BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1414
(551 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila melanogaster GN=Sos PE=1
SV=2
Length = 1596
Score = 245 bits (625), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/234 (53%), Positives = 168/234 (71%), Gaps = 8/234 (3%)
Query: 51 VLQQVHPTLTAREDACLYVESLVLKILAMLCSKPSPHTTSDVEERVRRQFPTPIDKWAMH 110
VL+QVHP +TA+EDA LYVE L L++LAMLC+KP PH+ DVEE+V + FP PID+WA++
Sbjct: 80 VLEQVHPRVTAKEDALLYVEKLCLRLLAMLCAKPLPHSVQDVEEKVNKSFPAPIDQWALN 139
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
EAKE I K+K VLP EK+H LL KDVLQYK++ +VS ++ AVLEYISADILK+AG
Sbjct: 140 EAKEVINSKKRKS---VLPTEKVHTLLQKDVLQYKIDSSVSAFLVAVLEYISADILKMAG 196
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVLMDMFYQDEHTSDSGSIVHSVSETTSSELTYEEIV 230
+YV I H E+ ++DI+V M AD+VLMDM Q E + ++ TYEE V
Sbjct: 197 DYVIKIAHCEITKEDIEVVMNADRVLMDMLNQSEAHILPSPLSLPAQRASA---TYEETV 253
Query: 231 HDLVTDEKQHLRDLHMINKVFLEEIVKLIPPGKCKELDQMFANLMDIYEFSLNF 284
+L+ DEKQ+ RDLHMI +VF EE+VK++ +EL+ +F+N+MDIYE ++
Sbjct: 254 KELIHDEKQYQRDLHMIIRVFREELVKIV--SDPRELEPIFSNIMDIYEVTVTL 305
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 133/232 (57%), Gaps = 35/232 (15%)
Query: 288 PDPLFIHETTSSELTYEEIVHDLVTDEKQHLRDLHMINKVFLEEIVKLIPPGKCKELDQM 347
P PL + +S TYEE V +L+ DEKQ+ RDLHMI +VF EE+VK++ +EL+ +
Sbjct: 235 PSPLSLPAQRASA-TYEETVKELIHDEKQYQRDLHMIIRVFREELVKIV--SDPRELEPI 291
Query: 348 FANLMDIYEFSCNLVGILEDNLEMCNEASNVVIGSCLEELAEAAEFDVYSRYAKDITYYK 407
F+N+MDIYE + L+G LED +EM E S +GSC EELAEA EFDVY +YA D+T
Sbjct: 292 FSNIMDIYEVTVTLLGSLEDVIEMSQEQSAPCVGSCFEELAEAEEFDVYKKYAYDVTSQA 351
Query: 408 CPEKLLEELKNPEVSIPLQSDCCAKDITYYKCPEKLLEELKNPEVSIPLQSGGQGFKEAV 467
+ L L P S L + G GF++AV
Sbjct: 352 SRDALNNLLSKPGASS--------------------------------LTTAGHGFRDAV 379
Query: 468 KYYLPKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESLIQVEGLLKALQVDL 519
KYYLPKL L P+ H F+YFDYI+ L+ LS ++D ES QV+GLL L DL
Sbjct: 380 KYYLPKLLLVPICHAFVYFDYIKHLKDLSSSQDDIESFEQVQGLLHPLHCDL 431
>sp|Q07889|SOS1_HUMAN Son of sevenless homolog 1 OS=Homo sapiens GN=SOS1 PE=1 SV=1
Length = 1333
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/261 (49%), Positives = 175/261 (67%), Gaps = 11/261 (4%)
Query: 51 VLQQVHPTLTAREDACLYVESLVLKILAMLCSKPSPHTTSDVEERVRRQFPTPIDKWAMH 110
V QVHPTL + +DA YVE L+L++L MLC + P + SDVEERV++ FP PIDKWA+
Sbjct: 30 VQGQVHPTLESNDDALQYVEELILQLLNMLC-QAQPRSASDVEERVQKSFPHPIDKWAIA 88
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
+A+ AIEK K++ + L LPVEKIH LL K+VL YK++ VS+YI AVLEYISADILKL G
Sbjct: 89 DAQSAIEKRKRR-NPLSLPVEKIHPLL-KEVLGYKIDHQVSVYIVAVLEYISADILKLVG 146
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVLMDMFYQDEHTSDSGSIVHSVSETTSSELTYEEIV 230
NYV+NIRH E+ +QDIKVAM ADKVLMDMF+QD + S+ +TS E TY ++V
Sbjct: 147 NYVRNIRHYEITKQDIKVAMCADKVLMDMFHQDVEDINILSLTDE-EPSTSGEQTYYDLV 205
Query: 231 HDLVTDEKQHLRDLHMINKVFLEEIVKLIPPGKCKELDQMFANLMDIYEFSLNFKTPPDP 290
+ + +Q++R+L++I KVF E V +++ +F+ ++DI+E S+
Sbjct: 206 KAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVK------- 258
Query: 291 LFIHETTSSELTYEEIVHDLV 311
L H + E+T E H LV
Sbjct: 259 LLGHIEDTVEMTDEGSPHPLV 279
