Query psy14140
Match_columns 207
No_of_seqs 148 out of 2612
Neff 11.0
Searched_HMMs 29240
Date Fri Aug 16 20:33:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b93_B Ankyrin repeat domain-c 100.0 4.7E-37 1.6E-41 226.8 13.3 185 3-187 13-230 (269)
2 2xai_A ASB-9, ankyrin repeat a 100.0 3.5E-36 1.2E-40 221.3 17.5 184 2-207 4-192 (261)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 1.8E-36 6.2E-41 221.9 14.6 194 2-195 11-243 (253)
4 1oy3_D Transcription factor in 100.0 5.7E-36 1.9E-40 222.0 15.2 184 2-207 10-251 (282)
5 3aji_A 26S proteasome non-ATPa 100.0 1.5E-35 5E-40 214.0 15.5 195 2-196 7-226 (231)
6 3d9h_A CDNA FLJ77766, highly s 100.0 4.8E-35 1.6E-39 217.9 18.0 183 2-206 60-247 (285)
7 1wdy_A 2-5A-dependent ribonucl 100.0 8.7E-35 3E-39 215.6 18.9 200 2-207 40-279 (285)
8 2f8y_A Notch homolog 1, transl 100.0 9.3E-35 3.2E-39 208.7 18.5 183 2-206 26-216 (223)
9 2rfa_A Transient receptor pote 100.0 5.1E-35 1.8E-39 211.3 15.9 177 2-194 4-216 (232)
10 1k1a_A B-cell lymphoma 3-encod 100.0 2.7E-34 9.1E-39 208.5 19.4 190 2-191 10-232 (241)
11 3b7b_A Euchromatic histone-lys 100.0 1.7E-34 5.7E-39 209.2 17.9 189 2-190 12-225 (237)
12 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-35 4.1E-40 215.3 11.1 188 2-207 9-210 (236)
13 1n11_A Ankyrin; clathrin, BAND 100.0 2.8E-34 9.7E-39 225.3 18.0 171 31-207 193-370 (437)
14 2etb_A Transient receptor pote 100.0 3E-35 1E-39 215.7 11.2 181 2-194 3-240 (256)
15 3utm_A Tankyrase-1; tankyrase, 100.0 7.5E-34 2.6E-38 216.4 19.3 199 3-207 26-306 (351)
16 4gpm_A Engineered protein OR26 100.0 3.2E-34 1.1E-38 197.4 14.6 150 4-169 7-162 (169)
17 3hra_A Ankyrin repeat family p 100.0 2E-33 7E-38 198.7 17.3 181 2-204 6-201 (201)
18 2dzn_A Probable 26S proteasome 100.0 1.1E-33 3.8E-38 203.7 16.2 184 2-185 3-218 (228)
19 3kea_A K1L; tropism, ANK repea 100.0 2.5E-34 8.6E-39 214.0 13.0 180 2-207 32-221 (285)
20 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-33 5.4E-38 221.1 17.7 190 2-191 15-228 (437)
21 1wdy_A 2-5A-dependent ribonucl 100.0 3.1E-33 1.1E-37 207.2 17.9 198 3-206 7-245 (285)
22 4gpm_A Engineered protein OR26 100.0 4.2E-33 1.4E-37 191.8 17.0 149 52-206 6-161 (169)
23 3ljn_A Hypothetical protein; a 100.0 3.6E-34 1.2E-38 219.8 12.6 190 3-194 22-263 (364)
24 1s70_B 130 kDa myosin-binding 100.0 1.3E-33 4.4E-38 211.2 15.1 183 3-207 42-258 (299)
25 1k1a_A B-cell lymphoma 3-encod 100.0 3.5E-34 1.2E-38 207.8 11.3 171 31-207 23-209 (241)
26 4g8k_A 2-5A-dependent ribonucl 100.0 3E-33 1E-37 212.7 16.2 191 3-193 61-291 (337)
27 3eu9_A Huntingtin-interacting 100.0 5.3E-33 1.8E-37 201.3 16.6 193 2-194 10-229 (240)
28 2pnn_A Transient receptor pote 100.0 4.4E-34 1.5E-38 211.3 10.6 188 2-207 14-260 (273)
29 2fo1_E LIN-12 protein; beta-ba 100.0 3.1E-33 1.1E-37 215.4 15.6 198 2-205 126-370 (373)
30 3b7b_A Euchromatic histone-lys 100.0 8.7E-33 3E-37 200.2 16.3 172 30-207 24-203 (237)
31 4b93_B Ankyrin repeat domain-c 100.0 1.5E-32 5.1E-37 202.7 16.7 183 15-207 13-211 (269)
32 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-32 4.8E-37 202.1 15.0 167 2-186 37-210 (261)
33 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-32 3.8E-37 212.3 14.9 172 30-207 146-339 (373)
34 1oy3_D Transcription factor in 100.0 1.8E-32 6.3E-37 203.1 15.5 172 2-189 46-272 (282)
35 3jxi_A Vanilloid receptor-rela 100.0 3.4E-33 1.2E-37 205.1 11.0 186 3-206 7-250 (260)
36 3d9h_A CDNA FLJ77766, highly s 100.0 5.9E-32 2E-36 201.2 14.7 176 2-203 93-275 (285)
