Query psy14136
Match_columns 534
No_of_seqs 426 out of 2287
Neff 10.1
Searched_HMMs 46136
Date Fri Aug 16 20:26:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14136.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14136hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 5.9E-45 1.3E-49 345.8 26.2 407 9-480 21-436 (448)
2 TIGR00894 2A0114euk Na(+)-depe 100.0 1.3E-42 2.8E-47 359.6 43.9 446 9-486 11-458 (465)
3 KOG2532|consensus 100.0 5.4E-43 1.2E-47 352.9 37.1 389 95-487 65-456 (466)
4 PRK09556 uhpT sugar phosphate 100.0 1.9E-40 4.1E-45 343.1 29.1 401 15-477 27-448 (467)
5 COG2814 AraJ Arabinose efflux 100.0 1.9E-39 4.1E-44 313.4 30.4 350 95-482 40-390 (394)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3E-39 6.5E-44 328.3 27.6 386 14-467 5-410 (412)
7 PRK11663 regulatory protein Uh 100.0 2.6E-38 5.7E-43 324.0 30.8 401 13-479 19-425 (434)
8 PRK03545 putative arabinose tr 100.0 9.6E-38 2.1E-42 315.8 32.5 346 95-480 36-382 (390)
9 TIGR00893 2A0114 d-galactonate 100.0 1.2E-36 2.6E-41 308.1 30.8 371 95-476 21-397 (399)
10 PRK10642 proline/glycine betai 100.0 1.3E-36 2.9E-41 316.0 30.5 394 16-484 15-436 (490)
11 PRK11551 putative 3-hydroxyphe 100.0 1.5E-36 3.3E-41 309.1 30.0 384 10-478 8-396 (406)
12 PRK11273 glpT sn-glycerol-3-ph 100.0 2.7E-36 5.9E-41 310.7 31.4 407 14-484 26-441 (452)
13 PLN00028 nitrate transmembrane 100.0 3.1E-36 6.8E-41 311.4 31.7 394 15-482 34-437 (476)
14 TIGR01299 synapt_SV2 synaptic 100.0 5.2E-36 1.1E-40 317.4 29.0 401 12-483 162-739 (742)
15 TIGR00903 2A0129 major facilit 100.0 6.2E-36 1.4E-40 297.9 27.3 349 89-475 11-362 (368)
16 TIGR00892 2A0113 monocarboxyla 100.0 2.4E-36 5.2E-41 310.7 24.3 393 13-473 15-416 (455)
17 PRK10406 alpha-ketoglutarate t 100.0 1.4E-35 3.1E-40 303.7 29.3 383 7-477 11-423 (432)
18 PRK14995 methyl viologen resis 100.0 9.5E-36 2.1E-40 309.8 25.8 372 14-448 3-413 (495)
19 PRK03699 putative transporter; 100.0 2.9E-35 6.4E-40 297.9 28.6 380 13-482 3-384 (394)
20 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-35 6E-40 280.7 26.0 384 13-480 10-403 (417)
21 PRK09705 cynX putative cyanate 100.0 6.2E-35 1.3E-39 295.1 30.3 347 95-483 36-387 (393)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 2.1E-35 4.7E-40 297.1 25.8 343 95-471 30-375 (377)
23 PRK10213 nepI ribonucleoside t 100.0 2.7E-34 5.8E-39 290.2 33.5 337 95-471 47-384 (394)
24 PRK09952 shikimate transporter 100.0 1.8E-34 3.9E-39 295.7 29.2 390 10-479 15-434 (438)
25 PRK15402 multidrug efflux syst 100.0 7.7E-34 1.7E-38 289.0 33.1 358 12-448 8-370 (406)
26 TIGR00712 glpT glycerol-3-phos 100.0 1.4E-34 3E-39 296.9 27.7 403 14-480 24-435 (438)
27 TIGR00891 2A0112 putative sial 100.0 1.3E-34 2.8E-39 294.6 26.2 385 10-463 5-401 (405)
28 PRK10091 MFS transport protein 100.0 4.3E-34 9.4E-39 288.1 28.9 345 95-479 30-377 (382)
29 TIGR00881 2A0104 phosphoglycer 100.0 7E-35 1.5E-39 293.6 23.1 371 24-459 2-378 (379)
30 PRK12307 putative sialic acid 100.0 2.1E-34 4.5E-39 295.2 26.9 373 13-462 14-392 (426)
31 TIGR00887 2A0109 phosphate:H+ 100.0 5E-34 1.1E-38 297.7 29.1 417 11-485 10-496 (502)
32 PRK03893 putative sialic acid 100.0 4.5E-34 9.8E-39 298.6 26.4 388 13-473 16-448 (496)
33 PRK15034 nitrate/nitrite trans 100.0 2E-33 4.4E-38 281.5 27.3 374 16-479 33-455 (462)
34 PRK05122 major facilitator sup 100.0 9.5E-33 2.1E-37 280.4 32.4 343 95-482 43-393 (399)
35 PRK15075 citrate-proton sympor 100.0 3.5E-33 7.5E-38 286.3 28.7 353 15-448 13-394 (434)
36 PRK10504 putative transporter; 100.0 4.3E-33 9.4E-38 289.1 29.8 365 20-448 13-415 (471)
37 PRK15403 multidrug efflux syst 100.0 1E-32 2.3E-37 280.3 31.3 330 95-448 43-373 (413)
38 PRK10077 xylE D-xylose transpo 100.0 1.1E-33 2.4E-38 294.4 24.4 404 13-477 8-456 (479)
39 TIGR00710 efflux_Bcr_CflA drug 100.0 1.8E-32 3.8E-37 277.1 32.3 325 95-448 32-361 (385)
40 TIGR00899 2A0120 sugar efflux 100.0 6.6E-33 1.4E-37 279.2 27.9 353 87-477 15-373 (375)
41 KOG2533|consensus 100.0 1.1E-32 2.3E-37 278.6 28.1 355 95-462 73-440 (495)
42 PRK10489 enterobactin exporter 100.0 4.3E-33 9.4E-38 284.4 25.0 354 97-483 46-405 (417)
43 TIGR00711 efflux_EmrB drug res 100.0 3.2E-33 6.9E-38 291.5 23.5 368 18-448 3-410 (485)
44 TIGR00897 2A0118 polyol permea 100.0 7.4E-32 1.6E-36 273.7 32.1 356 96-478 41-401 (402)
45 PRK10133 L-fucose transporter; 100.0 3.3E-32 7.3E-37 278.0 28.4 381 7-472 16-427 (438)
46 TIGR00898 2A0119 cation transp 100.0 1.2E-31 2.5E-36 280.9 32.8 369 90-485 110-502 (505)
47 KOG1330|consensus 100.0 2E-33 4.3E-38 269.8 17.6 376 12-448 28-412 (493)
48 TIGR00879 SP MFS transporter, 100.0 7.4E-33 1.6E-37 287.8 23.2 362 99-477 67-469 (481)
49 PF07690 MFS_1: Major Facilita 100.0 3.2E-33 7E-38 278.7 19.1 325 95-439 24-352 (352)
50 PRK11043 putative transporter; 100.0 2.5E-31 5.5E-36 270.1 32.9 323 95-448 33-357 (401)
51 TIGR00900 2A0121 H+ Antiporter 100.0 2.1E-32 4.6E-37 274.1 23.9 332 95-448 26-363 (365)
52 PRK11102 bicyclomycin/multidru 100.0 1.3E-31 2.9E-36 269.9 29.7 330 87-443 9-344 (377)
53 PRK12382 putative transporter; 100.0 4.4E-31 9.5E-36 267.5 33.2 338 95-477 43-388 (392)
54 TIGR00895 2A0115 benzoate tran 100.0 6.8E-32 1.5E-36 273.8 27.2 370 11-445 11-397 (398)
55 PRK09874 drug efflux system pr 100.0 1.8E-31 3.9E-36 271.9 29.3 345 96-477 42-397 (408)
56 PRK11652 emrD multidrug resist 100.0 2.2E-30 4.7E-35 262.6 34.3 324 95-448 35-360 (394)
57 PRK10473 multidrug efflux syst 100.0 1.8E-30 3.9E-35 263.0 30.3 317 95-448 30-349 (392)
58 TIGR00886 2A0108 nitrite extru 100.0 2.7E-31 5.9E-36 266.5 24.1 345 21-435 5-366 (366)
59 PRK03633 putative MFS family t 100.0 1.2E-30 2.5E-35 263.1 28.4 335 95-475 33-369 (381)
60 PRK11646 multidrug resistance 100.0 2.7E-30 5.9E-35 261.6 29.6 345 95-475 38-385 (400)
61 PRK11195 lysophospholipid tran 100.0 2E-30 4.3E-35 261.9 28.1 345 97-477 32-379 (393)
62 cd06174 MFS The Major Facilita 100.0 2.3E-30 5.1E-35 257.7 28.1 322 95-476 26-350 (352)
63 PRK15011 sugar efflux transpor 100.0 1E-29 2.2E-34 257.2 32.6 344 95-478 43-391 (393)
64 PRK10054 putative transporter; 100.0 5.4E-30 1.2E-34 259.0 27.3 342 95-474 35-380 (395)
65 PRK11010 ampG muropeptide tran 100.0 9.9E-30 2.2E-34 263.4 29.1 350 97-479 41-404 (491)
66 TIGR00902 2A0127 phenyl propri 100.0 2.1E-29 4.6E-34 253.9 28.7 337 95-473 31-374 (382)
67 TIGR00885 fucP L-fucose:H+ sym 100.0 2.1E-29 4.5E-34 255.2 26.5 343 95-468 30-402 (410)
68 TIGR00883 2A0106 metabolite-pr 100.0 6.8E-30 1.5E-34 258.7 22.2 336 100-468 27-391 (394)
69 PRK09528 lacY galactoside perm 100.0 3.2E-29 6.9E-34 256.1 24.3 356 95-480 38-405 (420)
70 TIGR00896 CynX cyanate transpo 100.0 5.3E-29 1.1E-33 248.8 25.0 325 87-448 18-348 (355)
71 PRK11128 putative 3-phenylprop 100.0 3.6E-28 7.8E-33 245.0 28.5 337 95-472 31-373 (382)
72 KOG0569|consensus 100.0 2.5E-28 5.4E-33 243.5 26.6 370 104-490 61-467 (485)
73 PF05977 MFS_3: Transmembrane 100.0 5E-28 1.1E-32 248.7 28.8 351 97-478 39-394 (524)
74 KOG3764|consensus 100.0 2.8E-29 6.1E-34 235.9 17.3 349 95-479 98-455 (464)
75 KOG2504|consensus 100.0 9.2E-29 2E-33 252.8 21.1 397 13-478 42-476 (509)
76 PRK06814 acylglycerophosphoeth 100.0 6.4E-28 1.4E-32 276.2 28.2 339 102-469 51-413 (1140)
77 PRK11902 ampG muropeptide tran 100.0 2.1E-27 4.5E-32 241.2 28.8 348 97-480 28-392 (402)
78 TIGR00882 2A0105 oligosacchari 100.0 2.8E-27 6.1E-32 239.9 28.2 351 95-475 30-392 (396)
79 COG2807 CynX Cyanate permease 100.0 3.6E-27 7.8E-32 220.2 25.7 342 95-477 39-384 (395)
80 TIGR00889 2A0110 nucleoside tr 100.0 2.8E-27 6E-32 240.6 26.7 351 95-479 30-403 (418)
81 PRK08633 2-acyl-glycerophospho 100.0 3.6E-27 7.8E-32 270.9 28.5 343 101-468 45-400 (1146)
82 TIGR00924 yjdL_sub1_fam amino 100.0 2.9E-26 6.3E-31 236.4 30.7 370 97-477 42-467 (475)
83 TIGR00805 oat sodium-independe 100.0 1.1E-27 2.3E-32 253.7 20.5 282 21-353 37-397 (633)
84 COG0738 FucP Fucose permease [ 100.0 1.8E-26 3.9E-31 218.9 24.7 342 95-471 40-402 (422)
85 TIGR00806 rfc RFC reduced fola 100.0 2.2E-26 4.8E-31 226.0 25.6 364 95-472 53-442 (511)
86 PRK10207 dipeptide/tripeptide 100.0 1E-25 2.3E-30 232.3 30.2 379 95-479 42-477 (489)
87 PF06609 TRI12: Fungal trichot 99.9 1.5E-25 3.3E-30 229.2 30.6 373 97-482 73-558 (599)
88 TIGR00901 2A0125 AmpG-related 99.9 1.7E-26 3.8E-31 230.7 21.4 310 95-432 15-355 (356)
89 KOG0252|consensus 99.9 1.3E-27 2.8E-32 228.6 12.5 421 13-488 36-508 (538)
90 TIGR00792 gph sugar (Glycoside 99.9 1E-26 2.3E-31 239.1 19.2 328 95-448 27-380 (437)
91 KOG0254|consensus 99.9 5.2E-26 1.1E-30 237.5 21.4 368 103-490 89-496 (513)
92 KOG0253|consensus 99.9 1.7E-25 3.8E-30 207.6 20.6 394 13-479 74-520 (528)
93 TIGR02718 sider_RhtX_FptX side 99.9 3.1E-24 6.6E-29 217.2 30.2 343 96-473 29-386 (390)
94 KOG2615|consensus 99.9 2.5E-25 5.3E-30 208.2 19.9 337 97-448 62-414 (451)
95 KOG0255|consensus 99.9 1.9E-24 4.2E-29 226.9 29.0 368 95-487 110-502 (521)
96 PTZ00207 hypothetical protein; 99.9 5.6E-25 1.2E-29 226.7 23.5 378 95-478 54-552 (591)
97 PRK09584 tppB putative tripept 99.9 1.9E-23 4.1E-28 216.7 28.8 374 95-477 49-478 (500)
98 PF00083 Sugar_tr: Sugar (and 99.9 1.5E-29 3.2E-34 261.2 -17.5 368 101-489 44-448 (451)
99 KOG4686|consensus 99.9 8E-25 1.7E-29 196.1 15.1 366 95-485 71-450 (459)
100 TIGR00788 fbt folate/biopterin 99.9 2.1E-22 4.5E-27 207.2 19.7 358 95-471 53-436 (468)
101 PF11700 ATG22: Vacuole efflux 99.9 1.1E-20 2.4E-25 192.5 28.7 357 103-482 70-472 (477)
102 PF03825 Nuc_H_symport: Nucleo 99.9 1.1E-20 2.4E-25 189.0 27.9 353 97-479 31-396 (400)
103 PF01306 LacY_symp: LacY proto 99.9 4.7E-21 1E-25 187.9 24.2 355 95-479 35-401 (412)
104 TIGR01301 GPH_sucrose GPH fami 99.9 2.2E-20 4.7E-25 189.1 29.7 362 97-480 33-474 (477)
105 PRK10429 melibiose:sodium symp 99.9 8.1E-22 1.8E-26 204.1 19.0 329 95-448 34-393 (473)
106 PRK15462 dipeptide/tripeptide 99.9 1.3E-19 2.8E-24 184.3 33.3 368 96-470 38-469 (493)
107 KOG2563|consensus 99.9 2.2E-21 4.8E-26 186.5 19.1 396 9-480 37-452 (480)
108 PRK09669 putative symporter Ya 99.9 6.1E-21 1.3E-25 196.3 22.9 325 95-448 37-388 (444)
109 TIGR01272 gluP glucose/galacto 99.9 2.5E-20 5.5E-25 181.3 23.1 277 156-466 8-303 (310)
110 PF13347 MFS_2: MFS/sugar tran 99.9 8.8E-20 1.9E-24 186.8 24.0 327 95-448 29-384 (428)
111 PRK09848 glucuronide transport 99.8 8.4E-20 1.8E-24 188.2 20.6 324 95-448 36-388 (448)
112 COG2270 Permeases of the major 99.8 9.4E-18 2E-22 161.0 24.7 354 101-480 56-431 (438)
113 PRK11462 putative transporter; 99.8 2.4E-18 5.1E-23 177.1 21.5 322 95-448 37-387 (460)
114 COG2211 MelB Na+/melibiose sym 99.8 6.5E-18 1.4E-22 167.4 22.0 330 95-448 40-396 (467)
115 PF03209 PUCC: PUCC protein; 99.8 1.6E-16 3.5E-21 153.1 27.8 357 97-479 9-399 (403)
116 KOG3626|consensus 99.8 1.3E-17 2.9E-22 171.9 21.0 259 95-353 124-459 (735)
117 COG3104 PTR2 Dipeptide/tripept 99.8 1.3E-16 2.9E-21 156.6 26.1 376 97-477 55-486 (498)
118 PF03137 OATP: Organic Anion T 99.8 1E-19 2.2E-24 188.0 -0.2 259 95-353 30-372 (539)
119 KOG2325|consensus 99.7 2.3E-15 4.9E-20 149.7 22.2 355 97-477 65-474 (488)
120 KOG2816|consensus 99.7 1E-14 2.2E-19 147.2 22.8 317 111-448 70-392 (463)
121 PF03092 BT1: BT1 family; Int 99.5 9.7E-14 2.1E-18 141.2 16.2 375 95-482 17-417 (433)
122 TIGR00880 2_A_01_02 Multidrug 99.5 1.1E-14 2.4E-19 124.1 7.7 137 108-246 3-140 (141)
123 PF05631 DUF791: Protein of un 99.5 9.3E-13 2E-17 125.4 18.5 233 96-349 62-304 (354)
124 COG2271 UhpC Sugar phosphate p 99.5 3.8E-13 8.1E-18 129.4 12.7 180 288-484 30-212 (448)
125 PRK11663 regulatory protein Uh 99.5 2.7E-12 5.8E-17 131.8 19.5 170 288-474 24-194 (434)
126 PRK10054 putative transporter; 99.5 1.1E-12 2.5E-17 132.7 15.2 173 287-476 7-180 (395)
127 PRK10642 proline/glycine betai 99.4 9.1E-13 2E-17 137.3 12.7 154 97-251 280-436 (490)
128 PRK15462 dipeptide/tripeptide 99.4 5E-12 1.1E-16 129.0 17.2 175 287-476 9-187 (493)
129 PRK09584 tppB putative tripept 99.4 5.4E-12 1.2E-16 131.3 17.5 182 281-477 14-200 (500)
130 TIGR00924 yjdL_sub1_fam amino 99.4 4.7E-12 1E-16 131.0 16.7 177 287-479 10-193 (475)
131 TIGR00889 2A0110 nucleoside tr 99.4 1.2E-12 2.5E-17 133.4 11.6 147 101-247 249-405 (418)
132 PF07690 MFS_1: Major Facilita 99.4 8.5E-12 1.8E-16 124.2 16.0 165 294-474 3-168 (352)
133 TIGR00893 2A0114 d-galactonate 99.4 4.9E-12 1.1E-16 127.8 13.4 156 305-477 12-168 (399)
134 KOG3762|consensus 99.4 2.1E-11 4.7E-16 120.3 16.8 182 282-480 366-549 (618)
135 PRK09528 lacY galactoside perm 99.4 2.5E-12 5.3E-17 131.6 10.4 148 98-247 257-406 (420)
136 PRK11646 multidrug resistance 99.4 2.1E-11 4.5E-16 123.7 16.9 168 290-474 13-181 (400)
137 TIGR00881 2A0104 phosphoglycer 99.4 5.3E-12 1.1E-16 126.9 12.4 164 297-477 5-170 (379)
138 PRK10489 enterobactin exporter 99.4 9.1E-12 2E-16 127.3 14.3 184 279-478 9-197 (417)
139 PRK10504 putative transporter; 99.3 3.1E-11 6.7E-16 125.5 17.8 174 287-477 10-184 (471)
140 PRK10207 dipeptide/tripeptide 99.3 3.1E-11 6.7E-16 125.0 17.1 177 287-478 14-194 (489)
141 TIGR00900 2A0121 H+ Antiporter 99.3 2E-11 4.3E-16 122.1 14.8 170 292-477 4-178 (365)
142 TIGR00710 efflux_Bcr_CflA drug 99.3 2.8E-11 6.2E-16 122.1 15.7 170 291-477 9-179 (385)
143 PRK03893 putative sialic acid 99.3 4.2E-12 9.1E-17 132.9 9.9 141 95-235 303-444 (496)
144 PRK03699 putative transporter; 99.3 1.5E-10 3.2E-15 117.4 19.9 172 287-474 7-179 (394)
145 PRK05122 major facilitator sup 99.3 1.1E-11 2.3E-16 126.0 11.6 142 104-247 250-392 (399)
146 PRK09556 uhpT sugar phosphate 99.3 7.7E-12 1.7E-16 129.6 10.7 148 95-242 286-447 (467)
147 TIGR00895 2A0115 benzoate tran 99.3 5.7E-12 1.2E-16 127.7 9.4 168 295-479 25-194 (398)
148 TIGR00891 2A0112 putative sial 99.3 3.2E-11 7E-16 122.5 15.0 176 289-479 14-190 (405)
149 PLN00028 nitrate transmembrane 99.3 8.9E-11 1.9E-15 121.8 18.3 171 296-479 45-220 (476)
150 PRK10091 MFS transport protein 99.3 6.2E-11 1.3E-15 119.6 16.7 171 287-474 3-174 (382)
151 TIGR00712 glpT glycerol-3-phos 99.3 8.5E-11 1.8E-15 120.9 18.0 175 287-477 27-205 (438)
152 PRK10213 nepI ribonucleoside t 99.3 7.7E-11 1.7E-15 119.3 17.1 154 302-472 35-189 (394)
153 cd06174 MFS The Major Facilita 99.3 1.3E-11 2.8E-16 122.6 11.0 143 97-241 205-349 (352)
154 PRK03545 putative arabinose tr 99.3 6.5E-11 1.4E-15 119.8 16.2 171 289-476 11-182 (390)
155 TIGR00890 2A0111 Oxalate/Forma 99.3 3.1E-11 6.6E-16 121.2 13.6 159 303-478 19-177 (377)
156 TIGR02332 HpaX 4-hydroxyphenyl 99.3 8.8E-11 1.9E-15 119.6 16.7 175 290-476 11-187 (412)
157 TIGR00711 efflux_EmrB drug res 99.3 6.1E-11 1.3E-15 123.7 15.9 171 290-477 5-176 (485)
158 PRK09874 drug efflux system pr 99.3 2.8E-11 6.1E-16 123.3 12.9 141 104-246 259-400 (408)
159 TIGR00886 2A0108 nitrite extru 99.3 7.5E-11 1.6E-15 118.2 15.5 171 288-469 2-179 (366)
160 TIGR00879 SP MFS transporter, 99.3 1.5E-11 3.3E-16 127.7 10.7 152 97-248 313-474 (481)
161 PF01770 Folate_carrier: Reduc 99.3 3.4E-09 7.3E-14 104.1 26.1 331 97-440 34-394 (412)
162 COG2814 AraJ Arabinose efflux 99.3 1.6E-10 3.5E-15 112.8 16.8 174 287-477 13-187 (394)
163 TIGR00899 2A0120 sugar efflux 99.3 7.5E-11 1.6E-15 118.6 15.2 169 293-476 3-174 (375)
164 PRK11551 putative 3-hydroxyphe 99.3 1.5E-10 3.2E-15 117.9 17.2 169 291-476 19-188 (406)
165 PRK10473 multidrug efflux syst 99.3 1.7E-10 3.8E-15 116.8 17.5 171 290-477 6-177 (392)
166 PRK11043 putative transporter; 99.3 1.6E-10 3.5E-15 117.4 16.7 161 302-478 18-181 (401)
167 PRK14995 methyl viologen resis 99.2 2.6E-10 5.6E-15 119.0 18.4 172 289-477 8-181 (495)
168 PRK12382 putative transporter; 99.2 1.4E-10 3E-15 117.5 15.8 166 286-466 14-187 (392)
169 TIGR01299 synapt_SV2 synaptic 99.2 2.2E-10 4.7E-15 122.8 17.1 165 306-482 186-359 (742)
170 PRK15011 sugar efflux transpor 99.2 3.6E-10 7.8E-15 114.5 17.9 175 286-476 14-192 (393)
171 PRK12307 putative sialic acid 99.2 2E-10 4.3E-15 117.8 16.1 161 289-466 20-181 (426)
172 TIGR00882 2A0105 oligosacchari 99.2 1.9E-10 4.2E-15 116.6 15.4 175 286-477 1-182 (396)
173 PRK09705 cynX putative cyanate 99.2 3.4E-10 7.3E-15 114.6 17.0 152 304-471 26-177 (393)
174 PRK11273 glpT sn-glycerol-3-ph 99.2 5.4E-10 1.2E-14 115.4 18.4 154 307-477 49-207 (452)
175 PRK11195 lysophospholipid tran 99.2 2.5E-10 5.5E-15 115.5 15.4 171 287-478 3-174 (393)
176 TIGR00892 2A0113 monocarboxyla 99.2 2.4E-10 5.3E-15 117.9 15.4 156 306-478 38-194 (455)
177 TIGR00897 2A0118 polyol permea 99.2 4.9E-10 1.1E-14 113.9 17.3 164 287-466 13-181 (402)
178 PRK03633 putative MFS family t 99.2 5.4E-10 1.2E-14 112.7 17.3 150 287-448 6-156 (381)
179 PRK11102 bicyclomycin/multidru 99.2 2.2E-10 4.7E-15 115.4 14.4 157 303-476 7-164 (377)
180 TIGR00883 2A0106 metabolite-pr 99.2 3.1E-11 6.7E-16 122.0 8.1 138 96-233 248-390 (394)
181 PRK11010 ampG muropeptide tran 99.2 1.3E-09 2.9E-14 113.3 19.9 147 97-243 252-402 (491)
182 PRK15402 multidrug efflux syst 99.2 5.3E-10 1.1E-14 113.8 16.5 157 302-475 28-185 (406)
183 TIGR00903 2A0129 major facilit 99.2 4.1E-10 8.8E-15 112.5 15.1 158 301-476 5-163 (368)
184 PRK11652 emrD multidrug resist 99.2 5.9E-10 1.3E-14 113.0 16.5 167 290-473 11-178 (394)
185 PRK10077 xylE D-xylose transpo 99.2 1.1E-10 2.3E-15 121.7 10.9 152 97-248 300-461 (479)
186 TIGR00902 2A0127 phenyl propri 99.2 2.5E-10 5.5E-15 115.1 13.2 139 97-239 234-374 (382)
187 PRK15403 multidrug efflux syst 99.2 1.2E-09 2.5E-14 111.4 17.2 155 304-475 33-188 (413)
188 KOG4332|consensus 99.1 1.3E-09 2.9E-14 98.1 14.9 345 95-473 64-426 (454)
189 TIGR00885 fucP L-fucose:H+ sym 99.1 2E-09 4.4E-14 109.3 18.1 175 289-474 5-203 (410)
190 PRK15034 nitrate/nitrite trans 99.1 1.4E-09 3.1E-14 109.9 16.5 180 287-477 34-231 (462)
191 TIGR00806 rfc RFC reduced fola 99.1 2.4E-09 5.3E-14 106.5 17.6 160 308-482 46-207 (511)
192 TIGR00887 2A0109 phosphate:H+ 99.1 1.6E-09 3.5E-14 113.4 14.2 153 320-482 53-229 (502)
193 PRK11128 putative 3-phenylprop 99.1 2.4E-09 5.2E-14 108.0 14.8 161 296-472 13-173 (382)
194 KOG1330|consensus 99.1 3.9E-10 8.5E-15 109.9 8.5 175 289-479 35-210 (493)
195 PRK09952 shikimate transporter 99.1 1.4E-09 3E-14 111.8 13.0 149 97-246 280-434 (438)
196 TIGR00805 oat sodium-independe 99.1 2.5E-09 5.3E-14 114.1 15.3 168 304-481 49-284 (633)
197 PF05977 MFS_3: Transmembrane 99.1 4.3E-09 9.4E-14 109.0 16.6 184 282-477 5-189 (524)
198 KOG3098|consensus 99.1 1.9E-08 4E-13 100.6 20.1 314 109-443 56-409 (461)
199 PRK10133 L-fucose transporter; 99.0 1E-08 2.2E-13 105.1 18.7 148 288-446 27-177 (438)
200 KOG3764|consensus 99.0 8.5E-10 1.8E-14 105.3 9.8 149 318-482 101-251 (464)
201 TIGR00792 gph sugar (Glycoside 99.0 3.3E-09 7.1E-14 109.1 14.9 122 101-223 255-384 (437)
202 TIGR01301 GPH_sucrose GPH fami 99.0 4.5E-09 9.7E-14 107.1 15.3 183 287-479 4-219 (477)
203 PRK11902 ampG muropeptide tran 99.0 7E-09 1.5E-13 105.4 16.5 169 293-477 5-181 (402)
204 TIGR00880 2_A_01_02 Multidrug 99.0 2.2E-09 4.7E-14 91.1 10.7 134 328-477 3-137 (141)
205 PRK15075 citrate-proton sympor 99.0 1.8E-09 3.8E-14 110.9 11.9 128 97-224 268-399 (434)
206 PF02487 CLN3: CLN3 protein; 99.0 1.1E-07 2.3E-12 93.6 23.5 324 99-443 55-392 (402)
207 COG3104 PTR2 Dipeptide/tripept 99.0 2.9E-09 6.3E-14 105.4 12.5 186 283-483 16-211 (498)
208 TIGR00896 CynX cyanate transpo 99.0 5.9E-09 1.3E-13 104.1 14.2 149 306-470 19-167 (355)
209 PTZ00207 hypothetical protein; 99.0 7.5E-09 1.6E-13 107.8 14.8 158 302-477 42-204 (591)
210 PRK06814 acylglycerophosphoeth 99.0 8.4E-09 1.8E-13 119.0 16.7 184 282-478 6-195 (1140)
211 TIGR00894 2A0114euk Na(+)-depe 99.0 2.6E-07 5.5E-12 95.9 26.0 381 95-478 64-446 (465)
212 PF01306 LacY_symp: LacY proto 99.0 4.3E-09 9.3E-14 104.0 11.5 177 284-473 4-183 (412)
213 COG2223 NarK Nitrate/nitrite t 99.0 1.3E-08 2.8E-13 98.6 14.5 178 287-481 14-196 (417)
214 TIGR02718 sider_RhtX_FptX side 99.0 7.7E-09 1.7E-13 104.7 13.6 141 97-238 237-385 (390)
215 TIGR01272 gluP glucose/galacto 99.0 3.7E-09 7.9E-14 103.0 10.6 130 97-230 172-301 (310)
216 PF06813 Nodulin-like: Nodulin 99.0 4.7E-09 1E-13 97.1 10.6 152 95-249 29-186 (250)
217 PF11700 ATG22: Vacuole efflux 98.9 5.2E-09 1.1E-13 107.2 11.6 147 95-241 309-465 (477)
218 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.5E-07 3.2E-12 99.9 22.3 149 95-243 15-181 (654)
219 KOG0569|consensus 98.9 1.4E-08 3E-13 102.5 13.5 154 97-251 299-461 (485)
220 PRK10406 alpha-ketoglutarate t 98.9 3.2E-08 6.9E-13 101.6 16.6 164 296-470 31-211 (432)
221 TIGR00769 AAA ADP/ATP carrier 98.9 1.4E-06 3E-11 88.5 27.3 253 95-355 30-335 (472)
222 TIGR00898 2A0119 cation transp 98.9 1.4E-08 3E-13 106.6 13.0 136 109-247 361-497 (505)
223 TIGR00901 2A0125 AmpG-related 98.9 2.3E-08 4.9E-13 99.9 13.6 154 306-476 7-176 (356)
224 PF06963 FPN1: Ferroportin1 (F 98.9 5.7E-07 1.2E-11 90.2 23.2 329 105-441 40-411 (432)
225 PRK09848 glucuronide transport 98.8 5E-08 1.1E-12 100.7 15.2 126 97-222 258-391 (448)
226 PRK08633 2-acyl-glycerophospho 98.8 2.3E-08 4.9E-13 115.8 13.6 140 95-236 260-402 (1146)
227 COG2270 Permeases of the major 98.8 2.5E-08 5.3E-13 96.8 10.7 140 95-236 280-421 (438)
228 KOG4686|consensus 98.8 2.3E-08 5E-13 91.0 9.4 138 95-236 292-435 (459)
229 PF06609 TRI12: Fungal trichot 98.8 2.2E-07 4.7E-12 96.4 17.1 178 284-480 37-219 (599)
230 KOG2504|consensus 98.8 3.7E-08 8E-13 101.6 10.7 174 290-479 45-222 (509)
231 KOG2615|consensus 98.7 2.3E-08 5E-13 95.2 7.7 116 320-447 65-181 (451)
232 KOG0637|consensus 98.7 3.1E-07 6.8E-12 89.7 13.7 250 97-356 61-365 (498)
233 PRK09669 putative symporter Ya 98.7 3.9E-07 8.5E-12 93.9 15.3 121 103-223 264-392 (444)
234 COG0738 FucP Fucose permease [ 98.7 1.2E-06 2.6E-11 84.7 17.0 163 303-475 28-207 (422)
235 KOG2532|consensus 98.7 6.6E-08 1.4E-12 98.5 9.0 154 317-484 67-222 (466)
236 PF13347 MFS_2: MFS/sugar tran 98.6 1.3E-07 2.8E-12 96.9 10.3 175 297-480 11-200 (428)
237 PF03825 Nuc_H_symport: Nucleo 98.6 4.3E-07 9.3E-12 91.4 13.6 177 291-481 6-183 (400)
238 COG0477 ProP Permeases of the 98.6 1.9E-07 4.1E-12 90.4 10.2 133 103-235 39-176 (338)
239 PRK10429 melibiose:sodium symp 98.6 8.4E-07 1.8E-11 92.2 15.5 175 291-474 10-197 (473)
240 COG2211 MelB Na+/melibiose sym 98.6 1.5E-06 3.4E-11 87.0 15.5 182 291-477 16-206 (467)
241 KOG0254|consensus 98.5 1.3E-06 2.8E-11 91.8 14.8 143 325-482 91-234 (513)
242 PRK11462 putative transporter; 98.5 1.9E-06 4.1E-11 89.0 15.6 176 294-474 16-200 (460)
243 PF06813 Nodulin-like: Nodulin 98.5 1.4E-06 3.1E-11 80.6 12.1 136 301-448 16-157 (250)
244 COG2807 CynX Cyanate permease 98.5 2.9E-06 6.3E-11 80.9 14.0 144 97-243 237-384 (395)
245 TIGR00788 fbt folate/biopterin 98.5 2.7E-06 5.9E-11 88.0 14.8 179 287-480 26-211 (468)
246 KOG3762|consensus 98.5 1.9E-07 4.2E-12 92.9 5.4 145 95-241 398-544 (618)
247 PF00083 Sugar_tr: Sugar (and 98.4 1.6E-08 3.5E-13 104.4 -3.1 146 325-482 48-196 (451)
248 KOG3574|consensus 98.4 2E-05 4.3E-10 75.3 17.1 329 98-448 60-431 (510)
249 KOG0253|consensus 98.4 2.6E-07 5.7E-12 87.5 4.4 128 113-246 391-521 (528)
250 KOG0255|consensus 98.4 2E-06 4.3E-11 90.7 11.5 146 318-482 113-259 (521)
251 KOG3810|consensus 98.3 6.3E-06 1.4E-10 77.7 11.9 344 117-477 56-420 (433)
252 KOG2533|consensus 98.3 2.3E-06 5.1E-11 87.6 9.2 154 316-480 74-230 (495)
253 PF06779 DUF1228: Protein of u 98.2 1E-06 2.3E-11 66.0 3.1 73 86-160 9-82 (85)
254 KOG0252|consensus 98.1 8.4E-06 1.8E-10 80.0 8.3 109 320-438 81-196 (538)
255 PF00854 PTR2: POT family; In 98.1 1.3E-05 2.9E-10 80.4 10.0 109 134-242 2-121 (372)
256 KOG2325|consensus 98.1 3.7E-05 7.9E-10 77.5 12.3 185 288-483 35-234 (488)
257 KOG1237|consensus 98.1 0.00038 8.3E-09 72.9 19.8 147 95-241 65-242 (571)
258 TIGR00926 2A1704 Peptide:H+ sy 98.1 6.6E-05 1.4E-09 80.0 14.4 168 303-480 3-184 (654)
259 PF05978 UNC-93: Ion channel r 98.1 2.5E-05 5.4E-10 66.9 8.9 107 107-216 41-148 (156)
260 PF05631 DUF791: Protein of un 98.0 0.00076 1.6E-08 65.1 18.3 148 317-479 63-217 (354)
261 PF03209 PUCC: PUCC protein; 98.0 0.00024 5.1E-09 69.7 14.8 145 95-239 236-393 (403)
262 PF13000 Acatn: Acetyl-coenzym 97.9 0.0011 2.4E-08 66.3 19.3 272 171-448 131-467 (544)
263 PF03219 TLC: TLC ATP/ADP tran 97.9 0.016 3.4E-07 59.6 28.1 248 101-355 56-351 (491)
264 KOG2816|consensus 97.8 0.0006 1.3E-08 69.6 16.0 128 332-478 71-199 (463)
265 COG3202 ATP/ADP translocase [E 97.8 0.032 6.9E-07 56.1 26.6 246 101-352 59-351 (509)
266 PF01770 Folate_carrier: Reduc 97.8 0.0011 2.4E-08 65.7 16.3 163 306-483 22-187 (412)
267 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00015 3.2E-09 54.0 6.5 63 292-355 5-67 (77)
268 PF07672 MFS_Mycoplasma: Mycop 97.7 0.0013 2.7E-08 60.4 13.4 99 190-299 2-106 (267)
269 PF12832 MFS_1_like: MFS_1 lik 97.6 4.2E-05 9.2E-10 56.9 3.2 55 89-143 20-75 (77)
270 PF03092 BT1: BT1 family; Int 97.6 0.00039 8.6E-09 71.0 11.1 160 310-480 12-177 (433)
271 KOG3880|consensus 97.5 0.0036 7.7E-08 58.5 13.9 318 105-443 64-399 (409)
272 PF06963 FPN1: Ferroportin1 (F 97.5 0.0082 1.8E-07 60.6 17.7 181 287-475 2-197 (432)
273 TIGR00939 2a57 Equilibrative N 97.4 0.013 2.8E-07 59.8 18.0 56 386-441 371-427 (437)
274 KOG2563|consensus 97.3 0.0051 1.1E-07 60.9 13.2 149 312-471 69-228 (480)
275 KOG1479|consensus 97.3 0.0065 1.4E-07 59.8 13.9 59 386-444 342-400 (406)
276 PRK03612 spermidine synthase; 97.2 0.0054 1.2E-07 64.0 13.5 140 97-238 44-191 (521)
277 PF03137 OATP: Organic Anion T 97.2 5.5E-05 1.2E-09 79.0 -1.4 174 301-484 16-256 (539)
278 PRK03612 spermidine synthase; 97.0 0.018 3.9E-07 60.2 15.1 143 298-447 25-170 (521)
279 KOG3626|consensus 97.0 0.0091 2E-07 63.3 12.6 171 305-485 114-350 (735)
280 TIGR00769 AAA ADP/ATP carrier 96.9 0.069 1.5E-06 54.7 17.4 150 287-446 7-189 (472)
281 PF05978 UNC-93: Ion channel r 96.6 0.059 1.3E-06 46.2 12.4 106 328-445 42-148 (156)
282 KOG0637|consensus 96.5 0.014 3.1E-07 57.9 9.0 148 287-444 32-201 (498)
283 COG0477 ProP Permeases of the 96.3 0.072 1.6E-06 50.9 13.2 148 307-468 22-175 (338)
284 PF06779 DUF1228: Protein of u 96.0 0.021 4.6E-07 42.9 5.9 74 300-384 5-78 (85)
285 PF02487 CLN3: CLN3 protein; 96.0 0.1 2.2E-06 52.1 12.2 168 291-477 4-194 (402)
286 PF00854 PTR2: POT family; In 95.1 0.18 3.9E-06 50.5 10.9 88 388-480 34-125 (372)
287 KOG1479|consensus 94.7 2 4.2E-05 42.8 16.2 184 288-481 19-207 (406)
288 TIGR00939 2a57 Equilibrative N 94.1 1.2 2.7E-05 45.4 14.1 31 389-419 108-138 (437)
289 PF13000 Acatn: Acetyl-coenzym 93.9 0.63 1.4E-05 47.3 10.9 66 291-356 4-73 (544)
290 KOG3574|consensus 93.7 1.2 2.7E-05 43.6 12.1 183 287-482 31-240 (510)
291 PF01733 Nucleoside_tran: Nucl 93.2 0.022 4.7E-07 55.5 -0.5 113 327-441 186-303 (309)
292 KOG3097|consensus 93.0 0.93 2E-05 43.4 9.9 67 119-188 74-140 (390)
293 KOG1237|consensus 90.8 3.9 8.4E-05 43.4 12.8 172 291-477 41-244 (571)
294 PF03547 Mem_trans: Membrane t 89.9 3.3 7.1E-05 41.7 11.2 19 332-350 4-22 (385)
295 KOG4830|consensus 89.4 0.32 6.9E-06 44.7 3.0 65 279-343 193-257 (412)
296 PF07857 DUF1632: CEO family ( 88.1 3.8 8.2E-05 38.1 9.2 25 293-317 184-208 (254)
297 KOG3098|consensus 88.0 10 0.00022 38.9 12.8 106 325-442 51-158 (461)
298 COG4262 Predicted spermidine s 85.6 8.2 0.00018 37.5 9.9 114 101-216 41-162 (508)
299 KOG2601|consensus 85.5 2.9 6.2E-05 40.9 7.0 123 113-235 73-217 (503)
300 KOG4332|consensus 83.1 2.3 5E-05 39.6 5.0 145 313-473 62-215 (454)
301 KOG2601|consensus 80.0 13 0.00029 36.6 9.1 66 291-356 31-96 (503)
302 PF07857 DUF1632: CEO family ( 78.7 21 0.00045 33.4 9.8 24 456-479 114-137 (254)
303 PF02990 EMP70: Endomembrane p 75.5 29 0.00064 36.4 11.2 70 280-350 251-320 (521)
304 PF03219 TLC: TLC ATP/ADP tran 75.1 1.1E+02 0.0024 31.9 23.3 57 410-471 305-363 (491)
305 COG4262 Predicted spermidine s 74.0 86 0.0019 30.8 12.5 125 318-446 38-163 (508)
306 KOG2881|consensus 71.7 48 0.001 30.7 9.8 22 335-356 252-273 (294)
307 PF03348 Serinc: Serine incorp 71.0 1.3E+02 0.0028 30.8 19.0 24 455-478 281-304 (429)
308 KOG4255|consensus 69.9 1.1E+02 0.0024 29.7 17.4 32 388-419 113-144 (439)
309 PF06912 DUF1275: Protein of u 67.4 91 0.002 28.1 11.3 30 199-229 168-197 (209)
310 PRK00293 dipZ thiol:disulfide 67.1 1.8E+02 0.0039 31.0 17.8 31 321-351 323-353 (571)
311 PF01733 Nucleoside_tran: Nucl 64.2 2.2 4.8E-05 41.4 0.0 24 396-419 6-29 (309)
312 TIGR00844 c_cpa1 na(+)/h(+) an 59.8 2.8E+02 0.0061 30.8 24.1 32 202-233 110-141 (810)
313 COG2962 RarD Predicted permeas 59.3 1.1E+02 0.0024 29.0 10.0 32 280-311 62-93 (293)
314 KOG3810|consensus 55.9 18 0.0004 35.3 4.5 96 106-201 274-369 (433)
315 KOG3880|consensus 54.1 55 0.0012 31.6 7.2 62 154-215 338-400 (409)
316 PF06027 DUF914: Eukaryotic pr 53.4 1.5E+02 0.0033 29.1 10.5 19 456-474 285-303 (334)
317 TIGR03644 marine_trans_1 proba 50.6 2.8E+02 0.0062 28.0 15.1 25 331-355 244-268 (404)
318 COG3202 ATP/ADP translocase [E 50.5 3.1E+02 0.0068 28.5 21.8 68 403-475 300-370 (509)
319 PF05255 UPF0220: Uncharacteri 49.3 1.3E+02 0.0029 26.0 8.4 56 186-241 14-76 (166)
320 COG5336 Uncharacterized protei 49.2 59 0.0013 25.6 5.4 30 419-448 39-68 (116)
321 PF07672 MFS_Mycoplasma: Mycop 47.7 2.4E+02 0.0053 26.5 10.3 67 105-172 143-218 (267)
322 COG1457 CodB Purine-cytosine p 46.5 3.4E+02 0.0074 27.8 19.9 69 283-353 90-158 (442)
323 PF11947 DUF3464: Protein of u 44.1 1.2E+02 0.0025 25.9 7.0 28 410-437 118-145 (153)
324 PRK10263 DNA translocase FtsK; 40.4 3E+02 0.0066 32.3 11.5 22 331-352 60-81 (1355)
325 PTZ00370 STEVOR; Provisional 40.0 22 0.00048 33.3 2.3 34 454-487 255-288 (296)
326 COG5336 Uncharacterized protei 38.6 1.4E+02 0.003 23.6 6.0 25 331-355 50-74 (116)
327 KOG1278|consensus 37.4 35 0.00075 35.3 3.4 32 320-351 356-387 (628)
328 PF11299 DUF3100: Protein of u 35.0 28 0.00061 31.6 2.1 28 162-189 175-202 (241)
329 COG3619 Predicted membrane pro 34.9 3.6E+02 0.0079 24.7 15.1 48 73-132 37-84 (226)
330 PF07760 DUF1616: Protein of u 34.6 4.2E+02 0.009 25.3 10.6 60 161-222 22-82 (287)
331 PF01102 Glycophorin_A: Glycop 34.0 33 0.00071 27.9 2.2 9 472-480 83-91 (122)
332 PF06679 DUF1180: Protein of u 32.9 78 0.0017 27.3 4.4 15 456-470 94-108 (163)
333 PF12805 FUSC-like: FUSC-like 32.5 1.3E+02 0.0028 28.8 6.4 36 137-173 3-38 (284)
334 TIGR01478 STEVOR variant surfa 31.9 51 0.0011 30.9 3.3 34 454-487 259-292 (295)
335 PF01528 Herpes_glycop: Herpes 30.3 1.6E+02 0.0035 29.2 6.7 19 416-434 268-286 (374)
336 PF04277 OAD_gamma: Oxaloaceta 30.2 1.6E+02 0.0034 21.6 5.3 22 455-476 11-32 (79)
337 KOG4112|consensus 29.3 1.4E+02 0.003 22.8 4.5 25 423-448 24-48 (101)
338 KOG3097|consensus 29.3 4.2E+02 0.0092 26.1 8.9 62 287-355 29-90 (390)
339 COG1230 CzcD Co/Zn/Cd efflux s 29.2 5.3E+02 0.011 24.8 12.0 49 95-149 52-103 (296)
340 TIGR00836 amt ammonium transpo 28.8 6.3E+02 0.014 25.6 13.1 25 331-355 230-254 (403)
341 PF12805 FUSC-like: FUSC-like 28.7 4.4E+02 0.0095 25.1 9.4 17 386-402 22-38 (284)
342 COG2119 Predicted membrane pro 28.0 1.1E+02 0.0025 26.8 4.5 38 112-149 143-180 (190)
343 COG2076 EmrE Membrane transpor 27.1 3E+02 0.0065 21.8 6.4 61 123-184 20-80 (106)
344 PF08611 DUF1774: Fungal prote 27.1 3E+02 0.0065 21.4 6.3 22 454-475 50-71 (97)
345 TIGR01667 YCCS_YHJK integral m 26.8 3.2E+02 0.007 30.0 8.9 52 121-173 41-96 (701)
346 COG2119 Predicted membrane pro 26.0 4.6E+02 0.01 23.1 11.9 24 332-355 143-166 (190)
347 PTZ00370 STEVOR; Provisional 25.9 85 0.0019 29.6 3.7 38 208-245 243-280 (296)
348 PF02694 UPF0060: Uncharacteri 24.2 1.2E+02 0.0025 24.0 3.6 49 102-150 53-101 (107)
349 PF10183 ESSS: ESSS subunit of 24.1 61 0.0013 25.6 2.1 31 218-248 55-85 (105)
350 PHA03231 glycoprotein BALF4; P 23.0 98 0.0021 34.1 4.0 20 426-445 678-697 (829)
351 PRK13108 prolipoprotein diacyl 22.9 8.6E+02 0.019 25.2 17.5 20 420-439 222-241 (460)
352 PRK10621 hypothetical protein; 22.6 6.4E+02 0.014 23.6 13.6 23 202-224 83-105 (266)
353 PF12794 MscS_TM: Mechanosensi 22.6 4.1E+02 0.009 26.1 8.1 7 222-228 1-7 (340)
354 PF11368 DUF3169: Protein of u 21.8 3.1E+02 0.0067 25.5 6.8 24 327-350 132-155 (248)
355 COG4769 Predicted membrane pro 21.7 2E+02 0.0043 24.8 4.7 53 111-171 81-133 (181)
356 PF04341 DUF485: Protein of un 21.6 3.7E+02 0.0081 20.5 6.7 60 287-349 16-75 (91)
357 TIGR03173 pbuX xanthine permea 21.5 5.2E+02 0.011 26.1 8.8 95 95-191 20-114 (406)
358 PF12670 DUF3792: Protein of u 21.3 4.3E+02 0.0094 21.2 6.8 48 198-245 43-90 (116)
359 PF04024 PspC: PspC domain; I 21.3 1E+02 0.0023 21.5 2.6 27 222-248 31-60 (61)
360 TIGR01666 YCCS hypothetical me 21.2 2.6E+02 0.0056 30.7 6.8 51 122-173 42-96 (704)
361 PRK02237 hypothetical protein; 20.4 1.9E+02 0.0041 22.9 4.0 48 103-150 56-103 (109)
362 PF04226 Transgly_assoc: Trans 20.1 2.2E+02 0.0048 18.7 3.8 32 207-238 5-40 (48)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-45 Score=345.78 Aligned_cols=407 Identities=20% Similarity=0.285 Sum_probs=336.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136 9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE 88 (534)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (534)
++..++|++++..++++|...|+.|.+++.++|.|
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l--------------------------------------------- 55 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPAL--------------------------------------------- 55 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHH---------------------------------------------
Confidence 34567889999999999999999999999999999
Q ss_pred CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQ 168 (534)
Q Consensus 89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~ 168 (534)
.+|.++|.+|+|++.+++++.|.++.++.|.++||.++|+.+.+++++.++..++.++. ++++.+.++.++.
T Consensus 56 ------~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs--~s~~~~~~l~~ln 127 (448)
T COG2271 56 ------IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS--PSLFLFAVLWVLN 127 (448)
T ss_pred ------HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh--hHHHHHHHHHHHH
Confidence 44888999999999999999999999999999999999999999999999999997666 5999999999999
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHH--HHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLC--GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF 245 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~--~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~ 245 (534)
|+.+|..+|.+...++.|++++|||+..+++ .+.++|+.+.+++. +++..+.+||..|++.++++++..++.++..+
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999955 79999999999998 88888889999999999999999999999999
Q ss_pred CCCCCCcccchhhhhhhhhcc-CccccC--CCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136 246 DAPLKHPRITRKELDYIQENI-EPTIVG--SKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI 322 (534)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 322 (534)
|+|++....+.+|.+....+. ++++++ ....+.-++.+++||.+|.+++..++.+..-+++..|.|.|+.|..|+|.
T Consensus 208 d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~ 287 (448)
T COG2271 208 DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL 287 (448)
T ss_pred CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence 999876544433322111111 111111 01122345668899999999999999999999999999999999999999
Q ss_pred ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHh
Q psy14136 323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-VALVLITWFVAVTLI 401 (534)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 401 (534)
.+++...+++-+++++|.+++||++||+.+.+. .+..++.++...+++..+...+.. .....+.++..++..
T Consensus 288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-------~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~I 360 (448)
T COG2271 288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-------GPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLI 360 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-------chHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999853321 122455555555555555555422 345555555555555
Q ss_pred hhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
....-..-....|..|++ .|++.|+...+.++ |.+.+....|++.|. .||...|++..+.++++.++++...+
T Consensus 361 yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-----~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 361 YGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-----WGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-----CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 444444556677999988 99999999999999 889999999999999 89999999988888887777666544
Q ss_pred C
Q psy14136 480 S 480 (534)
Q Consensus 480 ~ 480 (534)
.
T Consensus 436 ~ 436 (448)
T COG2271 436 A 436 (448)
T ss_pred h
Confidence 3
No 2
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.3e-42 Score=359.62 Aligned_cols=446 Identities=30% Similarity=0.528 Sum_probs=342.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136 9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE 88 (534)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (534)
....+.||.+..++++++.++|.||.+++++.++|.++. ++....|.+...+.++
T Consensus 11 ~~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~--------~~~~~~~~~~~~~~~~----------------- 65 (465)
T TIGR00894 11 PYFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKE--------NSTDLACLSAENELDN----------------- 65 (465)
T ss_pred CcccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCC--------CCCCcccccccccccc-----------------
Confidence 346678899999999999999999999999999995531 1111222221111100
Q ss_pred CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQ 168 (534)
Q Consensus 89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~ 168 (534)
..+.|++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++...+++.+++.|+++
T Consensus 66 ----~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 141 (465)
T TIGR00894 66 ----IKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQ 141 (465)
T ss_pred ----ccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 0145899999999999999999999999999999999999999999999999999887666545688899999999
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
|++.+...+....++.||+|+++|++++++. .+..+|.++++++++.+.+.+ |||++|++.++++++..++++.+.+|
T Consensus 142 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 142 GLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred HHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999954 789999999999999999884 99999999999888887777777788
Q ss_pred CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136 247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG 326 (534)
Q Consensus 247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 326 (534)
+|+.+++.+++|++..++...+++ +..+.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|.+..+.+
T Consensus 222 ~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g 300 (465)
T TIGR00894 222 DPSIHPCISKFEKKYINSSLQGQK-GSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENG 300 (465)
T ss_pred CcccCCCCCHHHHHHHHhhccccc-CCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhH
Confidence 776655444444444333222111 1122345689999999999999999999999999999999999998999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA 406 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (534)
++.++..++.+++.++.|+++||+++|+.......++....++..+..+..+.......+....+..+.+.+++.+...+
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 380 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLA 380 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999988766543333333333333333333322333222333344444444444444455
Q ss_pred ccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCC
Q psy14136 407 GAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWN 486 (534)
Q Consensus 407 ~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (534)
.......+..|+.+|.+.|+.+..+.+++.++|.+.|.+.+. .+..+|..+|++.+++.+++.++.....+.++++++
T Consensus 381 ~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~--~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 381 GVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQ--DSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred hhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCC--CCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 555566688888899999999999999999999999999876 211468999999998888888777666655555554
No 3
>KOG2532|consensus
Probab=100.00 E-value=5.4e-43 Score=352.92 Aligned_cols=389 Identities=37% Similarity=0.727 Sum_probs=354.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
+.++++|+.+.|++.+.+++|+.+++++.|+++||+|.|+++..+.++.++++++++++...+++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34899999999999999999999999999999999999999999999999999999999878888999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
.+|+...+.++|.|++||++..+ ++++..+|.+++.+++|++.+. +||+.+|++.++++++..++++++..|+|++++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 99999999999999999999999 6678889999999999999999 999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
..+++|++.+++...+++.+++ .+.+|+++++++.+|..++..++.+++.+.+..|+|.|+++++|++..+.|++.++.
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466)
T ss_pred CCCHHHHHHHHhcccccccCCC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence 9999999998887666554433 678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchh-HHHHHHHHHHHHhhhcccccchh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVA-LVLITWFVAVTLITASYAGAMAN 411 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
.+...+..+++|.++||+.+| .+.....||.+..++....+++++.+.+.+.... ..++.+.+.....|...+..+..
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~ 382 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN 382 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh
Confidence 999999999999999999998 8888899999999999999999999998875333 55555566566677777777777
Q ss_pred hhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCC
Q psy14136 412 VVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ 487 (534)
Q Consensus 412 ~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (534)
..+..|++.+..+|+.+.+..+.++++|.+.|.+... + ....|+.+|++.+++.+++.+.+.++.+.+++++.+
T Consensus 383 ~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~-t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~ 456 (466)
T KOG2532|consen 383 HQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD-N-TREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTK 456 (466)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC-C-CHHHHHHHHHHHHHHHHHhchheeEeecCcccCccC
Confidence 7777999999999999999999999999999999953 2 347999999999999999998888887777777765
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.9e-40 Score=343.07 Aligned_cols=401 Identities=17% Similarity=0.195 Sum_probs=299.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136 15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE 94 (534)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 94 (534)
++.++.+++++|+..|+||..++.+.|.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i--------------------------------------------------- 55 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDM--------------------------------------------------- 55 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHH---------------------------------------------------
Confidence 55667778999999999999999999988
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA---AVLHYGALIALRSIQGIA 171 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~~~~~~~l~~~r~l~G~g 171 (534)
++|+|++..+.|++.+++.+++++++++.|+++||+|||+++..++++++++.++.++. .+++++.+++.|+++|++
T Consensus 56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 135 (467)
T PRK09556 56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF 135 (467)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 55999999999999999999999999999999999999999999999988887775542 236899999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc---CCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY---GWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~---gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
.+...|...+++++|+|+++|+++++++ .+.++|.++++++..++.+.+ +||..|.+.++++++..++.+++.++.
T Consensus 136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999955 788999999998887776653 699999988888887777777777777
Q ss_pred CCCCcccchhhhhhhhhccC-ccccC-CCC-C-ccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136 248 PLKHPRITRKELDYIQENIE-PTIVG-SKG-L-KVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI 322 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 322 (534)
|++.+..++++. ..+... +++.. .++ . ... .+..+++|.+|...+..++......++..|.|.|+++.+|++.
T Consensus 216 p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~ 293 (467)
T PRK09556 216 PEELGWGKAEEI--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSK 293 (467)
T ss_pred hhhcCCCChhhc--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCH
Confidence 765433322221 000000 00000 000 0 011 2337899999999999999888888899999999998899999
Q ss_pred ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136 323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLIT 402 (534)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (534)
.+++...+...++.+++.++.|+++||+++|+.+. ...........+..+.... +.....+..+..+++..
T Consensus 294 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~ 364 (467)
T PRK09556 294 EDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV--------ACIALALIIFTLGVYQHAT-SEYMYLASLFALGFLVF 364 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH--------HHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999886531 1111111111112222222 33333333333332222
Q ss_pred hcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccc-cc------cChhhHHHHHHHHHHHHHHHHHH
Q psy14136 403 ASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQD-DE------TSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 403 ~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~-~~------~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
...........|..|++ +|++.|+.+...++ |++++|.+.|++.|. .. ....+|+..|++.+++.+++.+.
T Consensus 365 ~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 444 (467)
T PRK09556 365 GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICL 444 (467)
T ss_pred hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHH
Confidence 22222234556888876 99999999999997 779999999999991 00 00157999999998888887777
Q ss_pred HHhh
Q psy14136 474 YQVL 477 (534)
Q Consensus 474 ~~~~ 477 (534)
.+.+
T Consensus 445 ~~~~ 448 (467)
T PRK09556 445 MAIV 448 (467)
T ss_pred HHHH
Confidence 6655
No 5
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=313.36 Aligned_cols=350 Identities=18% Similarity=0.276 Sum_probs=300.2
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|+|+|..+.|++.|.|.+++++++|+...+.||+.||++++..+.++.++.++++++ +||+.++++|++.|+..|.
T Consensus 40 A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA--p~f~~Ll~aR~~~g~a~G~ 117 (394)
T COG2814 40 AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA--PSFAVLLLARALAGLAHGV 117 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999998777 7999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
+++...++..+..|+++|+++++ +..+..++.++|.+++.++.+.+|||.+|++.+.++++..+..+..+| |++.+.
T Consensus 118 f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~ 195 (394)
T COG2814 118 FWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISG 195 (394)
T ss_pred HHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCC
Confidence 99999999999999999999999 778999999999999999999999999999999999999998888888 222111
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
.. +....+..+++|+|+++...+..++...+.+...+|+.+++++..|++....+++...++
T Consensus 196 ~~------------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~G 257 (394)
T COG2814 196 SL------------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFG 257 (394)
T ss_pred CC------------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHH
Confidence 10 111223467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
+++++|..+.|++.|| +.++.+ .....+..+.++.+.+...+.+......++.++..............
T Consensus 258 v~~~~Gn~~gGrl~dr-~~~~~l----------~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a 326 (394)
T COG2814 258 IAGFIGNLLGGRLADR-GPRRAL----------IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLA 326 (394)
T ss_pred HHHHHHHHHHhhhccc-cchhHH----------HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhc
Confidence 9999999999999999 665542 44445555556666666545555555555555555554555555566
Q ss_pred ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
+..|+++..+.++.....++|..+|..++|.+.|. .++....++.+++.+++.++.+...+.++
T Consensus 327 ~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-----~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 327 RLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-----LGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66778899999999999999999999999999999 89999999999999888888776655443
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3e-39 Score=328.30 Aligned_cols=386 Identities=20% Similarity=0.245 Sum_probs=290.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136 14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN 93 (534)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 93 (534)
.||.+..+++++|+++++||.+++.+.|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l-------------------------------------------------- 34 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTM-------------------------------------------------- 34 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhh--------------------------------------------------
Confidence 467777788999999999999999999887
Q ss_pred CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++|+|++..+.|++.+++.+++++++++.|+++||+|||+++..+++++++++++++++ ++++.+++.|+++|++.+
T Consensus 35 -~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~ 111 (412)
T TIGR02332 35 -GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA--TGPESLYLLRILVGIAEA 111 (412)
T ss_pred -HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999999999999999999999999999999997665 689999999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh------hcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA------HYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~------~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
...|...+++.|++|+++|+++++++ .+.++|.++++++++++.+ ..|||+.|++.++++++..++.++++||
T Consensus 112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999955 7889999999999988864 3699999999988888877777778899
Q ss_pred CCCCCcccchhhhhhhhhccC-------ccccC-CCC---CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136 247 APLKHPRITRKELDYIQENIE-------PTIVG-SKG---LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMK 315 (534)
Q Consensus 247 ~p~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (534)
+|++.+...+++++...+..+ ..+.. .+. ....+++++ +|.+|...+..++.....+.+.+|+|.|++
T Consensus 192 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 270 (412)
T TIGR02332 192 SPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQ 270 (412)
T ss_pred CcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887644322222221111100 00000 000 012244444 588888888888888889999999999998
Q ss_pred hh-hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q psy14136 316 TI-LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW 394 (534)
Q Consensus 316 ~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (534)
+. .|.+..+++.+.....++.+++.++.|+++||+++|+.. ......+..+.+.+..... +........
T Consensus 271 ~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 340 (412)
T TIGR02332 271 SFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH---------TALPYLFAAAGWLLASATD-HNLIQLLGI 340 (412)
T ss_pred hcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH---------HHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence 72 367778889899999999999999999999999876531 1122222222222222222 222222222
Q ss_pred HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHH
Q psy14136 395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG 467 (534)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~ 467 (534)
+...++.....+.......+..|++ |++++|+.+...++|++++|.+.|.+.|. . ++|+..+++.+++.
T Consensus 341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~--~--g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 341 IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA--T--GSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc--C--CCCchhHHHHHHHH
Confidence 2222222222222334445666654 99999999999999999999999999997 1 35888888766644
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.6e-38 Score=323.99 Aligned_cols=401 Identities=17% Similarity=0.232 Sum_probs=295.8
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
.+|+.++...+++++..++++..++..+|.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 49 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEM------------------------------------------------- 49 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHH-------------------------------------------------
Confidence 3566777778899999999999999999888
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
.+++|+|+.+.|++.+.+.+++++++++.|+++||+|||+++.++.++.+++.++++++ ++++.+++.|++.|++.
T Consensus 50 --~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~ 125 (434)
T PRK11663 50 --LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS--SSLWAFALLWVLNAFFQ 125 (434)
T ss_pred --HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999886655 68999999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
|...+...+++.+++|+++|++++++ ..+.++|..+++++++++.+.+|||+.|++.+++.++..+..++.+||+|++.
T Consensus 126 g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~ 205 (434)
T PRK11663 126 GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAM 205 (434)
T ss_pred HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhc
Confidence 99999999999999999999999995 57889999999999999999999999999988877766655566667766432
Q ss_pred cccchhhhhhhhhccCccccCCCCCccc-H-HHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136 252 PRITRKELDYIQENIEPTIVGSKGLKVP-W-VSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT 329 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 329 (534)
...+.++.+...++..++..+.+..... + ...+++|.+|.+.+..++.......+..|+|.|+.+.+|++..+++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~ 285 (434)
T PRK11663 206 GLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAV 285 (434)
T ss_pred CCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 1111000000000000000000001111 1 2367789999888888888888888889999999877899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh--cccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 330 GAPFLCSYLSSVLFCYLADQLFVR--NIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 330 ~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
+...+++++++++.|++.||+.++ +.. .....++..+....+..+. .. +........+..+++.......
T Consensus 286 ~~~~~~~~~g~~~~g~l~dr~~~~~r~~~------~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~~~~~~~~~ 357 (434)
T PRK11663 286 SMFELGGFIGALVAGWGSDKLFNGNRGPM------NLIFAAGILLSVGSLWLMP-FA-SYVMQAACFFTIGFFVFGPQML 357 (434)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCCccHH------HHHHHHHHHHHHHHHHHcc-cc-cHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999433 221 0111122222222222111 11 2222222222222211111112
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
......|..|++ +|++.|+.++..++|++++|.+.|++.|. .+|+..|++.+++.+++++..+...+
T Consensus 358 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 358 IGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI-----WHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 234556777654 99999999999999999999999999998 78999999998888877766554443
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=9.6e-38 Score=315.85 Aligned_cols=346 Identities=14% Similarity=0.128 Sum_probs=278.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++++++++++ ++++.++++|+++|++.+.
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~~G~~~~~ 113 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA--WNFTVLLISRIGIAFAHAI 113 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999999999999987665 6999999999999999998
Q ss_pred hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|++++++ ..+.++|..+++++++.+.+++|||+.|++.++++++..+..+...|+.|++++
T Consensus 114 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~- 192 (390)
T PRK03545 114 FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS- 192 (390)
T ss_pred HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc-
Confidence 999999999999999999999995 478899999999999999999999999999998887776666655555432110
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+ ...+.++++|+|.++...+..++..........+.+.++++..|.+..+++.+.....
T Consensus 193 ---~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 193 ---G------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFG 251 (390)
T ss_pred ---c------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 0 0113467888898887766666666666666778888888878999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
++.++++++.+++.||+++|.. ..+..+.......+.....+.+......++.+.+.....+.....+.
T Consensus 252 ~~~~~g~~~~g~l~dr~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 320 (390)
T PRK03545 252 GAGIIGSVLFSRLGNRHPSGFL-----------LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVL 320 (390)
T ss_pred HHHHHHHHHHHHHhhccchhHH-----------HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 9999999999999999987643 22333333333222222224444444555555555544455566677
Q ss_pred ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
+..|+++++++|+.+...++|..+||.+.|.+.|. .+++..|++.+.+.+++++......++
T Consensus 321 ~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 321 KLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLH-----LGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 77888899999999999999999999999999999 899999999998888888777666543
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.2e-36 Score=308.13 Aligned_cols=371 Identities=22% Similarity=0.339 Sum_probs=285.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+++.+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++ ++++.++++|++.|++.+.
T Consensus 21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~ 98 (399)
T TIGR00893 21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--GAYVSLYILRVLLGAAEAP 98 (399)
T ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHh
Confidence 55899999999999999999999999999999999999999999999999999886555 5899999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|+++++ .....++|.++++.+++.+.+..+||+.|++.+++.++..++.++..||+|++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (399)
T TIGR00893 99 FFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKW 178 (399)
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcccc
Confidence 99999999999999999999999 45788999999999999999999999999999888888777777677776654433
Q ss_pred cchhhhhhhhhccC---ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136 254 ITRKELDYIQENIE---PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330 (534)
Q Consensus 254 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 330 (534)
.++++++...+... +.+.+.+..+...++.+++|+++...+..++.......+..+.|.|+++.+|.+..+.+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (399)
T TIGR00893 179 LTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMAS 258 (399)
T ss_pred CCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHH
Confidence 22222221111100 011112233445778899999999999999999999999999999999889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMA 410 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
...++.+++.++.|++.||+++|+..... .......+..+..+........+ ..+.......+.+++.+ ..+....
T Consensus 259 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 334 (399)
T TIGR00893 259 LPGIVGFIGMILGGRLSDLLLRRGKSLVF--ARKTAIIAGLVLSLLMFATNYVN-IPYAALALVALGFFGLG-AGAIGWA 334 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchhH--HHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHhchh-hhhHHHH
Confidence 99999999999999999999998622100 00001111111111111111111 22333333333333333 5677778
Q ss_pred hhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHHHHHHHHHh
Q psy14136 411 NVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 411 ~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~ 476 (534)
+..|..|++ |+++.|+.+.+..+|..++|.+.|.+.|. .+ |...|++.+++.+++.+..+.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 335 LISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT-----TGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-----CCchhHHHHHHHHHHHHHHHHHHH
Confidence 888988866 99999999999999999999999999998 56 888998888877776665543
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.3e-36 Score=315.97 Aligned_cols=394 Identities=16% Similarity=0.161 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCC
Q psy14136 16 VVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEE 95 (534)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 95 (534)
+......+++.++.++|...++...|.+.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~-------------------------------------------------- 44 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGK-------------------------------------------------- 44 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 345566788999999999999999988733
Q ss_pred ccccCChh----hHHH--HHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------HH
Q psy14136 96 GEFDWDTT----TQGA--ILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------AL 161 (534)
Q Consensus 96 ~~~~~s~~----~~g~--~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~l 161 (534)
+++.+.+ .++. +.++.++++.+++++.|+++||+|||+++.++++++++++++++++ +++. .+
T Consensus 45 -~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~--~~~~~~g~~a~~~l 121 (490)
T PRK10642 45 -VFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI--PSYATIGIWAPILL 121 (490)
T ss_pred -hhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHH
Confidence 4432221 1222 2578889999999999999999999999999999999999998776 5665 38
Q ss_pred HHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchh
Q psy14136 162 IALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSL 232 (534)
Q Consensus 162 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~ 232 (534)
+++|+++|++.|..++...+++.|++|+++|+++.++ ..+..+|..+++.+...+. ..+|||++|++.+++
T Consensus 122 ~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~ 201 (490)
T PRK10642 122 LLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPL 201 (490)
T ss_pred HHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999884 4667777777776554433 257999999997665
Q ss_pred hHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcC-HHHHH-HHHHHHHHHHHHHHHHhch
Q psy14136 233 GAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTS-PPAWA-IGITTFGRIWVHYIFIIPG 310 (534)
Q Consensus 233 ~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 310 (534)
+++ .++....+||+|+.....++.+.+ .+ +. ..+..+.++++++++ ++.+. .....++....++.+..|+
T Consensus 202 ~l~-~~~~~~~~~esp~~~~~~~~~~~~--~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (490)
T PRK10642 202 GII-GLYLRHALEETPAFQQHVDKLEQG--DR---EG--LQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYM 273 (490)
T ss_pred HHH-HHHHHHcCCCChhHHHHHHhhhhh--cc---cc--ccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 333445567766532111000000 00 00 001123356666653 33332 3333345567778888999
Q ss_pred hhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH-HHHHHHHHhh-cCCchh
Q psy14136 311 PRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI-PALLVMLIGY-LGCNVA 388 (534)
Q Consensus 311 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 388 (534)
|.|+++.+|++..+.++......++.+++.++.|+++||+|||+.+ ..+.++ ....+..+.. ...+..
T Consensus 274 p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 274 PSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHH
Confidence 9999887899888777777777888999999999999999998753 222221 1111111111 121333
Q ss_pred HHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHH
Q psy14136 389 LVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG 467 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~ 467 (534)
......++.+++.+...+.......+.+|++ |+++.|+.+....+++.++|.+.+++.+. . .+|...++...+..
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--~--~~~~~~~~~~~~~~ 419 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--T--QNLMMPAYYLMVVA 419 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHH
Confidence 3334444444444444455566667888877 99999987776778888999999998876 1 23555555555566
Q ss_pred HHHHHHHHhhcCCcccc
Q psy14136 468 SCTYFFYQVLGTSEVQP 484 (534)
Q Consensus 468 ~~~~~~~~~~~~~~~~~ 484 (534)
+++++..+++++++++.
