy14130 281 GFSRHSDRQVGLWDENDL--NTPLALETVDSS---SGVLFPYY--DHDTR-ILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 281 g~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~---~~v~~~~~--~~~~~-~l~~~g~~dg~i~~wd~~ 341 (494)
- ++.-|..+|.+.. .....+...... ..+..+++ .++++ +|++++-+++++.+||.+
T Consensus 198 e----Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 E----EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp E----TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred c----ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 6 6666777775422 122223222211 34555555 56666 787777788999999997
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.81 E-value=0.0046 Score=64.76 Aligned_cols=184 Identities=8% Similarity=-0.043 Sum_probs=92.5
Q ss_pred cEEEEEcCCCCCCCCcccceEecc-cccccEEEEEEcCCCCCEEEEEe-C--CCeEEEEECCCC--eE-EEEe-cCCCCc
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLH-GHKRRVGYIEWHPTAENVVASAG-F--DYLIILWDVGKG--EA-LTVI-DCHPDV 221 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s-~--d~~v~iwd~~~~--~~-~~~~-~~h~~~ 221 (494)
+|.++++.++.. +....+. .+......+.|+|+|. .|+..+ . ...|.++|+.++ +. +..+ ....+.
T Consensus 248 ~v~~~~lgt~~~-----~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 248 KVWRHVMGKLQS-----EDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp EEEEEETTSCGG-----GCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred EEEEEECCCCch-----hcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 467777765521 1111211 2234467889999995 554443 2 346888999875 22 1333 334556
Q ss_pred eEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceEEE-eeecCCCCceEEEEECCCCeEEEEEecCCCCce--EEEEe
Q psy14130 222 INCLSFNRDGSRLVTTCKD----KTVRVLDPRTGLVISQ-GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQ--VGLWD 294 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~--i~iwd 294 (494)
..++.|+.++.+++.+..+ ..|..+|+.++..... +..+... ..-..+...++.++++. ..++. |.++|
T Consensus 322 ~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~-~~l~~~~~~~~~lv~~~---~~~g~~~l~~~d 397 (751)
T 2xe4_A 322 RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED-VFMESIAVRSNYLVVAG---RRAGLTRIWTMM 397 (751)
T ss_dssp CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS-EEEEEEEECSSEEEEEE---EETTEEEEEEEE
T ss_pred eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC-cEEEEEEEECCEEEEEE---EeCCEEEEEEEe
Confidence 6777766544444554443 3677778765322222 3333322 22222333456777776 45664 55666
Q ss_pred C-------CCCCCceeEeeecCCCceEEeEE----eCCCCEEEEEEeCC---CcEEEEEeeCCC
Q psy14130 295 E-------NDLNTPLALETVDSSSGVLFPYY----DHDTRILFLAGKGD---GNIRYYELTNER 344 (494)
Q Consensus 295 ~-------~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~l~~~g~~d---g~i~~wd~~~~~ 344 (494)
+ ........+ .++....+..+.+ ++++..++++.+.. ..+..+|+.+++
T Consensus 398 l~~~~~~~~~g~~~~~l-~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 398 ADSQDGVFKAGTGLREV-VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCTTTSCCCTTTCCEEC-CCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cccccccccCCccceEE-CCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 222101111 1222222333433 45666554554443 346667776665
No 287
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.81 E-value=0.024 Score=53.34 Aligned_cols=203 Identities=8% Similarity=-0.023 Sum_probs=111.3
Q ss_pred cccEEEEEEcCC---CCCEEEEEeC-------CCeEEEEECCCC----eEEE-EecC------CCCceEEEEEcCCCCEE
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGF-------DYLIILWDVGKG----EALT-VIDC------HPDVINCLSFNRDGSRL 234 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~-------d~~v~iwd~~~~----~~~~-~~~~------h~~~v~~l~~~~~~~~l 234 (494)
......|+|+|+ +..+.++-+. ...|..+++..+ .... .+.. .......|+|.|||.++
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Ly 144 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF 144 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEE
Confidence 446789999995 3245554332 235666666533 1111 1211 11223579999999766
Q ss_pred EEEeC-------------CCeEEEEeCCCCc------------eEEEe-eecCCCCceEEEEECCCCeEEEEEecCCCCc
Q psy14130 235 VTTCK-------------DKTVRVLDPRTGL------------VISQG-VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR 288 (494)
Q Consensus 235 ~s~~~-------------d~~v~iwd~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~ 288 (494)
++.+. .++|.-+|....- ....+ .++.. ...++|.+..+.|+++-. ..++
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn--p~gl~~d~~~g~l~~~d~--g~~~ 220 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN--PQGMAMNPWSNALWLNEH--GPRG 220 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE--EEEEEEETTTTEEEEEEE--CSBS
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC--ccceEEECCCCCEEEEec--CCCC
Confidence 66533 2467777765320 11111 23333 688999996678888763 1121
Q ss_pred eEEEEeCCCCCC----------------------------ceeEeeecCCCceEEeEEeC-------CCCEEEEEEeCCC
Q psy14130 289 QVGLWDENDLNT----------------------------PLALETVDSSSGVLFPYYDH-------DTRILFLAGKGDG 333 (494)
Q Consensus 289 ~i~iwd~~~~~~----------------------------~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~g~~dg 333 (494)
.=.|.-+..... ........++..+..+.|.. ++.++ ++.-..+
T Consensus 221 ~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~-v~~~~~~ 299 (353)
T 2g8s_A 221 GDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLF-IGALKDK 299 (353)
T ss_dssp CEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEE-EEETTTT
T ss_pred CcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEE-EEEccCC
Confidence 112222211100 00011122334566677754 34444 7776788
Q ss_pred cEEEEEeeCCCceEE--ecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 334 NIRYYELTNERPYIH--FLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 334 ~i~~wd~~~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
.|...++..++.... ++. .....+.++++.|||.+.++. ....+||++..
T Consensus 300 ~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 300 DVIVMSVNGDKVTEDGRILT--DRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEEEEEEETTEEEEEEEESG--GGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred EEEEEEeCCCeEeeeEEccc--CCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 898888886543211 221 123578999999999988864 46788998763
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.77 E-value=0.0048 Score=62.38 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=106.1
Q ss_pred EEEcCCCCCEEEEEeCC----------------CeEEEEECCCCeEEEEecCCC----------CceEEEEEc-CCC---
Q psy14130 182 IEWHPTAENVVASAGFD----------------YLIILWDVGKGEALTVIDCHP----------DVINCLSFN-RDG--- 231 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d----------------~~v~iwd~~~~~~~~~~~~h~----------~~v~~l~~~-~~~--- 231 (494)
+++.+.. .+++.++.+ +.|..+|..+|+.+..++... .++. +... .+|
T Consensus 246 ~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred eeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 4555665 466666554 489999999999988776421 1121 2222 467
Q ss_pred CEEEEEeCCCeEEEEeCCCCceEEEeeecC------------CC--------------------------CceEEEEECC
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHP------------GT--------------------------RSSKAVFIGD 273 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~------------~~--------------------------~~~~~~~~~~ 273 (494)
..++.++.+|.+.++|.++|+.+....... +. ....+++.|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 467788999999999999999876654221 00 0123556666
Q ss_pred CCeEEEEE---------------------------ec--CC------CCceEEEEeCCCCCCceeEeeecCCCceEEeEE
Q psy14130 274 TGRIVTTG---------------------------FS--RH------SDRQVGLWDENDLNTPLALETVDSSSGVLFPYY 318 (494)
Q Consensus 274 ~~~l~~~g---------------------------~~--~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 318 (494)
.+.+++.. +. .+ ..+.|.-||+.+++..-.... ......-..
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~ 480 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTM 480 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCE
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC---CCCccCcce
Confidence 55444321 00 01 347888899887654333221 111111112
Q ss_pred eCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCce
Q psy14130 319 DHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGC 370 (494)
Q Consensus 319 ~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 370 (494)
...+..+|+ |+.||.|+.||.++++.+.++... ......-+.+..+|..
T Consensus 481 ~tagg~vf~-gt~dg~l~A~D~~tG~~lW~~~l~--~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 481 ATAGDLVFY-GTLDGYLKARDSDTGDLLWKFKIP--SGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EETTTEEEE-ECTTSEEEEEETTTCCEEEEEECS--SCCCSCCEEEEETTEE
T ss_pred EecCCEEEE-ECCCCeEEEEECCCCCEEEEeeCC--CCcEeccEEEEeCCEE
Confidence 235666744 789999999999999987665221 1111223445556653
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.76 E-value=0.0021 Score=64.84 Aligned_cols=182 Identities=11% Similarity=-0.005 Sum_probs=109.5
Q ss_pred CCeEEEEECCCCeEEEEecCCCCc-------------------------------------e-EEEEEcCCCCEEEEEeC
Q psy14130 198 DYLIILWDVGKGEALTVIDCHPDV-------------------------------------I-NCLSFNRDGSRLVTTCK 239 (494)
Q Consensus 198 d~~v~iwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~~~~~~~l~s~~~ 239 (494)
++.|..+|..+|+.+.++...... + ..++++++...++.++.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 799999999999988876532111 0 23567776667766653
Q ss_pred C----------------CeEEEEeCCCCceEEEeeecCC--------CCceEEEEECCCC--eEEEEEecCCCCceEEEE
Q psy14130 240 D----------------KTVRVLDPRTGLVISQGVCHPG--------TRSSKAVFIGDTG--RIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 240 d----------------~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~l~~~g~~~~~d~~i~iw 293 (494)
+ +.|..+|.++|+.+-.+..... .....+....++. .+++.+ +.+|.+.++
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~---~~~G~l~~l 331 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHI---DRNGILYTL 331 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEE---CTTSEEEEE
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEe---CCCcEEEEE
Confidence 2 3699999999998777653211 0011111112432 466667 689999999
Q ss_pred eCCCCCCceeEeeec-----------CCCc--------------------------eEEeEEeCCCCEEEEEEe------
Q psy14130 294 DENDLNTPLALETVD-----------SSSG--------------------------VLFPYYDHDTRILFLAGK------ 330 (494)
Q Consensus 294 d~~~~~~~~~~~~~~-----------~~~~--------------------------v~~~~~~~~~~~l~~~g~------ 330 (494)
|..+++..-...... .... ...++|+|++..+|+...
T Consensus 332 D~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~ 411 (571)
T 2ad6_A 332 NRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDW 411 (571)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccc
Confidence 988765432221100 0000 124688999888877542
Q ss_pred ------------------------------CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEe-cCCceeee-cccee
Q psy14130 331 ------------------------------GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFM-PKRGCDVT-QCEIF 378 (494)
Q Consensus 331 ------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~-~~~~~ 378 (494)
.+|.|..||+.+++...+.-. ..++.+..+. .++.+++. .++.+
T Consensus 412 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~v~~g~~dg~l 487 (571)
T 2ad6_A 412 EPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE----KFAAWGGTLYTKGGLVWYATLDGYL 487 (571)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEE
T ss_pred cccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC----CCCccceeEEECCCEEEEEcCCCeE
Confidence 357899999999986544422 2223333333 23444443 47888
Q ss_pred EEEEeeCC
Q psy14130 379 RFFKLHTT 386 (494)
Q Consensus 379 ~~~~l~~~ 386 (494)
+.|+..++
T Consensus 488 ~a~D~~tG 495 (571)
T 2ad6_A 488 KALDNKDG 495 (571)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88887763
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.72 E-value=0.00037 Score=72.22 Aligned_cols=161 Identities=8% Similarity=-0.145 Sum_probs=101.8
Q ss_pred EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceEEE
Q psy14130 179 VGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCK-D-KTVRVLDPRTGLVISQ 256 (494)
Q Consensus 179 V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~ 256 (494)
...|++.+.+.+++++-...+.|.+.++........+.........|+++|.+.+|+.+.. . +.|..+++.... ...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeE
Confidence 4568888655466666666789999998755444333333355678999996555554443 2 678888775332 222
Q ss_pred eeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEEEEEeCCCcE
Q psy14130 257 GVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILFLAGKGDGNI 335 (494)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~g~~dg~i 335 (494)
+..........+++.+++++|+++- ...+.|..+|+..... ..+... ........+++. +..||++....+.|
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V 607 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 607 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCE
T ss_pred EEeCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeE
Confidence 2212222367899999888999888 6788999999875322 222111 111223445554 44677888788899
Q ss_pred EEEEeeCCCce
Q psy14130 336 RYYELTNERPY 346 (494)
Q Consensus 336 ~~wd~~~~~~~ 346 (494)
..++..+++..
T Consensus 608 ~~~d~~~G~~~ 618 (699)
T 1n7d_A 608 FSANRLTGSDV 618 (699)
T ss_dssp EEEETTTEEEE
T ss_pred EEEEccCCCce
Confidence 99998777653
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.027 Score=49.94 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=105.9
Q ss_pred EecCCCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 214 VIDCHPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 214 ~~~~h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.+.+-...+..++|+|++..|+ +...++.|...|+. ++.++.+........-.+++.++ +.++.+. -.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~-g~~~vs~---E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGD-NQFVISD---ERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECST-TEEEEEE---TTTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCC-CEEEEEE---CCCCcEEE
Confidence 4556667899999999766554 57788999999998 88888875433334678888877 5665555 46788999
Q ss_pred EeCCCCCCce--eEeee-----cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeC---CCceEEeccc-----ccCCC
Q psy14130 293 WDENDLNTPL--ALETV-----DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTN---ERPYIHFLNQ-----SLSGA 357 (494)
Q Consensus 293 wd~~~~~~~~--~~~~~-----~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~-----~~~~~ 357 (494)
+++....... ....+ ....+...++|+|.++.|+++. +.....+|.+.. ... .+.... .....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~~p~~i~~~~g~~~~~~-l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EKNPIEVYKVNGLLSSNE-LHISKDKALQRQFTLD 173 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ESSSEEEEEEESTTCSSC-CEEEECHHHHHTCCSS
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-CcCCceEEEEcccccCCc-eeeecchhhccccccC
Confidence 9876544311 11111 2234568899999998886755 444556666651 111 111110 01123
Q ss_pred CeeEEEEecC-CceeeeccceeEEEEeeC
Q psy14130 358 PQRGLGFMPK-RGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~-~~~~~~~~~~~~~~~l~~ 385 (494)
...++++.|. +.+++.+++.-++..++.
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 4789999995 456666777677777766
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.66 E-value=0.0096 Score=56.03 Aligned_cols=189 Identities=16% Similarity=0.088 Sum_probs=105.1
Q ss_pred cccEEEEEEcCC---CCCEEEEEeCC-----CeEEEEECCCCe-----EE-EEec---CCCCceEEEEEcCCCCEEEEEe
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGFD-----YLIILWDVGKGE-----AL-TVID---CHPDVINCLSFNRDGSRLVTTC 238 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~d-----~~v~iwd~~~~~-----~~-~~~~---~h~~~v~~l~~~~~~~~l~s~~ 238 (494)
......|+|+|+ +..+.++-+.. ..|..++...+. .+ ..+. +.......++|.|||.+.++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456789999998 43455554432 678888876431 11 2233 1112346899999998766643
Q ss_pred C-------------CCeEEEEeCCCC-------------ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc----
Q psy14130 239 K-------------DKTVRVLDPRTG-------------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR---- 288 (494)
Q Consensus 239 ~-------------d~~v~iwd~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~---- 288 (494)
. .++|.-+|.... ....-..++.. ...++|.++++.|+++-. ..++
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn--p~g~a~d~~~g~l~v~d~--g~~~~~~~ 229 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRN--PQGLAWHPKTGELFSSEH--GPSGEQGY 229 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSE--ECCCEECTTTCCEEEEEE--CC------
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCC--cccEEEECCCCCEEEEEc--CCCCCCCC
Confidence 2 256777776530 10111123332 577889996677777763 2222
Q ss_pred ---eEEEEeCCC---------------CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc-----
Q psy14130 289 ---QVGLWDEND---------------LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP----- 345 (494)
Q Consensus 289 ---~i~iwd~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~----- 345 (494)
.|.+..... ...+. ...........++| .++. +|++.-..+.|...++.....
T Consensus 230 ~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~--~~~~~~~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~ 305 (352)
T 2ism_A 230 GHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL--YFWPQGFPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVL 305 (352)
T ss_dssp CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS--EECTTCCCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEE
T ss_pred CCeEEEEeccCCcCCCCcccCCCCCCCCcCCe--EecCCCCCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeec
Confidence 344433211 00111 11223344556667 3554 447766777888888875542
Q ss_pred -eEEecccccCCCCeeEEEEecCCceeeecc
Q psy14130 346 -YIHFLNQSLSGAPQRGLGFMPKRGCDVTQC 375 (494)
Q Consensus 346 -~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 375 (494)
...++ .....++++++.|||.+.++.+
T Consensus 306 ~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 306 RVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred chheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 12222 1235689999999998887753
No 293
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.64 E-value=0.021 Score=53.34 Aligned_cols=170 Identities=14% Similarity=-0.007 Sum_probs=99.6
Q ss_pred CCCeEEEEECCCC--eE-EEEecC-----CCCceEEEEEcC--CCC-EEEEE-eC--CCeEEEEeCCCCc----eEEEee
Q psy14130 197 FDYLIILWDVGKG--EA-LTVIDC-----HPDVINCLSFNR--DGS-RLVTT-CK--DKTVRVLDPRTGL----VISQGV 258 (494)
Q Consensus 197 ~d~~v~iwd~~~~--~~-~~~~~~-----h~~~v~~l~~~~--~~~-~l~s~-~~--d~~v~iwd~~~~~----~~~~~~ 258 (494)
.+|.|.++|+.+. +. ...+.+ .......+.+.+ ++. +|+.+ .. +.+|.+|++..+. .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999999732 21 112332 224677788766 454 34444 33 5678887765432 334444
Q ss_pred ecCCCCceEEEEECCCCeEEEEEe---cC-----------CCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 259 CHPGTRSSKAVFIGDTGRIVTTGF---SR-----------HSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~g~---~~-----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
+..-...+.++..++ +.++++.. +. ...+.|.-+|.. .. .. ..+.-...+.++|+||++.