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 40/243 (16%)
Query: 267 LDQMFANLMDIYEFSLNFKTPPDPLFIHETTSSELTYEEIVHDLVTDEKQHLRDLHMINK 326
+D ++ DI SL + P +TS E TY ++V + + +Q++R+L++I K
Sbjct: 173 MDMFHQDVEDINILSLTDEEP--------STSGEQTYYDLVKAFMAEIRQYIRELNLIIK 224
Query: 327 VFLEEIVKLIPPGKCKELDQMFANLMDIYEFSCNLVGILEDNLEMCNEAS-NVVIGSCLE 385
VF E V +++ +F+ ++DI+E S L+G +ED +EM +E S + ++GSC E
Sbjct: 225 VFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFE 284
Query: 386 ELAEAAEFDVYSRYAKDITYYKCPEKLLEELKNPEVSIPLQSDCCAKDITYYKCPEKLLE 445
+LAE FD Y YA+DI P D + L
Sbjct: 285 DLAEELAFDPYESYARDILR------------------PGFHD-------------RFLS 313
Query: 446 ELKNPEVSIPLQSGGQGFKEAVKYYLPKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESL 505
+L P ++ LQS G+GFKEAV+Y LP+L L P++HC YF+ ++ L S D+ED+E L
Sbjct: 314 QLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECL 373
Query: 506 IQV 508
Q
Sbjct: 374 KQA 376
>sp|Q62245|SOS1_MOUSE Son of sevenless homolog 1 OS=Mus musculus GN=Sos1 PE=1 SV=2
Length = 1319
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/261 (47%), Positives = 175/261 (67%), Gaps = 11/261 (4%)
Query: 51 VLQQVHPTLTAREDACLYVESLVLKILAMLCSKPSPHTTSDVEERVRRQFPTPIDKWAMH 110
V QVHPTL + +DA YVE L+L++L MLC + P + SDVEERV++ FP PIDKWA+
Sbjct: 30 VQGQVHPTLESNDDALQYVEELILQLLNMLC-QAQPRSASDVEERVQKSFPHPIDKWAIA 88
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
+A+ AIEK K++ + L LP E+IH+LL ++VL YK++ VS+YI AVLEYISADILKL G
Sbjct: 89 DAQSAIEKRKRR-NPLSLPAERIHHLL-REVLGYKIDHQVSVYIVAVLEYISADILKLVG 146
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVLMDMFYQDEHTSDSGSIVHSVSETTSSELTYEEIV 230
NYV+NIRH E+ +QDIKVAM ADKVLMDMF+QD + S+ +TS E TY ++V
Sbjct: 147 NYVRNIRHYEITKQDIKVAMCADKVLMDMFHQDVEDINILSLTDE-EPSTSGEQTYYDLV 205
Query: 231 HDLVTDEKQHLRDLHMINKVFLEEIVKLIPPGKCKELDQMFANLMDIYEFSLNFKTPPDP 290
+ + +Q++R+L++I KVF E V +++ +F+ ++DI+E S+
Sbjct: 206 KAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSSNDVENIFSRIVDIHELSVK------- 258
Query: 291 LFIHETTSSELTYEEIVHDLV 311
L H + E+T E H LV
Sbjct: 259 LLGHIEDTVEMTDEGSPHPLV 279
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 40/243 (16%)
Query: 267 LDQMFANLMDIYEFSLNFKTPPDPLFIHETTSSELTYEEIVHDLVTDEKQHLRDLHMINK 326
+D ++ DI SL + P +TS E TY ++V + + +Q++R+L++I K
Sbjct: 173 MDMFHQDVEDINILSLTDEEP--------STSGEQTYYDLVKAFMAEIRQYIRELNLIIK 224
Query: 327 VFLEEIVKLIPPGKCKELDQMFANLMDIYEFSCNLVGILEDNLEMCNEAS-NVVIGSCLE 385
VF E V +++ +F+ ++DI+E S L+G +ED +EM +E S + ++GSC E
Sbjct: 225 VFREPFVSNSKLFSSNDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFE 284
Query: 386 ELAEAAEFDVYSRYAKDITYYKCPEKLLEELKNPEVSIPLQSDCCAKDITYYKCPEKLLE 445
+LAE FD Y YA+DI L+ L
Sbjct: 285 DLAEELAFDPYESYARDI---------------------LRPGFHGH----------FLS 313
Query: 446 ELKNPEVSIPLQSGGQGFKEAVKYYLPKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESL 505
+L P ++ LQS G+GFKEAV+Y LP+L L P++HC YF+ ++ L S D+ED+E +
Sbjct: 314 QLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECM 373
Query: 506 IQV 508
Q
Sbjct: 374 KQA 376
>sp|Q02384|SOS2_MOUSE Son of sevenless homolog 2 OS=Mus musculus GN=Sos2 PE=1 SV=2
Length = 1333
Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 170/236 (72%), Gaps = 13/236 (5%)