T Consensus 420 ~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 420 VIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHhccccCCC
Confidence 66666666667665543
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.5e-36 Score=309.05 Aligned_cols=384 Identities=19% Similarity=0.165 Sum_probs=296.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136 10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK 89 (534)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (534)
++.+++|.+..++++..++.++|+..++...|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 41 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRM---------------------------------------------- 41 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 5666889999999999999999999999999888
Q ss_pred CCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 90 PNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQG 169 (534)
Q Consensus 90 P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G 169 (534)
.+++|+|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|
T Consensus 42 -----~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G 114 (406)
T PRK11551 42 -----AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA--WDFPSLLVARLLTG 114 (406)
T ss_pred -----HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 44899999999999999999999999999999999999999999999999988886554 68999999999999
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
++.+...+...+++.|++|+++|+++++ .+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++..+++||+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 115 VGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999 557889999999999988888899999999988776766666666677765
Q ss_pred CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc---CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccc
Q psy14136 249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT---SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTN 325 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~ 325 (534)
+..+..++++ ..+...+..++ .+..+...+..++.....+....|.|.|+++ .|++..+.
T Consensus 195 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~ 257 (406)
T PRK11551 195 AFAQAAGAGK----------------QRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQA 257 (406)
T ss_pred hHHhccCcch----------------hhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhh
Confidence 4321110000 00001111222 2333444444555555666777889999987 79999999
Q ss_pred hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136 326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASY 405 (534)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (534)
+.+.....++.+++.++.|++.||+++|+.+ ..+.+...+.++.+...+ +.+...+..++.+++.+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 326 (406)
T PRK11551 258 GLVQIAFNIGGALGSLLIGALMDRLRPRRVV----------LLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQ 326 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999999988653 233333344444444444 44444444444555555556
Q ss_pred cccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 406 AGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 406 ~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
+.......+..|++ |+++.|+.+....+|..++|.+.|.+.+. . .++...++..+.+.+++.++.+...
T Consensus 327 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 327 SVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL--G--RSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc--C--CchHHHHHHHHHHHHHHHHHHHHHh
Confidence 66677788888866 99999999999999999999999999887 1 4566677766666666665555443
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.7e-36 Score=310.71 Aligned_cols=407 Identities=15% Similarity=0.200 Sum_probs=289.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136 14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN 93 (534)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 93 (534)
++|.++...++.+...++++..++..+|.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-------------------------------------------------- 55 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYL-------------------------------------------------- 55 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHH--------------------------------------------------
Confidence 456666667788999999999898888877
Q ss_pred CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhh
Q psy14136 94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIA 171 (534)
Q Consensus 94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g 171 (534)
.++ |+|+.+.|++.+.+.+++++++++.|+++||+|||++++++.++.+++.+++++.. +.+++.+++.|++.|++
T Consensus 56 -~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~ 133 (452)
T PRK11273 56 -VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF 133 (452)
T ss_pred -HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHH
Confidence 336 99999999999999999999999999999999999999999999999988866542 13678889999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHH-hhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIG-LTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~-~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
.+...+.....+.+++|+++|+++++++ .+.++|.. .+++++..+....|||+.|++.+++.++..++.++++||+|+
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 9999998889999999999999999954 67777764 455544344344589999999988888877777777788766
Q ss_pred CCcccchhhhhh-hhhccCccccCCCCCccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 250 KHPRITRKELDY-IQENIEPTIVGSKGLKVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
+....++++.+. ..+....++.++.+.+.. .+.++|+|.+|...+..++.+...+.+..|+|.|+++..|++..+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~ 293 (452)
T PRK11273 214 SCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW 293 (452)
T ss_pred hcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 432221111110 000000000000011111 234678999999988888888888888999999999888999889998
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYA 406 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 406 (534)
+..+..++.+++.++.|+++||+++++.. ........+..+.+..+... ..+........+..+........
T Consensus 294 ~~~~~~~~~~~g~~~~G~l~dr~~~~r~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 366 (452)
T PRK11273 294 AYFLYEYAGIPGTLLCGWMSDKVFRGNRG-------ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVM 366 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcc-------hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHH
Confidence 88888899999999999999999543221 00111122222222222121 11222222222222222211122
Q ss_pred ccchhhhccCCCc-hhHHHHHHhHHHHhhhhH-HhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q psy14136 407 GAMANVVDIGPNF-AGPILAFAQTIHMTASFL-SPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484 (534)
Q Consensus 407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 484 (534)
.......|..|++ +|+++|+.+...++|+.+ +|.+.|++.|. .+|+..|++.+++++++++....+.+.++|+
T Consensus 367 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 367 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 2234456777765 999999999999998765 79999999999 7899999998888888877777665554443
No 13
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3.1e-36 Score=311.42 Aligned_cols=394 Identities=14% Similarity=0.114 Sum_probs=286.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136 15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE 94 (534)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 94 (534)
++..+...+..++..+.+...++..+|.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------------------------------------------- 62 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPII--------------------------------------------------- 62 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence 34455556777888888877777666666
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++ ++++.+++.|++.|++.+.
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~s~~~l~~~r~l~G~~~~~ 140 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--SSATGFIAVRFFIGFSLAT 140 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHh
Confidence 55999999999999999999999999999999999999999999999999998886555 5889999999999999886
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh----h-----hcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI----A-----HYGWRSVFYTTGSLGAIWCVAWWFLA 244 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~----~-----~~gwr~~f~i~~~~~li~~i~~~~~~ 244 (534)
. +....++++++|+++|++++++. ...++|..+++.+.+.+. + ..|||+.|++.++++++..++.+++.
T Consensus 141 ~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 141 F-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred h-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 45667899999999999999954 556667766665554432 2 25899999999998888777666665
Q ss_pred cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT 324 (534)
Q Consensus 245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 324 (534)
++.|+... ++.+ +. .+.++.+....+++.++++++|.+.+..++.......+..++|.|+.+.+|++..+
T Consensus 220 ~~~p~~~~----~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 289 (476)
T PLN00028 220 QDLPDGNY----RELK---KS---GTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLET 289 (476)
T ss_pred CcCCCCch----hhHH---hc---CccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHH
Confidence 55543321 0100 00 00000111224566788899988888777776667778889999998878999999
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
++.+.++..++.++++++.|+++||+++|+..+. |+....+...+.++.++.+.... +.......+++.+++.+..
T Consensus 290 a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~---r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 365 (476)
T PLN00028 290 AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG---RLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMILFSIFVQAA 365 (476)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998753211 23333344444444334443333 3333344444444544445
Q ss_pred ccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 405 YAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
.+.......+..|+++|++.|+.+..+++|+.++|.+.+ ..+. .+|+.+|++.+++.+++.++.++.+....
T Consensus 366 ~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~-----~~y~~~f~~~~~~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 366 CGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSS-----YSTETGISLMGVMIIACTLPVAFIHFPQW 437 (476)
T ss_pred hhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCC-----ccHhhHHHHHHHHHHHHHHHHHheeccch
Confidence 555666667777888999999998877777777777654 1122 57999999999888888888777654443
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.2e-36 Score=317.39 Aligned_cols=401 Identities=13% Similarity=0.135 Sum_probs=299.2
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136 12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN 91 (534)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 91 (534)
.+++|.+++++.++++...+|...++.++|.+
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i------------------------------------------------ 193 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSA------------------------------------------------ 193 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------
Confidence 35677777888889999999999999888877
Q ss_pred CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136 92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA 171 (534)
Q Consensus 92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g 171 (534)
+++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++.++++++++++ ++++.++++|++.|++
T Consensus 194 ---~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa--~s~~~llv~R~l~G~g 268 (742)
T TIGR01299 194 ---EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV--QGYGFFLFCRLLSGFG 268 (742)
T ss_pred ---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999887655 6899999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-------------cCCchhhhhhchhhHHHH
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-------------YGWRSVFYTTGSLGAIWC 237 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-------------~gwr~~f~i~~~~~li~~ 237 (534)
.|+..+...+++.|++|+++|++.++ +..+..+|.++++.++..+... .+||+.|++.++++++.
T Consensus 269 ~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~- 347 (742)
T TIGR01299 269 IGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA- 347 (742)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999 5578889999998887666543 35899888877765554
Q ss_pred HHhhhhccCCCCCCcccc-hhhhh----hhhhc--------------------cCcc-----ccCCCCC-----------
Q psy14136 238 VAWWFLAFDAPLKHPRIT-RKELD----YIQEN--------------------IEPT-----IVGSKGL----------- 276 (534)
Q Consensus 238 i~~~~~~~~~p~~~~~~~-~~~~~----~~~~~--------------------~~~~-----~~~~~~~----------- 276 (534)
++.++++||+|+...... .++.. ++... .... +.+....
T Consensus 348 ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (742)
T TIGR01299 348 IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSE 427 (742)
T ss_pred HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhh
Confidence 455667899986421110 00000 00000 0000 0000000
Q ss_pred ----cccHHHhhcC---HHHHHHHHHHHHHHHHHHHHHhchhhhhHhh----h-----------------CCccc-----
Q psy14136 277 ----KVPWVSILTS---PPAWAIGITTFGRIWVHYIFIIPGPRYMKTI----L-----------------GFSIQ----- 323 (534)
Q Consensus 277 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-----------------g~s~~----- 323 (534)
...++++++. ++.+.+++.+++..++++++..|+|.++.+. + +++..
T Consensus 428 ~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (742)
T TIGR01299 428 GGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHR 507 (742)
T ss_pred hhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhcc
Confidence 0123445543 3567888888999999999999999886541 0 00000
Q ss_pred --------------------------------------------------------------------------------
Q psy14136 324 -------------------------------------------------------------------------------- 323 (534)
Q Consensus 324 -------------------------------------------------------------------------------- 323 (534)
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 587 (742)
T TIGR01299 508 GGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDF 587 (742)
T ss_pred ccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccC
Confidence
Q ss_pred --------cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q psy14136 324 --------TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWF 395 (534)
Q Consensus 324 --------~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (534)
.......+..++.+++.++.|+++||+|||+.+ .+++++.+++.+++.+.+ +....++..+
T Consensus 588 ~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~-s~~~ll~~~~ 656 (742)
T TIGR01299 588 DGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGN-SESAMIALLC 656 (742)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHc-cHHHHHHHHH
Confidence 012334566688999999999999999998763 566666666666666655 4444444445
Q ss_pred HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
+.+++.+..++....++.|++|.+ |++++|+.++...+|++++|++.|.+.+. +...+|++.+++.++++++.
T Consensus 657 l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------~~~~pf~i~a~~lll~~ll~ 730 (742)
T TIGR01299 657 LFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------TKAAPILFASAALACGGLLA 730 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHH
Confidence 556666667777888999999977 99999999999999999999999988766 35567888877777777777
Q ss_pred HhhcCCccc
Q psy14136 475 QVLGTSEVQ 483 (534)
Q Consensus 475 ~~~~~~~~~ 483 (534)
+++++++.+
T Consensus 731 ~~LPET~~~ 739 (742)
T TIGR01299 731 LKLPDTRGQ 739 (742)
T ss_pred HhCCCCccc
Confidence 777765543
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.2e-36 Score=297.87 Aligned_cols=349 Identities=12% Similarity=0.075 Sum_probs=257.9
Q ss_pred CCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 89 KPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSI 167 (534)
Q Consensus 89 ~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l 167 (534)
.|.+|. ++|+|+|+.+.|++.+.+.+++++++++.|+++||+|||+++..+++....+. ++ ....++++.++++|++
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~R~l 88 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GR-LLDPFNYEWLLACQLL 88 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HH-HHHhccHHHHHHHHHH
Confidence 344444 77999999999999999999999999999999999999987765555544443 22 2222589999999999
Q ss_pred HhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 168 QGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
+|++.+. .+.....++|++|+++|+++++ ...+..+|.++++++++++.+++|||+.|++.++++++..++.++.+||
T Consensus 89 ~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 89 AALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999985 5666677799999999999999 5578999999999999999999999999999999888888888888898
Q ss_pred CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136 247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG 326 (534)
Q Consensus 247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 326 (534)
+|+++++..+. + +...++++++++|.+|.+.+..++.....+++.+|+|.|+++ .|++.. .+
T Consensus 168 ~p~~~~~~~~~--~--------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~ 229 (368)
T TIGR00903 168 LPFQAAEGFGF--K--------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AG 229 (368)
T ss_pred CCCCCCCCcch--H--------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HH
Confidence 77543211000 0 001246789999999999999999999999999999999987 678764 55
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA 406 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (534)
....+..+.+.++ .+++.||..|++. |+........+.++.+..+.... +....+....+.+++.....+
T Consensus 230 ~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~ 299 (368)
T TIGR00903 230 DAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFEL-NRLALFAFIGIAGLLMLPAYA 299 (368)
T ss_pred HHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHhhhhhHH
Confidence 5555555544444 5788888876532 11112222233333333434333 333334444445555555556
Q ss_pred ccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 407 GAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
..+.+..|.+|++ ||++.|+.+..+++++..+|.+.+.+.. +....|.+.++..+++.+..+
T Consensus 300 ~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-------~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 300 IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-------SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999986 9999999999999999999999887763 345566666776666666654
No 16
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2.4e-36 Score=310.68 Aligned_cols=393 Identities=14% Similarity=0.155 Sum_probs=292.1
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
.++|.++..++++....+.++..++..++.+
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i------------------------------------------------- 45 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKEL------------------------------------------------- 45 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHH-------------------------------------------------
Confidence 5678888888888888888888888888877
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIA-LRSIQGIA 171 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~-~r~l~G~g 171 (534)
++++|++.++.+++.+.+.++..++.++.|+++||+|||++++.++++.+++.++++++ ++++.+++ .|++.|++
T Consensus 46 --~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~l~G~~ 121 (455)
T TIGR00892 46 --QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS--SNVIELYLTAGFITGLG 121 (455)
T ss_pred --HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhc
Confidence 55999999999999999999999999999999999999999999999999999887665 57877764 57999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
.+...+...+++.++++ ++|+++.+ ...+..+|..+++++++.+.+.+|||++|++.+++.++..+..++..++.+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~ 200 (455)
T TIGR00892 122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ 200 (455)
T ss_pred chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 99877888889999995 78999999 45788999999999999999999999999999988777665555444432211
Q ss_pred CcccchhhhhhhhhccCcc-cc-CCCC--CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136 251 HPRITRKELDYIQENIEPT-IV-GSKG--LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG 326 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 326 (534)
+....+++.....+...++ .. ...+ .+....+++++|.++...+..++..........++|.|+++ .|++..+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g 279 (455)
T TIGR00892 201 RVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAA 279 (455)
T ss_pred ccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHH
Confidence 1000000000000000000 00 0000 01111257889999988888887777777888899999987 799999999
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHHh--hhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQLF--VRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
.+.++.+++.++++++.+++.||.. +++. .....+..+.++.++.....+ +.+..++..++.+++.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--------~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 280 FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQ--------YLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCHHHH--------HHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchH
Confidence 9999999999999999999999732 2211 112233333333333333333 5555555566666666676
Q ss_pred ccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 405 YAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
.+.....+.+..|++ ++++.|+.+....+|.+++|.+.|.+.+. . .+|+..|++.+++.+++.+.
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~--~--g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA--T--KNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh--c--CCcchHHHHhhHHHHHHHHH
Confidence 777777777877765 99999999999999999999999999987 1 35888888887776665553
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.4e-35 Score=303.67 Aligned_cols=383 Identities=13% Similarity=0.084 Sum_probs=264.1
Q ss_pred CcC-CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhcccc
Q psy14136 7 RFT-DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTM 85 (534)
Q Consensus 7 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (534)
|.+ ...++|+..++..+++++++++|+..++.+.|.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~---------------------------------------- 50 (432)
T PRK10406 11 KLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAH---------------------------------------- 50 (432)
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 443 344455666767788999999999999999988833
Q ss_pred ccCCCCCCCCccc---cCChhhHHHHH---HHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH-
Q psy14136 86 LLEKPNVNEEGEF---DWDTTTQGAIL---SSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY- 158 (534)
Q Consensus 86 ~~~~P~~~~~~~~---~~s~~~~g~~~---s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~- 158 (534)
++ +.+..+.+... +..+++..++++++|+++||+|||+++.++++++++++++++++ +++
T Consensus 51 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~ 117 (432)
T PRK10406 51 -----------IFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL--PGYE 117 (432)
T ss_pred -----------HhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc--CCch
Confidence 44 34455444444 44555555999999999999999999999999999999997665 344
Q ss_pred -------HHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCC
Q psy14136 159 -------GALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGW 222 (534)
Q Consensus 159 -------~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gw 222 (534)
..++++|+++|++.|..++...+++.|++|+++|+++.++ ..+...|.++++.+...+. ..+||
T Consensus 118 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 197 (432)
T PRK10406 118 TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGW 197 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence 4689999999999999999999999999999999999884 4667777777776654443 25799
Q ss_pred chhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH-HHH
Q psy14136 223 RSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG-RIW 301 (534)
Q Consensus 223 r~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 301 (534)
|++|++.++++++.. .....+||+|+. +.+. +++..++++++++|+.+...+...+ ...
T Consensus 198 r~~F~i~~~~~ll~~-~~~~~~~e~~~~-------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 257 (432)
T PRK10406 198 RIPFALGAVLAVVAL-WLRRQLDETSQQ-------ETRA------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSL 257 (432)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCCCchH-------HHhh------------hcccccHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999998777666542 223334443321 1000 0012357788899888876665554 366
Q ss_pred HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH-HH
Q psy14136 302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM-LI 380 (534)
Q Consensus 302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 380 (534)
.++.+.+|+|.|+++.+|.+..+.+.......++..++.++.|+++||++||+.+ .+..++.++... ..
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~ 327 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM----------LCFGSLAALFTVPIL 327 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHH
Confidence 7788889999999887899988888888888888888999999999999988653 122221111111 11
Q ss_pred --hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccccccChhhH
Q psy14136 381 --GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQDDETSLESW 456 (534)
Q Consensus 381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~ 456 (534)
.....+.........+..+..+...+....+..|.+|++ |+++.|+.+..+++ ++...|.+.+.+ +. . +.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~--~--g~~ 402 (432)
T PRK10406 328 SALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KS--I--GME 402 (432)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HH--h--CCC
Confidence 111112222222222233333333444567788999876 99999999988765 344577777755 44 1 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy14136 457 RQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 457 ~~~f~~~~~~~~~~~~~~~~~ 477 (534)
...+++.+++.+++++..+++
T Consensus 403 ~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 403 TAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHh
Confidence 566666666666666665554
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=9.5e-36 Score=309.76 Aligned_cols=372 Identities=12% Similarity=0.048 Sum_probs=295.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136 14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN 93 (534)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 93 (534)
++|..+..+++++++...|++.++.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i-------------------------------------------------- 32 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTL-------------------------------------------------- 32 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 467778889999999999999999999999
Q ss_pred CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
.+|+|.+.++.+|+.+.|.++++++.+++|+++||+|||++++++.+++++++++++++ +|++.++++|+++|+|.+
T Consensus 33 -~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a--~~~~~li~~r~l~G~g~~ 109 (495)
T PRK14995 33 -SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS--PTASWLIATRALLAIGAA 109 (495)
T ss_pred -HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH
Confidence 55999999999999999999999999999999999999999999999999999998766 699999999999999999
Q ss_pred chhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 174 LTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 174 ~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
...+.....+.+++ |+++|+++++++ ....+|..+||.+++++.+++|||+.|++...++++..++.++++|++++++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~ 189 (495)
T PRK14995 110 MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR 189 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99998888887776 678999999954 7889999999999999999999999999998888887777777777765432
Q ss_pred cccchh-hhh-----------hhhhccCcc----------------------ccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136 252 PRITRK-ELD-----------YIQENIEPT----------------------IVGSKGLKVPWVSILTSPPAWAIGITTF 297 (534)
Q Consensus 252 ~~~~~~-~~~-----------~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (534)
.+..+. ... ...+..... .+...+.+.-..+++|+|.++...+..+
T Consensus 190 ~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~ 269 (495)
T PRK14995 190 DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAM 269 (495)
T ss_pred CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHH
Confidence 211110 000 000000000 0011111222356889999888888888
Q ss_pred HHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH
Q psy14136 298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLV 377 (534)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 377 (534)
+.....++...+.|.|+++.+|+++.+++....+..++..++.++.|++.||+++|+.+ ..+.++..++.
T Consensus 270 ~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~g~~~~~~~~ 339 (495)
T PRK14995 270 TAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA----------TGGMALSALSF 339 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999999987642 34444444444
Q ss_pred HHHhhc--CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 378 MLIGYL--GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 378 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
..+... ..+.+......++.+++.+...+.......+..|++ ++.+.++.++...+|+.+|+.+.|.+.+.
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 340 YGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333222 223444455666677777777776777777766655 99999999999999999999999988765
No 19
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.9e-35 Score=297.90 Aligned_cols=380 Identities=14% Similarity=0.145 Sum_probs=293.8
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
++|+.+...+++++++...+...++..+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i------------------------------------------------- 33 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPI------------------------------------------------- 33 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHH-------------------------------------------------
Confidence 4556666677889999999999999999888
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
++++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++.
T Consensus 34 --~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~~l~G~~~ 109 (394)
T PRK03699 34 --AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS--HSLALFSIAMFVLGVVS 109 (394)
T ss_pred --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHHHHHhh
Confidence 55899999999999999999999999999999999999999999999999999887655 68999999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-hcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
+...+...+++.|++|+++|+++++ ......+|..++|.+.+.+.. ..|||+.|++.+++.++..++.++ ++.|+.
T Consensus 110 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~ 187 (394)
T PRK03699 110 GITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPAL 187 (394)
T ss_pred HhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccc
Confidence 9999999999999999999999999 457788888999988887764 579999999888777665544332 222221
Q ss_pred CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136 251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 330 (534)
.++.+ ++ + .+.. ++ ..++.++...+..++.....+.+..|+|.|+++.+|+++.+.+.+.+
T Consensus 188 ~~~~~-~~----------~---~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 248 (394)
T PRK03699 188 GKHAP-KA----------D---KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVS 248 (394)
T ss_pred cccCc-cc----------c---Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence 11000 00 0 0000 01 12466777777777777778888899999998889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMA 410 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
...++..+++++.+++.||+++|+.+ .....+..+.+.++...+ +........+..+++.+..++....
T Consensus 249 ~~~~~~~ig~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~ 317 (394)
T PRK03699 249 NFWMAYMVGMWIFSFIVRFFDLQRIL----------TVLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIIT 317 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhchhhHH----------HHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998753 223333333334443333 4444444455555555666666666
Q ss_pred hhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 411 NVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 411 ~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
...+..|+++++..|......++|..++|.+.|++.+. .+++..++..+++.+++.+..+...+..|
T Consensus 318 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (394)
T PRK03699 318 LGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAH-----FGLQAALLTANGLYAVVFVMCILLGFVSK 384 (394)
T ss_pred HHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----hCchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 66677777777888999999999999999999999998 78889998888888777666655554433
No 20
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=280.72 Aligned_cols=384 Identities=18% Similarity=0.198 Sum_probs=327.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
+.+...+.+.++++.+.|+-...+++..+.|
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i------------------------------------------------- 40 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFI------------------------------------------------- 40 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------------------------------------
Confidence 4445566678899999999999999999888
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV-LHYGALIALRSIQGIA 171 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~-~~~~~l~~~r~l~G~g 171 (534)
++|+|+|+.|.+++.++..+..++..++.|.+.||||.|++..+++++..+.++..+++.. ++++.+++++++.|++
T Consensus 41 --~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~ 118 (417)
T COG2223 41 --KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA 118 (417)
T ss_pred --ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc
Confidence 5699999999999999999999999999999999999999999999999999999777742 2456999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcC---CchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYG---WRSVFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
|....+...+++.|+||+++|.++|++...|+|..+...++..+....| ||....+..+..++..+..++...|.|
T Consensus 119 -GasFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 119 -GASFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred -cceehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 5578999999999999999999999888999999999999999988888 999999999888888888888888877
Q ss_pred CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136 249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLL 328 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 328 (534)
+.++..++.+ +..++.++++++.|.+++.++..+.++.++..++|.|+++++|.++.+++.+
T Consensus 198 ~~r~~~~~~~------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~ 259 (417)
T COG2223 198 EHRASVKPQL------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLI 259 (417)
T ss_pred hhhccccccc------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Confidence 6432211110 0346778899999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC------CchhHHHHHHHHHHHHhh
Q psy14136 329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG------CNVALVLITWFVAVTLIT 402 (534)
Q Consensus 329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 402 (534)
.....+.+.+.++++|+++||+|.+|.+ .+.+..+.++........ .+.......++..+.+.+
T Consensus 260 a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G 329 (417)
T COG2223 260 AFLFPLIGALARPLGGWLSDRIGGRRVT----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG 329 (417)
T ss_pred HHHHHHHHHHHHhccchhhhhccchhHH----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998874 344444444444444442 345566666777778888
Q ss_pred hcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 403 ASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 403 ~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
......+..+..++|++.|.+.|+...++.+|++.-|...|...+. + ..+...|++...+.+++.+.......+
T Consensus 330 ~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~--t--g~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 330 LGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDL--T--GSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred cCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHh--c--ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888899999999999999999999999999999999999999998 3 358999999999888888776655443
No 21
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6.2e-35 Score=295.07 Aligned_cols=347 Identities=15% Similarity=0.133 Sum_probs=263.3
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..++++++++.++++++ ++++.++++|+++|++.+.
T Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a--~~~~~ll~~r~l~Gig~~~ 113 (393)
T PRK09705 36 RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY--PQSALLLSSALLGGVGIGI 113 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC--cchHHHHHHHHHHHhHHHH
Confidence 66999999999999999999999999999999999999999999999999999997766 6999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
..+....++.+++| ++|+++++.+ .+..+|..+++.+++++.++. +||+.+.+.++..++..+..++..++.|++++
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (393)
T PRK09705 114 IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH 192 (393)
T ss_pred HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 99999999999996 7899999955 678899999999999988875 89999877666554433322222222221100
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
. + +...++.+++|+.|...+..++....+.....|.|.|+++ +|.+..+++.+.++.
T Consensus 193 ------~--------------~--~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~ 249 (393)
T PRK09705 193 ------K--------------T--TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALM 249 (393)
T ss_pred ------C--------------C--CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHH
Confidence 0 0 0012345677888888777777778888899999999987 799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
.++.++++++.+++.||+++|+.. ..+..+..+....+...+.+.... ..++.+++.+...+......
T Consensus 250 ~i~~i~g~~~~g~l~~r~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~ 317 (393)
T PRK09705 250 TLGQAAGALLMPAMARHQDRRKLL----------MLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLA 317 (393)
T ss_pred HHHHHHHHHHHHHHHhhccchHHH----------HHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHH
Confidence 999999999999999999987653 333344334333333233222222 22333445555555554444
Q ss_pred hccC-CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh-cCCccc
Q psy14136 413 VDIG-PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL-GTSEVQ 483 (534)
Q Consensus 413 ~~~~-p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~~~~ 483 (534)
.+.. |++ +|+.+|+.+...++++.++|.+.|++.|. . ++|...|++.++++++..++...+ ++++.+
T Consensus 318 ~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~--~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 318 LDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI--S--GNYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4544 444 99999999999999999999999999998 2 358888888877777666665444 444333
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.1e-35 Score=297.11 Aligned_cols=343 Identities=17% Similarity=0.164 Sum_probs=268.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+.
T Consensus 30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~ 107 (377)
T TIGR00890 30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA--DSLAALYLTYGLASAGVGI 107 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH--HHHHHHHHHHHHHhHHHHH
Confidence 55999999999999999999999999999999999999999999999999999886665 6999999999999999998
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+.....+.+++| ++|+++.++. .+.++|..+++++.+.+.+..|||+.|++.+++.++..+..+++.+++|++..+
T Consensus 108 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (377)
T TIGR00890 108 AYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIK 186 (377)
T ss_pred HHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccc
Confidence 88889999999996 6799999954 778899888777777777788999999999988888777776666654432111
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
.+ ++ .+.++...++.+++|.++...+..++..........+.+.|.++ +|.+..+.+.+.+...
T Consensus 187 ~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (377)
T TIGR00890 187 TN-IE--------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISS 250 (377)
T ss_pred cC-cc--------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 00 00 01112245678888888887777776666666666677777765 7888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-VALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++.++++++.|++.||++||+.+ .++..+..+....+...+.. ........++.+++.+...+......
T Consensus 251 ~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 320 (377)
T TIGR00890 251 IFNGGGRPFLGALSDKIGRQKTM----------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLV 320 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhh----------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHH
Confidence 99999999999999999998763 34444444444444444321 22222333444555555555566677
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY 471 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~ 471 (534)
.|..|++ |+++.|+.+....+|..++|.+.|.+.+. .+|+..|++.+++.++++
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 321 SDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHHHHHHHHhc
Confidence 7888766 99999999999999999999999999998 789999998887776654
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.7e-34 Score=290.24 Aligned_cols=337 Identities=15% Similarity=0.154 Sum_probs=261.8
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|+++++.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++.+.
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~ 124 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA--NSFSLLLIGRACLGLALGG 124 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH--ChHHHHHHHHHHHHHhhHH
Confidence 55899999999999999999999999999999999999999999999999999887664 6899999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|+++++ ...+.++|..+++++++.+.+++|||+.|++.++++++..+..+...||.|++++
T Consensus 125 ~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~- 203 (394)
T PRK10213 125 FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS- 203 (394)
T ss_pred HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc-
Confidence 99999999999999999999999 5578899999999999999999999999999887776655444444454331110
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+.....++.+++|.++...+..++.....+...++.+.++.+.+|++..+.+.+....+
T Consensus 204 ---------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~ 262 (394)
T PRK10213 204 ---------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFG 262 (394)
T ss_pred ---------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Confidence 01113456888999988777766666666666667644444457999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
++.+++.++.+++.||.+++.. .....+.....+++....+ +.+......++.+++.+...+.....++
T Consensus 263 ~~~iig~~~~~~l~~r~~~~~l----------~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 331 (394)
T PRK10213 263 IASFVGTSLSSFILKRSVKLAL----------AGAPLVLAVSALVLTLWGS-DKIVATGVAIIWGLTFALVPVGWSTWIT 331 (394)
T ss_pred HHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999998543321 1222222222222222333 4445555566666677777777777777
Q ss_pred ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136 414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY 471 (534)
Q Consensus 414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~ 471 (534)
+..|+++++..++.....++|..+||.+.|.+.|. .++...++..+.+.++..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 332 RSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDN-----IGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhhHHHHHHHHHHHHH
Confidence 77787778888888888899999999999999998 788888887766554443
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.8e-34 Score=295.69 Aligned_cols=390 Identities=17% Similarity=0.156 Sum_probs=270.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136 10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK 89 (534)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (534)
...++++......+++++++++|+..++...+.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------------------------------------- 50 (438)
T PRK09952 15 LSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFN-------------------------------------------- 50 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------
Confidence 344566667777889999999999999977664422
Q ss_pred CCCCCCccc--cCChhhHHHHH-----HHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH---
Q psy14136 90 PNVNEEGEF--DWDTTTQGAIL-----SSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--- 159 (534)
Q Consensus 90 P~~~~~~~~--~~s~~~~g~~~-----s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--- 159 (534)
+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++..+.+++++++++++++ +++.
T Consensus 51 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~ 121 (438)
T PRK09952 51 ------REFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLL--PSFSTIG 121 (438)
T ss_pred ------HhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcC--CcHHHHH
Confidence 122 34444 35443 45667788999999999999999999999999999999997766 5665
Q ss_pred -----HHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh--------hcCCchh
Q psy14136 160 -----ALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA--------HYGWRSV 225 (534)
Q Consensus 160 -----~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~--------~~gwr~~ 225 (534)
.++++|+++|++.|..++....++.|++|+++|++..+ ...+..+|.+++..+...+.. .+|||++
T Consensus 122 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~ 201 (438)
T PRK09952 122 WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP 201 (438)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHH
Confidence 58899999999999999999999999999999999988 557888888888777666542 5799999
Q ss_pred hhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHH-HHHHHHHHHH
Q psy14136 226 FYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGI-TTFGRIWVHY 304 (534)
Q Consensus 226 f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 304 (534)
|++.+++.++. +......||+|+..+ .+++. + +.+++....+.++++|+.+...+ ..++.....+
T Consensus 202 f~~~~~~~l~~-~~l~~~~~es~~~~~---~~~~~--~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (438)
T PRK09952 202 FLFSIVLVLIA-LWVRNGMEESAEFEQ---QQHEQ--A--------AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMY 267 (438)
T ss_pred HHHHHHHHHHH-HHHHHhCCCChhHHH---HHhhc--c--------cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHH
Confidence 99887665442 222223344432110 00000 0 00001112234667777666544 4455566777
Q ss_pred HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH--hh
Q psy14136 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI--GY 382 (534)
Q Consensus 305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~ 382 (534)
....|.|.|+++.+|.+......+....++..+++.++.|+++||++||+.+ ..+.++..+....+ ..
T Consensus 268 ~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~ 337 (438)
T PRK09952 268 IVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMAL 337 (438)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH
Confidence 7888999999888888876655555566777888899999999999998753 22222222222111 11
Q ss_pred -cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136 383 -LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLSPMVAGYFLQDDETSLESWRQV 459 (534)
Q Consensus 383 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 459 (534)
............++.+++.+...+....+..|.+|.+ |+++.|+.+... .+++.++|.+.+++.+. .+ .+|...
T Consensus 338 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~--~~-~~~~~~ 414 (438)
T PRK09952 338 EAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY--FG-GSWHSV 414 (438)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--cC-CCchHH
Confidence 2212333333344445555666666778888999876 999999876664 48999999999999885 11 357788
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q psy14136 460 FLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 460 f~~~~~~~~~~~~~~~~~~~ 479 (534)
+...+++.+++++..+..++
T Consensus 415 ~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 415 AIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHHccc
Confidence 88888888877777666543
No 25
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=7.7e-34 Score=289.00 Aligned_cols=358 Identities=14% Similarity=0.058 Sum_probs=279.0
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136 12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN 91 (534)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 91 (534)
.++.+...+.+.++.++.++....+...+|.+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------------ 39 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAV------------------------------------------------ 39 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHH------------------------------------------------
Confidence 35556666667778888888888888777766
Q ss_pred CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136 92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA 171 (534)
Q Consensus 92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g 171 (534)
.+++|+|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++
T Consensus 40 ---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~ 114 (406)
T PRK15402 40 ---VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA--QSIEQFTLLRFLQGIG 114 (406)
T ss_pred ---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHhH
Confidence 55899999999999999999999999999999999999999999999999998886554 6899999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
.+...+...+++.|++|+++|.+..++ .....+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||++++
T Consensus 115 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (406)
T PRK15402 115 LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGR 194 (406)
T ss_pred hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 998889999999999999999999994 4667789999999999999989999999998888887766666666665432
Q ss_pred CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136 251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 330 (534)
.++.. +. ++...++++++++|.++...+..++..........+.|.++++.+|+++.+.+....
T Consensus 195 ~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~ 258 (406)
T PRK15402 195 VGEKL--SL--------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQV 258 (406)
T ss_pred ccccc--cH--------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHH
Confidence 11100 00 011234567889999988887777776666667777899988888999988888877
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh----cCCchhHHHHHHHHHHHHhhhccc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY----LGCNVALVLITWFVAVTLITASYA 406 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 406 (534)
...++.+++.++.+++.||+++|+.. .++.++..++...+.. ...+.++.....++.+++.+...+
T Consensus 259 ~~~~~~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 328 (406)
T PRK15402 259 PVFGALIAGNLTLARLTSRRPLRSLI----------RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANA 328 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhh
Confidence 77888999999999999999988653 3333333333333222 122344445555666666666665
Q ss_pred ccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 407 GAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 407 ~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
..........|+++|++.++.+....++..+|+.+.+.+.+.
T Consensus 329 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 329 GLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred hHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 555555444566699999999999999999999999999888
No 26
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.4e-34 Score=296.92 Aligned_cols=403 Identities=16% Similarity=0.210 Sum_probs=287.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136 14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN 93 (534)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 93 (534)
.+|..+..+.+.++..+.++..+....|.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------------------------------------------- 53 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYL-------------------------------------------------- 53 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHH--------------------------------------------------
Confidence 456666777888999999999888887766
Q ss_pred CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhh
Q psy14136 94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIA 171 (534)
Q Consensus 94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g 171 (534)
+ ++|+|+++.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++.. ..+++.+.+.|++.|++
T Consensus 54 -~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 54 -V-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF 131 (438)
T ss_pred -H-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 3 3599999999999999999999999999999999999999999999999888754431 13677888999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh-hhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI-AHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
.+..++.....+.|++|+++|++++++ ..+.++|..+++++.+.+. ...+||..|++.++++++..++.++++||+|+
T Consensus 132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 999999999999999999999999995 4788899998888776544 45789999999998888877777777787665
Q ss_pred CCcccchhhhh-hhhhccCccccCCCCCccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 250 KHPRITRKELD-YIQENIEPTIVGSKGLKVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 250 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
+.+..+.++.+ +..+...++.+++.+.+.. .+.+++++.+|...+..++.....+++.+|+|.|+++..|+++.++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 291 (438)
T TIGR00712 212 SCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSW 291 (438)
T ss_pred hcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHH
Confidence 42211111000 0000000000000001111 234788999999888888877888888899999999888999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITASYA 406 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 406 (534)
...+..+.++++.++.|++.||+++++... ..........+....+...+ .+.+......+..+++......
T Consensus 292 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 364 (438)
T TIGR00712 292 AYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-------TGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVM 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccH-------HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHH
Confidence 999999999999999999999997554320 01111111111111111111 1222222222222222111111
Q ss_pred ccchhhhccCCCc-hhHHHHHHhHHHHhhh-hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 407 GAMANVVDIGPNF-AGPILAFAQTIHMTAS-FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
.......+..|++ ||++.|+.+...++++ .++|.+.|.+.|. .+|+.+|++.+++.+++.+..+++.++
T Consensus 365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1123456777765 9999999999988875 6899999999998 789999988888777777776665443
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.3e-34 Score=294.62 Aligned_cols=385 Identities=16% Similarity=0.169 Sum_probs=277.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136 10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK 89 (534)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (534)
+..+++|..+..++++++..++++..++.+.|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------------------------------------- 38 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEV---------------------------------------------- 38 (405)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 3456778888889999999999999999999888
Q ss_pred CCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 90 PNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQG 169 (534)
Q Consensus 90 P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G 169 (534)
++++|+++.+.|++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++ ++++.+++.|++.|
T Consensus 39 -----~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G 111 (405)
T TIGR00891 39 -----AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA--PGYITMFIARLVIG 111 (405)
T ss_pred -----HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 55899999999999999999999999999999999999999999999999999886555 68999999999999
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC--CchhhhhhchhhHHHHHHhhhhccC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG--WRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
++.+...+...+++.|++|+++|+++.+ ...+..+|.++++.+++.+.+..+ ||+.|++.+++.++. ++.....||
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~ 190 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPE 190 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCC
Confidence 9999999999999999999999999999 457889999999999999888766 999998866554443 333444566
Q ss_pred CCCCCcccchhh-h-hhhhhccCccccCCC---CCcccHHHhh-cC-HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC
Q psy14136 247 APLKHPRITRKE-L-DYIQENIEPTIVGSK---GLKVPWVSIL-TS-PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG 319 (534)
Q Consensus 247 ~p~~~~~~~~~~-~-~~~~~~~~~~~~~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 319 (534)
+++..+..++++ . +..++....+..... ......++.. +. +.+...................+.|.|+.+.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 270 (405)
T TIGR00891 191 AEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLG 270 (405)
T ss_pred ChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhC
Confidence 443211111100 0 000000000000000 0000011111 11 112233333344445555667788999988889
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT 399 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (534)
++..+.+.+.+...++.+++.++.+++.||+++|+.+ .++.++.............+.+...+..++.++
T Consensus 271 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 271 LSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQM 340 (405)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998764 223222222222111122233333344344444
Q ss_pred HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHH
Q psy14136 400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIA 463 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~ 463 (534)
+.+...+.....+.|..|++ |++++|+.+...++|+.++|.+.|.+.|. .| |+..+...
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-----~g~~~~~~~~~ 401 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-----LDEYGTALASL 401 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHhh
Confidence 44555566667778888866 99999999999999999999999999998 55 76666553
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.3e-34 Score=288.13 Aligned_cols=345 Identities=17% Similarity=0.169 Sum_probs=257.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|+|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+.
T Consensus 30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~r~l~G~~~~~ 107 (382)
T PRK10091 30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS--SSYLMLAIGRLVSGFPHGA 107 (382)
T ss_pred HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhhHH
Confidence 55899999999999999999999999999999999999999999999999999987665 6999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+....++.+++|+++|+++++. ..+..+|..+++++++++.+..|||++|++.+++.++..+..++.+||.+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~ 187 (382)
T PRK10091 108 FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG 187 (382)
T ss_pred HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 899999999999999999999994 4788999999999999999989999999999888777666666666664321110
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+. + ...+.++++..|......++..........+.+.++++.+|+++.+.+++.+...
T Consensus 188 ---~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 245 (382)
T PRK10091 188 ---GL------------------R-EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVG 245 (382)
T ss_pred ---CH------------------H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00 0 1123567777777666555555555555667788888778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc-hhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM-ANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 412 (534)
++.+++.++.+++.||+++++.+ ..+..+.++..+.+.....+.+...+..++.+.+.....+... ...
T Consensus 246 ~~~~ig~~~~g~l~~r~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (382)
T PRK10091 246 LGMVLGNLLSGRLSGRYSPLRIA----------AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLL 315 (382)
T ss_pred HHHHHHhHHHheeccccCchhHH----------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999987653 3344444444433332221333333333333333332222222 233
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+..|++ ++.+ ..+....+|..+||.+.|.+.|. . .+|+..+.+.+++.++.......+..
T Consensus 316 ~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 316 QNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL--G--LAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred HhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc--c--cCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333 4444 34677889999999999999986 1 57989998887777666665555443
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=7e-35 Score=293.60 Aligned_cols=371 Identities=20% Similarity=0.266 Sum_probs=279.3
Q ss_pred HHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCccccCChh
Q psy14136 24 TGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTT 103 (534)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~s~~ 103 (534)
++|+..+.++..++...|.+ ++++|+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~g~s~~ 30 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYL---------------------------------------------------VEEIGLSKT 30 (379)
T ss_pred chhhHHHHhHHhhhhhhHHH---------------------------------------------------HHHhCCCHh
Confidence 56889999999999999888 558999999
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136 104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183 (534)
Q Consensus 104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 183 (534)
+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+...+...+++
T Consensus 31 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 108 (379)
T TIGR00881 31 DLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS--TSLWVMAALWALNGIFQGMGWPPCGRTV 108 (379)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhccccCCchHHHH
Confidence 99999999999999999999999999999999999999999999986655 6899999999999999999999999999
Q ss_pred hcccCCCcchhhhh-hhhhhhhHHHhhh-hHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhh
Q psy14136 184 GHWIPSNERSRFMS-SFQGFSFGIGLTY-PLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDY 261 (534)
Q Consensus 184 ~~~~~~~~r~~~~~-~~~~~~~G~~~g~-~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~ 261 (534)
.|++|+++|+++++ ...+..+|..+++ .+++.+.+..+||+.|++.+++.++..++.+++.||+|++++..+.++.+.
T Consensus 109 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (379)
T TIGR00881 109 TKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN 188 (379)
T ss_pred HHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc
Confidence 99999999999999 5578899999999 467777777899999999988888777777777777665432211111100
Q ss_pred hh-h-ccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHH
Q psy14136 262 IQ-E-NIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLS 339 (534)
Q Consensus 262 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~ 339 (534)
.+ + ...+++++.+..+...++++++|.++...+..++.......+..+.|.|+++.+|++..+.+.+.+...++.+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 268 (379)
T TIGR00881 189 EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVG 268 (379)
T ss_pred cccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchh
Confidence 00 0 000000111122234567889999999988888888888889999999999888999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCC
Q psy14136 340 SVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPN 418 (534)
Q Consensus 340 ~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 418 (534)
.++.+++.||..+++... ............+...... ..+........+..+.......+.......|..|+
T Consensus 269 ~~~~g~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 341 (379)
T TIGR00881 269 TLLAGWLSDKLFNGRRGP-------LAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPK 341 (379)
T ss_pred HHHHHHHHHHHcCCcchH-------HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc
Confidence 999999999875443320 1111111112222222221 11222222333333333333333445567788876
Q ss_pred c-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136 419 F-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQV 459 (534)
Q Consensus 419 ~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 459 (534)
+ |+++.|+.+....+|+.++|.+.|.+.|. .||+..
T Consensus 342 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~ 378 (379)
T TIGR00881 342 KAAGTAAGFVGFFAYLGGILAGLPLGYLADG-----FGWAGA 378 (379)
T ss_pred chhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-----hccccc
Confidence 6 99999999999999999999999999998 677654
No 30
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.1e-34 Score=295.23 Aligned_cols=373 Identities=13% Similarity=0.115 Sum_probs=266.9
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
+.++..++.++++++...+++...+...|.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i------------------------------------------------- 44 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLI------------------------------------------------- 44 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-------------------------------------------------
Confidence 4556667778899999999999999888877
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++ ++++.++++|+++|++.
T Consensus 45 --~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~g~ 120 (426)
T PRK12307 45 --KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA--SGVIMLTLSRFIVGMGM 120 (426)
T ss_pred --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence 55999999999999999999999999999999999999999999999999999886665 68999999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
+...+....++.|++|+++|+++.++ ..+..+|.++++.+.+.+.+.+|||+.|++..+..++ .+ ++....|+++
T Consensus 121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~---~~~~~~p~~~ 196 (426)
T PRK12307 121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VI---YIRARAPESK 196 (426)
T ss_pred hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HH---HHHHHCCCCh
Confidence 99999999999999999999999995 4788999999999999998889999999875433222 21 1111122221
Q ss_pred cccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH---HHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136 252 PRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF---GRIWVHYIFIIPGPRYMKTILGFSIQTNGLL 328 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 328 (534)
+..+ ++.+ +..++.+...+..+..+++++++|.++....... ......+.+..++|.|+++ .|.++.+.+.+
T Consensus 197 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 271 (426)
T PRK12307 197 EWEE-AKLS---GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNL 271 (426)
T ss_pred HHHH-hhhh---ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 1100 0000 0000000000111235677888887765443322 2223334467788999987 69998888988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH-HHHhhhcccc
Q psy14136 329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA-VTLITASYAG 407 (534)
Q Consensus 329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 407 (534)
.+...++.+++.++.|++.||++||+.+ ..+.++..+.++.................+. ++......+.
T Consensus 272 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (426)
T PRK12307 272 MTAAAFGTVLGNIVWGLCADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGL 341 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHH
Confidence 8899999999999999999999988653 3333333333332222221222211111111 1111122233
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI 462 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~ 462 (534)
....+.|..|++ ||+++|+.+....+++.++|.+.|++.+. .++....++
T Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-----~g~~~~~~~ 392 (426)
T PRK12307 342 VPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-----MGLGAALTF 392 (426)
T ss_pred HHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-----ccHHHHHHH
Confidence 445667888876 99999999999999999999999999988 666554333
No 31
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=5e-34 Score=297.73 Aligned_cols=417 Identities=13% Similarity=0.094 Sum_probs=279.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCC
Q psy14136 11 AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKP 90 (534)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 90 (534)
..++++.+++++.++.+...+|...++.+.|.+.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~------------------------------------------ 47 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYY------------------------------------------ 47 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Confidence 34456667777888999999999999988876622100
Q ss_pred CCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136 91 NVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV----LHYGALIALRS 166 (534)
Q Consensus 91 ~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r~ 166 (534)
..+.+.+..+.+++.+.+.++..+++++.|+++||+|||+++.+++++..+++++++++.. .+++.++++|+
T Consensus 48 ----~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~ 123 (502)
T TIGR00887 48 ----HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRF 123 (502)
T ss_pred ----cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHH
Confidence 1134556778899999999999999999999999999999999999999999988766521 12788999999
Q ss_pred HHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-----------------------hcCC
Q psy14136 167 IQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-----------------------HYGW 222 (534)
Q Consensus 167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-----------------------~~gw 222 (534)
++|++.|...+....+++|++|+++|+++++ ......+|.++++.++..+.. .++|
T Consensus 124 l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 203 (502)
T TIGR00887 124 WLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW 203 (502)
T ss_pred HHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH
Confidence 9999999999999999999999999999999 457888999888888765532 2479
Q ss_pred chhhhhhchhhHHHHHHhhhhccCCCCCC---cccchhhhhhhhh----ccCccc-------cCCCCCcccHHHhhcC--
Q psy14136 223 RSVFYTTGSLGAIWCVAWWFLAFDAPLKH---PRITRKELDYIQE----NIEPTI-------VGSKGLKVPWVSILTS-- 286 (534)
Q Consensus 223 r~~f~i~~~~~li~~i~~~~~~~~~p~~~---~~~~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~-- 286 (534)
|++|.+.++++++..+ ..+++||+|+.. .+.+++..+...+ ...++. .+.+..+.++++++++
T Consensus 204 R~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (502)
T TIGR00887 204 RILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFF 282 (502)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHh
Confidence 9999887776665444 456779998742 2211111111110 000000 0001112356777653
Q ss_pred -HHH----HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh------------HhhhHHHHHHHHHHHHHHHHHH
Q psy14136 287 -PPA----WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL------------LTGAPFLCSYLSSVLFCYLADQ 349 (534)
Q Consensus 287 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr 349 (534)
++. +......++..+.+++...|.|.++++ .|++..+.+. ......++.+++.++.+++.||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr 361 (502)
T TIGR00887 283 KWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI 361 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 222 222233444555667778889999976 6887543221 1233445677788999999999
Q ss_pred HhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC---CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHH
Q psy14136 350 LFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG---CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILA 425 (534)
Q Consensus 350 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g 425 (534)
+|||+.+ .++..+.++++.++.... ..........+...++.....+..+.+..|.+|.+ |+++.|
T Consensus 362 ~gRR~~l----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g 431 (502)
T TIGR00887 362 IGRKPIQ----------LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHG 431 (502)
T ss_pred hcchhHH----------HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHH
Confidence 9998763 233333333333332211 01111111111122222234455667788999988 999999
Q ss_pred HHhHHHHhhhhHHhHhhhhcccccccC-----hhhHHHHHHHHHHHHHHHHHHHHhhcCCccccC
Q psy14136 426 FAQTIHMTASFLSPMVAGYFLQDDETS-----LESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485 (534)
Q Consensus 426 ~~~~~~~~g~~i~~~~~g~l~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (534)
+.+.+..++++++|.+.+++.+..+.. ..++...|++.+++.+++.+..+++++++.++.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~l 496 (502)
T TIGR00887 432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSL 496 (502)
T ss_pred HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCH
Confidence 999999999999999999998851100 034556777777777777666655676655443
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.5e-34 Score=298.60 Aligned_cols=388 Identities=14% Similarity=0.141 Sum_probs=266.2
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
+++|..+..+++++++..+++..++...|.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i------------------------------------------------- 46 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEV------------------------------------------------- 46 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 4566777788999999999999999888887
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
.+++|+|+.+.+++.+.+.+++.++.++.|+++||+|||++++.+.++.+++.++++++ ++++.+++.|++.|++.
T Consensus 47 --~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~ 122 (496)
T PRK03893 47 --QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA--PGYWTLFIARLVIGMGM 122 (496)
T ss_pred --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999886654 68999999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
+...+....++.|++|+++|+++++ ...+..+|..+++.+++.+.+.++||+.|++.++..++ .++.....||.++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~ 201 (496)
T PRK03893 123 AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWK 201 (496)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhh
Confidence 9999999999999999999999999 44788999999999999999999999999875433222 222223334432211
Q ss_pred cccchhh-hhhhhhccCccccCCCCCcccH----------HHhh-------------------------------cCHHH
Q psy14136 252 PRITRKE-LDYIQENIEPTIVGSKGLKVPW----------VSIL-------------------------------TSPPA 289 (534)
Q Consensus 252 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~-------------------------------~~~~~ 289 (534)
+..++++ .+...+... ..++..... ...+ +.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (496)
T PRK03893 202 EKHAGKAPVRTMVDILY----RGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTG 277 (496)
T ss_pred hhccccccchhHHHHHh----cchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHH
Confidence 1000000 000000000 000000000 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
....+..+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|++.||+++|+.+ ..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~ 347 (496)
T PRK03893 278 VMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY----------VCS 347 (496)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHH
Confidence 0111111111111123456789999877899999999999999999999999999999999988653 233
Q ss_pred HHHHHHHHHHHhhcCCch-hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 370 QVIPALLVMLIGYLGCNV-ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
..+..+..+.+....... +......++.++......+....++.+..|++ ||+++|+.+....+|+.++|.+.|.+.|
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 348 LLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 333333322222222122 22222222222222233344556777888865 9999999999999999999999999999
Q ss_pred ccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 448 DDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
. .+|...+...+.+..+..+.
T Consensus 428 ~-----~g~~~~~~~~~~~~~~~~~~ 448 (496)
T PRK03893 428 R-----LDLGTALASLSFSLTFVVIL 448 (496)
T ss_pred c-----CChHHHHHHHHHHHHHHHHH
Confidence 8 77887776655544443333
No 33
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2e-33 Score=281.48 Aligned_cols=374 Identities=14% Similarity=0.070 Sum_probs=282.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCC
Q psy14136 16 VVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEE 95 (534)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 95 (534)
+..+.+.++++++.|.....++...+.+. +
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~--------------------------------------------------~ 62 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLN--------------------------------------------------K 62 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------------------------------h
Confidence 45677789999999999999998877762 3
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhh
Q psy14136 96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA---VLHYGALIALRSIQGIAS 172 (534)
Q Consensus 96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---~~~~~~l~~~r~l~G~g~ 172 (534)
.++|+|++|.+++.+++.+++.++.++.|++.||+|+|+++.++.+++++.+++++++. .++++.+++.|++.|++
T Consensus 63 ~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig- 141 (462)
T PRK15034 63 IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA- 141 (462)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-
Confidence 38999999999999999999999999999999999999999999999999999876652 25899999999999998
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh-----h-------------hcCCchhhhhhchhh
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI-----A-------------HYGWRSVFYTTGSLG 233 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~-----~-------------~~gwr~~f~i~~~~~ 233 (534)
+..++.....+++|+|+++||+++|+. ...++|..+++++...+. . ..+||.++++.+++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 778999999999999999999999966 456667665555443322 2 234777777887777
Q ss_pred HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136 234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY 313 (534)
Q Consensus 234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (534)
++..++.+++.++.|+.+ ......++.+|+|+.|.+++.+++.+..+.++..++|.|
T Consensus 222 iv~~i~~~~~~~~~~~~~-----------------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~ 278 (462)
T PRK15034 222 AIATIAAWSGMNDIASSR-----------------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAML 278 (462)
T ss_pred HHHHHHHHHhCCCccccc-----------------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777676655433211 112245678999999999999999999999999999999
Q ss_pred hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH-HhhcC----Cchh
Q psy14136 314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML-IGYLG----CNVA 388 (534)
Q Consensus 314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~ 388 (534)
+++.+ +.........+..+...+.++++|+++||+|+++.+ .++++...+.... +...+ .+.+
T Consensus 279 ~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~ 346 (462)
T PRK15034 279 AKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFI 346 (462)
T ss_pred HHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHH
Confidence 98754 333333334455678899999999999999998764 2333222222211 11111 1234
Q ss_pred HHHHHHHHHHHHhhhcccccchhhhccCCC----------------------chhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 389 LVLITWFVAVTLITASYAGAMANVVDIGPN----------------------FAGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
.....++..++..|..+...+-.+..++|+ +.|.+.|+...++.+|+++-|.+.|...
T Consensus 347 ~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~ 426 (462)
T PRK15034 347 AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSL 426 (462)
T ss_pred HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence 444444445566666666777666666663 5789999999999999999999999988
Q ss_pred cccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
+. + +++...|+...+..++++++.+....
T Consensus 427 ~~--~--g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 427 NM--T--GSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HH--c--CCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77 3 56888899988888887777665543
No 34
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.5e-33 Score=280.40 Aligned_cols=343 Identities=16% Similarity=0.102 Sum_probs=252.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-H-----HHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-V-----LHYGALIALRSIQ 168 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~-----~~~~~l~~~r~l~ 168 (534)
++++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++++++.++. . .+++.+++.|+++
T Consensus 43 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (399)
T PRK05122 43 HDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLL 122 (399)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Confidence 448999999999999999999999999999999999999999999999888877654432 1 2567899999999
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
|++.+...+...+++.|++|+++|+++++++ .+..+|.++|+++++.+.+.+|||..+++.+++.++..+. .++.
T Consensus 123 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~~~ 198 (399)
T PRK05122 123 GIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL----ARPR 198 (399)
T ss_pred HhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH----HhcC
Confidence 9999999999999999999999999999955 6788899999999999999999999988766554432222 1222
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
|+.++. +++ +.++++.++ +.+.......+..........+.|.|+.+ .|. .+.+.
T Consensus 199 ~~~~~~--~~~------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~ 253 (399)
T PRK05122 199 PAVPPV--KGE------------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAAL 253 (399)
T ss_pred CCCCCC--Ccc------------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchH
Confidence 221110 000 011222332 22222222333444555666778888876 465 34566
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
......++.+++.++.|++.||+++|+.+ ..+..+.++....+...+ +.+...+..++.+++.+...+.
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~ 322 (399)
T PRK05122 254 ALTLFGVAFVGARLLFGNLINRLGGLRVA----------IVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLVFPA 322 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHHHHH
Confidence 67778888999999999999999987643 344444444444444444 4555555556666666666666
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
......+..|++ ||++.|+.+....+|..++|.+.|.+.+. .+|+..|++.+++.+++.+....++++++
T Consensus 323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 323 LGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----FGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 556666767755 99999999999999999999999999998 78999999988888887777666655443
No 35
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.5e-33 Score=286.27 Aligned_cols=353 Identities=13% Similarity=0.101 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136 15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE 94 (534)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 94 (534)
|++....++++.++.++|+..++.+.|.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i--------------------------------------------------- 41 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAI--------------------------------------------------- 41 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence 34456678999999999999999999988
Q ss_pred CccccCChhhHHHHH-HHH-----HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------H
Q psy14136 95 EGEFDWDTTTQGAIL-SSF-----YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------A 160 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~-s~~-----~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~ 160 (534)
++|++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+.+++++++++++++ ++++ .
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~ 119 (434)
T PRK15075 42 AKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV--PGYATIGLAAPLL 119 (434)
T ss_pred HHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHH
Confidence 448888777765443 322 23334788999999999999999999999999999997766 4655 4
Q ss_pred HHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhch
Q psy14136 161 LIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGS 231 (534)
Q Consensus 161 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~ 231 (534)
++++|+++|++.+...+....+++|++|+++|++++++. .+.++|..+++.+++.+. +.+|||++|++..+
T Consensus 120 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 120 VLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 689999999999999999999999999999999999955 567777777777766653 46899999987543
Q ss_pred hhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhch
Q psy14136 232 LGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAI-GITTFGRIWVHYIFIIPG 310 (534)
Q Consensus 232 ~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 310 (534)
.. + ..+ +.++.+++.+. ...+. + +.+.+..++...++++.+.. .+..++.....+.+..|.
T Consensus 200 ~~-~---~~~-~~~~~~~e~~~---~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (434)
T PRK15075 200 IV-P---FIF-LIRRSLEETEE---FLARK--H--------RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYT 261 (434)
T ss_pred HH-H---HHH-HHHHhcCCCHH---HHHhh--h--------ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1 111 22222211110 00000 0 01111224444556555543 333444556677788999
Q ss_pred hhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHH--HhhcCCch
Q psy14136 311 PRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVML--IGYLGCNV 387 (534)
Q Consensus 311 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~ 387 (534)
|.|+++.+|++..+.+++..+..++.+++.++.|+++||++||+.+ ..+..+..+ .+.. ......+.
T Consensus 262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK15075 262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSF 331 (434)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCch
Confidence 9999988899988888888888899999999999999999998753 121111111 1111 11112122
Q ss_pred hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccc
Q psy14136 388 ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQD 448 (534)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~ 448 (534)
........+.+++.+...+.......|..|++ |+++.|+.+..... ++.++|.+.|.+.|.
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 22222233334445555555567778888876 99999997665554 588899999999998
No 36
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.3e-33 Score=289.13 Aligned_cols=365 Identities=15% Similarity=0.149 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcccc
Q psy14136 20 MMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFD 99 (534)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~ 99 (534)
..+++++++...+...++..+|.+ .+++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~---------------------------------------------------~~~~g 41 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNTALPSM---------------------------------------------------AQSLG 41 (471)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH---------------------------------------------------HHHhC
Confidence 335677888888988888888877 44899
Q ss_pred CChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhH
Q psy14136 100 WDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAM 179 (534)
Q Consensus 100 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~ 179 (534)
.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++ ++++.+++.|+++|++.+...+..
T Consensus 42 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~ 119 (471)
T PRK10504 42 ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS--GTLNELLLARVLQGVGGAMMVPVG 119 (471)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999988886554 689999999999999999999999
Q ss_pred HHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhh
Q psy14136 180 YALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKE 258 (534)
Q Consensus 180 ~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~ 258 (534)
.+++.|++|+++|+++.++ ....++|..+++.+++.+.++.|||+.|++..++..+..++.....|+.+....+.+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 199 (471)
T PRK10504 120 RLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSG 199 (471)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHH
Confidence 9999999999999999994 478889999999999999999999999999887777766666666555443322221110
Q ss_pred hhh-----------hhhccC-----------------------ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHH
Q psy14136 259 LDY-----------IQENIE-----------------------PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304 (534)
Q Consensus 259 ~~~-----------~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (534)
... ..+... .++...+++..+ .+++|+|.++...+..++......
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~ 278 (471)
T PRK10504 200 FLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSG 278 (471)
T ss_pred HHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHH
Confidence 000 000000 000011111222 358899999888888888877777
Q ss_pred HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG 384 (534)
Q Consensus 305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (534)
....+.|.|++...|.++.+.++......++.+++.++.+++.||+++|+.+ ..+..+.++...++....
T Consensus 279 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~ 348 (471)
T PRK10504 279 MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----------VATTLGLALVSLLFMLVA 348 (471)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHhcc
Confidence 7778889999887899999999999888888999999999999999988753 344444444333333322
Q ss_pred --CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 385 --CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 385 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
...+......++.+.+.+...+.......+..|++ ++.++|+.++...+|..+|+.+.|.+.+.
T Consensus 349 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 349 LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222233344444556666666667777777765 99999999999999999999999998876
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1e-32 Score=280.27 Aligned_cols=330 Identities=10% Similarity=0.018 Sum_probs=245.8
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|.+..+.++..+++.++++++++++|+++||+|||++++.+.+++++++++++++ ++++.++++|+++|++.+.
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~Gi~~~~ 120 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT--TSMTQFLIARFIQGTSICF 120 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH
Confidence 55999999999999999999999999999999999999999999999999999987655 6999999999999999987
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+....++.|++|+++|+++++ ...+..+|..+||.+++.+.+++|||+.|++.+++.++..+..++.+||+++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~ 200 (413)
T PRK15403 121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV 200 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC
Confidence 77888899999999999999999 55788999999999999999889999999999888887766656666765432111
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
.. +. +....++++++|||.+|...+...+.......+..+.|.++++.+|.++.+.++......
T Consensus 201 ~~--~~--------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~ 264 (413)
T PRK15403 201 PF--SA--------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVF 264 (413)
T ss_pred CC--Ch--------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHH
Confidence 00 00 011235678899999999888888888888888888999999988999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
.+.+++..+.+++.+|..+++.... ......++.++..+... ......+..+...++.+.+.+...+.......
T Consensus 265 ~~~~i~~~l~~~~~~~~~~~~~~~~---~~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al 338 (413)
T PRK15403 265 GAVIVANAIVARFVKDPTEPRFIWR---AVPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL 338 (413)
T ss_pred HHHHHHHHHHHHHhccCCchhHHHH---HHHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 8888877777776544333332100 00011122111111111 12213322344555556666666555553332
Q ss_pred ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
...+..+|++.++.+.....+..+++...+++.+.
T Consensus 339 ~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 339 FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22223389999999999999999999999988766
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.1e-33 Score=294.38 Aligned_cols=404 Identities=16% Similarity=0.130 Sum_probs=265.7
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
..+....+++.++.+...+|...++...+.+.++. ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~--- 44 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF----------------------------------------VA--- 44 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHh----------------------------------------cc---
Confidence 34455555567788888999999988877764321 00
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH----------HHHHHHHH
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA----------VLHYGALI 162 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~----------~~~~~~l~ 162 (534)
+...++++++.+.+++.+++.++.+++++++|+++||+|||++++++.++++++.++++++. .+.++.++
T Consensus 45 ~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 45 PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 11457799999999999999999999999999999999999999999999999888765531 12367789
Q ss_pred HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchhh
Q psy14136 163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSLG 233 (534)
Q Consensus 163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~~ 233 (534)
++|+++|++.|...+...++++|++|+++|++++++. .+..+|.++++.++..+. +.+|||++|++.+++.
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPA 204 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999955 678888888877765543 3579999999988777
Q ss_pred HHHHHHhhhhccCCCCCCccc-chhhhhhhhhccCccccCCCCCcccHHHhhc-----CHHHH------H---HHHHHHH
Q psy14136 234 AIWCVAWWFLAFDAPLKHPRI-TRKELDYIQENIEPTIVGSKGLKVPWVSILT-----SPPAW------A---IGITTFG 298 (534)
Q Consensus 234 li~~i~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~---~~~~~~~ 298 (534)
++..+. .+++||+|+..... +.++.+...+........ +......++.++ .+..+ . .....+.
T Consensus 205 ~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (479)
T PRK10077 205 LLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQ 282 (479)
T ss_pred HHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHH
Confidence 776544 55678877531111 111111100000000000 000000011110 00100 0 0111111
Q ss_pred HHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH
Q psy14136 299 RIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM 378 (534)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 378 (534)
.....+....+.|.+.++ .|.+.....+.....++..+++.++.+++.||++||+.+ ..+.++.+++.+
T Consensus 283 ~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~ 351 (479)
T PRK10077 283 QFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMF 351 (479)
T ss_pred HHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHH
Confidence 122233444566777665 788877777777778889999999999999999988753 344444444433
Q ss_pred HHhhc---CCchhHHHHHHHHHHHHhhh-cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc------c
Q psy14136 379 LIGYL---GCNVALVLITWFVAVTLITA-SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL------Q 447 (534)
Q Consensus 379 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~------~ 447 (534)
.+... ...........++.+++.+. ..+....++.|.+|++ |+++.|+.+...+++..+++.+.+.+. +
T Consensus 352 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~ 431 (479)
T PRK10077 352 SLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVA 431 (479)
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhh
Confidence 33221 11112222233333333332 3356678889998866 999999999999999999877776544 3
Q ss_pred ccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 448 DDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
. .++...|++.+++.++++++.+++
T Consensus 432 ~-----~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 432 H-----FHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred h-----ccCccHHHHHHHHHHHHHHHHHhc
Confidence 4 566677777777666665554443
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.8e-32 Score=277.07 Aligned_cols=325 Identities=17% Similarity=0.224 Sum_probs=254.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+.
T Consensus 32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~ 109 (385)
T TIGR00710 32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS--NNIETLLVLRFVQAFGASA 109 (385)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHcchhH
Confidence 55899999999999999999999999999999999999999999999999999886554 6899999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|+++++ ......+|..+++.+++.+.++.+||+.|++.+++.++..+..++..||+++++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (385)
T TIGR00710 110 GSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR 189 (385)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 99999999999999999999999 55788999999999999999999999999998888877777666666665433221
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
.+. ++....+++++++|+++...+..............+.|.++++.+|.++.+.+.+.....
T Consensus 190 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 252 (385)
T TIGR00710 190 IQI-----------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNI 252 (385)
T ss_pred CCH-----------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHH
Confidence 100 011124567888999888877777777777788888999998889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---C-CchhHHHHHHHHHHHHhhhcccccc
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---G-CNVALVLITWFVAVTLITASYAGAM 409 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
++.+++.++.+++.||+++|+.+ ..+..+..+....+... . ...........+.+++.+...+...
T Consensus 253 ~~~~~~~~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 322 (385)
T TIGR00710 253 IAMIFGGFLNGRFIKKWGAKSLL----------RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM 322 (385)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988653 22222222222222211 1 1222333344455566666667777
Q ss_pred hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 410 ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
....|..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus 323 ~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 323 AYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 777787787799999999999887666666666644443
No 40
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=6.6e-33 Score=279.16 Aligned_cols=353 Identities=16% Similarity=0.159 Sum_probs=268.3
Q ss_pred cCCCCCCC--CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 87 LEKPNVNE--EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGF-SQLVTAICSLLIPQAAVLHYGALIA 163 (534)
Q Consensus 87 ~~~P~~~~--~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~~l~~~a~~~~~~~l~~ 163 (534)
...|.++. ++++|.|+.++|++.+++.++..+.+++.|+++||+||||.++. +.++.+++.++++++ ++++.+++
T Consensus 15 ~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 92 (375)
T TIGR00899 15 LQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN--RNYFLLLV 92 (375)
T ss_pred HHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc--chHHHHHH
Confidence 34555554 77999999999999999999999999999999999999987655 555556666665444 68999999
Q ss_pred HHHHHhhhhcchhhhHHHHHhcccCCCcchhh--hh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHh
Q psy14136 164 LRSIQGIASGLTWPAMYALVGHWIPSNERSRF--MS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAW 240 (534)
Q Consensus 164 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~--~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~ 240 (534)
.|++.|.+.+...|...+++.|+.|+++|++. .+ ...+.++|.++++++++.+.+.+|||+.|++.+++.++..+..
T Consensus 93 ~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 172 (375)
T TIGR00899 93 LGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLV 172 (375)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999988888899999999999988777754 45 4467889999999999999999999999999988877777777
Q ss_pred hhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCC
Q psy14136 241 WFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGF 320 (534)
Q Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 320 (534)
++++||.|++++..+ ...+.++.+++|+++......++..........+.|.|+++.+|.
T Consensus 173 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (375)
T TIGR00899 173 WLFLPSYPRGAPGAL--------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGL 232 (375)
T ss_pred HHhCCCcccCccccc--------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCC
Confidence 766777654321100 011233456677776665555555555555667789999888899
Q ss_pred ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q psy14136 321 SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTL 400 (534)
Q Consensus 321 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (534)
++.+.+.+.....+..+++.++.|++.||+++|+.+ .++.++..+.+......+ +.+......++.+++
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM----------LLAALAGVAFYTGLAADN-SLWALLMLQLLNAIF 301 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999888777778888999999999999988753 223333333333333333 444444444555566
Q ss_pred hhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 401 ITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 401 ~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+...+....+..|..|++++++.++.+...++|..++|.+.|.+.+. .+|+..|++.+++.+++.++..++
T Consensus 302 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAER-----WSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhee
Confidence 666666667778888898888999999999999999999999999998 789999999888888777766554
No 41
>KOG2533|consensus
Probab=100.00 E-value=1.1e-32 Score=278.64 Aligned_cols=355 Identities=20% Similarity=0.247 Sum_probs=264.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|.+....+.+++.++++++++++.+++|.+.||++..+.+....+++++..++... .+|++.+++.|++.|+.++.
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFLLGLFESG 150 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhcc
Confidence 5688999999999999999999999999999999999999999999988888877544 36999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh------hhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI------AHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~------~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
.+|....+++.|+.++||++.++ +++..++|.++|++++..+. ...||||.|.+.++++++..+++++++|+.