T Consensus 161 g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~~--~~~~l~~pNGia~spDg~~ 234 (355)
T 3sre_A 161 HKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-RV--VAEGFDFANGINISPDGKY 234 (355)
T ss_dssp CTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-EE--EEEEESSEEEEEECTTSSE
T ss_pred cCCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-EE--eecCCcccCcceECCCCCE
Confidence 444445788888888 56666651 00 113556666652 21 11 1223345678999999999
Q ss_pred EEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEec-CCceeee
Q psy14130 325 LFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMP-KRGCDVT 373 (494)
Q Consensus 325 l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~ 373 (494)
||++-+..+.|..|++.....+.. ...+.......++++.+ +|.+.++
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~-~~~~~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTP-LRVLSFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEE-EEEEECSSEEEEEEECTTTCCEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCcEec-CEEEeCCCCCceEEEeCCCCcEEEE
Confidence 999998999999999974321111 11112245567778877 4766553
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.62 E-value=0.12 Score=56.37 Aligned_cols=175 Identities=10% Similarity=0.111 Sum_probs=100.7
Q ss_pred eEEEEECCCCeEEEEecC-CCCceEEEE---EcCC-CCEEEEEe----------CCCeEEEEeCCCCceEEEee-ecCCC
Q psy14130 200 LIILWDVGKGEALTVIDC-HPDVINCLS---FNRD-GSRLVTTC----------KDKTVRVLDPRTGLVISQGV-CHPGT 263 (494)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~-h~~~v~~l~---~~~~-~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~-~~~~~ 263 (494)
.|++.|..+.+.+..++- ..+.+.+++ |..+ ..+|+.|+ ..|.|.+|++..++...... ...+.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 477788777776655442 234455555 3332 46888776 35789999987555322221 12343
Q ss_pred CceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 264 RSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 264 ~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
+.+++-.. ++++++- ...|++|++...+. +.... .....+..+.....++++ +.|..-..|.++..+..
T Consensus 888 -v~al~~~~--g~Lla~i-----g~~l~vy~l~~~~~-L~~~~-~~~~~i~~~~l~~~~~~I-~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 888 -VYSMVEFN--GKLLASI-----NSTVRLYEWTTEKE-LRTEC-NHYNNIMALYLKTKGDFI-LVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp -EEEEEEET--TEEEEEE-----TTEEEEEEECTTSC-EEEEE-EECCCSCEEEEEEETTEE-EEEESSBCEEEEEEETT
T ss_pred -CEEEeeeC--CEEEEEc-----CCEEEEEECCCCce-EEEEe-eccccEEEEEEeccCCEE-EEEEhhheEEEEEEEcC
Confidence 66666543 5666654 68999999975432 22111 111122222333356777 77777777888777655
Q ss_pred CceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEeeC
Q psy14130 344 RPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLHT 385 (494)
Q Consensus 344 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~~ 385 (494)
......+..-.....++++.|.-+..++++. .+.+.+++...
T Consensus 957 ~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 957 EGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp TTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred CCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 4334444444445678899998776655543 55566555543
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.58 E-value=0.0064 Score=61.45 Aligned_cols=168 Identities=11% Similarity=0.114 Sum_probs=100.5
Q ss_pred CeEEEEECCCCeEEEEecC--CC--------CceEEEEEc-CCCC---EEEEEeCCCeEEEEeCCCCceEEEeeecCC--
Q psy14130 199 YLIILWDVGKGEALTVIDC--HP--------DVINCLSFN-RDGS---RLVTTCKDKTVRVLDPRTGLVISQGVCHPG-- 262 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~--h~--------~~v~~l~~~-~~~~---~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-- 262 (494)
+.|..+|+.+|+.+..++. |. .++. +... .+|+ .++.++.+|.+.++|.++|+.+........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999888753 32 1221 1222 4674 788899999999999999998766544320
Q ss_pred ----------C--------------------------------CceEEEEECCCCeEEEEEec-----------------
Q psy14130 263 ----------T--------------------------------RSSKAVFIGDTGRIVTTGFS----------------- 283 (494)
Q Consensus 263 ----------~--------------------------------~~~~~~~~~~~~~l~~~g~~----------------- 283 (494)
. ....+++.|+.+.+++....
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0 00123455555555543310
Q ss_pred ------------CCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecc
Q psy14130 284 ------------RHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 284 ------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
...++.|.-||+.+++..-.... ...+........+..+ ..|+.||.++.||.++++.+.++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglv-f~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecC---CCCCcccceEeCCCEE-EEECCCCcEEEEECCCCCEEEEecC
Confidence 01368899999988765333322 1122211122245666 4588999999999999998765533
Q ss_pred cccCCCCeeEEEEecCCceeee
Q psy14130 352 QSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 352 ~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
. ......-+.+..+|...+.
T Consensus 526 ~--~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 G--SGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp S--SCCCSCCEEEEETTEEEEE
T ss_pred C--CCcccCceEEEECCEEEEE
Confidence 2 1111122566677764443
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.54 E-value=0.042 Score=51.60 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=112.8
Q ss_pred cccEEEEEEcCC---CCCEEEEEeC---C----CeEEEEECCCC-------eEE-EEecC-CCCceEEEEEcCCCCEEEE
Q psy14130 176 KRRVGYIEWHPT---AENVVASAGF---D----YLIILWDVGKG-------EAL-TVIDC-HPDVINCLSFNRDGSRLVT 236 (494)
Q Consensus 176 ~~~V~~~~~~p~---~~~~l~s~s~---d----~~v~iwd~~~~-------~~~-~~~~~-h~~~v~~l~~~~~~~~l~s 236 (494)
......|+++|+ +..+.++-+. + ..|..++.... +.+ ..+.. .......|+|.|||.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356789999997 4245554442 3 56777887644 111 11221 1123467999999987776
Q ss_pred EeC-------------CCeEEEEeCCCC--------ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 237 TCK-------------DKTVRVLDPRTG--------LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 237 ~~~-------------d~~v~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
.+. .++|.-+|.... ....-..++.. ...++|.++.+.++++-.....-..|.+...
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn--p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN--PQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC--CCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC--cceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 432 256666666432 11111223433 5789999966788877621111123444332
Q ss_pred CC---------------CCCceeEeee-cCCCceEEeEE-------eCCCCEEEEEEeCCCcEEEEEeeCCCceE---Ee
Q psy14130 296 ND---------------LNTPLALETV-DSSSGVLFPYY-------DHDTRILFLAGKGDGNIRYYELTNERPYI---HF 349 (494)
Q Consensus 296 ~~---------------~~~~~~~~~~-~~~~~v~~~~~-------~~~~~~l~~~g~~dg~i~~wd~~~~~~~~---~~ 349 (494)
.. ...+. ... ........++| ..++.++ ++.-..+.|...++....... .+
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~--~~~~~~~~ap~G~~~y~g~~fp~~~G~l~-v~~~~~~~v~~~~~~~~g~~~~~~~~ 306 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPV--IDTGSETWAPSGASFVHGDMFPGLRGWLL-IACLRGSMLAAVNFGDNMEVRKISTF 306 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCS--EECTTCCCCEEEEEECCSSSCGGGTTEEE-EEETTTTEEEEEEECGGGCEEEEEEE
T ss_pred CCcCCCCcccCCCCCCCCcCCE--eecCCCCcCCcceEEECCCCCcccCCcEE-EEEcCCCEEEEEEECCCCcccceeee
Confidence 11 00111 111 12345666777 3456444 776677889888887532221 22
Q ss_pred cccccCCCCeeEEEEecCCceeeecc-cee---------EEEEeeC
Q psy14130 350 LNQSLSGAPQRGLGFMPKRGCDVTQC-EIF---------RFFKLHT 385 (494)
Q Consensus 350 ~~~~~~~~~v~~~~~~p~~~~~~~~~-~~~---------~~~~l~~ 385 (494)
+.. ....+.++++.|||.+.++.+ ... +||++..
T Consensus 307 ~~~--~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 307 FKN--VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp CTT--TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred ccC--CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 221 135689999999998887764 233 7887764
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.53 E-value=0.078 Score=51.80 Aligned_cols=235 Identities=10% Similarity=0.041 Sum_probs=128.5
Q ss_pred CcEEEEEEc--CcEEEEEcCCCCCCCCcccceEec-ccccccEEEEEE-------cCCCCCEEEEEeCCC------eEEE
Q psy14130 140 GGAFLVLPI--HRVKLWYIPDGGLSGNLNEWIMDL-HGHKRRVGYIEW-------HPTAENVVASAGFDY------LIIL 203 (494)
Q Consensus 140 ~g~~~~~~~--~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~-------~p~~~~~l~s~s~d~------~v~i 203 (494)
++.+.++.. +.|++.|..++.+. .+... .+.......++| ++++..++++...++ .|.+
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~-----~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~ 225 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLS-----SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYI 225 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEE-----EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCCCEEE-----EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEE
Confidence 344554443 35777787765221 11111 112235789999 999843444444331 3667
Q ss_pred EECCC-CeEE-----EEecCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCC-------CCce-----------EEEe-
Q psy14130 204 WDVGK-GEAL-----TVIDCHPDVINCLSFNR-DGSRLVTTCKDKTVRVLDPR-------TGLV-----------ISQG- 257 (494)
Q Consensus 204 wd~~~-~~~~-----~~~~~h~~~v~~l~~~~-~~~~l~s~~~d~~v~iwd~~-------~~~~-----------~~~~- 257 (494)
.+... +... ..+... .....++.+| ++.++++-..++.|..+|+. ++.. ...+
T Consensus 226 i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~ 304 (496)
T 3kya_A 226 IKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF 304 (496)
T ss_dssp EECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE
T ss_pred EecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE
Confidence 76443 1211 122211 2345778999 45566666678899999997 5543 1222
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----ceeEeee-cC------------CCceE-EeEEe
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----PLALETV-DS------------SSGVL-FPYYD 319 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----~~~~~~~-~~------------~~~v~-~~~~~ 319 (494)
..........++++|+++.++.+- .....|+.+|...... +..+... .. -.... .++.+
T Consensus 305 ~~~~~~~p~~ia~~p~G~~lYvaD---~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd 381 (496)
T 3kya_A 305 TIADPSWEFQIFIHPTGKYAYFGV---INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVK 381 (496)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEE---TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEE
T ss_pred ecCCCCCceEEEEcCCCCEEEEEe---CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEc
Confidence 222222357899999977677777 6788999976532111 1122111 00 01233 34444
Q ss_pred C------CCCEEEEEEeCCCcEEEEEeeCCCceEEecccc-------------c--------CCCCeeEEEEecC-Ccee
Q psy14130 320 H------DTRILFLAGKGDGNIRYYELTNERPYIHFLNQS-------------L--------SGAPQRGLGFMPK-RGCD 371 (494)
Q Consensus 320 ~------~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~-------------~--------~~~~v~~~~~~p~-~~~~ 371 (494)
. ....||++-.....|+.++ .++. +..+...- . .-....+|++.++ +.+.
T Consensus 382 ~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly 459 (496)
T 3kya_A 382 NPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp CTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred cccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence 1 2335558877888899998 4553 23332210 0 0134678999996 8888
Q ss_pred eec--cceeEEEEeeC
Q psy14130 372 VTQ--CEIFRFFKLHT 385 (494)
Q Consensus 372 ~~~--~~~~~~~~l~~ 385 (494)
++. ...+|.+.+..
T Consensus 460 VaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 460 VHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEETTTTEEEEEEECC
T ss_pred EEeCCCCEEEEEECCC
Confidence 875 44555555544
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.53 E-value=0.011 Score=59.72 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=92.8
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCC----CceEE-EEEcCCCCEEEEEe------CCCeEEEEeCCCCceEEEeeec
Q psy14130 192 VASAGFDYLIILWDVGKGEALTVIDCHP----DVINC-LSFNRDGSRLVTTC------KDKTVRVLDPRTGLVISQGVCH 260 (494)
Q Consensus 192 l~s~s~d~~v~iwd~~~~~~~~~~~~h~----~~v~~-l~~~~~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~ 260 (494)
++.++.|+.|.-+|..+|+.+....... ..+.+ -... ++ .++.++ .++.|+.+|.++|+.+-++...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7778889999999999999887765322 12221 1111 44 455554 3899999999999988766533
Q ss_pred CCC-------------------------------------CceEEEEECCCCeEEEEEecCCCC----------------
Q psy14130 261 PGT-------------------------------------RSSKAVFIGDTGRIVTTGFSRHSD---------------- 287 (494)
Q Consensus 261 ~~~-------------------------------------~~~~~~~~~~~~~l~~~g~~~~~d---------------- 287 (494)
... .....++.+..+.++... .+
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~----g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT----GNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC----CCCSCSCGGGSCSCCTTS
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC----CCCccccCcccCCCcccc
Confidence 211 001344556645444432 22
Q ss_pred ceEEEEeCCCCCCceeEeeecCC-------CceEEeEEe-CCCC--EEEEEEeCCCcEEEEEeeCCCceEEe
Q psy14130 288 RQVGLWDENDLNTPLALETVDSS-------SGVLFPYYD-HDTR--ILFLAGKGDGNIRYYELTNERPYIHF 349 (494)
Q Consensus 288 ~~i~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~-~~~~--~l~~~g~~dg~i~~wd~~~~~~~~~~ 349 (494)
..|.-+|.++++..-..+...+. .....+... .+|+ .+++.++.+|.++++|.++++.+...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 47889999887654444332221 111112222 5674 34477889999999999999876543
No 299
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.067 Score=56.27 Aligned_cols=185 Identities=10% Similarity=-0.058 Sum_probs=111.2
Q ss_pred cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe---cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14130 176 KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI---DCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGL 252 (494)
Q Consensus 176 ~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~ 252 (494)
...|.++...++| + |..|+.++-|..+|..++...... ......|.++...++|.+.+ |+.++-|..+|..+++
T Consensus 362 ~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 362 NKVVSSVCDDGQG-K-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSCEEEEEECTTS-C-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred CcceEEEEEcCCC-C-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 3569999998887 3 555665667889998654322111 12346799999988887554 6666779999988776
Q ss_pred eEEEeee--cCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeec----CCCceEEeEEeCCCCEEE
Q psy14130 253 VISQGVC--HPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVD----SSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 253 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~ 326 (494)
.. .+.. .....+.++...++ +.+.++. . +-|..||..+.... ...... ....+.++..+++|...
T Consensus 439 ~~-~~~~~~~~~~~v~~i~~d~~-g~lwigt----~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lW- 509 (781)
T 3v9f_A 439 FQ-IIELEKNELLDVRVFYEDKN-KKIWIGT----H-AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSEGRFW- 509 (781)
T ss_dssp EE-ECCSTTTCCCCEEEEEECTT-SEEEEEE----T-TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTTCCEE-
T ss_pred EE-EeccCCCCCCeEEEEEECCC-CCEEEEE----C-CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCCCCEE-
Confidence 33 2221 11222555555444 5666555 3 56888997764321 111111 13568888899988876
Q ss_pred EEEeCCCcEEEEEeeCCCceEEecc-cccCCCCeeEEEEecCCceeeec
Q psy14130 327 LAGKGDGNIRYYELTNERPYIHFLN-QSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 327 ~~g~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
++ +.++-|..||..+++. ..+.. .-.....|.++...++|.+.++.
T Consensus 510 ig-t~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 510 IG-TFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp EE-ESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred EE-EcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 43 3434477788766542 22221 11123568888888887766554
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.45 E-value=0.032 Score=51.08 Aligned_cols=159 Identities=11% Similarity=0.097 Sum_probs=101.0
Q ss_pred cEEEEEE---cCCCCCEEEEEe-------------CCCeEEEEECC---CCeEEEEec--C-----------CCCceEEE
Q psy14130 178 RVGYIEW---HPTAENVVASAG-------------FDYLIILWDVG---KGEALTVID--C-----------HPDVINCL 225 (494)
Q Consensus 178 ~V~~~~~---~p~~~~~l~s~s-------------~d~~v~iwd~~---~~~~~~~~~--~-----------h~~~v~~l 225 (494)
.+..|.| .|.+ .++++.. .+..|..+|+. +++.+.... . -......+
T Consensus 64 ~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 4579999 6886 5776543 26789999998 777655443 1 11358899
Q ss_pred EEcCCCCEEEEEeCC-CeEEEEeCCCCceEEEee-----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC
Q psy14130 226 SFNRDGSRLVTTCKD-KTVRVLDPRTGLVISQGV-----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN 299 (494)
Q Consensus 226 ~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~ 299 (494)
+..++|+..++++.- +.|...+..... +..+. .....-...+++.|++..|++.. + .+.+..+|+....
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~-~g~L~~fD~~~pv 217 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---G-PRALTAFDVSKPY 217 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---S-SSSEEEEECSSSS
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEc---C-CCeEEEEcCCCCc
Confidence 999999999999988 888888877443 33222 11111256899999977777776 4 9999999988532
Q ss_pred C-ceeEeeec---CCCceEE-eEEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 300 T-PLALETVD---SSSGVLF-PYYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 300 ~-~~~~~~~~---~~~~v~~-~~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
. +....... ....... +.-..+|+.|+++.+..+.+.+.+...
T Consensus 218 ~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 218 AWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 2 11111001 1112222 233457888767777776655555444
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.42 E-value=0.14 Score=52.12 Aligned_cols=200 Identities=14% Similarity=0.043 Sum_probs=128.6
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC------CCCceEEEEEcCCCCEEE-EEeCCCeEEEEeCC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC------HPDVINCLSFNRDGSRLV-TTCKDKTVRVLDPR 249 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~l~-s~~~d~~v~iwd~~ 249 (494)
..+.+++|.+..+.++.+=...+.|+.+++........+.. ....+.++++.+.++.|+ +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 55789999997645555555678899998864433333322 234688999999766554 55567899999986
Q ss_pred CCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc-eEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEE
Q psy14130 250 TGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR-QVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLA 328 (494)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 328 (494)
|+....+.......+..++..|..+.++.+.. .... .|...++..... ..+.. ..-.....++++++++.||.+
T Consensus 420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~--g~~~~~I~r~~~dG~~~-~~l~~-~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNL--QERSPKIERAALDGTER-EVLFF-SGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp -SCEEEEEEECTTCCEEEEEEETTTTEEEEEEE--ETTEEEEEEEETTSCSC-EEEEC-SSCSCEEEEEEETTTTEEEEE
T ss_pred -CCeEEEEEeCCCCceeeEEEecCCCeEEEeec--CCCCCeEEEEeCCCCCc-EEEEe-ccCCCccEEEEeCCCCEEEEE
Confidence 55454544333334889999997788888873 1222 677777764322 22221 223467889999999999888
Q ss_pred EeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 329 GKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 329 g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
-+..+.|...++..... ..+... ......+++... +.+.++.-..-+|+.++.