37 2dzn_A Probable 26S proteasome 100.0 4.3E-32 1.5E-36 195.4 13.4 172 30-207 15-201 (228)
38 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-31 6.5E-36 195.2 15.4 173 29-207 35-216 (253)
39 2f8y_A Notch homolog 1, transl 100.0 3.2E-31 1.1E-35 190.2 13.8 171 31-207 5-184 (223)
40 3ljn_A Hypothetical protein; a 100.0 1.9E-32 6.6E-37 210.2 7.8 190 2-191 54-305 (364)
41 3utm_A Tankyrase-1; tankyrase, 100.0 7.6E-31 2.6E-35 199.8 16.2 171 31-207 38-273 (351)
42 3aji_A 26S proteasome non-ATPa 100.0 2.9E-30 9.9E-35 186.2 18.4 181 17-207 10-198 (231)
43 2rfm_A Putative ankyrin repeat 100.0 4.2E-30 1.4E-34 180.5 15.3 155 43-197 28-189 (192)
44 1sw6_A Regulatory protein SWI6 100.0 2.6E-31 8.8E-36 201.3 9.7 165 2-186 132-327 (327)
45 4hbd_A KN motif and ankyrin re 100.0 3.7E-31 1.3E-35 196.0 10.0 179 2-194 77-269 (276)
46 3v30_A DNA-binding protein rfx 100.0 1.5E-30 5.1E-35 179.7 12.4 161 2-178 3-171 (172)
47 4g8k_A 2-5A-dependent ribonucl 100.0 6.6E-30 2.3E-34 194.2 16.8 179 3-207 127-327 (337)
48 1s70_B 130 kDa myosin-binding 100.0 5.1E-31 1.7E-35 197.1 8.8 167 2-184 74-274 (299)
49 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.4E-30 2.5E-34 174.5 13.1 153 3-206 7-162 (162)
50 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.1E-29 7.3E-34 173.5 14.3 145 50-194 14-165 (169)
51 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.3E-29 7.8E-34 172.1 14.4 118 82-206 5-128 (162)
52 3v31_A Ankyrin repeat family A 100.0 2.3E-29 7.8E-34 173.0 13.7 150 3-196 5-156 (167)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-28 4E-33 169.8 16.5 149 14-166 15-169 (169)
54 2rfm_A Putative ankyrin repeat 100.0 2.5E-29 8.6E-34 176.6 13.1 149 2-166 36-190 (192)
55 3v31_A Ankyrin repeat family A 100.0 1.5E-28 5.3E-33 168.8 16.4 121 81-207 2-128 (167)
56 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-29 3.7E-34 183.9 9.0 168 2-185 46-229 (236)
57 3kea_A K1L; tropism, ANK repea 100.0 2.1E-29 7.3E-34 187.4 10.5 162 30-195 13-181 (285)
58 3eu9_A Huntingtin-interacting 100.0 6.5E-28 2.2E-32 174.4 17.6 181 17-207 13-203 (240)
59 1awc_B Protein (GA binding pro 100.0 2.5E-28 8.4E-33 165.5 14.4 143 51-194 3-152 (153)
60 3v30_A DNA-binding protein rfx 100.0 3E-28 1E-32 168.1 14.1 147 51-197 3-157 (172)
61 3hra_A Ankyrin repeat family p 100.0 3.6E-28 1.2E-32 171.7 14.2 149 2-166 40-201 (201)
62 3f6q_A Integrin-linked protein 100.0 3.7E-28 1.3E-32 168.8 13.5 154 48-207 3-164 (179)
63 1awc_B Protein (GA binding pro 100.0 5.1E-28 1.7E-32 163.9 13.2 144 2-162 3-152 (153)
64 1sw6_A Regulatory protein SWI6 100.0 1.3E-28 4.3E-33 186.6 10.9 134 68-207 116-309 (327)
65 2vge_A RELA-associated inhibit 100.0 1.4E-31 4.9E-36 193.1 -5.2 172 3-193 23-206 (229)
66 2rfa_A Transient receptor pote 100.0 1.9E-27 6.5E-32 171.6 16.4 156 50-207 3-184 (232)
67 3f6q_A Integrin-linked protein 100.0 5E-28 1.7E-32 168.2 12.0 152 2-169 6-164 (179)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.3E-29 1.1E-33 181.9 6.1 169 2-187 6-193 (239)
69 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-27 4.3E-32 163.9 13.0 153 46-205 4-164 (165)
70 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.9E-27 6.6E-32 161.5 13.7 144 3-192 4-150 (156)
71 4hbd_A KN motif and ankyrin re 99.9 2.6E-27 8.8E-32 175.4 13.9 149 2-166 112-273 (276)
72 2pnn_A Transient receptor pote 99.9 3E-28 1E-32 180.0 8.2 173 2-179 55-271 (273)