T Consensus 151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 99999999999999999999999 55889999999999998864 347899999999999999999999999999
Q ss_pred CCCCcccchhhhhhhhhccCccc---cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136 248 PLKHPRITRKELDYIQENIEPTI---VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT 324 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 324 (534)
|++..-.+++|++...++.++.. ..++.++..+++.+++|.+|...+..++.....+++.+|+|.|+.+..|++..+
T Consensus 231 P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~ 310 (495)
T KOG2533|consen 231 PSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ 310 (495)
T ss_pred hhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH
Confidence 99776666666433222222111 111245567889999999999999999999999999999999999966799999
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
+..+..+..++++++.+++|+++||++.-..+ |..+.....+...++...+.... .........+.+..+....
T Consensus 311 a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~-----~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 384 (495)
T KOG2533|consen 311 ANLLSTPYDVGGIVGLILAGYLSDRLKTIFAR-----RLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGPYGLIAT 384 (495)
T ss_pred hccccchHHhhhHHHHHHHHHHHHHHhhhHHH-----HHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcchhhHHH
Confidence 99999999999999999999999996410000 11122222223333323333332 2333333344444444454
Q ss_pred ccccchhhhccCC-Cc-hhHHHHHHhHHHHhhhhHHhHhh-hhcccccccChhhHHHHHHH
Q psy14136 405 YAGAMANVVDIGP-NF-AGPILAFAQTIHMTASFLSPMVA-GYFLQDDETSLESWRQVFLI 462 (534)
Q Consensus 405 ~~~~~~~~~~~~p-~~-~g~~~g~~~~~~~~g~~i~~~~~-g~l~~~~~~~~~~~~~~f~~ 462 (534)
.+......++... .. +-+..+........++.++|.+. +..... ..|...|..
T Consensus 385 ~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~-----y~~~~~f~~ 440 (495)
T KOG2533|consen 385 AIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR-----YGWGAVFYM 440 (495)
T ss_pred HHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc-----hhhhhHHHH
Confidence 5555555655443 33 44555555555555555555543 222222 567777733
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=4.3e-33 Score=284.44 Aligned_cols=354 Identities=16% Similarity=0.049 Sum_probs=265.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhhc
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ---AAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~---a~~~~~~~l~~~r~l~G~g~g 173 (534)
+++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. ...++++.+++.|++.|++.+
T Consensus 46 ~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 125 (417)
T PRK10489 46 MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS 125 (417)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 67779999999999999999999999999999999999999998888887665432 123578889999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
...+...+++.|++|+++|+++.++. ...++|..+|+.+++.+.+..+|++.|++.++..++..++. +.+|+.+++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 204 (417)
T PRK10489 126 LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPALPPPPQ 204 (417)
T ss_pred HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCc
Confidence 88899999999999999999999954 78899999999999999998899999998877766655443 34455432211
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
.. +++. ++.+..++.++++|.++...+..++... ......+.|.|+++.+|.++...+++.+..
T Consensus 205 ~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~ 268 (417)
T PRK10489 205 PR-EHPL--------------RSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAV 268 (417)
T ss_pred cc-ccch--------------HHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHH
Confidence 00 0000 1111235567788887666555444332 356677899999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
.++.+++.++.+++.||.++++. ...+.++..+.+..+...+ +.+...+..++.+++.+...+......
T Consensus 269 ~~g~~ig~~~~~~l~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 337 (417)
T PRK10489 269 PLGAALGALTSGWLAHSARPGLL----------MLLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLL 337 (417)
T ss_pred HHHHHHHHHHHHHhhhccCcchH----------HHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998655443 2344444445555444443 444445555555665665556666788
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHH-HHHhhcCCccc
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYF-FYQVLGTSEVQ 483 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~ 483 (534)
.+..|++ ||+++|+.+...++|..++|.+.|.+.+. .++...++..+++.++..+ .....++.+++
T Consensus 338 ~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 338 QTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-----MTPVASASASGFGLLIIGVLLLLVLGELRRF 405 (417)
T ss_pred HhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHhccccccc
Confidence 8888876 99999999999999999999999999998 7777777776665554444 44444544443
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=3.2e-33 Score=291.48 Aligned_cols=368 Identities=17% Similarity=0.179 Sum_probs=288.4
Q ss_pred HHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcc
Q psy14136 18 LYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGE 97 (534)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 97 (534)
.+..++++.++..+|...++.+.|.+ .++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~---------------------------------------------------~~~ 31 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTI---------------------------------------------------AGD 31 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHh
Confidence 44556788999999999999999888 558
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhh
Q psy14136 98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWP 177 (534)
Q Consensus 98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~ 177 (534)
+|.++.+.+|+.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++ ++++.++++|+++|++.+...+
T Consensus 32 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~G~~~~~~~~ 109 (485)
T TIGR00711 32 LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA--PNLELMIIFRVIQGFGGGPLIP 109 (485)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc--CCHHHHHHHHHHHHhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999997655 6899999999999999999999
Q ss_pred hHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccch
Q psy14136 178 AMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITR 256 (534)
Q Consensus 178 ~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~ 256 (534)
...+++.|++|+++|+++++++ .+..+|..+++.+++++.+++|||+.|++.++++++..++.++..|++++......+
T Consensus 110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 189 (485)
T TIGR00711 110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFD 189 (485)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCc
Confidence 9999999999999999999955 788999999999999999999999999999888887777766666664332211110
Q ss_pred hhhh------------hhhhccCcc-----------------------ccCCCCCcccHHHhhcCHHHHHHHHHHHHHHH
Q psy14136 257 KELD------------YIQENIEPT-----------------------IVGSKGLKVPWVSILTSPPAWAIGITTFGRIW 301 (534)
Q Consensus 257 ~~~~------------~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (534)
.... ...+..... ++..++.+....+++++|.++...+..++..+
T Consensus 190 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (485)
T TIGR00711 190 FLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL 269 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHH
Confidence 0000 000000000 00011112223467888998888888888888
Q ss_pred HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381 (534)
Q Consensus 302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (534)
..+....++|.|+++.+|+++.++++...+..++.+++.++.|++.||+++|+.+ .++..+.+++...+.
T Consensus 270 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 270 GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV----------TIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----------HHHHHHHHHHHHHHh
Confidence 8888889999999998999999999999999999999999999999999987652 444555555444444
Q ss_pred h--c-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 382 Y--L-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPN-FAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 382 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+ . ..+.+......++.+++.+...+.......+..|+ ++|++.|+.+....+|+.+|+.+.+.+.+.
T Consensus 340 ~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 340 FTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 12334444555666666666665555555565664 499999999999999999999999998876
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=7.4e-32 Score=273.69 Aligned_cols=356 Identities=16% Similarity=0.158 Sum_probs=262.6
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHhhhhc
Q psy14136 96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AA-VLHYGALIALRSIQGIASG 173 (534)
Q Consensus 96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~-~~~~~~l~~~r~l~G~g~g 173 (534)
+|+|+|+.+.|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++.+ .. .++++.+++.|++.|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 378999999999999999999999999999999999999999999999998766432 12 2478888999999999998
Q ss_pred chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHH-HhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGI-GLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~-~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
...+...+.+.+++|+++|++++|+. .+.++|. ++++.+++.+.+.+||+..+|......++..++.+++.++.++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 88888889999999999999999954 7788886 588999999988889776666554444443444444445432211
Q ss_pred cccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhh
Q psy14136 252 PRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGA 331 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 331 (534)
+.. +++ +.++.+..+++++++|.++...+..++.....+++.++.|.|+++ +|++..+.+.+...
T Consensus 201 ~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~ 265 (402)
T TIGR00897 201 HMQ-TRE-------------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGT 265 (402)
T ss_pred ccc-CCc-------------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHH
Confidence 110 000 001112245678999999988888888888888889999999876 89999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136 332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY-LGCNVALVLITWFVAVTLITASYAGAMA 410 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
..++.+++.+..|++.||+++|+.+. ....+...+..+.+..... ...+.+...+..++.+++.+...+ ...
T Consensus 266 ~~~~~~ig~~~~g~l~dr~~~~~~~~------~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~ 338 (402)
T TIGR00897 266 FFFTNIVFNVIFGIVGDKLGWMNTVR------WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAA 338 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 89999999999999999999876530 0011111111111111111 122333444444444444444333 334
Q ss_pred hhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 411 NVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 411 ~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
...+..|++||++.|+.+....+++.++|.+.|.+.+. .|+...+++.+++.+++.++..+++
T Consensus 339 ~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-----~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 339 VFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-----FGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 55677788899999999999999999999999999998 7899999999888877777665543
No 45
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=3.3e-32 Score=277.98 Aligned_cols=381 Identities=12% Similarity=0.109 Sum_probs=282.4
Q ss_pred CcCCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccc
Q psy14136 7 RFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTML 86 (534)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (534)
|.....+.....+..+++.+++..+++...+...|.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i------------------------------------------- 52 (438)
T PRK10133 16 KDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQF------------------------------------------- 52 (438)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Confidence 3443444455666667788888899999999888887
Q ss_pred cCCCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy14136 87 LEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AAVLHYGALIALR 165 (534)
Q Consensus 87 ~~~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~~~~~~~l~~~r 165 (534)
++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..++++++++.+++.. +.+++++.++++|
T Consensus 53 --------~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r 124 (438)
T PRK10133 53 --------QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGL 124 (438)
T ss_pred --------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 6699999999999999999999999999999999999999999999999999987532 2357899999999
Q ss_pred HHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-----------------h--------
Q psy14136 166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-----------------H-------- 219 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-----------------~-------- 219 (534)
+++|+|.|...+...+++.|+.|+++|.+.++ .+....+|..+++.+++.+.. .
T Consensus 125 ~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~ 204 (438)
T PRK10133 125 FIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSL 204 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHH
Confidence 99999999999999999999887777777788 557888999999988765430 0
Q ss_pred -cCCchhhhhhchhhH-HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136 220 -YGWRSVFYTTGSLGA-IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF 297 (534)
Q Consensus 220 -~gwr~~f~i~~~~~l-i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (534)
.+||++|+....+.. +..++.+...||.+++++ ++. +..+....+++++++|.++...+..+
T Consensus 205 ~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~----~~~------------~~~~~~~~~~~ll~~~~~~~~~l~~~ 268 (438)
T PRK10133 205 VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH----SDA------------KQGSFSASLSRLARIRHWRWAVLAQF 268 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc----ccc------------cccchhhhHHHHHhCchHHHHHHHHH
Confidence 256667764333322 322222222232211100 000 00111234567889999888777777
Q ss_pred HHHHHHHHHHhchhhhh-HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136 298 GRIWVHYIFIIPGPRYM-KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL 376 (534)
Q Consensus 298 ~~~~~~~~~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~ 376 (534)
+..........|.+.|+ ++.+|+++.++++......++.++++++.+++.||+++|+.+ ..+..+..+.
T Consensus 269 ~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~ 338 (438)
T PRK10133 269 CYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHH
Confidence 77778887888889885 566899999999999999999999999999999999998763 2333333333
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-
Q psy14136 377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES- 455 (534)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~- 455 (534)
+++..+.+ +. .....+.+.+++.+..+|...+...+..|++.+.+.++..+ ..+|+.++|.+.|.+.|. .|
T Consensus 339 ~~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~-----~g~ 410 (438)
T PRK10133 339 CLISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA-----AGN 410 (438)
T ss_pred HHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHh-----ccc
Confidence 33333333 22 33455667788889999999999999888878888888864 557889999999999888 55
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy14136 456 WRQVFLIAGAVGSCTYF 472 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~~~ 472 (534)
.+..|++..++.+..+.
T Consensus 411 ~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 411 IPTAELIPALCFAVIFI 427 (438)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 67777765555444333
No 46
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.2e-31 Score=280.95 Aligned_cols=369 Identities=17% Similarity=0.193 Sum_probs=264.6
Q ss_pred CCCCC-CccccCC---hhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 90 PNVNE-EGEFDWD---TTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR 165 (534)
Q Consensus 90 P~~~~-~~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r 165 (534)
+..+. .+|+|++ +.+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++ ++++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence 44454 8899999 9999999999999999999999999999999999999999999999886655 6999999999
Q ss_pred HHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136 166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~ 244 (534)
++.|++.+...+...+++.|++|+++|+++.++. .+..+|.++++.++..+.+ ||+.|++.+++.++..+.. +++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 9999999999999999999999999999999954 6788999999888766543 9999999988877766655 567
Q ss_pred cCCCCCCccc--chhhhhhhh---hc----c-------C-ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q psy14136 245 FDAPLKHPRI--TRKELDYIQ---EN----I-------E-PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI 307 (534)
Q Consensus 245 ~~~p~~~~~~--~~~~~~~~~---~~----~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (534)
||+|+..... .++..+..+ +. . . +++...++.+..+++++++|.++...+......+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 8887532111 011001000 00 0 0 0000011123467889999988766655544433332222
Q ss_pred hchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-
Q psy14136 308 IPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN- 386 (534)
Q Consensus 308 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 386 (534)
..++.++.+ .+.+. .......++..+++.++.+++.||+|||+.+ .++.++.+++++.+.+.+..
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~~~~~~~~~ 409 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLLLLFVPVDL 409 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHcCCCc
Confidence 223333332 34442 2334456778889999999999999998753 44455555555555554422
Q ss_pred hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136 387 VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA 465 (534)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~ 465 (534)
.+......++..++.+..++..+.+..|.+|++ |+++.|+.++...+|++++|.+.+ + +. .++...+++.++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~-----~~~~~~~~~~~~ 482 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GE-----KWLFLPLVLFGG 482 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HH-----HHHhhHHHHHHH
Confidence 234444455555666666777788889999977 999999999999999999999998 3 33 456667777777
Q ss_pred HHHHHHHHHHhhcCCccccC
Q psy14136 466 VGSCTYFFYQVLGTSEVQPW 485 (534)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~ 485 (534)
+.+++.++.++++++++++.
T Consensus 483 ~~~~~~~~~~~lpet~~~~l 502 (505)
T TIGR00898 483 LALLAGILTLFLPETKGVPL 502 (505)
T ss_pred HHHHHHHHHHcCcCCCCCCC
Confidence 77777777777776655443
No 47
>KOG1330|consensus
Probab=100.00 E-value=2e-33 Score=269.75 Aligned_cols=376 Identities=14% Similarity=0.180 Sum_probs=277.7
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136 12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN 91 (534)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 91 (534)
..+.++.+++.++..+++++||..+..+.+++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v------------------------------------------------ 59 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEV------------------------------------------------ 59 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHH------------------------------------------------
Confidence 34445666677999999999999999888777
Q ss_pred CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136 92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA 171 (534)
Q Consensus 92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g 171 (534)
++.||++++..|++.+.+.+.+++++|+.|+++|||.||+++.+|..+|+++.+.+++. ..||+++++|.+.|+|
T Consensus 60 ---~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 ---QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--NHFWQVLLCRGFVGIG 134 (493)
T ss_pred ---HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--HHHHHHHHHHHHhccc
Confidence 77999999999999999999999999999999999999999999999999999998777 5899999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
.+...|+++++++|.+|..+|+++++ ++.+..+|..+|.+.+..+.++.+ |||.|++.++++++..++.+++.+|+++
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 99999999999999999999999999 668999999999999999888765 9999999999999999999999888665
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh---hCCccccch
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI---LGFSIQTNG 326 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~s~~~~~ 326 (534)
......+.+.+. .........+.+.+.+++.+....+......+....+..|.|.++... .|.+..+..
T Consensus 215 ga~~~~~~~~~~--------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ 286 (493)
T KOG1330|consen 215 GARDEVDGENKM--------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATL 286 (493)
T ss_pred ccccccccCCcC--------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccch
Confidence 422111111100 000112223445566667777777777777777777777888776543 345666667
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhhhccc-chhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhc
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIM-SLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 404 (534)
++..+...++.+|.+.+|.++||+.++..- ....+.......+..+....+.+..... .+.+..+++.+++-......
T Consensus 287 ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~ 366 (493)
T KOG1330|consen 287 IFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFN 366 (493)
T ss_pred hhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 777888899999999999999997663221 1111111122222222222222222222 12333344444444444455
Q ss_pred ccccchhhhccCC-CchhHHHHHHhHHHHh-hhhHHhHhhhhcccc
Q psy14136 405 YAGAMANVVDIGP-NFAGPILAFAQTIHMT-ASFLSPMVAGYFLQD 448 (534)
Q Consensus 405 ~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~ 448 (534)
++...-...++.| ++|.++.++...+..+ |.+-+|.+.|.+.|.
T Consensus 367 ~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 367 WATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred cccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 5555555566665 5599999999888765 455566699988876
No 48
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7.4e-33 Score=287.83 Aligned_cols=362 Identities=16% Similarity=0.185 Sum_probs=249.9
Q ss_pred cCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcchhh
Q psy14136 99 DWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQGIASGLTWP 177 (534)
Q Consensus 99 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G~g~g~~~~ 177 (534)
+.+..+.+++.+++.++..+++++.|+++||+|||++++++.++++++.+++.+.. ..+++.++++|+++|++.+...+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 146 (481)
T TIGR00879 67 SYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASA 146 (481)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHh
Confidence 35689999999999999999999999999999999999999999999998875432 23466899999999999999999
Q ss_pred hHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHH---HHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 178 AMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLC---GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 178 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~---~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
...+++.|++|+++|++++++ ..+..+|..+++.++ ..+.+..+||+.|++.++..++. ++..+++||+|+....
T Consensus 147 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~ 225 (481)
T TIGR00879 147 LVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVG 225 (481)
T ss_pred HHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHH
Confidence 999999999999999999995 478899999999998 66667789999999966555544 4445566776532110
Q ss_pred c--chhhhhhhhhccCccc-----------------cCCCCCcccHHHhhc------CHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 254 I--TRKELDYIQENIEPTI-----------------VGSKGLKVPWVSILT------SPPAWAIGITTFGRIWVHYIFII 308 (534)
Q Consensus 254 ~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 308 (534)
. .++..+...+...... .+.+..+..++++++ .+.++...+..+........+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (481)
T TIGR00879 226 KGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMY 305 (481)
T ss_pred cCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHH
Confidence 0 0000000000000000 000000111223332 22333333333333333444556
Q ss_pred chhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh---hcCC
Q psy14136 309 PGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG---YLGC 385 (534)
Q Consensus 309 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 385 (534)
+.|.++++ .|++..+.+.......++.+++.++.+++.||+++|+.+ .++.++.+++++.+. ....
T Consensus 306 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 374 (481)
T TIGR00879 306 YSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFV 374 (481)
T ss_pred HHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhccc
Confidence 67777665 799988888888899999999999999999999988753 333334344333333 1111
Q ss_pred c------hhHHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHH
Q psy14136 386 N------VALVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWR 457 (534)
Q Consensus 386 ~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 457 (534)
. .........+...+.+ ...+.......|..|++ |+++.|+.+...++|++++|.+.+.+.+. .+|.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-----~~~~ 449 (481)
T TIGR00879 375 TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-----IGVG 449 (481)
T ss_pred CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCcc
Confidence 1 2222222222223333 33455566778888876 99999999999999999999999999888 6788
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy14136 458 QVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 458 ~~f~~~~~~~~~~~~~~~~~ 477 (534)
..|++.++++++++++.+++
T Consensus 450 ~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred ceehhHHHHHHHHHHHHhee
Confidence 88888888877777665544
No 49
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=3.2e-33 Score=278.69 Aligned_cols=325 Identities=25% Similarity=0.386 Sum_probs=250.7
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|.|+.+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++.|++.+.
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--SNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--hhHHHHhhhcccccccccc
Confidence 45899999999999999999999999999999999999999999999999996665443 5777999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|+++++ ...+.++|.++++.+++.+.+.++||+.|++.+++.++..++..++.++++++++.
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 181 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRER 181 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccc
Confidence 99999999999999999999999 55789999999999999999889999999999999888877554555555444332
Q ss_pred cchhhhhhhhhccCccccCCCCCcc-cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc-cccchhHhhh
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKV-PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS-IQTNGLLTGA 331 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-~~~~~~~~~~ 331 (534)
.++++.+. +.++... .++.++++|.+|......++..........+.|.|+++.+|.+ ..+.+.+...
T Consensus 182 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (352)
T PF07690_consen 182 ESPKESES----------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSI 251 (352)
T ss_dssp -SSTTTT------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHH
T ss_pred cccccccc----------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHH
Confidence 22222100 0011111 3566777777775666666666677788999999988889999 7889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136 332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN 411 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
..+.++++.++.+++.||+++++.. ........+..+.+......+ +..+.....++.+++.+...+.....
T Consensus 252 ~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 323 (352)
T PF07690_consen 252 FGIVGIIGSLLAGRLSDRFGRRRRL-------LIAILLLILGALGLLLLPFSS-SPVWLIIALFLIGFGFGIVFPILFSL 323 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHH-------HHHHHHHHHHHHHHCCSHHHC-HHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHH-------HHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876542 111222222222222222222 34455556666777888888889999
Q ss_pred hhccCCCc-hhHHHHHHhHHHHhhhhHHh
Q psy14136 412 VVDIGPNF-AGPILAFAQTIHMTASFLSP 439 (534)
Q Consensus 412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~ 439 (534)
..+..|++ +|++.|+.+...++++.++|
T Consensus 324 ~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 324 IQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998865 99999999999999999987
No 50
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=270.08 Aligned_cols=323 Identities=16% Similarity=0.199 Sum_probs=249.2
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+++++.|++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|+++|++.+.
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~ 110 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV--ESAAQLLVLRFVQAVGVCS 110 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHhhhHH
Confidence 55899999999999999999999999999999999999999999999999988886554 6899999999999999888
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|++++++..+ ......+|..++|.+++++.+.+|||+.|++.+++.++..+..++. ++++++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 188 (401)
T PRK11043 111 AAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KPSKKARK- 188 (401)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCCCCccc-
Confidence 88888999999999999999888 5577889999999999999999999999999888877766555444 33322111
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+ ++.+.++++++++|+++...+...+.......+..+.|.++++ +|++..+.++......
T Consensus 189 --~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~ 248 (401)
T PRK11043 189 --Q-----------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQT 248 (401)
T ss_pred --c-----------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHH
Confidence 0 0112246778888888876666666666667777888998876 7999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY-LGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++.+++.++.+++.||+++|+.+. ...+...+..+.+..... ...+.+.......+.+++.+...+......
T Consensus 249 ~~~~~g~~~~~~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
T PRK11043 249 IAFLVGGYGCRAALQKWGGEQLLP-------WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQA 321 (401)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHH-------HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998876431 111122222222222222 122333344444555666666677666666
Q ss_pred hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.+..|+++|++.|+.+.....++..++.+.|.+.+.
T Consensus 322 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 322 LRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred hhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 676787899999999999999999999999999876
No 51
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.1e-32 Score=274.12 Aligned_cols=332 Identities=16% Similarity=0.103 Sum_probs=260.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL---HYGALIALRSIQGIA 171 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~---~~~~l~~~r~l~G~g 171 (534)
..+++.++.+.|++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.+++... +++.+++.|++.|++
T Consensus 26 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 105 (365)
T TIGR00900 26 VLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIA 105 (365)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 33778899999999999999999999999999999999999999999998888876554211 899999999999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
.+...+...+++.|++|+++|++++++ ..+..+|.++++.+++.+.+..|||+.|++.++..++..+..+...++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (365)
T TIGR00900 106 QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA 185 (365)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC
Confidence 999999999999999999999999995 4788999999999999999999999999988776666554444332222111
Q ss_pred CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hchhhhhHhhhCCccccchhHh
Q psy14136 251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI-IPGPRYMKTILGFSIQTNGLLT 329 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~s~~~~~~~~ 329 (534)
+++.+.++ +. .++....++.++++|.++...+..+.......... .+.|.|.++.+|.+..+.+.+.
T Consensus 186 ~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (365)
T TIGR00900 186 SEIQALSN-AV-----------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVL 253 (365)
T ss_pred ccccccch-hH-----------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHH
Confidence 11110000 00 01112245678889999888887777777776666 7889999887899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136 330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM 409 (534)
Q Consensus 330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
....++.+++.++.+++.||.++++.+ ..+..+.++.+....+.+.+.+...+..++.+++.+...+...
T Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 323 (365)
T TIGR00900 254 AAFGLGALLGALLLGLLGRYFKRMALM----------TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQG 323 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhHHH----------HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887643 3334444444554444432245555666666777777777788
Q ss_pred hhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 410 ANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 410 ~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
....+..|++ |+++.|+.+...+++..++|.+.|.+.|.
T Consensus 324 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 324 TLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888866 99999999999999999999999998876
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.3e-31 Score=269.92 Aligned_cols=330 Identities=17% Similarity=0.235 Sum_probs=250.9
Q ss_pred cCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 87 LEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR 165 (534)
Q Consensus 87 ~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r 165 (534)
++.|.+|. .+++|+|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+. ++++.+++.|
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~ 86 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQLIYMR 86 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHH
Confidence 44577777 78899999999999999999999999999999999999999999999999999886554 6899999999
Q ss_pred HHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136 166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~ 244 (534)
++.|++.+...+...+++.|++|+++|+++++ .+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++..+..
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFI 166 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999 45788999999999999999999999999998888877766666666
Q ss_pred cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT 324 (534)
Q Consensus 245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 324 (534)
||+++++++.+.+ .++...++++.+++|.++...+..++.......+..+.|.++.+.+|+++.+
T Consensus 167 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 167 PETLPKERRQPFH---------------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred CccCcccccCCCC---------------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 6654322110000 0011224567888998888777777777777777888888888888999999
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH---HHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV---IPALLVMLIGYLGCNVALVLITWFVAVTLI 401 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (534)
.+.+.....++.+++.++.+++.||+++|+.+ ..+.. +.++.+......+...+...+.......+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGALNML----------RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV 301 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998753 22222 122222222222223333333333333333
Q ss_pred hhcccccchhhhccCCCchhHHHHHHhHHHH-hhhhHHhHhhh
Q psy14136 402 TASYAGAMANVVDIGPNFAGPILAFAQTIHM-TASFLSPMVAG 443 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~-~g~~i~~~~~g 443 (534)
+...........+..|+++|++.++.+.... +|..+++.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 302 SMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444556677778779999999887654 55566665543
No 53
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.4e-31 Score=267.49 Aligned_cols=338 Identities=16% Similarity=0.123 Sum_probs=245.2
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------AVLHYGALIALRSIQ 168 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------~~~~~~~l~~~r~l~ 168 (534)
++++|+|+.++|++.+++.+++.+++++.|+++||+||||+++.+.++.+++.+..... ..++++.++++|+++
T Consensus 43 ~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (392)
T PRK12382 43 HHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLIL 122 (392)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999988877765432111 135789999999999
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
|++.+...+...+++.|++|+++|+++++++ .+...|..+++++++++.+.+|||+.+.+..++.++.. .+.++.
T Consensus 123 G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~ 198 (392)
T PRK12382 123 GFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTV 198 (392)
T ss_pred HHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhc
Confidence 9999999999999999999999999999954 67889999999999999998999988766544433222 122222
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
|+.+++. ++ + .+.++.++ .++...+..++..........+.|.|+++ .|++ ..+.
T Consensus 199 ~~~~~~~--~~---------------~---~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~ 253 (392)
T PRK12382 199 RKVPAHA--GE---------------R---PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGF 253 (392)
T ss_pred cCCCCCc--cc---------------C---chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHH
Confidence 2211100 00 0 01122221 12222222233334455566778888876 4654 3456
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
......++.+++.++.|++.||+++|+.+ ..+..+..+....+...+ +.+......++.+++.+...+.
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~ 322 (392)
T PRK12382 254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVA----------IVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFPA 322 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeh----------HHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHHH
Confidence 66667788889999999999999998764 344444444444444444 4444455555556666666666
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
......+..|++ ||++.|+.+....+|..++|.+.|.+.|. .+|+..|++.+++.+++.++.+..
T Consensus 323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 323 LGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHhh
Confidence 666666766654 99999999999999999999999999998 789999999998888777766544
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=6.8e-32 Score=273.77 Aligned_cols=370 Identities=21% Similarity=0.259 Sum_probs=276.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCC
Q psy14136 11 AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKP 90 (534)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 90 (534)
..+++|..+..+++.++...++....+...|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 43 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAI----------------------------------------------- 43 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-----------------------------------------------
Confidence 345566677777778888888888888888877
Q ss_pred CCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 91 NVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI 170 (534)
Q Consensus 91 ~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~ 170 (534)
.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++.|+
T Consensus 44 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 117 (398)
T TIGR00895 44 ----SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA--TNVTQLLILRFLAGL 117 (398)
T ss_pred ----hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHhc
Confidence 45889999999999999999999999999999999999999999999999988886554 689999999999999
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
+.+...+...+++.|++|+++|++++++. .+..+|..+++.+++.+.+..|||+.|++.+++.++..++.++++||+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 99999999999999999999999999954 78899999999999999999999999999877777766666777777654
Q ss_pred CCcccchhhhh----hhhhcc--------CccccCCCCCcccHHHhhcC---HHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136 250 KHPRITRKELD----YIQENI--------EPTIVGSKGLKVPWVSILTS---PPAWAIGITTFGRIWVHYIFIIPGPRYM 314 (534)
Q Consensus 250 ~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (534)
...+.++++.+ +..... .+++.+.+..+..++.++++ +..+...+..++..........+.|.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
T TIGR00895 198 FLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM 277 (398)
T ss_pred HHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111110 000000 00000001111112223332 3344555555566666777778888554
Q ss_pred HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q psy14136 315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW 394 (534)
Q Consensus 315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (534)
+ .+|.+..+.+.......++.+++.++.+++.||+++|+. .....+.++....+.....+........
T Consensus 278 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (398)
T TIGR00895 278 V-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-----------ALLLLLGAVFAVLVGSTLFSPTLLLLLG 345 (398)
T ss_pred H-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-----------HHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 4 589999999999999999999999999999999998732 1222222222222222122455555666
Q ss_pred HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
++.+++.+...+.......+..|++ |+++.|+.+.+..+|..++|.+.|++
T Consensus 346 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 346 AIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 6677777777888888899998866 99999999999999999999999876
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.8e-31 Score=271.95 Aligned_cols=345 Identities=19% Similarity=0.201 Sum_probs=254.7
Q ss_pred ccccCChhh-----HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 96 GEFDWDTTT-----QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI 170 (534)
Q Consensus 96 ~~~~~s~~~-----~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~ 170 (534)
+++|++..+ .|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+. ++++.+++.|++.|+
T Consensus 42 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 119 (408)
T PRK09874 42 EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA--QNIWQFLILRALLGL 119 (408)
T ss_pred HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHH
Confidence 367776544 5899999999999999999999999999999999999999988875544 689999999999999
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
+.+ ..+....++.+++|+++|++++++ ..+..+|..+++.+++.+.+..+||+.|++.+++.++..+..+++.||+++
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (408)
T PRK09874 120 LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ 198 (408)
T ss_pred hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 865 568888899999999999999994 477889999999999999998999999999988877777766666666532
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhchhhhhHhhhCCccc---cc
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAI-GITTFGRIWVHYIFIIPGPRYMKTILGFSIQ---TN 325 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~ 325 (534)
+.++.++.+ ..+..+.+++|+++.. ....+........+..+.+.|..+..+.... ..
T Consensus 199 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (408)
T PRK09874 199 PVSKKEMLH------------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFIS 260 (408)
T ss_pred cccchhhhH------------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 211110000 0112334556655443 2333334444455566778888774332221 23
Q ss_pred hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136 326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASY 405 (534)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (534)
+.+....+++.+++.+..|++.||+++|+.+ ..+..+..+..+.....+ +.+...+..++.+++.+...
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 329 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKIL----------ITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAADGALL 329 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhHhhH
Confidence 4555666788888999999999999988763 334444444444444443 45555555556666667666
Q ss_pred cccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 406 AGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 406 ~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+.......+..|++ +|+.+++.+....+|..++|.+.|.+.+. .+|+..|++.+++.+++.+..+..
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 330 PAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----YGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----cchhHHHHHHHHHHHHHHHHHHHH
Confidence 66666767766655 99999999999999999999999999988 789999999998888877766554
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=2.2e-30 Score=262.59 Aligned_cols=324 Identities=18% Similarity=0.177 Sum_probs=252.8
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++.+. ++++.+++.|++.|++.+.
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~g~~~~~ 112 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA--HSLTVLIAASAIQGLGTGV 112 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHhhhhH
Confidence 55899999999999999999999999999999999999999999999999998886554 6899999999999999998
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+....++.|++++++|+++.+.+ .+..+|..++|.+++.+.+..|||+.|++.+++.++..+...++.||+++.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (394)
T PRK11652 113 GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADAR 192 (394)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccc
Confidence 8899999999999999999999954 678899999999999999889999999998877776665555566665432211
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
. + +.+..+++++++|+++...+..+........+..+.+.++++.+|.+..+.+++.....
T Consensus 193 ~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 253 (394)
T PRK11652 193 R--T-----------------RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPI 253 (394)
T ss_pred h--h-----------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHH
Confidence 0 0 01234667888888887666666666666666777888998888999999898888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++.+++.++.+++.||.+++.. ....+..+..+.+...... ..+.+......++.+++.+...+......
T Consensus 254 ~~~~~g~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 324 (394)
T PRK11652 254 PAAFFGAWFAGRPNKRFSTLMW---------QSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGA 324 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999998874321 1122222222222222221 12344455555666677777788888888
Q ss_pred hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.+..|+++|++.++.+....+|+.+++.+.+.+.+.
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 325 MEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 888888899999999999999999999999988766
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.8e-30 Score=263.03 Aligned_cols=317 Identities=16% Similarity=0.134 Sum_probs=230.8
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|.|..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++ ++++.+++.|+++|++.+.
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~g~~~~~ 107 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA--ETSSLFLAGRFLQGIGAGC 107 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhhhH
Confidence 55899999999999999999999999999999999999999999999999998886554 6889999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|+++.+ ......+|..++|.+++.+.+..|||+.|++.+++.++..++.++..||+++++++
T Consensus 108 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 187 (392)
T PRK10473 108 CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAP 187 (392)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999999 45677889999999999888888999999999888887777766666665432111
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
.+ .......++.+++|+++...+...+.......+..+.|.++++.+|++..+.+.+.....
T Consensus 188 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 249 (392)
T PRK10473 188 AA------------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTA 249 (392)
T ss_pred Cc------------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHH
Confidence 00 001123456778888776665555555555566677788888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
++.+++.++.+++.||+++|+.+ .++..+..+....+.... ..........+...+.+...+. ....
T Consensus 250 ~~~i~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~--~~~~ 316 (392)
T PRK10473 250 GVSMTVSFSTPFALGIFKPRTLM----------LTSQVLFLAAGITLALSP-SHAVSLFGITLICAGFSVGFGV--AMSQ 316 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHH--HHHH
Confidence 99999999999999999988653 344444444444333332 2222222222323333332222 2233
Q ss_pred ccCCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 414 DIGPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 414 ~~~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+..|.+ .|.+.++. .++..+++.+.+++.+.
T Consensus 317 ~~~~~~~~~g~~~~~~----~~~~~~g~~~~~~l~~~ 349 (392)
T PRK10473 317 ALGPFSLRAGVASSTL----GIAQVCGSSLWIWLAAV 349 (392)
T ss_pred HhccCcccccHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 344432 44444444 45555666666666665
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=2.7e-31 Score=266.52 Aligned_cols=345 Identities=17% Similarity=0.210 Sum_probs=256.5
Q ss_pred HHHHHHHHHHHhhhcccEEEee-eecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcccc
Q psy14136 21 MSFTGFLVSFMMRTDINIAMVA-MVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFD 99 (534)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~ 99 (534)
..++++++.+.++..++...|. + ++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~~ 33 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMI---------------------------------------------------KDDLG 33 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHH---------------------------------------------------HHHhC
Confidence 3577788888899888888885 5 55999
Q ss_pred CChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchhhh
Q psy14136 100 WDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-HYGALIALRSIQGIASGLTWPA 178 (534)
Q Consensus 100 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-~~~~l~~~r~l~G~g~g~~~~~ 178 (534)
+|+.+.+++.+++.+++++++++.|+++||+|||++++++.++.+++.++++++ + +++.+++.|+++|++.+ ..+.
T Consensus 34 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~g~~~~-~~~~ 110 (366)
T TIGR00886 34 LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--VQSYSVLLLLRLFIGIAGG-SFAS 110 (366)
T ss_pred CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhch-hhHh
Confidence 999999999999999999999999999999999999999999999999886655 6 89999999999999965 4567
Q ss_pred HHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh----------hcCCchhh-hhhchhhHHHHHHhhhhccC
Q psy14136 179 MYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA----------HYGWRSVF-YTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 179 ~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~----------~~gwr~~f-~i~~~~~li~~i~~~~~~~~ 246 (534)
..+++.|++|+++|+++++++ ...++|..+++.+++.+.. +.+||+.| +..+++..+..++.+.+.+|
T Consensus 111 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 111 CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999955 5677788777777766654 24899999 44455555555555556666
Q ss_pred CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136 247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG 326 (534)
Q Consensus 247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 326 (534)
.|+++++.++.+.+ +.... ..+......++.+++|+++...+..++.......+..+.|.|+++.+|.++.+++
T Consensus 191 ~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 264 (366)
T TIGR00886 191 TPPGKPATGKLSFK---GARWS---VGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAG 264 (366)
T ss_pred CCcccccchhcccc---ccccc---ccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 55432211110000 00000 0011112456788889998888887777777788889999999998999999999
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh--hcCC-chhHHHHHHHHHHHHhhh
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG--YLGC-NVALVLITWFVAVTLITA 403 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~ 403 (534)
.+.....+.+++++++.|++.||+++|+.+ ..+......+..++. .... +.........+...+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (366)
T TIGR00886 265 AYASLGGLLGSLARPLGGAISDRLGGARKL----------LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGA 334 (366)
T ss_pred HHHHHHHHHHHHHhhccchHHHhhccchhH----------HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcc
Confidence 999899999999999999999999998653 222222222222222 2211 333344444555566666
Q ss_pred cccccchhhhccCCCchhHHHHHHhHHHHhhh
Q psy14136 404 SYAGAMANVVDIGPNFAGPILAFAQTIHMTAS 435 (534)
Q Consensus 404 ~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~ 435 (534)
..+.......+..|+++|+++|+.+..+++|+
T Consensus 335 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 335 GNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred ccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 66777788888889889999999999888763
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.98 E-value=1.2e-30 Score=263.13 Aligned_cols=335 Identities=15% Similarity=0.085 Sum_probs=244.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++ ++++.++++|+++|++.+.
T Consensus 33 ~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~ 110 (381)
T PRK03633 33 LAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM--VGFWSWLAWRFVAGIGCAM 110 (381)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999886654 6899999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+.+.+..++++|+++++. ..+.++|..+|+.+++.+.+...|...+ ..+........ .+ +.+.++++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~- 186 (381)
T PRK03633 111 IWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-VTGLVLAAILP-LL-FTRILNQQAE- 186 (381)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-HHHHHHHHHHH-HH-HhcccCCCCC-
Confidence 999988888999999999999994 5789999999999999987764343333 32222222111 11 2122111100
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+++..++++.+++|.++......+...........++|.|+++ .|.+....+.+.+...
T Consensus 187 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~ 245 (381)
T PRK03633 187 --------------------NHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLV 245 (381)
T ss_pred --------------------CCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 0011234567788877765544444444555666788999987 6999888999989999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
++.+++++..|++.||+++|+.+ ..+..+..++...+. . .... .....+.+.+.....+.......
T Consensus 246 ~~~~~~~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~--~-~~~~-~~~~~l~g~~~~~~~p~~~~~~~ 311 (381)
T PRK03633 246 SAGILGQWPIGRLADRFGRLLVL----------RVQVFVVILGSIAML--S-QAAM-APALFILGAAGFTLYPVAMAWAC 311 (381)
T ss_pred HHHHHHHhhhHHHHHHcCcHHHH----------HHHHHHHHHHHHHHh--h-hHHH-HHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999998653 233333333322221 1 1111 12223333333445566667777
Q ss_pred ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
+..|++ ++...+..+...++|..++|.+.|++.|. .+++..|++.+.+.++..+..+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 312 EKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-----YSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCccHHHHHHHHHHHHHHHHHH
Confidence 777654 77788888888899999999999999998 7888888888777765554433
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.98 E-value=2.7e-30 Score=261.56 Aligned_cols=345 Identities=16% Similarity=0.140 Sum_probs=254.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|+.++|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++++. ++++.+++.|+++|++.+.
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~~~ 115 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--HEPWLLWLSCILSGLGGTL 115 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999886554 6899999999999999998
Q ss_pred hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|++++++ ....++|..+||++++++. .+|||+.|++.++..++..++..+..||.++++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~- 193 (400)
T PRK11646 116 FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV- 193 (400)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccccc-
Confidence 899999999999999999999995 4789999999999999998 6799999999887777766555555554211100
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
+ ++.+.++++++++|+++...+..+...........+.|.|+++..+ ++.+.+.+.+...
T Consensus 194 --~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~ 253 (400)
T PRK11646 194 --R-----------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEA 253 (400)
T ss_pred --c-----------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHH
Confidence 0 0112246678888888766665555444444456788999988544 6677888877777
Q ss_pred HHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 334 LCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++...+....+++.|| .+.++. ...+.++.++....+...+ +.+.......+.+.+.+...+......
T Consensus 254 ~~~~~~~~~~~~~~~~r~~~~~~----------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~~ 322 (400)
T PRK11646 254 CLSLTLLYPIARWSEKRFRLEHR----------LMAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETLS 322 (400)
T ss_pred HHHHHHHHHHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 7666655555666554 443322 2344444455555554444 444444444445555566667777888
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
.+..|++ +|+++|+.+....+|..+||.+.|.+.|..+ +.......++..+++.+++.+...
T Consensus 323 ~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 323 ASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK-ALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh-hcCCcchHHHHHHHHHHHHHHHHH
Confidence 8888755 9999999999999999999999999998811 112244566665665555554433
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=2e-30 Score=261.93 Aligned_cols=345 Identities=12% Similarity=0.039 Sum_probs=249.8
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
+++.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.++++++++++ .+. ++.|+++|++.+...
T Consensus 32 ~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~--~~~---~~~r~l~G~~~a~~~ 106 (393)
T PRK11195 32 ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG--IHP---LLAYGLVGIGAAAYS 106 (393)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH--HHH---HHHHHHHHHHHHHHH
Confidence 788889999999999999999999999999999999999999999999988876554 343 788999999999999
Q ss_pred hhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccc
Q psy14136 177 PAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT 255 (534)
Q Consensus 177 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~ 255 (534)
|+..+++.|++|+++|++++++ .....+|.++||.+++++.+. .|+..+.+.+...++. ++..+.+||+|++++..+
T Consensus 107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~ 184 (393)
T PRK11195 107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS 184 (393)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC
Confidence 9999999999999999999995 467889999999999999885 4777777766554433 334455676543322111
Q ss_pred hhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHH
Q psy14136 256 RKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLC 335 (534)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~ 335 (534)
.++....+ .....++.++++|.+........+............|.|+++.+|.++.+.|++.....++
T Consensus 185 ~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g 253 (393)
T PRK11195 185 WNPIALLR-----------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIG 253 (393)
T ss_pred CCHHHHHH-----------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Confidence 11100000 0011245677888776555554444555556666778888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhcc
Q psy14136 336 SYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDI 415 (534)
Q Consensus 336 ~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.++++++.+++.||.++++.. ..+.. .++..+.+...+ +.+......++.+++.+...+...+..++.
T Consensus 254 ~i~g~~~~~~l~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~ 321 (393)
T PRK11195 254 IAVGAGAAARLVTLETVLRVL----------PAGIL-MGLVVLLMALQH-SLLPAYPLLILIGALGGFFVVPMNALLQHR 321 (393)
T ss_pred HHHHHHHHHHHhcCCcccchH----------HHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHHhhhhhhhhHHHHHHhh
Confidence 999999999999987776542 23322 223333333333 444444555556666666666677777777
Q ss_pred CCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 416 GPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 416 ~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.|++ +|++.++.+...+++..++..+.+.+ +. .+.+..+++.+...+++..+.+.+
T Consensus 322 ~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 322 GHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VK-----LGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred CcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HH-----cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7764 69999999999999999999999866 44 355555555554444544444444
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=2.3e-30 Score=257.66 Aligned_cols=322 Identities=26% Similarity=0.407 Sum_probs=280.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.+++.+. ++++.+++.|++.|++.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~ 103 (352)
T cd06174 26 AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA--SSLWLLLVGRFLLGLGGGA 103 (352)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHccccc
Confidence 34778899999999999999999999999999999999999999999999999886555 6899999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...+++.|++|+++|++.++ ......+|..+++.+++.+.+..+||+.|++.+++.++..+...+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 174 (352)
T cd06174 104 LYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L-------- 174 (352)
T ss_pred ccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H--------
Confidence 99999999999999999999999 5578999999999999999999999999999988877766655443 2
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF 333 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 333 (534)
|.++...+..++..........+.|.+..+.+|.+..+.+.......
T Consensus 175 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
T cd06174 175 ---------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFG 221 (352)
T ss_pred ---------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 45677777888888888889999999999877999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 334 LCSYLSSVLFCYLADQLFVRN-IMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 334 ~~~~~~~~~~g~l~dr~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++..++.++.+++.||+++|+ . ...+..+..++.......+ +.+......++.+++.+...+......
T Consensus 222 ~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 290 (352)
T cd06174 222 LGGILGALLGGLLSDRLGRRRLL----------LLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLA 290 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 999999999999999999987 4 3455666666666666555 566667777777888888888889999
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.+..|++ |++.+|+.+....++..++|.+.|.+.+. .+|+..+++.+++.+++.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 291 SELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchHHHHHHHHHHHHHHHhee
Confidence 9998855 99999999999999999999999999988 78999999998888877766543
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.98 E-value=1e-29 Score=257.22 Aligned_cols=344 Identities=16% Similarity=0.143 Sum_probs=240.2
Q ss_pred CccccCChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVF-GFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l-~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
++++|+|++++|++.+...+ ++.++.+++|+ +||+||||.+ ..+.++.+++..+.+++ ++++.+++.+.+.|...
T Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~ 119 (393)
T PRK15011 43 TDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN--RNYFVLLFVGVFLSSFG 119 (393)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHH
Confidence 45899999999999876655 66666655566 9999999875 45566666766664444 67888766665555555
Q ss_pred cchhhhHHHHHhcccCCCcch--hhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNERS--RFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~--~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
+...|...+++.++.++++|. ...+ ...+.++|.+++|++++++.+++|||..|++.+++.++..+..++.+||.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 120 STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 677889999999988766553 3345 3467899999999999999999999999999988888877777777777654
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT 329 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 329 (534)
+++..+ ++. + ..++ +.+..+...............+..+.|.|+++.+|++..+.+.+.
T Consensus 200 ~~~~~~-~~~--------------~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~ 258 (393)
T PRK15011 200 ELPLAT-GTL--------------E----APRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMM 258 (393)
T ss_pred CCcccc-ccc--------------c----cccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 322110 000 0 0000 011222233333334445555667899999888899999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136 330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM 409 (534)
Q Consensus 330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
+...++.+++.++.|+++||+++|+.+ ..+.....+.+......+ +.+......++.++..+...+...
T Consensus 259 ~~~~~~~i~~~~~~G~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 259 GTAAGLEIPTMLIAGYFAKRLGKRFLM----------RVAAVAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGM 327 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887788889999999999999998643 222222222222222233 344334444444444444444455
Q ss_pred hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 410 ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
....|..|+++|+++++.+...++|..++|.+.|.+.|. .+|+..|++.+++.+++.+..+..+
T Consensus 328 ~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 328 LYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----WNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 667788898899999999999999999999999999998 7899999988888887777766554
No 64
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=5.4e-30 Score=258.95 Aligned_cols=342 Identities=11% Similarity=0.070 Sum_probs=257.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|+.++|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+++ ++++.++++|++.|.+.+.
T Consensus 35 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~ 112 (395)
T PRK10054 35 SRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV--NNVTLVVLFFALINCAYSV 112 (395)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999998888876554 6888888899999988888
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
..+...++..|.+|+++|+++++ .+...++|.+++|++++++.+ .+||.+|++.+++.++..++..+.+|++++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~ 191 (395)
T PRK10054 113 FSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT 191 (395)
T ss_pred HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 88899999999999999999999 557889999999999998875 7999999998887777665555555543221110
Q ss_pred cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCccccchhHhhh
Q psy14136 254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGA 331 (534)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~ 331 (534)
++. .....++.+|+|+++...+..++..+....+..+.+.|+... .+.+....+.+...
T Consensus 192 ---~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 252 (395)
T PRK10054 192 ---ETG----------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPV 252 (395)
T ss_pred ---chh----------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHh
Confidence 000 001235678889988888777777777666666777777543 34455566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136 332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN 411 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
..+......+..|++.||.++|+.+ ..++.+..+.+..+.....+.+...+...+.+.+.+...+.....
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 322 (395)
T PRK10054 253 NAAMVVSLQYSVGRRLNAANIRPLM----------TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML 322 (395)
T ss_pred hhhheeeehhHHHHHHccCCchhHH----------HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 7777777788889999998877642 344444455444444333244444455556666666666677777
Q ss_pred hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
+.+..|++ ++++.+..+ ...+|..+||.+.|.+.|. .++...|++.+.+..++.++.
T Consensus 323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-----LPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-----cChhhHHHHHHHHHHHHHHHH
Confidence 88888866 999988655 5668999999999999999 788888877666655544433
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=9.9e-30 Score=263.44 Aligned_cols=350 Identities=15% Similarity=0.150 Sum_probs=256.5
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCeeh-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKTV-FGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQG 169 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G 169 (534)
+.|.|..++|.+ +...+.+ ++.+++|+++||+ ||||. +..+.+..+++.+++++.. ..+++.+.+.+++.|
T Consensus 41 ~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~ 118 (491)
T PRK11010 41 VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIA 118 (491)
T ss_pred hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 668899999997 4444444 5889999999999 99985 6677777777766655542 246888999999999
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-hcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
++.+...+...+++.|++|+++|+++.++. .+..+|.++++.++.++.+ .+|||..|++.+++.++..+..+ +.||+
T Consensus 119 ~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~ 197 (491)
T PRK11010 119 FCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPEP 197 (491)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence 999999999999999999999999999954 7889999999999999988 57999999999888777655444 35665
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
++..+. ++.. +++...+++++++++..|...+..++..........+.+.|+.+..|++..+.+.
T Consensus 198 ~~~~~~---~~~~------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~ 262 (491)
T PRK11010 198 TDTIPV---PKTL------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGL 262 (491)
T ss_pred cccccc---ccch------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 432110 0000 0011224667787777776666666666666666778888887778999999999
Q ss_pred Hhh-hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH---HHHHHhhcCCchhHHHHHHHHHHHHhhh
Q psy14136 328 LTG-APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL---LVMLIGYLGCNVALVLITWFVAVTLITA 403 (534)
Q Consensus 328 ~~~-~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (534)
+.. ...++.+++.++.|++.||+++|+.+ .++.++.++ .+..+.....+........++..+..+.
T Consensus 263 ~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 263 VNKTLGLLATIVGALYGGILMQRLSLFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 874 55679999999999999999987643 122222121 2222223222333333334443334444
Q ss_pred cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 404 SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 404 ~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
..+...+...+..+++ +++..|+.+....+|..+++.+.|.+.|. .||+..|.+.+++.+.+.+.....++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----HGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555667777777776 99999999999999999999999999998 78999999999988888777766644
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=2.1e-29 Score=253.91 Aligned_cols=337 Identities=13% Similarity=0.083 Sum_probs=259.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVF----GFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI 170 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l----~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~ 170 (534)
.+++|+|..++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ .++ ..+++++.+++.|+++|.
T Consensus 31 l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~--~~~~~~~~l~~~~~l~~~ 106 (382)
T TIGR00902 31 LKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFS--AGAHNAWLLFIAIGLFAL 106 (382)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHH--HhhhhHHHHHHHHHHHHH
Confidence 448899999999999999999999999999999999985433 222222222 122 234689999999999999
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
+.+...|...+++.++ +++|++..+ .....++|.++++++++.+.+++|||..|++.++..++ .+..+. .+++++
T Consensus 107 ~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~-~~~~~~ 182 (382)
T TIGR00902 107 FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFL-IKPTIP 182 (382)
T ss_pred HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHH-cCCCCC
Confidence 9998999999988765 478899999 56888999999999999999999999999887654332 223333 333221
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT 329 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 329 (534)
++++. ++. +.+...+.++++|+|++|...+..++.......+..+.|.|+++ .|.+..+.+.+.
T Consensus 183 ~~~~~--~~~-------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~ 246 (382)
T TIGR00902 183 PKDAI--PED-------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLW 246 (382)
T ss_pred CCccc--ccc-------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHH
Confidence 11110 000 01112346789999999999998888888888899999999987 899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136 330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM 409 (534)
Q Consensus 330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
....++.+++.++.+++.||+++|+.+ .++.++..+....+.+.+ +.+..+...++-++..+...+...
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLL----------LISAIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHH----------HHHHHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998999999999999999999988753 567777777777666655 666677777888888888888888
Q ss_pred hhhhccCCCc-hhHHHHHHhH-HHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 410 ANVVDIGPNF-AGPILAFAQT-IHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 410 ~~~~~~~p~~-~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
.++.+. |++ ++++.++++. ...+|..++|.+.|++.|. .++ ..|+..+++.+++.++
T Consensus 316 ~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-----~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 316 RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-----LGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHHHH
Confidence 888887 654 9999999874 5678999999999999999 665 6677777776655443
No 67
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.1e-29 Score=255.17 Aligned_cols=343 Identities=12% Similarity=0.090 Sum_probs=251.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G~g~g 173 (534)
++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..++++++++.+++..+. .++++.+++.|++.|+|.|
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 669999999999999999999999999999999999999999999999999988854332 3579999999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh--------------------------hcCCchhh
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA--------------------------HYGWRSVF 226 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~--------------------------~~gwr~~f 226 (534)
...+....++.++.|+++|++.++ .+...++|..+++.+++.+.. ..+||++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f 189 (410)
T TIGR00885 110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY 189 (410)
T ss_pred HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 557889999999999887742 24699999
Q ss_pred hhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q psy14136 227 YTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306 (534)
Q Consensus 227 ~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (534)
++.+++.++..++.. +.+ .|+.++. ++++ .+.....++++|+|+++...+..+++.......
T Consensus 190 l~~a~~~~~~~~~~~-~~~-~p~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~ 251 (410)
T TIGR00885 190 MIIGAVVLAVALLIM-LTK-MPALNHS--DAKQ--------------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMC 251 (410)
T ss_pred HHHHHHHHHHHHHHH-Hhc-CCCCCcc--cccc--------------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 998887776544433 222 2221110 0000 011123457889999998888888888888788
Q ss_pred HhchhhhhHhhh-CCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 307 IIPGPRYMKTIL-GFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC 385 (534)
Q Consensus 307 ~~~~~~~l~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (534)
.++++.|.++.. +.+....+...+.......+++++++++.||+++|+.+ .++.++..+..++....+
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l----------~i~~~~~~~~~ll~~~~~- 320 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL----------MAYAIIGMALCLGSIFAG- 320 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcC-
Confidence 899999987632 33434445556666688899999999999999988753 344444445555544544
Q ss_pred chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhccccccc-ChhhHHHHHHHHH
Q psy14136 386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDET-SLESWRQVFLIAG 464 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~-~~~~~~~~f~~~~ 464 (534)
+.. ....+.+.+++.+..+|..++...+..+++..++.+...+. .+|+.+.|.+.|.+.|..+. ..++++..|++-.
T Consensus 321 ~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 321 GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 322 34555555667777778888888888887754434433333 39999999999999995100 0014677777654
Q ss_pred HHHH
Q psy14136 465 AVGS 468 (534)
Q Consensus 465 ~~~~ 468 (534)
.+.+
T Consensus 399 ~~~~ 402 (410)
T TIGR00885 399 LCFA 402 (410)
T ss_pred HHHH
Confidence 4443
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=6.8e-30 Score=258.66 Aligned_cols=336 Identities=18% Similarity=0.170 Sum_probs=239.8
Q ss_pred CChhhHHHHHHH-----HHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
Q psy14136 100 WDTTTQGAILSS-----FYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------ALIALRS 166 (534)
Q Consensus 100 ~s~~~~g~~~s~-----~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~l~~~r~ 166 (534)
.++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++.+++.++++++ +++. .+++.|+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~ 104 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--PSYATIGIWAPILLLLARL 104 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--CChhhhHHHHHHHHHHHHH
Confidence 455666655543 334445789999999999999999999999999999887665 4543 5889999
Q ss_pred HHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchhhHHHH
Q psy14136 167 IQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSLGAIWC 237 (534)
Q Consensus 167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~~li~~ 237 (534)
++|++.+...+...+++.|++|+++|++..++ ..+..+|.++++.++..+. +.++||+.|++.+++.++..
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 105 IQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999994 4678889999888776653 35789999988766655433
Q ss_pred HHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHH--HHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136 238 VAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPP--AWAIGITTFGRIWVHYIFIIPGPRYMK 315 (534)
Q Consensus 238 i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (534)
. .....||+++..+ +++ ++++.+.+.++.+++++ ++...+..++..........+.|.|++
T Consensus 185 ~-~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (394)
T TIGR00883 185 Y-LRRNLEETPVFEK---AQE-------------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLT 247 (394)
T ss_pred H-HHHhcCCChhHHH---HHh-------------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2233344332111 000 00112334566666655 777777777777777888889999998
Q ss_pred hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH-HHHhh-cCCchhHHHHH
Q psy14136 316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLV-MLIGY-LGCNVALVLIT 393 (534)
Q Consensus 316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 393 (534)
+.+|.+..+.+.......++.+++.++.|++.||++||+.+ ...+.+.....+ ..... ...+.+.....
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL---------IIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH---------HHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 87899999999999999999999999999999999998753 112221211111 11112 12244444455
Q ss_pred HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHH
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGS 468 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~ 468 (534)
.++.+++.+...+.......|..|++ |+++.++. +....+|..++|.+.|.+.+. .+ |...++....+.+
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM-----TGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH-----cCcchhHHHHHHHHHH
Confidence 55566666677777888889998876 99999985 445567888999999999998 44 6666666554443
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.2e-29 Score=256.11 Aligned_cols=356 Identities=14% Similarity=0.071 Sum_probs=237.7
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHHH-----HHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAVL-----HYGALIALRSIQ 168 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~~-----~~~~l~~~r~l~ 168 (534)
++++|+|+.++|++.+.+.++..+++++.|+++||+|||++++++..+.+++..... +..++ .+...++++++.
T Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
T PRK09528 38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL 117 (420)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 447999999999999999999999999999999999999999887766665443211 11111 111122334444
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
|.+.....+....+..+. ++++++.++ .....++|..+++++++.+.+ .+|+.+|++.+++.++..++.++..+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 118 GFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred hhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccc
Confidence 443333333333333222 345677778 557789999999999998876 4899999998888777666665554443
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT 324 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~ 324 (534)
+++.+. ++++.+ + +++......++.+|+|.++.+.+..++....+.....+.|.|+.+.+ +.+..+
T Consensus 195 ~~~~~~-~~~~~~--------~--~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
T PRK09528 195 PSTAKV-ANALGA--------N--ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV 263 (420)
T ss_pred cchhhh-ccchhc--------c--cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence 322110 000000 0 01111234556788888876666555555555555566777776643 455566
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
.+.+.+...+...++.++.|++.||+++|+.+ ..+.++.++...+..+.+ +.+..+....+.+...+..
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~ 332 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNAL----------LLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFL 332 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh----------HHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999998763 344455555555555554 5555554455555555444
Q ss_pred ccccchhhhccCCCc-hhHHHHH-HhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 405 YAGAMANVVDIGPNF-AGPILAF-AQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~-~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
.+....+..+..|++ +++..+. .++...+|..++|.+.|++.|. .||+..|.+.+++.++..++.++..++
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----IGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455556667767766 7777665 5777889999999999999998 789999999888877766665555443
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=5.3e-29 Score=248.79 Aligned_cols=325 Identities=16% Similarity=0.097 Sum_probs=245.5
Q ss_pred cCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 87 LEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR 165 (534)
Q Consensus 87 ~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r 165 (534)
...|.+|. ++++|+|+++.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++ . .++++.+++.|
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~~ 94 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S--APGTALLFAGT 94 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H--hccHHHHHHHH
Confidence 34577777 88999999999999999999999999999999999999999999999888887765 3 36888999999
Q ss_pred HHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhh
Q psy14136 166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWF 242 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~ 242 (534)
++.|++.+...+....++.|++| ++|++++++ ..+.++|..+++.+++.+.++. +||+.|.+.+++.++... .
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~ 170 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---A 170 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---H
Confidence 99999999888888899999996 689999994 4788899999999988887764 399998877655443322 2
Q ss_pred hccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136 243 LAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI 322 (534)
Q Consensus 243 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 322 (534)
.+|+.+++++. +. +..+...++++|+|.++...+..++....++....|+|.|+++ .|.+.
T Consensus 171 ~~~~~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~ 231 (355)
T TIGR00896 171 WIPQVRRRVAA----NQ--------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASA 231 (355)
T ss_pred HhhhhccccCC----CC--------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 23433221110 00 0011234567889998887777777777788888999999987 79999
Q ss_pred ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136 323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLIT 402 (534)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (534)
.+.+.+.+...++.++++++.|++.||+++|+.. ..++.++..++.+.+.+...+... ....+.+++.+
T Consensus 232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~g 300 (355)
T TIGR00896 232 ATAGSLLALMQLAQAASALLIPALARRVKDQRGI---------VAVLAVLQLVGLCGLLFAPMHGLW--AWALVLGLGQG 300 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH---------HHHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHhhh
Confidence 9999999999999999999999999999654321 234444444444444443322221 13345566666
Q ss_pred hcccccchhhhccC-CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 403 ASYAGAMANVVDIG-PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 403 ~~~~~~~~~~~~~~-p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
...+.......+.. +++ ++...++.+...+++..++|.+.|++.|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 301 GAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred hHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666555554433 333 78999999999999999999999999987
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=3.6e-28 Score=245.04 Aligned_cols=337 Identities=13% Similarity=0.100 Sum_probs=248.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCe----ehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTK----TVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI 170 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~ 170 (534)
.+|+|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+.. +.. ...+++++.+++.|++.|+
T Consensus 31 l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~l~i~~~l~g~ 106 (382)
T PRK11128 31 LKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA---VAF-WFGAHSFWLLFVAIGLFNL 106 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH---HHH-HHhcccHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999994 33322222221 111 2223679999999999999
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
+.+...|...+++.++ +++|+++.+ .....++|.++||++++++.+++|||..|++.++..++..+ ..+..||.++
T Consensus 107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~ 183 (382)
T PRK11128 107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIMP 183 (382)
T ss_pred HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCCC
Confidence 9999999988888887 456788888 55777899999999999999999999999887765444333 2333333211
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT 329 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 329 (534)
+. + +++ +.++...++++++|+|++|...+..++..........+.|.|+++ .|.+..+.+.+.
T Consensus 184 ~~---~-~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~ 246 (382)
T PRK11128 184 QG---E-SRQ------------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLW 246 (382)
T ss_pred cc---c-ccc------------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHH
Confidence 10 0 000 001123467899999999988888777777777777888999976 799998999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136 330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM 409 (534)
Q Consensus 330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
+...++.++..++.+++.||+++++.+ ..+.++.++..+.+...+ +.+..++..++.+++.+...+...
T Consensus 247 ~~~~~~~~~~~~~~g~l~~r~~~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 247 SLGVVAEVLIFAFSNRLFRRWSARDLL----------LLSAICGVVRWGLMGSTT-ALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHH----------HHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988899999999999999999988753 445555555555555554 556666666666777777667777
Q ss_pred hhhhccCCCchhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHH
Q psy14136 410 ANVVDIGPNFAGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYF 472 (534)
Q Consensus 410 ~~~~~~~p~~~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~ 472 (534)
.+..+..++++++..++.+.. ..+|..+||.+.|.+.|. .++ ..++..+++.+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-----~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 316 RYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-----LGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHHH
Confidence 777776666688889988744 566779999999999999 565 456666655554433
No 72
>KOG0569|consensus
Probab=99.97 E-value=2.5e-28 Score=243.48 Aligned_cols=370 Identities=16% Similarity=0.138 Sum_probs=258.9
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136 104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIASGLTWPAMYAL 182 (534)
Q Consensus 104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 182 (534)
..+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.++..++ ..+++..++++|++.|+..|........+
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 46788899999999999999999999999999999999988888876555 33579999999999999999999999999
Q ss_pred HhcccCCCcchhhhhhh-hhhhhHHHhhhhHH--HHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc--cchh
Q psy14136 183 VGHWIPSNERSRFMSSF-QGFSFGIGLTYPLC--GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR--ITRK 257 (534)
Q Consensus 183 i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~--~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~--~~~~ 257 (534)
+.|..|++.||....+. .+..+|.+++..++ ..+.+...|++.+.+..+++++..+ .+.++||+|+..-. .+++
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~ 219 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEE 219 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHH
Confidence 99999999999988755 68888888886665 3333556799999988887777555 45567999974211 1111
Q ss_pred hhh-hhh-------------h--ccCccccCCCCCcccHHHhhcCHHHHH----H-HHHHHHHHHHHHHHHhchhhhhHh
Q psy14136 258 ELD-YIQ-------------E--NIEPTIVGSKGLKVPWVSILTSPPAWA----I-GITTFGRIWVHYIFIIPGPRYMKT 316 (534)
Q Consensus 258 ~~~-~~~-------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~l~~ 316 (534)
|.+ .++ + +..++++..++.+.++++++++|.... . .+....+..+......|...++++
T Consensus 220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~ 299 (485)
T KOG0569|consen 220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT 299 (485)
T ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence 110 000 0 000111112235667889998865432 2 222233333455556666666666
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---CCc--hh---
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---GCN--VA--- 388 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~--- 388 (534)
.|++..++.+.....++..++.++++.++.||+|||+++ +.+..+..+..+++... ... .|
T Consensus 300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl----------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y 368 (485)
T KOG0569|consen 300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL----------LISLSLMAVALLLMSIALFLSNSFGSWLSY 368 (485)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 799999999999999999999999999999999999875 23333333222222111 101 11
Q ss_pred HHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHH
Q psy14136 389 LVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAV 466 (534)
Q Consensus 389 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~ 466 (534)
..+...+......+ +..|..+-...|++|+. |..++++..++..+..++-...+..+.+. .|-...+.+.+.+
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-----~g~~~filF~i~~ 443 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-----IGPYVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHH
Confidence 12233333333333 44667788889999977 99999999999999999999999888888 4543334444444
Q ss_pred HHHHHHHHHhhcCCccccCCCCCC
Q psy14136 467 GSCTYFFYQVLGTSEVQPWNQLKP 490 (534)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~ 490 (534)
.+..+.++..+||++.|+..|..+
T Consensus 444 ~~~~i~~~~~lPETkgr~~~eI~~ 467 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETKGRTPYEIIE 467 (485)
T ss_pred HHHHHHHHHhCcccCCCCHHHHHH
Confidence 555556667779888877655443
No 73
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=5e-28 Score=248.66 Aligned_cols=351 Identities=20% Similarity=0.224 Sum_probs=277.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhc
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA---VLHYGALIALRSIQGIASG 173 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---~~~~~~l~~~r~l~G~g~g 173 (534)
++.-|+..++++..+..+...+.++++|.++||++|||+++.+.++.++..++.++.. ..+.+.+++.-++.|++.+
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a 118 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSA 118 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHH
Confidence 3445789999999999999999999999999999999999999988877665543321 2367889999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
...|+.++++.+..|+++...++++. ...++..++||.++|.+...+|-.+.|.+.++..++...+.... +..+++++
T Consensus 119 ~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~-~~~~~~~~ 197 (524)
T PF05977_consen 119 FFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW-KPPPPPSS 197 (524)
T ss_pred HHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccc
Confidence 99999999999999999999999966 67899999999999999999999999998877666654443333 32221111
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
. ++|. .. +..+..++.+.++|.+....+..++.++....+...+|.+.++.+|.++...|++.+..
T Consensus 198 ~--~~e~--~~----------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~ 263 (524)
T PF05977_consen 198 L--PRER--FF----------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAF 263 (524)
T ss_pred c--chhh--hh----------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHH
Confidence 1 1110 00 11223556677778777666666666666666677789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
+++.+++.++.+++.+|+++++.+ ..+.++.+++++.+.+.+ +.+...+.+++.+++.........+..
T Consensus 264 gvGai~Gal~~~~l~~~~~~~~lv----------~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~ 332 (524)
T PF05977_consen 264 GVGAILGALLLPRLRRRLSSRRLV----------LLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLV 332 (524)
T ss_pred HHHHHHHHHHHHHhhcccCcchhh----------HHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888876653 455566666677777766 666667777777777777777778888
Q ss_pred hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
++..|++ ||+++++++++...+..+|..+.|.+.+. .|.+..+.+.+++.+++.++....+
T Consensus 333 Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-----~g~~~al~~a~~~lll~~~~~~~~~ 394 (524)
T PF05977_consen 333 QLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-----FGVRTALLIAGAALLLSALIALRFP 394 (524)
T ss_pred HHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999988 99999999999999999999999999999 7888888888777766666655443
No 74
>KOG3764|consensus
Probab=99.96 E-value=2.8e-29 Score=235.93 Aligned_cols=349 Identities=18% Similarity=0.130 Sum_probs=278.2
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
+.+.+-+.+++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+.++...+++. ++..+++.+++.|.+||+|.++
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF--afg~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF--AFGNSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH--HHcchhHHHHHHHHHhhhhHHH
Confidence 56777888999999999999999999999999999999999999999999999995 4447999999999999999999
Q ss_pred hhhhHHHHHhcccCCCc-chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 175 TWPAMYALVGHWIPSNE-RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~-r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
...+..++++|.+|+++ |++++| +..+.++|..+||++||.+.+..|.+.+|++.++++++-..+.++.++++..+.+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 99999999999998764 799999 6689999999999999999999999999999999999988888777655433221
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
...+..++++++++|.++.........+......-..++.++.+....+..+.|+.+...
T Consensus 256 --------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~ 315 (464)
T KOG3764|consen 256 --------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA 315 (464)
T ss_pred --------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence 012234678899999999988888888888888888889988888886666899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc---
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM--- 409 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 409 (534)
.+...++..+.|.+.||+++.+.+ ....+.++.++......+.+ ++..+++-.+..+++.+..-....
T Consensus 316 ~~~y~ig~~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 316 SLSYAIGTNLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred ccchhccCchHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999965432 24555555555555555554 444444433434444443333322
Q ss_pred hhhhccCC-C---chhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 410 ANVVDIGP-N---FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 410 ~~~~~~~p-~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+..|... + -.|...++......+|.++||.++|.+.+. .|+++...+.++..++-.-+...++.
T Consensus 387 ~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-----iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 387 GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-----IGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211 1 268999999999999999999999999999 89999888888877766655555443
No 75
>KOG2504|consensus
Probab=99.96 E-value=9.2e-29 Score=252.85 Aligned_cols=397 Identities=18% Similarity=0.233 Sum_probs=319.7
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
.|.|.+.+..+++.+..+-....+++..+.+
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~------------------------------------------------- 72 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEEL------------------------------------------------- 72 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHH-------------------------------------------------
Confidence 5788888888888888888888888666666
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGAL-IALRSIQGIA 171 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l-~~~r~l~G~g 171 (534)
+++++.+.++++|+.++......+.+|+.+.+.||+|.|.+.+.|.++.++|.++.+++. +++.+ +..-++.|+|
T Consensus 73 --~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~--~i~~l~lt~gvi~G~G 148 (509)
T KOG2504|consen 73 --MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT--SLWQLYLTFGVIGGLG 148 (509)
T ss_pred --HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhcc
Confidence 668999999999999999999999999999999999999999999999999999987774 66554 5578999999
Q ss_pred hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
.|+.+.....++..|| +|+|+.+.| ..++.++|.++-|++..++.+.+|||+.+++.+.+.+-..+......|..++.