T Consensus 495 D~~~~~I~~~~~dG~~r-~~~~~~--~~~~P~glav~~-~~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 495 DSDLRRIESSDLSGANR-IVLEDS--NILQPVGLTVFE-NWLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp ETTTTEEEEEETTSCSC-EEEECS--SCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred eCCCCEEEEEeCCCCce-EEEEcC--CCCCcEEEEEEC-CEEEEEECCCCeEEEEEC
Confidence 87788999999865442 333321 123457888766 566666544445555544
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.40 E-value=0.011 Score=54.59 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=92.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECC----CCe--EEEEEecCCC--CceEEEEeCCCCCCc
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGD----TGR--IVTTGFSRHS--DRQVGLWDENDLNTP 301 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--l~~~g~~~~~--d~~i~iwd~~~~~~~ 301 (494)
..++++...+.+-+.+||+ +|+.++.+.. +. ...+..-|. +.. ++++.- .. +++|.+|++.....+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~-~nnVD~r~~~~l~g~~~dla~as~--R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GK-LNNVDIRYDFPLNGKKVDIAAASN--RSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SC-EEEEEEEEEEEETTEEEEEEEEEE--CSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CC-cccEEEecccccCCceEeEEEEeC--CCCCCCeEEEEEECCCCCc
Confidence 4567888888899999999 7998888754 22 555554442 111 333331 34 688999977421222
Q ss_pred eeEe-e----ecCC-CceEEeEE--eCC-CC-EEEEEEeCCCcEEEEEeeC---CCceEEecccccCCCCeeEEEEecCC
Q psy14130 302 LALE-T----VDSS-SGVLFPYY--DHD-TR-ILFLAGKGDGNIRYYELTN---ERPYIHFLNQSLSGAPQRGLGFMPKR 368 (494)
Q Consensus 302 ~~~~-~----~~~~-~~v~~~~~--~~~-~~-~l~~~g~~dg~i~~wd~~~---~~~~~~~~~~~~~~~~v~~~~~~p~~ 368 (494)
+... . .... ..+..+++ +|. ++ ++ .....+|.+..|++.. ++...+.+..+..+..+.+++..+..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ya-fV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYA-MVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEE-EEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEE-EEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC
Confidence 2211 1 0011 34444555 775 44 45 4555779999999943 33334455556667789999999877
Q ss_pred ceeeeccceeEEEEeeC
Q psy14130 369 GCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 369 ~~~~~~~~~~~~~~l~~ 385 (494)
..+..+.+..-||.+..
T Consensus 192 g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp TEEEEEETTTEEEEEEC
T ss_pred CeEEEecccceEEEEeC
Confidence 76666655567999884
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.32 E-value=0.063 Score=49.77 Aligned_cols=192 Identities=13% Similarity=0.088 Sum_probs=104.3
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEE-EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC--CCCce
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEAL-TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP--RTGLV 253 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~--~~~~~ 253 (494)
..+..+.+.+++ .+++.+ .++.|.. ....|+.- .....+...+.++.+.+++.+++.+...+..+-.|- .+.+.
T Consensus 122 ~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 122 GSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp SCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE
T ss_pred CCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE
Confidence 446778777665 456555 4554422 22223322 222345668999999999988877755554555553 22222
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--ecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET--VDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
+. .... ..+..+.+.++ +.+++++ .+|.+++.+...+..-..... +.....+..+.+.+++..+ ++| .
T Consensus 199 ~~--~~~~-~~~~~~~~~~~-g~~~~~~----~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~-~~g-~ 268 (327)
T 2xbg_A 199 HN--RTTS-RRLHNMGFTPD-GRLWMIV----NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW-LAG-G 268 (327)
T ss_dssp EE--CCSS-SCEEEEEECTT-SCEEEEE----TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE-EEE-S
T ss_pred CC--CCCC-CccceeEECCC-CCEEEEe----CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE-EEe-C
Confidence 21 1222 23677777776 5777777 678877764221110000000 1122357788888877655 555 5
Q ss_pred CCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec-cceeEEEEee
Q psy14130 332 DGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ-CEIFRFFKLH 384 (494)
Q Consensus 332 dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~-~~~~~~~~l~ 384 (494)
+|.| ++....++..............+.++.|.+++.+++.+ ++ .+++.+
T Consensus 269 ~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G--~i~~~~ 319 (327)
T 2xbg_A 269 AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKG--ILLRYV 319 (327)
T ss_dssp TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTT--EEEEEC
T ss_pred CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCc--eEEEEc
Confidence 7766 45555565533322111123467889998776666554 44 445443
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.28 E-value=0.019 Score=58.02 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=83.3
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCC-------------Cce--------------------------------EEE
Q psy14130 191 VVASAGFDYLIILWDVGKGEALTVIDCHP-------------DVI--------------------------------NCL 225 (494)
Q Consensus 191 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-------------~~v--------------------------------~~l 225 (494)
+++.++.+|.++++|..+|+.+..+.... .++ ..+
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 417 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPM 417 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCC
T ss_pred EEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCc
Confidence 78889999999999999999887654321 000 134
Q ss_pred EEcCCCCEEEEEe---------------------------------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEEC
Q psy14130 226 SFNRDGSRLVTTC---------------------------------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG 272 (494)
Q Consensus 226 ~~~~~~~~l~s~~---------------------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (494)
+++|+..+++... .++.|..||+.+++.+-+....... .... ...
T Consensus 418 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~-~~g~-~~t 495 (582)
T 1flg_A 418 AYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL-WAGV-LAT 495 (582)
T ss_dssp EECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC-CSCC-EEE
T ss_pred eECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC-cccc-eEe
Confidence 6676555554432 2688999999999988776654322 1111 122
Q ss_pred CCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 273 DTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 273 ~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.++.+ ..| +.|+.++.||.++++..-.... .......-+.|..+|+.++++.++
T Consensus 496 agglv-f~g---~~dg~l~A~D~~tG~~lW~~~~-~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 496 AGNLV-FTG---TGDGYFKAFDAKSGKELWKFQT-GSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTTEE-EEE---CTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCEE-EEE---CCCCcEEEEECCCCCEEEEecC-CCCcccCceEEEECCEEEEEEEcc
Confidence 33444 446 6899999999998776444332 211111225666788766455443
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.18 E-value=0.13 Score=46.88 Aligned_cols=182 Identities=14% Similarity=0.106 Sum_probs=88.9
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCeEEEE--ecCCCCc
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD----YLIILWDVGKGEALTV--IDCHPDV 221 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d----~~v~iwd~~~~~~~~~--~~~h~~~ 221 (494)
.+.+.+||..+..-. .+..+......-.++.+ ++ .+++.|+.+ ..+.++|+.+.+-... +......
T Consensus 23 ~~~~~~~d~~~~~W~-----~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 94 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWT-----DIRCPFEKRRDAACVFW--DN-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS 94 (306)
T ss_dssp TTSEEEEETTTTEEE-----ECCCCSCCCBSCEEEEE--TT-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS
T ss_pred CceEEEecCCCCCEe-----cCCCCCcccceeEEEEE--CC-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc
Confidence 356888988776211 11111111111122222 33 577777755 5788999988753322 2211111
Q ss_pred eEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE-ecCCC-----Cce
Q psy14130 222 INCLSFNRDGSRLVTTCKD------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRHS-----DRQ 289 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~-----d~~ 289 (494)
...+.+ ++++++.|+.+ ..+.+||+.+.+-...-..........++.. + +.+++.| +.... -..
T Consensus 95 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 95 LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-N-GLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEECCEESCTTTCEECCC
T ss_pred eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-C-CEEEEECCCCCCCCcccccce
Confidence 222222 67777777765 4689999998763322111111111223333 3 5666665 21111 356
Q ss_pred EEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 290 VGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 290 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
+.+||+.+..-. ..........-..++.. ++ .|++.|+.+ ..+.+||+.+.+
T Consensus 171 ~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 171 CEVYDPATETWT-ELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEEEETTTTEEE-EECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EEEeCCCCCeEE-ECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 889998764321 11111111111112222 44 455777654 358889988765
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.16 E-value=0.14 Score=46.61 Aligned_cols=147 Identities=13% Similarity=0.195 Sum_probs=74.5
Q ss_pred CEEEEEeCC-----CeEEEEECCCCe---EEE--EecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceE
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGE---ALT--VIDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVI 254 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~---~~~--~~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 254 (494)
.+++.|+.+ ..+.++|+.+.+ -.. .+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 577777755 468899988765 222 22211111222222 56777777643 46899999887633
Q ss_pred EEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCCC-ceEEeEEeCCCCEEEEEEeC
Q psy14130 255 SQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSSS-GVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~g~~ 331 (494)
..-..........++.. + +.+++.| +... .-..+.+||+.+..-. ......... ....+.+ + ..|++.|+.
T Consensus 142 ~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~-~~i~v~GG~ 215 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVA-S-GVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMATKRSGAGVALL--N-DHIYVVGGF 215 (301)
T ss_dssp EEEECSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--T-TEEEEECCB
T ss_pred ECCCCCCCcccceEEEE-C-CEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCcccccceEEEE--C-CEEEEEeCC
Confidence 22221121111223333 3 5676666 1100 1256889998764321 111111111 1112222 3 455577766
Q ss_pred C-----CcEEEEEeeCCC
Q psy14130 332 D-----GNIRYYELTNER 344 (494)
Q Consensus 332 d-----g~i~~wd~~~~~ 344 (494)
+ ..+.+||+.+.+
T Consensus 216 ~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCc
Confidence 4 468899998765
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.83 E-value=0.32 Score=45.46 Aligned_cols=150 Identities=13% Similarity=0.045 Sum_probs=81.4
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec---CCCCceEEEEEcCC---CCEEEEEeC-C-----CeE
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID---CHPDVINCLSFNRD---GSRLVTTCK-D-----KTV 243 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~-d-----~~v 243 (494)
.-..++|.|+| .++++ ..++.|++++ .++. +..+. ........|+|+|+ +..|+.+.. . ..|
T Consensus 32 ~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 35789999998 55555 5669999998 4442 22221 22457899999998 555544433 2 678
Q ss_pred EEEeCCCCc-----eE-EEeee--cCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCC--------
Q psy14130 244 RVLDPRTGL-----VI-SQGVC--HPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDL-------- 298 (494)
Q Consensus 244 ~iwd~~~~~-----~~-~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~-------- 298 (494)
..++...+. .+ ..+.. ........++|.|++..+++.|... ...+.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888877542 11 11321 1111246889999864344434100 01256666665430
Q ss_pred ----CCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC
Q psy14130 299 ----NTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG 333 (494)
Q Consensus 299 ----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg 333 (494)
... .+... .......++|+|++..|+++-....
T Consensus 188 ~~~~~~~-~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 188 GRRGARP-EVYSL-GHRNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp TCTTSCT-TEEEE-CCSEECCCEECTTTCCEEEEEECC-
T ss_pred CCCCCCc-cEEEE-cCCCcccEEEECCCCCEEEEEcCCC
Confidence 011 11111 2344667899994444546544433
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.81 E-value=0.24 Score=45.28 Aligned_cols=148 Identities=10% Similarity=0.071 Sum_probs=73.0
Q ss_pred CEEEEEeC----C-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce
Q psy14130 190 NVVASAGF----D-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLV 253 (494)
Q Consensus 190 ~~l~s~s~----d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~ 253 (494)
.+++.|+. + ..+.++|+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 57777765 2 3688899987753221 1111111222223 56677776643 4688999988763
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
...-.......-..++.. + +.+++.| +... ....+.+||+.+..-. ..........-..++.. + ..|++.|+.
T Consensus 150 ~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~-~~iyv~GG~ 224 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAVL-N-RLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL-H-NCIYAAGGY 224 (308)
T ss_dssp EECCCCSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-T-TEEEEECCB
T ss_pred eECCCCCccccceEEEEE-C-CEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE-C-CEEEEEeCC
Confidence 322111111111223333 3 5666666 1110 1256889998753221 11111111111112222 3 455577766
Q ss_pred C-----CcEEEEEeeCCC
Q psy14130 332 D-----GNIRYYELTNER 344 (494)
Q Consensus 332 d-----g~i~~wd~~~~~ 344 (494)
+ ..+.+||+.+.+
T Consensus 225 ~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETET 242 (308)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCCccceEEEEeCCCCc
Confidence 4 458899988765
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.67 E-value=0.16 Score=46.08 Aligned_cols=181 Identities=12% Similarity=0.081 Sum_probs=87.2
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCC-----CeEEEEECCCCeEEE--EecCCCCc
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFD-----YLIILWDVGKGEALT--VIDCHPDV 221 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----~~v~iwd~~~~~~~~--~~~~h~~~ 221 (494)
+.+.+||..+.... .. ..+..+......-.++.. ++ .+++.|+.+ ..+.++|+.+.+-.. .+......
T Consensus 78 ~~~~~~d~~~~~~~-~W-~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 152 (301)
T 2vpj_A 78 SSVECLDYTADEDG-VW-YSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG 152 (301)
T ss_dssp CCEEEEETTCCTTC-CC-EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS
T ss_pred ceEEEEECCCCCCC-ee-EECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc
Confidence 45889998776400 00 111111111111122222 34 577777654 368899998775332 22211111
Q ss_pred eEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCC-----CceEE
Q psy14130 222 INCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS-----DRQVG 291 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----d~~i~ 291 (494)
-..+.+ ++++++.|+.+ ..+.+||+.+.+-...-..........++.. + +.+++.| +. ...+.
T Consensus 153 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~i~v~G---G~~~~~~~~~v~ 225 (301)
T 2vpj_A 153 AGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-N-DHIYVVG---GFDGTAHLSSVE 225 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEEC---CBCSSSBCCCEE
T ss_pred ceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-C-CEEEEEe---CCCCCcccceEE
Confidence 122222 67777777654 4689999988763322111111111223333 3 5677766 33 35789
Q ss_pred EEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 292 LWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 292 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
+||+.+..-. .+........-..++. .+++ |++.|+.+ ..|.+||..+.+
T Consensus 226 ~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 226 AYNIRTDSWT-TVTSMTTPRCYVGATV-LRGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEETTTTEEE-EECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEeCCCCcEE-ECCCCCCcccceeEEE-ECCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 9998764321 1111111111111222 2444 55777655 346778877654
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.66 E-value=0.28 Score=45.70 Aligned_cols=179 Identities=9% Similarity=-0.002 Sum_probs=101.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEeccc-----ccccEEEEEEcC--CCCCEEEEE-eC--CCeEEEEECCCC--e--EEEE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHG-----HKRRVGYIEWHP--TAENVVASA-GF--DYLIILWDVGKG--E--ALTV 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~p--~~~~~l~s~-s~--d~~v~iwd~~~~--~--~~~~ 214 (494)
+.|.++|..+.... . +.+ .+.+ ..-....+.+.+ ++...|+.+ .. +.+|.+|++..+ . .+..
T Consensus 83 G~I~~~d~~~~~~~--~-~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 83 GKILLMDLNEKEPA--V-SEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CEEEEEETTSSSCC--E-EEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEE
T ss_pred CeEEEEecCCCCCc--e-EEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEec
Confidence 46888887643211 0 111 1222 233556677655 342234444 33 467888876543 2 2334
Q ss_pred ecCC-CCceEEEEEcCCCCEEEEEeC-----------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCe
Q psy14130 215 IDCH-PDVINCLSFNRDGSRLVTTCK-----------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGR 276 (494)
Q Consensus 215 ~~~h-~~~v~~l~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (494)
+.+. -...+.+.+.++|++.++... .+.|.-+|.. +.......- .. .+.++|+|++..
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l-~~-pNGia~spDg~~ 234 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGF-DF-ANGINISPDGKY 234 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEE-SS-EEEEEECTTSSE
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCC-cc-cCcceECCCCCE
Confidence 4432 245789999999998877641 2456666653 322222222 22 689999999888
Q ss_pred EEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeC-CCCEEEEEEeCC-CcEEEEE
Q psy14130 277 IVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDH-DTRILFLAGKGD-GNIRYYE 339 (494)
Q Consensus 277 l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~g~~d-g~i~~wd 339 (494)
++++- +..+.|..||+...........+......-.+++++ +|+.. +++..+ +.|..|+
T Consensus 235 lYvad---t~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lw-va~~~~g~~v~~~~ 295 (355)
T 3sre_A 235 VYIAE---LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLW-VGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEEE---GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEE-EEEESCHHHHHSCC
T ss_pred EEEEe---CCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEE-EEecCCceEEEEEC
Confidence 88887 678999999986432222222222334566788888 58776 544322 3444443
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.57 E-value=0.18 Score=46.87 Aligned_cols=158 Identities=14% Similarity=0.089 Sum_probs=86.5
Q ss_pred EEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE--EEee---ecCCCCceEEEEECC---CCeEEEEEecC
Q psy14130 213 TVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI--SQGV---CHPGTRSSKAVFIGD---TGRIVTTGFSR 284 (494)
Q Consensus 213 ~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~---~~~~~~~~~~~~~~~---~~~l~~~g~~~ 284 (494)
..+...-.....|+|.|+|+++++--..|+|++++...++.. ..+. .........++++|+ ++.++++ |+.
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~-yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY-FTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE-EEC
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE-Eec
Confidence 334444567789999999997776655899999987766532 1111 111222678999985 4555553 332
Q ss_pred CCCceEEEEeCCCCC-------Cce-eEeeec--CCCceEEeEEeCCCCEEEEEEe------------CCCcEEEEEeeC
Q psy14130 285 HSDRQVGLWDENDLN-------TPL-ALETVD--SSSGVLFPYYDHDTRILFLAGK------------GDGNIRYYELTN 342 (494)
Q Consensus 285 ~~d~~i~iwd~~~~~-------~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~g~------------~dg~i~~wd~~~ 342 (494)
..+..|.-|.+.... ... .+..+. .......+.|.|||.+++.+|. .-|.|.-.+...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 345566666654311 111 111221 1223456899999976633342 134554444432
Q ss_pred C----Cce---EEecccccCCCCeeEEEEecCCceeeec
Q psy14130 343 E----RPY---IHFLNQSLSGAPQRGLGFMPKRGCDVTQ 374 (494)
Q Consensus 343 ~----~~~---~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 374 (494)
. .++ ..+...+ ....+++|.|++.+.++.