73 1d9s_A Cyclin-dependent kinase 99.9 2.3E-27 7.9E-32 157.7 11.7 128 72-206 2-136 (136)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.6E-27 1.6E-31 159.6 13.2 112 82-194 2-120 (156)
75 3twr_A Tankyrase-2; ankyrin re 99.9 9.5E-28 3.2E-32 164.5 9.7 150 2-167 9-164 (165)
76 2etb_A Transient receptor pote 99.9 5.3E-28 1.8E-32 177.0 7.0 152 2-169 44-247 (256)
77 3jxi_A Vanilloid receptor-rela 99.9 1.4E-27 4.8E-32 175.1 8.6 163 2-169 47-251 (260)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-26 3.5E-31 168.7 9.3 151 48-199 3-163 (239)
79 1d9s_A Cyclin-dependent kinase 99.9 1.1E-25 3.9E-30 149.5 10.2 128 40-168 2-136 (136)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 7.7E-26 2.6E-30 153.7 9.4 134 3-181 14-150 (156)
81 3c5r_A BARD-1, BRCA1-associate 99.9 8.7E-26 3E-30 150.2 8.7 124 72-196 1-130 (137)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.2E-24 7.4E-29 141.0 14.8 120 81-206 1-126 (126)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 3.9E-25 1.3E-29 150.2 10.3 126 75-207 5-137 (156)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-24 4.2E-29 144.4 11.4 116 79-194 11-132 (136)
85 3t8k_A Uncharacterized protein 99.9 3.7E-25 1.3E-29 154.5 9.0 144 3-164 8-175 (186)
86 2vge_A RELA-associated inhibit 99.9 4.4E-26 1.5E-30 164.3 4.0 154 33-186 1-167 (229)
87 3t8k_A Uncharacterized protein 99.9 3.2E-25 1.1E-29 154.8 5.8 148 50-199 6-178 (186)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 3.5E-23 1.2E-27 137.4 12.9 120 47-166 11-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-22 3.5E-27 133.0 13.7 119 50-168 2-126 (126)
90 3ui2_A Signal recognition part 99.9 7.8E-24 2.7E-28 154.0 9.0 134 3-166 47-183 (244)
91 3deo_A Signal recognition part 99.9 9.8E-24 3.4E-28 147.0 8.9 130 48-194 42-178 (183)
92 3aaa_C Myotrophin, protein V-1 99.9 2E-23 6.8E-28 136.2 8.4 107 79-185 4-116 (123)
93 3ui2_A Signal recognition part 99.9 1.2E-23 4E-28 153.1 7.3 158 3-196 17-181 (244)
94 3deo_A Signal recognition part 99.9 5.7E-24 2E-28 148.2 4.6 114 80-194 42-162 (183)
95 3ehr_A Osteoclast-stimulating 99.9 2.7E-23 9.1E-28 149.0 7.6 116 79-194 70-192 (222)
96 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-22 3.9E-27 152.1 10.2 132 52-188 153-299 (301)
97 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-23 5.9E-28 139.0 4.9 126 40-166 1-132 (137)
98 2aja_A Ankyrin repeat family p 99.9 7.7E-26 2.6E-30 173.6 -7.8 147 3-166 94-248 (376)
99 3aaa_C Myotrophin, protein V-1 99.9 8.5E-23 2.9E-27 133.2 7.4 110 3-128 9-120 (123)
100 2b0o_E UPLC1; arfgap, structur 99.9 3.8E-22 1.3E-26 149.2 6.1 131 4-156 154-299 (301)
101 3ehr_A Osteoclast-stimulating 99.9 9E-22 3.1E-26 141.0 7.1 124 46-169 69-199 (222)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.3E-20 7.8E-25 115.6 11.6 82 81-190 1-83 (93)
103 2aja_A Ankyrin repeat family p 99.8 4.4E-24 1.5E-28 163.9 -6.7 155 31-199 80-249 (376)
104 1dcq_A PYK2-associated protein 99.8 2.5E-20 8.4E-25 137.9 13.5 117 84-206 132-263 (278)
105 3lvq_E ARF-GAP with SH3 domain 99.8 1.4E-20 4.7E-25 149.9 12.7 118 52-169 134-266 (497)
106 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-20 8E-25 148.6 13.3 121 81-207 131-266 (497)
107 1dcq_A PYK2-associated protein 99.8 3.1E-20 1.1E-24 137.4 12.9 167 3-169 68-264 (278)
108 3jue_A Arfgap with coiled-coil 99.8 3.2E-20 1.1E-24 142.0 12.9 136 50-185 199-347 (368)
109 3jue_A Arfgap with coiled-coil 99.8 1.8E-20 6.1E-25 143.4 11.1 117 81-197 198-323 (368)