T Consensus 149 ~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~ 227 (509)
T KOG2504|consen 149 LGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPK 227 (509)
T ss_pred chhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 9999999999999988 789999999 55899999999999999999999999999999988877777766666644332
Q ss_pred Ccccchhhhh-----------------------hhh------hccCccccCCC--CCccc----HHHhhcCHHHHHHHHH
Q psy14136 251 HPRITRKELD-----------------------YIQ------ENIEPTIVGSK--GLKVP----WVSILTSPPAWAIGIT 295 (534)
Q Consensus 251 ~~~~~~~~~~-----------------------~~~------~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 295 (534)
.+. ..++.+ ..+ ....+...+.+ ..+.. ..+++++|.++.+.+.
T Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~ 306 (509)
T KOG2504|consen 228 KPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALS 306 (509)
T ss_pred Cch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHH
Confidence 211 000000 000 00000000000 11111 2578999999999999
Q ss_pred HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136 296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL 375 (534)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~ 375 (534)
..+...++.....++|.|..+ .|++..+++.+.++.++..++++++.|++.|+...++. +...++.++.++
T Consensus 307 ~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~--------~~~~~~ll~~gl 377 (509)
T KOG2504|consen 307 NLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL--------VLFLLTLLIAGL 377 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH--------HHHHHHHHHHHH
Confidence 999999999999999999996 89999999999999999999999999999999874432 335566666666
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChh
Q psy14136 376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLE 454 (534)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 454 (534)
..+...+.. +.+.++...++.++..+.........+.++.+ ++-..+.|+...+..++..+||.+.|++.|. + .
T Consensus 378 ~~~~~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~--t--g 452 (509)
T KOG2504|consen 378 ARLFLPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDI--T--G 452 (509)
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeec--c--C
Confidence 666666665 66777777777788888777777677777776 5599999999999999999999999999998 2 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 455 SWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 455 ~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
+|...|++.+++.+++..++++.+
T Consensus 453 ~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CeeeehhhcChHHHHHHHHHHHhH
Confidence 599999999999999998887776
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=6.4e-28 Score=276.18 Aligned_cols=339 Identities=11% Similarity=0.037 Sum_probs=248.7
Q ss_pred hhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhh
Q psy14136 102 TTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQL---VTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPA 178 (534)
Q Consensus 102 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~---~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~ 178 (534)
....++..+++.++++++++++|+++||+|||+++..... +..+..++ ++ ..++++.++++|+++|++.++..|+
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~-~~-~~~s~~~l~~~~~l~gi~~a~~~p~ 128 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIY-GF-HLNSVPLLFAALFLMGIHSALFGPI 128 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHH-HH-HHhhHHHHHHHHHHHHHHHHhhchH
Confidence 3567889999999999999999999999999998643222 22222222 12 2268999999999999999999999
Q ss_pred HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchh
Q psy14136 179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRK 257 (534)
Q Consensus 179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~ 257 (534)
..+++.+++|+++|+++++ ..++.++|.++||++++++....+|++.|+..++..++. +++.+.+|+.+...+..+.+
T Consensus 129 ~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 207 (1140)
T PRK06814 129 KYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAPDLKID 207 (1140)
T ss_pred HHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCCeec
Confidence 9999999999999999999 557899999999999999999999999995544444443 33444455543322111100
Q ss_pred hhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHH
Q psy14136 258 ELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSY 337 (534)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~ 337 (534)
. ... +.....++.+.++|.++...+..++.++....+..++|.|+++.+|.++...+++.+...++.+
T Consensus 208 ~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 208 R-NII-----------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVA 275 (1140)
T ss_pred c-chH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 0 000 0011246778889999999888888888888888999999999899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-------------------CCchhHHHHHHHHHH
Q psy14136 338 LSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-------------------GCNVALVLITWFVAV 398 (534)
Q Consensus 338 ~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 398 (534)
++.++.|++.+|..+++.+ ..+.++.+++.+.+.+. ..+.+..++..++.+
T Consensus 276 ig~~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (1140)
T PRK06814 276 VGSFLASKLSEGRITLLYV----------PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA 345 (1140)
T ss_pred HHHHHHHHHhCCceeeeee----------hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence 9999999999887766543 11222222222111111 124455556666667
Q ss_pred HHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHH
Q psy14136 399 TLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSC 469 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~ 469 (534)
++.+...+...+.+++..|++ +|+++|+.+++..++..+++.+.|.+.+. . .++...+++.+++.++
T Consensus 346 ~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~--~--~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 346 AAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL--G--FSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh--c--cCHHHHHHHHHHHHHH
Confidence 777777777888888888876 99999999999999999999999998754 1 4566666555544333
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=2.1e-27 Score=241.18 Aligned_cols=348 Identities=13% Similarity=0.059 Sum_probs=241.8
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCee-hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKT-VFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQG 169 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G 169 (534)
+.|+|.+++|++..+... .+.++++|+++||+ |||| .+.++.++.+++..++.+.. ..+++.+++..++.+
T Consensus 28 ~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~ 105 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVA 105 (402)
T ss_pred HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 569999999999777765 58999999999999 8876 78888888887777755542 135777888888889
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
+..+...++..+++.|++|+++|+++.++. .+.++|.++++.+++.+.+. +|||..|++.+++.++..+. .+..||+
T Consensus 106 ~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~ 184 (402)
T PRK11902 106 FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence 999999999999999999999999999954 78899999999999998885 59999999988877665443 3455654
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL 327 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 327 (534)
++.+++. ++.. ++.+..+++++|+|.++...+..++..........+.+.++.+.+|+++.+.++
T Consensus 185 ~~~~~~~-~~~~--------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~ 249 (402)
T PRK11902 185 EVPARPP-RSLG--------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGI 249 (402)
T ss_pred ccccccc-chhH--------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 3321110 0000 011235678899998887777666665544433344555666668999999998
Q ss_pred HhhhHH-HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH---HHHHHHhhcCCchhHHHHHHHH----HHH
Q psy14136 328 LTGAPF-LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA---LLVMLIGYLGCNVALVLITWFV----AVT 399 (534)
Q Consensus 328 ~~~~~~-~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~ 399 (534)
+....+ ++.+++.++.+++.||+++|+.+ .++..+.. +.+......+.+.+.......+ .+.
T Consensus 250 ~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 250 VNKTLGLAATIVGALAGGTLMVRLGLYRSL----------MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGM 319 (402)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 876554 46889999999999999987653 22222222 2222223333233433333332 223
Q ss_pred HhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 400 LITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
..+........++.+..| ++..++.+....++..+++.+.|.+.|. .||+..|.+.+++.++++++....++
T Consensus 320 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 320 GTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEA-----YGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333334444445554444 4445666666677777677789999999 89999999988888777666554444
Q ss_pred C
Q psy14136 480 S 480 (534)
Q Consensus 480 ~ 480 (534)
+
T Consensus 392 ~ 392 (402)
T PRK11902 392 T 392 (402)
T ss_pred h
Confidence 3
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=2.8e-27 Score=239.89 Aligned_cols=351 Identities=13% Similarity=0.066 Sum_probs=246.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AA-----VLHYGALIALRSIQ 168 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~-----~~~~~~l~~~r~l~ 168 (534)
++++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+++..+++...... .. ...+..+++.|++.
T Consensus 30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (396)
T TIGR00882 30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL 109 (396)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999999999887776654433211 11 11234456778999
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
|++.+...+....++.+.. +++++..+ .....++|.++++++++.+.+ .+||.+|++.+++.++..++.+...|++
T Consensus 110 g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 110 GFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9998888888888877754 33455667 446778999999999988765 5999999999888887766655544443
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT 324 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~ 324 (534)
|+++. .+...+ .+ ++++...+.++++|+|.++...+..++....+.....+.+.|+++.+ +.+...
T Consensus 187 ~~~~~------~~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 255 (396)
T TIGR00882 187 PSSAT------VANALG---AN--ASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRV 255 (396)
T ss_pred chhhh------hhcccc---cc--cCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH
Confidence 32111 000000 00 11122335788899999887777766666666666667888887754 445556
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
.+.+.+...+...++.+..+++.||+++|+.+ .++.++.++........+ +.+......++.+.+....
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l----------~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~~~ 324 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNAL----------LIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVPFL 324 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----------HHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999998763 444445555444444444 4554444444444444333
Q ss_pred ccccchhhhccCCCc-hhHHHHH-HhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 405 YAGAMANVVDIGPNF-AGPILAF-AQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~-~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
......+..+..|++ ++++.+. .+....+|+.+++.+.|++.|. .||+.+|++.+++.++..+...
T Consensus 325 ~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 325 LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----IGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----cccHHHHHHHHHHHHHHHHHHH
Confidence 333334455555555 7776665 5778899999999999999998 7899999998888777665543
No 79
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.6e-27 Score=220.20 Aligned_cols=342 Identities=15% Similarity=0.153 Sum_probs=277.7
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|+|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++.++|.++-... +...++.+-.+.|.|.+.
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav 115 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAV 115 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHH
Confidence 78999999999999999999999999999999999999999999999999999996544 678899999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
.....++++.+.+| |+-+..+++| ...++|..+++.+...+.++. |||....+.+.++++.++.++ |...+.+
T Consensus 116 ~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~~- 190 (395)
T COG2807 116 INVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALREQ- 190 (395)
T ss_pred HHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhccccc-
Confidence 99999999999995 5678889988 578899999999988888886 799999999988888766554 3321110
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
.. . .+.+..+-..++|+|..|.+.+...++++.+|....|+|.++.| .|+|..++|.+.+..
T Consensus 191 ~~--~---------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~ 252 (395)
T COG2807 191 AA--S---------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLM 252 (395)
T ss_pred cc--c---------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHH
Confidence 00 0 01112233458999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
.+..++.++....+.+|.+.++.+ ......+..++++.+.+.+.+..+.. .++.+++.+..++.....+
T Consensus 253 ~l~~~~~~ll~P~la~R~~n~r~~---------~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~laL~li 321 (395)
T COG2807 253 QLAQLPTALLIPLLARRSKNQRPL---------VVLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLALTLI 321 (395)
T ss_pred HHHHHHHHHHHHHHHHHhcccchH---------HHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHHHHHH
Confidence 999999999999999996665543 33444444455554445543333333 4667777888888888887
Q ss_pred hccCC--CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 413 VDIGP--NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 413 ~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+..+ +..+.-+|+.+.++++-+.+||.+.|++.|. + ++|...++..+.+.+...+.-+..
T Consensus 322 ~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa--~--gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 322 LLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA--T--GSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh--c--CChHHHHHHHHHHHHHHHHHHhhc
Confidence 76554 4489999999999999999999999999998 3 689888888877766666555444
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=2.8e-27 Score=240.61 Aligned_cols=351 Identities=12% Similarity=0.087 Sum_probs=245.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCC-eehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT-KTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++++|++.+++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+. ++++.+++.|++.|++.+
T Consensus 30 ~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~ 107 (418)
T TIGR00889 30 SKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV--TTPAGMFPVLLANSLAYM 107 (418)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999965 778888888888877775544 578999999999999988
Q ss_pred chhhhHHHHHhccc--------CCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136 174 LTWPAMYALVGHWI--------PSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF 245 (534)
Q Consensus 174 ~~~~~~~~~i~~~~--------~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~ 245 (534)
...+...++..++. ....|.+..| .+|.++++.+++.+.....|+ +|++.+++.++..++ .+.+|
T Consensus 108 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G-----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~ 180 (418)
T TIGR00889 108 PTIALTNSISYANLPQAGLDVVTDFPPIRVMG-----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLP 180 (418)
T ss_pred cHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh-----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCC
Confidence 88887776654332 2223333333 478888888888774333354 465666666665544 44567
Q ss_pred CCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc---
Q psy14136 246 DAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI--- 322 (534)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~--- 322 (534)
|+|+.+++.+.+. + +....+.++++|+|+++.+.+..++..........+.+.|+++ .|.++
T Consensus 181 e~~~~~~~~~~~~-~-------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 245 (418)
T TIGR00889 181 DIPVAKSTAKMSI-K-------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFA 245 (418)
T ss_pred CCCCCccccccCH-H-------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hccccccc
Confidence 6643221110000 0 0011234568888988887777777766666666778888876 56543
Q ss_pred -----ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc---hhHHHHHH
Q psy14136 323 -----QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN---VALVLITW 394 (534)
Q Consensus 323 -----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 394 (534)
...+...+...+..+++.+..|++.||+++|+.+ .++.++.++....+.....+ .+..++..
T Consensus 246 ~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~ 315 (418)
T TIGR00889 246 DSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSM 315 (418)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHH
Confidence 5568888888999999999999999999998763 45555555554444443212 22334445
Q ss_pred HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHh-HHHHhhhhHHhHhhhhccccccc-ChhhHHHHHHHHHHHHHHHH
Q psy14136 395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQ-TIHMTASFLSPMVAGYFLQDDET-SLESWRQVFLIAGAVGSCTY 471 (534)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~~~~-~~~~~~~~f~~~~~~~~~~~ 471 (534)
++.+.+.+...+....++.+..|++ |++++|+.+ ....+|..+||.+.|.+.|..+. +..+|+..|++.+++.+++.
T Consensus 316 ~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~ 395 (418)
T TIGR00889 316 IVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILA 395 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 5555666666666677888888866 999999997 56789999999999999987211 00369999998888777766
Q ss_pred HHHHhhcC
Q psy14136 472 FFYQVLGT 479 (534)
Q Consensus 472 ~~~~~~~~ 479 (534)
++..++.+
T Consensus 396 ~l~~~~~~ 403 (418)
T TIGR00889 396 VLFMIFFK 403 (418)
T ss_pred HHHHHHhC
Confidence 66655543
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=3.6e-27 Score=270.93 Aligned_cols=343 Identities=17% Similarity=0.117 Sum_probs=251.9
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhcchhhhH
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIASGLTWPAM 179 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~g~~~~~~ 179 (534)
+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.+++.++ ..++++.++++|+++|++.+...++.
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 34568999999999999999999999999999999999988777666654333 23579999999999999999999999
Q ss_pred HHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh--------c-CCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 180 YALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH--------Y-GWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 180 ~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~--------~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
.+++.|++|+++|++++++. .+.++|.++|+++++++.+. + +|++.+.+..+...+..++..+.+|+.|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999954 78899999999999999876 2 34444444443333333344445566554
Q ss_pred CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccc-cchhH
Q psy14136 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQ-TNGLL 328 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~-~~~~~ 328 (534)
......+++.. ...+.....++.++++|.++...+..++.......+..++|.|+++.+|++.. ..+++
T Consensus 205 ~~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~ 274 (1146)
T PRK08633 205 AAPEVFDKKKY----------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYL 274 (1146)
T ss_pred CCccccccccc----------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHH
Confidence 32211100000 00011123466788889888887777777777777888999999998999988 89999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccccc
Q psy14136 329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGA 408 (534)
Q Consensus 329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (534)
.+...++.+++.++.+++.||+++++.+ .++.++.+++++.+.+.. +.+..++..++.+++.+...+..
T Consensus 275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 343 (1146)
T PRK08633 275 LAASAIGIGIGSLLAGRLSGRHIELGLV----------PLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPL 343 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEccch----------hHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999887653 344444444455544444 55555566666667777777777
Q ss_pred chhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH
Q psy14136 409 MANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS 468 (534)
Q Consensus 409 ~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~ 468 (534)
.+++.+..|++ ||+++|+.+++..+|..+++.+.+.+... . .++...+++.+.+.+
T Consensus 344 ~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~--~--~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 344 NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL--G--LSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--c--cCHHHHHHHHHHHHH
Confidence 78888888766 99999999999999998888777655432 0 344455555544433
No 82
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=2.9e-26 Score=236.38 Aligned_cols=370 Identities=11% Similarity=0.048 Sum_probs=259.8
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
++|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++ ++++.++++|++.|+|.|..
T Consensus 42 ~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--~~~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 42 GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--IYPDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc--ccHhHHHHHHHHHHhccccc
Confidence 389999999999999999999999999999999 899999999999999999886554 57788889999999999999
Q ss_pred hhhHHHHHhcccCCCc---chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc---CCC
Q psy14136 176 WPAMYALVGHWIPSNE---RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF---DAP 248 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~---r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~---~~p 248 (534)
.+...++++|++|+++ |+++.+ .+.+.++|.++|+++++++.+++|||+.|++.++..++..+..++..+ +.|
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIG 199 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCC
Confidence 9999999999998764 888889 568999999999999999999999999999987655544333332221 222
Q ss_pred CCCcccchhhhhhhhhc----------------cCcccc------------------CCCCCcccHHHhhcCHHHHHHHH
Q psy14136 249 LKHPRITRKELDYIQEN----------------IEPTIV------------------GSKGLKVPWVSILTSPPAWAIGI 294 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~----------------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 294 (534)
++.+..++++.+..... ..+... ...++.....+..|...+..+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 279 (475)
T TIGR00924 200 SVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFL 279 (475)
T ss_pred CCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHH
Confidence 11111111111100000 000000 00000011111122233444555
Q ss_pred HHHHHHHHHHHHHhchhhhhHhhhCCcccc----chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHH
Q psy14136 295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQT----NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI-MSLTNIRKVFTAIS 369 (534)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l~~~~~~~~~~~~~ 369 (534)
...+....+....+.++.+.++..+.+... .+++.+...+..++..++..++..|++||.. .... .+ ..++
T Consensus 280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~--~k--~~~G 355 (475)
T TIGR00924 280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTP--LK--FTLG 355 (475)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcH--HH--HHHH
Confidence 555566666666677787777654443222 6678888888888888777776667766421 1100 11 2566
Q ss_pred HHHHHHHHHHHhh--------cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136 370 QVIPALLVMLIGY--------LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 370 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~ 440 (534)
+++.++++..+.. ...+.++.+...++.+.+.....|.......+..|++ ||+.+|+......+|..+++.
T Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~ 435 (475)
T TIGR00924 356 MLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGY 435 (475)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666555543 1337788888888899999999999999999999987 999999999999999999999
Q ss_pred hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+.....+. .++...|...++++++..++.++.
T Consensus 436 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 436 LATFGAVP-----QGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHhcc-----cchhhHHHHHHHHHHHHHHHHHHH
Confidence 88877666 567777777776666655555444
No 83
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=1.1e-27 Score=253.70 Aligned_cols=282 Identities=15% Similarity=0.250 Sum_probs=222.7
Q ss_pred HHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCccccC
Q psy14136 21 MSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDW 100 (534)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 100 (534)
..++.++...+.+..++.+++.+ +++|++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~i---------------------------------------------------ek~F~l 65 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTI---------------------------------------------------ERRFKL 65 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhh---------------------------------------------------hhhhCC
Confidence 34557788888899999888888 669999
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--------------------------
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-------------------------- 154 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-------------------------- 154 (534)
+..+.|++.+.+.++++++.++.|+++||+|||+++.+++++++++++++++..
T Consensus 66 ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c 145 (633)
T TIGR00805 66 STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLC 145 (633)
T ss_pred CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999976542
Q ss_pred -----------------------HHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhh
Q psy14136 155 -----------------------VLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTY 210 (534)
Q Consensus 155 -----------------------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~ 210 (534)
...+..++++|+++|+|.+..++...+++.|++|+++|+++++ .+.+..+|.++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ 225 (633)
T TIGR00805 146 MENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGY 225 (633)
T ss_pred cCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHH
Confidence 0025678899999999999999999999999999999999999 5578899999999
Q ss_pred hHHHHhhhhc----------------------CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccch--hhhhhhhhcc
Q psy14136 211 PLCGFLIAHY----------------------GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITR--KELDYIQENI 266 (534)
Q Consensus 211 ~l~~~l~~~~----------------------gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~--~~~~~~~~~~ 266 (534)
++++++.+.+ +||..|++.+++.++..+..+++.++.|+...+.+. ++.+...+..
T Consensus 226 llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~ 305 (633)
T TIGR00805 226 LLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSE 305 (633)
T ss_pred HHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccc
Confidence 9999988643 277788888888887766555444444432211111 1100000000
Q ss_pred Ccccc----CCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHHHHHH
Q psy14136 267 EPTIV----GSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSYLSSV 341 (534)
Q Consensus 267 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~~~~ 341 (534)
.+... ..++....+++++++|.++...+..++.....+++.+|+|.|+++.+|+++.+++++..+..+ +.+++.+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~ 385 (633)
T TIGR00805 306 DKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYL 385 (633)
T ss_pred cccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHh
Confidence 00000 001112346789999999999999999999999999999999999999999999999887776 6689999
Q ss_pred HHHHHHHHHhhh
Q psy14136 342 LFCYLADQLFVR 353 (534)
Q Consensus 342 ~~g~l~dr~~~~ 353 (534)
++|+++||++.+
T Consensus 386 l~G~l~~r~~~~ 397 (633)
T TIGR00805 386 IGGFIMKKFKLN 397 (633)
T ss_pred hhhheeeeeccc
Confidence 999999999854
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.8e-26 Score=218.92 Aligned_cols=342 Identities=14% Similarity=0.094 Sum_probs=268.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++.|+++..|.+++..+++.++.+++++.|++.+|+|+|+.++.|+.++++++.+.. .+...+|..++++-|+.|.|.+
T Consensus 40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~ 119 (422)
T COG0738 40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG 119 (422)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence 669999999999999999999999999999999999999999999999999998842 2344589999999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-------------------cCCchhhhhhchhh
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-------------------YGWRSVFYTTGSLG 233 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-------------------~gwr~~f~i~~~~~ 233 (534)
...++...+++...++++..+.+. .....++|..++|++++.+..+ -.||++|...+...
T Consensus 120 ~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~l 199 (422)
T COG0738 120 LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLL 199 (422)
T ss_pred HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999988888888 5678999999999999988762 24888998887766
Q ss_pred HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136 234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY 313 (534)
Q Consensus 234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (534)
++..+...... .|+.++.. +++ .++......+++++|+++...+..+++-........|++.|
T Consensus 200 vll~v~~~~~k--~p~~~~~~-~~~--------------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y 262 (422)
T COG0738 200 VLLAVLILLSK--LPDLQVAA-PSL--------------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSY 262 (422)
T ss_pred HHHHHHHHhcc--CCcCCccc-ccc--------------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 66555443322 12111100 000 01111156789999999999999999999999999999999
Q ss_pred hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy14136 314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLIT 393 (534)
Q Consensus 314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (534)
+.+..|.+..+++...+...++.++|++++.++..|++..|.+ .+..++..+.++...+.+ + ...+..
T Consensus 263 ~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L----------af~a~~~ill~~~~~l~~-g-~v~~~~ 330 (422)
T COG0738 263 LEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL----------AFYALIAILLLLAVALIG-G-VVALYA 330 (422)
T ss_pred HHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHhc-C-hHHHHH
Confidence 9998899999999999999999999999999999999888764 343434444444444554 3 445556
Q ss_pred HHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY 471 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~ 471 (534)
....+++.+..+|...+...+..|++...+.++ ..+.-+|+++-|.+.|++.|. .+....+.....++.+-.
T Consensus 331 l~~ig~F~simfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~-----~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 331 LFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADM-----FGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHH
Confidence 666778888999999999998888665554444 344568999999999999999 666666554444443333
No 85
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=2.2e-26 Score=226.01 Aligned_cols=364 Identities=12% Similarity=0.049 Sum_probs=244.9
Q ss_pred CccccCChhh-HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTT-QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
.+|+|+|++| .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.+++ +++..+.+.|++.|++.|
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L~i~R~llGvaEA 130 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWHMQLMEVFYSVTMA 130 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 4599999999 9999999999999999999999999999999999999999999998776 589999999999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhh--chhhHHHHHHhhhhccCCCCC
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTT--GSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~--~~~~li~~i~~~~~~~~~p~~ 250 (534)
... +...++..|+|+++|+++.+ ..++..+|.+++++++++ ...+|||+.+.+. ...+.+..+++-+++|..++.
T Consensus 131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence 999 99999999999999999999 558999999999999999 5568999865443 222333344445566643331
Q ss_pred Ccccchh--h---hhhhhhccCccc--cC--CC-C-------CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136 251 HPRITRK--E---LDYIQENIEPTI--VG--SK-G-------LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY 313 (534)
Q Consensus 251 ~~~~~~~--~---~~~~~~~~~~~~--~~--~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (534)
.-..+++ + ..+.+.....+. .. .+ . -...++...++|.+....+=+.+...+++.+.+|.-..
T Consensus 209 l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~L 288 (511)
T TIGR00806 209 LFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTL 288 (511)
T ss_pred hhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHH
Confidence 1000000 0 000000000000 00 00 0 01122344567776666666666666677776666655
Q ss_pred hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy14136 314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLIT 393 (534)
Q Consensus 314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (534)
-.+..+-.....|..-++..+.+.+..+..|++-.++.+. -...+.+..++.+..++++...+ +.+..++.
T Consensus 289 W~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~--------~~l~l~v~s~~~~gll~~m~~t~-~Iw~~Y~~ 359 (511)
T TIGR00806 289 WGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW--------SKLLIAVVSAIQAGLVFWMSQSH-DIWVLYVT 359 (511)
T ss_pred HHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh--------HHHHHHHHHHHHHHHhhhhhccc-chHHHHHH
Confidence 5553332223567777777888888888888885544221 12234555556666677777766 88888888
Q ss_pred HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh----hhcccccccChhhHHHHHHHHHHHHH
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA----GYFLQDDETSLESWRQVFLIAGAVGS 468 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~----g~l~~~~~~~~~~~~~~f~~~~~~~~ 468 (534)
.++......+..+....-+.....++ -|..+|+.+++.-+-..+-..+. |.-.+. .+...-|...|.+.+++.+
T Consensus 360 yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i-~~Qf~vY~~yf~~~~~i~~ 438 (511)
T TIGR00806 360 YVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQV-RKQFRIYSVYFLVLSIICF 438 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCc-eeEEEehhhHHHHHHHHHH
Confidence 88888888777777666666555544 79999998888776666655443 221111 0111234445666665555
Q ss_pred HHHH
Q psy14136 469 CTYF 472 (534)
Q Consensus 469 ~~~~ 472 (534)
+..+
T Consensus 439 ~~~~ 442 (511)
T TIGR00806 439 FGAG 442 (511)
T ss_pred HHHH
Confidence 5444
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=1e-25 Score=232.29 Aligned_cols=379 Identities=11% Similarity=0.068 Sum_probs=246.8
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLH-YGALIALRSIQGIAS 172 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~-~~~l~~~r~l~G~g~ 172 (534)
++++|++.++.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++++. + ...++++|+++|+|.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~--~~~~ll~~~~~l~~ig~ 119 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL--LKPDLIFIALGTIAVGN 119 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHhcc
Confidence 44789999999999999998999999999999999 9999999999999999999987653 3 334558999999999
Q ss_pred cchhhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 173 GLTWPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
|...|...+++.|++|+++ |.++++ .+.+.++|..+||.+++++.+++|||+.|++.++ +++..++.+...++..+
T Consensus 120 g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 120 GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVK 198 (489)
T ss_pred ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhc
Confidence 9999999999999998874 577788 5689999999999999999999999999998654 34434444433332221
Q ss_pred CC---cccchhh-hhhhh------------hccCccccCCC---------------CCcccHHHhhcCHHHHHHHHH--H
Q psy14136 250 KH---PRITRKE-LDYIQ------------ENIEPTIVGSK---------------GLKVPWVSILTSPPAWAIGIT--T 296 (534)
Q Consensus 250 ~~---~~~~~~~-~~~~~------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~--~ 296 (534)
+. ++.++.+ ..... ........... .......+.+|+|.+....+. .
T Consensus 199 ~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~ 278 (489)
T PRK10207 199 DIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEA 278 (489)
T ss_pred ccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 11 0000000 00000 00000000000 000000145566655443322 3
Q ss_pred HHHHHHHHHHHhchhhhhHhhhCCcc----ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136 297 FGRIWVHYIFIIPGPRYMKTILGFSI----QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI 372 (534)
Q Consensus 297 ~~~~~~~~~~~~~~~~~l~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 372 (534)
......+....+.++.+.++..+.+. .....+.+...+..++..++.+++.||+++|+.-.... .+ ..+++++
T Consensus 279 ~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~-~k--~~~G~~l 355 (489)
T PRK10207 279 VVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMP-MK--FTLGMFL 355 (489)
T ss_pred HHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcH-HH--HHHHHHH
Confidence 33444455555677777775333221 12234445556677788888899999999886311000 11 2344444
Q ss_pred HHHHHHHH-----hhc----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 373 PALLVMLI-----GYL----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 373 ~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
.+++++.+ ... ..+.++.+...++.+.+.++..+.....+.+..|++ +|.++|+.+....+|+.++..+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 356 CSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333221 111 124566777778888888899998899888888877 99999999999999999998887
Q ss_pred hhcccccc--c---ChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 443 GYFLQDDE--T---SLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 443 g~l~~~~~--~---~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
........ + ....+...|...++..++..++.+...+
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 436 TFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65532100 0 0123667777777776666666555443
No 87
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=1.5e-25 Score=229.20 Aligned_cols=373 Identities=15% Similarity=0.149 Sum_probs=260.5
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
|+|- .....|+.+.+.++.+++.++.|+++|.||||++++.+.++..+|+++++-+ +|...++++..+.|+|.|...
T Consensus 73 diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA--~~~~~~iag~~l~GvgaG~~~ 149 (599)
T PF06609_consen 73 DIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA--QNMNTFIAGMVLYGVGAGVQE 149 (599)
T ss_pred hcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC--CcHHHHHHHHHHHHHhhHHHH
Confidence 6664 3678899999999999999999999999999999999999999999997544 799999999999999977554
Q ss_pred hhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC--cc
Q psy14136 177 PAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH--PR 253 (534)
Q Consensus 177 ~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~--~~ 253 (534)
.....++|..|.|.|+...++. ...-+....++.++..+..+.+|||.|++.++...+.+++.+++..++++.. .+
T Consensus 150 -~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~ 228 (599)
T PF06609_consen 150 -LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR 228 (599)
T ss_pred -HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc
Confidence 5666799999999998777643 3333444567777777776779999999999887777666555544333211 11
Q ss_pred -cc-hhhhhhhhh---------------------ccC-c-----------------------cccCCCCCcccHHHhhcC
Q psy14136 254 -IT-RKELDYIQE---------------------NIE-P-----------------------TIVGSKGLKVPWVSILTS 286 (534)
Q Consensus 254 -~~-~~~~~~~~~---------------------~~~-~-----------------------~~~~~~~~~~~~~~~~~~ 286 (534)
.. .++.+++.- ... + +.....+++.-..+++|+
T Consensus 229 ~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~ 308 (599)
T PF06609_consen 229 KLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKD 308 (599)
T ss_pred cCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhcc
Confidence 11 111111100 000 0 000111233345678887
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccc---cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q psy14136 287 -PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQ---TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIR 362 (534)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~ 362 (534)
|.+...++..++....++....+.|+.....++-++. ..++......++..++.++.|.+..+++|-|.
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw------- 381 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW------- 381 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH-------
Confidence 5566666677777777888888888888877777653 56788888889999999999999988876543
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136 363 KVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~ 440 (534)
.++++.++..+++..+... +.+....+...++.+++.+..........+-..|++ -|++.|+...++.+|+.+|..
T Consensus 382 --~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 382 --QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYA 459 (599)
T ss_pred --HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHH
Confidence 3444544444433333322 224444455666667777766666666666666655 999999999999999999998
Q ss_pred hhhhccccc--------------------------------c--------c-----------------ChhhHHHHHHHH
Q psy14136 441 VAGYFLQDD--------------------------------E--------T-----------------SLESWRQVFLIA 463 (534)
Q Consensus 441 ~~g~l~~~~--------------------------------~--------~-----------------~~~~~~~~f~~~ 463 (534)
+...++..- + + -..+|+.+|+..
T Consensus 460 Iy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~s 539 (599)
T PF06609_consen 460 IYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSS 539 (599)
T ss_pred HHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 886665320 0 0 013578888888
Q ss_pred HHHHHHHHHHHHhhcCCcc
Q psy14136 464 GAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~ 482 (534)
..+.++++++.++++..++
T Consensus 540 iaFG~vaiiaa~fl~d~~~ 558 (599)
T PF06609_consen 540 IAFGVVAIIAALFLGDIDK 558 (599)
T ss_pred HHHHHHHHHHHHHcCChHH
Confidence 8888888888888766543
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=1.7e-26 Score=230.73 Aligned_cols=310 Identities=13% Similarity=0.068 Sum_probs=229.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCeeh-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKTV-FGFSQLVTAICSLLIPQAA-VLHYGALIALRSI 167 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l 167 (534)
.+|+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.++..+.+++.. ..+++.+....++
T Consensus 15 ~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~ 92 (356)
T TIGR00901 15 LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFL 92 (356)
T ss_pred HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHH
Confidence 67899999999999766 555555 89999999998 89997 4667777777665654431 1356677788888
Q ss_pred HhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC--------CchhhhhhchhhHHHHH
Q psy14136 168 QGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG--------WRSVFYTTGSLGAIWCV 238 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~i~~~~~li~~i 238 (534)
.+++.+...++..+++.|++|+|+|+++.++. .+..+|.++++.+++.+.+..| ||.+|++.+++.++..+
T Consensus 93 ~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~ 172 (356)
T TIGR00901 93 IAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLL 172 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999954 7889999999999999988888 99999999887777655
Q ss_pred HhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHH---HHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136 239 AWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPP---AWAIGITTFGRIWVHYIFIIPGPRYMK 315 (534)
Q Consensus 239 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (534)
..++..||+++..+. ++++.+ +.+..+++++++|. ++...+..++.....+....+.|.|++
T Consensus 173 ~~~~~~~e~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (356)
T TIGR00901 173 VTLFLAKEPQEDASV-PKPLTQ--------------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLL 237 (356)
T ss_pred HHHHhccCCCccccc-chhHHH--------------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555455663322111 111100 01124566666664 777777777777888888899999999
Q ss_pred hhhCCccccchhHhhhHH-HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc--C--------
Q psy14136 316 TILGFSIQTNGLLTGAPF-LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL--G-------- 384 (534)
Q Consensus 316 ~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------- 384 (534)
+ +|++..+.+.+....+ +..+++.+++|++.||+++|+.+ ..+.++.++....+.+. .
T Consensus 238 ~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 238 D-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred H-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 8 8999999888877665 57889999999999999988753 23333333333322221 1
Q ss_pred CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHH
Q psy14136 385 CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHM 432 (534)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~ 432 (534)
.+.+......++.+++.+...+...++..+..|++ ||+.+|+.+...+
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 13344555555667777888888899999998876 9999999887764
No 89
>KOG0252|consensus
Probab=99.95 E-value=1.3e-27 Score=228.65 Aligned_cols=421 Identities=13% Similarity=0.087 Sum_probs=288.0
Q ss_pred chHH-HHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136 13 PARV-VLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN 91 (534)
Q Consensus 13 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 91 (534)
+|+. ....+.-.+++.+.+|...++.+.|-+.. =|-...
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~----------------lY~~~~------------------------ 75 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGY----------------LYYHGD------------------------ 75 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHH----------------HhcCCC------------------------
Confidence 4444 44444788999999999999987766522 111000
Q ss_pred CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Q psy14136 92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-----HYGALIALRS 166 (534)
Q Consensus 92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-----~~~~l~~~r~ 166 (534)
.+.=+.++...+.+..+..+|.++||++.|+++||+|||+++...++++.++++++++.... -+.++.+.|+
T Consensus 76 ---~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~ 152 (538)
T KOG0252|consen 76 ---ESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRF 152 (538)
T ss_pred ---CCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHH
Confidence 11123556678899999999999999999999999999999999999999999987665322 2678999999
Q ss_pred HHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh---------------cCCchhhhhhc
Q psy14136 167 IQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH---------------YGWRSVFYTTG 230 (534)
Q Consensus 167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~---------------~gwr~~f~i~~ 230 (534)
+.|+|.|+-+|...++.+|...+++||...+ +++..++|.+.|.+++-.+..- .=||..|.+.+
T Consensus 153 ~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~ 232 (538)
T KOG0252|consen 153 LLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGA 232 (538)
T ss_pred HhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 7777777777776665444321 12999998877
Q ss_pred hhhHHHHHHhhhhccCCCCCCcccc-------hhhhhhhhhccCcccc---CCCCCccc---HHHhhcC---HHHHHHHH
Q psy14136 231 SLGAIWCVAWWFLAFDAPLKHPRIT-------RKELDYIQENIEPTIV---GSKGLKVP---WVSILTS---PPAWAIGI 294 (534)
Q Consensus 231 ~~~li~~i~~~~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~---~~~~~~~~ 294 (534)
+++++.. ...+.+||+++.....+ ++.++.+...+.++.. ..+.++.. +.+.+.. +++...+.
T Consensus 233 vpa~~~l-y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~ 311 (538)
T KOG0252|consen 233 VPALLVL-YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG 311 (538)
T ss_pred HHHHHHH-HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 6666543 34455677654331100 0000111111111000 00111111 2222222 45667778
Q ss_pred HHHHHHHHHHHHHhchhhhhHhhhCCccccchh--------HhhhH-HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136 295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL--------LTGAP-FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF 365 (534)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~--------~~~~~-~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 365 (534)
.+++.-.+++....+...+++. .|+.+.+... ...+. ....+++-.+...++|++||++.
T Consensus 312 ~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i---------- 380 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI---------- 380 (538)
T ss_pred HHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH----------
Confidence 8888888899988888888886 5776655444 11111 12233355566678999999876
Q ss_pred HHHHHHHHHHHHHHHhhcCC---chhHH-HHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136 366 TAISQVIPALLVMLIGYLGC---NVALV-LITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~ 440 (534)
.+.++.+..+..+.+..... +.... +...+...++..........+..|.+|.. |+++.|+..+.+..|++++..
T Consensus 381 q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 381 QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 36677777776666655432 11122 22223333444455556677888999987 999999999999999999999
Q ss_pred hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCC
Q psy14136 441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQL 488 (534)
Q Consensus 441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (534)
...++.++......+.+.+|++.+.+++++.+..++++++++++.++.
T Consensus 461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei 508 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEI 508 (538)
T ss_pred HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHh
Confidence 999998832222278899999999999999999999998887776655
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=1e-26 Score=239.07 Aligned_cols=328 Identities=13% Similarity=0.106 Sum_probs=239.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCee-hhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKT-VFGFSQLVTAICSLLIPQAAV----LHYGALIALR 165 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r 165 (534)
.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+... ..+..+++.+
T Consensus 27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 106 (437)
T TIGR00792 27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITY 106 (437)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 66899999999999999999999999999999998 67754 677788888887777533210 1256677788
Q ss_pred HHHhhhhcchhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136 166 SIQGIASGLTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW 236 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~ 236 (534)
++.+++.+...+...++..|.. ++++|++..++. .+..+|..+++.+.+.+.. ..+||+.+.+.++++++.
T Consensus 107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~ 186 (437)
T TIGR00792 107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVS 186 (437)
T ss_pred HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHH
Confidence 9999998888888889999987 468899998854 5677777766665544442 458999999999888887
Q ss_pred HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136 237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT 316 (534)
Q Consensus 237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (534)
.+..++..||++++.+.. ++ ++.+....+++++++|.++...+..++..........+.+.|.+.
T Consensus 187 ~~~~~~~~~e~~~~~~~~---~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (437)
T TIGR00792 187 LIICFFGTKERYSEIPKN---IE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTY 251 (437)
T ss_pred HHHHHcCCEecCCCCCcc---cc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEee
Confidence 777766777654221100 00 001122356778899999988888888777777766666777766
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFV 396 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (534)
.++ +....+.+.....++.+++.++.+++.||+++|+.+ .++.++..+....+.+.+.+.+...+..++
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF----------AGGILLMVLGYLIFFFAGSNLPLILVLIIL 320 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 555 455666777777899999999999999999988653 344444444444443333244444555566
Q ss_pred HHHHhhhcccccchhhhccCC--------CchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 397 AVTLITASYAGAMANVVDIGP--------NFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.+++.+...+...+...|..+ +.+|.++|+.+....+|..+++.+.|.+.+.
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 321 AGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677667777777766532 3389999999999999999999999998875
No 91
>KOG0254|consensus
Probab=99.94 E-value=5.2e-26 Score=237.54 Aligned_cols=368 Identities=14% Similarity=0.138 Sum_probs=248.7
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136 103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL 182 (534)
Q Consensus 103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 182 (534)
++.+|+.+.+.++.++++++.|+++|++|||+.++++.+++.+|.++++++ +|++.++++|+++|+|.|......+.+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhh
Confidence 577999999999999999999999999999999999999999999997666 699999999999999999999999999
Q ss_pred HhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccc-hhhh
Q psy14136 183 VGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT-RKEL 259 (534)
Q Consensus 183 i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~-~~~~ 259 (534)
++|..|++.||...+.. ....+|..++..++....+. ++||..+.+..+.+++..+. .+++||+|+..-+.. .++.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 99999999999999944 67778888885554444332 48999999998888887777 778899987432211 1111
Q ss_pred hhhhhccCc------------------cccCCCCCcccHHHhhc----CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh
Q psy14136 260 DYIQENIEP------------------TIVGSKGLKVPWVSILT----SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI 317 (534)
Q Consensus 260 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 317 (534)
+.....+.. .+......+..++++++ ++.++...+..+.+..+......|.+.+++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 111000000 00000111112334333 2334455556666666667778888888776
Q ss_pred hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc----C-------Cc
Q psy14136 318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL----G-------CN 386 (534)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~ 386 (534)
.|.+... .......++..+++.+++.++.||+|||+.+ +.+.....++.++++.. . ..
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~ 393 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGA 393 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence 5665433 5556677888889999999999999999875 33333333333322211 1 01
Q ss_pred hhHHHHH-HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136 387 VALVLIT-WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG 464 (534)
Q Consensus 387 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~ 464 (534)
.+..+.. ++....+.....+..+....|.+|.+ |+.+.++......+...+-......+.+. .+....|...+
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~-----~~~~~~f~~f~ 468 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA-----LGIGGTFGYFG 468 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchHHHHH
Confidence 1222222 23333333455556677889999977 99999999999988887766665555554 22223333333
Q ss_pred HHHHHHH--HHHHhhcCCccccCCCCCC
Q psy14136 465 AVGSCTY--FFYQVLGTSEVQPWNQLKP 490 (534)
Q Consensus 465 ~~~~~~~--~~~~~~~~~~~~~~~~~~~ 490 (534)
.++.+.. .++++++|++.+..++.++
T Consensus 469 ~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 469 GICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred HHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 3333333 3556668887776665443
No 92
>KOG0253|consensus
Probab=99.94 E-value=1.7e-25 Score=207.59 Aligned_cols=394 Identities=13% Similarity=0.182 Sum_probs=281.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136 13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV 92 (534)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 92 (534)
+.+|.+......+.+-..+.....+.+.|..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l------------------------------------------------- 104 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPAL------------------------------------------------- 104 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 4566677766777777777766666666666
Q ss_pred CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136 93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~ 172 (534)
+..++.+..|..++......|..+++..+|.++|++|||+.+.+..+...+...+.+.. +|+..+++.|.+.|+|.
T Consensus 105 --~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~s--pnf~~L~~f~~l~~~g~ 180 (528)
T KOG0253|consen 105 --DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGAS--PNFASLCVFRALWGFGV 180 (528)
T ss_pred --HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCC--CCeehhhHHHHHHhccC
Confidence 55778899999999999999999999999999999999999999999999988886544 79999999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
|. .|...++-.|..|..+|...+-....+.+|.++...+.-.+..++||||.....+.+..+. ....+++||+|+..-
T Consensus 181 gg-~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~-a~f~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFA-ARFLVWVYESPRFYL 258 (528)
T ss_pred CC-ccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH-HHHHhhcccCcchhh
Confidence 98 8999999999999999998888558899999999999988889999999888887555444 445567799987421
Q ss_pred ccchhh-----hhhh------------------------hhccCccccC-CCCCcccHHHhhc---CHHHHHHHHHHHHH
Q psy14136 253 RITRKE-----LDYI------------------------QENIEPTIVG-SKGLKVPWVSILT---SPPAWAIGITTFGR 299 (534)
Q Consensus 253 ~~~~~~-----~~~~------------------------~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 299 (534)
...+++ .+++ +..+++.+.+ .+....+..+++. ++..+.++..++..
T Consensus 259 ~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgn 338 (528)
T KOG0253|consen 259 AKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGN 338 (528)
T ss_pred hcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhh
Confidence 111110 0000 0001111100 1112223344443 23455666666666
Q ss_pred HHHHHHHHhchhhhhHhhh--C-----------------CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q psy14136 300 IWVHYIFIIPGPRYMKTIL--G-----------------FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTN 360 (534)
Q Consensus 300 ~~~~~~~~~~~~~~l~~~~--g-----------------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~ 360 (534)
.+.+++.........+... + .+...--.=..+..+..+.|.++.+++.||+|||+.+
T Consensus 339 afsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM---- 414 (528)
T KOG0253|consen 339 AFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM---- 414 (528)
T ss_pred HHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----
Confidence 6777766554444443211 0 0111111123456788999999999999999999974
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHh
Q psy14136 361 IRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSP 439 (534)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~ 439 (534)
+.++++.+++.+++.... ......+..+.+-++....+...+.+..|++|.. |+++.|....+..+|+++.|
T Consensus 415 ------al~l~~f~iflfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p 487 (528)
T KOG0253|consen 415 ------ALSLILFGIFLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSP 487 (528)
T ss_pred ------HHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhh
Confidence 677777777776665554 4444555566667777888889999999999988 99999999999999999999
Q ss_pred HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+. ...+. .-..+..+.+.+++++.++..+++-
T Consensus 488 ~iA-~~~e~------s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 488 VIA-MRAEL------STSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred HHH-HHhcc------ceeehHHHHHHHHHHHHHHheeeee
Confidence 998 33333 2334455556666666666666654
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=3.1e-24 Score=217.20 Aligned_cols=343 Identities=11% Similarity=0.058 Sum_probs=238.6
Q ss_pred ccccCChhhHHHH--HHHHHHHHHHhhccc-chhhcccCCeehhHHHHHHH-HHHHHHHH-HHHH-HHHHHHHHHHHHHh
Q psy14136 96 GEFDWDTTTQGAI--LSSFYWCYILSQVVG-GVLTQRFGTKTVFGFSQLVT-AICSLLIP-QAAV-LHYGALIALRSIQG 169 (534)
Q Consensus 96 ~~~~~s~~~~g~~--~s~~~l~~~~~~~~~-G~l~Dr~Grr~~l~~~~~~~-~i~~~l~~-~a~~-~~~~~l~~~r~l~G 169 (534)
+|.|.|.+++|++ .+++.+...+.+|+. ++..||+||||..++.+.+. ++.....+ +... ....+++..-++.+
T Consensus 29 ~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (390)
T TIGR02718 29 REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACAS 108 (390)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHH
Confidence 3679999999997 467788888888888 55799999999875555332 21122211 1111 12334455556666
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
+..+...+...++..|..++++++...+.. .+..+|.++|+.+.+++.+++|||.+|++.+++.++..+..++..|+++
T Consensus 109 ~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~ 188 (390)
T TIGR02718 109 LASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV 188 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 777778888888999999888888887755 5678999999999999999999999999999888776666555444332
Q ss_pred CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136 249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLL 328 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 328 (534)
++++. + ++...++++++|+|.++...+..++..........+.+.|++| .|+++++.+.+
T Consensus 189 ~~~~~----~---------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~ 248 (390)
T TIGR02718 189 ASPEA----P---------------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRL 248 (390)
T ss_pred Ccccc----c---------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHH
Confidence 11100 0 0011246778899988888877788877777888889999988 79999999998
Q ss_pred hhhHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHHHhhc----CCchhHHHHHHHHHHHHhh
Q psy14136 329 TGAPFL-CSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVMLIGYL----GCNVALVLITWFVAVTLIT 402 (534)
Q Consensus 329 ~~~~~~-~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 402 (534)
.....+ ..+++.++.|++.||+++|+.+ ..+..+.+. .+...... ............+..+..+
T Consensus 249 ~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 249 GMAGGAVTVLLGCGGGAWLVRRAGLWRTF----------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhHHHHH----------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 887764 6677889999999999998764 222222211 11111111 1122222333333344455
Q ss_pred hcccccchhhhccC-C-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 403 ASYAGAMANVVDIG-P-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 403 ~~~~~~~~~~~~~~-p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
...+.......+.. | +++++.+++.+...++|..++|.+.|.+.|. .||+..|++.+++.+++.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-----~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-----FGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHH
Confidence 55555555555544 4 4599999999999999999999999999998 78989998887776665543
No 94
>KOG2615|consensus
Probab=99.94 E-value=2.5e-25 Score=208.22 Aligned_cols=337 Identities=17% Similarity=0.138 Sum_probs=228.4
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
+.+.+..-.|.+.+.|++++.+.++.+|.++||+|||+++++|++..++..++ ++.+.||..+++.|++.|+..| ..
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll--~~~S~~F~afv~aR~l~Gi~kg-nl 138 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLL--WALSRNFAAFVLARFLGGIFKG-NL 138 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhccC-ch
Confidence 33456678899999999999999999999999999999999999999998888 5666799788888999999987 67
Q ss_pred hhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh---hcCCchhhhhh----chhhHHHHHHhhhhccCCC
Q psy14136 177 PAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA---HYGWRSVFYTT----GSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 177 ~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f~i~----~~~~li~~i~~~~~~~~~p 248 (534)
.+..++++|.+++|+|+++++ +....++|.++||.+|+++.+ ..| +.+|... .++...-.....+++||+-
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 899999999999999999999 668999999999999999988 222 2222221 1222221223344567764
Q ss_pred CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHH-------HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc
Q psy14136 249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPA-------WAIGITTFGRIWVHYIFIIPGPRYMKTILGFS 321 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 321 (534)
+.+++. ++.....+..+..+...+.....-...+|++.. -.+.+..+.+...+..+..+.+.+..+.+|++
T Consensus 218 ~~rk~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~s 295 (451)
T KOG2615|consen 218 PLRKRN--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYS 295 (451)
T ss_pred cchhhc--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCC
Confidence 443332 111111111111100000000001112333221 23334445555555555555565656779999
Q ss_pred cccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136 322 IQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLI 401 (534)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (534)
+.+.|.+.+..++.+.+......+..+|.+.... ......+.+..-.++++.... ....+.....+..+..
T Consensus 296 s~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~--------a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 296 SMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIK--------AVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFST 366 (451)
T ss_pred hhhheeeeehhhHHHHHHHHhccccccccccchh--------hHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHH
Confidence 9999999998888888888777777777652210 112233333333334444444 4455556666666666
Q ss_pred hhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
....+....++....|++ ||+++|+....+.++-++||.+.|.+...
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 666677777788888866 99999999999999999999999998876
No 95
>KOG0255|consensus
Probab=99.94 E-value=1.9e-24 Score=226.92 Aligned_cols=368 Identities=16% Similarity=0.149 Sum_probs=255.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+.++.+.....+..+++++|.++|++++|+++||+|||++++.++++..++.++++++ +|++.+++.|+++|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence 35777888999999999999999999999999999999999999999999999886665 7999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCccc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRI 254 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~ 254 (534)
.......++.|++++++|+.+..+......++.+++++++++.. +||+.+++..+++++..+. +++.||+|+.....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999855667788888888888887 6999999999888886665 55666888643211
Q ss_pred ch-hhhhhhhhc--------cCc------------cccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136 255 TR-KELDYIQEN--------IEP------------TIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY 313 (534)
Q Consensus 255 ~~-~~~~~~~~~--------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (534)
.+ ++..+..+. ... .+....+++..+.++++.|++....+......+.......-++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 11 111111000 000 000011123457778888754444333333332222222222222
Q ss_pred hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchh--HHH
Q psy14136 314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVA--LVL 391 (534)
Q Consensus 314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 391 (534)
... +|.+. .......+.....+....+...|+.|||.. ...+..+..++++...+...... ...
T Consensus 345 ~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
T KOG0255|consen 345 VSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLAGIGLLLFGWLPDDLGGWLHW 410 (521)
T ss_pred hhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 222 34333 333444455777788888899999988765 45666677777777666653333 456
Q ss_pred HHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH-H
Q psy14136 392 ITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS-C 469 (534)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~-~ 469 (534)
+...+..++.+..+...+.+..|+.|+. |+.+.+.......++++++|.+.-..... . .... +...+.+.. .
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~-~---~~~~--~~~~~~~~~l~ 484 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM-F---PLLG--LILFGWLALLL 484 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c---ccch--HHHHHHHHHHH
Confidence 6666667777777777789999999988 99999999999999999999887433322 0 1221 122333333 3
Q ss_pred HHHHHHhhcCCccccCCC
Q psy14136 470 TYFFYQVLGTSEVQPWNQ 487 (534)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ 487 (534)
+.+..+++++++.+...+
T Consensus 485 ~~~~~~~lpet~~~~l~~ 502 (521)
T KOG0255|consen 485 GLLSLLLLPETKGKPLPG 502 (521)
T ss_pred HHHHHhcCcccCCCCCch
Confidence 334447778877766543
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=5.6e-25 Score=226.68 Aligned_cols=378 Identities=11% Similarity=0.033 Sum_probs=271.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV----LHYGALIALRSIQGI 170 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r~l~G~ 170 (534)
++++|+|..+++++.++. ....+++++.|++.||+|||++++++.+++++++++++++.. .+++.+++.|++.|+
T Consensus 54 ~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 569999999999999874 445677888999999999999999999999999999877632 479999999999999
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~ 249 (534)
|.+...+.....+.+|+| ++||++.|+ ..+.++|.++.+.+...+.. .+|+..|++.++++++..++.+.++++.|.
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~ 210 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPF 210 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcc
Confidence 999999999999999996 789999995 47889998764444444333 368999999999999888888877776653
Q ss_pred CCc-----ccchhhhhhhh--------h--------------------------------------------cc------
Q psy14136 250 KHP-----RITRKELDYIQ--------E--------------------------------------------NI------ 266 (534)
Q Consensus 250 ~~~-----~~~~~~~~~~~--------~--------------------------------------------~~------ 266 (534)
... +.+++|+...+ + .+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~ 290 (591)
T PTZ00207 211 HLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIF 290 (591)
T ss_pred hhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 221 11122211000 0 00
Q ss_pred ---------------C-c-----------------ccc-------C-C-CCCcccHHHhhcCHHHHHHHHHHHHHHHHHH
Q psy14136 267 ---------------E-P-----------------TIV-------G-S-KGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304 (534)
Q Consensus 267 ---------------~-~-----------------~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (534)
. + .+. + . ++...++++.+++..+|++++..++......
T Consensus 291 p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl 370 (591)
T PTZ00207 291 PFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHF 370 (591)
T ss_pred HHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchh
Confidence 0 0 000 0 0 0111266778888999999999999999888
Q ss_pred HHHhchhhhhHhhhCCcccc--chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 305 IFIIPGPRYMKTILGFSIQT--NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY 382 (534)
Q Consensus 305 ~~~~~~~~~l~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (534)
.+...+.++.+..-|.+... ...+.++.++++.+|++..|.+.....+|+..+ ..-|...+.+..+ ..+..+++..
T Consensus 371 ~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~-r~prt~~l~~~~~-~~~~~lll~~ 448 (591)
T PTZ00207 371 VIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAED-RVPITIALFIPSV-CIITMLTLFL 448 (591)
T ss_pred eeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcccc-ccchhHHHHHHHH-HHHHHHHHHH
Confidence 88888888888743763333 333788999999999999999884444443110 0113333444444 3333333333
Q ss_pred cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHH-hHhhhhccccccc--------Ch
Q psy14136 383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLS-PMVAGYFLQDDET--------SL 453 (534)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~-~~~~g~l~~~~~~--------~~ 453 (534)
.- ....+.+..++.+++.|..++.....+.|++.++-|+-.-+.....-+|..+- -.+.|.++|.... +.
T Consensus 449 ~~-p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~ 527 (591)
T PTZ00207 449 TL-PKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTER 527 (591)
T ss_pred HC-CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCc
Confidence 32 22567788888899999999999999999999779998888888888887765 6688999987221 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 454 ESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 454 ~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
.=++..|++++++++++.++...+.
T Consensus 528 ~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 528 VCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred eeeHhHHHHHHHHHHHHHHHHhhee
Confidence 2368889999999988888766653
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=1.9e-23 Score=216.72 Aligned_cols=374 Identities=14% Similarity=0.086 Sum_probs=235.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++++++. ++.+.++++|+++|++.|
T Consensus 49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~-~~~~~l~~~~~l~gig~g 127 (500)
T PRK09584 49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG-HDAGIVYMGMATIAVGNG 127 (500)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHhhh
Confidence 44899999999999988887777777899999999 5999999999999999988876542 346677789999999999
Q ss_pred chhhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHH---hhhhccCC
Q psy14136 174 LTWPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVA---WWFLAFDA 247 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~---~~~~~~~~ 247 (534)
...+...+++.|++|+++ |..+++ .+.+.++|..+||.+++++.+++|||+.|++.++..++..+. ....+++.
T Consensus 128 ~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~ 207 (500)
T PRK09584 128 LFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQY 207 (500)
T ss_pred cccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccC
Confidence 999999999999998654 445677 568899999999999999999999999999887544443322 22233332
Q ss_pred CCCCcccchhhhhhhh------------hc-cCccccCC--------------CCCcccHHHhhcCHHHHHHHHHHHHHH
Q psy14136 248 PLKHPRITRKELDYIQ------------EN-IEPTIVGS--------------KGLKVPWVSILTSPPAWAIGITTFGRI 300 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~------------~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (534)
+++.+..+.+...... .. ....+... ........+.-+ ++.+.. +..+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 285 (500)
T PRK09584 208 GSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEA 285 (500)
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHH
Confidence 1111100000000000 00 00000000 000000011111 222222 2222333
Q ss_pred HHHHHHHhchhhhhHh--hhCCcc------ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136 301 WVHYIFIIPGPRYMKT--ILGFSI------QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI 372 (534)
Q Consensus 301 ~~~~~~~~~~~~~l~~--~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 372 (534)
..++......|.++.. ....+. ...+++.+...+..++..++.+++-+|.++|... .....+++++
T Consensus 286 i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~------~~~~~~G~~l 359 (500)
T PRK09584 286 IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM------PHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc------HHHHHHHHHH
Confidence 4444555555555442 111221 2256667777777778878877777777766321 1124566667
Q ss_pred HHHHHHHHhhcCC--------chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 373 PALLVMLIGYLGC--------NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 373 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
.+++++.+..... +.++.+...++.+.+.....|....++.+..|++ ||+++|+......+|..++..+.+
T Consensus 360 ~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 360 CSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665544321 2456777788888888899999999999999987 999999887777777766666654
Q ss_pred hcccc----c-ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 444 YFLQD----D-ETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 444 ~l~~~----~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
..... + .....++...|...+++.++..++.+.+
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 440 LMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22210 0 0001247788888887766555544444
No 98
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=1.5e-29 Score=261.25 Aligned_cols=368 Identities=18% Similarity=0.234 Sum_probs=246.2
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcchhh
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL---HYGALIALRSIQGIASGLTWP 177 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~---~~~~l~~~r~l~G~g~g~~~~ 177 (534)
+..+.+++.+...+|..+|++++|.++||+|||+.++++.++..+++++.+++ + +++.+.++|+++|++.|...+
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred hHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc
Confidence 56789999999999999999999999999999999999999999999997665 6 899999999999999999999
Q ss_pred hHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh---cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136 178 AMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH---YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR 253 (534)
Q Consensus 178 ~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~---~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~ 253 (534)
....++.|..|+++|++..++. .+..+|.+++..++..+... .+||..+++.++++++..+ ..+++||+|+..-.
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~ 200 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLS 200 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceecc
Confidence 9999999999999999999944 67788888888776555333 3599999999888877555 44678999875322
Q ss_pred cchhh-hhh-hhh---------ccCcc---ccCCCCCcccHHHhhcCHH----HHHHHHHHHHHH-HHHHHHHhchhhhh
Q psy14136 254 ITRKE-LDY-IQE---------NIEPT---IVGSKGLKVPWVSILTSPP----AWAIGITTFGRI-WVHYIFIIPGPRYM 314 (534)
Q Consensus 254 ~~~~~-~~~-~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~l 314 (534)
+.+.+ .++ .++ +.++. .++.++.+..++++++++. +...+....... .+......+.+.++
T Consensus 201 ~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~ 280 (451)
T PF00083_consen 201 KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF 280 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence 21111 100 000 00000 0011111234666777643 222222233332 23334445556665
Q ss_pred HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh----hcCCc----
Q psy14136 315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG----YLGCN---- 386 (534)
Q Consensus 315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---- 386 (534)
++ .+.+.. -.......+..+++.+++.++.||+|||+.+ ..+..+.+++...+. .....
T Consensus 281 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 281 EN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred cc-cccccc--ccccccccccccccccccccccccccccccc----------cccccccccccccccccccccccccccc
Confidence 54 566655 2333445567777888888999999999775 344444443333332 11111
Q ss_pred hhHHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136 387 VALVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG 464 (534)
Q Consensus 387 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~ 464 (534)
....+....+.....+ ...+..+.+..|.+|.+ |+++.|+....+.+++++++.+...+.+. .+....+.+.+
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-----~~~~~~~~i~~ 422 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-----LGGWGVFLIFA 422 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccchhhH
Confidence 1122222222222222 44456668889999977 99999999999999999999999888877 44233444444
Q ss_pred HH-HHHHHHHHHhhcCCccccCCCCC
Q psy14136 465 AV-GSCTYFFYQVLGTSEVQPWNQLK 489 (534)
Q Consensus 465 ~~-~~~~~~~~~~~~~~~~~~~~~~~ 489 (534)
++ .+...+.+++++|++.++.+|.+
T Consensus 423 ~~~~i~~i~~~~~lpET~g~~l~ei~ 448 (451)
T PF00083_consen 423 GVCLIAIIFVYFFLPETKGKTLEEIQ 448 (451)
T ss_pred HHHHHHHhheeEEEeeCCCCCHHHHH
Confidence 44 44444555667888887766543
No 99
>KOG4686|consensus
Probab=99.92 E-value=8e-25 Score=196.08 Aligned_cols=366 Identities=16% Similarity=0.133 Sum_probs=248.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~ 172 (534)
+.|.+++.++..++.+.|++..++..+++|++.|| +|.|+.-++-+....+|.++.+.. .++.+|.++++||+.|+|.
T Consensus 71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGg 150 (459)
T KOG4686|consen 71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGG 150 (459)
T ss_pred hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCc
Confidence 66888899999999999999999999999999997 688887777777777887774321 3468999999999999998
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCch---------hhhhhchhhHHHHHHhhh
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRS---------VFYTTGSLGAIWCVAWWF 242 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~---------~f~i~~~~~li~~i~~~~ 242 (534)
-....+-.+++.-|+..||.+.++|++ +...+|..+--.+.+++.+..+=-. ..+..+.......+.+..
T Consensus 151 ESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical 230 (459)
T KOG4686|consen 151 ESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL 230 (459)
T ss_pred hhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999966 6777888776666666665532100 001111111111111111
Q ss_pred hccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhh-cCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc
Q psy14136 243 LAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSIL-TSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS 321 (534)
Q Consensus 243 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 321 (534)
.+-- ..+..|+...+++-...+ . + ...+.. -.|.+|.+.+..+++..+...+....|.++++.+|+|
T Consensus 231 ~lg~------~D~rAerilh~e~g~~Ge---~-p--kLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS 298 (459)
T KOG4686|consen 231 SLGL------SDDRAERILHLEEGFLGE---E-P--KLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLS 298 (459)
T ss_pred Hhhh------hhhHHHHHHhhhcCcccC---C-c--ccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCC
Confidence 1000 000111111111100000 0 0 111111 1378999999999999999999999999999999999
Q ss_pred cccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136 322 IQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLI 401 (534)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (534)
+..++.+.+.......+.+++.|.++||+|++... ..-+.+...+.-..+.++..++ +..+.+.+...
T Consensus 299 ~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsP---y~~m~~lGLsy 366 (459)
T KOG4686|consen 299 AVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSP---YTSMTFLGLSY 366 (459)
T ss_pred hhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccH---HHHHHHHhhhH
Confidence 99999999999999999999999999999997653 2222233333333333332233 33444444444
Q ss_pred hhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
.......+..+..+.|++ .|++.|..+.+.++|-++.|.+.|.+.|.++ +....+..|+..+.+.+.+..+.+.+.++
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-~y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-SYDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-chhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 444445666777778877 9999999999999999999999999999822 12233444555555555555555555555
Q ss_pred ccccC
Q psy14136 481 EVQPW 485 (534)
Q Consensus 481 ~~~~~ 485 (534)
++...
T Consensus 446 q~gnL 450 (459)
T KOG4686|consen 446 QSGNL 450 (459)
T ss_pred ccCCC
Confidence 54433
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=2.1e-22 Score=207.22 Aligned_cols=358 Identities=13% Similarity=0.017 Sum_probs=232.7
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----CeehhHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTVFGFSQLVTA-ICSLLIPQAAVLH-YGALIALRSI 167 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-i~~~l~~~a~~~~-~~~l~~~r~l 167 (534)
++++|+|+++++...++..+...+-.+ +|+++||++ ||+.++++.++.+ ++... ++..++ .....+..++
T Consensus 53 ~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~--l~~~~~~~~~~~~~~~l 129 (468)
T TIGR00788 53 TDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL--LPGKVSSAKVAAAFIFL 129 (468)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh--cccccchHHHHHHHHHH
Confidence 458999999999999999999999666 999999998 7777888877763 33222 332234 3444458999
Q ss_pred HhhhhcchhhhHHHHHhcccCCCcchhhhhhh----hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136 168 QGIASGLTWPAMYALVGHWIPSNERSRFMSSF----QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~----~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~ 243 (534)
.+++.+...++..+++.|..+ +++....+.. ...++|.++++.++|.+.+.++||..|++.+++.++.. +..++
T Consensus 130 ~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~-~~~~~ 207 (468)
T TIGR00788 130 AALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL-FVSNL 207 (468)
T ss_pred HHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHh
Confidence 999999999999999999998 5554433333 33458999999999999999999999999988877763 34455
Q ss_pred ccCCCC-CCcccchhhh---hhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH-HHHHHHHHHhchhhhhHhhh
Q psy14136 244 AFDAPL-KHPRITRKEL---DYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG-RIWVHYIFIIPGPRYMKTIL 318 (534)
Q Consensus 244 ~~~~p~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 318 (534)
.+|++. ..++..+++. ......... ..++.....++.+++|.++...+..++ .......... .-.+.++..
T Consensus 208 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~l 283 (468)
T TIGR00788 208 SKERRAFVRPRIGTYLEMNMALLTLGVLA---NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGS-VFCATTQCL 283 (468)
T ss_pred cccccccccccccccchhhhhhhhhhHHH---HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEcccC
Confidence 666531 1111100000 000000000 000111234556788888876655555 2221111111 111333458
Q ss_pred CCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---------CCchhH
Q psy14136 319 GFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---------GCNVAL 389 (534)
Q Consensus 319 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 389 (534)
|+++...|.+....+++.+++..+.+++.+|++.|+.+ .++.++.+++.+..... ..+.+.
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l----------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~ 353 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF----------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVF 353 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH----------HHHHHHHHHHHhCceeeeeccccccCCCCeee
Confidence 99999999999999999999999999988888877653 34444444333221100 012233
Q ss_pred HHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH
Q psy14136 390 VLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS 468 (534)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~ 468 (534)
.....++..++.+........++.+..|++ +|+..++.+.+.++|..+++.++|.+.+..+.....++..+....+..+
T Consensus 354 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~ 433 (468)
T TIGR00788 354 VLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSL 433 (468)
T ss_pred eeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 344445556666666777788888888876 9999999999999999999999998887722111235555555444444
Q ss_pred HHH
Q psy14136 469 CTY 471 (534)
Q Consensus 469 ~~~ 471 (534)
..+
T Consensus 434 ~~l 436 (468)
T TIGR00788 434 APL 436 (468)
T ss_pred HHH
Confidence 333
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=1.1e-20 Score=192.53 Aligned_cols=357 Identities=13% Similarity=0.051 Sum_probs=265.8
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHH
Q psy14136 103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGF-SQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYA 181 (534)
Q Consensus 103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 181 (534)
+..++..++..+..++..|+.|.++|+-|+||.++. ..++.++.+++..+....+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999997765554 4555555666654443345666666666666777888999999
Q ss_pred HHhcccCCCcc--------------------------hhhhh-hhhhhhhHHHhhhhHHHHhhhh--------cCCchhh
Q psy14136 182 LVGHWIPSNER--------------------------SRFMS-SFQGFSFGIGLTYPLCGFLIAH--------YGWRSVF 226 (534)
Q Consensus 182 ~i~~~~~~~~r--------------------------~~~~~-~~~~~~~G~~~g~~l~~~l~~~--------~gwr~~f 226 (534)
++.|..+++++ ++..+ -++...+|+++.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 88888 4566778877766655444322 2358888
Q ss_pred hhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q psy14136 227 YTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306 (534)
Q Consensus 227 ~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (534)
.+.++.-++..+..++++|+.|..++.....+. ..... ++....++++.|.|.+...++..++..-+...+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti 300 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LRFGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTI 300 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HHHHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888888888763221111110 00000 111234566778899999999999999999999
Q ss_pred HhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhh--cccchhHHHHHHHHHHHHHH-HHHHHHHh--
Q psy14136 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVR--NIMSLTNIRKVFTAISQVIP-ALLVMLIG-- 381 (534)
Q Consensus 307 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~~~-~~~~~~~~-- 381 (534)
......|.++.+|++..+...+.....+.+++|+++.|++.||+|.| +.+ .++.++. .+.+..+.
T Consensus 301 ~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l----------~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 301 ISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL----------LISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH----------HHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998 432 1111111 11111111
Q ss_pred ----hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136 382 ----YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW 456 (534)
Q Consensus 382 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 456 (534)
....+.+..++..++.+.+.|..++..-++..++.|+. .+..+|++...+...+++||.+.|.+.+. + ++.
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~--t--g~~ 446 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA--T--GSQ 446 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCc
Confidence 01225566777777888888998999999999998876 99999999999999999999999999998 2 457
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 457 RQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 457 ~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
+..+....++.++++++...+..++.
T Consensus 447 r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 447 RYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred hhHHHHHHHHHHHHHHHHhhccchhh
Confidence 88899888888888888766655443
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.89 E-value=1.1e-20 Score=188.98 Aligned_cols=353 Identities=15% Similarity=0.169 Sum_probs=250.4
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-CeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-TKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
+.|.|..|+|++.++..+...++++++|.++||++ +||++.+..++.++..... ...++++.+++.-++..+.....
T Consensus 31 ~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~--~~~~~f~~~~~~~~l~~~~~~p~ 108 (400)
T PF03825_consen 31 SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL--AFSSSFWWLFVIMLLFSFFFSPT 108 (400)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHHHccH
Confidence 56899999999999999999999999999999986 5777777777766655443 33468888888888889888889
Q ss_pred hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhH-HHHhhhhcCC---chhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136 176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPL-CGFLIAHYGW---RSVFYTTGSLGAIWCVAWWFLAFDAPLK 250 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l-~~~l~~~~gw---r~~f~i~~~~~li~~i~~~~~~~~~p~~ 250 (534)
.|...++..+... +++.-.| +-...++|.+++... ++.+....++ ...+++.+...++..... +.+|+.|.+
T Consensus 109 ~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~ 185 (400)
T PF03825_consen 109 MPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPK 185 (400)
T ss_pred HHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCccc
Confidence 9999999999885 3444555 556667777666543 2333333332 345566555544433333 345665522
Q ss_pred CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136 251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 330 (534)
++.. ++. ++....+..+++|+|+++...+..++..........+.+.|+++..|.+....+.+.+
T Consensus 186 ~~~~--~~~-------------~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~ 250 (400)
T PF03825_consen 186 RSAK--ESV-------------KKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWA 250 (400)
T ss_pred cccC--CCc-------------ccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence 1110 000 0111223457999999999999989888888899999999999854477778888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH----HHHHHHhhhccc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW----FVAVTLITASYA 406 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 406 (534)
+..+..++.-...+++..|+|.++. +.++.+..++=..++.....+.+...... .+-+...+....