Query: 51 VLQQVHPTLTAREDACLYVESLVLKILAMLCSKPSPHTTSDVEERVRRQFPTPIDKWAMH 110
V +QVHPTL+A E++ Y+E L+ ++L LC P T DVEERV++ FP PIDKWA+
Sbjct: 30 VQEQVHPTLSANEESLYYIEELIFQLLNKLCMA-QPRTVQDVEERVQKTFPHPIDKWAIA 88
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
+A+ AIEK K++ + L+LPV+KIH L K+VL YKV+ +VS+YI AVLEYISADILKLAG
Sbjct: 89 DAQSAIEKRKRR-NPLLLPVDKIHPSL-KEVLGYKVDYHVSLYIVAVLEYISADILKLAG 146
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVLMDMFYQDEHTSDSGSIVHSVSETTSS-ELTYEEI 229
NYV NIRH E++QQDIKV+M ADKVLMDMF QD+ D G + E SS EL Y ++
Sbjct: 147 NYVFNIRHYEISQQDIKVSMCADKVLMDMFDQDD---DIGLVSLCEDEPCSSGELNYYDL 203
Query: 230 VHDLVTDEKQHLRDLHMINKVFLEEIV---KLIPPGKCKELDQMFANLMDIYEFSL 282
V + +E+Q+LR+L+MI KVF E + KL P E++++F+N+ DI+E ++
Sbjct: 204 VRTEIAEERQYLRELNMIIKVFREAFLLDRKLFKPS---EIEKIFSNISDIHELTV 256
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 124/224 (55%), Gaps = 38/224 (16%)
Query: 297 TSSELTYEEIVHDLVTDEKQHLRDLHMINKVFLEEIV---KLIPPGKCKELDQMFANLMD 353
+S EL Y ++V + +E+Q+LR+L+MI KVF E + KL P E++++F+N+ D
Sbjct: 194 SSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLLDRKLFKPS---EIEKIFSNISD 250
Query: 354 IYEFSCNLVGILEDNLEMCNEAS-NVVIGSCLEELAEAAEFDVYSRYAKDITYYKCPEKL 412
I+E + L+G++ED +EM +E+S + + GSC E+LAE FD Y ++DI
Sbjct: 251 IHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDIL-------- 302
Query: 413 LEELKNPEVSIPLQSDCCAKDITYYKCPEKLLEELKNPEVSIPLQSGGQGFKEAVKYYLP 472
PE + + + + P V++ QS GFKEAV+Y LP
Sbjct: 303 -----APEFN------------------DHFSKLMARPAVALHFQSIADGFKEAVRYVLP 339
Query: 473 KLFLHPLWHCFLYFDYIRILRGLSPDKEDRESLIQVEGLLKALQ 516
+L L P++HC+ YF+ ++ L+ S ++ED+E L Q L LQ
Sbjct: 340 RLMLVPVYHCWHYFELLKQLKACSEEQEDKECLNQAITALMNLQ 383
>sp|Q07890|SOS2_HUMAN Son of sevenless homolog 2 OS=Homo sapiens GN=SOS2 PE=1 SV=2
Length = 1332
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 170/236 (72%), Gaps = 14/236 (5%)
Query: 51 VLQQVHPTLTAREDACLYVESLVLKILAMLCSKPSPHTTSDVEERVRRQFPTPIDKWAMH 110
V +QVHPTL+A E++ Y+E L+ ++L LC P T DVEERV++ FP PIDKWA+
Sbjct: 30 VQEQVHPTLSANEESLYYIEELIFQLLNKLCMA-QPRTVQDVEERVQKTFPHPIDKWAIA 88
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
+A+ AIEK K++ + L+LPV+KIH L K+VL YKV+ +VS+YI AVLEYISADILKLAG
Sbjct: 89 DAQSAIEKRKRR-NPLLLPVDKIHPSL-KEVLGYKVDYHVSLYIVAVLEYISADILKLAG 146
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVLMDMFYQDEHTSDSGSIVHSVSETTSS-ELTYEEI 229
NYV NIRH E++QQDIKV+M ADKVLMDMF QD D G + E +SS EL Y ++
Sbjct: 147 NYVFNIRHYEISQQDIKVSMCADKVLMDMFDQD----DIGLVSLCEDEPSSSGELNYYDL 202
Query: 230 VHDLVTDEKQHLRDLHMINKVFLEEIV---KLIPPGKCKELDQMFANLMDIYEFSL 282
V + +E+Q+LR+L+MI KVF E + KL P +++++F+N+ DI+E ++
Sbjct: 203 VRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPS---DIEKIFSNISDIHELTV 255
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 39/238 (16%)
Query: 296 TTSSELTYEEIVHDLVTDEKQHLRDLHMINKVFLEEIV---KLIPPGKCKELDQMFANLM 352
++S EL Y ++V + +E+Q+LR+L+MI KVF E + KL P +++++F+N+
Sbjct: 192 SSSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPS---DIEKIFSNIS 248
Query: 353 DIYEFSCNLVGILEDNLEMCNEAS-NVVIGSCLEELAEAAEFDVYSRYAKDITYYKCPEK 411
DI+E + L+G++ED +EM +E+S + + GSC E+LAE FD Y ++DI