T Consensus 184 ~ip~~nPf~~~~i~a~G~---RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGH---RNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SBCTTCSSTTCCEEEBCC---SBCCEEEECTTCCEEEEE
T ss_pred CccCCCCCCCCeEEeeCC---CCcceEEECCCCCEEEEe
Confidence 2 000 0111111 235689999988776664
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.55 E-value=0.45 Score=43.48 Aligned_cols=183 Identities=11% Similarity=0.063 Sum_probs=87.1
Q ss_pred EEEEcCcEEEEEcCCCCCCCCcccce-EecccccccEEEEEEcCCCCCEEEEEeC-----C------CeEEEEECCCCeE
Q psy14130 144 LVLPIHRVKLWYIPDGGLSGNLNEWI-MDLHGHKRRVGYIEWHPTAENVVASAGF-----D------YLIILWDVGKGEA 211 (494)
Q Consensus 144 ~~~~~~~v~iw~~~~~~~~~~~~~~~-~~~~~h~~~V~~~~~~p~~~~~l~s~s~-----d------~~v~iwd~~~~~~ 211 (494)
++.+.+.+.+||..++. .. ..+..............++ .+++.|+. . ..+.++|+.+.+-
T Consensus 8 ~~~GG~~~~~yd~~~~~-------W~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 8 FMISEEGAVAYDPAANE-------CYCASLSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEETTEEEEEETTTTE-------EEEEECCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEcCCceEEECCCCCe-------EecCCCCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 33344578889988762 21 1222111222222233344 67777773 1 1377889887753
Q ss_pred EEEecCCCCc-e-EEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 212 LTVIDCHPDV-I-NCLSFNRDGSRLVTTCKD--------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 212 ~~~~~~h~~~-v-~~l~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
.. +.....+ . .+++.. ++.+++.|+.+ ..+.+||+.+.+-...-.......-..++. -+ +.+++.|
T Consensus 80 ~~-~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~-~~iyv~G 155 (315)
T 4asc_A 80 LG-MPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HM-DLVYVIG 155 (315)
T ss_dssp EE-CCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ET-TEEEEEC
T ss_pred EE-CCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-EC-CEEEEEe
Confidence 22 2111111 0 112222 56666776632 458999998876322111111111122333 23 5666666
Q ss_pred ecCCC------CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCC-----cEEEEEeeCCC
Q psy14130 282 FSRHS------DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDG-----NIRYYELTNER 344 (494)
Q Consensus 282 ~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg-----~i~~wd~~~~~ 344 (494)
+. -..+.+||+.+..-. ..........-..++. -++ .|++.|+.++ .+.+||+.+.+
T Consensus 156 ---G~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 156 ---GKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATV-HDG-RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ---CBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ---CCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEE-ECC-EEEEEeccCCCCccceEEEEECCCCe
Confidence 22 246889998764211 1111111111111111 244 4557777654 47888887765
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.52 E-value=0.31 Score=44.37 Aligned_cols=134 Identities=11% Similarity=0.146 Sum_probs=93.9
Q ss_pred CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEE
Q psy14130 199 YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIV 278 (494)
Q Consensus 199 ~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 278 (494)
..|.|.|+..+..+..-.- .--+.-.+|..+.||--. ..+++++|+++.+.+........ +.-..|..+ ..|.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~--VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC--EEEEEECSS-SEEE
T ss_pred CEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCc--cEEEEecCC-CeEE
Confidence 4788889987654322211 112445688888777665 68999999999988887776543 778888887 5565
Q ss_pred EEEecCCCCceEEEEeCCCCCCceeEeeec---CCCceEEeEEeCCCCEEEEEEe------CCCcEEEEEeeCCC
Q psy14130 279 TTGFSRHSDRQVGLWDENDLNTPLALETVD---SSSGVLFPYYDHDTRILFLAGK------GDGNIRYYELTNER 344 (494)
Q Consensus 279 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~g~------~dg~i~~wd~~~~~ 344 (494)
.+. +..|+-|++.....|....... ....|..-..+++.++++++|- -.|.+.+|..+.+.
T Consensus 122 lVT-----~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~ 191 (365)
T 2xzh_A 122 LVT-----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 191 (365)
T ss_dssp EEE-----SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE
T ss_pred EEc-----CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc
Confidence 555 7889999998756665544321 2356778888999999988764 34678888887654
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.38 E-value=0.2 Score=45.68 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=73.2
Q ss_pred CEEEEEeCC------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCc
Q psy14130 190 NVVASAGFD------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCK---------DKTVRVLDPRTGL 252 (494)
Q Consensus 190 ~~l~s~s~d------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~---------d~~v~iwd~~~~~ 252 (494)
.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++++++.|+. -..+.+||+.+.+
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 577777765 4688999988763322 1111111122222 5666666653 3458899998876
Q ss_pred eEEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCCCceeEeeecCC-CceEEeEEeCCCCEEEEEE
Q psy14130 253 VISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLNTPLALETVDSS-SGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~g 329 (494)
-...-..........++.. + +++++.| ++.. .-..+.+||+.+..-. .+...... .....+.+ + ..|++.|
T Consensus 181 W~~~~~~p~~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~-~~i~v~G 254 (306)
T 3ii7_A 181 WTELCPMIEARKNHGLVFV-K-DKIFAVGGQNGLGGLDNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV--G-SIVYVLA 254 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE-T-TEEEEECCEETTEEBCCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE--T-TEEEEEE
T ss_pred EEECCCccchhhcceEEEE-C-CEEEEEeCCCCCCCCceEEEeeCCCCcEE-ECCCCCCCccceeEEEE--C-CEEEEEe
Confidence 3222111111112233333 3 5676665 1100 1246889998763211 11111111 11122222 3 4455777
Q ss_pred eCC-----CcEEEEEeeCCC
Q psy14130 330 KGD-----GNIRYYELTNER 344 (494)
Q Consensus 330 ~~d-----g~i~~wd~~~~~ 344 (494)
+.+ ..+.+||..+.+
T Consensus 255 G~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 255 GFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CBCSSSBCCEEEEEETTTTE
T ss_pred CcCCCeeeeeEEEEcCCCCe
Confidence 754 457888887764
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.38 E-value=0.55 Score=42.55 Aligned_cols=145 Identities=14% Similarity=0.206 Sum_probs=72.9
Q ss_pred CEEEEEeCCC-----eEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFDY-----LIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-------KTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d~-----~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 5777777553 578899887753322 2111111122222 56666666542 458899998876332
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEEecCCC-----CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTGFSRHS-----DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
.-..........++.. + +.+++.| +. ...+.+||+.+..-. .+........-..++. .++ .|++.|+
T Consensus 188 ~~~~p~~r~~~~~~~~-~-~~iyv~G---G~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~-~~~-~i~v~GG 259 (302)
T 2xn4_A 188 IAEMSTRRSGAGVGVL-N-NLLYAVG---GHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCA-VNG-LLYVVGG 259 (302)
T ss_dssp ECCCSSCCBSCEEEEE-T-TEEEEEC---CBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEECC
T ss_pred CCCCccccccccEEEE-C-CEEEEEC---CCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeEEE-ECC-EEEEECC
Confidence 2111111111223333 3 5677766 33 246889998764321 1111111111111112 244 4557776
Q ss_pred CCC-----cEEEEEeeCCC
Q psy14130 331 GDG-----NIRYYELTNER 344 (494)
Q Consensus 331 ~dg-----~i~~wd~~~~~ 344 (494)
.++ .+.+||..+.+
T Consensus 260 ~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 260 DDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BCSSSBCCCEEEEETTTTE
T ss_pred cCCCcccccEEEEcCCCCe
Confidence 553 48889988765
No 316
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.35 E-value=0.63 Score=42.89 Aligned_cols=155 Identities=10% Similarity=0.061 Sum_probs=87.2
Q ss_pred ccccccEEEEEEcCCCCCEEEEEeCCCeEEEEEC--CCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 173 HGHKRRVGYIEWHPTAENVVASAGFDYLIILWDV--GKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 173 ~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.++...+..+.+.+++ .+++.+...+..+-+|- .+-+.+. ......+..+.+.+++..++ ++.+|.+++.+...
T Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN 234 (327)
T ss_dssp CSCCCCEEEEEECTTS-CEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTE
T ss_pred cCCCcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCC
Confidence 3455678999999987 57766654444444453 2223332 23556789999999887654 55678887764333
Q ss_pred CceEEEeeec---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee-cCCCceEEeEEeCCCCEEE
Q psy14130 251 GLVISQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV-DSSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 251 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 326 (494)
++.-..+... ....+..+.+.++ +.++++| .++.|. +....+..-...... .....+..+.|.+++. +
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g----~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~- 306 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAG----GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-G- 306 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEE----STTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-E-
T ss_pred CCeeEeccCCcccCCcceEEEEecCC-CEEEEEe----CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-e-
Confidence 4332222211 1122567777765 6788888 567663 333333221111111 1234567787875544 4
Q ss_pred EEEeCCCcEEEEE
Q psy14130 327 LAGKGDGNIRYYE 339 (494)
Q Consensus 327 ~~g~~dg~i~~wd 339 (494)
++++.+|.|.-++
T Consensus 307 ~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 307 FILGQKGILLRYV 319 (327)
T ss_dssp EEECSTTEEEEEC
T ss_pred EEEcCCceEEEEc
Confidence 3445788776655
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.33 E-value=0.69 Score=43.22 Aligned_cols=148 Identities=9% Similarity=-0.060 Sum_probs=79.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe-EEEEec---CCCCceEEEEEcCC---CCEEEEEeC----C----Ce
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGE-ALTVID---CHPDVINCLSFNRD---GSRLVTTCK----D----KT 242 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~----d----~~ 242 (494)
....|+|.|+| .+++ +..++.|+++|. .++ .+..+. ........|+++|+ +..|+.+.. + ..
T Consensus 30 ~P~~ia~~pdG-~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGG-RYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETT-EEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCC-eEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45789999998 4544 556699999974 454 222221 22356899999997 444444332 3 57
Q ss_pred EEEEeCCCC--c-----eE-EEeeecCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCCC---C--
Q psy14130 243 VRVLDPRTG--L-----VI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDLN---T-- 300 (494)
Q Consensus 243 v~iwd~~~~--~-----~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~~---~-- 300 (494)
|..|+...+ . .+ ..+..........++|.|++..+++.|-.. ...+.|.-++....- .
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 778887654 1 11 122211111246789999864444444100 012456666654310 0
Q ss_pred -ceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 301 -PLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 301 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
...+... .......++|+|+...|+++-
T Consensus 187 ~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 187 PNSPIWSY-GHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTCCEEEE-CCSCCCEEEECTTTCCEEEEE
T ss_pred CCCcEEEE-ccCCcceEEEeCCCCCEEEEe
Confidence 0112222 234456789999444454654
No 318
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.15 E-value=0.75 Score=41.89 Aligned_cols=185 Identities=12% Similarity=0.147 Sum_probs=114.3
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC----CCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH----PDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h----~~~v~~ 224 (494)
.+.|+|+++. ..+....- ...|.-=.|-.. +.|+-.+ +..|+-|++.. ..+...+..| ...|..
T Consensus 88 ~LQiFnletK-------~klks~~~-~e~VvfWkWis~--~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIIn 156 (365)
T 2xzh_A 88 TLQIFNIEMK-------SKMKAHTM-TDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIIN 156 (365)
T ss_dssp EEEEEETTTT-------EEEEEEEC-SSCEEEEEECSS--SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEE
T ss_pred eEEEechHHh-------hhhcceec-CCccEEEEecCC--CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEE
Confidence 6999999988 44444442 346666677655 3455544 46899999974 3566667655 356777
Q ss_pred EEEcCCCCEEEEEeC-------CCeEEEEeCCCCceEEEeeecCCCCceEEEE--ECCCCeEEEEEecCCCCceEEEEeC
Q psy14130 225 LSFNRDGSRLVTTCK-------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVF--IGDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 225 l~~~~~~~~l~s~~~-------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
-..+++.++++..+- .|.+.+|..+.+ ..+.+.+|... ...+.. .+....+++.+......+.++|-++
T Consensus 157 Y~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi 234 (365)
T 2xzh_A 157 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 234 (365)
T ss_dssp EEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEE-EEEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred EEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeee-eEEEecCCCCCCceEEEEEEecCCCcEEEEEEc
Confidence 888888887665442 377899998744 46677777532 111111 1122346665521122368999998
Q ss_pred CCC---CCceeEee----ec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEE
Q psy14130 296 NDL---NTPLALET----VD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIH 348 (494)
Q Consensus 296 ~~~---~~~~~~~~----~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~ 348 (494)
... ..+..... .. ...-..++..++.-..+|+.. .-|.|++||+.++.++..
T Consensus 235 ~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT-K~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 235 GTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT-KYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp SSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE-TTSEEEEEETTTCCEEEE
T ss_pred CCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe-CCcEEEEEEcccCcEEEE
Confidence 543 22221111 11 123356678888878886654 789999999999987533
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.09 E-value=0.78 Score=41.52 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=74.0
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceEEEe
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKDK-----TVRVLDPRTGLVISQG 257 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~ 257 (494)
.+++.|+.+ ..+.++|+.+.+-... +.........+.+ ++.+++.|+.++ .+.+||+.+.+-...-
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 577777754 3588999987753322 2211111222222 567777777553 5889999887633221
Q ss_pred eecCCCCceEEEEECCCCeEEEEE-ecCCC---CceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTG-FSRHS---DRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD- 332 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d- 332 (494)
..........++.. + +.+++.| +.... -..+.+||+.+..-. ..........-.+++. .+ ..|++.|+.+
T Consensus 141 ~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~ 215 (302)
T 2xn4_A 141 PMNTRRSSVGVGVV-G-GLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMSTRRSGAGVGV-LN-NLLYAVGGHDG 215 (302)
T ss_dssp CCSSCCBSCEEEEE-T-TEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ET-TEEEEECCBSS
T ss_pred CCCCcccCceEEEE-C-CEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCccccccccEEE-EC-CEEEEECCCCC
Confidence 11111111223333 3 5666665 21111 345889998764321 1111111111111222 13 4555777654
Q ss_pred ----CcEEEEEeeCCC
Q psy14130 333 ----GNIRYYELTNER 344 (494)
Q Consensus 333 ----g~i~~wd~~~~~ 344 (494)
..+.+||+.+.+
T Consensus 216 ~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNA 231 (302)
T ss_dssp SSBCCCEEEEETTTTE
T ss_pred CcccceEEEEeCCCCC
Confidence 368899988765
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.08 E-value=0.97 Score=42.83 Aligned_cols=157 Identities=13% Similarity=0.100 Sum_probs=89.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEeeec---CCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCC-Cc----
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTGLVISQGVCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLN-TP---- 301 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~-~~---- 301 (494)
+|..++.+- ++.||.-++.....-+.+... .-..+..+..+|++ .+++.- .+.+|.|-.+.... ..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~----g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLF----NDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEE----CSSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEe----cCCeEEEEEecCccccCcccc
Confidence 444444443 467777777644433333332 12137788889985 555554 48899999987321 11
Q ss_pred ----ee--Eeeec-----CCCceEEeEEeCCC---CEEEEEEeCCCcEEEEEeeCC--CceEEeccc----cc---CCCC
Q psy14130 302 ----LA--LETVD-----SSSGVLFPYYDHDT---RILFLAGKGDGNIRYYELTNE--RPYIHFLNQ----SL---SGAP 358 (494)
Q Consensus 302 ----~~--~~~~~-----~~~~v~~~~~~~~~---~~l~~~g~~dg~i~~wd~~~~--~~~~~~~~~----~~---~~~~ 358 (494)
.. ...++ ...+|..+.|+|-+ ..| ++-..|+.|++||+... +|. .+.. +. ....
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L-VVLtsD~~Ir~yDl~~s~~~P~--~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI-VVLKEDDTITMFDILNSQEKPI--VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE-EEEETTSCEEEEETTCTTSCCE--EESCCCSEEESCSSCCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE-EEEecCCEEEEEEcccCCCCCc--chhccccccCCCcccce
Confidence 11 11221 24679999999964 456 67779999999999863 232 1211 10 1156
Q ss_pred eeEEEEecCCceeee--ccceeEEEEeeCCCCeEEEeEEEeeC
Q psy14130 359 QRGLGFMPKRGCDVT--QCEIFRFFKLHTTRNMCEPISMIVPR 399 (494)
Q Consensus 359 v~~~~~~p~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~pr 399 (494)
|.+++|.+++..+-. ..+...+|.+-. +-|-...+|+
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAlcP----~LP~~~~~~~ 220 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAFYP----FLPSVLLLNE 220 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEESS----CCCSEEECCH
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEECC----CCccccccCH
Confidence 888999987654333 334445555543 3333444444
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.01 E-value=1.1 Score=42.56 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=121.0
Q ss_pred CcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC----CCceE
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH----PDVIN 223 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h----~~~v~ 223 (494)
..+.|+|+++. ..+....-. ..|.-=.|-.. +.|+-.+ +..|+-|++.. ..++..+..| ...|.
T Consensus 86 ~~lQiFnle~K-------~klks~~~~-e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QII 154 (494)
T 1bpo_A 86 KTLQIFNIEMK-------SKMKAHTMT-DDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (494)
T ss_dssp TEEEEEETTTT-------EEEEEEECS-SCCCEEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred CeEEEEchHHh-------hhhcceecC-CCceEEEecCC--CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEE
Confidence 37999999987 444444433 34555556444 3455554 46899999964 3566677655 35677
Q ss_pred EEEEcCCCCEEEEEe-------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEe
Q psy14130 224 CLSFNRDGSRLVTTC-------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWD 294 (494)
Q Consensus 224 ~l~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd 294 (494)
.-..+++.++++..+ -.|.+.+|..+.+ ..+.+.+|... ...+... +....+++.+......+.++|-+
T Consensus 155 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEE-EEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeee-eEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 888888999776443 2478899998754 46677787543 2222111 11124666663222347899999
Q ss_pred CCCC---CCceeEeee----c---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEE
Q psy14130 295 ENDL---NTPLALETV----D---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGF 364 (494)
Q Consensus 295 ~~~~---~~~~~~~~~----~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 364 (494)
+... ..+...... . ...-..++..++.-..+|+.. .-|.|++||+.++.++..- .. +..+|-..+-
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT-K~G~i~lyDleTgt~i~~n--rI-s~~~iF~t~~ 308 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT-KYGYIHLYDLETGTCIYMN--RI-SGETIFVTAP 308 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE-TTSEEEEEETTTCCEEEEE--EC-CSSCEEEEEE
T ss_pred cCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe-cCceEEEEecccceeeeee--cc-cCCceEEecc
Confidence 8543 112211111 1 123356678888888886654 7899999999999875432 22 2445544444
Q ss_pred ec
Q psy14130 365 MP 366 (494)
Q Consensus 365 ~p 366 (494)
..