T Consensus 251 l~~~aEi~~f~~~~~~~~r~g~~~l----------l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~ 320 (400)
T PF03825_consen 251 LGVVAEIPFFFFSGRFLKRFGIKWL----------LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHA 320 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHH
Confidence 8889999999999999999998876 36777777777777777632433333322 345666777778
Q ss_pred ccchhhhccCCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccC-hhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 407 GAMANVVDIGPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETS-LESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 407 ~~~~~~~~~~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
....++.+..|++ |+++.++++.. ..+|..+|..++|+++|..+.. ...|...+.+.+++.++..+++.++.|
T Consensus 321 a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 321 ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8888999999977 99999999886 4689999999999999982211 123445566666666555555555433
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.88 E-value=4.7e-21 Score=187.93 Aligned_cols=355 Identities=15% Similarity=0.126 Sum_probs=243.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHH--HHHHH-HHH--HHHHH-HHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAI--CSLLI-PQA--AVLHY-GALIALRSIQ 168 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i--~~~l~-~~a--~~~~~-~~l~~~r~l~ 168 (534)
++..|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..+.+..+ +.... .+. ...|+ ...+++-+..
T Consensus 35 ~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l 114 (412)
T PF01306_consen 35 TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL 114 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999977766554433222 22221 111 01122 2233334444
Q ss_pred hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
|+......|+.-+++.++. ++.+.-.| .-...++|.+++..++|.+.+. +-+..||+....+++..++.++..|+.
T Consensus 115 ~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 5555556677777666665 34455566 5578899999999999999874 456788877766666655555555544
Q ss_pred CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT 324 (534)
Q Consensus 248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~ 324 (534)
+++.+..+.++.+ +++.......+++|+|++|.+.+........+..+-...|.|....+ +.+...
T Consensus 192 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~ 260 (412)
T PF01306_consen 192 PPQAEVADALGAK-----------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQM 260 (412)
T ss_dssp SSSS-SSTTSSS-----------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHH
T ss_pred chhhhhhcccccC-----------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhH
Confidence 4332211111000 00111234568899999999998888877777777766777776532 344566
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
.|++.+...+..++...+..++.+|+|.|+.+ .++..+..+=....++.+ +.+.+...-.+-++-....
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L----------llag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~ 329 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLL----------LLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLL 329 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----------HHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH----------HHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999874 566666777777777777 7777777777777777777
Q ss_pred ccccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 405 YAGAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.....-++.+.+|++ .++...+. +....+|..+.+.+.|.++|. .|++..|++++.+.++..++..+.-+
T Consensus 330 lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-----~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 330 LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-----IGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-----cCcHHHHHHHHHHHHHHHHHheeeec
Confidence 778888899999887 78888885 677889999999999999999 89999999988887776666655543
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.88 E-value=2.2e-20 Score=189.10 Aligned_cols=362 Identities=15% Similarity=0.108 Sum_probs=247.4
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCCeehhHHH-HHHHHHHHHHHHHHHHHHH-------------
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGTKTVFGFS-QLVTAICSLLIPQAAVLHY------------- 158 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~~~-~~~~~i~~~l~~~a~~~~~------------- 158 (534)
++|.+..+.+++..+..+...+.+|+.|+++| |+||||.++++ .+..+++.++.+++ ++.
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~--~~~~~~~~~~~~~~~~ 110 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA--ADIGHLFGDNLDKKTK 110 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC--chhhhhccccccccch
Confidence 78999999999999999999999999999999 59999998875 55555555554443 232
Q ss_pred ----HHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcc--hhhhhhh-hhhhhHHHhhhhHHHHh--hhhc---------
Q psy14136 159 ----GALIALRSIQGIASGLTWPAMYALVGHWIPSNER--SRFMSSF-QGFSFGIGLTYPLCGFL--IAHY--------- 220 (534)
Q Consensus 159 ----~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r--~~~~~~~-~~~~~G~~~g~~l~~~l--~~~~--------- 220 (534)
..++++-.+..++.....+...++++|.+|+++| +.+.++. ...++|.++|+.++++. .+.+
T Consensus 111 ~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~ 190 (477)
T TIGR01301 111 PRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACG 190 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccc
Confidence 2233333345557788889999999999998865 4677744 67899999999998875 2221
Q ss_pred ----CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc-----CHHHHH
Q psy14136 221 ----GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT-----SPPAWA 291 (534)
Q Consensus 221 ----gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 291 (534)
+.|..|++.+++.++..++..+..+|.|...++..+++ +. ++. ++......++++++ .|.++.
T Consensus 191 ~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--~~----~~~--~~~~~~~~~~~i~~~~~~mP~~m~~ 262 (477)
T TIGR01301 191 VSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--EA----APP--SKHGEEAFFGELFGAFKYLPRPVWI 262 (477)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--hc----ccc--cccchhhhHHHHHHHHHHCCHHHHH
Confidence 56889999988888888888888888764322111100 00 000 00111122344443 267899
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhHh-hhCCcccc----------chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q psy14136 292 IGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQT----------NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTN 360 (534)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~----------~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~ 360 (534)
+++..++..++.+.+..|.+.|+.+ .++.++.. ..+......+...+.+++..++.+|+|+|+..
T Consensus 263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~---- 338 (477)
T TIGR01301 263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL---- 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----
Confidence 9999999999999999999998874 55544321 12233444555567777788888888754332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC---c-----------------hhHHHHHHHHHHHHhhhcccccchhhhccCCC--
Q psy14136 361 IRKVFTAISQVIPALLVMLIGYLGC---N-----------------VALVLITWFVAVTLITASYAGAMANVVDIGPN-- 418 (534)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-- 418 (534)
-.++.++.++++....+... + .+..++.+...++..+......++++.+..|+
T Consensus 339 -----~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 339 -----WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 13444444444444432210 0 25566667777888888888899998887773
Q ss_pred -chhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh-cCC
Q psy14136 419 -FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL-GTS 480 (534)
Q Consensus 419 -~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~ 480 (534)
+.|..+|+.|.+..+.+.+.....|.+.+..+ .+-..++.+.++.+++++++.++. ++.
T Consensus 414 ~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g---~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 414 AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG---GGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC---CCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 37999999999999999999988888555511 244567778888777777766554 443
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=8.1e-22 Score=204.13 Aligned_cols=329 Identities=12% Similarity=0.037 Sum_probs=221.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCC-eehhHHHHHHHHHHHHHHHHHH---HH--HHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGT-KTVFGFSQLVTAICSLLIPQAA---VL--HYGALIAL 164 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-r~~l~~~~~~~~i~~~l~~~a~---~~--~~~~l~~~ 164 (534)
.+.+|+++.++|.+..+..+.-++..|+.|+++| |+|| |+.++++.+..+++.+++ +.. .+ .+..+++.
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll-f~~p~~~~~~~~~~~~~~ 112 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL-FSAHLFEGTAQYVFVCVT 112 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH-HcCCCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 6698 556677877777776554 321 01 23455666
Q ss_pred HHHHhhhhcchhhhHHHHHhccc-CCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhh-------cCCchhhhhhchhhHH
Q psy14136 165 RSIQGIASGLTWPAMYALVGHWI-PSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAH-------YGWRSVFYTTGSLGAI 235 (534)
Q Consensus 165 r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~i~~~~~li 235 (534)
-++.+++.....+...+++.|.. ++++|.+..+. ..+.++|..+.+.+...+.+. .+|+....+.+++.++
T Consensus 113 ~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~ 192 (473)
T PRK10429 113 YILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIV 192 (473)
T ss_pred HHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 67778888888888999999998 58899998885 566667655555444333221 3567777777666666
Q ss_pred HHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136 236 WCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMK 315 (534)
Q Consensus 236 ~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (534)
..+..++..||.++......+ + +++.+.+..++.+++||.++.+++..++..........+.+.|.+
T Consensus 193 ~~~~~~~~~~e~~~~~~~~~~-~------------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~ 259 (473)
T PRK10429 193 STIITLRNVHEVYSSDNQVSA-E------------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFT 259 (473)
T ss_pred HHHHHHcCceecCCccccccc-c------------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEE
Confidence 665666556664322110000 0 001122334566778999988888888887777777666666666
Q ss_pred hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh---hc-CCchhHHH
Q psy14136 316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG---YL-GCNVALVL 391 (534)
Q Consensus 316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~ 391 (534)
...+ +....+.+.....++.+++.++.+++.||+|+|+.+ .++.++..++.+.+. +. +.+.+..+
T Consensus 260 y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (473)
T PRK10429 260 YVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW----------AGASIFPVLSCGVLLLMGLAAPHNALLIV 328 (473)
T ss_pred EECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence 5433 445556666667788999999999999999998764 222222222222111 11 22344444
Q ss_pred HHHHHHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 392 ITWFVAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+..++.+.+.+.......++..|..+ ++ .|..+|...++..++..+++.+.|.+.+.
T Consensus 329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666666666777777643 22 56699999999999999999999998765
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=1.3e-19 Score=184.25 Aligned_cols=368 Identities=13% Similarity=0.095 Sum_probs=225.9
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++... .+...+.++..+.++|.|.
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~-~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE-IHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHhccc
Confidence 36899999999999999999999999999999999 999999999999999987754321 1223344444455566677
Q ss_pred hhhhHHHHHhcccCCC--cchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC-
Q psy14136 175 TWPAMYALVGHWIPSN--ERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK- 250 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~--~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~- 250 (534)
..+...++++|.+|++ +|..+++ .+++.++|..++|.+.+++.+.+|||+.|.+.++..++..+..++..+..++.
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~ 196 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 7788889999999876 6888899 66888999999999999999999999999987654444333332222111110
Q ss_pred --Ccccchhhhhh----------------hh-hccCccccC----------------CCCCcccHHHhhcCHH--HHHHH
Q psy14136 251 --HPRITRKELDY----------------IQ-ENIEPTIVG----------------SKGLKVPWVSILTSPP--AWAIG 293 (534)
Q Consensus 251 --~~~~~~~~~~~----------------~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~~~ 293 (534)
+++..++++.. .. ....+.... ....+.+ +.-|+|- +..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~er~r~~~~~~l~ 274 (493)
T PRK15462 197 GVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAEN--QKQRKELGLIVTLT 274 (493)
T ss_pred CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHhhHHHHHHHH
Confidence 01110001000 00 000000000 0000000 0001111 22222
Q ss_pred HHHHHHHHHHHHHHhchhhhhHhh-----hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 294 ITTFGRIWVHYIFIIPGPRYMKTI-----LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
+...+....+....+-+..|.++. +|++ ...+++.++..+..++.+++.+++-.|..+|+. ..+...| ..+
T Consensus 275 ~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~-~~s~~~K--fa~ 350 (493)
T PRK15462 275 FFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR-TVRIWGK--FAL 350 (493)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC-CCCcHHH--HHH
Confidence 333333333333444455555442 2222 235677888888888888888888777744221 1111122 345
Q ss_pred HHHHHHHHHHHHhhc----C----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHH
Q psy14136 369 SQVIPALLVMLIGYL----G----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLS 438 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~ 438 (534)
++++.+++++.+... . .+.++++...++...+.-+..|...+.+.++.|++ +|+.+|+..... .+|..++
T Consensus 351 g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 351 GLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555655555444221 1 24566777777777888899999999999999988 999999996643 5666666
Q ss_pred hHhhhhccccccc-------ChhhHHHHHHHHHHHHHHH
Q psy14136 439 PMVAGYFLQDDET-------SLESWRQVFLIAGAVGSCT 470 (534)
Q Consensus 439 ~~~~g~l~~~~~~-------~~~~~~~~f~~~~~~~~~~ 470 (534)
..+.+.......+ ....|...|...+...++.
T Consensus 431 g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 431 GVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 6666554321000 1135777777777666554
No 107
>KOG2563|consensus
Probab=99.88 E-value=2.2e-21 Score=186.54 Aligned_cols=396 Identities=11% Similarity=0.061 Sum_probs=280.4
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136 9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE 88 (534)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (534)
.|.-++||++++...+-.+.+.+.+..++......
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~--------------------------------------------- 71 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYV--------------------------------------------- 71 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHH---------------------------------------------
Confidence 35668899999877776676666666665333222
Q ss_pred CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH----HHH--HHH
Q psy14136 89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL----HYG--ALI 162 (534)
Q Consensus 89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~----~~~--~l~ 162 (534)
++-|+ +....-|+.-+|++.+....+++-|+.|++|-|..++++..+.++|..+-..+..+ .++ ..+
T Consensus 72 ------~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 72 ------NSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH 144 (480)
T ss_pred ------HHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence 33556 77788899999999999999999999999999999999999999999987555333 344 777
Q ss_pred HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh------cCCch--hhhhhchhh
Q psy14136 163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH------YGWRS--VFYTTGSLG 233 (534)
Q Consensus 163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~--~f~i~~~~~ 233 (534)
.+..+.+.++-+.......+..-|+++++|..+..+- .+..+|.++|.++...+..+ ..|.. .|+..++++
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~ 224 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLA 224 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHH
Confidence 8999999999888888889999999999999999954 67778888888777777654 34655 466555665
Q ss_pred HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136 234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY 313 (534)
Q Consensus 234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (534)
.+.+++..+..++.|+.++....+... ..+...+.++.++++++.+..+.+......+++..+.+-.-
T Consensus 225 ~l~l~l~~~~~~~~P~tPps~s~~~~~------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~ 292 (480)
T KOG2563|consen 225 ALLLALVLFVFTKKPPTPPSASQAALQ------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLA 292 (480)
T ss_pred HHHHHHHHHhcCCCCCCCCchhHhhhh------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhc
Confidence 555555666666655554433222211 12245577889999999999999888888888887776655
Q ss_pred hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH---HHHHhhcCCchhHH
Q psy14136 314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL---VMLIGYLGCNVALV 390 (534)
Q Consensus 314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 390 (534)
+.. .|++...+|+......+++++++++.|.+.||.+..+.. +.+.+....++ +..........+.+
T Consensus 293 l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~---------~~v~~~~~~v~~~~l~~~t~~~~~~viv 362 (480)
T KOG2563|consen 293 LCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT---------TLVLYLFALVGTLMLLTCTLFLGDSVIV 362 (480)
T ss_pred ccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH---------HHHHHHHHHHHHHHHHHhhccCCceEeh
Confidence 554 588888999999999999999999999999998776542 22222222222 22222223244455
Q ss_pred HHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHH
Q psy14136 391 LITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGS 468 (534)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~ 468 (534)
.......+++.....|...-...| .+|..-++..|+.+..+++.+++-.++.+...+..+. .+ +...-+.+...++
T Consensus 363 ~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~ 440 (480)
T KOG2563|consen 363 FTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP--PGNTFPANIFLTVSAL 440 (480)
T ss_pred hhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC--CCCCccchhHhHHHHH
Confidence 555556666666667766666655 5788888899999999999999999998888776211 12 3333444444444
Q ss_pred HHHHHHHhhcCC
Q psy14136 469 CTYFFYQVLGTS 480 (534)
Q Consensus 469 ~~~~~~~~~~~~ 480 (534)
+++++..++++.
T Consensus 441 l~~~lva~~r~~ 452 (480)
T KOG2563|consen 441 LGAILVAFFRPD 452 (480)
T ss_pred HHHHHHhhhhhh
Confidence 445444444443
No 108
>PRK09669 putative symporter YagG; Provisional
Probab=99.88 E-value=6.1e-21 Score=196.33 Aligned_cols=325 Identities=11% Similarity=0.015 Sum_probs=217.3
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCe-ehhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTK-TVFGFSQLVTAICSLLIPQAA----VLHYGALIALR 165 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~i~~~l~~~a~----~~~~~~l~~~r 165 (534)
.+++|+++.++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.+++-... ...+..+++..
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 66899999999999999999999999999999999 7875 456667777777665432221 11245666666
Q ss_pred HHHhhhhcchhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136 166 SIQGIASGLTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW 236 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~ 236 (534)
++.+++.........++.+|+. ++++|.+..+.. .+..+|..+++.+...+.. ..+|+..+.+.++++++.
T Consensus 117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7777777777777889999998 557899877744 5566666666554433332 347888888888877776
Q ss_pred HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136 237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT 316 (534)
Q Consensus 237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (534)
.+..++..+|.+++.+ + ++.+....++.++|||.++.+++..++............+.|.+.
T Consensus 197 ~~~~~~~~~e~~~~~~----~--------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~ 258 (444)
T PRK09669 197 FFCCFFMTKERYTPEV----D--------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNY 258 (444)
T ss_pred HHHHhCCeEEecCCCC----c--------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeee
Confidence 6666666565422210 0 001123456788999999888777766655554444444444443
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHHHhhcCCchhHHHHHHH
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVMLIGYLGCNVALVLITWF 395 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 395 (534)
..+ +....+.+.....+..+++.++.+++.||+|+|+.+ ..+.++..+ .+......+.+.+...+..+
T Consensus 259 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
T PRK09669 259 VLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF----------KWTIVAFVILSALIFFIPPSNVWLIFALNI 327 (444)
T ss_pred ecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 333 223334445555677788889999999999988753 222222222 22122222324555566666
Q ss_pred HHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 396 VAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+.+++.+...+...+...|..+ ++ .|..+|..+....+|..+++.+.|.+.+.
T Consensus 328 i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 328 LFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777778888877653 22 57788999999999999999999998875
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=2.5e-20 Score=181.26 Aligned_cols=277 Identities=9% Similarity=0.013 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh---------------
Q psy14136 156 LHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--------------- 219 (534)
Q Consensus 156 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--------------- 219 (534)
.+|+.++++-++.|.|.+...+....++++..+++++++.++ .+...++|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 589999999999999999999999999999999999999999 6689999999999999987731
Q ss_pred -cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH
Q psy14136 220 -YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG 298 (534)
Q Consensus 220 -~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (534)
..|+++|++.+.+.++..+++.+. + .|+.+++. +++.. .++....++.+++|.++...+..++
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~-~-~p~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~f~ 151 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFL-P-LPELQEAD-VARVS-------------SGDTTQKTSAFQFTHLVLGALGIFV 151 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-c-CCCCCccc-ccccc-------------cccccchhhHHhhHHHHHHHHHHHH
Confidence 469999997766655554433322 2 12211110 00000 0000112346778899988888888
Q ss_pred HHHHHHHHHhchhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136 299 RIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL 376 (534)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~ 376 (534)
+.....++..|.+.|+.+. +|+++.+.+...+....+.++++++.+++.||+++++.+ .++.++..+.
T Consensus 152 yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l----------~~~~~l~~~~ 221 (310)
T TIGR01272 152 YVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL----------AFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHH
Confidence 8889999999999999864 689999999999999999999999999999999987753 2333333333
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136 377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW 456 (534)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 456 (534)
.++....+ .. .......+.+++.+..+|...+...+..|++.+++.++. ....+|+.+.|.+.|.+.|. .+.
T Consensus 222 ~~l~~~~~-~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~-----~g~ 293 (310)
T TIGR01272 222 SIGAALTH-GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC-----LGI 293 (310)
T ss_pred HHHHHHcC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh-----ccc
Confidence 33333333 22 223345566788888888888888888887777777875 56779999999999999998 677
Q ss_pred HHHHHHHHHH
Q psy14136 457 RQVFLIAGAV 466 (534)
Q Consensus 457 ~~~f~~~~~~ 466 (534)
+.+|++...+
T Consensus 294 ~~a~~v~~~~ 303 (310)
T TIGR01272 294 QLAFALPVPC 303 (310)
T ss_pred hHHHHHHHHH
Confidence 7777754433
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.85 E-value=8.8e-20 Score=186.79 Aligned_cols=327 Identities=18% Similarity=0.184 Sum_probs=250.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCCee-hhHHHHHHHHHHHHHHHHH-H-H----HHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGTKT-VFGFSQLVTAICSLLIPQA-A-V----LHYGALIA 163 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~-~l~~~~~~~~i~~~l~~~a-~-~----~~~~~l~~ 163 (534)
.+.+|+++..+|.+..+..+-.++..|+.|.++| |+|||| .++++.+..+++.+++... . . .....+.+
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence 5678999999999999999999999999999999 899655 5667888888877775322 1 0 12344577
Q ss_pred HHHHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-------CCchhhhhhchhhH
Q psy14136 164 LRSIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-------GWRSVFYTTGSLGA 234 (534)
Q Consensus 164 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~i~~~~~l 234 (534)
.-++..++.........++..|..+ +++|.+..+.. .+..+|.++...+.+.+.+.. +|++..++.+++.+
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 7777799999999999999999997 46899988854 566677765555555554332 69999999999988
Q ss_pred HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136 235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM 314 (534)
Q Consensus 235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (534)
+..++.++..||.+++.+. + .++.+.+..++.+++||.++.+.+..++............+.|.
T Consensus 189 v~~~i~~~~~ke~~~~~~~---~-------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~ 252 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEVTE---Q-------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYF 252 (428)
T ss_pred HHhhhhhheeeeccccccc---c-------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 8888888887772111110 0 01133344678899999999999999998888888888888888
Q ss_pred HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHH
Q psy14136 315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLIT 393 (534)
Q Consensus 315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 393 (534)
++..|.+ ...+.+.....++.+++.++.++++||+|+|+.+ ..+.++.+++.+.+.+.+ .+.+...+.
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY----------IIGLLLAALGFLLLFFLGPGSPWLVLIL 321 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh----------hhhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 8877777 5567777788899999999999999999999875 455555555555544443 477788888
Q ss_pred HHHHHHHhhhcccccchhhhccCC--------CchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGP--------NFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++.+.+.+..+....+...|+.+ ++.|...|+.++...++..+++.+.+.+.+.
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 888888888888888888887654 2269999999999999999999999888765
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=8.4e-20 Score=188.17 Aligned_cols=324 Identities=10% Similarity=0.047 Sum_probs=210.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc----CCeehh-HHHHHHHHHHHHHHHHHHH------HHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF----GTKTVF-GFSQLVTAICSLLIPQAAV------LHYGALIA 163 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grr~~l-~~~~~~~~i~~~l~~~a~~------~~~~~l~~ 163 (534)
++.+|+++.++|.+.+...+..++..++.|+++||. ||||.. +++.+...+..++. +... ..+..++.
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 114 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FWVPTDWSHSSKVVYAYL 114 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-HhCcCCCCcchHHHHHHH
Confidence 668899999999999999999999999999999996 767644 55655555444442 2110 12233444
Q ss_pred HHHHHhhhhcchhhhHHHHHhcccCC-Ccchhhhhhh-hh-----hhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhH
Q psy14136 164 LRSIQGIASGLTWPAMYALVGHWIPS-NERSRFMSSF-QG-----FSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGA 234 (534)
Q Consensus 164 ~r~l~G~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~-~~-----~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~l 234 (534)
.-++.+++.+...+...++..+..++ ++|.+..+.. .+ ..++..++|.+++...... +|.....+.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~ 194 (448)
T PRK09848 115 TYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGM 194 (448)
T ss_pred HHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 55677888888888888887777644 6788776543 22 2345555665554332111 12111122233333
Q ss_pred HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136 235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM 314 (534)
Q Consensus 235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (534)
+..++.+...||+++.+. ++...+..++.+++||.++...+..++............|.|+
T Consensus 195 ~~~~~~~~~~~e~~~~~~-------------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (448)
T PRK09848 195 VLYFICFKSTRENVVRIV-------------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYV 255 (448)
T ss_pred HHHHHHHcCcEeccCCCc-------------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeE
Confidence 333333333344322110 0011223467899999999998888888888888888888898
Q ss_pred HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHH
Q psy14136 315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLIT 393 (534)
Q Consensus 315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 393 (534)
++.+|.+....++......++.+++.++.+++.||+++|+.+ .++.++..++.+.+.+.+ .+.+.....
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~----------~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF----------LIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 888887766555555444667888999999999999988753 344444444444443332 234444444
Q ss_pred HHHHHHHhhhcccccchhhhccCCC--------chhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGPN--------FAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~--------~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++.+.+.+...+...+...|..|. ++|..+|+.++...+|..+++.+.|.+.+.
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556666777777777777666542 259999999999999999999999887654
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=9.4e-18 Score=161.00 Aligned_cols=354 Identities=14% Similarity=0.054 Sum_probs=259.4
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcchhhh
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFS-QLVTAICSLLIPQAAV-LHYGALIALRSIQGIASGLTWPA 178 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~-~~~~~i~~~l~~~a~~-~~~~~l~~~r~l~G~g~g~~~~~ 178 (534)
+.+..|...++..+..++.+|+.|.++|+.|+||..+.. .++..+..++..++.. ..++..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 345678889999999999999999999999977655544 4444444444434432 14566677778888999999999
Q ss_pred HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHH--HHh-h---------------hhcCCchhhhhhchhhHHHHHH
Q psy14136 179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLC--GFL-I---------------AHYGWRSVFYTTGSLGAIWCVA 239 (534)
Q Consensus 179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~--~~l-~---------------~~~gwr~~f~i~~~~~li~~i~ 239 (534)
-.+++.+..++++-++..+ -+....+|+.+.-.+. ..+ . +...=|..+.+.++-.++..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 9999999999999898888 5566677766544432 111 1 1123577788888888888777
Q ss_pred hhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC
Q psy14136 240 WWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG 319 (534)
Q Consensus 240 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 319 (534)
.++..++.++...+....-.... ++.+..++++.+++.+....+..+...=+...+......|....+|
T Consensus 216 m~~~v~~~~~~~~~~~~~l~~g~-----------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~g 284 (438)
T COG2270 216 MILNVHDAEKISSPPPTALRNGF-----------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLG 284 (438)
T ss_pred HHhcccccccccccchHHHHHHH-----------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence 77777776543211100000000 1123356778888888999999999988899999999999998899
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT 399 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (534)
++..+..++.....+..++++++.|++.||++.|+.+ .++.++..+..+...+.. .....++..++.+.
T Consensus 285 ls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~~~~~~~~~~~~-~~~~f~i~gll~g~ 353 (438)
T COG2270 285 LSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVILSIAALYLIFLE-GELDFWILGLLVGT 353 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999775 334444333333333333 34444455566677
Q ss_pred HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
+.|..++..-++..+..|+. .++.+|+++..+.....+||++.+.+.+. + +.-+..+....++..++.+..+..+
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i--T--g~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI--T--GSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH--h--cchhhHHHHHHHHHHhhHhhEEeec
Confidence 77888888888888888865 99999999999999999999999999988 3 4567778887777777777766655
Q ss_pred CC
Q psy14136 479 TS 480 (534)
Q Consensus 479 ~~ 480 (534)
.+
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 44
No 113
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=2.4e-18 Score=177.08 Aligned_cols=322 Identities=14% Similarity=0.045 Sum_probs=205.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCee-hhHHHHHHHHHHHHHHHHHHHHH------HHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKT-VFGFSQLVTAICSLLIPQAAVLH------YGALIA 163 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~~~~------~~~l~~ 163 (534)
.+.+|+++..+|.+..+.-+--++.-|+.|.++|| +|||| .++++.+..+++.+++ +.. ++ +..+.+
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll-f~~-p~~s~~~~~~y~~~ 114 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA-YST-PDLSMNGKMIYAAI 114 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH-HhC-CCCCcchHHHHHHH
Confidence 56889999999999999999999999999999996 68765 4556767777776653 221 21 445566
Q ss_pred HHHHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-------cCCchhhhhhchhhH
Q psy14136 164 LRSIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-------YGWRSVFYTTGSLGA 234 (534)
Q Consensus 164 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~i~~~~~l 234 (534)
.-++..++..+....-.++..|..+ ++||.+..++. .+..+|..+++.+...+.+. .+|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6667788888888888999999986 68899999955 56777777776665444433 257777777777766
Q ss_pred HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136 235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM 314 (534)
Q Consensus 235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (534)
++..+++...+|.++.++ + +.+.+...+..++||.++.+....++..............|.
T Consensus 195 i~~~i~~~~~kE~~~~~~-----~--------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~ 255 (460)
T PRK11462 195 MMLAFCFFTTKERVEAPP-----T--------------TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYV 255 (460)
T ss_pred HHHHHHHhcceeccCCCc-----c--------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhh
Confidence 666555555455332110 0 011223456788888887776666555555444444444444
Q ss_pred HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC-chhHHHHH
Q psy14136 315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC-NVALVLIT 393 (534)
Q Consensus 315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 393 (534)
+...|.+ ...+.+.....++.+++.++++++.||+++|+.+ ..+..+..+..+++.+.+. +.....+.
T Consensus 256 ~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 256 TWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----------WWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred hhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 4444433 3344556677788889999999999999987643 1111111111111222221 22223333
Q ss_pred HHHHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++.+++.+...+..+....|... ++ .|..++.......+|..+++.+.|.+.+.
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555555432 22 46667777788999999999988887754
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.80 E-value=6.5e-18 Score=167.40 Aligned_cols=330 Identities=16% Similarity=0.102 Sum_probs=247.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCe-ehhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTK-TVFGFSQLVTAICSLLIPQAA----VLHYGALIALR 165 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~i~~~l~~~a~----~~~~~~l~~~r 165 (534)
.+.+|+++..+|.+..+.-+--++.-|+.|.+.|| +||| +.++++.+-.++.+.++-.+. ..++...++.-
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 66899999999999999999999999999999996 6765 466777788888777752221 01355666777
Q ss_pred HHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136 166 SIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW 236 (534)
Q Consensus 166 ~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~ 236 (534)
++.+++.......-.++.++..+ ++||.+..+.. .+.++|..+...+...+.. ..||+..-.+.++++.+.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 88889999888889999999884 57899988855 5566665554444433332 357888888888888888
Q ss_pred HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136 237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT 316 (534)
Q Consensus 237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (534)
.+.+++..+|.+.+....++. .+.+.+..+..+++||++...++..++...+..........|.+.
T Consensus 200 ~l~~~~~v~ER~~~~~~~~~~--------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y 265 (467)
T COG2211 200 LLFCFFNVKERVVETQPTKTG--------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHhhcccCccccCccc--------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE
Confidence 888888888766532211110 012222345568899999999888888888888778888888888
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHH
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWF 395 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 395 (534)
..|.+.............+.+++.++..++.+|+|+|+.+ .++.++..+..+.+.+.+ .+....++..+
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----------~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~ 335 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----------LIGLLLLAVGYLLLYFTPAGSVVLIVVALI 335 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH----------HHHHHHHHHHHHHHHhhcCcchHHHHHHHH
Confidence 8888888887888787888888899999999999999874 444555555555444444 34566666668
Q ss_pred HHHHHhhhcccccchhhhccC-------CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 396 VAVTLITASYAGAMANVVDIG-------PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~-------p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+.+.+.+...+..++.+.|.. .++ .|...|...++..+|.+++..+.|++.+.
T Consensus 336 i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 336 IAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999998888652 223 78899999999999999999888888765
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.78 E-value=1.6e-16 Score=153.15 Aligned_cols=357 Identities=15% Similarity=0.102 Sum_probs=255.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----Ceeh-hHHHHHHHHHHHHHHHHHH----H-------HH--
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTV-FGFSQLVTAICSLLIPQAA----V-------LH-- 157 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~-l~~~~~~~~i~~~l~~~a~----~-------~~-- 157 (534)
|+++...-.+.+.++..+... ..+.+|+.+|+.+ ||.. +..|.++.+.+..+.+++. . +.
T Consensus 9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 889999999999999888764 6889999999998 7754 5556677666666655441 1 11
Q ss_pred -HHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhh---hhhchh
Q psy14136 158 -YGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVF---YTTGSL 232 (534)
Q Consensus 158 -~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f---~i~~~~ 232 (534)
.......-.+.|+|.+.......++++|..|+++|+++.+ +|...-+|.+++..+.+.+.+.+.-.-.. ...+++
T Consensus 88 g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 1234445678899999999999999999999999999999 78888899999999999888776532222 222222
Q ss_pred hHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhh
Q psy14136 233 GAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPR 312 (534)
Q Consensus 233 ~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (534)
.++..++.. +-.|++..+. .+. .+++.......+++++.+|+...+....++...++..--..+-+
T Consensus 168 ~~~l~~ia~-wg~E~r~~~~-~~~------------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 168 ALLLNLIAL-WGQEPRRSRR-AAA------------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHH-HhcccCCccc-ccC------------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 222222222 2223222111 100 00011333446778888888888888888888888888888889
Q ss_pred hhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHH---HhhcCCchh
Q psy14136 313 YMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVML---IGYLGCNVA 388 (534)
Q Consensus 313 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 388 (534)
|--+++|++..+...+......+.+++..+.|++..| .++++. ..+++....+++.. .+... +.+
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~----------a~~G~~~~~~~f~lii~a~~~~-~~~ 302 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT----------AALGCLLGALAFALIILAGPLG-SPW 302 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH----------HHHHHHHHHHHHHHHHHHHhcc-cch
Confidence 9999999999999999999999999999999988774 333322 23344443333333 23333 677
Q ss_pred HHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccc----cc-cChhhHHHHHHH
Q psy14136 389 LVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQD----DE-TSLESWRQVFLI 462 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----~~-~~~~~~~~~f~~ 462 (534)
.+....++.+++.|.........+.+..+ ++.|..+|.....+.+...++..++|.+.|. .+ +...+|..+|.+
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~l 382 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFAL 382 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence 77888888888888888888888888775 5599999999999999999999999988874 11 233688888988
Q ss_pred HHHHHHHHHHHHHhhcC
Q psy14136 463 AGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 463 ~~~~~~~~~~~~~~~~~ 479 (534)
-+++.++++.+...+.+
T Consensus 383 Ea~ll~~a~~ll~~l~~ 399 (403)
T PF03209_consen 383 EAVLLLAALVLLGRLDR 399 (403)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 88888877776655433
No 116
>KOG3626|consensus
Probab=99.78 E-value=1.3e-17 Score=171.92 Aligned_cols=259 Identities=15% Similarity=0.216 Sum_probs=206.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------------H--------
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------------A-------- 154 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------------~-------- 154 (534)
++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++++++++- .
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 77999999999999999999999999999999999999999999999999999997541 0
Q ss_pred ---------------------------H-H--HHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhh
Q psy14136 155 ---------------------------V-L--HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFS 203 (534)
Q Consensus 155 ---------------------------~-~--~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~ 203 (534)
. + -+..++.+.++.|+|....++...+++-|...+++-+..+| +++...
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 0 0 12367789999999999999999999999999999999999 667888
Q ss_pred hHHHhhhhHHHHhhhhc-------------------CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhh
Q psy14136 204 FGIGLTYPLCGFLIAHY-------------------GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQE 264 (534)
Q Consensus 204 ~G~~~g~~l~~~l~~~~-------------------gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~ 264 (534)
+|.++|-++++++.+.+ -|..-|++.+.+.++..+..+++.++.|+..++.+.++.+..++
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~ 363 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKT 363 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhccccc
Confidence 99999999998887531 27777888888888888888877666665443322222221111
Q ss_pred ccC---cccc---CCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHH
Q psy14136 265 NIE---PTIV---GSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSY 337 (534)
Q Consensus 265 ~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~ 337 (534)
+-. .... +.++.+...+++++||.+....+...+....+.++.+++|-|++..+|.+...+..+.....+ +..
T Consensus 364 ~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~ 443 (735)
T KOG3626|consen 364 ESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAA 443 (735)
T ss_pred ccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhh
Confidence 111 0000 012233456788999999999999999999999999999999999999999999998866665 666
Q ss_pred HHHHHHHHHHHHHhhh
Q psy14136 338 LSSVLFCYLADQLFVR 353 (534)
Q Consensus 338 ~~~~~~g~l~dr~~~~ 353 (534)
+|.+++|++..|++.+
T Consensus 444 ~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 444 VGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhccceeeeeeccc
Confidence 7888888999987654
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.78 E-value=1.3e-16 Score=156.62 Aligned_cols=376 Identities=16% Similarity=0.137 Sum_probs=237.9
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
.+|.|+++..-+.+.|..-.-+...++||++||+ |+|+++..|.++.++|.++.+.....+...++++-.+.++|.|..
T Consensus 55 gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~ 134 (498)
T COG3104 55 GLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLF 134 (498)
T ss_pred cCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccc
Confidence 4789999998889988888889999999999996 999999999999999999954431125778889999999999999
Q ss_pred hhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC---CC-
Q psy14136 176 WPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD---AP- 248 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~---~p- 248 (534)
-+...+++.|.+|+++ |-..++ .|.+.++|+.++|.+.+++.+++||+..|.+.++-..+.++..++..+. .+
T Consensus 135 K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~ 214 (498)
T COG3104 135 KPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGG 214 (498)
T ss_pred cccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCC
Confidence 9999999999998754 555666 6689999999999999999999999999998877666655544433221 11
Q ss_pred --CCCcccchhhhhh-h--------hh----ccCccccC-----------C--CCCcccHHHhhcC-HHHH---HHHHHH
Q psy14136 249 --LKHPRITRKELDY-I--------QE----NIEPTIVG-----------S--KGLKVPWVSILTS-PPAW---AIGITT 296 (534)
Q Consensus 249 --~~~~~~~~~~~~~-~--------~~----~~~~~~~~-----------~--~~~~~~~~~~~~~-~~~~---~~~~~~ 296 (534)
++.+. +..+... . .. .+..+... . -.....+.+...+ ++.+ .+.+..
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~ 293 (498)
T COG3104 215 VPDPNPL-SFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFA 293 (498)
T ss_pred CCCccch-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 11111 1000000 0 00 00000000 0 0000000000011 1222 222222
Q ss_pred HHHHHHHHHHHhchhhhhHhh-----hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q psy14136 297 FGRIWVHYIFIIPGPRYMKTI-----LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371 (534)
Q Consensus 297 ~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 371 (534)
......+....+-+..|..+. +|++ ...++..+...+.-++..++..++..|.++++. ......| ..+++.
T Consensus 294 ~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~-~ps~~~K--FalGl~ 369 (498)
T COG3104 294 VIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNK-QPSTPIK--FALGLI 369 (498)
T ss_pred HHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC-CCCcchH--HHHHHH
Confidence 222222222233334444332 2222 345778888899999999999999888666532 1111122 344555
Q ss_pred HHHHHHHHHhhc---------CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136 372 IPALLVMLIGYL---------GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 372 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
+++.+++++... ..+.++.+...++..++.-+..|...+.+....|+. .+.+++........|..++..+
T Consensus 370 l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~v 449 (498)
T COG3104 370 LAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQV 449 (498)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhcee
Confidence 555544443332 125677888888888888899999999999999988 8888888887777777777766
Q ss_pred hhhccccc-ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 442 AGYFLQDD-ETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 442 ~g~l~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+.-.+.. ..........|+..+.+.++.....+..
T Consensus 450 a~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 450 AGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred cccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 65311110 0111455667777777666655554444
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.75 E-value=1e-19 Score=187.99 Aligned_cols=259 Identities=17% Similarity=0.217 Sum_probs=3.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------------H--------
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------------A-------- 154 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------------~-------- 154 (534)
++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+.+|.++.++|++++++= .
T Consensus 30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 77999999999999999999999999999999999999999999999999999986430 0
Q ss_pred ----H------------------------HHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhH
Q psy14136 155 ----V------------------------LHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFG 205 (534)
Q Consensus 155 ----~------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G 205 (534)
. .-+..++++.++.|+|....++...+++=|..++++-+..+| +++...+|
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG 189 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG 189 (539)
T ss_dssp ------------------------------------------SSS-----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence 0 014678889999999999999999999999999999999999 66888899
Q ss_pred HHhhhhHHHHhhhh---------------------c-CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhh
Q psy14136 206 IGLTYPLCGFLIAH---------------------Y-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQ 263 (534)
Q Consensus 206 ~~~g~~l~~~l~~~---------------------~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~ 263 (534)
.++|..+++.+.+. . .|..-|++.+++.++..+..+++.++-|+..+..+.++.++.+
T Consensus 190 Pa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~ 269 (539)
T PF03137_consen 190 PALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERK 269 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcc
Confidence 99998888877643 1 2777788888888887777777755555542111111110000
Q ss_pred ------hccCccc------cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhh
Q psy14136 264 ------ENIEPTI------VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGA 331 (534)
Q Consensus 264 ------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 331 (534)
+...+++ ...+......+++++||.+....+..........++.++.|.|++..++.++.+++++...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~ 349 (539)
T PF03137_consen 270 EEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGI 349 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 0000000 1113334456888999999999999999999999999999999999999999999988866
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhh
Q psy14136 332 PFL-CSYLSSVLFCYLADQLFVR 353 (534)
Q Consensus 332 ~~~-~~~~~~~~~g~l~dr~~~~ 353 (534)
..+ +..+|.+++|++.+|++-+
T Consensus 350 v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 350 VSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp -----------------------
T ss_pred hhcchhheehheEEEEEEEecCc
Confidence 665 7778999999999998654
No 119
>KOG2325|consensus
Probab=99.70 E-value=2.3e-15 Score=149.71 Aligned_cols=355 Identities=14% Similarity=0.163 Sum_probs=220.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCC-eehhHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHhhhh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT-KTVFGFSQLVTAICSLLI-PQAAVL--HYGALIALRSIQGIAS 172 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~~l~-~~a~~~--~~~~l~~~r~l~G~g~ 172 (534)
|.+.+.+..||+.++..++.+++++..|+...|.+. |+.++.+.++..+|.++. .+...+ .-+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 678888999999999999999999999999999997 889999999999999986 333222 4688999999999997
Q ss_pred cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cC-----------CchhhhhhchhhHHHHH
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YG-----------WRSVFYTTGSLGAIWCV 238 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~g-----------wr~~f~i~~~~~li~~i 238 (534)
| ......+++++-...++|.++++ ...+..+|.++||.+...+... -| +..+-|+.+++.++..+
T Consensus 145 ~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 G-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred c-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 6 57889999999998999999999 5567778888888777665432 11 23456777888888888
Q ss_pred HhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh
Q psy14136 239 AWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL 318 (534)
Q Consensus 239 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 318 (534)
..+++.+|.+++....+.++.++. +.++++.+..+.++ +..+.+.+..+...+......+..+.+....+
T Consensus 224 ~i~~~f~E~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y 293 (488)
T KOG2325|consen 224 IILFFFKEVYRGIIDKKKRSVEEE----KSDIEKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMY 293 (488)
T ss_pred HHHhheeecccCccccccccchhh----ccchhhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHh
Confidence 888888887655432211111000 00000011111111 23445555556666666666677777777778
Q ss_pred CCccccchhHh----hhHHHHHHHHHHHHHHHH-HHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH----hhcCC----
Q psy14136 319 GFSIQTNGLLT----GAPFLCSYLSSVLFCYLA-DQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI----GYLGC---- 385 (534)
Q Consensus 319 g~s~~~~~~~~----~~~~~~~~~~~~~~g~l~-dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---- 385 (534)
+++.+++.... ++.++..+...+...... .++.+|+.+ ..+.+....+..+. .+...
T Consensus 294 ~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~----------~~g~l~~f~~~~i~~yp~~~~s~pv~~ 363 (488)
T KOG2325|consen 294 GWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRII----------LLGFLIFFLSYYIFTYPWGFYSGPVQP 363 (488)
T ss_pred ccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceee----------eehHHHHHHhhheeeeecccccccccc
Confidence 88776654433 333333333333322222 122223322 12212222222111 11100
Q ss_pred -----------ch--------hHHHHHHHHHHHHhhhcccc----cchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHh
Q psy14136 386 -----------NV--------ALVLITWFVAVTLITASYAG----AMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 386 -----------~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
.. .......+......|...|. ..+.-++ +-|+++++..|++......+..++|.+
T Consensus 364 ~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~ 443 (488)
T KOG2325|consen 364 YNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIF 443 (488)
T ss_pred ccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHH
Confidence 00 00111112222233333332 2233344 457779999999999999999999999
Q ss_pred hhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 442 AGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 442 ~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
...+... .|++..+.+.....++...++...
T Consensus 444 ~t~~~~~-----~g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 444 STAIFTL-----SGPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred HhhhHHh-----cCccHHHHHHHHHHHHHHHHHHHH
Confidence 9888888 778887777666666555554443
No 120
>KOG2816|consensus
Probab=99.67 E-value=1e-14 Score=147.18 Aligned_cols=317 Identities=15% Similarity=0.149 Sum_probs=224.3
Q ss_pred HHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cchhhhHHHHHhcccC
Q psy14136 111 SFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS--GLTWPAMYALVGHWIP 188 (534)
Q Consensus 111 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~--g~~~~~~~~~i~~~~~ 188 (534)
...+...+.++..|.++||+|||..+.+..+...+..+...+. .+|.++ +.|+.. ++......++++|...
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~---~~~~~~----~~~l~g~~~~~~s~~~a~vadis~ 142 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ---GYWFFL----LLGLSGGFSAIFSVGFAYVADISS 142 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH---HHHHhh----hcccccchhhhhhhhhhheeeccc
Confidence 4467778889999999999999999999999999888775443 444444 444433 3457788899999999
Q ss_pred CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccC
Q psy14136 189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIE 267 (534)
Q Consensus 189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 267 (534)
.++|....| +.....++..++|.+++.+.+..|.-..|++..+..++..+..++++||+-.++.+.. .+..... ...
T Consensus 143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~-~~~ 220 (463)
T KOG2816|consen 143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELT-PGS 220 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccC-CCc
Confidence 999999999 5567999999999999999999999999999999999999988889988755443321 0000000 000
Q ss_pred ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHH-HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHH-H
Q psy14136 268 PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYI-FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFC-Y 345 (534)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~ 345 (534)
....+..+.....++.-.+|..+.+++..+.......+ ..-..+.|+...++++..+.+.+.+..+....++.++.. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~ 300 (463)
T KOG2816|consen 221 LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPL 300 (463)
T ss_pred ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011111112222345556555555555444433 232557888889999999999999999999999888888 6
Q ss_pred HHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccC-CCchhHHH
Q psy14136 346 LADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIG-PNFAGPIL 424 (534)
Q Consensus 346 l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~ 424 (534)
+...++.++. ...+...-.+....+.+.. +.|..+....+. .......+...+...... ++++|++.
T Consensus 301 l~~~l~~~~~----------i~lGl~~~~~~~~~~af~~-~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e~g~v~ 368 (463)
T KOG2816|consen 301 LSSILGEKRL----------ISLGLLSEFLQLLLFAFAT-ETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPEEQGKVF 368 (463)
T ss_pred HHHHHhhhhH----------hhHHHHHHHHHHHHHHHhc-cchhhhHHHHHH-HhhcchhHHHHhHHHhhcccccccchh
Confidence 6667777653 4677777777777777776 555444444443 334555666666666655 45699999
Q ss_pred HHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 425 AFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 425 g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
++...+..+.+.++|.+.+.++..
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHHHHH
Confidence 999999999999999999888654
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.55 E-value=9.7e-14 Score=141.15 Aligned_cols=375 Identities=14% Similarity=0.132 Sum_probs=216.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----CeehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTVFGFSQLVTAICSLLIPQAAV--LHYGALIALRSI 167 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~i~~~l~~~a~~--~~~~~l~~~r~l 167 (534)
++++|+++++...+.+...+...+ .++.|.++|.+- ||+-++++.++.+++.+..+.... .+.....+.-++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 779999999999999999998765 567899999873 555667777777655554433211 256666777788
Q ss_pred HhhhhcchhhhHHHHHhcccCC--Ccchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136 168 QGIASGLTWPAMYALVGHWIPS--NERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~--~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~ 244 (534)
..+|.+....++-+++.|...+ ++|+...+ .+....+|.+++..++|.+.+..++|..|.+.+++.++..+..+++.
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999843 33566666 55678899999999999999999999999999888888777777666
Q ss_pred cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHH-HHHHHHHHHHHHHhchhhhhHhhhC---C
Q psy14136 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGI-TTFGRIWVHYIFIIPGPRYMKTILG---F 320 (534)
Q Consensus 245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g---~ 320 (534)
+|.++. +..+....++ +.........++.....++.++.|.+|...+ ..++............-.+..+..+ +
T Consensus 176 ~e~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~f 252 (433)
T PF03092_consen 176 EERKVR-PADEVFSFGK--EEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHF 252 (433)
T ss_pred hhcccc-ccchhhcccc--cccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccccccc
Confidence 652211 1110000000 0000000001122334566777788776665 2222222111110100011222344 5
Q ss_pred ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-C-------chhHHHH
Q psy14136 321 SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-C-------NVALVLI 392 (534)
Q Consensus 321 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~ 392 (534)
++...+.+..+..++.+++..+. +|+.+++.. |+.+.....+.....+.-+.... . +.+..+.
T Consensus 253 s~~f~~~~~~vg~~~~l~g~~~y----~~~~~~~~~-----R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lg 323 (433)
T PF03092_consen 253 SPSFYGTLSIVGSIASLLGILLY----RKYFSNWSW-----RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALG 323 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH----HHHHhCCCH-----HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEE
Confidence 66555555544444444444444 444443332 22222222222111111111110 0 1122222
Q ss_pred HHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc---cChhhHHHHHHHHHHHHH
Q psy14136 393 TWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE---TSLESWRQVFLIAGAVGS 468 (534)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~---~~~~~~~~~f~~~~~~~~ 468 (534)
-.++........+-.......++.|+. -|+..++...+.++|..++..++..+.+..+ +...+.....++..++.+
T Consensus 324 d~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~l 403 (433)
T PF03092_consen 324 DTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQL 403 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHH
Confidence 333334444444445566777888877 9999999999999999988888877765421 112233444445555554
Q ss_pred HHHHHHHhhcCCcc
Q psy14136 469 CTYFFYQVLGTSEV 482 (534)
Q Consensus 469 ~~~~~~~~~~~~~~ 482 (534)
+.+.+..+++++++
T Consensus 404 l~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 404 LPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHcCCCch
Confidence 44444445555433
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.55 E-value=1.1e-14 Score=124.15 Aligned_cols=137 Identities=25% Similarity=0.381 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhccc
Q psy14136 108 ILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWI 187 (534)
Q Consensus 108 ~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 187 (534)
+.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+. ++++.+.+.+++.|++.+...+....++.|.+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 3456778889999999999999999999999999999888775444 68889999999999999999999999999999
Q ss_pred CCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 188 PSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 188 ~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
|+++|++..+ ......+|..+++.+.+.+.+..+|++.|++.+++.++..+..+++.||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999 4578899999999999999998999999999888877776666665544
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.51 E-value=9.3e-13 Score=125.38 Aligned_cols=233 Identities=17% Similarity=0.173 Sum_probs=166.0
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
+++|.+..|++.+....+...++.+++.|.++||+|||+..+..+++.+++++.. .+++++.++++|++.|++.+..
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k---~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999998763 3468999999999999999988
Q ss_pred hhhHHHHHhcccCC-Ccchhhhh-hhh-----hhhhHHHhhhhHHHHhhhhcCC--chhhhhhchhhHHHHHHhhhhccC
Q psy14136 176 WPAMYALVGHWIPS-NERSRFMS-SFQ-----GFSFGIGLTYPLCGFLIAHYGW--RSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 176 ~~~~~~~i~~~~~~-~~r~~~~~-~~~-----~~~~G~~~g~~l~~~l~~~~gw--r~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
..+--+++..-..+ +.+....+ .+. ..++-.+++..++.++.+..+. ..+|....++.++..+++....+|
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 88877765433322 21223333 221 1233345555666666666554 788988877777776666655566
Q ss_pred CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hchhhhhHhhhCCccccc
Q psy14136 247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI-IPGPRYMKTILGFSIQTN 325 (534)
Q Consensus 247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~s~~~~ 325 (534)
...+..... +.. ++.+..++.+++||+++.+.++..+.-...+.+. .|.|..-.+ -...-.
T Consensus 219 Nyg~~~~~~-~~~--------------~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~---~~~~P~ 280 (354)
T PF05631_consen 219 NYGDTSSSS-SLS--------------GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD---DEELPL 280 (354)
T ss_pred cCCCccccc-chH--------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC---CCCCCc
Confidence 543321110 000 1112245678889999999999888888877764 567766422 123347
Q ss_pred hhHhhhHHHHHHHHHHHHHHHHHH
Q psy14136 326 GLLTGAPFLCSYLSSVLFCYLADQ 349 (534)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~l~dr 349 (534)
|++++.+.++.++|+-+..++..|
T Consensus 281 GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 281 GLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999999888765554
No 124
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=3.8e-13 Score=129.41 Aligned_cols=180 Identities=19% Similarity=0.244 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 367 (534)
.++...+.+...++.--.+..-.|...++ .++|..+.|.+.+...+..-++.++.|.++||.+.|+.+ .
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm----------~ 98 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM----------A 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee----------h
Confidence 34455555666666666666667766665 789999999999999999999999999999999998764 7
Q ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh--hh
Q psy14136 368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA--GY 444 (534)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~--g~ 444 (534)
+++++.++..+++++.+ +.....+++.+-+.+.+..+|.....+...+|++ ||+..++.++..++|+.+.|.+. +.
T Consensus 99 ~gLilsai~nil~Gfs~-s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 99 FGLILSAIVNILFGFSP-SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred HHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 88889999999999988 8888888999999999999999999999988876 99999999999999999999999 88
Q ss_pred cccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q psy14136 445 FLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484 (534)
Q Consensus 445 l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 484 (534)
+.++ .+|+..|++-+++.++..++.++..+.++++
T Consensus 178 ~~~~-----~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 178 FAFH-----GGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred HHhc-----cchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 8888 7999999999998888777777766555443
No 125
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.47 E-value=2.7e-12 Score=131.75 Aligned_cols=170 Identities=18% Similarity=0.225 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 367 (534)
.++...+..++.++....+..++|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+ .
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~----------~ 92 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM----------G 92 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH----------H
Confidence 34445555555555556677788888877 899999999999999999999999999999999998763 5
Q ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
++.++.+++.++....+ +.+...+..++.+++.+...+.....+.+.+|++ |++++|+.+....+|..++|.+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 171 (434)
T PRK11663 93 IGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA 171 (434)
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666554 5555555555666777777777788888888865 999999999999999999999999998
Q ss_pred cccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 447 QDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
+. .+|+..|++.+++.++..+..
T Consensus 172 ~~-----~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 172 LH-----YGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred Hc-----ccHHHHHHHHHHHHHHHHHHH
Confidence 88 799999998887665544433
No 126
>PRK10054 putative transporter; Provisional
Probab=99.45 E-value=1.1e-12 Score=132.68 Aligned_cols=173 Identities=15% Similarity=0.084 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
|.++.+.+..++...+......++|.|+++.+|++..+.++..+...++.++..+..|+++||+|+|+.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~---------- 76 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM---------- 76 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH----------
Confidence 4577777888888888888899999999988999999999999999999999999999999999998763
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
.++.++..+....+.+.+ +.+..++...+.+...+...+....+..|..|++ |+++.|+.+...++|..++|.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 77 LLAITAFASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555554 4444444444444444455555667777877655 99999999999999999999999988
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.+ .+|+..|++.+++.+++.++..+
T Consensus 156 ~~------~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 156 VM------QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HH------hccCcHHHHHHHHHHHHHHHHHH
Confidence 64 36888998888777766554433
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.43 E-value=9.1e-13 Score=137.34 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=119.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI-PQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~-~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+.+ ....+++...+++++++.|++.+..
T Consensus 280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 359 (490)
T PRK10642 280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCF 359 (490)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 678888888888889999999999999999999999999888876555443332 1222345777888999999888777
Q ss_pred hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136 176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~ 251 (534)
......++.|.+|++.|+++++ .+....+++.++|.+.+++.+.. +|+.++++..+++++..+..+ ++||+|+..
T Consensus 360 ~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~ 436 (490)
T PRK10642 360 TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCC
Confidence 7888889999999999999999 56666667788898888888764 478777776666666555444 568887653
No 128
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.42 E-value=5e-12 Score=129.04 Aligned_cols=175 Identities=13% Similarity=0.111 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVF 365 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~ 365 (534)
+.++.++.......+.++++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+.+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i--------- 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV--------- 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH---------
Confidence 5677777788888889999999999999988999999999999999999999999999999999 998763
Q ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC---chhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN---FAGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
.++.++..++.+++...........+...+...+.+...+...+++.|.+|+ +|.++.++.....++|+.++|.+.
T Consensus 80 -liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 80 -MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred -HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 4555555555444433221222233333334455555556667788898874 399999999999999999999999
Q ss_pred hhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
|++.+. .+|+..|.+.++.++++++.++.
T Consensus 159 g~L~~~-----~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 159 GYAQEE-----YSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHhh-----hChHHHHHHHHHHHHHHHHHHHH
Confidence 999888 79999999887766666555544
No 129
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.42 E-value=5.4e-12 Score=131.29 Aligned_cols=182 Identities=13% Similarity=0.074 Sum_probs=137.0
Q ss_pred HHhhcCH-HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-Hhhhcccch
Q psy14136 281 VSILTSP-PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSL 358 (534)
Q Consensus 281 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~ 358 (534)
.+.+++| .++..++..++..++++.+..+++.|+++.+|++..+++.+............+++|+++|| +|||+.+
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~-- 91 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI-- 91 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH--
Confidence 3455666 48888888899999999999999999998899999888887777666666666789999999 5998763
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHHhhh
Q psy14136 359 TNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHMTAS 435 (534)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~~g~ 435 (534)
.++.++..++..++.+.........+...+.+.+.+...+.......+.+|++ +..+.++.++..++|.
T Consensus 92 --------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~ 163 (500)
T PRK09584 92 --------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS 163 (500)
T ss_pred --------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH
Confidence 45555555555555554323344444455566667777777778888887643 4567888899999999
Q ss_pred hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 436 FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 436 ~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.++|.+.|++.+. .+|+..|++.++..+++.+.++..
T Consensus 164 ~~gp~i~g~l~~~-----~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 164 FFSMLATPWLAAK-----YGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHHHHHHHHHh-----hCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988 799999999887666665554443
No 130
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.41 E-value=4.7e-12 Score=130.98 Aligned_cols=177 Identities=14% Similarity=0.081 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRK 363 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~ 363 (534)
+.++.+.+..++..+++++...++|.|+++. +|++..+++.+.+...++..++.+++|+++|| +|||+.+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l------- 82 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM------- 82 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-------
Confidence 4566777777888899999999999999887 89999999999999999999999999999999 7998763
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC----chhHHHHHHhHHHHhhhhHHh
Q psy14136 364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN----FAGPILAFAQTIHMTASFLSP 439 (534)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~g~~~g~~~~~~~~g~~i~~ 439 (534)
.++.++.+++..++...+ +.+...+...+.+.+.+...+.......+..|+ +|+++.++.+...++|..+||
T Consensus 83 ---~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 83 ---VLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred ---HHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 566666666666666554 444455555566666777777777888777753 288899999999999999999
Q ss_pred HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+.+++.+. .+|+..|++.++.++++.+.++..++
T Consensus 159 ~l~g~l~~~-----~g~~~~f~~~~~~~~~~~l~~~~~~~ 193 (475)
T TIGR00924 159 LLAGVIAEN-----YGYHVGFNLAAVGMVIGLLTFFAGRH 193 (475)
T ss_pred HHHHHHHHh-----cChHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999988 78999999988766666555444443
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.41 E-value=1.2e-12 Score=133.45 Aligned_cols=147 Identities=18% Similarity=0.193 Sum_probs=126.1
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcchhhh
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV--LHYGALIALRSIQGIASGLTWPA 178 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~--~~~~~l~~~r~l~G~g~g~~~~~ 178 (534)
+..+.+.+.++..++..++.++.|+++||+|||+++..+.++.+++..+...... .+++.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3467799999999999999999999999999999999999998888766544211 13466778899999999988999
Q ss_pred HHHHHhcccCCCcchhhhhhh--hhhhhHHHhhhhHHHHhhhh------cCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 179 MYALVGHWIPSNERSRFMSSF--QGFSFGIGLTYPLCGFLIAH------YGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 179 ~~~~i~~~~~~~~r~~~~~~~--~~~~~G~~~g~~l~~~l~~~------~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
...++.|++|+++|+++.++. ...++|.++||+++|++.++ +||+.+|++.+++.++..++.+++.+|+
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999955 35789999999999999987 4699999999988888888888888765
No 132
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.38 E-value=8.5e-12 Score=124.15 Aligned_cols=165 Identities=25% Similarity=0.311 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy14136 294 ITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIP 373 (534)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~ 373 (534)
+..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|+++||+|||+.+ .++.++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~ 72 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL----------IIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE----------eehhhhh
Confidence 445555666666667777566666899999999999999999999999999999999998753 4555555
Q ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcccccccC
Q psy14136 374 ALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN-FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETS 452 (534)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 452 (534)
+++.+...+.+ +.+..++..++.+.+.+...+....++.+..|+ +|++++++.+....+|..++|.+.+.+.+.
T Consensus 73 ~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---- 147 (352)
T PF07690_consen 73 ALGSLLLAFAS-NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY---- 147 (352)
T ss_dssp HHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----
T ss_pred hhHHHHhhhhh-hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc----
Confidence 55533333334 555777777888888888889999999999987 599999999999999999999999999987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q psy14136 453 LESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 453 ~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
.+|+..|++.+++.++..++.
T Consensus 148 -~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 148 -FGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp -CHHCCHHHHHHHHHHHHHHHH
T ss_pred -cccccccccccchhhhhhhhH
Confidence 789999999998888877643
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.37 E-value=4.9e-12 Score=127.80 Aligned_cols=156 Identities=17% Similarity=0.207 Sum_probs=125.7
Q ss_pred HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG 384 (534)
Q Consensus 305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (534)
.+....|. +++.+|.+..+.+++.+...++..++.++.|++.||+|||+.+ ..+.++..+......+.+
T Consensus 12 ~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 12 NLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL----------AVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred hhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee----------HHHHHHHHHHHHHHHHHc
Confidence 33444455 5555899999999999999999999999999999999999875 445555555555555555
Q ss_pred CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136 385 CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA 463 (534)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~ 463 (534)
+.+...+..++.+++.+...+....++.|..|++ |++++++.+....+|..++|.+.+.+.+. .+|+..|++.
T Consensus 81 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~ 154 (399)
T TIGR00893 81 -AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWAFIIE 154 (399)
T ss_pred -CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHHHHHH
Confidence 6777777777888888888888888999999865 99999999999999999999999998888 7899999988
Q ss_pred HHHHHHHHHHHHhh
Q psy14136 464 GAVGSCTYFFYQVL 477 (534)
Q Consensus 464 ~~~~~~~~~~~~~~ 477 (534)
+++.++..+..++.
T Consensus 155 ~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 155 GVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHHHHhhhe
Confidence 87776665555444
No 134
>KOG3762|consensus
Probab=99.37 E-value=2.1e-11 Score=120.26 Aligned_cols=182 Identities=14% Similarity=0.055 Sum_probs=145.6
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy14136 282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNI 361 (534)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~ 361 (534)
+++.++...++.+......++...+.+++=-++++ .+..+...|......-.+.++.-++.+++.+|+|+-+++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 45667776666666666666666666666556776 676667778777777888999999999999999998875
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHHh
Q psy14136 362 RKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLSP 439 (534)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~~ 439 (534)
.+++.+..+-++.+.+.. ++|..+..-++-+...+..+....+++....|++ +.++.|+..... .+|-.+|.
T Consensus 440 -----~lgLa~~~~Rf~~~S~L~-n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 440 -----YLGLACNVGRFLYYSYLQ-NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred -----eehhhHHHHHHHHHHHhc-CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 566667777777777777 8888888889999999999999999999999988 999999998775 57889999
Q ss_pred HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
+++|.+.+. .+-+..|...++.+++.++....+.+.
T Consensus 514 lIGG~~v~~-----fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 514 LIGGFVVER-----FGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hhhhhhhee-----ehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999998 788888888888777776666655443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.36 E-value=2.5e-12 Score=131.58 Aligned_cols=148 Identities=12% Similarity=0.100 Sum_probs=127.1
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhh
Q psy14136 98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWP 177 (534)
Q Consensus 98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~ 177 (534)
.+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++ ++.+.+++.+++.|++.+...+
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence 35667789999999999999999999999999999999999999988887775554 5788888999999999888888
Q ss_pred hHHHHHhcccCCCcchhhhhh-h-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 178 AMYALVGHWIPSNERSRFMSS-F-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 178 ~~~~~i~~~~~~~~r~~~~~~-~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
....++.+.+|++.|+...+. + ....+|.++++++.|++.+.+|||..|++.+++.++..++.++..+++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 888999999999999887663 3 567899999999999999999999999998888877766666665543
No 136
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.36 E-value=2.1e-11 Score=123.66 Aligned_cols=168 Identities=10% Similarity=0.068 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
+.+....++...+.+.+..++|.|+++.+|++..+.|+..+...+...+..++.|+++||+++|+.+ ..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l----------~~~ 82 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI----------VTG 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH----------HHH
Confidence 4555677777788888888999999888999999999999999999999999999999999998763 455
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
..+.++..+.....+ +.+...+..++.+++.+...+...+.+.+..|++ |+++.|+.+....+|..+||.+.|.+. .
T Consensus 83 ~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~ 160 (400)
T PRK11646 83 MLMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q 160 (400)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 666666666665554 6666666666666666666677777788887755 999999999999999999999999998 5
Q ss_pred cccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 449 DETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 449 ~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
.+|+..|++.+.+.++..++.
T Consensus 161 -----~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 161 -----YDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHH
Confidence 689999998877766655443
No 137
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.35 E-value=5.3e-12 Score=126.90 Aligned_cols=164 Identities=17% Similarity=0.215 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136 297 FGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL 376 (534)
Q Consensus 297 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~ 376 (534)
++.......+....|.+ ++.+|.+..+.+++.+...++..++.++.|+++||+|||+.+ .++.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~ 73 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYL-VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL----------PIGLILCAIV 73 (379)
T ss_pred hHHHHhHHhhhhhhHHH-HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh----------HHHHHHHHHH
Confidence 34444555555666654 455899999999999999999999999999999999999874 4555566666
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHh-HhhhhcccccccChh
Q psy14136 377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSP-MVAGYFLQDDETSLE 454 (534)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~-~~~g~l~~~~~~~~~ 454 (534)
.++..+.+ +.+..++..++.+++.+...+....++.+..|++ |+++.++.+....+|..++| .+.+.+.+. .
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~ 147 (379)
T TIGR00881 74 NLFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----Y 147 (379)
T ss_pred HHHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----C
Confidence 66666655 6666677777777777888888888999988865 99999999999999999999 455556566 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 455 SWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 455 ~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+|+..|++.+++.++..+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHhee
Confidence 89999888887766655544443
No 138
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.35 E-value=9.1e-12 Score=127.27 Aligned_cols=184 Identities=13% Similarity=0.025 Sum_probs=136.3
Q ss_pred cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccch
Q psy14136 279 PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSL 358 (534)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~ 358 (534)
+++.+.++|.++...+..++..+........+|.+.++ .+.++.+.+++.+...++..++.++.|+++||++||+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~- 86 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL- 86 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE-
Confidence 44556677888887777777777777778888888877 6779999999999999999999999999999999998762
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH---hh-cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh
Q psy14136 359 TNIRKVFTAISQVIPALLVMLI---GY-LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT 433 (534)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~ 433 (534)
.+..+.++..... .+ ...+.+...+..++.+++.+...+.....+.+..|++ |+++.++.+....+
T Consensus 87 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (417)
T PRK10489 87 ---------LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL 157 (417)
T ss_pred ---------ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH
Confidence 2222222222211 11 1224445555555556666666666677777877765 99999999999999
Q ss_pred hhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 434 ASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 434 g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
|..+||.+.|.+.+. .+|++.+++.++..+++.++.+.++
T Consensus 158 g~~~g~~l~g~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 158 GSVISPALGGLLIAA-----GGVAWNYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred HHHhHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999988 7888888887777666655554443
No 139
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=3.1e-11 Score=125.48 Aligned_cols=174 Identities=20% Similarity=0.184 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.+|.+.+..++.......+..++|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~---------- 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF---------- 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH----------
Confidence 467778888888888888888899999887 899999999999888899999999999999999998763
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
..+..+.+++.+...+.+ +.+..++..++.+++.+...+.....+.+..|++ |+++.|+.+....+|..++|.+.|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344444444444444444 6666667777777777777777788888888866 99999999999999999999999999
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+. .+|+..|++...+..++.+.....
T Consensus 158 ~~~-----~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 158 VEY-----ASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred Hhh-----ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 998 789999998877766665555443
No 140
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.34 E-value=3.1e-11 Score=124.96 Aligned_cols=177 Identities=14% Similarity=0.051 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVF 365 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~ 365 (534)
|.++.+++..+...+++++...+++.|+++.+|++..+++++.........+..+++|+++|| +|||+.+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~--------- 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI--------- 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH---------
Confidence 567777788888899999999999999999899999999888888888888888999999999 9999874
Q ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
.++.++..++.+...+........++...+.+.+.+...+...+.+.|.+|++ |+.++++.....++|..++|.+.
T Consensus 85 -~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 85 -VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred -HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 55666666655555554322333334555666777777788888888988644 47789999999999999999999
Q ss_pred hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
|++.+. .||+..|++.++..+++.+.+...+
T Consensus 164 g~l~~~-----~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 164 PVIADK-----FGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHh-----hChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999998 7899999987665555554444443
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=2e-11 Score=122.09 Aligned_cols=170 Identities=14% Similarity=0.063 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q psy14136 292 IGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371 (534)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 371 (534)
+.+..++...........+|.|..+ .+.+..+.+++.+...++..++.++.|+++||+|||+.+ ..+.+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~----------~~~~~ 72 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM----------IGADL 72 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH----------HHHHH
Confidence 4455566666666677778888887 789999999999999999999999999999999998764 33333
Q ss_pred HHHHHHHHHhhcC----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 372 IPALLVMLIGYLG----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 372 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
+..+......... .+.+...+..++.+++.+...+....++.|..|++ |+++.|+.+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333222221 14556666677777777888888888999998866 999999999999999999999999998
Q ss_pred cccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+. .+|+..|++.++..+++.+..+..
T Consensus 153 ~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 153 AT-----LGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HH-----hhHHHHHHHHHHHHHHHHHHHHhc
Confidence 88 789999988877666655544443
No 142
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=2.8e-11 Score=122.11 Aligned_cols=170 Identities=18% Similarity=0.174 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ 370 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 370 (534)
......+.............|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+ ..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~ 77 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL----------LLGL 77 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHH
Confidence 33333444444555555666766555 899999999999999999999999999999999998763 4555
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136 371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD 449 (534)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 449 (534)
++..+........+ +.+...+..++.+++.+...+....++.|..|++ |+++.|+.+....+|..++|.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~- 155 (385)
T TIGR00710 78 FIFALSSLGLALSN-NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW- 155 (385)
T ss_pred HHHHHHHHHHHHHc-cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 55555555555554 6666666667777777777777888888988866 99999999999999999999999999888
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 450 ETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+|+..+++.+++.++..+.....
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 156 ----LSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999988887766665554443
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.32 E-value=4.2e-12 Score=132.90 Aligned_cols=141 Identities=14% Similarity=0.137 Sum_probs=110.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.++.......+.+.+.+..++.++....
T Consensus 303 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (496)
T PRK03893 303 KTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQG 382 (496)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcc
Confidence 34789999999999999999999999999999999999999988877766665443222223444454555555544444
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHH
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAI 235 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li 235 (534)
..+...+++.|.+|+++|++.++ .+....+|..+||.+++.+.+.+||+..+++.+....+
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 383 ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 56677789999999999999999 45778899999999999999999999888666544433
No 144
>PRK03699 putative transporter; Provisional
Probab=99.31 E-value=1.5e-10 Score=117.41 Aligned_cols=172 Identities=13% Similarity=0.127 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.++...+..++.......+...+|.+.++ +|+|..+.+++.+...++..++.++.|++.||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~---------- 75 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL---------- 75 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----------
Confidence 345555556666655566666777887665 899999999999999999999999999999999999763
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
..+.++..+......+.+ +.+...+..++.+.+.+...+.....+.+..|++ |+.+.+..+....+++.++|.+.+.+
T Consensus 76 ~~~~~~~~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 76 IFGFALMILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555554 5666666666777777777777777888888865 99999999888889999999998887
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
.+. . .+|+..|.+.+++.++..++.