Sbjct: 249 DIHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDIL------- 301
Query: 412 LLEELKNPEVSIPLQSDCCAKDITYYKCPEKLLEELKNPEVSIPLQSGGQGFKEAVKYYL 471
+PE E + + P V++ QS GFKEAV+Y L
Sbjct: 302 ------SPEFH------------------EHFNKLMARPAVALHFQSIADGFKEAVRYVL 337
Query: 472 PKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESLIQVEGLLKALQVDLSDSLQNY-PR 528
P+L L P++HC+ YF+ ++ L+ S ++EDRE L Q L LQ + + Y PR
Sbjct: 338 PRLMLVPVYHCWHYFELLKQLKACSEEQEDRECLNQAITALMNLQGSMDRIYKQYSPR 395
>sp|Q8CCK0|H2AW_MOUSE Core histone macro-H2A.2 OS=Mus musculus GN=H2afy2 PE=1 SV=3
Length = 372
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 119 SKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIRH 178
S+ + ++ PV ++ L K +Y++ + +Y+ AV+EY++A+IL+LAGN ++ +
Sbjct: 14 SRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILELAGNAARDNKK 73
Query: 179 VEVAQQDIKVAMYADKVLMDMF 200
+A + I +A+ D+ L +
Sbjct: 74 ARIAPRHILLAVANDEELNQLL 95
>sp|Q9P0M6|H2AW_HUMAN Core histone macro-H2A.2 OS=Homo sapiens GN=H2AFY2 PE=1 SV=3
Length = 372
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 119 SKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIRH 178
S+ + ++ PV ++ L K +Y++ + +Y+ AV+EY++A+IL+LAGN ++ +
Sbjct: 14 SRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILELAGNAARDNKK 73
Query: 179 VEVAQQDIKVAMYADKVLMDMF 200
+A + I +A+ D+ L +
Sbjct: 74 ARIAPRHILLAVANDEELNQLL 95
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 16 IGSPWRDRISLAILELQEKGTIQMLYDKWWKNTGDVLQQVHPTLTAREDACLYVESL 72
IGSP+RD+I++AIL+LQE+G + M+ +KWW+ G P ++E + L VE++
Sbjct: 785 IGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNG------CPEEDSKEASALGVENI 835
>sp|P35061|H2A_ACRFO Histone H2A OS=Acropora formosa PE=3 SV=2
Length = 125
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 111 EAKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAG 170
+A+ KS+ + L PV +IH LL K +V +Y+ AVLEY+SA+IL+LAG
Sbjct: 8 KAQGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAG 67
Query: 171 NYVKNIRHVEVAQQDIKVAMYADKVL 196
N ++ + + + +++A+ D+ L
Sbjct: 68 NAARDNKKSRIIPRHLQLAVRNDEEL 93
>sp|P04910|H2A2_SCHPO Histone H2A-beta OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=hta2 PE=1 SV=2
Length = 131
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 112 AKEAIEKSKKKISC---LVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKL 168
K A+ KS + S L PV ++H LL K +V +Y+ AVLEY++A+IL+L
Sbjct: 8 GKAAVAKSAQSRSAKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILEL 67
Query: 169 AGNYVKNIRHVEVAQQDIKVAMYADKVL 196
AGN ++ + + + +++A+ D+ L
Sbjct: 68 AGNAARDNKKTRIIPRHLQLAIRNDEEL 95
>sp|P04909|H2A1_SCHPO Histone H2A-alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=hta1 PE=1 SV=3
Length = 132
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 112 AKEAIEKSKKKISC---LVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKL 168
K A+ KS + S L PV ++H LL K +V +Y+ AVLEY++A+IL+L
Sbjct: 8 GKAAVAKSAQSRSAKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILEL 67
Query: 169 AGNYVKNIRHVEVAQQDIKVAMYADKVL 196
AGN ++ + + + +++A+ D+ L
Sbjct: 68 AGNAARDNKKTRIIPRHLQLAIRNDEEL 95