110 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-20 8.6E-25 119.9 8.6 103 77-179 4-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.8E-20 2.7E-24 113.2 10.3 48 143-190 2-50 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.3E-19 1.1E-23 114.6 4.9 99 3-117 11-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.9E-18 9.9E-23 109.4 8.0 91 76-194 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.5E-16 5.2E-21 101.3 6.0 88 44-131 18-107 (110)
115 1gp8_A Protein (scaffolding pr 57.9 9.7 0.00033 18.3 2.3 18 85-102 16-33 (40)
116 3qil_A Clathrin heavy chain 1; 47.9 6.7 0.00023 24.6 1.1 23 4-26 38-60 (125)
117 2k53_A A3DK08 protein; NESG, C 44.8 19 0.00065 20.3 2.6 48 155-202 16-64 (76)
118 3fxd_A Protein ICMQ; helix bun 36.2 29 0.00099 18.2 2.2 24 178-201 16-39 (57)
119 4g26_A Pentatricopeptide repea 31.6 49 0.0017 26.2 4.0 130 27-165 43-200 (501)
No 1
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=226.77 Aligned_cols=185 Identities=21% Similarity=0.270 Sum_probs=162.2
Q ss_pred CcceeehccCChhHHHHHhhccchhh--------------------------HHHHHHHHHHcCCCCCchhhcccchhhh
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLM--------------------------LSNCLSLLVQHGTLPDYHEEAKLHGKLH 56 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~--------------------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~ 56 (207)
+||+.||.+|+.++|+.|++.+.... ...+++.|+++|+++|..+..|.+|+++
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~ 92 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV 92 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 68999999999999999998665310 1247899999999999999999999999
Q ss_pred hhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hh
Q psy14140 57 GCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VR 130 (207)
Q Consensus 57 a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~ 130 (207)
|+..++..++. |++.|++++..+..|.||+++|+..++.+++++|++.|+++ .+|..|.||||+|+..|+.+ |+
T Consensus 93 A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll 172 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL 172 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999988877 77999999999999999999999999999999999999999 99999999999999999876 67
Q ss_pred hcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCC
Q psy14140 131 DQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQ 187 (207)
Q Consensus 131 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~ 187 (207)
+.|++++..+..|.||||+|+..|+.+++++|+++|+++ .+|..|+||||+|+++++
T Consensus 173 ~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 173 QHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 899999999999999999999999999999999999999 699999999999987764
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=221.33 Aligned_cols=184 Identities=25% Similarity=0.305 Sum_probs=136.7
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+..|+.++ +++|+++|+++|..+..+.+|++.|+..++..+.. |++.|++++..|.
T Consensus 4 ~t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 67 (261)
T 2xai_A 4 WSPMHEAAIHGHQLS----------------LRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 67 (261)
T ss_dssp CCHHHHHHHHTCHHH----------------HHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 489999999999986 66677777777777777777777777777766655 5677777777777
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHA 156 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~ 156 (207)
.|.||||+|+..|+.+++++|++.|+++..+..|.||+|+|+..++.+ +++.|.+++..+..|.||||+|+..|+.