T Consensus 155 ~~~--~--~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 155 LAR--S--IEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred Hhc--c--ccHHHHHHHHHHHHHHHHHHH
Confidence 654 1 689999998887766554443
No 145
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=1.1e-11 Score=125.98 Aligned_cols=142 Identities=20% Similarity=0.297 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136 104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183 (534)
Q Consensus 104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 183 (534)
+.++..+.+.++..++.++.|++.||+|||+.+..+.++.+++.++..+ .++.+.+++.+++.|++.+...+.....+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 327 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL--APSPWMALIGAALTGFGFSLVFPALGVEA 327 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4567778889999999999999999999999999988888887766444 35777788899999999998888888888
Q ss_pred hcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 184 GHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 184 ~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
.|.+|+++|+++.+++ ....+|..+++++.+.+.++.||+..|++.+++.++..++.+++.+++
T Consensus 328 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 328 VKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999955 678899999999999999999999999998888887766666554433
No 146
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.31 E-value=7.7e-12 Score=129.65 Aligned_cols=148 Identities=9% Similarity=-0.051 Sum_probs=112.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|+|..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++..+..+...++...+.+.+++.|++...
T Consensus 286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 365 (467)
T PRK09556 286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFG 365 (467)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Confidence 34789999999999999999999999999999999999998776655444433232233223566667788888865444
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhh-HHHhhhhHHHHhhh------------hcCCchhhhhhchhhHHHHHHh
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSF-GIGLTYPLCGFLIA------------HYGWRSVFYTTGSLGAIWCVAW 240 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~-G~~~g~~l~~~l~~------------~~gwr~~f~i~~~~~li~~i~~ 240 (534)
........+.|.+|+++|+++.|+. ...++ |..++|.+.|++.+ ..||+..|++.++..++..+..
T Consensus 366 ~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 366 PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 4444456777999999999999954 66665 77999999999998 5789999998877777665554
Q ss_pred hh
Q psy14136 241 WF 242 (534)
Q Consensus 241 ~~ 242 (534)
++
T Consensus 446 ~~ 447 (467)
T PRK09556 446 AI 447 (467)
T ss_pred HH
Confidence 43
No 147
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=5.7e-12 Score=127.65 Aligned_cols=168 Identities=17% Similarity=0.218 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q psy14136 295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA 374 (534)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 374 (534)
..+.............|.+.++ +|.+..+.+++.+...++.+++.++.|++.||++||+.+ ..+.++..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~ 93 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL----------LWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH----------HHHHHHHH
Confidence 3333334444555566666555 899999999999999999999999999999999998763 34445555
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccCh
Q psy14136 375 LLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSL 453 (534)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 453 (534)
++.......+ +.+...+..++.+++.+...+....++.|..|++ |++++++.+....+|..+++.+.+.+.+.
T Consensus 94 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 167 (398)
T TIGR00895 94 VFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV----- 167 (398)
T ss_pred HHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----
Confidence 5555555554 6666666667777777777888888899998865 99999999999999999999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HhhcC
Q psy14136 454 ESWRQVFLIAGAVGSCTYFFY-QVLGT 479 (534)
Q Consensus 454 ~~~~~~f~~~~~~~~~~~~~~-~~~~~ 479 (534)
.+|+..+++.+++.++..++. ..+++
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 789888888765554444443 33344
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.31 E-value=3.2e-11 Score=122.53 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
+....+..+...+.........|.+.+ .+|.+..+.+++.+...++..++.++.|++.||+|||+.+ .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~~ 82 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAG-EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM----------VT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence 445555555666666666666676554 5899999999999999999999999999999999998764 44
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+.++.++..+...+.+ +.+......++.+.+.+...+....++.|..|++ |+++.++.+....+|..+++.+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 83 SIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555 6666667777777777777787888888888755 9999999999999999999999998887
Q ss_pred ccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 448 DDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
. .+ .+|+..|++.++..++..+.....++
T Consensus 162 ~--~~-~~w~~~f~~~~~~~~~~~~~~~~~~~ 190 (405)
T TIGR00891 162 V--WG-DGWRALFFISILPIIFALWLRKNIPE 190 (405)
T ss_pred h--cC-ccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6 11 24999888766555554443333333
No 149
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=8.9e-11 Score=121.81 Aligned_cols=171 Identities=13% Similarity=0.060 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136 296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL 375 (534)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~ 375 (534)
.++.....+....+.|.+. +.+|++..+.+++.+...++..++.++.|+++||+|+|+.+ ..+.++.++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~----------~~~~~~~~~ 113 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS----------AFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHH
Confidence 3333333444444555554 45899999999998888899999999999999999998753 344455555
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc----ccc
Q psy14136 376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ----DDE 450 (534)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~ 450 (534)
..++..+.. +....++..++.+++.+... ....++.+.+|++ ||+++|+.+...++|..+++.+.+.+.. ...
T Consensus 114 ~~~~~~~~~-s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 114 AVFCMSLVS-SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHhc-CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 555555554 55555444455555544332 3344567888755 9999999998888888887776655432 100
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 451 TSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 451 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+..+|+..|++.+++.++..++.+++++
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11248999999988887766666555543
No 150
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.30 E-value=6.2e-11 Score=119.61 Aligned_cols=171 Identities=13% Similarity=0.113 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.++.+.+..++...........+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~---------- 71 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL---------- 71 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH----------
Confidence 456677777777777777888888887665 899999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
..+..+.++..+...+.+ +.+..++..++.+++.+...+.......+..|++ |++++++......++..++|.+.+.+
T Consensus 72 ~~~~~~~~~~~~l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 72 LFLVALCVIGNAMFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 456666666666666665 6777777777777777766666667777888765 99999999999999999999999998
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
.+. .+|+..|++.+++.++..+..
T Consensus 151 ~~~-----~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 151 SQE-----FSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred hhh-----ccHHHHHHHHHHHHHHHHHHH
Confidence 887 789999999887766555443
No 151
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.30 E-value=8.5e-11 Score=120.86 Aligned_cols=175 Identities=14% Similarity=0.201 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.++...+.....+.....+....| ++++ .|.++.+.++..+...++..++.++.|++.||++||+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~---------- 94 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL---------- 94 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh----------
Confidence 3444444444444444444455555 4555 599999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHhhcC---CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 367 AISQVIPALLVMLIGYLG---CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
..+.++.++..+.....+ .+.....+..++.+++.+...+.....+.+.+|++ |++++|+.+....+|+.+++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 344444444444443321 13333444455556666666666667777888755 99999999999999999998887
Q ss_pred hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+...+. . .+|+..|++.+++.++..+..+++
T Consensus 175 ~~~~~~--~--~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 175 LLGMAW--F--NDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHHH--h--hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 765543 1 589999999888777655544443
No 152
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.30 E-value=7.7e-11 Score=119.26 Aligned_cols=154 Identities=16% Similarity=0.191 Sum_probs=124.1
Q ss_pred HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381 (534)
Q Consensus 302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (534)
..+.....+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+ ..+.++.++..+...
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV----------ILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH----------HHHHHHHHHHHHHHH
Confidence 333444456776665 899999999999999999999999999999999999764 455555555555555
Q ss_pred hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136 382 YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVF 460 (534)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f 460 (534)
..+ +.+..++.-++.+++.+...+.....+.|..|++ |+++.++.....++|..++|.+.+.+.+. .+|+..|
T Consensus 104 ~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-----~gw~~~f 177 (394)
T PRK10213 104 FAN-SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-----IGWRNVF 177 (394)
T ss_pred HHC-hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHH
Confidence 554 6777777777778888887888888888988865 99999999999999999999999999988 7999999
Q ss_pred HHHHHHHHHHHH
Q psy14136 461 LIAGAVGSCTYF 472 (534)
Q Consensus 461 ~~~~~~~~~~~~ 472 (534)
++.+++.++..+
T Consensus 178 ~~~~~l~~~~~l 189 (394)
T PRK10213 178 NAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHH
Confidence 988766655443
No 153
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=1.3e-11 Score=122.60 Aligned_cols=143 Identities=24% Similarity=0.372 Sum_probs=129.8
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCee-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKT-VFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
.+|.++.+.+++.+...++..++.++.|++.||+|||+ .+..+.++..++.++..+. ++.+.+++..++.|++.+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~ 282 (352)
T cd06174 205 VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA--PSLALLLVALLLLGFGLGFA 282 (352)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHhcc
Confidence 45889999999999999999999999999999999999 9999999999988886544 56888999999999999999
Q ss_pred hhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhh
Q psy14136 176 WPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWW 241 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~ 241 (534)
.+...+++.|..|+++|++.+++. ....+|..+++.+.+.+.+..+|+..|++.+++.++..+..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 283 FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999954 788999999999999999989999999999888887666544
No 154
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=6.5e-11 Score=119.84 Aligned_cols=171 Identities=14% Similarity=0.081 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
++.+.+..+......+.....+|.+.++ +|.+..+.++..+...++..++.+..|++.||+|||+.+ ..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~ 79 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL----------IG 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH----------HH
Confidence 4444444444333333344456766554 999999999999999999999999999999999999764 45
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+..+..++.....+.+ +.+.+.+..++.+.+.+...+....++.+..|++ |++++|+......+|..++|.+.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 80 LFVLFIASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5556666666666655 6666666666666666666677777888887755 9999999999999999999999999888
Q ss_pred ccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 448 DDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
. .+|+..|++.+++.++..+....
T Consensus 159 ~-----~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 159 Y-----LGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred H-----hcHHHHHHHHHHHHHHHHHHHHH
Confidence 7 79999999988877666544433
No 155
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.29 E-value=3.1e-11 Score=121.25 Aligned_cols=159 Identities=14% Similarity=0.122 Sum_probs=121.6
Q ss_pred HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY 382 (534)
Q Consensus 303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (534)
.+......|.+.+ .+|.+..+.++..+...++..++.++.|++.||+|||+.+ .++..+.++......+
T Consensus 19 ~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~----------~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 19 VYTWTLLAPPLGR-YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA----------MLGGILYGLGFTFYAI 87 (377)
T ss_pred HhhhhhHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh----------HHhHHHHHHHHHHHHH
Confidence 4444555665554 5899999999999999999999999999999999999875 4555555555555555
Q ss_pred cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136 383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI 462 (534)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~ 462 (534)
.+ +.+...+...+.+++.+...+.......+.+|++|+++.++......+|..+++.+.+.+.+. .+|+..|++
T Consensus 88 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~f~~ 161 (377)
T TIGR00890 88 AD-SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL-----EGVPAAFIY 161 (377)
T ss_pred HH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----ccHHHHHHH
Confidence 55 566666666666666666666666667777888899999999999999988877777777777 789999999
Q ss_pred HHHHHHHHHHHHHhhc
Q psy14136 463 AGAVGSCTYFFYQVLG 478 (534)
Q Consensus 463 ~~~~~~~~~~~~~~~~ 478 (534)
.+++.++..+..+++.
T Consensus 162 ~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 162 MGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 8887777665554443
No 156
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=8.8e-11 Score=119.59 Aligned_cols=175 Identities=14% Similarity=0.075 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
+...+.+++...-...+....| .+++.+|++..+.+++.+...++..++.+..|++.||+|||+.+ ..+
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----------~~~ 79 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI----------AGI 79 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH----------HHH
Confidence 3444444444444444555555 56667999999999999999999999999999999999998763 455
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++.++......+.+ +...+++.-++.+++.+...+....++.|.+|++ |++++|+.+....+|..+++.+.+++.+.
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 80 MVLWGIASTATMFAT-GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 666666666666655 6666777777778888877777778889988865 99999999999999999999999887642
Q ss_pred cc-cChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 449 DE-TSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 449 ~~-~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.. .+..+|+..|++.++..++..++..+
T Consensus 159 ~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 159 DGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred CCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 00 01158999999987776655444433
No 157
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.28 E-value=6.1e-11 Score=123.71 Aligned_cols=171 Identities=20% Similarity=0.245 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
..+++..+.............|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+ .++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~ 73 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF----------LIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH----------HHH
Confidence 344555555556566666777877766 899999999999999999999999999999999998763 455
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++..++.+.....+ +....++..++.+++.+...+....++.|..|++ |+++.++......+|..++|.+.+++.+.
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 74 TFAFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 556666666666655 6777777777778888887888888899988855 99999999999999999999999999988
Q ss_pred cccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 449 DETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 449 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+|+..|++.+.+.++..++..+.
T Consensus 153 -----~~w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 153 -----YHWRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred -----cCceehhhhhhHHHHHHHHHHHHH
Confidence 789999998877766665554444
No 158
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=2.8e-11 Score=123.27 Aligned_cols=141 Identities=21% Similarity=0.155 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136 104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183 (534)
Q Consensus 104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i 183 (534)
..+.+.+++.++..++.++.|++.||+|||+.+..+.++..++.+...+. ++.+.+++.+++.|++.+...+...+++
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQLGILRFLLGAADGALLPAVQTLL 336 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHhhhHhhHHHHHHHH
Confidence 45677778888889999999999999999999999988877776664333 5778888899999999999999999999
Q ss_pred hcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 184 GHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 184 ~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
.+..|+++|++.++++ ....+|..+||.+++.+.+.+||+..|++.+++.++..+..++..++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 337 VYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999955 67889999999999999999999999999998888877766554433
No 159
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.28 E-value=7.5e-11 Score=118.23 Aligned_cols=171 Identities=16% Similarity=0.170 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 367 (534)
.+|..++..+........+..+.|.++++.+|++..+.+++.+...++..++.++.|++.||+|||+.+ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~ 71 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT----------T 71 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH----------H
Confidence 356667777777777788888899878778999999999999999999999999999999999998763 4
Q ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
++.++..+..+...+.+.+.+...+..++.+.+.+ .......++.+..|++ |+++.++.....++|..+++.+.+.+.
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55555555555555543134444444454454433 3344566777877755 999999999888888888777776655
Q ss_pred ccc-----ccChhhHHHHH-HHHHHHHHH
Q psy14136 447 QDD-----ETSLESWRQVF-LIAGAVGSC 469 (534)
Q Consensus 447 ~~~-----~~~~~~~~~~f-~~~~~~~~~ 469 (534)
... .....+|+..| +..+++..+
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHH
Confidence 420 00114788888 333444333
No 160
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.27 E-value=1.5e-11 Score=127.66 Aligned_cols=152 Identities=15% Similarity=0.091 Sum_probs=118.4
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHH
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA---AVL------HYGALIALRSI 167 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~~~------~~~~l~~~r~l 167 (534)
++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++. ..+ +...+....++
T Consensus 313 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (481)
T TIGR00879 313 NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLF 392 (481)
T ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH
Confidence 668888888999999999999999999999999999999999988888877665421 111 22223333333
Q ss_pred HhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 168 QGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
.+.......+....++.|.+|+++|+++++ ......+|.++++.+.+.+.++.+|++.|++.++++++..++.+++.||
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 393 IAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 333323345677788899999999999999 5578899999999999999998999999999998888887777766666
Q ss_pred CC
Q psy14136 247 AP 248 (534)
Q Consensus 247 ~p 248 (534)
++
T Consensus 473 ~~ 474 (481)
T TIGR00879 473 TK 474 (481)
T ss_pred CC
Confidence 43
No 161
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.27 E-value=3.4e-09 Score=104.12 Aligned_cols=331 Identities=13% Similarity=0.080 Sum_probs=212.2
Q ss_pred cccCChhhHH-HHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQG-AILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
+.|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+..++.-+. ++...+-+..++.|++.+ .
T Consensus 34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q~~yg~~~a-~ 110 (412)
T PF01770_consen 34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQFFYGLATA-A 110 (412)
T ss_pred ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHHHHHHHHHH-H
Confidence 4688887764 45556666777788899999999999999999999988887774344 799999999999999977 4
Q ss_pred hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHHHHHHhhhhccCCCCCC-
Q psy14136 176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH- 251 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~- 251 (534)
..+-++++-...|+++-.++.+ .-++.-+|..++..+|-.+... .+.+...++......+.. ++.+++|..++..
T Consensus 111 evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fLP~~~~S~~ 189 (412)
T PF01770_consen 111 EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFLPMPKRSLF 189 (412)
T ss_pred HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHcCCCCcccc
Confidence 7888999999999999888888 4477778888888888777653 334445555443333333 3334556544321
Q ss_pred --cccch------hhhhhhhhccCc---cccCC----CCC-------cccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhc
Q psy14136 252 --PRITR------KELDYIQENIEP---TIVGS----KGL-------KVPWVSILTSPPAWAIGITTFGRIWVHYIFIIP 309 (534)
Q Consensus 252 --~~~~~------~~~~~~~~~~~~---~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (534)
+.... .+.+...+..+. .++.+ ... ...+++..++|.++...+-+.+...+++.+.+|
T Consensus 190 f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nY 269 (412)
T PF01770_consen 190 FHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINY 269 (412)
T ss_pred eeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHH
Confidence 10000 000100000000 00000 011 112344556788877777777777777777777
Q ss_pred hhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q psy14136 310 GPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNV 387 (534)
Q Consensus 310 ~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (534)
......+. .+-...-.|.+-....+.+.++.+..|++..++.+.. ...+....++.+.+++++.+.+ +.
T Consensus 270 vQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~lm~~t~-~I 340 (412)
T PF01770_consen 270 VQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFLMSFTG-NI 340 (412)
T ss_pred HHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHHHHHhh-HH
Confidence 66666653 1233344677777888888888888888854444432 2233455556666677777766 77
Q ss_pred hHHHHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136 388 ALVLITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~ 440 (534)
+......++.........+....-++. +..+.-|..+|+.+++..+-..+-..
T Consensus 341 wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~ 394 (412)
T PF01770_consen 341 WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL 394 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence 777777777766666555555444444 33344888888877776555554443
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1.6e-10 Score=112.82 Aligned_cols=174 Identities=20% Similarity=0.148 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
..++.+.+..|+.....+...-.+|+..++ +|.+...+|++.+.+..+..++.++...+.||+.||+.+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL---------- 81 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL---------- 81 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH----------
Confidence 456778888888888999999999999988 899999999999999999999999999999999999874
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
...+.+..++-++..+.+ +...+.+.=++.++..|..++.......++.|++ |++++++..+...++..+|..++.++
T Consensus 82 l~~l~lFi~~n~l~alAp-~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i 160 (394)
T COG2814 82 LGLLALFIVSNLLSALAP-SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL 160 (394)
T ss_pred HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence 455566666666666666 8888999999999999999999999999988765 99999999999999999999999999
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
-|. .||+..|+..+.+.++..+..+..
T Consensus 161 g~~-----~GWR~~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 161 GQL-----FGWRATFLAIAVLALLALLLLWKL 187 (394)
T ss_pred HHH-----hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 999999999999888877765544
No 163
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.27 E-value=7.5e-11 Score=118.62 Aligned_cols=169 Identities=12% Similarity=0.042 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136 293 GITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI 372 (534)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 372 (534)
.+..++...+.......+|.|+++.+|.+..+.+++.+...+...+..++.|+++||+|||+.+ ...+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---------~~~~~~~ 73 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL---------ILFCCLL 73 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH---------HHHHHHH
Confidence 3455666677777788889999887999999999999999999999999999999999988753 2233333
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHH--HHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136 373 PALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPI--LAFAQTIHMTASFLSPMVAGYFLQDD 449 (534)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~--~g~~~~~~~~g~~i~~~~~g~l~~~~ 449 (534)
..+........+ +.+..++...+.+.+.+...+.......+..|++ |+.+ .+.......+|..++|.+.+.+.+.
T Consensus 74 ~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~- 151 (375)
T TIGR00899 74 AALACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG- 151 (375)
T ss_pred HHHHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-
Confidence 334444444444 4444444333344444445555556666666644 5543 6777888889999999999999888
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 450 ETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.+|+..|++.+.+.++..+..++
T Consensus 152 ----~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 152 ----FGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHH
Confidence 78999999988877666655544
No 164
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=1.5e-10 Score=117.94 Aligned_cols=169 Identities=13% Similarity=0.106 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ 370 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 370 (534)
...+..++............|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+.+ ..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~ 87 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL----------IVSV 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHHH
Confidence 33344444444455555666766665 899999999999999999999999999999999999874 3444
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136 371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD 449 (534)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 449 (534)
.+..+..+...+.+ +.+...+..++.+.+.+...+.....+.|..|++ |++++++.+....+|..+++.+.+.+.+.
T Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 165 (406)
T PRK11551 88 ALFGLFSLATAQAW-DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD- 165 (406)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-
Confidence 44444444444544 6666667777777777777777888888988755 99999999999999999999998888777
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 450 ETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.+|+..|++.+++.++..++...
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 166 ----AAWRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999998877665555444333
No 165
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.26 E-value=1.7e-10 Score=116.82 Aligned_cols=171 Identities=13% Similarity=0.100 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
....+..+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+ ..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l----------~~~ 74 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA----------IPG 74 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH----------HHH
Confidence 334444445555555666778877766 899999999999999999999999999999999998763 455
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++..+........+ +.+...+..++.+.+.+...+.....+.+..|++ |+++.++.+....++..++|.+.+.+.+.
T Consensus 75 ~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 75 AALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555555555555544 5555555555666666666667777888888755 99999999999999999999999888777
Q ss_pred cccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 449 DETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 449 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+|+..|++.+++.++..++.+..
T Consensus 154 -----~g~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 154 -----FPWQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred -----cChHHHHHHHHHHHHHHHHHHHHH
Confidence 789999988887766665554333
No 166
>PRK11043 putative transporter; Provisional
Probab=99.25 E-value=1.6e-10 Score=117.40 Aligned_cols=161 Identities=16% Similarity=0.124 Sum_probs=118.3
Q ss_pred HHHHHHhchhhh--hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q psy14136 302 VHYIFIIPGPRY--MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML 379 (534)
Q Consensus 302 ~~~~~~~~~~~~--l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 379 (534)
.+.....+.|.+ +++.+|.+..+.+++.+...++..++.++.|+++||++||+.+ ..+..+..+..+.
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~ 87 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL----------LAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH----------HHHHHHHHHHHHH
Confidence 333444444443 4455899999999999999999999999999999999998763 4444455555555
Q ss_pred HhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHH
Q psy14136 380 IGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQ 458 (534)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 458 (534)
..+.+ +.+...+..++.+.+.+...+.......+..|++ +++..+..+....++..++|.+.+.+.+. .+|+.
T Consensus 88 ~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~~~ 161 (401)
T PRK11043 88 MLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-----FGWQA 161 (401)
T ss_pred HHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CChHH
Confidence 55554 5555555555555555555555556677877766 88888988888899999999999999988 78999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q psy14136 459 VFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 459 ~f~~~~~~~~~~~~~~~~~~ 478 (534)
.|++.+++.++..+..+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 162 IFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99988877776665554443
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.25 E-value=2.6e-10 Score=119.04 Aligned_cols=172 Identities=13% Similarity=0.092 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
+..+++..+....-...+..-+|.+..+ +|.+..+.+++.+.+.++.....+..|+++||+|||+.+ .+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l----------~~ 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL----------ML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence 3445555566666666677778888776 899999999999999999999999999999999999864 55
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhcc-CC-CchhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDI-GP-NFAGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
+..+..++.+.....+ +.+..++.-.+.+.+.+...+.....+.+. .| ++|++++|+......+|..+||.+.|.+.
T Consensus 77 ~~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 77 GGTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666666666666665 677777776777777777666665555454 35 44999999999999999999999999999
Q ss_pred cccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+. .+|++.|++...+.++.+++..+.
T Consensus 156 ~~-----~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 156 EH-----FYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred cc-----CChHHHHHHHHHHHHHHHHHHHHh
Confidence 98 899999999877766665554444
No 168
>PRK12382 putative transporter; Provisional
Probab=99.25 E-value=1.4e-10 Score=117.53 Aligned_cols=166 Identities=15% Similarity=0.117 Sum_probs=119.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136 286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF 365 (534)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 365 (534)
++.++.+.+..+............+|.++++.+|.|..+.+++.+...+...+++++.|+++||+|||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l--------- 84 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA--------- 84 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH---------
Confidence 34556666666666666667777888888877999999999999999999999999999999999999864
Q ss_pred HHHHHHHHHHHH---HHHhhcC----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhH
Q psy14136 366 TAISQVIPALLV---MLIGYLG----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFL 437 (534)
Q Consensus 366 ~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i 437 (534)
..+.+...+.. ....... .+.+.+++.-++.+.+.+...+....+..+..|++ |++++|+......+|..+
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~ 163 (392)
T PRK12382 85 -LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA 163 (392)
T ss_pred -HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH
Confidence 33333222221 1111111 13344555555666666666666666777777655 999999999988999999
Q ss_pred HhHhhhhcccccccChhhHHHHHHHHHHH
Q psy14136 438 SPMVAGYFLQDDETSLESWRQVFLIAGAV 466 (534)
Q Consensus 438 ~~~~~g~l~~~~~~~~~~~~~~f~~~~~~ 466 (534)
+|.+.+.+.+. .+|+..+.+..++
T Consensus 164 g~~~~~~l~~~-----~g~~~~~~~~~~~ 187 (392)
T PRK12382 164 GAPLGLLLHSH-----FGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHHhc-----cChHHHHHHHHHH
Confidence 99999998887 7888766654443
No 169
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.24 E-value=2.2e-10 Score=122.77 Aligned_cols=165 Identities=13% Similarity=0.121 Sum_probs=123.7
Q ss_pred HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC 385 (534)
Q Consensus 306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (534)
+...+|.+.. .+|.+..+.+++.+...++.+++.++.|+++||+|||+.+ ++++++.+++.++..+.+
T Consensus 186 is~ilp~i~~-~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l----------ii~lil~~i~~ll~afa~- 253 (742)
T TIGR01299 186 VGFVLPSAEK-DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL----------LICLSVNGFFAFFSSFVQ- 253 (742)
T ss_pred HHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHHh-
Confidence 3344554444 4899999999999999999999999999999999999764 344445555555555554
Q ss_pred chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc--------cChhhH
Q psy14136 386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE--------TSLESW 456 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~--------~~~~~~ 456 (534)
+.+.+++.-++.+++.+...+....++.|..|++ ||...++.++...+|.++++.+...+....+ ....+|
T Consensus 254 s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW 333 (742)
T TIGR01299 254 GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW 333 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence 6667777778888888888889999999999866 9999999999999999998877655443200 011478
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 457 RQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 457 ~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
+..+++.++..++.+++.+++++..+
T Consensus 334 R~l~~i~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 334 RVFVIVCAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99888887777766666666666543
No 170
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=3.6e-10 Score=114.48 Aligned_cols=175 Identities=11% Similarity=0.003 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q psy14136 286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSYLSSVLFCYLADQLFVRNIMSLTNIRKV 364 (534)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~ 364 (534)
|.+.+...+..++.......+...+|.|+++.+|.+..+.|++.+...+ ..+.+.+..++ .||+|+|+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~-------- 84 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL-------- 84 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH--------
Confidence 5566777777888888888888899999988899999999998766655 44455555555 9999998753
Q ss_pred HHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-h--hHHHHHHhHHHHhhhhHHhHh
Q psy14136 365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-A--GPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~--g~~~g~~~~~~~~g~~i~~~~ 441 (534)
+..+.++.++......+.+ +.+.+.+...+.+.......+....+..+..+++ | +...++.+....+|..++|.+
T Consensus 85 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i 162 (393)
T PRK15011 85 -IVFCCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL 162 (393)
T ss_pred -HHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence 2233333333333444443 4443333322233333344444455555544432 3 344578888889999999999
Q ss_pred hhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 442 AGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 442 ~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
.+.+.+. .||+..|++.++..++..+....
T Consensus 163 ~~~l~~~-----~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 163 AYALAMG-----FSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHh-----cChHHHHHHHHHHHHHHHHHHHh
Confidence 9999988 79999999988776666555443
No 171
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.23 E-value=2e-10 Score=117.77 Aligned_cols=161 Identities=18% Similarity=0.191 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
+....+..+.............|.+ ++.+|.++.+.++..+...++..++.++.|++.||+|||+.+ .+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l----------~~ 88 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM----------MW 88 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HH
Confidence 4444444444444444444455544 445899999999999999999999999999999999998764 45
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+.++.+++.....+.+ +.+...+.-++.+++.+...+....++.|..|++ |+++.++......+|..+++.+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 89 SIVAYSVGTGLSGLAS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 5555556555555555 6666677777777777777777888888988866 9999999999999999999999998888
Q ss_pred ccccChhhHHHHHHHHHHH
Q psy14136 448 DDETSLESWRQVFLIAGAV 466 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~ 466 (534)
. .+|+..|++....
T Consensus 168 ~-----~~w~~~f~i~~~~ 181 (426)
T PRK12307 168 A-----YGWRAAFFVGLLP 181 (426)
T ss_pred c-----CCHHHHHHHHHHH
Confidence 7 7899999875443
No 172
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.22 E-value=1.9e-10 Score=116.63 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=120.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136 286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF 365 (534)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 365 (534)
+|.+|.+....++.+.+...+..++|.|+++.+|+++.+.+.+.+...++..++.++.|+++||+|||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~--------- 71 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL--------- 71 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---------
Confidence 57889999999999999999999999999988999999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHH---HHHHhhcCC---chh-HHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHH
Q psy14136 366 TAISQVIPALL---VMLIGYLGC---NVA-LVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLS 438 (534)
Q Consensus 366 ~~~~~~~~~~~---~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~ 438 (534)
..+....++. ...+...+. ... ...+..++.+.+.+...+....+..+..+ +++...|.......+|..++
T Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 72 -LWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred -HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHH
Confidence 1111111111 111111110 011 11222233334444444444444444322 24556778888889999999
Q ss_pred hHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 439 PMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 439 ~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
|.+.|.+.+. +|+..|++.+++.++..++.+..
T Consensus 150 ~~~~g~l~~~------~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 150 ASIAGILFSI------DPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred HHHHhhhhcc------CchHHHHHHHHHHHHHHHHHHHh
Confidence 9999877654 78889988887777666554443
No 173
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.22 E-value=3.4e-10 Score=114.62 Aligned_cols=152 Identities=16% Similarity=0.102 Sum_probs=123.3
Q ss_pred HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL 383 (534)
Q Consensus 304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (534)
..+...+|.+.++ +|+|..+.++..+...++..++.+..|++.||+|||+.+ ..+..+.+++.+...+.
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l----------~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV----------AISLLLIAVGALMRELY 94 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHC
Confidence 3445566766655 899999999999999999999999999999999999874 67778888888888877
Q ss_pred CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136 384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA 463 (534)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~ 463 (534)
+ +.+..++.-++.+++.+...+.....+.+.+|++|+.++|+......+|..+++.+.+.+.+. . .+|+..+.+.
T Consensus 95 ~-~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~--~--~~w~~~~~~~ 169 (393)
T PRK09705 95 P-QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH--S--ETWYQTLAWW 169 (393)
T ss_pred c-chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh--c--CCHHHHHHHH
Confidence 7 666777777788888887777777778888887799999999999999999999999988876 1 3788887665
Q ss_pred HHHHHHHH
Q psy14136 464 GAVGSCTY 471 (534)
Q Consensus 464 ~~~~~~~~ 471 (534)
++..++..
T Consensus 170 ~~~~~~~~ 177 (393)
T PRK09705 170 ALPAVVAL 177 (393)
T ss_pred HHHHHHHH
Confidence 55544433
No 174
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.21 E-value=5.4e-10 Score=115.37 Aligned_cols=154 Identities=13% Similarity=0.199 Sum_probs=107.5
Q ss_pred HhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy14136 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-- 384 (534)
Q Consensus 307 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 384 (534)
....| ++.+. |++..+.++..+...++..++.++.|+++||+|+|+.+ .++.++.++..+...+..
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l----------~~~~~~~~i~~~~~~~~~~~ 116 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWA 116 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH----------HHHHHHHHHHHHHHHhhhcc
Confidence 34455 45665 99999999999999999999999999999999999864 455555555554444432
Q ss_pred -CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhH-HhHhhhhcccccccChhhHHHHHH
Q psy14136 385 -CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFL-SPMVAGYFLQDDETSLESWRQVFL 461 (534)
Q Consensus 385 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~~~~~~~~~~~f~ 461 (534)
.+.+..++..++.+++.+...+.......+.+|++ |++++|+.+....+|+.+ +|.+...+... .+|+..|+
T Consensus 117 ~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~gw~~~f~ 191 (452)
T PRK11273 117 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----NDWHAALY 191 (452)
T ss_pred cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----ccHHHHHH
Confidence 23444555555666666666666666677777755 999999999998888754 55443333333 58999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy14136 462 IAGAVGSCTYFFYQVL 477 (534)
Q Consensus 462 ~~~~~~~~~~~~~~~~ 477 (534)
+.+++.++..++.+++
T Consensus 192 i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 192 MPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8877766654444333
No 175
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.21 E-value=2.5e-10 Score=115.49 Aligned_cols=171 Identities=13% Similarity=0.084 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
|.++.+++..++...+........+.+.++ ++.+..+.+++.+...+...+..++.|++.||++||+.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl---------- 71 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM---------- 71 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh----------
Confidence 456667777777766655555555656554 788888899999999999999999999999999999875
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
.++..+.++..+...... +. ++..++.+.+.+...|...+++.|..|++ |++++|+.+....++..+||.++|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGI-HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333322222 22 33445667778888888899999999866 99999999999999999999999999
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
.+. . |...+.+.+.+.+++.+....++
T Consensus 148 ~~~-----~-~~~~~~i~~~~~~~~~~~~~~l~ 174 (393)
T PRK11195 148 ADP-----H-AEAALAVCALIYLLAALFNLFIP 174 (393)
T ss_pred HHH-----H-HHHHHHHHHHHHHHHHHHHhcCC
Confidence 887 3 66666666655544444443333
No 176
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.21 E-value=2.4e-10 Score=117.86 Aligned_cols=156 Identities=11% Similarity=0.101 Sum_probs=115.6
Q ss_pred HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC 385 (534)
Q Consensus 306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (534)
+..+.|.+.++ +|.+..+.++..+...+...++.++.|+++||++||+.+ ..+.++..+..+...+.+
T Consensus 38 ~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~- 105 (455)
T TIGR00892 38 VTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV----------IAGGLLASLGMILASFSS- 105 (455)
T ss_pred hhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH----------HhhHHHHHHHHHHHHHhh-
Confidence 44556666555 899999999999998888899999999999999998763 344445555555555544
Q ss_pred chhHHHHHH-HHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136 386 NVALVLITW-FVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG 464 (534)
Q Consensus 386 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~ 464 (534)
+.+..+... ++.+++.+...+.....+.+.+|++|+++.|+.+....+|..++|.+.+.+.+. .+|+..|++.+
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-----~gwr~~f~~~~ 180 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES-----FGWRGSFLILG 180 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----hChHHHHHHHH
Confidence 444433322 344555554445555666677787799999999999999999999999999988 79999999998
Q ss_pred HHHHHHHHHHHhhc
Q psy14136 465 AVGSCTYFFYQVLG 478 (534)
Q Consensus 465 ~~~~~~~~~~~~~~ 478 (534)
++.+++.+..+++.
T Consensus 181 ~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 181 GLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHHHHhC
Confidence 88776655544443
No 177
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.20 E-value=4.9e-10 Score=113.89 Aligned_cols=164 Identities=12% Similarity=-0.071 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.+....+..++..........+++.++++ +|.+..+.++..+...++..++.++.|++.||+|||+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l---------- 81 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM---------- 81 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------
Confidence 456666677777777777777788888876 899999999999999999999999999999999999864
Q ss_pred HHHHHHHHHHHHHH---hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhh-hHHhHh
Q psy14136 367 AISQVIPALLVMLI---GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTAS-FLSPMV 441 (534)
Q Consensus 367 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~-~i~~~~ 441 (534)
..+..+.+++.... .....+.+...+..++.+.+.+...+.......+..| ++|++++|+.+....+|. .++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444433333222 2222244444444555555555444445555566655 559999999999999986 578999
Q ss_pred hhhcccccccChhhHHHHHHHHHHH
Q psy14136 442 AGYFLQDDETSLESWRQVFLIAGAV 466 (534)
Q Consensus 442 ~g~l~~~~~~~~~~~~~~f~~~~~~ 466 (534)
.+.+.+. .+++..++.....
T Consensus 162 ~~~l~~~-----~g~~~~~~~~~~~ 181 (402)
T TIGR00897 162 SSYAIPA-----FGEMNTLWSALAF 181 (402)
T ss_pred HHhcccc-----cchHHHHHHHHHH
Confidence 8888887 5655555444433
No 178
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.20 E-value=5.4e-10 Score=112.69 Aligned_cols=150 Identities=12% Similarity=0.076 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+.++.+.+..++...........+|.+.++ +|.+..+.|++.+...++..++.++.|++.||+|||+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~---------- 74 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY---------- 74 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------
Confidence 557777888888888888888999999987 799999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
..+.++.++......+.+ +.+...+..++.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 75 YLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 455555555555555555 66666666677777777666655555555555 4599999999999999999999999988
Q ss_pred ccc
Q psy14136 446 LQD 448 (534)
Q Consensus 446 ~~~ 448 (534)
.+.
T Consensus 154 ~~~ 156 (381)
T PRK03633 154 STE 156 (381)
T ss_pred ccc
Confidence 765
No 179
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.20 E-value=2.2e-10 Score=115.42 Aligned_cols=157 Identities=15% Similarity=0.195 Sum_probs=124.5
Q ss_pred HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY 382 (534)
Q Consensus 303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (534)
.......+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+ ..+.++.++.......
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI----------LGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH----------HHHHHHHHHHHHHHHH
Confidence 34455667778776 899999999999999999999999999999999998753 4555555555555555
Q ss_pred cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHH
Q psy14136 383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFL 461 (534)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~ 461 (534)
.+ +.+...+..++.+++.+...+....++.+..|++ |+++.++.+....+|..++|.+.+.+.+. .+|+..|+
T Consensus 76 ~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~ 149 (377)
T PRK11102 76 AQ-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAIFW 149 (377)
T ss_pred Hc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHHHH
Confidence 54 5666666666667777777777778888888866 99999999999999999999999999887 78999998
Q ss_pred HHHHHHHHHHHHHHh
Q psy14136 462 IAGAVGSCTYFFYQV 476 (534)
Q Consensus 462 ~~~~~~~~~~~~~~~ 476 (534)
+.+++.++..+....
T Consensus 150 ~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 150 VLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777666555443
No 180
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.20 E-value=3.1e-11 Score=122.02 Aligned_cols=138 Identities=15% Similarity=0.207 Sum_probs=110.7
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSL--LIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~--l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..+..+ +..+....+.+.+++..++.|++.+
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 36788899999999999999999999999999999999988766555444332 2112222356777778899999998
Q ss_pred chhhhHHHHHhcccCCCcchhhhhh-hh-hhhhHHHhhhhHHHHhhhhcC-Cchhhhhhchhh
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSS-FQ-GFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLG 233 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~-~~-~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~ 233 (534)
...+...+++.|.+|+++|+++.++ +. +..+|..++|.+++.+.++.| |+..++...+..
T Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 8999999999999999999999994 54 456888899999999999988 888877665443
No 181
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=1.3e-09 Score=113.29 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=114.8
Q ss_pred cccCChhhHHHHHH-HHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHhhhhc
Q psy14136 97 EFDWDTTTQGAILS-SFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAV-LHYGALIALRSIQGIASG 173 (534)
Q Consensus 97 ~~~~s~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~-~~~~~l~~~r~l~G~g~g 173 (534)
++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++.. ++.. ++...+.+.-++..+..|
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG 331 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 67999999999984 66789999999999999999999988776665555443321 1211 344455556666666666
Q ss_pred chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~ 243 (534)
...+...++..+..+++.+++..+ ..+..++|..+++++.|++.+.+||+..|.+.++++++..+...+.
T Consensus 332 ~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 332 MGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 667778899999999999999999 5567789999888899999999999999999888888876665544
No 182
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.19 E-value=5.3e-10 Score=113.84 Aligned_cols=157 Identities=15% Similarity=0.113 Sum_probs=118.1
Q ss_pred HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381 (534)
Q Consensus 302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (534)
....+...+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+ .++..+.+++.....
T Consensus 28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~ 96 (406)
T PRK15402 28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM----------LAGVAFFILTCLAIL 96 (406)
T ss_pred hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHHHHHHHH
Confidence 344445556665554 899999999999999999999999999999999998763 344455555555555
Q ss_pred hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136 382 YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVF 460 (534)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f 460 (534)
..+ +.+..+...++.+.+.+...+.....+.|..|++ |+++.++......++..++|.+.+.+.+. .+|+..|
T Consensus 97 ~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~~w~~~~ 170 (406)
T PRK15402 97 LAQ-SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-----LPWRGMF 170 (406)
T ss_pred HHc-cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCccHHH
Confidence 554 5555555556656666665666677778888766 88889998888888999999999998887 7899999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14136 461 LIAGAVGSCTYFFYQ 475 (534)
Q Consensus 461 ~~~~~~~~~~~~~~~ 475 (534)
++.+++.++..+...
T Consensus 171 ~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 171 VLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877776655443
No 183
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.18 E-value=4.1e-10 Score=112.54 Aligned_cols=158 Identities=11% Similarity=-0.052 Sum_probs=113.6
Q ss_pred HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136 301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI 380 (534)
Q Consensus 301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (534)
.....+...+|.+.++ +|.+..+.+++.+...++..++.+..|++.||+|||+.+ ............ .
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~-~ 72 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL----------FGSLATFAAAAG-R 72 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH----------HHHHHHHHHHHH-H
Confidence 3444555667777665 899999999999999999999999999999999987642 122222222221 1
Q ss_pred hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136 381 GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQV 459 (534)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 459 (534)
.....+...+++.-++.+.+.+.. ........+..|++ |++++++.+....+|..+++.+.+.+.+. .+|+..
T Consensus 73 ~~~~~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~ 146 (368)
T TIGR00903 73 LLDPFNYEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLL 146 (368)
T ss_pred HHHhccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHH
Confidence 122125666666667777666653 33344446666654 99999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy14136 460 FLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 460 f~~~~~~~~~~~~~~~~ 476 (534)
|++.+++.++..++.++
T Consensus 147 f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 147 IIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988776665554443
No 184
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.18 E-value=5.9e-10 Score=113.03 Aligned_cols=167 Identities=13% Similarity=0.112 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
+.......+...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+ .++
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~----------~~~ 79 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI----------LVG 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHH
Confidence 334444444444555555566777665 899999999999999999999999999999999998764 344
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
..+..+........+ +.+...+..++.+++.+...+.......+..+++ ++.+.++.+....++..++|.+.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 158 (394)
T PRK11652 80 MSIFILGTLVALFAH-SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL 158 (394)
T ss_pred HHHHHHHHHHHHHHc-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444455444444444 5555555556666655555555555666766644 99999999999999999999999998887
Q ss_pred cccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 449 DETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 449 ~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
.+|+..|++.+++.++..+.
T Consensus 159 -----~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 159 -----FGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred -----cChHHHHHHHHHHHHHHHHH
Confidence 78999999887766554443
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.17 E-value=1.1e-10 Score=121.67 Aligned_cols=152 Identities=13% Similarity=0.086 Sum_probs=112.7
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcc
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY--GALIALRSIQGIASGL 174 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~--~~l~~~r~l~G~g~g~ 174 (534)
++|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+.....+. .....+-++.+++.+.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (479)
T PRK10077 300 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAM 379 (479)
T ss_pred HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhc
Confidence 56777777777777888889999999999999999999999999999988877544321121 1222333444444443
Q ss_pred -hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHH------HhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 175 -TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCG------FLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 175 -~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~------~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
..|....++.|.+|+++|+++++ ......+|.++++.+.+ ++.+..+|++.|++.++++++.+++.+++.||
T Consensus 380 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 380 SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred cccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 34778899999999999999999 44667777777755544 44467899999999888888877777777676
Q ss_pred CC
Q psy14136 247 AP 248 (534)
Q Consensus 247 ~p 248 (534)
++
T Consensus 460 ~~ 461 (479)
T PRK10077 460 TK 461 (479)
T ss_pred CC
Confidence 54
No 186
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.17 E-value=2.5e-10 Score=115.11 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=123.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
|+|.++.++|++.+...++..++.++.|++.||+|+|+.+.++.++.++..++.++ .++++.+++.+++.|+..+...
T Consensus 234 ~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~q~l~g~~~~~~~ 311 (382)
T TIGR00902 234 AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA--IEAFPLIFLLQILHCGTFAVCH 311 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh--HhhHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999888654 4688999999999999999999
Q ss_pred hhHHHHHhcccCCCcchhhhhhhh--hhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHH
Q psy14136 177 PAMYALVGHWIPSNERSRFMSSFQ--GFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVA 239 (534)
Q Consensus 177 ~~~~~~i~~~~~~~~r~~~~~~~~--~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~ 239 (534)
+....++.+. |+++|++..+++. ..++|..+++.++|++.+++|+ ..|++.+.++++..++
T Consensus 312 ~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 312 LAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999998 9999999999653 5789999999999999999986 6677777777655433
No 187
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=1.2e-09 Score=111.40 Aligned_cols=155 Identities=13% Similarity=0.111 Sum_probs=117.9
Q ss_pred HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL 383 (534)
Q Consensus 304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (534)
.....-+|... +.++.+..+.++..+...++..++.++.|+++||+|||+.+ ..+..+.+++.+.....
T Consensus 33 ~~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----------~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 33 DLIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL----------ITGALIFTLACAATLFT 101 (413)
T ss_pred HhhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH----------HHHHHHHHHHHHHHHHc
Confidence 33344455544 45899999999999999999999999999999999999864 44555555555555555
Q ss_pred CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136 384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI 462 (534)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~ 462 (534)
+ +.+.+++.-++.+.+.+...+.......|.+|++ +++++++.+....++..++|.+++.+.+. .+|+..|++
T Consensus 102 ~-~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~f~~ 175 (413)
T PRK15403 102 T-SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVLFAI 175 (413)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHH
Confidence 5 6666666666666655554455566777888866 89999999999999999999999988877 799999999
Q ss_pred HHHHHHHHHHHHH
Q psy14136 463 AGAVGSCTYFFYQ 475 (534)
Q Consensus 463 ~~~~~~~~~~~~~ 475 (534)
.+++.+++.+..+
T Consensus 176 ~~~~~~i~~~~~~ 188 (413)
T PRK15403 176 IAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHH
Confidence 8887776665433
No 188
>KOG4332|consensus
Probab=99.15 E-value=1.3e-09 Score=98.10 Aligned_cols=345 Identities=15% Similarity=0.081 Sum_probs=193.3
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
-+.++....++|.+.-+.+-..++.+.+.|.++|+-|||+..+.-++.+.++++- -.++++-.++++|++-|+..+.
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT---KhSpqYkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT---KHSPQYKVLMVGRVLGGIATSL 140 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh---hcCCceEEEeehhhhhhHHHHH
Confidence 4477888889999988888888899999999999999999887777776666544 3457899999999999999998
Q ss_pred hhhhHHHHH-hcccCCCc-----chhhhh--hhhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhc
Q psy14136 175 TWPAMYALV-GHWIPSNE-----RSRFMS--SFQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLA 244 (534)
Q Consensus 175 ~~~~~~~~i-~~~~~~~~-----r~~~~~--~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~ 244 (534)
.+.+.-++. .|..+++. ...-++ .+.+..+-.+++.+.+..+.+++ |--.+|-..+.+..+...+.+
T Consensus 141 LFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil--- 217 (454)
T KOG4332|consen 141 LFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL--- 217 (454)
T ss_pred HHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH---
Confidence 887776654 44432211 111122 12344455666777777777765 444556544333333222222
Q ss_pred cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH-HhchhhhhHhhhCCccc
Q psy14136 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF-IIPGPRYMKTILGFSIQ 323 (534)
Q Consensus 245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~g~s~~ 323 (534)
..-.++-.+.+ |.+... ...+...+.+..++++.++..+..+.-...+.+ ..|.|..--+..+.+
T Consensus 218 ~~W~ENygdps--~~kdll----------tqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP-- 283 (454)
T KOG4332|consen 218 SSWSENYGDPS--ENKDLL----------TQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 283 (454)
T ss_pred hhhhhccCChh--hhHHHH----------HHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC--
Confidence 22111111111 111110 111223345566677666655555444444443 445554432212222
Q ss_pred cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc----C--CchhHHHHHHHHH
Q psy14136 324 TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL----G--CNVALVLITWFVA 397 (534)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~ 397 (534)
-|.+++.+.++.++|+-+..++..|-..|. ... +.+.+++..+.+.+.... + .+.....+.++..
T Consensus 284 -hGfiFatFMlASmLGSSla~Rl~s~s~~~v----e~y----mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~ 354 (454)
T KOG4332|consen 284 -HGFIFATFMLASMLGSSLASRLLSRSSPKV----ESY----MQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLF 354 (454)
T ss_pred -chhHHHHHHHHHHHhhHHHHHHHhcCCccc----chH----HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHH
Confidence 366777777777777766665555433221 111 122222222222222111 1 1344456666777
Q ss_pred HHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 398 VTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
-.+.|..+|..+-.-.+..|++ |++.+-....--++...++-.. +.+. ....+-+..|-+..+...++.+.
T Consensus 355 E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn---lh~~--~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 355 EACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN---LHVD--AFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee---cccc--cCccccchhhhhhHHHHHHHHHH
Confidence 7788888888888888888977 8887776665555444443221 1111 11134456676666666655444
No 189
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.14 E-value=2e-09 Score=109.29 Aligned_cols=175 Identities=17% Similarity=0.128 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
++.+++..+...+.........|.+ ++.+|.+..+.+++.+...++..++++..|++.||+|+|+.+ .+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~----------~~ 73 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI----------LL 73 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HH
Confidence 4455555555555554555666666 556999999999999999999999999999999999998763 45
Q ss_pred HHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 369 SQVIPALLVMLIGYL--GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
+..+.+++..++... ..+.+......++.+.+.+...+....++.+..|++ +++..++.+....+|..++|.+.+.+
T Consensus 74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555544322 225666667777778888888888888888877765 99999999999999999999998877
Q ss_pred cccccc---------------------ChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 446 LQDDET---------------------SLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 446 ~~~~~~---------------------~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
...... ...+|+.+|++.+++.++..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532000 11468999988887666554443
No 190
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.13 E-value=1.4e-09 Score=109.94 Aligned_cols=180 Identities=15% Similarity=0.089 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
|.++...+.....+...+.+....+.+-++.+|++..+.+++.++..+...+.++..|++.||+|.|+.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~---------- 103 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT---------- 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------
Confidence 5666666666666555555555556555546999999999999999999999999999999999998763
Q ss_pred HHHHHHHHHHHHHHhhc----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136 367 AISQVIPALLVMLIGYL----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
.++.++.++..+...+. ..+...+++..++.+++ +..++.....+.+.+|++ ||++.|+....+++|..+++.+
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 44445555555555543 12566666666666665 566777778888888866 9999999987777777666555
Q ss_pred hhhcc-----cccc--------cChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 442 AGYFL-----QDDE--------TSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 442 ~g~l~-----~~~~--------~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+.+. +..+ .+..+++.+.++.+.+.++..++.++.
T Consensus 183 ~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 183 APLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54432 1100 012467888777777776666665554
No 191
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.13 E-value=2.4e-09 Score=106.48 Aligned_cols=160 Identities=13% Similarity=0.103 Sum_probs=127.8
Q ss_pred hchhhhhHhhhCCcccc-chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136 308 IPGPRYMKTILGFSIQT-NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN 386 (534)
Q Consensus 308 ~~~~~~l~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (534)
.+...++.+.+|++..+ .|.+.+.+..+..+..+..|+++||+|.|+.+ .++.+.-++...+.++.. +
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~-S 114 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT-S 114 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH-H
Confidence 33444666679999999 99999999999999999999999999999864 566666666666666665 6
Q ss_pred hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136 387 VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA 465 (534)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~ 465 (534)
...+.+.-++.+.+.+..+ ....++...+|++ |+++.|+.+....+|.++++.+.+.+... +...|....++...
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~---gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTL---GWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHH
Confidence 7777777788888888888 8888888888866 99999999999999999999999984432 22455666777777
Q ss_pred HHHHHHHHHHhhcCCcc
Q psy14136 466 VGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 466 ~~~~~~~~~~~~~~~~~ 482 (534)
..++++++.+++++.++
T Consensus 191 s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 191 FMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHhCCCCch
Confidence 77888888888886555
No 192
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.07 E-value=1.6e-09 Score=113.42 Aligned_cols=153 Identities=13% Similarity=0.150 Sum_probs=110.2
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC-----chhHHHHHH
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC-----NVALVLITW 394 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 394 (534)
.+..+.+++.+...++.+++.++.|++.||+|||+.+ .++.++..++..+...... +....++.-
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r 122 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY----------GMELIIMIIATVASGLSPGSSPKSVMATLCFWR 122 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH----------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHH
Confidence 3455667888999999999999999999999999764 3444444444444343321 145566777
Q ss_pred HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc------------------cChhh
Q psy14136 395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE------------------TSLES 455 (534)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------------------~~~~~ 455 (534)
++.+++.+...+....+..|..|++ ||++.++.+....+|..+++.+...+..... ....+
T Consensus 123 ~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (502)
T TIGR00887 123 FWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM 202 (502)
T ss_pred HHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc
Confidence 7788888888888999999999976 9999999999999999888887765432100 00137
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 456 WRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
|+..+.+.++..++..+..++++|..+
T Consensus 203 WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 203 WRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999998777766666665566676644
No 193
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.06 E-value=2.4e-09 Score=108.01 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136 296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL 375 (534)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~ 375 (534)
.++...+...+..++|.|+++ +|.|..+.|++.+...+...++.++.|.+.||++|+... ++... +...+.
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~-----~~~~~-~~~~~~-- 83 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA-----LRLLA-LLTLLF-- 83 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH-----HHHHH-HHHHHH--
Confidence 555566667778889999987 799999999999999999999999999999999985321 11111 111111
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh
Q psy14136 376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES 455 (534)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 455 (534)
.+ .......+.+..++...+.+.+.+...+...+...+. .++|+++.+.......+|..++|.+.+.+.+. .+
T Consensus 84 ~~-~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-----~g 156 (382)
T PRK11128 84 AV-AFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-----FG 156 (382)
T ss_pred HH-HHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-----cC
Confidence 11 2222222555555555555555666666555555554 44578888888888999999999999999998 89
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy14136 456 WRQVFLIAGAVGSCTYF 472 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~~~ 472 (534)
|+..|++.++..++..+
T Consensus 157 ~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 157 EQAILWILTAGVASMLL 173 (382)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 99999887765544433
No 194
>KOG1330|consensus
Probab=99.06 E-value=3.9e-10 Score=109.92 Aligned_cols=175 Identities=18% Similarity=0.106 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136 289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI 368 (534)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 368 (534)
...+++.......=.+.+...++. .++.++.+....|++.....+...+.++++|++.||+.|++++ .+
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~----------~v 103 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI----------AV 103 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE----------ee
Confidence 334444444444444444433333 3445899999999999999999999999999999999999885 45
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+..+-.++.+..++.. ..|.+.+.-.+.+.+.+...+.....+.|.+|++ |++++++.++...+|..+|-..++.+.+
T Consensus 104 G~~iW~~Av~~~~fs~-~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSN-HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 5555555555555554 7788888888889999999999999999999977 9999999999999999999988888888
Q ss_pred ccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 448 DDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
. + ..|+++|+..+++.++..++.+++.+
T Consensus 183 ~--~--~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 183 L--T--FWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred C--c--cceEEEEEeehHHHHHHHHHHHhhcc
Confidence 7 2 33999999999988887777665533
No 195
>PRK09952 shikimate transporter; Provisional
Probab=99.06 E-value=1.4e-09 Score=111.83 Aligned_cols=149 Identities=15% Similarity=0.063 Sum_probs=110.3
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhcc
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g~g~ 174 (534)
++|.+......+..+..+...++.++.|+++||+|||+++..+.++.+++.+...... .++...+++..++.|++.+.
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 6677777666666666777788889999999999999999888776655543322221 12344445566777888888
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhh-hhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQ-GFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~-~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
..+...+++.|.+|++.|+.+.+ .+. +..+|+.++|.+.+++.+.. +|+..+...++..++..+..+ ..+|
T Consensus 360 ~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 360 VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 88889999999999999998888 454 44588999999999998743 488888877777776665554 3344
No 196
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.06 E-value=2.5e-09 Score=114.14 Aligned_cols=168 Identities=15% Similarity=0.194 Sum_probs=120.6
Q ss_pred HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL 383 (534)
Q Consensus 304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (534)
.++....-.-+++.++++..+.|++.+...++..++.++.+++.||.+|++.+ .++.++.+++.+++.+.
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i----------~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI----------GIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE----------EecHHHHHHHHHHHhCh
Confidence 33333333344556999999999999999999999999999999999999876 34444444444443332
Q ss_pred C-------------------------------------------------C-chhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 384 G-------------------------------------------------C-NVALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 384 ~-------------------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
+ . ....+++.-++.+++.+...+....++.
T Consensus 119 hf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~ 198 (633)
T TIGR00805 119 HFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID 198 (633)
T ss_pred HHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh
Confidence 1 0 1233445667777777777888889999
Q ss_pred ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccccc----------------C-hhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDET----------------S-LESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~----------------~-~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
|..|++ |+...|+.+....+|..+|+.+++.+.+...+ . .+.|+..|++.+++.++.++.++
T Consensus 199 d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 199 DFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred ccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988866 99999999999999999999999987753100 0 02477788888887777666666
Q ss_pred hhcCCc
Q psy14136 476 VLGTSE 481 (534)
Q Consensus 476 ~~~~~~ 481 (534)
+++++.
T Consensus 279 ~~p~~l 284 (633)
T TIGR00805 279 FFPKAL 284 (633)
T ss_pred hCcccc
Confidence 666543
No 197
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.06 E-value=4.3e-09 Score=109.00 Aligned_cols=184 Identities=17% Similarity=0.062 Sum_probs=140.0
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy14136 282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNI 361 (534)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~ 361 (534)
..+|+|.+..+++.....+++......-++-++.+ ..-|+...+++.....+..++.++++|.++||++||+.+....
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~- 82 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ- 82 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-
Confidence 35788888888888888888877777777766665 5678888899999999999999999999999999998752111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136 362 RKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~ 440 (534)
.+..++..+..++......+.+.+++..++.+.+.....|...+.+.++.|++ ...+.++.....++...+||.
T Consensus 83 -----~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPa 157 (524)
T PF05977_consen 83 -----LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPA 157 (524)
T ss_pred -----HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccch
Confidence 11111111111111222235667777778888888888999999999999876 899999999999999999999
Q ss_pred hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
++|.+... .|....|.+-++..++.+++...+
T Consensus 158 lgG~Lva~-----~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 158 LGGILVAF-----FGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988 788888988887777665554443
No 198
>KOG3098|consensus
Probab=99.05 E-value=1.9e-08 Score=100.59 Aligned_cols=314 Identities=14% Similarity=0.015 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136 109 LSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP 188 (534)
Q Consensus 109 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 188 (534)
.++-+..+.+..++.+.+.|+.|+|+.+.++...+..-.+. +.. +|-+.+++...+.|+|.+..+...-.++++..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~g--fl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLG--FLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHH--HHh-cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 67777788889999999999999999999999999887766 333 578889999999999999999999999999999
Q ss_pred CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--------cCCc-h----------hhhhhchhhHHHHHHhhhhccCCC
Q psy14136 189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--------YGWR-S----------VFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--------~gwr-~----------~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
++.+.+..+ .++....+.++|..+...+... .+-+ . ...+.+++..+..+...-... .|
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~-~p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF-LP 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee-cC
Confidence 999999999 5566777777766544333221 1111 1 111111111111111110100 11
Q ss_pred CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCcc-ccc
Q psy14136 249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSI-QTN 325 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~-~~~ 325 (534)
.+... .+.+..++ ...+......+++++|+.+.+....+..+..........|..+.-. .+.+. ...
T Consensus 212 ~~~~~---~~~~~~~~-------~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ 281 (461)
T KOG3098|consen 212 SKDVV---NCKSSSET-------SFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLI 281 (461)
T ss_pred ccchh---hhhhhccc-------cHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHH
Confidence 11110 00000000 0000111234566778887777776666665555555566555432 22222 223
Q ss_pred hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CC----------------chh
Q psy14136 326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GC----------------NVA 388 (534)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------~~~ 388 (534)
+......+++.+++....+.+.+|.++.... ..+.++..+..+..++.... +. +..
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~-------~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~ 354 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRK-------PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYY 354 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccC-------cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchh
Confidence 3444455667777777777777776553321 11233333333322222211 10 122
Q ss_pred HHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 389 LVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
...+..++.+++-.......+..+....|++|..+.++...-..++..++-...+
T Consensus 355 ~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 355 LALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4444555556666677777788888888999999999998888888777655543
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=99.05 E-value=1e-08 Score=105.14 Aligned_cols=148 Identities=16% Similarity=0.130 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 367 (534)
.+..+.+..+...+.........|.+ ++.+|.+..+.++..+...++..++.+..|++.||+|+|+.+ .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l----------~ 95 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------I 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence 44555556666666666677778877 667999999999999999999999999999999999999864 4
Q ss_pred HHHHHHHHHHHHHh--hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136 368 ISQVIPALLVMLIG--YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY 444 (534)
Q Consensus 368 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~ 444 (534)
.+..+..++.++.. ....+.....+..++.+.+.+...+.....+.+..|++ ++..+++.+....+|..++|.+++.
T Consensus 96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555554432 22336777777778888888888888888888877766 5567999999999999999988776
Q ss_pred cc
Q psy14136 445 FL 446 (534)
Q Consensus 445 l~ 446 (534)
+.
T Consensus 176 l~ 177 (438)
T PRK10133 176 LI 177 (438)
T ss_pred HH
Confidence 54
No 200
>KOG3764|consensus
Probab=99.05 E-value=8.5e-10 Score=105.31 Aligned_cols=149 Identities=14% Similarity=0.121 Sum_probs=131.1
Q ss_pred hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q psy14136 318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA 397 (534)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (534)
.+.+..+.|+++....+.+++..++.|.+.||+|+|.. +++++.+....-.++.+.. +.+.+++.=.+-
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip----------m~~Gl~vmf~sTilFafg~-sy~~l~vAR~LQ 169 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP----------MVAGLFVMFLSTILFAFGN-SYPMLFVARSLQ 169 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccH----------HHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHh
Confidence 45566789999999999999999999999999999866 4788888888888888877 777788888888
Q ss_pred HHHhhhcccccchhhhccCCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 398 VTLITASYAGAMANVVDIGPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
+.+.++......+++.+.+|++ |++++|+.-.+..+|-.+||.++|.+++. .|++..|+++++++++...+-+
T Consensus 170 gvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-----~Gk~aPFlVL~~v~Lld~~L~l 244 (464)
T KOG3764|consen 170 GVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-----AGKSAPFLVLAIVLLLDGALQL 244 (464)
T ss_pred hhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-----cCCcCcHHHHHHHHHHHHHHHH
Confidence 8888888888999999999976 89999999999999999999999999999 8999999999999998888877
Q ss_pred hhcCCcc
Q psy14136 476 VLGTSEV 482 (534)
Q Consensus 476 ~~~~~~~ 482 (534)
+..+..+
T Consensus 245 ~vi~p~~ 251 (464)
T KOG3764|consen 245 LVIEPTE 251 (464)
T ss_pred heeCccc
Confidence 7655433
No 201
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.04 E-value=3.3e-09 Score=109.13 Aligned_cols=122 Identities=17% Similarity=0.172 Sum_probs=102.2
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHH
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMY 180 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~ 180 (534)
++.+.+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888889999999999999999999999999999988888776654432 3567777888999999999999999
Q ss_pred HHHhcccC-------CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136 181 ALVGHWIP-------SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWR 223 (534)
Q Consensus 181 ~~i~~~~~-------~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr 223 (534)
++++|..+ ++++|...+++ ....+|..+++.+.+.+.+..||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999875 45578888855 678899999999999999887774
No 202
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.04 E-value=4.5e-09 Score=107.10 Aligned_cols=183 Identities=14% Similarity=0.083 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH----HHhhhcccchhHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD----QLFVRNIMSLTNIR 362 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~l~~~~~~ 362 (534)
+++..+....+..++.+.....+++.|+++ +|.+....+.+.....+.+++..++.|+++| |+|||+.+
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~------ 76 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF------ 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH------
Confidence 345566666677777888888888989876 8999999999999999999999999999999 48988764
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-------------h---hHHHHHHHHHHHHhhhcccccchhhhccCCCc-h--hHH
Q psy14136 363 KVFTAISQVIPALLVMLIGYLGCN-------------V---ALVLITWFVAVTLITASYAGAMANVVDIGPNF-A--GPI 423 (534)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~--g~~ 423 (534)
+..+.....+.+.++.+.... . +..++...+..+......+...+++.|..|++ | +.+
T Consensus 77 ---il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a 153 (477)
T TIGR01301 77 ---IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA 153 (477)
T ss_pred ---HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence 344445555555555443310 0 22233333444566666777788899988854 3 689
Q ss_pred HHHHhHHHHhhhhHHhHhhhhcc--ccc---c---cC--hhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 424 LAFAQTIHMTASFLSPMVAGYFL--QDD---E---TS--LESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 424 ~g~~~~~~~~g~~i~~~~~g~l~--~~~---~---~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.++.+....+|+.+++.+++... +.. . .+ ..+++..|++.+++.+++.++..+..+
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 99999999999999999887641 110 0 00 127888999988888877777665543
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.03 E-value=7e-09 Score=105.44 Aligned_cols=169 Identities=15% Similarity=0.018 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-----hhhcccchhHHHHHHHH
Q psy14136 293 GITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-----FVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~ 367 (534)
...++.+.........-+|.|+++ .|++.++.|++...... .+..++.|+++||+ ||||.. +.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~---------l~ 72 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW---------LL 72 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH---------HH
Confidence 344556666677777889999998 69999999998666554 68899999999999 666532 34
Q ss_pred HHHHHHHHHHHHHhhcCC--chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136 368 ISQVIPALLVMLIGYLGC--NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY 444 (534)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~ 444 (534)
++.++.++++..+.+.+. +.+......++.+++.....+...+++.|..|++ |+++.++......+|..+++.+.+.
T Consensus 73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 444555444444444421 3344444444445556666677788888988866 9999999999889999999999988
Q ss_pred cccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 445 FLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 445 l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+.+. ..+|+..|++.+++.++..+..+..
T Consensus 153 l~~~----~~gw~~~f~i~a~~~l~~~l~~~~~ 181 (402)
T PRK11902 153 LADR----VLGWGNTYLLMAGLMLAGALTTLWA 181 (402)
T ss_pred HHhc----ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 8875 0489999999888776655544333
No 204
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.02 E-value=2.2e-09 Score=91.10 Aligned_cols=134 Identities=19% Similarity=0.257 Sum_probs=102.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
+.+...++.+++.+..+++.||++||+.+ ..+..+..+..+.....+ +.+......++.+.+.+...+.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 71 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVA 71 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 34556788899999999999999998753 344444444444444444 5566666667777777777778
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
......|..|++ |+++.++.+....+|..++|.+.+.+.+. .+|+..+++.+.+.+++.+....+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHHHHHHHHHHHHHHHHHhhc
Confidence 888888988866 99999999999999999999999999888 788888888877776666555544
No 205
>PRK15075 citrate-proton symporter; Provisional
Probab=99.02 E-value=1.8e-09 Score=110.94 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=95.0
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHhhhhcc
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI-PQ-AAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~-~~-a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+|.+..+.+++...+.++..++.+++|+++||+|||+++..+.++..+..+.. .+ ...+++..+.+..++.|++.+.
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGS 347 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 578888899999999999999999999999999999999887655443322211 11 1122344444555666777777
Q ss_pred hhhhHHHHHhcccCCCcchhhhhh-hhhh-hhHHHhhhhHHHHhhhhcCCch
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSS-FQGF-SFGIGLTYPLCGFLIAHYGWRS 224 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~-~~G~~~g~~l~~~l~~~~gwr~ 224 (534)
..+....++.|.+|+++|+++.++ +... .++..++|.+.+++.++.|+++
T Consensus 348 ~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 348 YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 777777899999999999999994 4433 3457789999999999888653
No 206
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.02 E-value=1.1e-07 Score=93.62 Aligned_cols=324 Identities=15% Similarity=0.143 Sum_probs=179.3
Q ss_pred cCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhh
Q psy14136 99 DWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPA 178 (534)
Q Consensus 99 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~ 178 (534)
+-+.-..+.+.-+-.+...+..+.+.++.+|+..+.=+..+.++.+++.++.+++ ++.+.=+++-++.+++.|.....
T Consensus 55 ~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~t 132 (402)
T PF02487_consen 55 DCKSVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVT 132 (402)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHH
Confidence 3344445666666777777777788889999986666666677777887775454 68888889999999999988888
Q ss_pred HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCC--chhhhhhchhhHHHHHHhhhhccCCCCCCcccc
Q psy14136 179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGW--RSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT 255 (534)
Q Consensus 179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gw--r~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~ 255 (534)
...+.. .+++ ...+ +.++.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++.+|.++.+.+..+
T Consensus 133 fL~lt~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~ 206 (402)
T PF02487_consen 133 FLSLTH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQE 206 (402)
T ss_pred HHHHHH-hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcc
Confidence 888754 5543 2455 557888888888877666655 555 667877777776666656666665433222111
Q ss_pred hhhhhhhhhc-cCcccc---CCCCCcccHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhc-hhhhhH-hhhCCccccchhH
Q psy14136 256 RKELDYIQEN-IEPTIV---GSKGLKVPWVSILT-SPPAWAIGITTFGRIWVHYIFIIP-GPRYMK-TILGFSIQTNGLL 328 (534)
Q Consensus 256 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~g~s~~~~~~~ 328 (534)
.++.++.++. ...+.. .....+..+++-++ -|.+...++-.+..++..|.++.- .|...- ....-...+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y 286 (402)
T PF02487_consen 207 SESEDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWY 286 (402)
T ss_pred cCCCCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHH
Confidence 1111111111 111000 01111222222222 133333444445555555554332 222211 1111122344455
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH---HHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136 329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM---LIGYLGCNVALVLITWFVAVTLITASY 405 (534)
Q Consensus 329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (534)
.....++.++++--..++ |+ |++ +...+.-.+..+.++ .+.+.+ +.+..++.++.-|...|..+
T Consensus 287 ~~~YQ~GVFISRSS~~~~--ri--r~l--------wils~LQ~~nl~~~~l~s~~~fip-si~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 287 QLLYQLGVFISRSSLPFF--RI--RRL--------WILSLLQVINLVFLLLQSWYRFIP-SIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHHHHhhhhcceeee--eh--hhH--------HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHhhhHHH
Confidence 566666666665432221 22 111 112222222222211 122233 56666666666677777666
Q ss_pred cccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 406 AGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 406 ~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
......+.+ ..+++|-.++|.....-.+|..++..++-
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 666655554 44566999999999988888877776653
No 207
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.02 E-value=2.9e-09 Score=105.41 Aligned_cols=186 Identities=12% Similarity=0.070 Sum_probs=155.1
Q ss_pred hhcC-HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC----CccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhccc
Q psy14136 283 ILTS-PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG----FSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIM 356 (534)
Q Consensus 283 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l 356 (534)
.+++ |.++.+...-+.--+++|++...+..|+....+ +|.+++.-+++.+....-+..+++||++||+ |+|+.
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t- 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT- 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-
Confidence 3443 567788888888999999999999999988777 9999998888888888889999999999995 77766
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHH
Q psy14136 357 SLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHM 432 (534)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~ 432 (534)
+..+.++..++.+++.... .....+.+.+.+...+.|..=+.....+.|++|++ |-.++++..+..+
T Consensus 95 ---------I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iN 165 (498)
T COG3104 95 ---------IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGIN 165 (498)
T ss_pred ---------HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEee
Confidence 4677778888888777763 35566667777777888888888889999987643 7788999999999
Q ss_pred hhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q psy14136 433 TASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ 483 (534)
Q Consensus 433 ~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 483 (534)
+|+.++|.+.+++.+. .+|...|...++-+..+++.+...+++...