>sp|A5DBG4|H2A1_PICGU Histone H2A.1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=HTA1 PE=3 SV=1
Length = 130
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 49/85 (57%)
Query: 112 AKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGN 171
+ E S+ + L PV +IH LL K +V +Y+T+VLEY++A+IL+LAGN
Sbjct: 10 SSEKASTSRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGN 69
Query: 172 YVKNIRHVEVAQQDIKVAMYADKVL 196
++ + + + +++A+ D+ L
Sbjct: 70 AARDNKKSRIIPRHLQLAIRNDEEL 94
>sp|Q4FZT6|H2A3_RAT Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3
Length = 130
Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q8BFU2|H2A3_MOUSE Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=1 SV=3
Length = 130
Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q7L7L0|H2A3_HUMAN Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3
Length = 130
Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|P13912|H2A_CAIMO Histone H2A OS=Cairina moschata PE=3 SV=2
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|A9UMV8|H2AJ_RAT Histone H2A.J OS=Rattus norvegicus GN=H2afj PE=2 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q8R1M2|H2AJ_MOUSE Histone H2A.J OS=Mus musculus GN=H2afj PE=2 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q4R3X5|H2AJ_MACFA Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q9BTM1|H2AJ_HUMAN Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q3ZBX9|H2AJ_BOVIN Histone H2A.J OS=Bos taurus GN=H2AFJ PE=2 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|P02263|H2A4_CHICK Histone H2A-IV OS=Gallus gallus PE=1 SV=2
Length = 129
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|A3LXE7|H2A2_PICST Histone H2A.2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=HTA2 PE=3 SV=1
Length = 131
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 112 AKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGN 171
+ E S+ + L PV ++H LL K +V +Y+T+VLEY++A+IL+LAGN
Sbjct: 10 SSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGN 69
Query: 172 YVKNIRHVEVAQQDIKVAMYADKVL 196
++ + + + +++A+ D+ L
Sbjct: 70 AARDNKKSRIIPRHLQLAIRNDEEL 94
>sp|Q6BRG3|H2A2_DEBHA Histone H2A.2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=HTA2 PE=3 SV=3
Length = 131
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 112 AKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGN 171
+ E S+ + L PV ++H LL K +V +Y+T+VLEY++A+IL+LAGN
Sbjct: 10 SSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGN 69
Query: 172 YVKNIRHVEVAQQDIKVAMYADKVL 196
++ + + + +++A+ D+ L
Sbjct: 70 AARDNKKSRIIPRHLQLAIRNDEEL 94
>sp|P02262|H2A1_RAT Histone H2A type 1 OS=Rattus norvegicus PE=1 SV=2
Length = 130
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|A3LZZ0|H2A1_PICST Histone H2A.1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=HTA2 PE=3 SV=1
Length = 131
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 112 AKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGN 171
+ E S+ + L PV ++H LL K +V +Y+T+VLEY++A+IL+LAGN
Sbjct: 10 SSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGN 69
Query: 172 YVKNIRHVEVAQQDIKVAMYADKVL 196
++ + + + +++A+ D+ L
Sbjct: 70 AARDNKKSRIIPRHLQLAIRNDEEL 94