T Consensus 309 ~~ 310 (494)
T 1bpo_A 309 HE 310 (494)
T ss_dssp ET
T ss_pred cC
Confidence 33
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.95 E-value=0.71 Score=44.80 Aligned_cols=111 Identities=15% Similarity=0.105 Sum_probs=61.9
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceE--EEeee-----cCCCCceEEEEECC---CCeEEEEEecC----
Q psy14130 219 PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVI--SQGVC-----HPGTRSSKAVFIGD---TGRIVTTGFSR---- 284 (494)
Q Consensus 219 ~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~~-----~~~~~~~~~~~~~~---~~~l~~~g~~~---- 284 (494)
-....+|+|.|+|+++++-...+.|++++..+++.. ..+.. ........++++|+ ++.++++-...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346679999999997776544457999987666532 22211 01112568999986 57776664100
Q ss_pred -CC----CceEEEEeCCCCCC----c-eeEeeec--CCCceEEeEEeCCCCEEEEEE
Q psy14130 285 -HS----DRQVGLWDENDLNT----P-LALETVD--SSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 285 -~~----d~~i~iwd~~~~~~----~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~g 329 (494)
.. ...|.-|+...... . ..+..+. .......++|.|||.+++.+|
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 00 23555565432211 1 1111121 123467899999998664444
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.86 E-value=1.3 Score=48.58 Aligned_cols=183 Identities=12% Similarity=0.148 Sum_probs=108.9
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCC-CeEEEEecCC----CCceEE
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGK-GEALTVIDCH----PDVINC 224 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h----~~~v~~ 224 (494)
++.|+|+.+. ..+....- ...|.-=.|-... .|+-.+ +..|.-|++.. ..++..+..| ...|..
T Consensus 87 ~lQiFnl~~k-------~klks~~~-~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIin 155 (1630)
T 1xi4_A 87 TLQIFNIEMK-------SKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIIN 155 (1630)
T ss_pred eEEEeehHHh-------hhhccccc-CCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEE
Confidence 7999999887 33333332 2345555665442 344443 45799999964 3455555544 456777
Q ss_pred EEEcCCCCEEEEEe-------CCCeEEEEeCCCCceEEEeeecCCCCceEEEEE--CCCCeEEEEEecCCCCceEEEEeC
Q psy14130 225 LSFNRDGSRLVTTC-------KDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFI--GDTGRIVTTGFSRHSDRQVGLWDE 295 (494)
Q Consensus 225 l~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~d~~i~iwd~ 295 (494)
-.-+++.++++..+ -.|.+.+|..+.+ ..+.+.+|... ....... +....+++.+......+.++|-++
T Consensus 156 Y~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~-F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei 233 (1630)
T 1xi4_A 156 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 233 (1630)
T ss_pred eeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhh-hheeccCCCCCCceEEEEEEecCCCceEEEEec
Confidence 78888888776443 3588999988754 35566777654 3222221 222356665522223478999998
Q ss_pred CCC---CCceeEee----ec---CCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCce
Q psy14130 296 NDL---NTPLALET----VD---SSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPY 346 (494)
Q Consensus 296 ~~~---~~~~~~~~----~~---~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~ 346 (494)
... ..+..... +. ...-..++..++.-..+|+. +.-|.|++||+.++.++
T Consensus 234 ~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i-tk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 234 GTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI-TKYGYIHLYDLETGTCI 293 (1630)
T ss_pred CCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEE-ecCceEEEEecccchhh
Confidence 543 11111110 01 11224556777777777555 47899999999999864
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.75 E-value=1.2 Score=40.75 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=83.7
Q ss_pred CcEEEEEcCCCCCCCCcccceE-ecccccccEEEEEEcCCCCCEEEEEeC----CC-------eEEEEECCCCeEEEE--
Q psy14130 149 HRVKLWYIPDGGLSGNLNEWIM-DLHGHKRRVGYIEWHPTAENVVASAGF----DY-------LIILWDVGKGEALTV-- 214 (494)
Q Consensus 149 ~~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~p~~~~~l~s~s~----d~-------~v~iwd~~~~~~~~~-- 214 (494)
..+..||..+.. ... .+..............++ .+++.|+. ++ .+.++|+.+.+-...
T Consensus 24 ~~~~~yd~~~~~-------W~~~~~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 24 TAAVAYDPMENE-------CYLTALAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp SEEEEEETTTTE-------EEEEEECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred cceEEECCCCCc-------eecccCCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 357888887762 211 111111111222223444 68888873 12 277889887653321
Q ss_pred ecCCCCceEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-
Q psy14130 215 IDCHPDVINCLSFNRDGSRLVTTCKD-------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH- 285 (494)
Q Consensus 215 ~~~h~~~v~~l~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~- 285 (494)
+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-...-.......-..++. .+ +.+++.| +...
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~ 171 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HN-GMIYCLGGKTDDK 171 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ET-TEEEEECCEESSS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-EC-CEEEEEcCCCCCC
Confidence 1111111122222 56777777754 358899998876332211111110112222 23 5666665 2110
Q ss_pred -CCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC-----CcEEEEEeeCCC
Q psy14130 286 -SDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD-----GNIRYYELTNER 344 (494)
Q Consensus 286 -~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d-----g~i~~wd~~~~~ 344 (494)
.-..+.+||+.+..-. ..........-..++. -++ .|++.|+.+ ..+.+||+.+.+
T Consensus 172 ~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWK-DLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CccceEEEEcCCCCEEE-ECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 1246899998764321 1111111111111222 244 555777644 346788887765
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.45 E-value=1.8 Score=40.99 Aligned_cols=144 Identities=11% Similarity=0.048 Sum_probs=90.3
Q ss_pred cCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc----cccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCe---
Q psy14130 138 AGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH----KRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGE--- 210 (494)
Q Consensus 138 ~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~--- 210 (494)
..|..+.+...+.||.-++.... ..+.+.-. -..|..+..+|+| .+||..+ +..|.|-.+..+.
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~-------~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDS-------LYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNV 100 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCS-------SCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCC
T ss_pred cCCCEEEEEECCEEEEEECCCCC-------cceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccC
Confidence 56667777778889988887542 12222211 2256789999999 6888776 5688998886221
Q ss_pred ---------EEEEecC------CCCceEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCc--eEEEeeecC--------C
Q psy14130 211 ---------ALTVIDC------HPDVINCLSFNR---DGSRLVTTCKDKTVRVLDPRTGL--VISQGVCHP--------G 262 (494)
Q Consensus 211 ---------~~~~~~~------h~~~v~~l~~~~---~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~--------~ 262 (494)
....+.- ...+|..+.|+| .+..|++-..|+.||+||+.... +. .+.... .
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV 179 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc
Confidence 1223321 257799999999 46799999999999999998633 22 222110 0
Q ss_pred CCceEEEEECCCCeEEEEEecCCCCceEEEE
Q psy14130 263 TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLW 293 (494)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iw 293 (494)
..+.+++|.+++=.|++..- +.+|.|+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~--t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNT--TEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEEC--TTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEec--CCCCCEEEE
Confidence 23667777775333333220 355666543
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.44 E-value=1.1 Score=40.58 Aligned_cols=145 Identities=11% Similarity=0.088 Sum_probs=72.3
Q ss_pred CEEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceEEEe
Q psy14130 190 NVVASAGFD-----YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKD-----KTVRVLDPRTGLVISQG 257 (494)
Q Consensus 190 ~~l~s~s~d-----~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 257 (494)
.+++.|+.+ ..+.++|+.+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||+.+.+-...-
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC
Confidence 577776643 3688899987753321 1111111122223 56777777654 46899999877632221
Q ss_pred eecCCCCceEEEEECCCCeEEEEEecCCCC-----ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCC
Q psy14130 258 VCHPGTRSSKAVFIGDTGRIVTTGFSRHSD-----RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGD 332 (494)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~d 332 (494)
..........++.. + +.+++.| +.+ ..+.+||+.+..-. .+........-..++. -++ .|++.|+.+
T Consensus 201 ~~p~~r~~~~~~~~-~-~~iyv~G---G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~ 272 (308)
T 1zgk_A 201 AMNTIRSGAGVCVL-H-NCIYAAG---GYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITV-HQG-RIYVLGGYD 272 (308)
T ss_dssp CCSSCCBSCEEEEE-T-TEEEEEC---CBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEECCBC
T ss_pred CCCCccccceEEEE-C-CEEEEEe---CCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEE-ECC-EEEEEcCcC
Confidence 11111111233333 3 5677766 332 56899998764221 1111111111111222 134 455777654
Q ss_pred -----CcEEEEEeeCCC
Q psy14130 333 -----GNIRYYELTNER 344 (494)
Q Consensus 333 -----g~i~~wd~~~~~ 344 (494)
..+.+||+.+.+
T Consensus 273 ~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 273 GHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSCBCCEEEEEETTTTE
T ss_pred CCcccceEEEEcCCCCE
Confidence 347788877654
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.31 E-value=2.3 Score=41.22 Aligned_cols=164 Identities=10% Similarity=0.035 Sum_probs=88.0
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEecC------CCCceEEEEEcCC---CCEEEEEe-C------
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVIDC------HPDVINCLSFNRD---GSRLVTTC-K------ 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~------h~~~v~~l~~~~~---~~~l~s~~-~------ 239 (494)
...+|+|.|+| +++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|..+. .
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45799999998 5777654445788888755543 223321 2456789999995 44444433 2
Q ss_pred ------CCeEEEEeCCCC--c-----eEE-EeeecCCCCceEEEEECCCCeEEEEEecCC--------------------
Q psy14130 240 ------DKTVRVLDPRTG--L-----VIS-QGVCHPGTRSSKAVFIGDTGRIVTTGFSRH-------------------- 285 (494)
Q Consensus 240 ------d~~v~iwd~~~~--~-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------------------- 285 (494)
...|.-|+...+ + .+. .+..........++|.+++..++++|-...
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~ 186 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQE 186 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHH
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccccccccccc
Confidence 234555554332 1 121 122211122678999999665566551100
Q ss_pred --------CCceEEEEeCCCCCCc----------eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 286 --------SDRQVGLWDENDLNTP----------LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 286 --------~d~~i~iwd~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..|.|.-.+... ..+ ..+... .......++|+|++.+.++--+.++.-.|.-+..+.
T Consensus 187 ~~aq~~~~~~G~IlRi~~dG-~ip~~Npf~~~~~~ei~a~-G~RNp~gla~dp~G~L~~~d~g~~~~dein~i~~G~ 261 (454)
T 1cru_A 187 LNGKDYHTYMGKVLRLNLDG-SIPKDNPSFNGVVSHIYTL-GHRNPQGLAFTPNGKLLQSEQGPNSDDEINLIVKGG 261 (454)
T ss_dssp HHTTCCTTCSSEEEEECTTS-CCCTTCCEETTEECSEEEB-CCSEEEEEEECTTSCEEEEEECSSSCEEEEECCTTC
T ss_pred ccccCCCCCCeeEEEEeCCC-CCCCCCCCCCCCcceEEEE-CCCCcceEEECCCCCEEEEecCCCCCeEEEEecCCC
Confidence 023444444432 210 112222 335577889999877664444455555555555543
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.93 E-value=2.7 Score=40.00 Aligned_cols=200 Identities=10% Similarity=0.077 Sum_probs=119.2
Q ss_pred cCCCeeee-CCceEEEEEeecCCcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccc----cccEEEEEEcCCCCCEEE
Q psy14130 119 HDSHFCAA-NPKFVAVVTEVAGGGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGH----KRRVGYIEWHPTAENVVA 193 (494)
Q Consensus 119 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~ 193 (494)
.++.+..| +++.+++++. ..|.-|++.... .|.+.+.-| ...|..-..+++...+++
T Consensus 106 e~VvfWkWis~~~l~lVT~------------taVyHWsi~~~s------~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l 167 (494)
T 1bpo_A 106 DDVTFWKWISLNTVALVTD------------NAVYHWSMEGES------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167 (494)
T ss_dssp SCCCEEEEEETTEEEEECS------------SEEEEEESSSSC------CCEEEEECCGGGTTCEEEEEEECTTSSEEEE
T ss_pred CCceEEEecCCCeEEEEcC------------CeeEEecccCCC------CchhheecchhcccceEEEEEECCCCCeEEE
Confidence 44555544 5555555543 379999997532 344444333 356777778888754444
Q ss_pred EEe------CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCC---CEEEEEeCC---CeEEEEeCCCC---c-----e
Q psy14130 194 SAG------FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDG---SRLVTTCKD---KTVRVLDPRTG---L-----V 253 (494)
Q Consensus 194 s~s------~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~~~d---~~v~iwd~~~~---~-----~ 253 (494)
+|- -.|.+.+|..+.+ .-+.+++|...-..+....+. .+++.+.+. ++++|.++... . .
T Consensus 168 ~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk 246 (494)
T 1bpo_A 168 TGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 246 (494)
T ss_dssp EEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCE
T ss_pred EeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccce
Confidence 442 2478899998654 456678886655544443221 244545443 78999998543 1 1
Q ss_pred EEEee----ecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEE
Q psy14130 254 ISQGV----CHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAG 329 (494)
Q Consensus 254 ~~~~~----~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g 329 (494)
...+. ...+- ...+..++..+-++... .-|.|++||++++.....- .+ ....|...+.+....-+ ++-
T Consensus 247 ~vdv~fppe~~~DF-Pvamqvs~kygviyviT----K~G~i~lyDleTgt~i~~n-rI-s~~~iF~t~~~~~~~Gi-~~V 318 (494)
T 1bpo_A 247 AVDVFFPPEAQNDF-PVAMQISEKHDVVFLIT----KYGYIHLYDLETGTCIYMN-RI-SGETIFVTAPHEATAGI-IGV 318 (494)
T ss_dssp EEECCCCTTSTTCC-EEEEEEETTTTEEEEEE----TTSEEEEEETTTCCEEEEE-EC-CSSCEEEEEEETTTTEE-EEE
T ss_pred eeeeeCCcccccCc-eeEEEecccCCEEEEEe----cCceEEEEecccceeeeee-cc-cCCceEEecccCCCCcE-EEE
Confidence 11111 11223 56777888777777776 8999999999987654332 22 33445445555555555 444
Q ss_pred eCCCcEEEEEeeCCCc
Q psy14130 330 KGDGNIRYYELTNERP 345 (494)
Q Consensus 330 ~~dg~i~~wd~~~~~~ 345 (494)
...|.|.--.+.....
T Consensus 319 nr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 319 NRKGQVLSVCVEEENI 334 (494)
T ss_dssp ETTCEEEEEEECTTTH
T ss_pred ccCceEEEEEEccccc
Confidence 5788777777766654
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.88 E-value=0.73 Score=42.06 Aligned_cols=105 Identities=14% Similarity=0.056 Sum_probs=53.1
Q ss_pred CEEEEEeCC--------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCce
Q psy14130 190 NVVASAGFD--------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCK-D-----KTVRVLDPRTGLV 253 (494)
Q Consensus 190 ~~l~s~s~d--------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~-d-----~~v~iwd~~~~~~ 253 (494)
.+++.|+.+ ..+.++|+.+.+-... +......-..+. -++++++.|+. + ..+.+||+.+.+-
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 577777642 4688999987753221 111111112222 35667777765 2 4689999988763
Q ss_pred EEEeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCC
Q psy14130 254 ISQGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDL 298 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~ 298 (494)
...-..........++.. + +++++.| +... .-..+.+||+.+.
T Consensus 178 ~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 178 KELAPMQTARSLFGATVH-D-GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EECCCCSSCCBSCEEEEE-T-TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EECCCCCCchhceEEEEE-C-CEEEEEeccCCCCccceEEEEECCCC
Confidence 222111111111223333 3 4566655 2110 0136888998764
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.28 E-value=0.75 Score=39.31 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=77.5
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE------EEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA------LTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRT 250 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~------~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~ 250 (494)
.+..++|+|+| .+.+. .+|.+.-.+..+... -..+-. --..-.++.|.|+|.+.++ .||.|.-++.-+
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 56699999988 45555 577766666544211 111210 1111468899999988887 569998887633
Q ss_pred Cce-----EEEeeecCC-CCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC-----ceeEeeecCCCceEEeEEe
Q psy14130 251 GLV-----ISQGVCHPG-TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT-----PLALETVDSSSGVLFPYYD 319 (494)
Q Consensus 251 ~~~-----~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~ 319 (494)
... .....+..+ ..+..+.+.|+ +.|.++. |+.+.-....+... ...............+.|+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~-G~Lyav~-----dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPN-GYLYAVH-----GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTT-SCEEEEE-----TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCC-ceEEEEe-----CCcEEecCCCCCCCcccccccceeccCCcceEEEEEEC
Confidence 210 011111111 22556666666 7788776 66644332221110 0001111222334556788
Q ss_pred CCCCEEEEEEeCCCcEEEEEee
Q psy14130 320 HDTRILFLAGKGDGNIRYYELT 341 (494)
Q Consensus 320 ~~~~~l~~~g~~dg~i~~wd~~ 341 (494)
+++....+. +| ++|...
T Consensus 191 ~~G~l~~v~---~g--~~Y~~~ 207 (236)
T 1tl2_A 191 SVGTLFGVQ---GG--KFYEDY 207 (236)
T ss_dssp TTSCEEEEE---TT--EEEEES
T ss_pred CCCcEEEEe---CC--eEEecC
Confidence 888877443 56 445443
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.25 E-value=3.5 Score=38.35 Aligned_cols=147 Identities=8% Similarity=-0.016 Sum_probs=77.3
Q ss_pred cEEEEEEcCCCCC-EEEEEeCCCeEEEEECCCCeEEEEe-------cCCCCceEEEEEcCC---CCEEEEE-eC------
Q psy14130 178 RVGYIEWHPTAEN-VVASAGFDYLIILWDVGKGEALTVI-------DCHPDVINCLSFNRD---GSRLVTT-CK------ 239 (494)
Q Consensus 178 ~V~~~~~~p~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~-------~~h~~~v~~l~~~~~---~~~l~s~-~~------ 239 (494)
....|+|.|+| + +++ +...|.|++++.. +.....+ .........|+|+|+ +..|..+ +.