T Consensus 166 iGsl~~p~i~~~~~~~-----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 166 IGSLIAPIITGLLAIN-----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred hHHHHHHHHHHHHHHh-----hCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 9999999999999999 899999999999999999888877765443
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.99 E-value=5.9e-09 Score=104.07 Aligned_cols=149 Identities=17% Similarity=0.117 Sum_probs=109.6
Q ss_pred HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC 385 (534)
Q Consensus 306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (534)
+...+|.+.++ +|.+..+.+++.+...++..++.+..|++.||+++|+.+ .++.++..++.... ..+
T Consensus 19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~~-~~~- 85 (355)
T TIGR00896 19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV----------AAGLLLIAAGILIR-SAP- 85 (355)
T ss_pred CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH----------HHHHHHHHHHHHHH-Hhc-
Confidence 34556666655 899999999999999999999999999999999998764 33443333333333 333
Q ss_pred chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136 386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA 465 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~ 465 (534)
+.+..++..++.+++.+...+.......+..|++|+++.++.+....+|..+++.+.+.+.+. .+ .+|+..|...++
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~--~~-~~w~~~f~~~~~ 162 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH--SG-GHWQQALAWWAL 162 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hh-hhHHHHHHHHHH
Confidence 555555556666666666566666667788887899999999999999999999999888776 11 248888877665
Q ss_pred HHHHH
Q psy14136 466 VGSCT 470 (534)
Q Consensus 466 ~~~~~ 470 (534)
+.++.
T Consensus 163 ~~~~~ 167 (355)
T TIGR00896 163 PALLA 167 (355)
T ss_pred HHHHH
Confidence 54433
No 209
>PTZ00207 hypothetical protein; Provisional
Probab=98.98 E-value=7.5e-09 Score=107.76 Aligned_cols=158 Identities=15% Similarity=0.112 Sum_probs=108.8
Q ss_pred HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381 (534)
Q Consensus 302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (534)
..+.+..+.|.. ++.+|++..+.+.+....... ....++.|++.||+|+|+.+ .++.++..++.++..
T Consensus 42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vl----------lig~ll~~iG~ll~a 109 (591)
T PTZ00207 42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIF----------VLSMTVFCLGTLLFA 109 (591)
T ss_pred HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHH
Confidence 344555555554 556999999988887664333 34666789999999998764 566666666665555
Q ss_pred hc-----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136 382 YL-----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW 456 (534)
Q Consensus 382 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 456 (534)
+. ..+.+.+.+..++.+.+.+...+.....+.+.+|++||++.|+......+|+++.+.+...+... +|
T Consensus 110 la~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~------~~ 183 (591)
T PTZ00207 110 LTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD------NT 183 (591)
T ss_pred HHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hH
Confidence 54 12556666666677777666666677777888998899999999999999998655554444333 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy14136 457 RQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 457 ~~~f~~~~~~~~~~~~~~~~~ 477 (534)
+..|++.+++.++..++.+.+
T Consensus 184 ~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 184 SAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 667777777666655555444
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=8.4e-09 Score=119.04 Aligned_cols=184 Identities=13% Similarity=0.015 Sum_probs=121.1
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHhchhh----hhHhhhCC-ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136 282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPR----YMKTILGF-SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIM 356 (534)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l 356 (534)
.+++++++..+++..++..+..+.....++. .+.+..+. +....++..+...+..++..+++|+++||++||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 4566666666666665555543332222111 12111111 113456677778888999999999999999998753
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhh
Q psy14136 357 SLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTAS 435 (534)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~ 435 (534)
. .......+... +..+.+...+.+.+++..++.+.+.++..+...+++.+..|++ ++.++|+.++...+|.
T Consensus 86 ~------~~~~~~~~~~~--~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~ 157 (1140)
T PRK06814 86 K------ILKFAEIGIAA--LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI 157 (1140)
T ss_pred H------HHHHHHHHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence 1 01111111111 1122222236777788888888888888999999999988866 9999999999999999
Q ss_pred hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 436 FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 436 ~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
.+||.++|++.+. .+|+..|+..+++.+++.++.+.++
T Consensus 158 ~igp~l~g~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 158 LLGTIIGGLATIS-----GNFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999998 7888888555555554444444443
No 211
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.97 E-value=2.6e-07 Score=95.94 Aligned_cols=381 Identities=17% Similarity=0.089 Sum_probs=211.0
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+.++.+...-....+.....+.++..+.+.+..++..|.---..+.+..+...+..+........-...+++.++..|.
T Consensus 64 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 64 DNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred ccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 33444455556677778888888999999999999999988777766666555543333211222235678889999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCch-hhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRS-VFYTTGSLGAIWCVAWWFLAFDAPLKHP 252 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~-~f~i~~~~~li~~i~~~~~~~~~p~~~~ 252 (534)
..+........+.++..+.+-.+ .......|..+|..++..+.....+++ .+.....+..+..+++.......+++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 99999999999998888877788 557788889999999999988877774 5554444444434434333344444333
Q ss_pred ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 332 (534)
+.++++.+..++...+.. +.++.+.+.+..+++..............+..+.....++.++...+..............
T Consensus 224 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~ 302 (465)
T TIGR00894 224 SIHPCISKFEKKYINSSL-QGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLL 302 (465)
T ss_pred ccCCCCCHHHHHHHHhhc-ccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHH
Confidence 322222222222111111 1111111222222222222333444445555555556667777765443333333344555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV 412 (534)
Q Consensus 333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
.....++..+++.+.+++..|...+....++....+...+..+......+.............+.....+..........
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 382 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGV 382 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhh
Confidence 55667778888899999887644322222221211221221111122121110101111122222222223333333334
Q ss_pred hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
....++..+...|..+.+.+..+.+++.+.+.+... -....++ ..|.....+..+..++...+.
T Consensus 383 ~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~-~~~~~~~-~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 383 LINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGN-ILSQDSK-NVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred hhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhhe-eeCCCCc-hHHHHHHHHHHHHHHHHHHHe
Confidence 445556688899999999999999999999988776 1211122 445554444444444444443
No 212
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.97 E-value=4.3e-09 Score=104.03 Aligned_cols=177 Identities=12% Similarity=0.135 Sum_probs=110.7
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q psy14136 284 LTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK 363 (534)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~ 363 (534)
.|++.+|.+....++.++.......+.|.++++..|++..++|.+.+...+..++.+++.|.+.||++.||.+.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll------ 77 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL------ 77 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH------
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH------
Confidence 46788999999999999999999999999999888999999999999999999999999999999999887641
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh---ccCCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136 364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV---DIGPNFAGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~g~~~g~~~~~~~~g~~i~~~ 440 (534)
..+....+....++...+.+.-..-..+..++++...+..+.......- |...++.+--.|-..+.+.+|.+++..
T Consensus 78 -~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~ 156 (412)
T PF01306_consen 78 -WFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASL 156 (412)
T ss_dssp -HHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHH
Confidence 1111111111112221111100011122223333333333333222221 222333556677788888999999999
Q ss_pred hhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
+.|.+.+. +....|++.....++..++
T Consensus 157 ~~G~L~~i------~p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 157 LAGILFNI------NPNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHHHHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred Hhheeeee------CccHHHHHHHHHHHHHHHH
Confidence 99999887 3446666655544444333
No 213
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.97 E-value=1.3e-08 Score=98.61 Aligned_cols=178 Identities=19% Similarity=0.171 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
|.++...+.....+.....+....+ .+.+.+|+|+.|.+++..+..+.+.+.++..|.+.||+|.|+..
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~---------- 82 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT---------- 82 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH----------
Confidence 4445444444444444444433333 44466999999999999999999999999999999999998763
Q ss_pred HHHHHHHHHHHHHHhhcCCch-hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136 367 AISQVIPALLVMLIGYLGCNV-ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY 444 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~ 444 (534)
.+++++..+..+...+..... .+.++.+.+.....|..+......++..+|++ +|.++|+.. .+|+|..+...+.+.
T Consensus 83 ~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 83 ILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 455555555555544443222 12333333334445677788888889989877 999999999 999999999999988
Q ss_pred cccccccChhh---HHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136 445 FLQDDETSLES---WRQVFLIAGAVGSCTYFFYQVLGTSE 481 (534)
Q Consensus 445 l~~~~~~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~ 481 (534)
+... .+ |+.+..+.....++..+..++..+..
T Consensus 162 v~~~-----~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 162 VAVA-----FGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred HHHH-----HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8887 56 88888888877777777766665443
No 214
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.96 E-value=7.7e-09 Score=104.68 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=108.7
Q ss_pred cccCChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhh
Q psy14136 97 EFDWDTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-----VLHYGALIALRSIQGI 170 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-----~~~~~~l~~~r~l~G~ 170 (534)
|.|++++++|++.....+ ...++.++.|++.||+|+|+.+..+.++.++..+.. +.. .++...++....+.++
T Consensus 237 ~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
T TIGR02718 237 DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWSCSAFGSL 315 (390)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHHHHHHHHH
Confidence 579999999999988764 666778999999999999999988877664433332 211 1123334455566677
Q ss_pred hhcchhhhHHHHHhcccCC-Ccchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHH
Q psy14136 171 ASGLTWPAMYALVGHWIPS-NERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCV 238 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~-~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i 238 (534)
+.+...+...+.+.+..++ +++++.+++ .+..++|..+++.++|.+.+..||+..|++.+++.++..+
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 316 ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 7788888888888888876 788999994 4678999999999999999999999999888776666443
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.96 E-value=3.7e-09 Score=103.03 Aligned_cols=130 Identities=11% Similarity=0.120 Sum_probs=106.0
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
.+|+++.+.++..+.+..+..++.+..+++.||+|+||++.++.++.+++.++.... ++.. ....-++.|++.+..+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~--~~~~-~~~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT--HGYV-AMWFVLALGLFNSIMF 248 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc--CCHH-HHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999988888888776553222 2222 2335558899999999
Q ss_pred hhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhc
Q psy14136 177 PAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTG 230 (534)
Q Consensus 177 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~ 230 (534)
|...+...+..|++ .+.+.++.....+|..++|++.|.+.+..|.+.+|++..
T Consensus 249 P~~~s~a~~~~~~~-~~~asai~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 249 PTIFSLALNALGRH-TSQGSGILCLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHhhhhhh-hhhhHHHHHHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 99999999988653 455666556677999999999999999999999987543
No 216
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.95 E-value=4.7e-09 Score=97.06 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=114.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV-----LHYGALIALRSIQG 169 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~-----~~~~~l~~~r~l~G 169 (534)
++.+|+|.+|...+.+.-.+|..+ +++.|.+.|++|+|.++++|.+...+|..+..++.. .++|.+.+..++.|
T Consensus 29 k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 29 KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence 779999999999999999999987 588999999999999999999999999988755532 25788888888998
Q ss_pred hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136 170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
.+.+....++.....+.+| ++||++.|+. ...++++.+-..+...+.+.-.-+..+ +.+....+..++..++++..|
T Consensus 108 ~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll-~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 108 NSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLL-FLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHHHHHhhheeccC
Confidence 8888777888787788896 5899999955 788888877666665555542233333 333333333333334445444
Q ss_pred C
Q psy14136 249 L 249 (534)
Q Consensus 249 ~ 249 (534)
+
T Consensus 186 ~ 186 (250)
T PF06813_consen 186 P 186 (250)
T ss_pred C
Confidence 3
No 217
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.94 E-value=5.2e-09 Score=107.25 Aligned_cols=147 Identities=19% Similarity=0.100 Sum_probs=124.6
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCe--ehhHHHHHHHHHHHHHHHH--H----HHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTK--TVFGFSQLVTAICSLLIPQ--A----AVLHYGALIALRS 166 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~~~~~~~i~~~l~~~--a----~~~~~~~l~~~r~ 166 (534)
++++|++..+...+.-+..+..++|++++|++.||+|.| ++++.+++++.+..+...+ . ..++-+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 558999999999999999999999999999999999999 8988888887655544322 0 0246778899999
Q ss_pred HHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHHHHHhh
Q psy14136 167 IQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIWCVAWW 241 (534)
Q Consensus 167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~~i~~~ 241 (534)
+.|+..|..++...++.++..|+++.+..+|++ ...-....+||++.+.+.+..| -|+.+....++.++.+++.+
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987 4667888999999999998876 88988887777666655543
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.93 E-value=1.5e-07 Score=99.93 Aligned_cols=149 Identities=15% Similarity=0.203 Sum_probs=119.1
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVL------HYGALIALRSI 167 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~------~~~~l~~~r~l 167 (534)
.+.+|++.++...+...+....-+..+++|+++|+ +||++.+.++.++..+|.++.++...+ .....+++-.+
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL 94 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL 94 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence 34688899999999999999999999999999997 599999999999999999886553211 12346677788
Q ss_pred HhhhhcchhhhHHHHHhcccCCCc---chhhhh-hhhhhhhHHHhhhhHHHHhhhhc-------CCchhhhhhchhhHHH
Q psy14136 168 QGIASGLTWPAMYALVGHWIPSNE---RSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-------GWRSVFYTTGSLGAIW 236 (534)
Q Consensus 168 ~G~g~g~~~~~~~~~i~~~~~~~~---r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~i~~~~~li~ 236 (534)
..+|.|..-|...+...|.+++++ |-..+. .+.+.++|+.+++++.+++.+.. +|...|.+.++..++.
T Consensus 95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 889999999999999999997654 445556 44788999999999988887443 6999999998888877
Q ss_pred HHHhhhh
Q psy14136 237 CVAWWFL 243 (534)
Q Consensus 237 ~i~~~~~ 243 (534)
.++....
T Consensus 175 ~lvf~~g 181 (654)
T TIGR00926 175 LIVFMAG 181 (654)
T ss_pred HHHHHHh
Confidence 6655443
No 219
>KOG0569|consensus
Probab=98.92 E-value=1.4e-08 Score=102.50 Aligned_cols=154 Identities=16% Similarity=0.030 Sum_probs=115.6
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHH---H--HHHHHHHHHh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHY---G--ALIALRSIQG 169 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~---~--~l~~~r~l~G 169 (534)
+-|++..+..++.........+..+++.++.||+|||+.++.+..++.+..+++..+. .... . ..+++.++..
T Consensus 299 ~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 299 TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 6688999999999999999999999999999999999999999999998887754331 1111 1 1233333333
Q ss_pred hhhcc-hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 170 IASGL-TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 170 ~g~g~-~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
++.+. .-|...-+.+|.+|++.|+.++++. ....+...+-...-..+.+.+|= +.|.+..+++++..+..++.+||+
T Consensus 379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 33332 3689999999999999999999954 45555555555555556666664 778888888899899999999998
Q ss_pred CCCC
Q psy14136 248 PLKH 251 (534)
Q Consensus 248 p~~~ 251 (534)
..+.
T Consensus 458 kgr~ 461 (485)
T KOG0569|consen 458 KGRT 461 (485)
T ss_pred CCCC
Confidence 6544
No 220
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.92 E-value=3.2e-08 Score=101.61 Aligned_cols=164 Identities=17% Similarity=0.199 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhchhhhhHhhhC---Ccccc---chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136 296 TFGRIWVHYIFIIPGPRYMKTILG---FSIQT---NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~~g---~s~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 369 (534)
.++...-...+....| ++.+.++ .+..+ .+...+...++..++.++.|++.||+|||+.+ ..+
T Consensus 31 ~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l----------~~~ 99 (432)
T PRK10406 31 NLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM----------LIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH----------HHH
Confidence 3333333334333344 4455453 33332 23344555566679999999999999999864 455
Q ss_pred HHHHHHHHHHHhhcCCc-------hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136 370 QVIPALLVMLIGYLGCN-------VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 370 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
..+.++..+...+.+.. ...+.+.-++.+++.+...+....++.|..|++ ||.+.++.......|..+++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 55665555555554411 123455556777778888888889999988755 9999998887777777777765
Q ss_pred hhhccccc---ccChhhHHHHHHHHHHHHHHH
Q psy14136 442 AGYFLQDD---ETSLESWRQVFLIAGAVGSCT 470 (534)
Q Consensus 442 ~g~l~~~~---~~~~~~~~~~f~~~~~~~~~~ 470 (534)
...+.... .....+|+..|++.++..++.
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 44332110 000168999999877665543
No 221
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.91 E-value=1.4e-06 Score=88.46 Aligned_cols=253 Identities=9% Similarity=0.019 Sum_probs=156.2
Q ss_pred CccccC-----ChhhHHHHHHHHHHHHHHh-hcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH------------
Q psy14136 95 EGEFDW-----DTTTQGAILSSFYWCYILS-QVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL------------ 156 (534)
Q Consensus 95 ~~~~~~-----s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~------------ 156 (534)
+|.+.+ +.+.+.++-+...+..++. .++.+++++|++|++++-+....+.+..++.++...+
T Consensus 30 KD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~ 109 (472)
T TIGR00769 30 KDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALAD 109 (472)
T ss_pred hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHH
Confidence 667665 3468899999888887777 8999999999999999988877777776665444211
Q ss_pred -----------------HHHHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh
Q psy14136 157 -----------------HYGALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI 217 (534)
Q Consensus 157 -----------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~ 217 (534)
+.|...+.-+...+-...... ....+++|.++.+|-.|..+ +..+.++|.++++.+..++.
T Consensus 110 ~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 110 KLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122333444455555555565 78899999999999999999 55899999999998888876
Q ss_pred hh--------cCCc----hhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc
Q psy14136 218 AH--------YGWR----SVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT 285 (534)
Q Consensus 218 ~~--------~gwr----~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (534)
+. ..|. ..+.+.++.+++...+.+ .+.+....+++..+.+.+ +++++.+.......+.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~------~~k~k~k~~~~es~k~i~~ 262 (472)
T TIGR00769 190 KLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYW-WVNRNVLTDPRSYNPALK------EKKVKPKMSTMESLKFLVS 262 (472)
T ss_pred HhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCccccchhhc------cccCCCCCCHHHHHHHHHh
Confidence 32 1231 233333333343333333 332222221111111100 0111111223446778899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc----chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT----NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
+|.++.+++...+++.....+....-..+.+.+- ++.+ .|.+....++..++..++.+++.+|+|-+..
T Consensus 263 S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~ 335 (472)
T TIGR00769 263 SPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTA 335 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9999888888888877766665544444454332 3322 2333444455555666666888888887643
No 222
>TIGR00898 2A0119 cation transport protein.
Probab=98.89 E-value=1.4e-08 Score=106.57 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136 109 LSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP 188 (534)
Q Consensus 109 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 188 (534)
..+..+...++.++.+++.||+|||+++.++.++.+++.++..+......+..++.-++.+++.+...+....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34455667788888999999999999999999998888777544432222455556677777777788899999999999
Q ss_pred CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136 189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA 247 (534)
Q Consensus 189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~ 247 (534)
++.|++++| ......+|.+++|.+.+ + ...++..++++.++..++..++.+ ++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCC
Confidence 999999999 45678899999999888 4 345677788888877777666554 45664
No 223
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.88 E-value=2.3e-08 Score=99.88 Aligned_cols=154 Identities=16% Similarity=0.106 Sum_probs=106.6
Q ss_pred HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-----hhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136 306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-----FVRNIMSLTNIRKVFTAISQVIPALLVMLI 380 (534)
Q Consensus 306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (534)
+....|.++++ .|+|..+.+++... .+...+ .++.|++.||+ ||||.+ +..+.++.++....+
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~---------l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSW---------LVLTQVLLLSLLLIL 74 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHH---------HHHHHHHHHHHHHHH
Confidence 34456777776 79999999988644 444444 88999999998 565532 334444544444444
Q ss_pred hhcCC--chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh--
Q psy14136 381 GYLGC--NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-- 455 (534)
Q Consensus 381 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-- 455 (534)
.+... +.+.+....++.+.+.+...+...+++.|..|++ |+.+.|+......+|..+++.+.+.+.+. .+
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-----~g~~ 149 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-----EFAN 149 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-----cccc
Confidence 44421 3333333334444555556666778888988755 99999999999999999999999888877 44
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHh
Q psy14136 456 ------WRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 456 ------~~~~f~~~~~~~~~~~~~~~~ 476 (534)
|+..|++.+++.++..+..++
T Consensus 150 ~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 150 TGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877765554443
No 224
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.88 E-value=5.7e-07 Score=90.19 Aligned_cols=329 Identities=14% Similarity=0.035 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH----HH---------HHHHHHHHHHHHHh-h
Q psy14136 105 QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA----AV---------LHYGALIALRSIQG-I 170 (534)
Q Consensus 105 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a----~~---------~~~~~l~~~r~l~G-~ 170 (534)
.+...-.-.+..+++++..|.+.||..|.+++..+++.--++..+++.. .. .-...+++.-.+.| +
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 3444445566677888999999999999999877766533332222111 10 01111222222222 1
Q ss_pred hhcchhhhHHHHHhcccC------CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136 171 ASGLTWPAMYALVGHWIP------SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~------~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~ 243 (534)
..=.......++=.||.. ++++.+.++ +--.-.+.-+++|++.|.+.+..+.+....+.++..++..++=+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222333344455642 233344444 2235567889999999999998888888888777777766654444
Q ss_pred cc----CCCCCCcccchhhhhhhhhcc--Cccc----------cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q psy14136 244 AF----DAPLKHPRITRKELDYIQENI--EPTI----------VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI 307 (534)
Q Consensus 244 ~~----~~p~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (534)
+. ..|+-..+.++++.+..++.. .+.. ..-++....|+..+++|.+.......+++. ...++.
T Consensus 200 l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~ 278 (432)
T PF06963_consen 200 LARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFG 278 (432)
T ss_pred HHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCc
Confidence 32 222211111111100000000 0000 000112345666777776654444333333 334455
Q ss_pred hchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-
Q psy14136 308 IPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN- 386 (534)
Q Consensus 308 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 386 (534)
..+..|+.. .|+++...|.+-+...+.++.+.++..++.+|+|..+.- . +....-..+..++...+.....+
T Consensus 279 ~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G---~---~~l~~q~~~L~~~v~~~~~~~~~~ 351 (432)
T PF06963_consen 279 GLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG---L---WSLWWQWVCLALCVVSFWAPGSPF 351 (432)
T ss_pred HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH---H---HHHHHHHHHHHHHHHHHhcCCCCc
Confidence 566778887 599999999999999999999999999999999976542 1 11111111222222222221111
Q ss_pred ----hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136 387 ----VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 387 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
...++......-.+.=..=.....+++|..|+. ||+..|.-+...++...+.-.+
T Consensus 352 ~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 352 SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 111222222222222233334455667777765 9999999999998887665444
No 225
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=5e-08 Score=100.67 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=99.9
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~ 176 (534)
.+|.++...++......++..++.++.+++.||+|+|+++.++.++.+++.++..+....+++.+++..++.|+|.+...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM 337 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 55666555555555557778889999999999999999999999988888777544332467777778889999999999
Q ss_pred hhHHHHHhcccCCC-------cchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCC
Q psy14136 177 PAMYALVGHWIPSN-------ERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGW 222 (534)
Q Consensus 177 ~~~~~~i~~~~~~~-------~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gw 222 (534)
+...++++|..|.+ ++|...+++ ....+|..+|+.+.+.+.+..|+
T Consensus 338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999998754 347777755 56779999999999888877666
No 226
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.84 E-value=2.3e-08 Score=115.76 Aligned_cols=140 Identities=18% Similarity=0.201 Sum_probs=113.5
Q ss_pred CccccCChh-hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTT-TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~-~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++.+|.+.. +.|++.+...++..++.++.|+++||+++|+++.++.++.+++.++..+. .+++.++++.++.|++.+
T Consensus 260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHH
Confidence 336788888 99999999999999999999999999999999998888888877765443 477888888999999999
Q ss_pred chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHH
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIW 236 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~ 236 (534)
...+...+++.+.+|+++|++++++. ....+|.++++.+++.+... +++...|++.+.+.++.
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999954 66778887777777665442 34555666655544443
No 227
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.82 E-value=2.5e-08 Score=96.76 Aligned_cols=140 Identities=17% Similarity=0.149 Sum_probs=118.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
++++|++..++.++.-...+..+++++++|++.||+|.|+++..++++..+.++..-+. ..-..+.++-.+.|+..|.
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--EGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--cccHHHHHHHHHHHHhcch
Confidence 66999999999999999999999999999999999999999999999998887764333 2345566778899999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHH
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIW 236 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~ 236 (534)
.+..+.++..+.+|+++-++.+|+| ...-.+..+||.+.+.+.+..| -|.-+....++.++.
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iG 421 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIG 421 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 9999999999999999999999988 4677889999999998887654 566665554444443
No 228
>KOG4686|consensus
Probab=98.81 E-value=2.3e-08 Score=91.05 Aligned_cols=138 Identities=14% Similarity=0.201 Sum_probs=107.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAI-CSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
++.||+|+...+-+.+.-..-.++..++.|.++||+|++...+.+..+..+ +.....| +++.=.++..+.|+..+
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F----t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF----TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh----hhccHHHHHHHHhhhHH
Confidence 669999999999999999999999999999999999999877766554444 4444222 34444567778899888
Q ss_pred chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC---Cchhhhh-hchhhHHH
Q psy14136 174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG---WRSVFYT-TGSLGAIW 236 (534)
Q Consensus 174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~i-~~~~~li~ 236 (534)
.........++...|+++.|++.| +++..++|-.+.+.+++.+.+.-| |--+|.+ .+.++++.
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS 435 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence 777778889999999999999999 778999999999999999998744 4444443 33344443
No 229
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.78 E-value=2.2e-07 Score=96.39 Aligned_cols=178 Identities=17% Similarity=0.092 Sum_probs=120.4
Q ss_pred hcCHHHHHHHHHHHHHHHHH----HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchh
Q psy14136 284 LTSPPAWAIGITTFGRIWVH----YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLT 359 (534)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~ 359 (534)
+++++++..+....+..... ......++...++ .|-+ ....++.....++..+..++.|+++|.+|||..
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~---- 110 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF---- 110 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH----
Confidence 45566665544333333222 2222334544444 5655 566788888889999999999999999999865
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHH
Q psy14136 360 NIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLS 438 (534)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~ 438 (534)
.+.+.++..++.++....+ +....+....+.+.+.+... .....+.|..|.+ |+.+.++.....-....++
T Consensus 111 ------~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 111 ------FIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred ------HHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 4677777777777776665 77777777777777666544 3345578888866 8887777665554555567
Q ss_pred hHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 439 PMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 439 ~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
|.+...+... .+||+.|++.++...++++..+++.++
T Consensus 183 ~~ia~~~~~~-----~~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 183 PLIAQLFAAH-----SGWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred HHHHHHhccC-----CCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 7777666555 689999999988877777665555443
No 230
>KOG2504|consensus
Probab=98.76 E-value=3.7e-08 Score=101.64 Aligned_cols=174 Identities=15% Similarity=0.111 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHh----chhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136 290 WAIGITTFGRIWVHYIFII----PGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF 365 (534)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 365 (534)
|.+++..++.....+++.. +.+. +++.++.+..+++++.++......+..++.+.+.||+|.|..
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~-~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v---------- 113 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEE-LMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV---------- 113 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHH-HHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH----------
Confidence 4445555555444444332 2333 344588888889999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
.+++.++..+++++..+...-+...+..-++.+.+.++.+......+...++++|+.+.|+......+|.++-|.+..++
T Consensus 114 ~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 114 MIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 57888888888888888873333444555666777888888888888889999999999999999999999999999999
Q ss_pred ccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
.+. .||+..++..+.+.+-..+....+++
T Consensus 194 ~~~-----~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 194 LSK-----YGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHH-----hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999 89999999998888766666665544
No 231
>KOG2615|consensus
Probab=98.74 E-value=2.3e-08 Score=95.16 Aligned_cols=116 Identities=20% Similarity=0.222 Sum_probs=89.0
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT 399 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (534)
.+...+|++-+.+.+...+.++..|.++||+|||..+ .++.+..++...+++... +....+..=++.+.
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl----------l~c~~~va~s~ll~~~S~-~F~afv~aR~l~Gi 133 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL----------LACLIGVALSYLLWALSR-NFAAFVLARFLGGI 133 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhh
Confidence 3556788999999999999999999999999999763 566666677666666654 44222222344443
Q ss_pred HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+- .......+++.|+.+++ |+.+++..+....+|.++||.++|++..
T Consensus 134 ~k-gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 134 FK-GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cc-CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 33 33455678888988765 9999999999999999999999999987
No 232
>KOG0637|consensus
Probab=98.69 E-value=3.1e-07 Score=89.73 Aligned_cols=250 Identities=16% Similarity=0.112 Sum_probs=145.9
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCeehhHHH-HHHHHHHHHHHHHHHH---------------H
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKTVFGFS-QLVTAICSLLIPQAAV---------------L 156 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~l~~~-~~~~~i~~~l~~~a~~---------------~ 156 (534)
++|++....+.+--+..+...+.+|+.|..+|| |||||.++.. .++.+++.++.+++.- .
T Consensus 61 ~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r 140 (498)
T KOG0637|consen 61 SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR 140 (498)
T ss_pred HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence 778888888888888888899999999999995 7988766554 5555666666555520 0
Q ss_pred HHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchh-hhhhh-hhhhhHHHhhhhHHHHhhhhcCCchh--hhhhchh
Q psy14136 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSR-FMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSV--FYTTGSL 232 (534)
Q Consensus 157 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~-~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~--f~i~~~~ 232 (534)
....++++-.+.=++.-.....+-+++.|...++++.+ +++.+ ....+|..+|..+++++ +|+-. |.....+
T Consensus 141 ai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~ 216 (498)
T KOG0637|consen 141 AIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTAC 216 (498)
T ss_pred HHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHH
Confidence 12344455555556666788899999999997777666 77766 57788999988887743 44432 2222222
Q ss_pred hHHHHHHhhhhc-------cCC------CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhh-cCHHHHHHHHHHHH
Q psy14136 233 GAIWCVAWWFLA-------FDA------PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSIL-TSPPAWAIGITTFG 298 (534)
Q Consensus 233 ~li~~i~~~~~~-------~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 298 (534)
-+.+..+-..+. .++ |+++++..+. ...+.+..+..........+. ..|..+.+++...+
T Consensus 217 ~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~------~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~ll 290 (498)
T KOG0637|consen 217 DLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG------TTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLL 290 (498)
T ss_pred HHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc------ccccccccCcchHHHHhchHhhCChhHHHHHHHHHH
Confidence 222211111111 111 1111111000 000000000000000001111 23678888888888
Q ss_pred HHHHHHHHHhchhhhhHh-hhCCccccc----------------hhHhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136 299 RIWVHYIFIIPGPRYMKT-ILGFSIQTN----------------GLLTGAPFLCSYLSSVLFCYLADQLFVRNIM 356 (534)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~-~~g~s~~~~----------------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l 356 (534)
...+...+..+...++-+ .++-++... .+=+.+..+...+.+....++.+|+|-|+.+
T Consensus 291 tW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y 365 (498)
T KOG0637|consen 291 TWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRY 365 (498)
T ss_pred HHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEE
Confidence 888888887777777643 455443221 1234455667777788888999999955543
No 233
>PRK09669 putative symporter YagG; Provisional
Probab=98.68 E-value=3.9e-07 Score=93.90 Aligned_cols=121 Identities=14% Similarity=0.178 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136 103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL 182 (534)
Q Consensus 103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 182 (534)
...+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+...++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666777888889999999999999999999888776654443222223467778888899999999999999999
Q ss_pred HhcccCCC-------cchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136 183 VGHWIPSN-------ERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWR 223 (534)
Q Consensus 183 i~~~~~~~-------~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr 223 (534)
++|..+.+ +.|...+.+ ....+|..+|+.+++.+.+..|+.
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998632 234445544 466899999999999998887763
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.2e-06 Score=84.72 Aligned_cols=163 Identities=15% Similarity=0.068 Sum_probs=123.0
Q ss_pred HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY 382 (534)
Q Consensus 303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (534)
....+.-+-+.+++.++.+..+++++......+..+.++..+++.+|+|+|+. +.++..+.+++..++..
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g----------i~lgL~l~avg~~lF~p 97 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG----------IVLGLLLYAVGAALFWP 97 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHhh
Confidence 34445555667788899999999999999999999999999999999999986 36777777777776643
Q ss_pred cC--CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc----------
Q psy14136 383 LG--CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD---------- 449 (534)
Q Consensus 383 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~---------- 449 (534)
.. ..+...+...++.+.+.+........++..+.|++ ...-+.+.+.+..+|++++|.+++.+....
T Consensus 98 Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 98 AASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 32 14556666677778888888888899999888765 888899999999999999999999988730
Q ss_pred ----ccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 450 ----ETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 450 ----~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
......++.++...+.+.++..+...
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 00012355666666665555444433
No 235
>KOG2532|consensus
Probab=98.67 E-value=6.6e-08 Score=98.54 Aligned_cols=154 Identities=19% Similarity=0.273 Sum_probs=125.3
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHH
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWF 395 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 395 (534)
.+.++..+-+++.+....+.+++.+..|++.||+|.|+++ ..+.++.++.-++..+.. .+.+.+++.-+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~----------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF----------FISGLISALLTLLTPLAASIGFYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 4788889999999999999999999999999999999874 444445555444444432 23445667778
Q ss_pred HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
+.|++.+..++........-.|.. |++..++......+|.+++-.+.|++.+. . .||+.+|++.+++.++..+++
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~--~GW~sifY~~g~~g~i~~~~w 212 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--S--LGWPSIFYVFGIVGLIWFILW 212 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--C--CCCchHHHHHHHHHHHHHHHH
Confidence 888889999999999999988855 99999999999999999999999999887 2 799999999999998888887
Q ss_pred HhhcCCcccc
Q psy14136 475 QVLGTSEVQP 484 (534)
Q Consensus 475 ~~~~~~~~~~ 484 (534)
+.+...++++
T Consensus 213 ~~~~~d~P~~ 222 (466)
T KOG2532|consen 213 FLFYSDSPSK 222 (466)
T ss_pred HHHhcCCccc
Confidence 7776654444
No 236
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.64 E-value=1.3e-07 Score=96.94 Aligned_cols=175 Identities=15% Similarity=0.143 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH----HHhhhcccchhHHHHHHHHHHHHH
Q psy14136 297 FGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD----QLFVRNIMSLTNIRKVFTAISQVI 372 (534)
Q Consensus 297 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~l~~~~~~~~~~~~~~~~ 372 (534)
+...........+++.|+.+..|.++...+.+.....+...+..++.|.++| |+||||.. +.++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~---------~l~g~i~ 81 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW---------ILIGAIL 81 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE---------eehhhHH
Confidence 4445555566678888999989999999999999999999999999999999 78887765 4566666
Q ss_pred HHHHHHHHhhcCC-------chhHHHHHHHHHHHHhhhcccccchhhhccCCC--chhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 373 PALLVMLIGYLGC-------NVALVLITWFVAVTLITASYAGAMANVVDIGPN--FAGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 373 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
.++++.++...++ ...+..+..++...+.........++..|+.++ +|.+..+.......+|..+...+.+
T Consensus 82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 6666666554411 112334444444556666666667788888763 4999999999999898877777777
Q ss_pred hcccccccCh--hhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 444 YFLQDDETSL--ESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 444 ~l~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
.+.+..+.+. .+|+...++.+++.+++.++..+..|+
T Consensus 162 ~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 162 ILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 7765422111 268888888877777766665555443
No 237
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=4.3e-07 Score=91.35 Aligned_cols=177 Identities=14% Similarity=0.150 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ 370 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 370 (534)
.+....+++++....+..+.|.|+++ .|+|..++|.+.+...+..+++.++.|.++||.++++.. ..+..
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~---------l~~~~ 75 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI---------LALLS 75 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH---------HHHHH
Confidence 34556667777777788889999998 689999999999999999999999999999998765432 23444
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhh-hhccccc
Q psy14136 371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVA-GYFLQDD 449 (534)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~-g~l~~~~ 449 (534)
++.++.+....... +.+......++..++.....|...+...+...+ ++.-.|-....+.+|-.++.... +.+...
T Consensus 76 l~~~~~~~~~~~~~-~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~- 152 (400)
T PF03825_consen 76 LLSALALLLLAFSS-SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD-RGKDYGRIRLWGSIGFIVAALAFGGLLGGY- 152 (400)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc-ccCCCCcchhhhhHHHHHHHHHHHHHHHhh-
Confidence 45555454444444 555555555555555554555555555443332 33334444555555555554332 222222
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136 450 ETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE 481 (534)
Q Consensus 450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 481 (534)
.+..+....+++.+.+.++.....+.+++.+
T Consensus 153 -~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 153 -LGISGTSLIFYIAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred -hccccccHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 1002233345555554444444444455443
No 238
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.61 E-value=1.9e-07 Score=90.37 Aligned_cols=133 Identities=29% Similarity=0.548 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136 103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL 182 (534)
Q Consensus 103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~ 182 (534)
.+.++..+.+.++..++.++.|+++||+|||+.+..+.....++.+++.+....+.+.+++.|+++|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 57899999999999999999999999999998888888765565555544431248999999999999999999999999
Q ss_pred HhcccCC-Ccchhhhh-hhh-hhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHH
Q psy14136 183 VGHWIPS-NERSRFMS-SFQ-GFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAI 235 (534)
Q Consensus 183 i~~~~~~-~~r~~~~~-~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li 235 (534)
+.++.|+ ++|+...+ ... ...+|..+++.+++.+... .+||..|.+.......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9999987 67888888 445 4677888888777766654 5799977666555443
No 239
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.61 E-value=8.4e-07 Score=92.17 Aligned_cols=175 Identities=11% Similarity=0.072 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH----hhhcccchhHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL----FVRNIMSLTNIRKVFT 366 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~l~~~~~~~~~~ 366 (534)
...+..+..+.....+..+++.|+.+..|+++..+|.++.+..+...+..++.|+++||. ||||.. +
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~---------i 80 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW---------I 80 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh---------H
Confidence 334444555666777788899999999999999999999999999999999999999954 776543 4
Q ss_pred HHHHHHHHHHHHHHhhcCC---c--hhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHh
Q psy14136 367 AISQVIPALLVMLIGYLGC---N--VALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSP 439 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~ 439 (534)
.++.+..++.+.++...+. . ..+..+..++...+.........+...|+.+ ++|.+..+......++|+.+.+
T Consensus 81 l~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~ 160 (473)
T PRK10429 81 LIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA 160 (473)
T ss_pred hhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555444433221 1 1233333344445555666666777788764 4499989887777777766665
Q ss_pred Hhhhhcccccc--cChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 440 MVAGYFLQDDE--TSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 440 ~~~g~l~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
.+...+.+..+ ....+|.....+.+++.+++.+..
T Consensus 161 ~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~ 197 (473)
T PRK10429 161 GFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIIT 197 (473)
T ss_pred HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 55443322100 111356666556555555444433
No 240
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1.5e-06 Score=87.02 Aligned_cols=182 Identities=11% Similarity=0.094 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ 370 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 370 (534)
...+.-+...+.......|+..|+.+..|+++..+|.++.+.-+...+.-++.|.++||..+|... ++++++.+.
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr-----fRP~lL~g~ 90 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR-----FRPWLLWGA 90 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc-----ccHHHHHHh
Confidence 344455556667777788999999999999999999999999999999999999999987765543 455566666
Q ss_pred HHHHHHHHHHhhcC-----CchhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 371 VIPALLVMLIGYLG-----CNVALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 371 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
+..++...+....+ ....+..+...+...+......+..++..++.+ ++|.+..+.-.....+|..+...+.+
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~ 170 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP 170 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555554444 245566666777777777777777778777664 55999999999999999887777766
Q ss_pred hcccccccC--hhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 444 YFLQDDETS--LESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 444 ~l~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
.+....+.+ ..||+....+.+++.++..+..++-
T Consensus 171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~ 206 (467)
T COG2211 171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFN 206 (467)
T ss_pred HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 665542221 3577777777777766666555544
No 241
>KOG0254|consensus
Probab=98.54 E-value=1.3e-06 Score=91.76 Aligned_cols=143 Identities=16% Similarity=0.152 Sum_probs=115.6
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS 404 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (534)
.+++.+...++..++.++.|+++|++|||+.+ .++.+...++.++..... +...+.+.-++.+++.|..
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l----------~~~~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL----------LLAVVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhh
Confidence 37999999999999999999999999999764 566666667777777776 8888899999999999999
Q ss_pred ccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 405 YAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 405 ~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
......+..|+.|++ ||...+..+....+|..++ .+.+..... .. .+|+..+.+..+..++..+..++.++..+
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~--~~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSK--VY-AGWRIPLGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhcc--CC-ccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 989999999999986 9999999999998877777 666666555 11 48998888887777777776555565433
No 242
>PRK11462 putative transporter; Provisional
Probab=98.54 E-value=1.9e-06 Score=88.98 Aligned_cols=176 Identities=11% Similarity=-0.014 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy14136 294 ITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIP 373 (534)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~ 373 (534)
+.-+..+.....+..|+..|+.+..|+++..+|.+..+.-+...+.-++.|+++||...|.-. |+..+.++.+..
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr-----~rp~il~g~i~~ 90 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK-----FRPWVLFGALPF 90 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC-----cchhHhHHHHHH
Confidence 344445556666778889999999999999999999999999999999999999986443222 233355565555
Q ss_pred HHHHHHHhhcCC-c----hhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 374 ALLVMLIGYLGC-N----VALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 374 ~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
++...++...+. + ..+..+..++...+......+..++..|+.+ ++|.+..+.......+|..+++.+...+.
T Consensus 91 ~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 91 GIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544433321 1 2334444444555666666666777778776 34999999999999988888777655544
Q ss_pred cccc--cChhhHHHHHHHHHHHHHHHHHHH
Q psy14136 447 QDDE--TSLESWRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 447 ~~~~--~~~~~~~~~f~~~~~~~~~~~~~~ 474 (534)
...+ ....+|.....+.+++.+++..+.
T Consensus 171 ~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~ 200 (460)
T PRK11462 171 NLIGGDNKPLGFQGGIAVLSVVAFMMLAFC 200 (460)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 3311 111356666666665554444433
No 243
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.50 E-value=1.4e-06 Score=80.65 Aligned_cols=136 Identities=19% Similarity=0.189 Sum_probs=92.8
Q ss_pred HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136 301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI 380 (534)
Q Consensus 301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (534)
...|.+..|.|.. ++.+|+|.++...+.....++..+ .+..|.+.||++.+..+ .++.+...++...+
T Consensus 16 Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l----------~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 16 GTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVL----------LIGAVLGFVGYGLL 83 (250)
T ss_pred CcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHH----------HHHHHHHHHHHHHH
Confidence 3455566666655 556999999999998888888876 48899999999987653 45555555555443
Q ss_pred hhc--C----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 381 GYL--G----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 381 ~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
... . .+.+...+..++.+.+.............+.+|++||++.|+.-....+++.+-..+...+.+.
T Consensus 84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 332 1 1233333333444333333334444555578899999999999999999999888887777666
No 244
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.49 E-value=2.9e-06 Score=80.87 Aligned_cols=144 Identities=12% Similarity=0.050 Sum_probs=112.6
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT 175 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~ 175 (534)
|-|+|..+.|++.+...+..+..++....+++|. .+|+..+...+++.+|...+.++..++++.. -++.|+|.|..
T Consensus 237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~ 313 (395)
T COG2807 237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGA 313 (395)
T ss_pred HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchH
Confidence 7799999999999999999999999999999975 5778888888888887776555543333322 48999999999
Q ss_pred hhhHHHHHhcccCCCcchhhhh-hh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhh
Q psy14136 176 WPAMYALVGHWIPSNERSRFMS-SF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFL 243 (534)
Q Consensus 176 ~~~~~~~i~~~~~~~~r~~~~~-~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~ 243 (534)
++.+..++.+-.+..+..-..+ +. ....+=..+||.+.|++-+.. +|+...+..+...++..+.-+..
T Consensus 314 F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 314 FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999887666555444 44 345566778999999998874 69999988877776665555443
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.47 E-value=2.7e-06 Score=87.98 Aligned_cols=179 Identities=14% Similarity=0.064 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHh---hhcccchhHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLF---VRNIMSLTNIRK 363 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~---~~~~l~~~~~~~ 363 (534)
+....+...++..... ......++.++++.+|.+..+.+.+.+...+...+-.+ .|.++||++ +| |+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r--------Rr 95 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT--------KR 95 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc--------ch
Confidence 3344555566777777 77777888888888999999998888888888777555 999999995 22 22
Q ss_pred HHHHHHHHHH-HHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchh---HHHHHHhHHHHhhhhHHh
Q psy14136 364 VFTAISQVIP-ALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAG---PILAFAQTIHMTASFLSP 439 (534)
Q Consensus 364 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g---~~~g~~~~~~~~g~~i~~ 439 (534)
+.+.++.++. .+.+..+...+..........++..++.+..-.....+..|..+++++ ...++......+|..+++
T Consensus 96 ~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 96 WYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 3344444444 233333333232223333345555666666666677777777663333 334444444568999999
Q ss_pred HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
.+.|.+.+. .+|+..|++.+++.++..+..++++++
T Consensus 176 ~l~G~l~~~-----~~~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 176 LLGGPLLDK-----TLTRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred HHHHHHHHh-----cCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 999999988 789999999888877775555555543
No 246
>KOG3762|consensus
Probab=98.46 E-value=1.9e-07 Score=92.85 Aligned_cols=145 Identities=18% Similarity=0.189 Sum_probs=125.7
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
-+|++-.+.-.|.....-..+-.+.-++.+++..|+|+-+++..++...++=.+..++. +|.|..+-..+++|+..+.
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGITHAL 475 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHHHHHH
Confidence 34666667777777777778888888899999999999999999999998887774444 7999999999999999999
Q ss_pred hhhhHHHHHhcccCCCcchhhhhhh--hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhh
Q psy14136 175 TWPAMYALVGHWIPSNERSRFMSSF--QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWW 241 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~r~~~~~~~--~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~ 241 (534)
.|.+..+++++..||+-|..+.++. ...++|-.+|+++||.+.+.+|=|..|.+.++.+++..+...
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999944 467899999999999999999999999999888887665544
No 247
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=1.6e-08 Score=104.44 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=108.8
Q ss_pred chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHhh
Q psy14136 325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG--CNVALVLITWFVAVTLIT 402 (534)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 402 (534)
.++..+...++.++|+++.|++.||+|||+.+ .++..+..++.++..+.+ .+.+...+.-++.+++.|
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g 117 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPAL----------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG 117 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccc----------cccccccccccccccccccccccccccccccccccccc
Confidence 56778888999999999999999999999875 455555555555555543 245666677777888888
Q ss_pred hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136 403 ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE 481 (534)
Q Consensus 403 ~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 481 (534)
...+....++.|..|++ |+...++.+....+|..++..+.-.+.+. .+..+|+..+++.++..++..+...+++|..
T Consensus 118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP 195 (451)
T PF00083_consen 118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY--SDNWGWRILLIFGAIPSLLVLLLRFFLPESP 195 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 88999999999998866 99999999998888888877765444332 1114688888888877766666666666654
Q ss_pred c
Q psy14136 482 V 482 (534)
Q Consensus 482 ~ 482 (534)
+
T Consensus 196 ~ 196 (451)
T PF00083_consen 196 R 196 (451)
T ss_pred c
Confidence 3
No 248
>KOG3574|consensus
Probab=98.40 E-value=2e-05 Score=75.29 Aligned_cols=329 Identities=10% Similarity=0.011 Sum_probs=170.7
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhcccchhhc-----ccCCeehh-HHHHHHHHHHHHHHHHH---------HHHHHHHHH
Q psy14136 98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQ-----RFGTKTVF-GFSQLVTAICSLLIPQA---------AVLHYGALI 162 (534)
Q Consensus 98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l-~~~~~~~~i~~~l~~~a---------~~~~~~~l~ 162 (534)
=|.|.++.+...-++ ..+ ..-+.+.++.| |+||||.- .-+..+.+....+.+.- ..++...+.
T Consensus 60 k~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt 137 (510)
T KOG3574|consen 60 KGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALT 137 (510)
T ss_pred CCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHH
Confidence 356666666543322 222 23467888899 99998853 33444433333332110 112223333
Q ss_pred HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-----h--cCCc---------hh
Q psy14136 163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-----H--YGWR---------SV 225 (534)
Q Consensus 163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-----~--~gwr---------~~ 225 (534)
..-++.-+..+....+.-.+.-.+..+++.|-+...+ .+.+.|..++..+.-.+.. . .+|. ..
T Consensus 138 ~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy 217 (510)
T KOG3574|consen 138 LLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGY 217 (510)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHH
Confidence 3445555666666777777777778788877766644 3555665555433222221 1 2333 22
Q ss_pred hhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHH
Q psy14136 226 FYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYI 305 (534)
Q Consensus 226 f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (534)
.++.+.+.++...+..+.-+|.++.. ++++... .+..-.-++++++-|.+..++......-.++.+
T Consensus 218 ~~fwg~~~~vat~Lv~~~kke~~~~~---~~e~~~~-----------i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a 283 (510)
T KOG3574|consen 218 LWFWGALFIVATTLVALLKKENDESV---DEELELG-----------IHESYKLLRDVLKLKSVRWLAGILLTGKLGFQA 283 (510)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCchhh---hhhhhcC-----------HHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhh
Confidence 34445555555555554433332221 0111000 011112346677778887777777777777777
Q ss_pred HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhh-hcccchhHHHHHHHHHHHHHHHHHH-HHHhhc
Q psy14136 306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFV-RNIMSLTNIRKVFTAISQVIPALLV-MLIGYL 383 (534)
Q Consensus 306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 383 (534)
-....+.-+.| .|.+..+.+++..+ .++..+..+++..|+.. ++.+.. ..|.....+........+ ......
T Consensus 284 ~da~t~LkLle-~Gv~ke~Lal~~v~----~~plqI~l~~~~gk~ta~~~pl~~-~lka~~~R~~~~~~~t~Lv~~~~~~ 357 (510)
T KOG3574|consen 284 ADALTSLKLLE-HGVPKEELALIAVP----LVPLQIALPLYIGKWTAGPRPLNV-FLKAVPYRLGGGLVQTALVWWTPTL 357 (510)
T ss_pred hhhccchHHHH-cCCChhHheeeeee----hhhHHHhhhhhheeecCCCCcchH-HHHhhhHHHHHHHHHHHHHhhhccc
Confidence 77777877877 79998887766544 44444444444444432 111111 111111122222222222 222222
Q ss_pred CC---c--hhHHHHH---HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 384 GC---N--VALVLIT---WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 384 ~~---~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.. . ....++. ..+..+.....+...++..+.+.++. .|+.+.+.|+..++|+-.-..+..++.|.
T Consensus 358 ~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 358 GHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred ccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence 11 1 1111111 22222222333334455566777766 99999999999999998877788788775
No 249
>KOG0253|consensus
Probab=98.39 E-value=2.6e-07 Score=87.52 Aligned_cols=128 Identities=15% Similarity=0.181 Sum_probs=94.2
Q ss_pred HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcchhhhHHHHHhcccCCC
Q psy14136 113 YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY--GALIALRSIQGIASGLTWPAMYALVGHWIPSN 190 (534)
Q Consensus 113 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~--~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 190 (534)
.+.-.-|.++.+++.||+|||+.+..+.+++++..++.-.....+. .++..+|++ .++.+.+.+.+..|.+|.+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccchh
Confidence 3444567788999999999999999999999998887533322222 233445544 4455677888999999999
Q ss_pred cchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136 191 ERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD 246 (534)
Q Consensus 191 ~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~ 246 (534)
-|+...| ..+..-+|+++.|.++ +....+-..+..+.+.+.++..+...++.-|
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence 9999999 5578889999999988 3333345566667778888877777766434
No 250
>KOG0255|consensus
Probab=98.39 E-value=2e-06 Score=90.67 Aligned_cols=146 Identities=18% Similarity=0.236 Sum_probs=118.0
Q ss_pred hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q psy14136 318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA 397 (534)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (534)
...+.....+..++..++..+|.++.|.++||+|||+.+ .+++++..++-+...+.+ +.+...+.-++.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~----------~~~~~~~~i~~~~~a~a~-~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL----------LVSLLLFIIFGILTAFAP-NYWMFLIFRFLS 181 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH----------HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHH
Confidence 456667778888999999999999999999999999874 566677777777777776 888888888999
Q ss_pred HHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136 398 VTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
+++.+........+..|..+++ |+.+..+ ......++.+++...+++... |+..+++..+..++.++..++
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~-------Wr~~~~~~~~~~~~~~~~~~l 253 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD-------WRWLFWIISIPSGLFLLLWFL 253 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHc
Confidence 9999988888999999987655 9999999 888888899999998887664 888998888877766666444
Q ss_pred hcCCcc
Q psy14136 477 LGTSEV 482 (534)
Q Consensus 477 ~~~~~~ 482 (534)
.+|..+
T Consensus 254 ~~Es~r 259 (521)
T KOG0255|consen 254 PPESPR 259 (521)
T ss_pred cCcChH
Confidence 334433
No 251
>KOG3810|consensus
Probab=98.33 E-value=6.3e-06 Score=77.67 Aligned_cols=344 Identities=11% Similarity=0.061 Sum_probs=198.7
Q ss_pred HHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhh
Q psy14136 117 ILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFM 196 (534)
Q Consensus 117 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~ 196 (534)
.+.-.+.=.+.|..-.|++++.-.+.......+ +...++.+.+=+.-+..|...+ ...+-++++-+..+|+++.++.
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~--lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt 132 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIM--LVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVT 132 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHH--HHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHH
Confidence 334444456889999999887766665555555 3344688888889999999865 5788899999999999999999
Q ss_pred h-hhhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCcc--cc
Q psy14136 197 S-SFQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPT--IV 271 (534)
Q Consensus 197 ~-~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~ 271 (534)
+ .-+..-.|...|..++-.+...- +++..=.+.-. ........-.++|..+++.....++++.. ..+.++. +.
T Consensus 133 ~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~-~~~ia~~~A~fLP~v~rSl~f~~~~~~~~-v~~~e~~~~~~ 210 (433)
T KOG3810|consen 133 GYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLA-EVTIAVLLALFLPRVKRSLYFHRLEDKIS-VGDLEEMNPQA 210 (433)
T ss_pred HHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHH-HHHHHHHHHhhCCCCchhhhhhcccccce-eccchhcCccc
Confidence 9 55777777777777777776542 23332223222 22223333445555443221111111110 0000000 00
Q ss_pred CCCC--------CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC-CccccchhHhhhHHHHHHHHHHH
Q psy14136 272 GSKG--------LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG-FSIQTNGLLTGAPFLCSYLSSVL 342 (534)
Q Consensus 272 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~s~~~~~~~~~~~~~~~~~~~~~ 342 (534)
+..+ -...+.+..++|++....+-+.+...+++.+..+.-..-.+... -.....|..=....+.+.++.+.
T Consensus 211 ~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~ 290 (433)
T KOG3810|consen 211 SYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALA 290 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence 0000 01123344567777666666666666666666665544444211 11112344455566777778888
Q ss_pred HHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh-ccCCCchh
Q psy14136 343 FCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV-DIGPNFAG 421 (534)
Q Consensus 343 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g 421 (534)
.|.+--.+.|.. ...+.++.+..+..++.+.... +.|+..+..++.........+.....++ ++..+.-|
T Consensus 291 ~g~l~i~w~r~g--------~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~g 361 (433)
T KOG3810|consen 291 AGYLNINWNRWG--------DLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFG 361 (433)
T ss_pred HHheeeccchhh--------HHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhe
Confidence 887765555442 2345666666676777777766 7787777777776666665555544444 44445588
Q ss_pred HHHHHHhHHHHhhhhHHhHhhhhcccccc------cChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 422 PILAFAQTIHMTASFLSPMVAGYFLQDDE------TSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 422 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
..+|+.+++.-+-..+-..+ +.|..+ +...-|..-|.+.+++.+++..+....
T Consensus 362 LvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 362 LVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred eeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 99998887766655554443 334201 111224445777777777776654443
No 252
>KOG2533|consensus
Probab=98.30 E-value=2.3e-06 Score=87.59 Aligned_cols=154 Identities=13% Similarity=0.147 Sum_probs=115.2
Q ss_pred hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q psy14136 316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWF 395 (534)
Q Consensus 316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (534)
+..+....+.+.+.+++.++.+++.+.++.+.||++..+.+ ....++-++...+..... +.+..++.-+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l----------~~~~~~w~~~~~~~~~~~-s~~~~ialr~ 142 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL----------SVSGILWGLFGFLTAAVH-SFPGLIALRF 142 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH----------HHHHHHHHHHHHHHHHHh-hhHHHHHHHH
Confidence 44667778899999999999999999999999999954332 122222222222222233 7778888889
Q ss_pred HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc-ccChhhHHHHHHHHHHHHHHHHHH
Q psy14136 396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD-ETSLESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-~~~~~~~~~~f~~~~~~~~~~~~~ 473 (534)
+.+.+.+..+|....++...+.+. ||..+|+..+...+|+++|+++...+.... ..+..||++.|++-+++.++..++
T Consensus 143 llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 999999999999999999988755 999999999999999999999987764321 122479999999999888776665
Q ss_pred HHh-hcCC
Q psy14136 474 YQV-LGTS 480 (534)
Q Consensus 474 ~~~-~~~~ 480 (534)
.++ ++..
T Consensus 223 ~f~~lp~~ 230 (495)
T KOG2533|consen 223 VFFFLPDN 230 (495)
T ss_pred EEEEecCC
Confidence 544 4443
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.21 E-value=1e-06 Score=65.97 Aligned_cols=73 Identities=11% Similarity=0.184 Sum_probs=65.6
Q ss_pred ccCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136 86 LLEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGA 160 (534)
Q Consensus 86 ~~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~ 160 (534)
+.|.|.+|. ++|.++|.++.||+.+..++||.+|++...++.++..+++.+..++++..+..+.+++. ++++.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~~ 82 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFWL 82 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchHH
Confidence 467889999 99999999999999999999999999999999999999999999999999999987776 34443
No 254
>KOG0252|consensus
Probab=98.13 E-value=8.4e-06 Score=79.97 Aligned_cols=109 Identities=12% Similarity=0.164 Sum_probs=75.1
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc--CCc----hhHHHHH
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL--GCN----VALVLIT 393 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ 393 (534)
++....+.+.....++.++|+++.|++.||+|||+++. ..+++..++-++.+.. ... ..++...
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG----------~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~ 150 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG----------KELIIMIICSALSGLSVGTTSPLGVMMTLCFF 150 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh----------HHHHHHHHHHHHhccCCCCCCCcchhhHHHHH
Confidence 45566777888888999999999999999999998862 2222222222222222 112 2344455
Q ss_pred HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHH
Q psy14136 394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLS 438 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~ 438 (534)
=.+.+++.|.=+|...+..+|...++ ||.-.++..+.+.+|...|
T Consensus 151 R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 151 RFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred HHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 56778888899999999999988766 9998887777666554433
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.11 E-value=1.3e-05 Score=80.40 Aligned_cols=109 Identities=14% Similarity=0.228 Sum_probs=86.5
Q ss_pred ehhHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCc---chhhhh-hhhhh
Q psy14136 134 TVFGFSQLVTAICSLLIPQAAVLH-------YGALIALRSIQGIASGLTWPAMYALVGHWIPSNE---RSRFMS-SFQGF 202 (534)
Q Consensus 134 ~~l~~~~~~~~i~~~l~~~a~~~~-------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~---r~~~~~-~~~~~ 202 (534)
|+++++.++..+|.++..++..+. .+.++++-++.++|.|+.-|...++++|.+++++ |.+.+. .|.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567889999999998865553332 3578889999999999999999999999998763 455666 55899
Q ss_pred hhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhh
Q psy14136 203 SFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWF 242 (534)
Q Consensus 203 ~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~ 242 (534)
++|..++..+.+++-+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877776555443
No 256
>KOG2325|consensus
Probab=98.09 E-value=3.7e-05 Score=77.52 Aligned_cols=185 Identities=12% Similarity=0.055 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHh-hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhh-hcccchhHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFV-RNIMSLTNIRKVF 365 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~l~~~~~~~~~ 365 (534)
.+++..+..++.......+..-.-.|+++ ..+-+....|++.+...++..++++..|+...|.+. |+.+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl--------- 105 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL--------- 105 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH---------
Confidence 44555555555555555444445566665 245666778999999999999999999999999885 4432
Q ss_pred HHHHHHHHHHHHHHH---hhcCC-chhHHHHHHHHHHHHhhhcccccchhhhcc-CCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136 366 TAISQVIPALLVMLI---GYLGC-NVALVLITWFVAVTLITASYAGAMANVVDI-GPNFAGPILAFAQTIHMTASFLSPM 440 (534)
Q Consensus 366 ~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~g~~~~~~~~g~~i~~~ 440 (534)
+.+.++..++-++. ...+. ..++.++.-++.|++.+. ....-.++++. .+++|.++++.......+|.++||.
T Consensus 106 -i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 -IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred -HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 45555555444443 33343 233333333443333222 22334556653 4566888888888877778777777
Q ss_pred hhhhccccc--------ccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q psy14136 441 VAGYFLQDD--------ETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ 483 (534)
Q Consensus 441 ~~g~l~~~~--------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 483 (534)
+...+.... +....-|..+-|+++++.++.++...+..++..+
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 654443221 0112346777788888887777776665544443
No 257
>KOG1237|consensus
Probab=98.06 E-value=0.00038 Score=72.87 Aligned_cols=147 Identities=15% Similarity=0.195 Sum_probs=111.9
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHH-H----------------
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAV-L---------------- 156 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~-~---------------- 156 (534)
..++|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..+|..+..+... +
T Consensus 65 t~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c 144 (571)
T KOG1237|consen 65 TLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVC 144 (571)
T ss_pred HHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcc
Confidence 457888888888888888888889999999999986 8999999999999988665433210 0
Q ss_pred ------HHHHHHHHHHHHhhhhcchhhhHHHHHhcccC---CCcch---hhhh-hhhhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136 157 ------HYGALIALRSIQGIASGLTWPAMYALVGHWIP---SNERS---RFMS-SFQGFSFGIGLTYPLCGFLIAHYGWR 223 (534)
Q Consensus 157 ------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~---~~~r~---~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr 223 (534)
-...+..+.-+..+|.|..-|...++=+|-++ ++++. ..+. .+...++|..++..+..+.-+..||.
T Consensus 145 ~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~ 224 (571)
T KOG1237|consen 145 ESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWK 224 (571)
T ss_pred cCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccce
Confidence 12356667778888999999999999999998 32222 3444 33567888888888777777789999
Q ss_pred hhhhhhchhhHHHHHHhh
Q psy14136 224 SVFYTTGSLGAIWCVAWW 241 (534)
Q Consensus 224 ~~f~i~~~~~li~~i~~~ 241 (534)
+.|.+..+...++.++.+
T Consensus 225 lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 225 LGFGIPTVLNALAILIFL 242 (571)
T ss_pred eeccHHHHHHHHHHHHHH
Confidence 999988777666555443
No 258
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.06 E-value=6.6e-05 Score=79.99 Aligned_cols=168 Identities=14% Similarity=0.060 Sum_probs=117.7
Q ss_pred HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381 (534)
Q Consensus 303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (534)
++++...+..|+.+.+|++...+..+........-+..+++|+++|+ +|+++.+ .++.++..++..++.
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~lla 72 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALLS 72 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHH
Confidence 45566667778887789999888888888888888899999999997 4665542 344444444444443
Q ss_pred hcCC-------chhHHHHHHHHHHHHhhhcccccchhhhccCCC----chhHHHHHHhHHHHhhhhHHhHhhhhcccccc
Q psy14136 382 YLGC-------NVALVLITWFVAVTLITASYAGAMANVVDIGPN----FAGPILAFAQTIHMTASFLSPMVAGYFLQDDE 450 (534)
Q Consensus 382 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 450 (534)
.... .....++++.+...+.|..-+...+...+.+++ .+-..+.+.....++|+.+++.+.+++.+...
T Consensus 73 i~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~ 152 (654)
T TIGR00926 73 FGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG 152 (654)
T ss_pred hccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3211 112345566666777778788888888776542 26778888999999999999999998864300
Q ss_pred --cChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136 451 --TSLESWRQVFLIAGAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 451 --~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 480 (534)
....+|..+|.+.+++++++.+++...++.
T Consensus 153 ~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~ 184 (654)
T TIGR00926 153 CFGCQDCYPLAFGVPAILMILALIVFMAGSKM 184 (654)
T ss_pred ccccCcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 001369999999999988888776655443
No 259
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.05 E-value=2.5e-05 Score=66.85 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcc
Q psy14136 107 AILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHW 186 (534)
Q Consensus 107 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 186 (534)
.-.++......+..++.+.+.+++|.|+.+++|.+.+.+-.+. +. .++.+.++.+-++.|++.+..+.+...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~--~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS--FF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH--HH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 3345566666777788889999999999999999999876554 32 25788999999999999999999999999999
Q ss_pred cCCCcchhhhh-hhhhhhhHHHhhhhHHHHh
Q psy14136 187 IPSNERSRFMS-SFQGFSFGIGLTYPLCGFL 216 (534)
Q Consensus 187 ~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l 216 (534)
.++++|++-.+ .+.....+.++|.++.-.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 5577777877777665444
No 260
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.97 E-value=0.00076 Score=65.08 Aligned_cols=148 Identities=14% Similarity=0.022 Sum_probs=95.4
Q ss_pred hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q psy14136 317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFV 396 (534)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (534)
.+|++..+++.++....+...+...+.|.+.||+|||+.- ++..++.++..+.-. .+ +...+++.=++
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c----------l~~cily~~scl~k~-~~-~~~~L~~GRvl 130 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC----------LLFCILYSLSCLTKH-SS-NYPVLLLGRVL 130 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH----------HHHHHHHHHHHHHHh-cc-ccHHHHHHHHH
Confidence 4899999999999999999999999999999999998752 333334444443322 22 66677777777
Q ss_pred HHHHhhhcccccchhhh-c----cCCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHH
Q psy14136 397 AVTLITASYAGAMANVV-D----IGPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSC 469 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~-~----~~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~ 469 (534)
.+......+...-++.. | -+|++ .+...+..... ..+-++++..+.-.+.+. .+ .+...+|.....+.++
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~--~~-~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW--FG-FGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH--hC-CCCcchHHHHHHHHHH
Confidence 77777776666655443 2 24544 66666655533 333444555555555555 11 2346678888777777
Q ss_pred HHHHHHhhcC
Q psy14136 470 TYFFYQVLGT 479 (534)
Q Consensus 470 ~~~~~~~~~~ 479 (534)
+.++.....+
T Consensus 208 ~~~~I~~~W~ 217 (354)
T PF05631_consen 208 AAVLILKTWP 217 (354)
T ss_pred HHHHHHhccc
Confidence 7666554433
No 261
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.96 E-value=0.00024 Score=69.65 Aligned_cols=145 Identities=19% Similarity=0.147 Sum_probs=116.4
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhc-ccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ-RFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~ 172 (534)
.+-||++..|...+......|..++-...|++.. |.++|+.-.+++.+.+++..+..++ ...+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 6689999999999999999999999999998888 6788888888888888877665444 2236788999999999999
Q ss_pred cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh----------cCCchhhhhhchhhHHHHHH
Q psy14136 173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH----------YGWRSVFYTTGSLGAIWCVA 239 (534)
Q Consensus 173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~----------~gwr~~f~i~~~~~li~~i~ 239 (534)
|.+.....+.+.+...+++.|..+|.+ ....++..++..+++.+.+. .+|-.+|.+.+++.++++.+
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999965 66677777777777776543 23556676666655554443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.94 E-value=0.0011 Score=66.33 Aligned_cols=272 Identities=13% Similarity=0.085 Sum_probs=127.9
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-----hcCCc------------hhhhhhchh
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-----HYGWR------------SVFYTTGSL 232 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-----~~gwr------------~~f~i~~~~ 232 (534)
-.+.-..+.-.+.-....+++++.+...+ .+.+.|..++..+--.+-+ .+ +| .-..+.|.+
T Consensus 131 l~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky-~r~~p~~~glvtl~~yl~fwg~~ 209 (544)
T PF13000_consen 131 LCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKY-LRSTPSDEGLVTLSGYLKFWGWV 209 (544)
T ss_pred HHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHh-cccCCCCCCeeeHHHHHHHHHHH
Confidence 33444455555555566777777776654 4566666665443322221 11 11 112333455
Q ss_pred hHHHHHHhhhhccCCCCCCcccchh-----h--hhhhhhccCccc----cCCCCCccc---HHHhhcCHHHHHHHHHHHH
Q psy14136 233 GAIWCVAWWFLAFDAPLKHPRITRK-----E--LDYIQENIEPTI----VGSKGLKVP---WVSILTSPPAWAIGITTFG 298 (534)
Q Consensus 233 ~li~~i~~~~~~~~~p~~~~~~~~~-----~--~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 298 (534)
.++..+.+.++.+|.|+.....+.+ + .+....+..+++ ++....+.. ..+++|-|.+..+.+..+.
T Consensus 210 ~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~ 289 (544)
T PF13000_consen 210 FLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLT 289 (544)
T ss_pred HHHHHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 5555556666667765432111100 0 000000000000 000011122 2445677888777777777
Q ss_pred HHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcc-c-------ch------------
Q psy14136 299 RIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNI-M-------SL------------ 358 (534)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l-------~~------------ 358 (534)
.-.++..--.....=+.+ .|++.++.+.+. +..++..++.|+++.|+.+.+. + ..
T Consensus 290 ~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~ 364 (544)
T PF13000_consen 290 AKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLV 364 (544)
T ss_pred HHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhh
Confidence 776666555555555666 799988876554 5566666666666666643222 1 00
Q ss_pred ---hHHHHHHHHH-HHHHHHH-HHHHHhhcC--Cc--hhHHH---HHHHHHHHHhhhcccccchhhhccC-CCchhHHHH
Q psy14136 359 ---TNIRKVFTAI-SQVIPAL-LVMLIGYLG--CN--VALVL---ITWFVAVTLITASYAGAMANVVDIG-PNFAGPILA 425 (534)
Q Consensus 359 ---~~~~~~~~~~-~~~~~~~-~~~~~~~~~--~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g 425 (534)
+..+.|.-.. +=++.++ ...+....+ .. .+... ...++..+....-+....+.-+.+. |.--|+.|.
T Consensus 365 g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT 444 (544)
T PF13000_consen 365 GDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT 444 (544)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence 0011111111 1111111 111111111 11 11111 1112222222233333344444554 555999999
Q ss_pred HHhHHHHhhhhHHhHhhhhcccc
Q psy14136 426 FAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 426 ~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+.|++.++|+..-..+.=++.|.
T Consensus 445 LLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 445 LLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHhcCCCchHHHHHHHhhh
Confidence 99999999998766666556554
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.93 E-value=0.016 Score=59.63 Aligned_cols=248 Identities=11% Similarity=0.052 Sum_probs=140.8
Q ss_pred ChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-----------------------
Q psy14136 101 DTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL----------------------- 156 (534)
Q Consensus 101 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~----------------------- 156 (534)
+++.+..+=....+ ...+......++++|++|++++-+.+..+.....+.++..-|
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45666666664444 344556778999999999999887777766666655443111
Q ss_pred ------HHHHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh---------h
Q psy14136 157 ------HYGALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA---------H 219 (534)
Q Consensus 157 ------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~---------~ 219 (534)
+.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.|..+ +..+.++|.++++.+..++.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 112222333333333333333 46788999999999999999 557899999999988888877 1
Q ss_pred cCCchhhhh----hchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHH
Q psy14136 220 YGWRSVFYT----TGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGIT 295 (534)
Q Consensus 220 ~gwr~~f~i----~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (534)
..|...+.. ..+.+++...+. ..+.+...+.+...+++.+ +++++.+.....+.+.++++|.+..+++.