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 68 DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH
Confidence 777777777777777777777777777644555777777777777765 4567777777777777777777777777
Q ss_pred HHHHHHHHhCCCccCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 157 DCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+++++|+++|+++..+..|.||||+|+..++.++ ++.|++.|++|
T Consensus 148 ~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~------v~~Ll~~gad~ 192 (261)
T 2xai_A 148 ACVKKLLESGADVNQGKGQDSPLHAVARTASEEL------ACLLMDFGADT 192 (261)
T ss_dssp HHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHH------HHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHH------HHHHHHcCCCC
Confidence 7777777777777656677777777777777766 55566666654
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.8e-36 Score=221.86 Aligned_cols=194 Identities=20% Similarity=0.244 Sum_probs=151.9
Q ss_pred CCcceeehccC-------------ChhHHHHHhhccchhh------------------HHHHHHHHHHcCCCCCchhhcc
Q psy14140 2 AHPLFIRAVSG-------------DVKCSSQAGSMGDRLM------------------LSNCLSLLVQHGTLPDYHEEAK 50 (207)
Q Consensus 2 ~tpl~~Aa~~g-------------~~~~~~~~~~~~~~~~------------------~~~~v~~ll~~g~~~~~~~~~~ 50 (207)
.||||+|+.+| +.++++.+++.+.... ..+++++|+++|++++..+..+
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g 90 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMG 90 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 48999999988 8999998887655421 1379999999999999999999
Q ss_pred cchhhhhhhccCCchHH-HHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChH
Q psy14140 51 LHGKLHGCTCRKGESTK-VRDQGV-DPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQM 127 (207)
Q Consensus 51 ~~~~~~a~~~~~~~~~~-ll~~g~-~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~ 127 (207)
.+|++.|+..++..+.. |++.+. +++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 170 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 170 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 99999999999888776 667776 89999999999999999999999999999999998 8899999999999999987
Q ss_pred H----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHH
Q psy14140 128 E----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSP 195 (207)
Q Consensus 128 ~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~ 195 (207)
+ |++.|++++..+..|.||||+|+..|+.+++++|+++|+++ .++..|+||+++|+++|+.+++++|.
T Consensus 171 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 171 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 7 56899999999999999999999999999999999999999 68999999999999999999976664
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.7e-36 Score=221.97 Aligned_cols=184 Identities=21% Similarity=0.264 Sum_probs=127.5
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCC---CCchhhcccchhhhhhhccCCchHH-HHhcCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTL---PDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNL 77 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~---~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~ 77 (207)
.||||+|+..|+.++ +++|+++|++ ++..+..+.+|+++|+..++..++. |++.|++++.
T Consensus 10 ~t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 73 (282)
T 1oy3_D 10 DTALHLAVIHQHEPF----------------LDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV 73 (282)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred CcHHHHHHHcCCHHH----------------HHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 489999999999986 5555555555 5566666777777777777666655 5577777777
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-----------------------------------------------c-C
Q psy14140 78 KDGDGATPLHFAASRGHADCVRWLLRYGGK-----------------------------------------------L-V 109 (207)
Q Consensus 78 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----------------------------------------------~-~ 109 (207)
++..|.||||+|+..++.+++++|++.+.. + .
T Consensus 74 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T 1oy3_D 74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153 (282)
T ss_dssp CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC
T ss_pred CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC
Confidence 777777777777777777777777766543 2 3
Q ss_pred CCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCC-CCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHH
Q psy14140 110 PDKFGKSPINDAAENQQME----VRDQGVDPNLKDGD-GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAA 183 (207)
Q Consensus 110 ~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~ 183 (207)
.+..|.||||+|+..++.+ |++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ .++..|+||||+|+
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 233 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHH
Confidence 4556777777777777665 44567777766643 777777777777777777777777777 56667777777777
Q ss_pred HcCCcceeehHHHHHHHhhcccCC
Q psy14140 184 ENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 184 ~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
..++.++ ++.|++.|++|
T Consensus 234 ~~~~~~~------v~~Ll~~ga~~ 251 (282)
T 1oy3_D 234 LRPNPIL------ARLLRAHGAPE 251 (282)
T ss_dssp TSSCHHH------HHHHHHTTCCC
T ss_pred HcCCcHH------HHHHHHcCCCc
Confidence 7776665 56666666654
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.5e-35 Score=214.01 Aligned_cols=195 Identities=21% Similarity=0.297 Sum_probs=176.8
Q ss_pred CCcceeehccCChhHHHHHhhccchhh------------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM------------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKG 63 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~------------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~ 63 (207)
.||||.|+.+|+.+.++.+++...... ..+++++|+++|++++..+..+.+|++.|+..++.
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 86 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXD 86 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHH
Confidence 479999999999999999887654311 13899999999999999999999999999999998
Q ss_pred chHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCC
Q psy14140 64 ESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPN 137 (207)
Q Consensus 64 ~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~ 137 (207)
.+.. |++.|++++.++..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|++++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 166 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Confidence 8776 77999999999999999999999999999999999999999 88999999999999999887 567999999
Q ss_pred CCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHH
Q psy14140 138 LKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPV 196 (207)
Q Consensus 138 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~ 196 (207)
..+..|.||||+|+..++.+++++|+++|+++ .++..|+|||++|...++.+++++|..