T Consensus 19 ~P~~i~~~pdG-~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDN-HGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTT-CCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCC-CEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 45799999998 5 554 4567999999853 4322111 112356789999995 4444433 32
Q ss_pred -CCeEEEEeCCCC--c--eEEEe----ee--cCCCCceEEEEECCCCeEEEEEec---------CCCCceEEEEeCCCCC
Q psy14130 240 -DKTVRVLDPRTG--L--VISQG----VC--HPGTRSSKAVFIGDTGRIVTTGFS---------RHSDRQVGLWDENDLN 299 (494)
Q Consensus 240 -d~~v~iwd~~~~--~--~~~~~----~~--~~~~~~~~~~~~~~~~~l~~~g~~---------~~~d~~i~iwd~~~~~ 299 (494)
...|..|++..+ . ....+ .. ........++|.|++..+++.|-. ....+.|.-+|....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666533 1 11111 10 011114579999986444444410 0012467777765320
Q ss_pred ---C--------ceeEeeecCCCceEEeEEeCCCCEEEEE
Q psy14130 300 ---T--------PLALETVDSSSGVLFPYYDHDTRILFLA 328 (494)
Q Consensus 300 ---~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 328 (494)
. ...+... .......++|+|+...|+++
T Consensus 176 p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCCEEEE
Confidence 0 1111112 33457789999954455455
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.25 E-value=2.3 Score=36.33 Aligned_cols=181 Identities=10% Similarity=-0.049 Sum_probs=97.1
Q ss_pred CEEEEEeCCCeEEEEECCCCe------EEEEecC-CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----EEEe
Q psy14130 190 NVVASAGFDYLIILWDVGKGE------ALTVIDC-HPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLV-----ISQG 257 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~------~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~-----~~~~ 257 (494)
.+|+....| +++.=-...+. ....+-. --..+..++|+|+|.+.+. .+|.+.-.+..+... ..+.
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 577777777 66654443332 1222221 1247789999999986666 778888777755221 0111
Q ss_pred eecCCCC-ceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCce-----eEeeecCCCceEEeEEeCCCCEEEEEEeC
Q psy14130 258 VCHPGTR-SSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPL-----ALETVDSSSGVLFPYYDHDTRILFLAGKG 331 (494)
Q Consensus 258 ~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~g~~ 331 (494)
.+..+.. ...+.|.++ +.|.++. ||.|.-++..+..... .......-..+..+.++|+|... +..
T Consensus 82 IG~~Gw~~F~a~~fD~~-G~LYav~-----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly-av~-- 152 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPN-GYLYAVS-----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLY-AVH-- 152 (236)
T ss_dssp EECSCGGGCSEEEECTT-SCEEEEE-----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEE-EEE--
T ss_pred ecccccccceEEEECCC-CCEEEeC-----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEE-EEe--
Confidence 2211111 245556555 7777776 6888888753321110 01111122567889999999877 544
Q ss_pred CCcEEEEEeeCCCc-----eEEecccccCCCCeeEEEEecCCceeeeccceeEEEEeeC
Q psy14130 332 DGNIRYYELTNERP-----YIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 332 dg~i~~wd~~~~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~~ 385 (494)
|+.++-....++.. ....+. ...-...+-+.|.|++.+.+.. ..++|....
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g-~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIG-QGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYP 208 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEE-SSSGGGEEEEEECTTSCEEEEE--TTEEEEESC
T ss_pred CCcEEecCCCCCCCcccccccceec-cCCcceEEEEEECCCCcEEEEe--CCeEEecCC
Confidence 77653322221110 001111 0111234557799998777666 447777654
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.22 E-value=3.4 Score=38.23 Aligned_cols=139 Identities=6% Similarity=-0.030 Sum_probs=61.7
Q ss_pred CeEEEEECCCCeEE--EEecCCCCceEEEEEcCCCCEEEEEeC------CCeEEEEeC--CCCceEE--EeeecCCCCce
Q psy14130 199 YLIILWDVGKGEAL--TVIDCHPDVINCLSFNRDGSRLVTTCK------DKTVRVLDP--RTGLVIS--QGVCHPGTRSS 266 (494)
Q Consensus 199 ~~v~iwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~l~s~~~------d~~v~iwd~--~~~~~~~--~~~~~~~~~~~ 266 (494)
..+.++|+.+.+-. ..+......-.+++.. ++++++.|+. ...+.+||+ .+.+-.. .+...... ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-cc
Confidence 47899999887533 2222111110223332 5666666653 345777887 4443221 11111111 12
Q ss_pred EEEEECCCCeEEEEEecCCCC----------------------ceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 267 KAVFIGDTGRIVTTGFSRHSD----------------------RQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 267 ~~~~~~~~~~l~~~g~~~~~d----------------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
..+...+ +.+++.| +.+ ..+.+||+.+..-.. +........ ...+...+++
T Consensus 246 ~~~~~~~-~~iyv~G---G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~-~~~~~~~~~~- 318 (357)
T 2uvk_A 246 GFAGISN-DSLIFAG---GAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK-SGELSQGRA-YGVSLPWNNS- 318 (357)
T ss_dssp CEEEEET-TEEEEEC---CEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE-EEECSSCCB-SSEEEEETTE-
T ss_pred ceEEEEC-CEEEEEc---CccccCCcccccccceeccccccceeeEEEEecCCCceee-CCCCCCCcc-cceeEEeCCE-
Confidence 1122223 5666666 221 257889988644322 222222111 1112223444
Q ss_pred EEEEEeCCC------cEEEEEeeCCCce
Q psy14130 325 LFLAGKGDG------NIRYYELTNERPY 346 (494)
Q Consensus 325 l~~~g~~dg------~i~~wd~~~~~~~ 346 (494)
|++.|+.++ .|.++++++++..
T Consensus 319 i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 319 LLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp EEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred EEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 447777543 3666688887753
No 334
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.16 E-value=3.1 Score=44.47 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=52.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCC----CCceEEEEECCCCeEEEEEecCCCCceEEEEeCC
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPG----TRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEN 296 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~ 296 (494)
.+.+++..++..++++-+.|+++|+|++.+++++.+...... .........+..+.++.+-|+...++..++|.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~ 316 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLN 316 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEe
Confidence 467788888889999999999999999999998887643211 1112223344445555555555667888888653
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.10 E-value=3.3 Score=42.61 Aligned_cols=152 Identities=11% Similarity=0.073 Sum_probs=80.2
Q ss_pred CCCCEEEEEeCC------CeEEEEECCCCeEEEE--ecCCCCceEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceEEE
Q psy14130 187 TAENVVASAGFD------YLIILWDVGKGEALTV--IDCHPDVINCLSFNRDGSRLVTTCKDK--TVRVLDPRTGLVISQ 256 (494)
Q Consensus 187 ~~~~~l~s~s~d------~~v~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~~~ 256 (494)
++ .+++.|+.+ ..+.+||+.+.+-... +... ..-.+++...++.+++.|+.++ .+.+||+.+.+-...
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 44 577777754 3578899887653221 1111 1112333334788888887654 699999998763222
Q ss_pred ee---ec-CCCCceEEEEECCCCeEEEEEecCCC-------CceEEEEeCCCCCC--ce---eEeee--cCCCceEEeEE
Q psy14130 257 GV---CH-PGTRSSKAVFIGDTGRIVTTGFSRHS-------DRQVGLWDENDLNT--PL---ALETV--DSSSGVLFPYY 318 (494)
Q Consensus 257 ~~---~~-~~~~~~~~~~~~~~~~l~~~g~~~~~-------d~~i~iwd~~~~~~--~~---~~~~~--~~~~~v~~~~~ 318 (494)
-. .. .......+++....+.+++.| +. -..+.+||+.+... .. .+... ........+.+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~G---G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~ 605 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILG---GGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI 605 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEEC---CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEEC---CcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe
Confidence 11 00 111123355555546677766 22 25688999887551 11 11110 11111122222
Q ss_pred eCCCCEEEEEEeC--------CCcEEEEEeeCCCc
Q psy14130 319 DHDTRILFLAGKG--------DGNIRYYELTNERP 345 (494)
Q Consensus 319 ~~~~~~l~~~g~~--------dg~i~~wd~~~~~~ 345 (494)
.++ .||+.|+. ...|.+||+.+.+-
T Consensus 606 -~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 606 -TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp -ETT-EEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred -CCC-EEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 224 45577764 34589999988753
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.88 E-value=4 Score=37.75 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=27.1
Q ss_pred CEEEEEeC-C---------CeEEEEECCCCeEEEE--ec-CCCCceEEEEEcCCCCEEEEEeCC
Q psy14130 190 NVVASAGF-D---------YLIILWDVGKGEALTV--ID-CHPDVINCLSFNRDGSRLVTTCKD 240 (494)
Q Consensus 190 ~~l~s~s~-d---------~~v~iwd~~~~~~~~~--~~-~h~~~v~~l~~~~~~~~l~s~~~d 240 (494)
.+++.|+. + ..+.++|+.+.+-... +. ........+. .++++++.|+.+
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 57777765 2 4688999987753322 11 1111122222 467788888754
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.62 E-value=4.5 Score=37.43 Aligned_cols=166 Identities=11% Similarity=-0.027 Sum_probs=88.7
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec----CCCCceEEEEEcCC----CCEEEEEe--CCCeEE
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID----CHPDVINCLSFNRD----GSRLVTTC--KDKTVR 244 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~----~h~~~v~~l~~~~~----~~~l~s~~--~d~~v~ 244 (494)
.....|+|.|+| .++++--..|.|++++...++. +..+. ........|+++|+ +.+.++-+ .+..|.
T Consensus 32 ~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 346799999998 5777665589999998765543 22221 23567899999995 44433322 345666
Q ss_pred EEeCCCC----------ceE-EEeeecCCCCceEEEEECCCCeEEEEEecC---------CCCceEEEEeCCCC---CCc
Q psy14130 245 VLDPRTG----------LVI-SQGVCHPGTRSSKAVFIGDTGRIVTTGFSR---------HSDRQVGLWDENDL---NTP 301 (494)
Q Consensus 245 iwd~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~---------~~d~~i~iwd~~~~---~~~ 301 (494)
-|.+..+ +.+ ..+..........++|.+++..++++|-.. ...+.|.-.+.... ..+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665541 112 222211111246789999865555555100 01345554554421 000
Q ss_pred ---eeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCC
Q psy14130 302 ---LALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNER 344 (494)
Q Consensus 302 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~ 344 (494)
..+... .......++|+|++.+.++--+.|+.=.|--+..+.
T Consensus 191 f~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 191 FPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGD 235 (347)
T ss_dssp STTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTC
T ss_pred CCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCC
Confidence 112222 334566789999877653323344444444444443
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.36 E-value=11 Score=41.20 Aligned_cols=223 Identities=8% Similarity=0.054 Sum_probs=116.8
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEeccc-ccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeE--EEEec
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHG-HKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEA--LTVID 216 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~ 216 (494)
++.++-...+.|++.+.... ..+..+.. ....|...+.+.. +++.++ ++.+.++.+..++. .....
T Consensus 483 ~~~ivQVt~~~Irli~~~~~-------~~~~~w~~p~~~~I~~As~n~~---~vvva~-g~~l~~fel~~~~L~~~~~~~ 551 (1158)
T 3ei3_A 483 HQQLIQITSASVRLVSQEPK-------ALVSEWKEPQAKNISVASCNSS---QVVVAV-GRALYYLQIHPQELRQISHTE 551 (1158)
T ss_dssp TTEEEEEESSCEEEEESSSC-------CEEEEECCTTCCCCCEEEECSS---EEEEEE-TTEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEecCEEEEEECCCC-------eEEEEEECCCCCEEEEEEeCCC---EEEEEE-CCEEEEEEeeCCceeeecccC
Confidence 44555555556888887654 22333332 2345777776642 444445 57888888776542 22222
Q ss_pred CCCCceEEEEEcCC------CCEEEEEeC-CCeEEEEeCCCCceEEEeeecCCCCceEEEEEC-CCCeEEEEEecCCCCc
Q psy14130 217 CHPDVINCLSFNRD------GSRLVTTCK-DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIG-DTGRIVTTGFSRHSDR 288 (494)
Q Consensus 217 ~h~~~v~~l~~~~~------~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~d~ 288 (494)
-.+.|.|+++.|. +++++.|.. |++++|+++.+.+.+..........+.++.... .+..++..| ..||
T Consensus 552 -l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~ig---l~dG 627 (1158)
T 3ei3_A 552 -MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCA---LGDG 627 (1158)
T ss_dssp -CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEE---ETTS
T ss_pred -CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEE---eCCC
Confidence 3568999999863 469999997 999999999877765443332212233333322 224556677 6898
Q ss_pred eEEEEeCCC--CCCceeEeeecCCCceEEeEEeCCCC-EEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEE-EE
Q psy14130 289 QVGLWDEND--LNTPLALETVDSSSGVLFPYYDHDTR-ILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGL-GF 364 (494)
Q Consensus 289 ~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~-~~ 364 (494)
.+.-+.+.. +.........-+..++.-..+...+. .++++| +.-..+|-- .++.....+. ..++..+ .|
T Consensus 628 ~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s--~rp~liy~~-~~~l~~s~l~----~~~v~~~~~F 700 (1158)
T 3ei3_A 628 ALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS--DRPTVIYSS-NHKLVFSNVN----LKEVNYMCPL 700 (1158)
T ss_dssp EEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES--SSCEEEEES-SSSEEEEEBS----SSCCCEEEEE
T ss_pred eEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC--CCCEEEEEc-CCceEEeccC----hHHhceEecc
Confidence 876665442 21111111112334444444444443 343333 444444433 2332222221 1234333 35
Q ss_pred e----cCCceeeeccceeEEEEeeC
Q psy14130 365 M----PKRGCDVTQCEIFRFFKLHT 385 (494)
Q Consensus 365 ~----p~~~~~~~~~~~~~~~~l~~ 385 (494)
+ |++ +++..++.+||..+..
T Consensus 701 ~se~~~~g-~v~~~~~~LrI~~i~~ 724 (1158)
T 3ei3_A 701 NSDGYPDS-LALANNSTLTIGTIDE 724 (1158)
T ss_dssp CCSSSTTE-EEEECSSCEEEEEECC
T ss_pred CcccCCCc-EEEEcCCceEEEEecc
Confidence 3 333 3344455688888754
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.06 E-value=5.4 Score=41.01 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=79.1
Q ss_pred CEEEEEeCC----CeEEEEECCCCeEEEEe-c------CCCCceEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCC
Q psy14130 190 NVVASAGFD----YLIILWDVGKGEALTVI-D------CHPDVINCLSFNR-DGSRLVTTCKD------KTVRVLDPRTG 251 (494)
Q Consensus 190 ~~l~s~s~d----~~v~iwd~~~~~~~~~~-~------~h~~~v~~l~~~~-~~~~l~s~~~d------~~v~iwd~~~~ 251 (494)
.+++.|+.+ ..+.++|+.+++-...- . .....-.+++..+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 677788753 36888998877533222 1 1111112333333 67777777753 35889999886
Q ss_pred ceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCc--eEEEEeCCCCCCceeEe--eec-CCCceEEeEEeCCCCEEE
Q psy14130 252 LVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDR--QVGLWDENDLNTPLALE--TVD-SSSGVLFPYYDHDTRILF 326 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~--~i~iwd~~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~ 326 (494)
+-...-.......-..++...+ +.+++.| +.++ .+.+||+.+..-..... ... .......+.+..+...||
T Consensus 479 ~W~~~~~~p~~R~~h~~~~~~~-~~iyv~G---G~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 479 EWSMIKSLSHTRFRHSACSLPD-GNVLILG---GVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp EEEECCCCSBCCBSCEEEECTT-SCEEEEC---CBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred cEEECCCCCCCcccceEEEEcC-CEEEEEC---CCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 5322211111111122333234 5666665 2222 79999987643211100 000 111223355566645666
Q ss_pred EEEeC--C-----CcEEEEEeeCCC
Q psy14130 327 LAGKG--D-----GNIRYYELTNER 344 (494)
Q Consensus 327 ~~g~~--d-----g~i~~wd~~~~~ 344 (494)
+.|+. + +.+.+||+.+.+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 88865 2 358899998876
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.70 E-value=5.6 Score=36.03 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=53.3
Q ss_pred CEEEEEeCC-------CeEEEEECCCCeEEEEecCCCCce-EEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceEE
Q psy14130 190 NVVASAGFD-------YLIILWDVGKGEALTVIDCHPDVI-NCLSFNRDGSRLVTTCK------DKTVRVLDPRTGLVIS 255 (494)
Q Consensus 190 ~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~ 255 (494)
.+++.|+.+ ..+.++|+.+.+-...-....... .+++. .++++++.|+. -..+.+||+.+.+-..
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 189 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD 189 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEE
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE
Confidence 577777754 357888988775332211000111 11222 35667777664 2459999999876332
Q ss_pred EeeecCCCCceEEEEECCCCeEEEEE-ecCC-CCceEEEEeCCCCC
Q psy14130 256 QGVCHPGTRSSKAVFIGDTGRIVTTG-FSRH-SDRQVGLWDENDLN 299 (494)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~-~d~~i~iwd~~~~~ 299 (494)
.-..........++.. + +.+++.| +... ....+.+||+.+..
T Consensus 190 ~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 190 LAPMKTPRSMFGVAIH-K-GKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ECCCSSCCBSCEEEEE-T-TEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCCcccceEEEE-C-CEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2111111111233333 3 4565555 2111 12467789987643
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.60 E-value=6.5 Score=43.40 Aligned_cols=219 Identities=11% Similarity=0.098 Sum_probs=122.0
Q ss_pred cEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEEcC
Q psy14130 150 RVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSFNR 229 (494)
Q Consensus 150 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 229 (494)
+|.|-|+..+... .+ ..-..-+.-.||.. +++|--. ..++.|+|+++.+.+..+.- ...|.-=.|-.
T Consensus 49 ~vvIidl~~~~~~------~r----rpi~AdsAIMnP~~-~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis 115 (1630)
T 1xi4_A 49 QVVIIDMNDPSNP------IR----RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS 115 (1630)
T ss_pred eEEEEECCCCCCc------cc----ccccchhhccCCCc-ceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecC
Confidence 6888888876321 11 11112345578886 6776665 68999999998887777663 44555556654
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-ceEEEeeecC---CCCceEEEEECCCCeEEEEEec---CCCCceEEEEeCCCCCCce
Q psy14130 230 DGSRLVTTCKDKTVRVLDPRTG-LVISQGVCHP---GTRSSKAVFIGDTGRIVTTGFS---RHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 230 ~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~g~~---~~~d~~i~iwd~~~~~~~~ 302 (494)
+. .|+-.+ +..|..|++... .++..+..|. +.++......++..+++.+|-+ +.-.|.+.+|..+......