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~~-~~~~~~vl~~~~~~~~~~~------~kk~k~k~s~~es~k~l~kS~yL~~Ia~l 288 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILLY-RYMNKNVLTDPRFYPSAKK------KKKKKPKMSLKESFKLLLKSKYLLCIALL 288 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHccCccccchhhhc------ccccCCCccHHHHHHHHHhCHHHHHHHHH
Confidence 235433321 112222222222 2222211111111000000 00111112233456778899999888888
Q ss_pred HHHHHHHHHHHHhchhhhhHhhhCCcccc---chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 296 TFGRIWVHYIFIIPGPRYMKTILGFSIQT---NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
..+++.....+....-..+++.+.-+... .|-.....++..++..++++.+.+|+|-+..
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA 351 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 88887777766554445555533322221 2334455566666666777888888776644
No 264
>KOG2816|consensus
Probab=97.84 E-value=0.0006 Score=69.56 Aligned_cols=128 Identities=20% Similarity=0.280 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136 332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN 411 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
.++..++.+.+.|.++||+|||..+. ....+.++....+.... ++.++ ..-..++.+.......++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~-------~~~~~~~l~~~~~~~~~------~~~~~-~~~l~g~~~~~~s~~~a~ 136 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLL-------LPLFGTILPALCLLFQG------YWFFL-LLGLSGGFSAIFSVGFAY 136 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHH-------HHHHHHHHhHHHHHHHH------HHHhh-hcccccchhhhhhhhhhh
Confidence 36788899999999999999997642 11222233322222221 22222 223334455667777888
Q ss_pred hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
+.+...++ |....|+.+.....+..++|.+.+.+... .++..+|.+..+..++..+..+...
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-----~~~a~~f~ia~~~~~~~~~y~~~~l 199 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-----LGIALVFLIAAASGILSLLYMLLFL 199 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHHHhhcc
Confidence 88887755 99999999999999999999999999998 8899999998888887776655543
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.80 E-value=0.032 Score=56.08 Aligned_cols=246 Identities=11% Similarity=-0.026 Sum_probs=140.1
Q ss_pred ChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-------H----------H----
Q psy14136 101 DTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-------H----------Y---- 158 (534)
Q Consensus 101 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-------~----------~---- 158 (534)
+++.+.++-+..-+ +..+..++.+++.+++.|++++-+-+..+....+++++...| + .
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 46677888888888 677888999999999999999988888888888887664321 1 0
Q ss_pred ---------HHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhc-C-----
Q psy14136 159 ---------GALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-G----- 221 (534)
Q Consensus 159 ---------~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-g----- 221 (534)
|...+.-+..-+-.+.... .-.....|.+..+|-.|..+ +..+.+++..++..+..++.++. .
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~ 218 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEF 218 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHH
Confidence 2222222223333233333 55667888888889899999 44788888888888887777631 1
Q ss_pred ----CchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136 222 ----WRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF 297 (534)
Q Consensus 222 ----wr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (534)
-+..+.+.++.++++..+..+.-+...+++....+..++ ++.+..+.....+.+.+.++|.++.+.+...
T Consensus 219 ~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~k------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl 292 (509)
T COG3202 219 KDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKK------KKKKKLKLGLIESFKMILRSKYLGAIALLVL 292 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcc------cccccccCcHHHHHHHHHhhhHHHHHHHHHH
Confidence 233444444444444444333322222222111000000 0000011222335677888899988888888
Q ss_pred HHHHHHHHHHhchhhhhHhhhCCccccchh---HhhhHHHH-HHHHHHHHHHHHHHHhh
Q psy14136 298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGL---LTGAPFLC-SYLSSVLFCYLADQLFV 352 (534)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~---~~~~~~~~-~~~~~~~~g~l~dr~~~ 352 (534)
+++.+...+-..--.-.++.+.......++ +....++. .++...+++.+.+|.|-
T Consensus 293 ~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 293 AYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 888777766432222223223222222222 23333443 44455566666666654
No 266
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.78 E-value=0.0011 Score=65.74 Aligned_cols=163 Identities=10% Similarity=0.021 Sum_probs=104.4
Q ss_pred HHhchhhhhHhh-hCCccccchhHhhh-HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 306 FIIPGPRYMKTI-LGFSIQTNGLLTGA-PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL 383 (534)
Q Consensus 306 ~~~~~~~~l~~~-~g~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (534)
.-.++..|+.+. .|++..+..--..+ ..-..++..+....+.|.++.|.. ++++.+...+...++.+.
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv----------iil~~~~~i~t~~lll~~ 91 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV----------IILQALSYIITWLLLLFG 91 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH----------HHHHHHHHHHHHHHHHHH
Confidence 345677788776 78887765533333 333566667777889999998865 345555545555555555
Q ss_pred CCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136 384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI 462 (534)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~ 462 (534)
+ +....-+.-++.+...+. -...++++-...| ++--++.+......-+|.+++..++-.+... .+ .+|....++
T Consensus 92 ~-sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~--~~-~sy~~L~~i 166 (412)
T PF01770_consen 92 T-SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF--GG-VSYFQLNYI 166 (412)
T ss_pred C-cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cC-CCHHHHHHH
Confidence 4 555555555555544433 3334455544444 4566778888888777777777777666654 11 678888888
Q ss_pred HHHHHHHHHHHHHhhcCCccc
Q psy14136 463 AGAVGSCTYFFYQVLGTSEVQ 483 (534)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~ 483 (534)
......++.+..+++++.++.
T Consensus 167 sl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 167 SLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred HHHHHHHHHHHHHHcCCCCcc
Confidence 888788888888888776553
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.68 E-value=0.00015 Score=54.01 Aligned_cols=63 Identities=25% Similarity=0.292 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 292 IGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
+-...++...+...+..++|.|+++ .|+++.++|.+.++..+..+++.++.|+++||.++++.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 4456677777888889999999998 89999999999999999999999999999999999875
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.66 E-value=0.0013 Score=60.42 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=54.7
Q ss_pred Ccchhhhhhh-hhhhhHHHhhhhHHHHh---hh--hcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhh
Q psy14136 190 NERSRFMSSF-QGFSFGIGLTYPLCGFL---IA--HYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQ 263 (534)
Q Consensus 190 ~~r~~~~~~~-~~~~~G~~~g~~l~~~l---~~--~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~ 263 (534)
|+|+....+. .+.++|.++.-..--.- .+ .-+|++.+.+.+++.++.+++..++-.+-....+. ++++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence 4566655555 47788877554332111 11 13599999999888877766655553221111111 011110
Q ss_pred hccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHH
Q psy14136 264 ENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGR 299 (534)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (534)
......+...++.+|++..|...+.+...
T Consensus 78 -------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 78 -------NSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred -------cccccccchHHHHHccchHHHHHHHHHHH
Confidence 01123346788999999999877665543
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.65 E-value=4.2e-05 Score=56.91 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=48.1
Q ss_pred CCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHH
Q psy14136 89 KPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVT 143 (534)
Q Consensus 89 ~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 143 (534)
.|-++. -++.|+|+.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 20 ~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 20 YPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 466666 6679999999999999999999999999999999999999887765543
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.63 E-value=0.00039 Score=71.04 Aligned_cols=160 Identities=21% Similarity=0.232 Sum_probs=107.1
Q ss_pred hhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC---c
Q psy14136 310 GPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC---N 386 (534)
Q Consensus 310 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 386 (534)
...|+++.+|+++.+...+.....+.- ...++.|.++|-+.-.... |++.++++.++..+....+...+. +
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~r-----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYR-----RKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCc-----chHHHHHHHHHHHHHHHHHHhcccccch
Confidence 345677789999988776655544433 4567889999987421111 344566777666555554444432 3
Q ss_pred hhHHHHHHHHHHHHhhhcccccchhhhccC---CCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136 387 VALVLITWFVAVTLITASYAGAMANVVDIG---PNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA 463 (534)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~ 463 (534)
.....+.+++..++....-........|.. |+.+|...+.......+|+.++..+.|.+.+. .+++..|.+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-----~~~~~~f~i~ 160 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-----FGPQGVFLIS 160 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----CCCeEEehHH
Confidence 344445555555666666666666666654 33378888999999999999999999999998 6778888888
Q ss_pred HHHHHHHHHHHHhhcCC
Q psy14136 464 GAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 464 ~~~~~~~~~~~~~~~~~ 480 (534)
+++..+..+..+++.++
T Consensus 161 ~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 161 AALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 77777666665555554
No 271
>KOG3880|consensus
Probab=97.48 E-value=0.0036 Score=58.52 Aligned_cols=318 Identities=16% Similarity=0.108 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHh
Q psy14136 105 QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184 (534)
Q Consensus 105 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 184 (534)
.|.+.-+-.+...+..+....+.||+---.=..+..++.+.+.++.+++ ++.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 4555556666666777777788888754444455566666776774444 67888888888888888876555554443
Q ss_pred cccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhh
Q psy14136 185 HWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDY 261 (534)
Q Consensus 185 ~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~ 261 (534)
. +++ ...+ +.++.+.++++|..--..+.+. ++-|...++...+.++.+...++.+++++.... ...++..+
T Consensus 142 ~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~-ptl~~~~~ 215 (409)
T KOG3880|consen 142 R-YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS-PTLQPSTE 215 (409)
T ss_pred c-CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC-CCcCccce
Confidence 3 322 2333 4456666666776555555553 456777888777777766666666655433221 11111111
Q ss_pred hh-hccCc---cccC-CCCCcccHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhchhhhhHh--hhCCcc---ccchhHhh
Q psy14136 262 IQ-ENIEP---TIVG-SKGLKVPWVSILT-SPPAWAIGITTFGRIWVHYIFIIPGPRYMKT--ILGFSI---QTNGLLTG 330 (534)
Q Consensus 262 ~~-~~~~~---~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~g~s~---~~~~~~~~ 330 (534)
.. +.... .+.+ ........++-++ -+++...++-.+.+++..|.++.-+...+.- ..|.+. .|.-++..
T Consensus 216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqv 295 (409)
T KOG3880|consen 216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQV 295 (409)
T ss_pred eccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhe
Confidence 11 10000 0001 0111222233222 2333335555555555655554332222110 123332 23445555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH---HHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL---LVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
...++..+.+=-. |+-+ .+. .+.+.+.-.+-.+ .-..+.+.+ +.+...+.++.=+...|..+..
T Consensus 296 lYQlGVFiSRSS~-----~~~~-----~p~--l~~LailQ~vNl~ff~~~a~~~ftp-si~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 296 LYQLGVFISRSSI-----NLFT-----MPY--LWLLAILQFVNLLFFLLQAWYWFTP-SIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred eeeeeEEEEeccc-----eEEe-----chH--HHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHhhcCchHHHH
Confidence 5555444432111 1111 010 0111111111111 112233333 5565555555555555555544
Q ss_pred cc-hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136 408 AM-ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAG 443 (534)
Q Consensus 408 ~~-~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g 443 (534)
.+ ....|..|++|--+++.....-.+|..++..+.-
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 44 4445677888999999988887777777766653
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.47 E-value=0.0082 Score=60.61 Aligned_cols=181 Identities=14% Similarity=0.155 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~ 366 (534)
+..+.+....++..+..-...+-.|.++.+.+.-+..-.+.....-.+..++.+...|.+.||..|.+..+.... ..
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~---~Q 78 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV---VQ 78 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH---HH
Confidence 345667788888888888888889999998776666556666666778888888999999999988876533221 12
Q ss_pred HHHHHHHHHHHHHHhhcCCc----hhHHHHHH--HHHHHHhhhcccccchh------hhccC---CCchhHHHHHHhHHH
Q psy14136 367 AISQVIPALLVMLIGYLGCN----VALVLITW--FVAVTLITASYAGAMAN------VVDIG---PNFAGPILAFAQTIH 431 (534)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~---p~~~g~~~g~~~~~~ 431 (534)
-++..+.++.++........ .+.....+ ........-........ +..+. |+.....++...-+=
T Consensus 79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRID 158 (432)
T PF06963_consen 79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRID 158 (432)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHH
Confidence 22223333333322222211 11111111 11111111111111111 11122 222666666666666
Q ss_pred HhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 432 MTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 432 ~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
.+...++|.+.|.+.+. .++.....+.++..+++..+=+
T Consensus 159 L~ckllaPl~vG~l~t~-----~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 159 LFCKLLAPLFVGLLMTF-----ASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999997 6788888888888877777633
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.37 E-value=0.013 Score=59.79 Aligned_cols=56 Identities=9% Similarity=-0.149 Sum_probs=37.4
Q ss_pred chhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHh
Q psy14136 386 NVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
+.+..++..++.++..|......+.+..+..+ ++|..+..+....-.+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666777778888777777776666544 447777776666666666666654
No 274
>KOG2563|consensus
Probab=97.28 E-value=0.0051 Score=60.89 Aligned_cols=149 Identities=11% Similarity=0.056 Sum_probs=87.5
Q ss_pred hhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh--c---CCc
Q psy14136 312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY--L---GCN 386 (534)
Q Consensus 312 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~ 386 (534)
.|..+.+| +...+-++..++.+..++..+.+-|+.||+|-|..+ .++..+..++..+=.. . +..
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~----------llgt~ln~iGa~Ir~iss~p~v~~~ 137 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL----------LLGTVLNGIGAWIRLISSLPFVPPL 137 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH----------HHHHHHHHHHHHHhhhccCcccccc
Confidence 35556677 666677888888999999999999999999998653 3444444433332111 1 122
Q ss_pred hh--HHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhccccc-ccChhhHHH--HH
Q psy14136 387 VA--LVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDD-ETSLESWRQ--VF 460 (534)
Q Consensus 387 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-~~~~~~~~~--~f 460 (534)
.+ .....-.+.....-+......-.....+| ++|+++..+..+...+|.+++.++.+.+...+ ......|.. .|
T Consensus 138 f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f 217 (480)
T KOG2563|consen 138 FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLF 217 (480)
T ss_pred chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHH
Confidence 23 22233333322222222222223333455 55999999999999999999988888887762 111134444 34
Q ss_pred HHHHHHHHHHH
Q psy14136 461 LIAGAVGSCTY 471 (534)
Q Consensus 461 ~~~~~~~~~~~ 471 (534)
+...++..+.+
T Consensus 218 ~~~~~l~~l~l 228 (480)
T KOG2563|consen 218 LGVECLAALLL 228 (480)
T ss_pred HHHHHHHHHHH
Confidence 44444444444
No 275
>KOG1479|consensus
Probab=97.27 E-value=0.0065 Score=59.83 Aligned_cols=59 Identities=2% Similarity=-0.196 Sum_probs=35.6
Q ss_pred chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136 386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGY 444 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~ 444 (534)
+.++.+....+.++..|-..+..+.+..+..|++...+.|....+...++.....+.++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 55667777777788888777777777777666554444444444444444443333333
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.21 E-value=0.0054 Score=64.01 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=84.9
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHH--H-HHHHHHH--HH-HHHHHHHHHHHHhh
Q psy14136 97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAIC--S-LLIPQAA--VL-HYGALIALRSIQGI 170 (534)
Q Consensus 97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~--~-~l~~~a~--~~-~~~~l~~~r~l~G~ 170 (534)
-+|-+..+.+.+.+++.+|.++|+.+++++.++.-++ ...+-+.+..++ + .+..... .. ....++..-++.|+
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788899999999999999999998887432222 222221111111 1 1110111 00 11223444566788
Q ss_pred hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh-hhcCCchhhhhhchhhHHHHH
Q psy14136 171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI-AHYGWRSVFYTTGSLGAIWCV 238 (534)
Q Consensus 171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~i~~~~~li~~i 238 (534)
..|+..|....+..+.. .++-++..| ++....+|+++|.++.+++. ..+|-....++.+.+.+++.+
T Consensus 123 l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 123 LIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 88888888888776543 223466677 88999999999999887765 456755444444444444443
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.19 E-value=5.5e-05 Score=79.03 Aligned_cols=174 Identities=11% Similarity=0.146 Sum_probs=1.3
Q ss_pred HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136 301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI 380 (534)
Q Consensus 301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (534)
....++..-.-.-++++++++..+.|++.+..-++.++..++..++.+|.+|.|.+ .++.++.+++.+++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi----------g~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI----------GIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee----------eecHHHHHHHHHHH
Confidence 44444444344455667999999999999999999999999999999887665543 44555554444433
Q ss_pred hhcC------------------------C---------------------c----hhHHHHHHHHHHHHhhhcccccchh
Q psy14136 381 GYLG------------------------C---------------------N----VALVLITWFVAVTLITASYAGAMAN 411 (534)
Q Consensus 381 ~~~~------------------------~---------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
...+ . . ....++..++.+.+....++...++
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 2210 0 0 0122223333344444555556677
Q ss_pred hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc----ccC-------------hhhHHHHHHHHHHHHHHHHHH
Q psy14136 412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD----ETS-------------LESWRQVFLIAGAVGSCTYFF 473 (534)
Q Consensus 412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~----~~~-------------~~~~~~~f~~~~~~~~~~~~~ 473 (534)
+-|..+++ .+...|+......+|-++|=.+++.+.+.+ ... .+.|...|++.+.+.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766554 888888888888887777767766665321 000 123556677777777777777
Q ss_pred HHhhcCCcccc
Q psy14136 474 YQVLGTSEVQP 484 (534)
Q Consensus 474 ~~~~~~~~~~~ 484 (534)
++.++|+.++.
T Consensus 246 l~~FPk~lp~~ 256 (539)
T PF03137_consen 246 LFFFPKKLPGT 256 (539)
T ss_dssp -----------
T ss_pred HHcCCccCCCc
Confidence 78888776554
No 278
>PRK03612 spermidine synthase; Provisional
Probab=97.01 E-value=0.018 Score=60.18 Aligned_cols=143 Identities=13% Similarity=0.085 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH---
Q psy14136 298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA--- 374 (534)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--- 374 (534)
+..++...+-......+...+|.+....+.+.+.+..+..+|+.+++++.++..++... ..+.++.+...
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-------~e~~i~l~~~~~~~ 97 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-------VELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-------HHHHHHHHHHHHHH
Confidence 33444444444444555555788888888888888888888888877765332222110 00111111111
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136 375 LLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQ 447 (534)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 447 (534)
+......+............++.++..|+..|...-...+...++.|...|-......+|+++|+++.+++.-
T Consensus 98 ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 98 ILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 1111111111011122233344456666666665555444333346677788888889999999998888765
No 279
>KOG3626|consensus
Probab=96.99 E-value=0.0091 Score=63.33 Aligned_cols=171 Identities=12% Similarity=0.096 Sum_probs=113.3
Q ss_pred HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-
Q psy14136 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL- 383 (534)
Q Consensus 305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 383 (534)
++....-.-++++++++..+.|++.+..-++..+..+...+...|..|.+.+ .++.++.+++.++..+.
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I----------g~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI----------GIGLVLMGLGSLLFALPH 183 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee----------eechhHHHHHHHHHhChH
Confidence 5554455556778999999999999999999999999999999998887764 34444444444333211
Q ss_pred -------------------C---------------------------Cc---h-hHHHHHHHHHHHHhhhcccccchhhh
Q psy14136 384 -------------------G---------------------------CN---V-ALVLITWFVAVTLITASYAGAMANVV 413 (534)
Q Consensus 384 -------------------~---------------------------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
+ .+ . .++++..++.+.+....++...+++-
T Consensus 184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD 263 (735)
T KOG3626|consen 184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID 263 (735)
T ss_pred HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence 0 00 0 12223333444444455666667777
Q ss_pred ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc------------cC--hhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE------------TS--LESWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------------~~--~~~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
|...++ .....|+...+..+|=++|=.+++.+...+. +. .+.|...|++.+.+.++..+.+++++
T Consensus 264 Dnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP 343 (735)
T KOG3626|consen 264 DNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP 343 (735)
T ss_pred ccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 766544 8888999888888877777666666543210 00 13566778888888888888888888
Q ss_pred CCccccC
Q psy14136 479 TSEVQPW 485 (534)
Q Consensus 479 ~~~~~~~ 485 (534)
+..+++.
T Consensus 344 k~lp~~~ 350 (735)
T KOG3626|consen 344 KELPKSQ 350 (735)
T ss_pred ccCcccc
Confidence 8766543
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.85 E-value=0.069 Score=54.71 Aligned_cols=150 Identities=11% Similarity=0.006 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc-----cccchhHhhhHHHHHHHH-HHHHHHHHHHHhhhcccchhH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS-----IQTNGLLTGAPFLCSYLS-SVLFCYLADQLFVRNIMSLTN 360 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~l~~~~ 360 (534)
|+++...+..++..+.++.+ .-++|..+.+ .+...++-+...+...+. .++.+++++|++|++.+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~- 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTV- 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHH-
Confidence 45666666666666555543 3345555552 345555555554544444 78889999999999875211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC-------------------------chhHHHHHHHHHHHHhhhccc-ccchhhhc
Q psy14136 361 IRKVFTAISQVIPALLVMLIGYLGC-------------------------NVALVLITWFVAVTLITASYA-GAMANVVD 414 (534)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 414 (534)
.............++....+. +.|...+..+..-.......+ ..+..++|
T Consensus 81 ----~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 81 ----ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred ----HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001111111111111111110 112222333333444444444 67788899
Q ss_pred cCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 415 IGPN-FAGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 415 ~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
+... +..+-.++.....++|..+++.+..++.
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8864 4889999999999999999999888876
No 281
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.58 E-value=0.059 Score=46.23 Aligned_cols=106 Identities=7% Similarity=-0.055 Sum_probs=77.5
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136 328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407 (534)
Q Consensus 328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (534)
-.++......+..++.+.+.+++|.|+.+ +++.+...+..... ...+.+.++....+.+++.+..+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm----------~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSM----------ILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHH----------HHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHh
Confidence 35566677788888999999999998653 45554444333332 2226677778888888888988888
Q ss_pred cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136 408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l 445 (534)
...++.+...++ +++-.|+.-.+...+..+|..+.-.+
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766 99999998888888877777665443
No 282
>KOG0637|consensus
Probab=96.48 E-value=0.014 Score=57.90 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH----hhhcccchhHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL----FVRNIMSLTNIR 362 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~l~~~~~~ 362 (534)
+....+....+...+++..-..++|+|+++ .|.+..-.+.+....-+.+++..++.|..+||. ||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP------- 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP------- 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc-------
Confidence 445566666677778888888999999998 799999999888888899999999999999974 55554
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC----------c------hhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhH-HH
Q psy14136 363 KVFTAISQVIPALLVMLIGYLGC----------N------VALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGP-IL 424 (534)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~-~~ 424 (534)
++..+.....+.+.++++... . ....++.+-+.=+..-......-++..|+.. +++-+ +.
T Consensus 104 --fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~An 181 (498)
T KOG0637|consen 104 --FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRAN 181 (498)
T ss_pred --hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccc
Confidence 455666666666666655421 0 0111222222223333555666677777653 44444 88
Q ss_pred HHHhHHHHhhhhHHhHhhhh
Q psy14136 425 AFAQTIHMTASFLSPMVAGY 444 (534)
Q Consensus 425 g~~~~~~~~g~~i~~~~~g~ 444 (534)
+....+..+|+.+|-.+.++
T Consensus 182 s~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 182 SVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred hhHHHHHHhcceeeeecccc
Confidence 88888888999888766654
No 283
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.32 E-value=0.072 Score=50.88 Aligned_cols=148 Identities=26% Similarity=0.262 Sum_probs=91.9
Q ss_pred HhchhhhhHhhhCCcc--ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 307 IIPGPRYMKTILGFSI--QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG 384 (534)
Q Consensus 307 ~~~~~~~l~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (534)
....+.+..+ .+.+. ...++......+...++.++.|++.||.|||+.+ ..+............+..
T Consensus 22 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 22 SPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHHHHhCc
Confidence 3344555554 34443 3677888888888888889999999999887432 222221222223333333
Q ss_pred C-chhHHHHHHHHHHHHhhhcccccchhhhccCCC--chhHHHHHHhH-HHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136 385 C-NVALVLITWFVAVTLITASYAGAMANVVDIGPN--FAGPILAFAQT-IHMTASFLSPMVAGYFLQDDETSLESWRQVF 460 (534)
Q Consensus 385 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f 460 (534)
. ............+.+.+...+....+..+..|+ +++...+.... ...++..++|.+.+.+... ...+|+..|
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 167 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRAAF 167 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHH
Confidence 1 244444444445566666777778888888886 58888888888 5677778888666655543 115777755
Q ss_pred HHHHHHHH
Q psy14136 461 LIAGAVGS 468 (534)
Q Consensus 461 ~~~~~~~~ 468 (534)
........
T Consensus 168 ~~~~~~~~ 175 (338)
T COG0477 168 LLAALLGL 175 (338)
T ss_pred HHHHHHHH
Confidence 55554443
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.03 E-value=0.021 Score=42.94 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=56.5
Q ss_pred HHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q psy14136 300 IWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML 379 (534)
Q Consensus 300 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 379 (534)
..+-+.+...+|...++ .++|..+.+++.+...++.++|.+...++.++.++++. ...+.+...+....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~----------~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL----------LRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHHHHHHHHHHHHH
Confidence 34455666778877776 89999999999999999999999999998887555543 34666666666666
Q ss_pred HhhcC
Q psy14136 380 IGYLG 384 (534)
Q Consensus 380 ~~~~~ 384 (534)
+.+.+
T Consensus 74 ma~~~ 78 (85)
T PF06779_consen 74 MALTH 78 (85)
T ss_pred HHHHh
Confidence 66665
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.99 E-value=0.1 Score=52.07 Aligned_cols=168 Identities=12% Similarity=0.007 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhC------C-----------------ccccchhHhhhHHHHHHHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILG------F-----------------SIQTNGLLTGAPFLCSYLSSVLFCYLA 347 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~-----------------s~~~~~~~~~~~~~~~~~~~~~~g~l~ 347 (534)
..++...+.+..+..+..-.-..+.+..+ . +....+.+...-.+-.++..+.+.++.
T Consensus 4 ~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi 83 (402)
T PF02487_consen 4 AFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFI 83 (402)
T ss_pred HHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhh
Confidence 34455566666666666655555552111 0 011123345555567777778888888
Q ss_pred HHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHH
Q psy14136 348 DQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFA 427 (534)
Q Consensus 348 dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~ 427 (534)
+|+..+.. ...+.++..+++++..+.+ +.+.-++..++..+..+..-.....+.. .+++. ..+..
T Consensus 84 ~~v~y~~R----------i~~~~~l~~~g~l~va~~~-~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~---~l~~w 148 (402)
T PF02487_consen 84 HRVPYWIR----------ILICVALSAAGMLLVAFSP-SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKS---SLSAW 148 (402)
T ss_pred hhccchHH----------HHHHHHHHHHHHhheeecc-chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCcc---ccccc
Confidence 88754321 2344455556666666655 6666677777777766665555555443 44442 22223
Q ss_pred hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 428 QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 428 ~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
......++.+|+...-.+.+. + .+.+..++....+.++-.+.+++.
T Consensus 149 ssGTG~aGl~Ga~~y~~lT~~-g---~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 149 SSGTGGAGLVGALYYLGLTTL-G---LSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred cCCcChhhHHHHHHHHHHHHh-C---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 333334555555554333332 1 456667777666655444444433
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.15 E-value=0.18 Score=50.55 Aligned_cols=88 Identities=13% Similarity=-0.000 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHHhhhcccccchhhhccCCCc----hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136 388 ALVLITWFVAVTLITASYAGAMANVVDIGPNF----AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA 463 (534)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~ 463 (534)
...++.+.+...+.|..=+.......|.++++ +.+.+.+.....++|..+++.+.+++.+. .+|...|.+.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~-----~~~~~~f~i~ 108 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQN-----YGWFLGFGIP 108 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-----S-HHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccc-----cchhhhhhHH
Confidence 46677777778888888888888888765432 77888899999999999999999999988 8999999999
Q ss_pred HHHHHHHHHHHHhhcCC
Q psy14136 464 GAVGSCTYFFYQVLGTS 480 (534)
Q Consensus 464 ~~~~~~~~~~~~~~~~~ 480 (534)
++.++++.+.++.-++.
T Consensus 109 ~~~~~~~~~~f~~~~~~ 125 (372)
T PF00854_consen 109 AIGMLLALIVFLSGRKR 125 (372)
T ss_dssp HHHHHHHHHHHHCCCCT
T ss_pred HHHHHHHHHHHHhCCcC
Confidence 99988887766654443
No 287
>KOG1479|consensus
Probab=94.72 E-value=2 Score=42.82 Aligned_cols=184 Identities=13% Similarity=0.088 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367 (534)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~ 367 (534)
.++..++..+........+.+-.+.|.++..+.+. ...+.....+...+..++.-.+--|...|...+ .+-....
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~---~~~~l~~ 93 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR---VGYLLSL 93 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 34555566666666777777766666555434443 344444445555555555444444444331110 0101111
Q ss_pred HHHHHHHHHHHHHhhcCC----chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 368 ISQVIPALLVMLIGYLGC----NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
...++..+..+....... .....+......+++.+......+....+..++. ++...| .+..+.+.+ +.-.+.
T Consensus 94 ~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G-~a~aG~l~S-l~~i~t 171 (406)
T KOG1479|consen 94 IAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSG-QALAGTLTS-LLRILT 171 (406)
T ss_pred HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhc-chhHhHHHH-HHHHHH
Confidence 111111111111111111 1223333344445555566666666666666666 444333 222222222 222233
Q ss_pred hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136 443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE 481 (534)
Q Consensus 443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 481 (534)
....+. .. .+-..-|.+..++.+++.+++..+++.+
T Consensus 172 ka~~~~--~~-~sA~~yF~~s~~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 172 KAAFSD--SR-TSALIYFITSTVILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHhcCC--CC-ceeehhHHHHHHHHHHHHHHHHHhhcch
Confidence 333333 11 2333446666666677777777555543
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.14 E-value=1.2 Score=45.43 Aligned_cols=31 Identities=0% Similarity=-0.071 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhhhcccccchhhhccCCCc
Q psy14136 389 LVLITWFVAVTLITASYAGAMANVVDIGPNF 419 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 419 (534)
..+...++.+++.+...+....+.....|+.
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~~gla~~fp~~~ 138 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSLFGLAGVFPSTY 138 (437)
T ss_pred HHHHHHHHHHhhhhhhcccchhhcccCCHHH
Confidence 3344444555566666666666666555444
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.86 E-value=0.63 Score=47.29 Aligned_cols=66 Identities=8% Similarity=-0.066 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHh-hhCCccccchhHhh---hHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQTNGLLTG---APFLCSYLSSVLFCYLADQLFVRNIM 356 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~~~~~~l 356 (534)
++.+.++++.........-+|..+++ ..+.+-.+.+.+.. ++.+=-+=+.++=....+|+||||..
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSW 73 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSW 73 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchh
Confidence 44455555555544444567877776 13555555444322 22333333444445777889999875
No 290
>KOG3574|consensus
Probab=93.74 E-value=1.2 Score=43.56 Aligned_cols=183 Identities=12% Similarity=0.077 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH-----HHhhhcccchhHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD-----QLFVRNIMSLTNI 361 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~l~~~~~ 361 (534)
+.+..+.+.+..+........ .+|.+++. .|.|-.+.+....... -..-.++...+.| |+||||...
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWv---- 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWV---- 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhcccccee----
Confidence 455566666666655544444 78888885 6777766555443322 1222344455555 999998753
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC----------chhHHHHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHH
Q psy14136 362 RKVFTAISQVIPALLVMLIGYLGC----------NVALVLITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTI 430 (534)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~ 430 (534)
.-+..+.+..+..+..... +.......+++..+..+.--.....+... +.|++.|-++......
T Consensus 103 -----vp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 103 -----VPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred -----eehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 2233333333333333211 11111112222222222222222233333 3456566666655555
Q ss_pred HHhhhhHHhHhhhhcccc-----------cccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136 431 HMTASFLSPMVAGYFLQD-----------DETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482 (534)
Q Consensus 431 ~~~g~~i~~~~~g~l~~~-----------~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 482 (534)
...|.+++..+.-.+... .+.+........++.+.+.+++..+..+..+++.
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 666666665554333221 0011123344455566666666655555554433
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.18 E-value=0.022 Score=55.47 Aligned_cols=113 Identities=12% Similarity=-0.065 Sum_probs=2.7
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHHHHHHHHHHHHH-H--HHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVFTAISQVIPALL-V--MLIGYLGCNVALVLITWFVAVTLIT 402 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (534)
.+...+.++..+|+.+.++..-+. .+|.+......|..+. ..++++-.- - ..-.... +.++.++..++.++..|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fi-Plf~~cn~~p~~~~~~~~~~-~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFI-PLFLLCNVQPRPRYLPVLFN-SDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHH-HHHHHHHhhcccccCCCccc-chHHHHHHHHHHHHccc
Confidence 345678899999999888643221 2333221111221110 000000000 0 0001112 34555666667777777
Q ss_pred hcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHh
Q psy14136 403 ASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMV 441 (534)
Q Consensus 403 ~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~ 441 (534)
......+.+..+..+ ++|..+-.+....-.+|-.+|..+
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---HHHH---------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666666544 446666666666666666666554
No 292
>KOG3097|consensus
Probab=92.96 E-value=0.93 Score=43.37 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=50.9
Q ss_pred hhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136 119 SQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP 188 (534)
Q Consensus 119 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 188 (534)
..++.+.+..++|-|+++.++...+...-.. -.-+.+..++-.....|++.+..+..--+++++...
T Consensus 74 s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~---Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 74 SSMFMPLLIRFLGTKWTMVLAVFPYALYIAA---NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh---hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3333448899999999999988887764332 122578889999999999999999887777776653
No 293
>KOG1237|consensus
Probab=90.80 E-value=3.9 Score=43.36 Aligned_cols=172 Identities=14% Similarity=0.044 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHHHHHH
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVFTAIS 369 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~ 369 (534)
..+..-.+...+++++...+-.|+...++.+...+.-.............+++++++|-+ ||.+.. .++
T Consensus 41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI----------~~~ 110 (571)
T KOG1237|consen 41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI----------NIG 110 (571)
T ss_pred HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH----------HHH
Confidence 344444555666767777778888888888887777777777777888888999999975 554432 222
Q ss_pred HHHHHHHHHHHh-------hcC-----------Cc-h-----hHHHHHHHHHHHHhhhcccccchhhhccCC----Cc--
Q psy14136 370 QVIPALLVMLIG-------YLG-----------CN-V-----ALVLITWFVAVTLITASYAGAMANVVDIGP----NF-- 419 (534)
Q Consensus 370 ~~~~~~~~~~~~-------~~~-----------~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~-- 419 (534)
.++..+++.++. ..+ +. . ..+...+.....+.+..-+.....-.|-++ +.
T Consensus 111 s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~ 190 (571)
T KOG1237|consen 111 SLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence 222222221111 111 00 0 122222333333455555566666665444 22
Q ss_pred -hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136 420 -AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL 477 (534)
Q Consensus 420 -~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 477 (534)
...-+.......++|..++..+.-++.+. .+|...|.+..++.+++.++++..
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~-----~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDN-----VGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhc-----ccceeeccHHHHHHHHHHHHHHcC
Confidence 34778888888899999999998888888 899999999888888877776654
No 294
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=89.88 E-value=3.3 Score=41.68 Aligned_cols=19 Identities=16% Similarity=0.326 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy14136 332 PFLCSYLSSVLFCYLADQL 350 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~ 350 (534)
..+..++..+..|++..|.
T Consensus 4 ~~i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 4 SAILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3455666667777777765
No 295
>KOG4830|consensus
Probab=89.44 E-value=0.32 Score=44.68 Aligned_cols=65 Identities=15% Similarity=0.114 Sum_probs=45.8
Q ss_pred cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHH
Q psy14136 279 PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLF 343 (534)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 343 (534)
.|..-|++-.+....+.+.+.-.....-..|+|.|..+.+.++.+.-+++-.+..+.....+.+.
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~ 257 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN 257 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence 45556777778888888888777777778899999888777776666665555555555555443
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=88.12 E-value=3.8 Score=38.15 Aligned_cols=25 Identities=20% Similarity=-0.033 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHhchhhhhHhh
Q psy14136 293 GITTFGRIWVHYIFIIPGPRYMKTI 317 (534)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~ 317 (534)
.+.........++.+..=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3444445556677776666777764
No 297
>KOG3098|consensus
Probab=87.98 E-value=10 Score=38.86 Aligned_cols=106 Identities=8% Similarity=-0.025 Sum_probs=80.3
Q ss_pred chhH-hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhh
Q psy14136 325 NGLL-TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITA 403 (534)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (534)
+|+. .++......+.+++.+.+.|+++.|.. ++++........+.+.+ .+.+..+....+.|++.+.
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~----------lv~ga~~y~~f~~gfl~--~N~y~~yfssallG~Gaal 118 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWA----------LVIGATCYAAFPLGFLF--PNSYYLYFSSALLGFGAAL 118 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHH----------HHHHhHHHHHHHHHHHh--cchHHHHHHHHHhhhhHHh
Confidence 4444 677778888999999999999999854 35555555444444433 3677888888888999999
Q ss_pred cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136 404 SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA 442 (534)
Q Consensus 404 ~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~ 442 (534)
.+.....+..+...++ ..+..++.-.+...+.++|..+.
T Consensus 119 lw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 119 LWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred eecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 9999999999988766 88888888888877777765544
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=85.63 E-value=8.2 Score=37.45 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=68.6
Q ss_pred ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHH----HHH-HHH--HHHHHHHHHHHHHHHhhhhc
Q psy14136 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICS----LLI-PQA--AVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----~l~-~~a--~~~~~~~l~~~r~l~G~g~g 173 (534)
+-.|.+.+.+.|.....+|+...-++.|.--.-+.+..-+++..++. ++. .|+ ..++-+.+.+..++.|.-.|
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG 120 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG 120 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence 45678899999999999999888777775433322222222222221 111 122 22356778889999999999
Q ss_pred chhhhHHHHHhc-ccCCCcchhhhhhhhhhhhHHHhhhhHHHHh
Q psy14136 174 LTWPAMYALVGH-WIPSNERSRFMSSFQGFSFGIGLTYPLCGFL 216 (534)
Q Consensus 174 ~~~~~~~~~i~~-~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l 216 (534)
...|..+.++.. ....+.-+.. +...-.+|.+.+.++-.++
T Consensus 121 ~EiPL~mrml~~r~a~~k~~~s~--vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 121 AEIPLLMRMLQRRQAKAKDLGSR--VLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred cchHHHHHHHHHHHHHHHhhhhh--hhhhHhhhhhhHHHHHHHH
Confidence 999999999987 2222221111 2233456666555554443
No 299
>KOG2601|consensus
Probab=85.51 E-value=2.9 Score=40.94 Aligned_cols=123 Identities=8% Similarity=0.020 Sum_probs=65.6
Q ss_pred HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHHHHHhhhhc----chhhh
Q psy14136 113 YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-----QAAVL-----HYGALIALRSIQGIASG----LTWPA 178 (534)
Q Consensus 113 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-----~a~~~-----~~~~l~~~r~l~G~g~g----~~~~~ 178 (534)
.....+..++.|...|+..|+|++...+.+--++.++++ ....+ +++.+..+-++.-.-.+ .....
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344556777889999999999999887765333322221 11111 34444444433322211 11111
Q ss_pred HHHHHhccc----CCCcchhhh---h-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHH
Q psy14136 179 MYALVGHWI----PSNERSRFM---S-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAI 235 (534)
Q Consensus 179 ~~~~i~~~~----~~~~r~~~~---~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li 235 (534)
...+-.||. ..+.+.... + +-..-..-.++.|.+.|.+.+..+-|..-.+.++-.++
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 122223443 223333333 3 22334455678899999999888888765555555555
No 300
>KOG4332|consensus
Probab=83.07 E-value=2.3 Score=39.62 Aligned_cols=145 Identities=13% Similarity=0.043 Sum_probs=75.7
Q ss_pred hhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH-HHHHHHHHhhcCCchhHHH
Q psy14136 313 YMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI-PALLVMLIGYLGCNVALVL 391 (534)
Q Consensus 313 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 391 (534)
|+.+.+|+...++|.++.......++...+.|-+.||.|||+.- +.+.+ ..++. +.-..+....++
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac-----------vtycitYiLsC--iTKhSpqYkVLm 128 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC-----------VTYCITYILSC--ITKHSPQYKVLM 128 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce-----------eeehHHHHHHH--HhhcCCceEEEe
Confidence 44455888888998888776677777788889999999999853 11111 11111 111122344455
Q ss_pred HHHHHHHHHhhhcccccchhh-hcc-----CCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136 392 ITWFVAVTLITASYAGAMANV-VDI-----GPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIA 463 (534)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~-~~~-----~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~ 463 (534)
+.-.+++......++..-++. .|- +|++ ....++-..+. ..+-++++...+..+.|.. + .|.-.+|-..
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~--s-lGPVAPFdAA 205 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF--S-LGPVAPFDAA 205 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh--c-cCCCCchHHH
Confidence 555556655555555544433 232 3333 33333333222 2334455555555555651 1 2344455554
Q ss_pred HHHHHHHHHH
Q psy14136 464 GAVGSCTYFF 473 (534)
Q Consensus 464 ~~~~~~~~~~ 473 (534)
+.+..++..+
T Consensus 206 acfLaigmAv 215 (454)
T KOG4332|consen 206 ACFLAIGMAV 215 (454)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 301
>KOG2601|consensus
Probab=79.99 E-value=13 Score=36.56 Aligned_cols=66 Identities=9% Similarity=0.041 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136 291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIM 356 (534)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l 356 (534)
.+.+.+++..++--..-+-...|+.+..|-+....+.....-+....+...+.|...|+..|.|.+
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi 96 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI 96 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH
Confidence 344455555555545555566677775565555555555555666777777888888999998876
No 302
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=78.73 E-value=21 Score=33.37 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136 456 WRQVFLIAGAVGSCTYFFYQVLGT 479 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~~~~~~~~~~ 479 (534)
....=++..++.+++..++.+.+.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 334445555555566555555433
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=75.54 E-value=29 Score=36.44 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=30.5
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH
Q psy14136 280 WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL 350 (534)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 350 (534)
-.++||.|+- ...+..++..+....++......+.-..-.++..-|.+.....+.-++.++++|+.+.|+
T Consensus 251 hgDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 251 HGDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred hHHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567777652 222222222222222222222333322224455455555555555555555555555554
No 304
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.14 E-value=1.1e+02 Score=31.88 Aligned_cols=57 Identities=12% Similarity=0.142 Sum_probs=37.1
Q ss_pred hhhhccCCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136 410 ANVVDIGPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY 471 (534)
Q Consensus 410 ~~~~~~~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~ 471 (534)
..+.+.+|+. ....+|-.+...++...+...+.+.+.+. .||.....+.-++.++..
T Consensus 305 ~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~-----~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 305 SQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR-----FGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHhHHHHHHHH
Confidence 3444566644 67777777766666666666777888888 788887766655444433
No 305
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.00 E-value=86 Score=30.80 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=57.0
Q ss_pred hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC-chhHHHHHHHH
Q psy14136 318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC-NVALVLITWFV 396 (534)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 396 (534)
.|-...+.+.+.+.+-...-+|+.+.-++.|.--.-+-. .....+.+++-+-..+..+.+..... ..+.+.....+
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv---~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~v 114 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFV---DVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAV 114 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHH---HHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHH
Confidence 466666666666665555556665555444432111100 00111111221112222222332221 34555666666
Q ss_pred HHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136 397 AVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFL 446 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 446 (534)
.+...|.-.|..+.+.+....+..-. .+.....-++|+..+.++.+++.
T Consensus 115 IG~LVG~EiPL~mrml~~r~a~~k~~-~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 115 IGVLVGAEIPLLMRMLQRRQAKAKDL-GSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHhh-hhhhhhhHhhhhhhHHHHHHHHH
Confidence 67777777777776666522111222 22222335666666666555544
No 306
>KOG2881|consensus
Probab=71.69 E-value=48 Score=30.70 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q psy14136 335 CSYLSSVLFCYLADQLFVRNIM 356 (534)
Q Consensus 335 ~~~~~~~~~g~l~dr~~~~~~l 356 (534)
+..++-+-+-+++.|+..|.+.
T Consensus 252 CT~lAVigGk~lAskIS~rtVt 273 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRTVT 273 (294)
T ss_pred HHHHHHhhhHHHhhhheeEEEE
Confidence 3333333333777888887764
No 307
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=70.98 E-value=1.3e+02 Score=30.78 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136 455 SWRQVFLIAGAVGSCTYFFYQVLG 478 (534)
Q Consensus 455 ~~~~~f~~~~~~~~~~~~~~~~~~ 478 (534)
++...-.+.+.+..+..+++.-++
T Consensus 281 ~~~~~~~iig~i~~~~~v~yss~r 304 (429)
T PF03348_consen 281 SWNTWQSIIGLIFTFVSVLYSSFR 304 (429)
T ss_pred CcchHHHHHHHHHHHHHHHHhccc
Confidence 344444455554444444444443
No 308
>KOG4255|consensus
Probab=69.95 E-value=1.1e+02 Score=29.70 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHhhhcccccchhhhccCCCc
Q psy14136 388 ALVLITWFVAVTLITASYAGAMANVVDIGPNF 419 (534)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 419 (534)
+..+...+.....-..........++...|..
T Consensus 113 ~afl~L~F~LAivdc~SnVtFLPFMs~lpp~f 144 (439)
T KOG4255|consen 113 WAFLSLLFGLAIVDCTSNVTFLPFMSQLPPAF 144 (439)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhhhCChHH
Confidence 33333334334444455555666777777765
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=67.35 E-value=91 Score=28.09 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=17.7
Q ss_pred hhhhhhHHHhhhhHHHHhhhhcCCchhhhhh
Q psy14136 199 FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTT 229 (534)
Q Consensus 199 ~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~ 229 (534)
+...-++..+|..+++.+.+..+. +..++.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~ 197 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLP 197 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHH
Confidence 344455566667777777777664 334443
No 310
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=67.13 E-value=1.8e+02 Score=31.05 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=17.9
Q ss_pred ccccchhHhhhHHHHHHHHHHHHHHHHHHHh
Q psy14136 321 SIQTNGLLTGAPFLCSYLSSVLFCYLADQLF 351 (534)
Q Consensus 321 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 351 (534)
++...+..+..++++..+--++.+....|+-
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444555666677777555555665555543
No 311
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.23 E-value=2.2 Score=41.44 Aligned_cols=24 Identities=4% Similarity=-0.056 Sum_probs=0.0
Q ss_pred HHHHHhhhcccccchhhhccCCCc
Q psy14136 396 VAVTLITASYAGAMANVVDIGPNF 419 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~p~~ 419 (534)
+.+.+.+...+..+.+.....|++
T Consensus 6 ~~~~~~~~~q~s~~glas~~p~~y 29 (309)
T PF01733_consen 6 LIGFANAVLQSSLFGLASLFPPKY 29 (309)
T ss_dssp ------------------------
T ss_pred EEHhhhHHHhccHHHHHhcCCHHH
Confidence 344455666666666666655555
No 312
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=59.77 E-value=2.8e+02 Score=30.75 Aligned_cols=32 Identities=6% Similarity=0.088 Sum_probs=16.5
Q ss_pred hhhHHHhhhhHHHHhhhhcCCchhhhhhchhh
Q psy14136 202 FSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLG 233 (534)
Q Consensus 202 ~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~ 233 (534)
..++.++..+++.++...++|..++++.++++
T Consensus 110 M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 110 MTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 34444444444444434456766666655544
No 313
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=59.29 E-value=1.1e+02 Score=28.96 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=20.4
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchh
Q psy14136 280 WVSILTSPPAWAIGITTFGRIWVHYIFIIPGP 311 (534)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (534)
.+++.|+|+.+..................|.|
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 45577788777776666655555555555554
No 314
>KOG3810|consensus
Probab=55.94 E-value=18 Score=35.32 Aligned_cols=96 Identities=13% Similarity=-0.033 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhc
Q psy14136 106 GAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGH 185 (534)
Q Consensus 106 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~ 185 (534)
|..-++..+..+++.+..|.+--++.|..-++++..-...+.++.-.+.+++.|...++-++.+.-.....+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 56667777888899999999998888875555555444444444334555677777777666666666677888888888
Q ss_pred ccCCCcchhhhhhhhh
Q psy14136 186 WIPSNERSRFMSSFQG 201 (534)
Q Consensus 186 ~~~~~~r~~~~~~~~~ 201 (534)
-...+.-|..+|+.++
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 8878887887776643
No 315
>KOG3880|consensus
Probab=54.14 E-value=55 Score=31.57 Aligned_cols=62 Identities=19% Similarity=0.068 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHH
Q psy14136 154 AVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGF 215 (534)
Q Consensus 154 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~ 215 (534)
+.++++..++.-+..|+-.|..+.-..--+.+-.++++|-.+++ ...+-++|..++..++-.
T Consensus 338 ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 338 FTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred hccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 34678888888899999989999988888888888999999999 557888888887766543
No 316
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=53.41 E-value=1.5e+02 Score=29.09 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy14136 456 WRQVFLIAGAVGSCTYFFY 474 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~~~~~ 474 (534)
..+.+++..++.+++.+++
T Consensus 285 ~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 285 FSWLYILAFALIIIGFVVY 303 (334)
T ss_pred ccHHHHHHHHHHHHHhheE
Confidence 3344555444445554444
No 317
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=50.60 E-value=2.8e+02 Score=28.03 Aligned_cols=25 Identities=12% Similarity=0.080 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
........+..+...+.++...+|.
T Consensus 244 ~NT~la~a~g~l~~~~~~~~~~gk~ 268 (404)
T TIGR03644 244 ANTNAAAAGGAIAALLLTKLLFGKA 268 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3344444555555666666554443
No 318
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=50.45 E-value=3.1e+02 Score=28.45 Aligned_cols=68 Identities=10% Similarity=0.000 Sum_probs=44.8
Q ss_pred hcccccchhhhccCCCc--hhHHHHHHhHHHHhh-hhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136 403 ASYAGAMANVVDIGPNF--AGPILAFAQTIHMTA-SFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 403 ~~~~~~~~~~~~~~p~~--~g~~~g~~~~~~~~g-~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
..-...-.-+.+.+|.. +...+|-.+....+. ..+.-.+++.+... .||-..-.+.-++++++.++++
T Consensus 300 LvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~-----~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 300 LVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRR-----VGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-----hhHHHHHHHHHHHHHHHHHHHH
Confidence 33333445556677744 777788777776665 45566677888888 8998887777776666655444
No 319
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=49.33 E-value=1.3e+02 Score=26.00 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=31.2
Q ss_pred ccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhc------CCchhhhhhchhhHHHHHHhh
Q psy14136 186 WIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY------GWRSVFYTTGSLGAIWCVAWW 241 (534)
Q Consensus 186 ~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~------gwr~~f~i~~~~~li~~i~~~ 241 (534)
.+|.+++.+..+ ..++.-.+...--.+=+.+.... .+...+++.++++.+..+++-
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 445556666666 33444444333333333333322 578889998888887665543
No 320
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.17 E-value=59 Score=25.57 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=25.6
Q ss_pred chhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 419 FAGPILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 419 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
.++.+.++-...-.+++++-....|++.|.
T Consensus 39 ~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 39 IKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378888888888888888888899999998
No 321
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=47.71 E-value=2.4e+02 Score=26.49 Aligned_cols=67 Identities=9% Similarity=0.064 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhhcccchhhccc-CCeehhH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhh
Q psy14136 105 QGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFG----FSQLVTAICSLLIPQA----AVLHYGALIALRSIQGIAS 172 (534)
Q Consensus 105 ~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~----~~~~~~~i~~~l~~~a----~~~~~~~l~~~r~l~G~g~ 172 (534)
.....-++..|+.+|....|.+...- .||+.+. .+.+++.+..+. +.. ...++..+++.-|+.|++.
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 34555567777778888888887754 4555443 223333333333 211 1114677888888888874
No 322
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=46.53 E-value=3.4e+02 Score=27.79 Aligned_cols=69 Identities=3% Similarity=-0.358 Sum_probs=39.2
Q ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy14136 283 ILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVR 353 (534)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 353 (534)
.|..+.-++..+.......+.++++.++.-... .-.+.........+.++...+..+++-+...++.|-
T Consensus 90 ~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~--~~~~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 90 PFGVKGSILPSLLNGITLIGWFGVNVILSGIAI--GSGTGLPVWAGILIIGVLMTLVTIFGYRALHKLERI 158 (442)
T ss_pred cccchhHHHHHHHHHHHHhhHHHHHHHHhcccc--ccCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 344444455555555556666666655443321 111333344555566777777777777777777764
No 323
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=44.08 E-value=1.2e+02 Score=25.89 Aligned_cols=28 Identities=11% Similarity=0.131 Sum_probs=20.2
Q ss_pred hhhhccCCCchhHHHHHHhHHHHhhhhH
Q psy14136 410 ANVVDIGPNFAGPILAFAQTIHMTASFL 437 (534)
Q Consensus 410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i 437 (534)
.+.+...|++.|+..|+-.+-.+++...
T Consensus 118 ilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3444556777999999988888876654
No 324
>PRK10263 DNA translocase FtsK; Provisional
Probab=40.38 E-value=3e+02 Score=32.32 Aligned_cols=22 Identities=18% Similarity=-0.210 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh
Q psy14136 331 APFLCSYLSSVLFCYLADQLFV 352 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~ 352 (534)
+...++.+|..+...+..-+|.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3455666666666666555554
No 325
>PTZ00370 STEVOR; Provisional
Probab=40.01 E-value=22 Score=33.29 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCC
Q psy14136 454 ESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ 487 (534)
Q Consensus 454 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (534)
.+|..+-+++.++.++.++++.++.+++++.|..
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~swkh 288 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSWKH 288 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 4555666666677777777777777777776653
No 326
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.63 E-value=1.4e+02 Score=23.64 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
.-.+.+++.....||+.||+-.-..
T Consensus 50 sefIsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3446677777888999999866544
No 327
>KOG1278|consensus
Probab=37.36 E-value=35 Score=35.28 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=23.5
Q ss_pred CccccchhHhhhHHHHHHHHHHHHHHHHHHHh
Q psy14136 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLF 351 (534)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 351 (534)
++++.-|.+++...+.-++.++++|+.+.|+-
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 57777777777777777777777777777763
No 328
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=35.03 E-value=28 Score=31.64 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=23.5
Q ss_pred HHHHHHHhhhhcchhhhHHHHHhcccCC
Q psy14136 162 IALRSIQGIASGLTWPAMYALVGHWIPS 189 (534)
Q Consensus 162 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~ 189 (534)
.+.-.-.|+|+|.++.++..-+.+.+|+
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P~ 202 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYPE 202 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCcc
Confidence 4455678999999999999999999964
No 329
>COG3619 Predicted membrane protein [Function unknown]
Probab=34.86 E-value=3.6e+02 Score=24.73 Aligned_cols=48 Identities=13% Similarity=0.143 Sum_probs=28.2
Q ss_pred CCCcchhhhccccccCCCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCC
Q psy14136 73 RGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT 132 (534)
Q Consensus 73 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 132 (534)
.++.+|.....+.+.. ++...........+..+++......+..|..|
T Consensus 37 s~~TGN~v~~gi~l~~------------~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 37 SFMTGNLVLLGIELAE------------GDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hheeccHHHHHHHHhc------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445565555555542 24556667777777777776555555555554
No 330
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=34.56 E-value=4.2e+02 Score=25.34 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=35.1
Q ss_pred HHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCC
Q psy14136 161 LIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGW 222 (534)
Q Consensus 161 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gw 222 (534)
.-..|.+.|+-. ..+..++++++-.+|++++--..- +..+.+++.++-+++ |.+.+...|
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhccC
Confidence 456888888875 356778999999998655432222 323334444444444 444544333
No 331
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=34.04 E-value=33 Score=27.92 Aligned_cols=9 Identities=0% Similarity=-0.038 Sum_probs=3.5
Q ss_pred HHHHhhcCC
Q psy14136 472 FFYQVLGTS 480 (534)
Q Consensus 472 ~~~~~~~~~ 480 (534)
+++++++|.
T Consensus 83 li~y~irR~ 91 (122)
T PF01102_consen 83 LISYCIRRL 91 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444433
No 332
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=32.88 E-value=78 Score=27.29 Aligned_cols=15 Identities=0% Similarity=0.160 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q psy14136 456 WRQVFLIAGAVGSCT 470 (534)
Q Consensus 456 ~~~~f~~~~~~~~~~ 470 (534)
....++++.++..+.
T Consensus 94 l~R~~~Vl~g~s~l~ 108 (163)
T PF06679_consen 94 LKRALYVLVGLSALA 108 (163)
T ss_pred hhhhHHHHHHHHHHH
Confidence 344455554444433
No 333
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=32.48 E-value=1.3e+02 Score=28.76 Aligned_cols=36 Identities=22% Similarity=0.044 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 137 GFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 137 ~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
+.+++++++++++..+.. ++.+.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~-~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLF-PYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHH
Confidence 444555555555554443 344445444455555444
No 334
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=31.92 E-value=51 Score=30.91 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCC
Q psy14136 454 ESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ 487 (534)
Q Consensus 454 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (534)
..|..+-+++.++.++.++++.++.+++++.|+.
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK~swkh 292 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRKKSWKH 292 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 4455566666666777777777777777776643
No 335
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=30.31 E-value=1.6e+02 Score=29.25 Aligned_cols=19 Identities=16% Similarity=0.003 Sum_probs=9.3
Q ss_pred CCCchhHHHHHHhHHHHhh
Q psy14136 416 GPNFAGPILAFAQTIHMTA 434 (534)
Q Consensus 416 ~p~~~g~~~g~~~~~~~~g 434 (534)
.+..-|-..|..-....++
T Consensus 268 v~v~~G~~~G~lia~~~l~ 286 (374)
T PF01528_consen 268 VKVQFGPHLGTLIACGILG 286 (374)
T ss_pred hhccccchHHHHHHHHHHH
Confidence 3444566666554444333
No 336
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=30.20 E-value=1.6e+02 Score=21.63 Aligned_cols=22 Identities=14% Similarity=0.075 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q psy14136 455 SWRQVFLIAGAVGSCTYFFYQV 476 (534)
Q Consensus 455 ~~~~~f~~~~~~~~~~~~~~~~ 476 (534)
|...+|.++.++.++..++..+
T Consensus 11 Gm~iVF~~L~lL~~~i~l~~~~ 32 (79)
T PF04277_consen 11 GMGIVFLVLILLILVISLMSKL 32 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555444444333333
No 337
>KOG4112|consensus
Probab=29.30 E-value=1.4e+02 Score=22.81 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=12.8
Q ss_pred HHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136 423 ILAFAQTIHMTASFLSPMVAGYFLQD 448 (534)
Q Consensus 423 ~~g~~~~~~~~g~~i~~~~~g~l~~~ 448 (534)
+==..+.+-.+++++| ++.|+..+.
T Consensus 24 aEr~~q~ilti~aiVg-~i~Gf~~Qq 48 (101)
T KOG4112|consen 24 AERFQQLILTIGAIVG-FIYGFAQQQ 48 (101)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3334455544555444 455666666
No 338
>KOG3097|consensus
Probab=29.27 E-value=4.2e+02 Score=26.07 Aligned_cols=62 Identities=16% Similarity=0.058 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
|.++.+.....+.+.++.+.... +...+.+....+ .....+.-+..+++.+.+++++|-|..
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nl-----q~~vn~~lg~~s--l~~~y~~l~~s~m~~~~~Ir~~g~K~t 90 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNL-----QTSVNYDLGTVS--LGALYLSLIDSSMFMPLLIRFLGTKWT 90 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH-----HHHHhcCcccch--hhhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 45666666666666666555432 222222222222 223345566677777789999998864
No 339
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=29.18 E-value=5.3e+02 Score=24.83 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=26.5
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc---cCCeehhHHHHHHHHHHHHH
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR---FGTKTVFGFSQLVTAICSLL 149 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr---~Grr~~l~~~~~~~~i~~~l 149 (534)
.+.+|......+++.+...... +.+-.++ ||.||.=+++.++.++.-+.
T Consensus 52 ADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~Li~ 103 (296)
T COG1230 52 ADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALLLIV 103 (296)
T ss_pred HhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHHHHH
Confidence 3455665566666655544432 2233333 77777766666665554433
No 340
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.80 E-value=6.3e+02 Score=25.61 Aligned_cols=25 Identities=16% Similarity=-0.126 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 331 APFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 331 ~~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
........+..+...+.|++.++|.
T Consensus 230 ~nT~lA~a~g~l~~~~~~~~~~gk~ 254 (403)
T TIGR00836 230 VNTNLAAAAGGLTWLLIDWLKHGKP 254 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3344445555556677777765553
No 341
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=28.73 E-value=4.4e+02 Score=25.07 Aligned_cols=17 Identities=6% Similarity=0.040 Sum_probs=7.2
Q ss_pred chhHHHHHHHHHHHHhh
Q psy14136 386 NVALVLITWFVAVTLIT 402 (534)
Q Consensus 386 ~~~~~~~~~~~~~~~~~ 402 (534)
..+...+.+.+..|+.+
T Consensus 22 ~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 22 YPWLLILVLALLTFFFG 38 (284)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 44444444444444333
No 342
>COG2119 Predicted membrane protein [Function unknown]
Probab=28.01 E-value=1.1e+02 Score=26.78 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=28.2
Q ss_pred HHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHH
Q psy14136 112 FYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLL 149 (534)
Q Consensus 112 ~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l 149 (534)
..+..+++-..+.++++|+..|++-.++.+++.+..+.
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 34556677777889999999999888877776665433
No 343
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=27.15 E-value=3e+02 Score=21.81 Aligned_cols=61 Identities=15% Similarity=-0.097 Sum_probs=37.9
Q ss_pred cchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHh
Q psy14136 123 GGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184 (534)
Q Consensus 123 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 184 (534)
.=..+|.+.|++..+...+..+++..+.+++. .+.+.=.+.-+-.|+|..........+-.
T Consensus 20 ~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al-k~ipvgvAYAiW~GiG~v~~~l~g~~~f~ 80 (106)
T COG2076 20 LLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL-KTIPLGVAYAIWTGIGIVGTALVGVLLFG 80 (106)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44678888888887777777777766655554 34555555566666665544444444333
No 344
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=27.09 E-value=3e+02 Score=21.36 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=15.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q psy14136 454 ESWRQVFLIAGAVGSCTYFFYQ 475 (534)
Q Consensus 454 ~~~~~~f~~~~~~~~~~~~~~~ 475 (534)
..|-.+|.+++++.+.++....
T Consensus 50 lQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 50 LQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3576778888877776665543
No 345
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=26.84 E-value=3.2e+02 Score=30.04 Aligned_cols=52 Identities=12% Similarity=-0.031 Sum_probs=33.3
Q ss_pred cccchhhccc----CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 121 VVGGVLTQRF----GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 121 ~~~G~l~Dr~----Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
.+++-++|.= ||.+-++++.++++++++...+.. +..+.+...-++.+++.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~-~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF-PKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHH
Confidence 3445566643 567888999999999888876654 344555555555555544
No 346
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.03 E-value=4.6e+02 Score=23.15 Aligned_cols=24 Identities=29% Similarity=0.220 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136 332 PFLCSYLSSVLFCYLADQLFVRNI 355 (534)
Q Consensus 332 ~~~~~~~~~~~~g~l~dr~~~~~~ 355 (534)
..++..++.+.+.++++|+..|.+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l 166 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLL 166 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHH
Confidence 345667777777788888887765
No 347
>PTZ00370 STEVOR; Provisional
Probab=25.88 E-value=85 Score=29.57 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=17.9
Q ss_pred hhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136 208 LTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF 245 (534)
Q Consensus 208 ~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~ 245 (534)
.|+..+........|-.+-++..++.++.+++..|+.+
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344555555555555555555444433
No 348
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=24.17 E-value=1.2e+02 Score=23.96 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH
Q psy14136 102 TTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI 150 (534)
Q Consensus 102 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~ 150 (534)
++..|=+.++|.-.+.+.++.+++..|+.-+.+-=.+|..++.+|..++
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 3667888999999999999999999999998888788877777776553
No 349
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=24.15 E-value=61 Score=25.61 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=23.0
Q ss_pred hhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136 218 AHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP 248 (534)
Q Consensus 218 ~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p 248 (534)
+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999887777777777776666653
No 350
>PHA03231 glycoprotein BALF4; Provisional
Probab=22.99 E-value=98 Score=34.13 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=10.9
Q ss_pred HHhHHHHhhhhHHhHhhhhc
Q psy14136 426 FAQTIHMTASFLSPMVAGYF 445 (534)
Q Consensus 426 ~~~~~~~~g~~i~~~~~g~l 445 (534)
+.+.++.++++++..+.|.+
T Consensus 678 vg~vv~~v~ga~~SiVsG~~ 697 (829)
T PHA03231 678 VGNVVSGVAGAVGSIVSGVI 697 (829)
T ss_pred hhhhhhhHHHHHHHHHHHHH
Confidence 34455555566666655543
No 351
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.94 E-value=8.6e+02 Score=25.16 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=14.3
Q ss_pred hhHHHHHHhHHHHhhhhHHh
Q psy14136 420 AGPILAFAQTIHMTASFLSP 439 (534)
Q Consensus 420 ~g~~~g~~~~~~~~g~~i~~ 439 (534)
.|..++++.+.+.++.++.=
T Consensus 222 ~G~lf~lYli~Ygi~RF~iE 241 (460)
T PRK13108 222 HGRLFGFYVAFYCAGRFCVE 241 (460)
T ss_pred CchHHHHHHHHHHHHHHHhh
Confidence 57888888777777766544
No 352
>PRK10621 hypothetical protein; Provisional
Probab=22.65 E-value=6.4e+02 Score=23.61 Aligned_cols=23 Identities=4% Similarity=-0.356 Sum_probs=13.4
Q ss_pred hhhHHHhhhhHHHHhhhhcCCch
Q psy14136 202 FSFGIGLTYPLCGFLIAHYGWRS 224 (534)
Q Consensus 202 ~~~G~~~g~~l~~~l~~~~gwr~ 224 (534)
..++.++|.+++.++..+.+-+.
T Consensus 83 l~~~~l~Ga~~G~~l~~~l~~~~ 105 (266)
T PRK10621 83 NIAMTFVGSMSGALLVQYVQADI 105 (266)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHH
Confidence 34556666667766666554333
No 353
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=22.58 E-value=4.1e+02 Score=26.13 Aligned_cols=7 Identities=29% Similarity=0.757 Sum_probs=3.0
Q ss_pred Cchhhhh
Q psy14136 222 WRSVFYT 228 (534)
Q Consensus 222 wr~~f~i 228 (534)
|+.+.++
T Consensus 1 ~~~~~~~ 7 (340)
T PF12794_consen 1 WQSPLLF 7 (340)
T ss_pred CCchHHH
Confidence 4444443
No 354
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=21.79 E-value=3.1e+02 Score=25.53 Aligned_cols=24 Identities=17% Similarity=0.319 Sum_probs=11.6
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHHH
Q psy14136 327 LLTGAPFLCSYLSSVLFCYLADQL 350 (534)
Q Consensus 327 ~~~~~~~~~~~~~~~~~g~l~dr~ 350 (534)
+...+..+..++..+..+....|.
T Consensus 132 l~~~i~~~v~~i~~i~~~~~~~K~ 155 (248)
T PF11368_consen 132 LFIIIPFLVLLILTIILQKFLRKT 155 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445555555555544444
No 355
>COG4769 Predicted membrane protein [Function unknown]
Probab=21.69 E-value=2e+02 Score=24.76 Aligned_cols=53 Identities=13% Similarity=0.059 Sum_probs=34.7
Q ss_pred HHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136 111 SFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA 171 (534)
Q Consensus 111 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g 171 (534)
++....++.+...-++..++|+|.+-.+|.-.++ ++. +|..++++.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~mG------aF~--hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVMG------AFT--HNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhHH------HHH--HhHHHHHHHHHHHhcc
Confidence 3444455566666688889998887554433221 133 6899999999988754
No 356
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.58 E-value=3.7e+02 Score=20.47 Aligned_cols=60 Identities=15% Similarity=0.112 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH
Q psy14136 287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ 349 (534)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 349 (534)
+..+.+.+..+..++++.....+.|..+.....-+....|+.. +++.++..+...++--+
T Consensus 16 r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~---g~~~~~~~~~l~~~Yv~ 75 (91)
T PF04341_consen 16 RLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVL---GLGQIVFAWVLTWLYVR 75 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHH---HHHHHHHHHHHHHHHHH
Confidence 3455666777777788888888888888764331233444433 34444444444443333
No 357
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=21.46 E-value=5.2e+02 Score=26.13 Aligned_cols=95 Identities=12% Similarity=0.149 Sum_probs=57.3
Q ss_pred CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136 95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL 174 (534)
Q Consensus 95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~ 174 (534)
.+..|+++++...+.+...+...++.++-.+-.-++|.|..+..+.....++.... ......+...+..-++.|+-.-.
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~-~~~~~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIA-IGAGGGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHH-HhhhhhHHHHHHHHHHHHHHHHH
Confidence 45678999988888888888888888876433335777766655544433332221 11123566666666666655433
Q ss_pred hhhhHHHHHhcccCCCc
Q psy14136 175 TWPAMYALVGHWIPSNE 191 (534)
Q Consensus 175 ~~~~~~~~i~~~~~~~~ 191 (534)
.. .....+.+.+|+.-
T Consensus 99 lg-~~~~~l~~~iPp~v 114 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVV 114 (406)
T ss_pred HH-HHHHHHHHHCCcHH
Confidence 33 34556777777644
No 358
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=21.35 E-value=4.3e+02 Score=21.16 Aligned_cols=48 Identities=8% Similarity=-0.023 Sum_probs=30.4
Q ss_pred hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136 198 SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF 245 (534)
Q Consensus 198 ~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~ 245 (534)
......++..+|..+.+.-.+.-||-+-.....+..++..++.+...+
T Consensus 43 ~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~Gl~y~~il~lis~~~~~ 90 (116)
T PF12670_consen 43 VVIIYILSVFIGGFYAGRKAGSKGWLHGLLVGLLYFLILLLISFLFGP 90 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 344556677777777777777778887776655555554555554433
No 359
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=21.29 E-value=1e+02 Score=21.51 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=13.5
Q ss_pred Cchhhhhhchh---hHHHHHHhhhhccCCC
Q psy14136 222 WRSVFYTTGSL---GAIWCVAWWFLAFDAP 248 (534)
Q Consensus 222 wr~~f~i~~~~---~li~~i~~~~~~~~~p 248 (534)
+|..|.+..++ .++.=++.++++|+.|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 45555555443 2333334555667655
No 360
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=21.23 E-value=2.6e+02 Score=30.74 Aligned_cols=51 Identities=10% Similarity=-0.041 Sum_probs=32.1
Q ss_pred ccchhhccc----CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136 122 VGGVLTQRF----GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG 173 (534)
Q Consensus 122 ~~G~l~Dr~----Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g 173 (534)
+.+-++|.= ||.+-++++.++++++++...+.. +..+.+..+-++.+++.+
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~-~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF-GKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHH
Confidence 345566643 566778888888888888765554 345555555555555443
No 361
>PRK02237 hypothetical protein; Provisional
Probab=20.45 E-value=1.9e+02 Score=22.91 Aligned_cols=48 Identities=6% Similarity=0.042 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH
Q psy14136 103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI 150 (534)
Q Consensus 103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~ 150 (534)
+..|=+.++|.-.+.+.++.+++..|+.-+-+-=.+|..++.+|..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 458889999999999999999999999988877777777777776553
No 362
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.11 E-value=2.2e+02 Score=18.71 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=15.0
Q ss_pred HhhhhHHHHhhhhcCC----chhhhhhchhhHHHHH
Q psy14136 207 GLTYPLCGFLIAHYGW----RSVFYTTGSLGAIWCV 238 (534)
Q Consensus 207 ~~g~~l~~~l~~~~gw----r~~f~i~~~~~li~~i 238 (534)
++|..+++++.+.+++ .+.-++.++++.+..+
T Consensus 5 iiGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill 40 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILL 40 (48)
T ss_pred hHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 3455555555554443 4444444444444433
Done!