T Consensus 167 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 99999999999999999999999999999999 689999999999999988888555543
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=217.86 Aligned_cols=183 Identities=25% Similarity=0.302 Sum_probs=112.2
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+||..|+.++ +++|+++|++++..+..+.+|+++|+..++..+.. |++.|++++..|.
T Consensus 60 ~t~L~~Aa~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLS----------------LRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 489999999999986 55555556666666666666666666655555544 4455666666666
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHA 156 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~ 156 (207)
.|.||||+|+..++.+++++|++.|.++..+..|.||||+|+..++.+ +++.|.+++..+..|.||||+|+..|+.
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 666666666666666666666666655533344666666666666554 3455666666666666666666666666
Q ss_pred HHHHHHHHhCCCccCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 157 DCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 157 ~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
+++++|++.|+++..+..|.||||+|+..++.++ ++.|++.|++
T Consensus 204 ~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~~gad 247 (285)
T 3d9h_A 204 ACVKKLLESGADVNQGKGQDSPLHAVVRTASEEL------ACLLMDFGAD 247 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHH------HHHHHHTTCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHH------HHHHHHCCCC
Confidence 6666666666665445556666666666665554 4444444444
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.7e-35 Score=215.57 Aligned_cols=200 Identities=22% Similarity=0.253 Sum_probs=168.8
Q ss_pred CCcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCc
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGE 64 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~ 64 (207)
.||||+|+..|+.++++.+++.+.... ..+++++|+++|++++..+..+.+|++.|+..++..
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 119 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHH
Confidence 378888888888888888887665421 137888899999888888888888888888888877
Q ss_pred hHH-HHhcCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHh-CCCc-CCCCCCCcHHHHHHhcCh----H
Q psy14140 65 STK-VRDQGVDPNLK----------DGDGATPLHFAASRGHADCVRWLLRY-GGKL-VPDKFGKSPINDAAENQQ----M 127 (207)
Q Consensus 65 ~~~-ll~~g~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~-~~~~~g~~~l~~a~~~~~----~ 127 (207)
+.. |++.|++++.. +..|.||||+|+..++.+++++|++. +.++ ..+..|.||+|+|+..+. .
T Consensus 120 ~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 199 (285)
T 1wdy_A 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 199 (285)
T ss_dssp HHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHH
T ss_pred HHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHH
Confidence 766 67888888877 67788999999999999999999887 7777 888889999999988777 4
Q ss_pred H----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH-hCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHh
Q psy14140 128 E----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLR-YGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLL 201 (207)
Q Consensus 128 ~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll 201 (207)
+ +++.|++++..+..|.||||+|+..|+.+++++|++ .|+++ .++..|+||||+|+..++.++ ++.|+
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i------~~~Ll 273 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI------AELLC 273 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHH------HHHHH
Confidence 4 567899999999999999999999999999999998 78888 688899999999999998887 78888
Q ss_pred hcccCC
Q psy14140 202 TIQKVP 207 (207)
Q Consensus 202 ~~~~~p 207 (207)
+.|++|
T Consensus 274 ~~Ga~~ 279 (285)
T 1wdy_A 274 KRGAST 279 (285)
T ss_dssp HHSSCS
T ss_pred HcCCCC
Confidence 888876
No 8
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=9.3e-35 Score=208.71 Aligned_cols=183 Identities=19% Similarity=0.240 Sum_probs=168.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCC-CCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGV-DPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~-~~~~~~ 79 (207)
.||||+|+.+|+.++ +++|+++|++++..+..+.+|++.|+..++..+.. |++.+. +++..+
T Consensus 26 ~t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 89 (223)
T 2f8y_A 26 ETALHLAARYSRSDA----------------AKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 89 (223)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC
T ss_pred CchHHHHHHcCCHHH----------------HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 489999999999874 88899999999999999999999999999988877 667776 899999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCC
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRG 154 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~ 154 (207)
..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.+ +++.|++++..+..|.||||+|+..+
T Consensus 90 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 90 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 169 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC
Confidence 99999999999999999999999999999 88999999999999999887 56789999999999999999999999
Q ss_pred CHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 155 HADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 155 ~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
+.+++++|+++|+++ .++..|.||+++|+..++.++ ++.|++.|+.