>sp|Q6BKW8|H2A1_DEBHA Histone H2A.1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=HTA1 PE=3 SV=3
Length = 130
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 112 AKEAIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGN 171
+ E S+ + L PV ++H LL K +V +Y+T+VLEY++A+IL+LAGN
Sbjct: 10 SSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGN 69
Query: 172 YVKNIRHVEVAQQDIKVAMYADKVL 196
++ + + + +++A+ D+ L
Sbjct: 70 AARDNKKSRIIPRHLQLAIRNDEEL 94
>sp|P0C169|H2A1C_RAT Histone H2A type 1-C OS=Rattus norvegicus PE=1 SV=2
Length = 130
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q93077|H2A1C_HUMAN Histone H2A type 1-C OS=Homo sapiens GN=HIST1H2AC PE=1 SV=3
Length = 130
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q6CK59|H2A_KLULA Histone H2A OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=HTA1 PE=3
SV=3
Length = 130
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K ++ +Y+TAVLEY++A+IL+LAGN ++ +
Sbjct: 16 QSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNK 75
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D L
Sbjct: 76 KTRIIPRHLQLAIRNDDEL 94
>sp|Q757L4|H2A2_ASHGO Histone H2A.2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=HTA2 PE=3 SV=3
Length = 131
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K ++ +Y+TAVLEY++A+IL+LAGN ++ +
Sbjct: 16 QSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNK 75
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D L
Sbjct: 76 KTRIIPRHLQLAIRNDDEL 94
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 29/34 (85%)
Query: 16 IGSPWRDRISLAILELQEKGTIQMLYDKWWKNTG 49
IGSP+RD+I++AIL+LQE+G + M+ +KWW+ G
Sbjct: 785 IGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNG 818
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 29/34 (85%)
Query: 16 IGSPWRDRISLAILELQEKGTIQMLYDKWWKNTG 49
IGSP+RD+I++AIL+LQE+G + M+ +KWW+ G
Sbjct: 785 IGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNG 818
>sp|P27661|H2AX_MOUSE Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2
Length = 143
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|P16104|H2AX_HUMAN Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2
Length = 143
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|P70082|H2AJ_CHICK Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q64523|H2A2C_MOUSE Histone H2A type 2-C OS=Mus musculus GN=Hist2h2ac PE=1 SV=3
Length = 129
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q16777|H2A2C_HUMAN Histone H2A type 2-C OS=Homo sapiens GN=HIST2H2AC PE=1 SV=4
Length = 129
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|A1A4R1|H2A2C_BOVIN Histone H2A type 2-C OS=Bos taurus GN=HIST2H2AC PE=2 SV=1
Length = 129
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|P0CC09|H2A2A_RAT Histone H2A type 2-A OS=Rattus norvegicus GN=Hist2h2aa3 PE=1 SV=1
Length = 130
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q6GSS7|H2A2A_MOUSE Histone H2A type 2-A OS=Mus musculus GN=Hist2h2aa1 PE=1 SV=3
Length = 130
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q6FI13|H2A2A_HUMAN Histone H2A type 2-A OS=Homo sapiens GN=HIST2H2AA3 PE=1 SV=3
Length = 130