T Consensus 116 ~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ 193 (1630)
T 1xi4_A 116 LN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 193 (1630)
T ss_pred CC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh
Confidence 44 333333 457999999643 3444444442 3346666777887888888853 2245888999877533211
Q ss_pred eEeeecCCCceEEeEE--eCCCCEEEEEEeC---CCcEEEEEeeCC---C-ceEEeccc--cc---CCCCeeEEEEecCC
Q psy14130 303 ALETVDSSSGVLFPYY--DHDTRILFLAGKG---DGNIRYYELTNE---R-PYIHFLNQ--SL---SGAPQRGLGFMPKR 368 (494)
Q Consensus 303 ~~~~~~~~~~v~~~~~--~~~~~~l~~~g~~---dg~i~~wd~~~~---~-~~~~~~~~--~~---~~~~v~~~~~~p~~ 368 (494)
+. +|...-..+.. .+....|++.+.. .+.++|-++... . ++.+.... +. ...-..++..+++.
T Consensus 194 -ie--gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~ 270 (1630)
T 1xi4_A 194 -IE--GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (1630)
T ss_pred -hh--HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc
Confidence 11 11111111111 1111223232221 268999888543 1 11100000 11 12334566667765
Q ss_pred c--eeeeccceeEEEEeeCC
Q psy14130 369 G--CDVTQCEIFRFFKLHTT 386 (494)
Q Consensus 369 ~--~~~~~~~~~~~~~l~~~ 386 (494)
. ++++..|.+.++++.++
T Consensus 271 g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred CEEEEEecCceEEEEecccc
Confidence 4 45677999999999884
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.39 E-value=12 Score=33.78 Aligned_cols=176 Identities=8% Similarity=-0.036 Sum_probs=96.8
Q ss_pred EEEcCCCCCEEEEEeCC-------------CeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEe----CCCeEE
Q psy14130 182 IEWHPTAENVVASAGFD-------------YLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTC----KDKTVR 244 (494)
Q Consensus 182 ~~~~p~~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----~d~~v~ 244 (494)
--++++++.+..+...+ +.|+..++..++... +... . +..|+++++.|+-.. .+..|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD--P--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS--C--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC--C--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 34577875445554443 468888887665332 3221 1 236777888888766 344566
Q ss_pred EEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCE
Q psy14130 245 VLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRI 324 (494)
Q Consensus 245 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (494)
..++.... ...+..+.. ..+.++++.|+.+. ....+|.+-++...... .+ ... ... ..++|++++
T Consensus 133 ~~~~dGs~-~~~lt~~~~-----~~~~~~g~~iy~t~---~g~~~Iy~~~l~g~~~~-~l--~~~--~~~-~~~~P~g~~ 197 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL-----FTCNTSDRYFYYNN---PKNGQLYRYDTASQSEA-LF--YDC--NCY-KPVVLDDTN 197 (302)
T ss_dssp EEETTSCC-CEEEESSCC-----CCSEEETTEEEEEC---TTTCCEEEEETTTTEEE-EE--ECS--CEE-EEEEEETTE
T ss_pred EEECCCCC-eEEEeCCCc-----eEeeEECCEEEEEe---CCCceEEEEECCCCCEE-EE--eCC--Ccc-ceeeecCCE
Confidence 66666333 444444432 23456677888887 45678888888754322 22 122 222 235699999
Q ss_pred EEEEEeCCC-cEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 325 LFLAGKGDG-NIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 325 l~~~g~~dg-~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
|+.+...++ .|..-++..... ..+.. ..+ ..|+|++..+.- ..+.-.|+.+..
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~--~~Lt~----~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNP--VVLTE----ANI--EHYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCC--EECSC----SCE--EEEEEETTEEEEEECSSSCEEEEEET
T ss_pred EEEEEcCCCcEEEEEECCCCCe--EEEeC----CCc--ceEEECCCEEEEEECCCCcEEEEEEC
Confidence 977765443 455555555442 22221 223 347776665543 222356666655
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.05 E-value=2.9 Score=41.08 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=65.7
Q ss_pred EEEEeCCC----Cc-eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCC----------ceeEeee
Q psy14130 243 VRVLDPRT----GL-VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNT----------PLALETV 307 (494)
Q Consensus 243 v~iwd~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~----------~~~~~~~ 307 (494)
+.+.|.+. +. .+.-+....+ ...+..+|++.+++++| ..+.++.++|+++... .......
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pks--PHGv~vsPDGkyi~v~G---KLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~ 374 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKN--PHGCNTSSDGKYFIAAG---KLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP 374 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSS--CCCEEECTTSCEEEEEC---TTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC
T ss_pred eeEEccccccccCCceEEEEeCCCC--CcceeeCCCCCEEEEcC---CCCCeEEEEEeehhhhhhhccccCcccceEeec
Confidence 55666655 22 2333333333 46788899999999999 8899999999874111 1112233
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCC
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNE 343 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~ 343 (494)
....+.+..+|+++| ..|.+---|..|.-|++...
T Consensus 375 e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 375 ELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp BCCSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHH
T ss_pred cCCCcccEEEECCCC-ceEeeeeecceEEEEeccHH
Confidence 445678899999999 66688889999999999753
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=88.93 E-value=13 Score=33.55 Aligned_cols=175 Identities=6% Similarity=-0.026 Sum_probs=96.4
Q ss_pred CCCCCEEEEEe-CCCeEEEEECCCCeEEEEecCCCCceEEEEEcCCCCEEEEEeCC--------------CeEEEEeCCC
Q psy14130 186 PTAENVVASAG-FDYLIILWDVGKGEALTVIDCHPDVINCLSFNRDGSRLVTTCKD--------------KTVRVLDPRT 250 (494)
Q Consensus 186 p~~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------------~~v~iwd~~~ 250 (494)
++++.+.++.. .++.|...+..... ...+.. .. +--++++|..|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 34433444432 24566666764333 333331 11 23457788888877543 4677788876
Q ss_pred CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEe
Q psy14130 251 GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGK 330 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~ 330 (494)
++.. .+.. . ....++++++.|+.+.+++.....|..-++.... ...+. .+. + ..++++++.|+.+..
T Consensus 98 ~~~~-~l~~--~---~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt--~~~--~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 98 HGST-VLDP--D---PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIK--NHY--L--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp CCCE-EEEC--S---CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEE--SSC--C--CCSEEETTEEEEECT
T ss_pred Ccce-Eeec--C---CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEe--CCC--c--eEeeEECCEEEEEeC
Confidence 6522 2221 1 2235677777887765333456677777776433 22222 121 2 457889999988866
Q ss_pred CCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeec--cceeEEEEeeC
Q psy14130 331 GDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQ--CEIFRFFKLHT 385 (494)
Q Consensus 331 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~--~~~~~~~~l~~ 385 (494)
+...|..-++..+.. ..+.. ... ...++|++..+.-. .+..+|+++..
T Consensus 165 g~~~Iy~~~l~g~~~-~~l~~-----~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~l 214 (302)
T 3s25_A 165 KNGQLYRYDTASQSE-ALFYD-----CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNI 214 (302)
T ss_dssp TTCCEEEEETTTTEE-EEEEC-----SCE-EEEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred CCceEEEEECCCCCE-EEEeC-----CCc-cceeeecCCEEEEEEcCCCcEEEEEEC
Confidence 667788878766543 22221 122 23466887766543 22256776655
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.97 E-value=22 Score=35.06 Aligned_cols=192 Identities=10% Similarity=-0.006 Sum_probs=112.3
Q ss_pred CEEEEEe-CCCeEEEEECCCCeEEEEec-CCCCceEEEEEc--CCCCEEEEEeC-------CCeE------------EEE
Q psy14130 190 NVVASAG-FDYLIILWDVGKGEALTVID-CHPDVINCLSFN--RDGSRLVTTCK-------DKTV------------RVL 246 (494)
Q Consensus 190 ~~l~s~s-~d~~v~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~l~s~~~-------d~~v------------~iw 246 (494)
++|+.-. ....|-..++..-++-..++ .....+.++.|- |+-.+++.++. ||.. ...
T Consensus 143 rylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~i 222 (638)
T 3sbq_A 143 KYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAI 222 (638)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEE
T ss_pred EEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEE
Confidence 3454444 56678888888777655443 245678888886 67777777764 3221 112
Q ss_pred eCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecC-----------CCCce-------------------------E
Q psy14130 247 DPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSR-----------HSDRQ-------------------------V 290 (494)
Q Consensus 247 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-----------~~d~~-------------------------i 290 (494)
|..+.+...++.-. +. ...+...++++..++++|+. ++... |
T Consensus 223 D~~tm~v~~Qv~v~-gn-ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv 300 (638)
T 3sbq_A 223 DAETMEMAFQVIVD-GN-LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKT 300 (638)
T ss_dssp ETTTCSEEEEEEES-SC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred cCCccEEEEEEEcC-CC-hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCe
Confidence 33333333332221 11 34455567777788887631 11123 4
Q ss_pred EEEeCCC----CCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCc---------eEEecccccCCC
Q psy14130 291 GLWDEND----LNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERP---------YIHFLNQSLSGA 357 (494)
Q Consensus 291 ~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~---------~~~~~~~~~~~~ 357 (494)
.+.|.+. ... . +..+......-.+..+|||++++++|..+.++.++|++.-.. -.....+...+-
T Consensus 301 ~ViD~~~~~~~~~~-~-~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 301 PVLDGRKKDGKDSK-F-TRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CEEECSCBTTBCCS-S-EEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eEEccccccccCCc-e-EEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 4444443 111 1 111122234455788999999999999999999999984211 001112233355
Q ss_pred CeeEEEEecCCceeee--ccceeEEEEeeC
Q psy14130 358 PQRGLGFMPKRGCDVT--QCEIFRFFKLHT 385 (494)
Q Consensus 358 ~v~~~~~~p~~~~~~~--~~~~~~~~~l~~ 385 (494)
.....+|.++|....+ -|..+--|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccH
Confidence 5788999999965555 389999999876
No 346
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=87.51 E-value=28 Score=35.74 Aligned_cols=203 Identities=9% Similarity=0.008 Sum_probs=99.1
Q ss_pred EEEEE-EcCCCCCEEEEEeCCC----eEEEEECCCCeEEE-Eec-CCCC------ceEEEEEcCCCCEEEEEe-------
Q psy14130 179 VGYIE-WHPTAENVVASAGFDY----LIILWDVGKGEALT-VID-CHPD------VINCLSFNRDGSRLVTTC------- 238 (494)
Q Consensus 179 V~~~~-~~p~~~~~l~s~s~d~----~v~iwd~~~~~~~~-~~~-~h~~------~v~~l~~~~~~~~l~s~~------- 238 (494)
...+. ++|++...+++-|..| .++++|+.+++.+. .+. .-+. ....++|..++..+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34555 8999866666666544 79999999998652 111 0000 113447874444444321
Q ss_pred ---CCCeEEEEeCCCCc--eEEEeeecCCCCceEEEEECCCCe----EEEEEecCCCCceEEEEeCCCCCCceeEeeecC
Q psy14130 239 ---KDKTVRVLDPRTGL--VISQGVCHPGTRSSKAVFIGDTGR----IVTTGFSRHSDRQVGLWDENDLNTPLALETVDS 309 (494)
Q Consensus 239 ---~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 309 (494)
...+|+.|.+.+.. -...+...............+++. ++...........+.+.|...............
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 13578888877653 223333333331223333444442 333321112335677777654222211111111
Q ss_pred CCceEEeEEeCCCCEEEEEE---------eCCCcEEEEEeeCCC-------ceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 310 SSGVLFPYYDHDTRILFLAG---------KGDGNIRYYELTNER-------PYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 310 ~~~v~~~~~~~~~~~l~~~g---------~~dg~i~~wd~~~~~-------~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
... +....++..++.+. ...+.|...|+.++. .....+. ......+.++.|..+..++..
T Consensus 291 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~ 366 (711)
T 4hvt_A 291 DAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT-PTANEVFNFISTTKDRVFLAT 366 (711)
T ss_dssp TCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC-CCTTEEEEEEEECSSCEEEEE
T ss_pred cce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC-CCCCCeEEEEEEECCEEEEEE
Confidence 111 23344555543221 146779999987642 2222222 222456788899887544433
Q ss_pred c-ccee--EEEEeeC
Q psy14130 374 Q-CEIF--RFFKLHT 385 (494)
Q Consensus 374 ~-~~~~--~~~~l~~ 385 (494)
. ++.. .++++..
T Consensus 367 ~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 367 YDNVVAKVVTFTLEN 381 (711)
T ss_dssp EETTEEEEEEECEET
T ss_pred EECCEEEEEEEECCC
Confidence 2 4444 4444443
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.03 E-value=16 Score=35.32 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=60.9
Q ss_pred ceEEEEECCCC-eEEEEEecCCCCceEEEEeCCCCC--Ccee-Ee--eec-----CCCceEEeEEeCC---CCEEEEEEe
Q psy14130 265 SSKAVFIGDTG-RIVTTGFSRHSDRQVGLWDENDLN--TPLA-LE--TVD-----SSSGVLFPYYDHD---TRILFLAGK 330 (494)
Q Consensus 265 ~~~~~~~~~~~-~l~~~g~~~~~d~~i~iwd~~~~~--~~~~-~~--~~~-----~~~~v~~~~~~~~---~~~l~~~g~ 330 (494)
...++|.|++. +++++- ..|.|++++..... .+.. +. ... ...+...++++|+ ..+||++-+
T Consensus 16 P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred ceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 68899999964 688877 78999999754221 1111 10 001 1357888999997 456667644
Q ss_pred CC------------CcEEEEEeeCC----------CceEEecccccCCCCeeEEEEecCCceeee
Q psy14130 331 GD------------GNIRYYELTNE----------RPYIHFLNQSLSGAPQRGLGFMPKRGCDVT 373 (494)
Q Consensus 331 ~d------------g~i~~wd~~~~----------~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 373 (494)
.+ ..|.-|.+..+ +.+.... ..........|+|.|||.+.++
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~-~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVA-ELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEE-ESSSSSCEEEEEECTTSCEEEE
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcC-CCCCcccCCcEeECCCCcEEEE
Confidence 21 13444665431 1122211 1112234688999999988776
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.92 E-value=3.6 Score=37.88 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=65.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEecCC-CCceEEEEEc--C-CCCEEEEE-eCCCeEEEEeCCCCceEEEeeecCCCC
Q psy14130 190 NVVASAGFDYLIILWDVGKGEALTVIDCH-PDVINCLSFN--R-DGSRLVTT-CKDKTVRVLDPRTGLVISQGVCHPGTR 264 (494)
Q Consensus 190 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~--~-~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~ 264 (494)
.+++.++.||.|.-.|..+|+.+.+++.. ..++....-. + ++..++.. +.||.|..+|..+|.....+.......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999999888743 1222221100 1 22333333 589999999998886544333211000
Q ss_pred ceEEEEE-----------CCCCeEEEEEecCCCCceEEEEeCCCCCCce
Q psy14130 265 SSKAVFI-----------GDTGRIVTTGFSRHSDRQVGLWDENDLNTPL 302 (494)
Q Consensus 265 ~~~~~~~-----------~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~ 302 (494)
..-+... ..++.+++ | +.++.+.-.|+++++..-
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~-G---s~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYT-G---SMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TCSEEEECC----------CCEEEEE-C---EEEEEEEEEETTTCCEEE
T ss_pred ccccccCCCceeecccccccCCEEEE-E---ecCCEEEEEECCCCcEEE
Confidence 1111111 13244444 4 479999999998876543
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=77.05 E-value=4.6 Score=37.17 Aligned_cols=116 Identities=13% Similarity=0.039 Sum_probs=66.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCceEEEeeecC-CCCceEEEE--ECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEee--
Q psy14130 232 SRLVTTCKDKTVRVLDPRTGLVISQGVCHP-GTRSSKAVF--IGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALET-- 306 (494)
Q Consensus 232 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~-- 306 (494)
.+++.++.||.|.-+|..+|+.+-++.... .. ...... .+.++.+++..- ..||.|..+|..++........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p--~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEP--FGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECC--STTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEE--CCCCEEEEEECCCCcEEeeecccc
Confidence 478899999999999999999888876541 11 111100 011234444320 2688888888776532221110
Q ss_pred ecCCCceEE---eEE-eC----CCCEEEEEEeCCCcEEEEEeeCCCceEEecc
Q psy14130 307 VDSSSGVLF---PYY-DH----DTRILFLAGKGDGNIRYYELTNERPYIHFLN 351 (494)
Q Consensus 307 ~~~~~~v~~---~~~-~~----~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~ 351 (494)
+-...++.. +.. ++ .+..+ .+|+.+|.+...|+.+|+.+..+-.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~V-y~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKV-YTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHTTCSEEEECC----------CCEEE-EECEEEEEEEEEETTTCCEEEEEST
T ss_pred ceeccccccCCCceeecccccccCCEE-EEEecCCEEEEEECCCCcEEEEEec
Confidence 001111110 011 01 33444 6888999999999999998766543
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.16 E-value=11 Score=41.29 Aligned_cols=39 Identities=23% Similarity=0.156 Sum_probs=32.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC 259 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 259 (494)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 445566777888999999999999999999998887643
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.56 E-value=66 Score=29.97 Aligned_cols=140 Identities=10% Similarity=0.055 Sum_probs=78.0
Q ss_pred eEEEEECCCC--eEEEEecC------CCCceEEEEEc---CC----CCEEEEEe-CCCeEEEEeCCCCceEEEeeecCC-
Q psy14130 200 LIILWDVGKG--EALTVIDC------HPDVINCLSFN---RD----GSRLVTTC-KDKTVRVLDPRTGLVISQGVCHPG- 262 (494)
Q Consensus 200 ~v~iwd~~~~--~~~~~~~~------h~~~v~~l~~~---~~----~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~- 262 (494)
.|.+||+.++ +.++++.- ....+..+.+. ++ +.++..+. ...-|.++|+.+++..+....+..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888888 77776642 23457788887 22 23444433 577899999999885544321100
Q ss_pred ----------------CCceEEEEECC----CCeEEEEEecCCCCceEEEEe---CCCCCCceeEeeec--C-CCceEEe
Q psy14130 263 ----------------TRSSKAVFIGD----TGRIVTTGFSRHSDRQVGLWD---ENDLNTPLALETVD--S-SSGVLFP 316 (494)
Q Consensus 263 ----------------~~~~~~~~~~~----~~~l~~~g~~~~~d~~i~iwd---~~~~~~~~~~~~~~--~-~~~v~~~ 316 (494)
..+..++.+|+ +..++... .....+.--. +++......+..++ . ...-..+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p---lss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA---GSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE---SSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE---CCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 12556666665 45566555 2333332222 22221111122121 1 1334456
Q ss_pred EEeCCCCEEEEEEeCCCcEEEEEeeC
Q psy14130 317 YYDHDTRILFLAGKGDGNIRYYELTN 342 (494)
Q Consensus 317 ~~~~~~~~l~~~g~~dg~i~~wd~~~ 342 (494)
++++....||++--..+.|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 77654455668877888999999875
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.48 E-value=82 Score=30.25 Aligned_cols=29 Identities=10% Similarity=0.056 Sum_probs=24.7
Q ss_pred CCeeEEEEecCCceeeecc-------ceeEEEEeeC
Q psy14130 357 APQRGLGFMPKRGCDVTQC-------EIFRFFKLHT 385 (494)
Q Consensus 357 ~~v~~~~~~p~~~~~~~~~-------~~~~~~~l~~ 385 (494)
..+.++++.|||.+.++.+ ...+||++..