T Consensus 170 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i------~~~L~~~g~~ 216 (223)
T 2f8y_A 170 SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI------VRLLDEYNLV 216 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH------HHHHHHTTCS
T ss_pred CHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHH------HHHHHHcCCC
Confidence 999999999999999 688999999999999999998 6666776654
No 9
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.1e-35 Score=211.33 Aligned_cols=177 Identities=23% Similarity=0.279 Sum_probs=159.4
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHc-CCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCC----
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQH-GTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDP---- 75 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~-g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~---- 75 (207)
.||||+|+..|+.++ ++.|++. |++++..+..+.+|++.|+..++..+.. |++.|+++
T Consensus 4 ~t~L~~A~~~g~~~~----------------v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 67 (232)
T 2rfa_A 4 ESPLLLAAKENDVQA----------------LSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP 67 (232)
T ss_dssp TCHHHHHHHTTCHHH----------------HHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc
Confidence 589999999999985 7778876 9999999999999999999999988776 77888887
Q ss_pred -CCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCC-------------CCCcHHHHHHhcChHH----HhhcCCCC
Q psy14140 76 -NLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDK-------------FGKSPINDAAENQQME----VRDQGVDP 136 (207)
Q Consensus 76 -~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~-------------~g~~~l~~a~~~~~~~----l~~~~~~~ 136 (207)
+..|..|.||||+|+..++.+++++|++.|.++ ..+. .|.||||+|+..++.+ |++.|+++
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 777889999999999999999999999999988 5544 7999999999999887 56899999
Q ss_pred CCCCCCCCcHHHHHHHCCCHHHH----HHHHHhCCCc-------cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 137 NLKDGDGATPLHFAASRGHADCV----RWLLRYGGKL-------VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 137 ~~~~~~g~t~l~~a~~~~~~~~~----~~Ll~~g~~~-------~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
+..|..|.||||+|+..++.+++ ++|+++|+++ .++..|+||||+|+..|+.+++++|
T Consensus 148 ~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L 216 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999988 9999999876 4788999999999999999985444
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.7e-34 Score=208.49 Aligned_cols=190 Identities=26% Similarity=0.400 Sum_probs=111.8
Q ss_pred CCcceeehccCChhHHHHHhhc----cch-----------------hhHHHHHHHHHHcCCCCCchhhcccchhhhhhhc
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSM----GDR-----------------LMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTC 60 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~----~~~-----------------~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~ 60 (207)
.||||+|+.+|+.++++.+++. +.. ....+++++|+++|++++..+..+.+|++.|+..
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 89 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH 89 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 4899999999999998876652 111 0012555666666666655555555566555555
Q ss_pred cCCchHH-HHhcCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC-CCCCcHHHHHHhcChHH----H
Q psy14140 61 RKGESTK-VRDQGV----DPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPD-KFGKSPINDAAENQQME----V 129 (207)
Q Consensus 61 ~~~~~~~-ll~~g~----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~-~~g~~~l~~a~~~~~~~----l 129 (207)
++..+.. |++.+. +++..+..|.||||+|+..++.+++++|++.|.++ ..+ ..|.||||+|+..++.+ +
T Consensus 90 ~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 169 (241)
T 1k1a_A 90 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169 (241)
T ss_dssp TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHH
Confidence 5555444 444444 55555555666666666666666666666665555 333 45556666666555554 3
Q ss_pred hhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCccee
Q psy14140 130 RDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVS 191 (207)
Q Consensus 130 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~ 191 (207)
++.|++++..+..|.||||+|+..|+.+++++|+++|+++ .++..|+|||++|+..|+.+++
T Consensus 170 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 170 LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHH
Confidence 3455555555556666666666666666666666666655 4555566666666555555553
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.7e-34 Score=209.20 Aligned_cols=189 Identities=24% Similarity=0.306 Sum_probs=163.4
Q ss_pred CCcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCc
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGE 64 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~ 64 (207)
.||||+|+..|+.++++.+++.+.... ..+++++|+++|++++..+..+.+|++.|+..++..
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 91 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYE 91 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 489999999999999999888765421 137899999999999988888899999988888877
Q ss_pred hHH-HHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCC
Q psy14140 65 STK-VRDQG-VDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPN 137 (207)
Q Consensus 65 ~~~-ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~ 137 (207)
+.. |++.| .+++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|++++
T Consensus 92 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 92 VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp HHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred HHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 776 66777 788888889999999999999999999999999888 88888999999999988877 567889999
Q ss_pred CCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcce
Q psy14140 138 LKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEV 190 (207)
Q Consensus 138 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~ 190 (207)
..+..|.||||+|+..++.+++++|+++|+++ .++..|+|||++|+.+++.+.
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998 688889999999998887653
No 12
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.2e-35 Score=215.29 Aligned_cols=188 Identities=19% Similarity=0.229 Sum_probs=167.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+..|+.++++.+++.+.. .++++|..+..+.+|++.|+..++..+.. |++.|++++.+|.