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q8IUE6|H2A2B_HUMAN Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3
Length = 130
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAVRNDEEL 94
>sp|Q74ZL4|H2A1_ASHGO Histone H2A.1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=HTA1 PE=3 SV=3
Length = 131
Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K ++ +Y+TAVLEY++A+IL+LAGN ++ +
Sbjct: 16 QSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYMTAVLEYLAAEILELAGNAARDNK 75
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D L
Sbjct: 76 KTRIIPRHLQLAIRNDDEL 94
>sp|Q96QV6|H2A1A_HUMAN Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3
Length = 131
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV +IH LL K ++ +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAIRNDEEL 94
>sp|Q6GM86|H2AX_XENLA Histone H2A.x OS=Xenopus laevis GN=h2afx PE=1 SV=3
Length = 139
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A K++ + L PV ++H LL K ++V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAHRVGAGAPVYLAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKSRIIPRHLQLAVRNDEEL 94
>sp|Q64522|H2A2B_MOUSE Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3
Length = 130
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 115 AIEKSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVK 174
A KS+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN +
Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAAR 72
Query: 175 NIRHVEVAQQDIKVAMYADKVL 196
+ + + + +++A+ D+ L
Sbjct: 73 DNKKTRIIPRHLQLAVRNDEEL 94
>sp|Q875B8|H2A_PODAS Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3
Length = 135
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN ++ +
Sbjct: 18 QSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNK 77
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D+ L
Sbjct: 78 KTRIIPRHLQLAIRNDEEL 96
>sp|Q8X132|H2A_NEUCR Histone H2A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=hh2a PE=3 SV=3
Length = 134
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN ++ +
Sbjct: 18 QSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNK 77
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D+ L
Sbjct: 78 KTRIIPRHLQLAIRNDEEL 96
>sp|A1D8G8|H2A_NEOFI Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1
Length = 133
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 118 KSKKKISCLVLPVEKIHYLLSKDVLQYKVEMNVSIYITAVLEYISADILKLAGNYVKNIR 177
+S+ + L PV ++H LL K +V +Y+ AVLEY++A+IL+LAGN ++ +
Sbjct: 17 QSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNK 76
Query: 178 HVEVAQQDIKVAMYADKVL 196
+ + +++A+ D+ L
Sbjct: 77 KTRIIPRHLQLAIRNDEEL 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,373,931
Number of Sequences: 539616
Number of extensions: 8877434
Number of successful extensions: 25735
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 25264
Number of HSP's gapped (non-prelim): 510
length of query: 551
length of database: 191,569,459
effective HSP length: 123
effective length of query: 428
effective length of database: 125,196,691
effective search space: 53584183748
effective search space used: 53584183748
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)