T Consensus 336 ~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 336 GHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp SEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred CcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence 5689999999999988875 5789999984
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=69.30 E-value=73 Score=29.64 Aligned_cols=143 Identities=10% Similarity=0.060 Sum_probs=80.5
Q ss_pred cEEEEEcCCC--CCCCCcccceEecccccccEEEEEEc---CC---CCCEE-EEEeCCCeEEEEECCCCeEEEEecC---
Q psy14130 150 RVKLWYIPDG--GLSGNLNEWIMDLHGHKRRVGYIEWH---PT---AENVV-ASAGFDYLIILWDVGKGEALTVIDC--- 217 (494)
Q Consensus 150 ~v~iw~~~~~--~~~~~~~~~~~~~~~h~~~V~~~~~~---p~---~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~--- 217 (494)
+|.+||+.++ ++.+.+.-+..... ....+..+++. |. +..++ ++=+..+.|.++|+.+++.-+.+..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 4677888777 55443322111122 23567888887 22 12343 4444577899999999876554421
Q ss_pred -C--------------CCceEEEEEcCC----CCEEEEEeCCC-eEEEEe---CCCCc---eEEEeeecCC--CCceEEE
Q psy14130 218 -H--------------PDVINCLSFNRD----GSRLVTTCKDK-TVRVLD---PRTGL---VISQGVCHPG--TRSSKAV 269 (494)
Q Consensus 218 -h--------------~~~v~~l~~~~~----~~~l~s~~~d~-~v~iwd---~~~~~---~~~~~~~~~~--~~~~~~~ 269 (494)
. ...|..|+.+|+ ++.|.-....+ .+.--. ++... .++. .+..+ ......+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~-~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPEL-LGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEE-EEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEE-eeecCCCCCcceEE
Confidence 0 246888999987 67776665543 222222 12221 1222 22232 2123344
Q ss_pred EECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 270 FIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 270 ~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
..+..+.++.+- -....|..|+..+
T Consensus 282 ~D~~~G~ly~~~---~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAE---ANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEE---SSSSEEEEEETTS
T ss_pred EeCCCCeEEEEe---ccCCeEEEEeCCC
Confidence 444557888877 6889999999875
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.59 E-value=22 Score=36.13 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=30.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeee
Q psy14130 221 VINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVC 259 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 259 (494)
.|.++.+ +..++++-+.|.++|+||+++++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555555 477999999999999999999998877655
No 355
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.78 E-value=71 Score=28.15 Aligned_cols=116 Identities=9% Similarity=0.004 Sum_probs=71.3
Q ss_pred cccEEEEEEcCC-CCCEEEEEeCCCeEEEEECCC------CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy14130 176 KRRVGYIEWHPT-AENVVASAGFDYLIILWDVGK------GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRVLDP 248 (494)
Q Consensus 176 ~~~V~~~~~~p~-~~~~l~s~s~d~~v~iwd~~~------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~ 248 (494)
...|..+.. ++ .+..++..+.+|.++...+.. +.....++. .+.+..+........++..+..|.+..++.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 455666544 32 236899999999999988754 222223332 355666666656668888889999888764
Q ss_pred CC-------CceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 249 RT-------GLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 249 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
.. .+-+.-+....+..+..+...+++..++... ..|.++...+..
T Consensus 145 ~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T----~~G~~kr~~~~e 196 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVIT----AKGRVKKISHEE 196 (276)
T ss_dssp GGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEE----TTSCEEEEEGGG
T ss_pred hhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEe----CCCcEEEeEHHH
Confidence 21 1112222223334466666666655676666 788888887653
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.23 E-value=1.5e+02 Score=30.36 Aligned_cols=179 Identities=11% Similarity=0.114 Sum_probs=96.0
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEec-c-cccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEe-c
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDL-H-GHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVI-D 216 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~-~-~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~ 216 (494)
+|.+.+...+.+..++..++... ..... . -....|.++....++ .+.+ |+.+ -+..+|..+++..... .
T Consensus 112 ~g~lWigt~~Gl~~~~~~~~~~~-----~~~~~~~~l~~~~i~~i~~d~~g-~lWi-gt~~-Gl~~~~~~~~~~~~~~~~ 183 (758)
T 3ott_A 112 GDTLWLGALNGLYTYQLQSRKLT-----SFDTRRNGLPNNTIYSIIRTKDN-QIYV-GTYN-GLCRYIPSNGKFEGIPLP 183 (758)
T ss_dssp TTEEEEEETTEEEEEETTTCCEE-----EECHHHHCCSCSCEEEEEECTTC-CEEE-EETT-EEEEEETTTTEEEEECCC
T ss_pred CCcEEEEcCCcceeEeCCCCeEE-----EeccCCCCcCCCeEEEEEEcCCC-CEEE-EeCC-CHhhCccCCCceEEecCC
Confidence 34555555556788887655221 00000 0 123468888888887 4444 4444 5778898776533211 1
Q ss_pred CC----CCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEE
Q psy14130 217 CH----PDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGL 292 (494)
Q Consensus 217 ~h----~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~i 292 (494)
.. ...|.++....++..|..|+. +-+..+|..+++........ ...+.++....+ +.+.++. ++-+.+
T Consensus 184 ~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~-g~lWigT-----~~Gl~~ 255 (758)
T 3ott_A 184 VHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFH-NNSIKSLALDGN-GDLLAGT-----DNGLYV 255 (758)
T ss_dssp CCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEE-EEEEEEEEECTT-CCEEEEE-----TTEEEE
T ss_pred CccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCC-CCeEEEEEEcCC-CCEEEEe-----CCceeE
Confidence 11 234888888887776555654 46888998876532211111 111445544444 5555443 345788
Q ss_pred EeCCCCCCceeEeee------cCCCceEEeEEeCCCCEEEEEEeCCCcEEEE
Q psy14130 293 WDENDLNTPLALETV------DSSSGVLFPYYDHDTRILFLAGKGDGNIRYY 338 (494)
Q Consensus 293 wd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~w 338 (494)
+|..+... ...... -....|.++..+.+|..- + |+..| +.++
T Consensus 256 ~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-i-GT~~G-l~~~ 303 (758)
T 3ott_A 256 YHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIW-L-GTDYG-ISLS 303 (758)
T ss_dssp ECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEE-E-EESSS-EEEE
T ss_pred EecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-E-EeCCc-cccc
Confidence 88765322 111100 022458888888888766 3 33445 5444
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.01 E-value=28 Score=34.68 Aligned_cols=60 Identities=22% Similarity=0.220 Sum_probs=46.7
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 222 INCLSFNRDGSRLVTTCKD------------KTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 222 v~~l~~~~~~~~l~s~~~d------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
.-.|+|+|.|++++.-..+ ..+.+.+..++++.+-+.++.+..++.++|+|++..|++.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4569999999977765532 35677788888887777888888899999999977776654
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=58.28 E-value=1.1e+02 Score=27.77 Aligned_cols=116 Identities=9% Similarity=0.023 Sum_probs=70.5
Q ss_pred cccEEEE-EEcC--CCCCEEEEEeCCCeEEEEECCC-------CeEEEEecCCCCceEEEEEcCCCCEEEEEeCCCeEEE
Q psy14130 176 KRRVGYI-EWHP--TAENVVASAGFDYLIILWDVGK-------GEALTVIDCHPDVINCLSFNRDGSRLVTTCKDKTVRV 245 (494)
Q Consensus 176 ~~~V~~~-~~~p--~~~~~l~s~s~d~~v~iwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d~~v~i 245 (494)
...|.++ .... +. ..++.++.+|.++.-.+.. |.....++. .+.+..+........|+..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e-~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDA-PYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSS-SEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCC-CEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 3445554 4432 33 6899999999999988653 222233443 345555555555667888888999888
Q ss_pred EeCC--C----Cc---eEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCC
Q psy14130 246 LDPR--T----GL---VISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDEND 297 (494)
Q Consensus 246 wd~~--~----~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~ 297 (494)
+... . ++ -+.-+....+..+..+...+++..++.+. ..|.++.-.+..
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T----~~G~~Krt~l~e 228 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVAT----SGGYAKRTAIEE 228 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEE----TTSEEEEEEGGG
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEe----CCCcEEEEEHHH
Confidence 7765 2 11 11112223344466666666555666666 789998887643
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.58 E-value=19 Score=38.39 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777777775 699999999999999999999887754
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.49 E-value=55 Score=35.74 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=30.6
Q ss_pred cEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Q psy14130 178 RVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID 216 (494)
Q Consensus 178 ~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 216 (494)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455556665 699999999999999999999888754
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.39 E-value=73 Score=31.51 Aligned_cols=61 Identities=20% Similarity=0.198 Sum_probs=44.6
Q ss_pred ceEEEEEcCCCCEEEEEeC------------CCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEE
Q psy14130 221 VINCLSFNRDGSRLVTTCK------------DKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTG 281 (494)
Q Consensus 221 ~v~~l~~~~~~~~l~s~~~------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 281 (494)
....|.|+++|.+.++... ...+..++..++++...+.......++.++|+|++..|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567999999998774432 226778888888866666555555589999999977777665
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.27 E-value=29 Score=35.32 Aligned_cols=38 Identities=11% Similarity=0.171 Sum_probs=30.5
Q ss_pred ccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy14130 177 RRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDC 217 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 217 (494)
..|.++.+. . .++++-+.|+++|+||+.+++++.+..-
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 346666554 2 6999999999999999999998887664
No 363
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=44.34 E-value=2.7e+02 Score=28.35 Aligned_cols=210 Identities=8% Similarity=0.012 Sum_probs=112.5
Q ss_pred CcEEEEEEcCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEec---
Q psy14130 140 GGAFLVLPIHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVID--- 216 (494)
Q Consensus 140 ~g~~~~~~~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--- 216 (494)
.|.+.+...+.+..||..+..... ........|.++.. .++ .|..++.+ -+..+|..+++.. .+.
T Consensus 73 ~g~lWigT~~Gl~~yd~~~~~f~~-------~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~~~-~~~~~~ 140 (758)
T 3ott_A 73 NTYLYMGTDNGILVYNYRADRYEQ-------PETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRKLT-SFDTRR 140 (758)
T ss_dssp TTEEEEEETTEEEEEETTTTEECC-------CSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCCEE-EECHHH
T ss_pred CCcEEEEeCCCeEEEeCCCCEEEC-------cccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCeEE-EeccCC
Confidence 345555555568889877653211 01112235777654 344 45555555 6888998766533 331
Q ss_pred --CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceEEEe-eec---CCCCceEEEEECCCCeEEEEEecCCCCceE
Q psy14130 217 --CHPDVINCLSFNRDGSRLVTTCKDKTVRVLDPRTGLVISQG-VCH---PGTRSSKAVFIGDTGRIVTTGFSRHSDRQV 290 (494)
Q Consensus 217 --~h~~~v~~l~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i 290 (494)
.....|.++....+|.+.+ ++.+ -|..+|..+++..... ... ....+.++....+++.+. .| . ++-+
T Consensus 141 ~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lW-ig---t-~~Gl 213 (758)
T 3ott_A 141 NGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVW-IG---T-EGYL 213 (758)
T ss_dssp HCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEE-EE---E-EEEE
T ss_pred CCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEE-EE---E-CCCC
Confidence 1235688888888887665 4444 5778898776532211 111 111245555555534333 34 2 3457
Q ss_pred EEEeCCCCCCceeEeeecCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEeccc-----ccCCCCeeEEEEe
Q psy14130 291 GLWDENDLNTPLALETVDSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQ-----SLSGAPQRGLGFM 365 (494)
Q Consensus 291 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~-----~~~~~~v~~~~~~ 365 (494)
..+|..+... ...... ....|.++..+.+|... + |+. +-+.+++..+++. ..+... ......|.++...
T Consensus 214 ~~~~~~~~~~-~~~~~l-~~~~i~~i~~d~~g~lW-i-gT~-~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D 287 (758)
T 3ott_A 214 FQYFPSTGQI-KQTEAF-HNNSIKSLALDGNGDLL-A-GTD-NGLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFAD 287 (758)
T ss_dssp EEEETTTTEE-EEEEEE-EEEEEEEEEECTTCCEE-E-EET-TEEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEEC
T ss_pred eEEcCCCCeE-EeccCC-CCCeEEEEEEcCCCCEE-E-EeC-CceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEc
Confidence 8888765321 111111 22457788888888776 3 333 4577888766542 222211 1123457888777
Q ss_pred cCCceeeec
Q psy14130 366 PKRGCDVTQ 374 (494)
Q Consensus 366 p~~~~~~~~ 374 (494)
.++.+-+..
T Consensus 288 ~~g~lWiGT 296 (758)
T 3ott_A 288 QEHNIWLGT 296 (758)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 766654443
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.37 E-value=1.1e+02 Score=30.14 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=42.6
Q ss_pred ccEEEEEEcCCCCCEEEEEeC------------CCeEEEEECCCCeEEEEecCC-CCceEEEEEcCCCCEEEEEe
Q psy14130 177 RRVGYIEWHPTAENVVASAGF------------DYLIILWDVGKGEALTVIDCH-PDVINCLSFNRDGSRLVTTC 238 (494)
Q Consensus 177 ~~V~~~~~~p~~~~~l~s~s~------------d~~v~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~ 238 (494)
.....|.|.++| .+.+.... ...|..++..+++....+.+. ...++.++|+||++.|+.+-
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 346789999998 56553321 125777777778766666543 46789999999999887664
No 365
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=35.92 E-value=2.2e+02 Score=24.86 Aligned_cols=205 Identities=11% Similarity=-0.069 Sum_probs=101.8
Q ss_pred cCcEEEEEcCCCCCCCCcccceEecccccccEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCceEEEEE
Q psy14130 148 IHRVKLWYIPDGGLSGNLNEWIMDLHGHKRRVGYIEWHPTAENVVASAGFDYLIILWDVGKGEALTVIDCHPDVINCLSF 227 (494)
Q Consensus 148 ~~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~l~~ 227 (494)
.++|..|-........ .+. .....|..++..... .++. . ||.|..|-......+-.-..-...|..++.
T Consensus 41 ~G~v~~wG~n~~Gqlg---~p~----~~~~~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~ 109 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLT---MPA----ATQSGVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAA 109 (282)
T ss_dssp TTEEEEEECCSSSTTS---CCG----GGGSCCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEE
T ss_pred CCEEEEEeCCCCCCCC---CCc----cCCCCEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEEC
Confidence 4568888765543221 111 122357777776553 4444 4 899999986542211110111346777777
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceEEEeeecCCCCceEEEEECCCCeEEEEEecCCCCceEEEEeCCCCCCceeEeee
Q psy14130 228 NRDGSRLVTTCKDKTVRVLDPRTGLVISQGVCHPGTRSSKAVFIGDTGRIVTTGFSRHSDRQVGLWDENDLNTPLALETV 307 (494)
Q Consensus 228 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 307 (494)
..+.. +.-. ||.|..|-....-.+. ........+..++.-. ...++.. |+.|..|-.....+.- .. .
T Consensus 110 G~~hs--~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~--~~~~~l~-----~G~v~~wG~n~~gqlg-~p-~ 176 (282)
T 3qhy_B 110 GAWAS--YALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGV--YTALAVK-----NGGVIAWGDNYFGQTT-VP-A 176 (282)
T ss_dssp ETTEE--EEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECS--SEEEEEE-----TTEEEEEECCTTSTTS-CC-G
T ss_pred cCCEE--EEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEccc--CEEEEEE-----CCEEEEecCCCCCCCC-Cc-e
Confidence 64433 3334 8999999654321111 0111112244443322 2333322 6778877654322211 00 0
Q ss_pred cCCCceEEeEEeCCCCEEEEEEeCCCcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCceeeeccceeEEEEee
Q psy14130 308 DSSSGVLFPYYDHDTRILFLAGKGDGNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCDVTQCEIFRFFKLH 384 (494)
Q Consensus 308 ~~~~~v~~~~~~~~~~~l~~~g~~dg~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~l~ 384 (494)
.....+..++...+ +.++. .||.|+.|=....-.+-... .....|..++.-....+.++ ++.+..|=-+
T Consensus 177 ~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~~gqlg~p~---~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 177 EAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNRYKQTTVPT---EALSGVSAIASGEWYSLALK-NGKVIAWGSS 245 (282)
T ss_dssp GGGSSEEEEEECSS--EEEEE--ETTEEEEEECCTTSTTCCCG---GGGSSCCEEEECSSCEEEEE-TTEEEEESTT
T ss_pred ecCCCeEEEEecCC--EEEEE--ECCeEEEEECCCCCCCCCCc---ccCCCceEEEcCCCEEEEEE-CCEEEEecCC
Confidence 01234555554333 33233 48999999765432211111 11245778887777777777 8877777433
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.88 E-value=95 Score=30.88 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=35.1
Q ss_pred eEEeEEeCCCCEEEEEEeCC------------CcEEEEEeeCCCceEEecccccCCCCeeEEEEecCCcee
Q psy14130 313 VLFPYYDHDTRILFLAGKGD------------GNIRYYELTNERPYIHFLNQSLSGAPQRGLGFMPKRGCD 371 (494)
Q Consensus 313 v~~~~~~~~~~~l~~~g~~d------------g~i~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 371 (494)
.-.+.|+|.|.++ ++-..+ ..+.+.+..+++. .+++.. ..+..+++++|+||+..+
T Consensus 478 PDNL~fd~~G~Lw-I~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~-P~gaE~TG~~fspDg~tl 545 (592)
T 3zwu_A 478 PDGLGFDKAGRLW-ILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVG-PIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp EEEEEECTTCCEE-EEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEEC-CTTCEEEEEEECTTSSEE
T ss_pred CcceEECCCCCEE-EEecCCCcccccccccccceEEEEeCCCCeE-EEEEeC-CCCccCcCeeECCCCCEE
Confidence 3458999999966 443221 2244445555654 444443 346789999999997643
Done!