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 76 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKG------------DLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF 76 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----------------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT
T ss_pred CchhHHHHHcCChhHHHHHHHHhhc------------cHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 4899999999999987776666554 56789999999999999999999988877 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCC------c-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCC-CCCcHHH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGK------L-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDG-DGATPLH 148 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~------~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~-~g~t~l~ 148 (207)
.|.||||+|+..++.+++++|++.+.. . ..+..|.||||+|+..++.+ |++.|++++..+. .|.||||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 999999999999999999999999864 2 67888999999999999887 5689999999997 9999999
Q ss_pred HHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 149 FAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 149 ~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+|+..|+.+++++|+++|+++ .++..|+|||++|+..++.++ ++.|++.|++|
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~------~~~Ll~~ga~~ 210 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRI------QQQLGQLTLEN 210 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHH------HHHHHTTSCGG
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHH------HHHHHHcchhh
Confidence 999999999999999999999 689999999999999999987 77888888754
No 13
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-34 Score=225.32 Aligned_cols=171 Identities=27% Similarity=0.382 Sum_probs=90.8
Q ss_pred HHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-
Q psy14140 31 NCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL- 108 (207)
Q Consensus 31 ~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~- 108 (207)
+++++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..|+.+++++|++.+.++
T Consensus 193 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 272 (437)
T 1n11_A 193 DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 272 (437)
T ss_dssp HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 4455555555555554445555555555544444433 44555555555555555555555555555555555555555
Q ss_pred CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHH
Q psy14140 109 VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAA 183 (207)
Q Consensus 109 ~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~ 183 (207)
..+..|.||||+|+..++.+ +++.|++++..+..|.||||+|+..|+.+++++|+++|+++ .++..|+||||+|+
T Consensus 273 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~ 352 (437)
T 1n11_A 273 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAA 352 (437)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 45555555555555555544 33455555555555555555555555555555555555555 35555555555555
Q ss_pred HcCCcceeehHHHHHHHhhcccCC
Q psy14140 184 ENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 184 ~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
..|+.++ ++.|++.|++|
T Consensus 353 ~~g~~~i------v~~Ll~~ga~~ 370 (437)
T 1n11_A 353 QQGHTDI------VTLLLKNGASP 370 (437)
T ss_dssp HTTCHHH------HHHHHHTTCCS
T ss_pred HCChHHH------HHHHHHCcCCC
Confidence 5555544 44455555443
No 14
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3e-35 Score=215.66 Aligned_cols=181 Identities=19% Similarity=0.199 Sum_probs=160.2
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCc----hhhcccchhhhhhhc---cCCchHH-HHhcCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDY----HEEAKLHGKLHGCTC---RKGESTK-VRDQGV 73 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~----~~~~~~~~~~~a~~~---~~~~~~~-ll~~g~ 73 (207)
.||||.|+..|+.++++ .++++|+++|++++. .+..+.+|+++|+.. ++..+.. |++.|+
T Consensus 3 ~t~L~~A~~~g~~~~v~------------~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~ 70 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELT------------GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDK 70 (256)
T ss_dssp HHHHHHHHHHTCGGGGT------------THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHH------------HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCC
Confidence 37999999999999755 467888999999998 899999999999998 8877776 778888
Q ss_pred CCCCC-----------CCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCC-------------CCcHHHHHHhcChHH
Q psy14140 74 DPNLK-----------DGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKF-------------GKSPINDAAENQQME 128 (207)
Q Consensus 74 ~~~~~-----------~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~-------------g~~~l~~a~~~~~~~ 128 (207)
+++.. |..|.||||+|+..|+.+++++|++.|+++ ..+.. |.||||+|+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~ 150 (256)
T 2etb_A 71 DSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWD 150 (256)
T ss_dssp HTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHH
T ss_pred cccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 77643 367999999999999999999999999998 66665 999999999999887
Q ss_pred ----Hhh---cCCCCCCCCCCCCcHHHHHHH--CCCHH-------HHHHHHHhCCCc-------c-CCCCCCCHHHHHHH
Q psy14140 129 ----VRD---QGVDPNLKDGDGATPLHFAAS--RGHAD-------CVRWLLRYGGKL-------V-PDKFGKSPINDAAE 184 (207)
Q Consensus 129 ----l~~---~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~-------~-~~~~g~t~l~~a~~ 184 (207)
|++ .|++++..|..|+||||+|+. .++.+ ++++|+++|+++ . ++..|+||||+|+.
T Consensus 151 ~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 151 VVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHH
Confidence 567 899999999999999999998 78888 999999999888 4 78899999999999
Q ss_pred cCCcceeehH
Q psy14140 185 NQQMEVSTVS 194 (207)
Q Consensus 185 ~~~~~~~~~l 194 (207)
.|+.+++++|
T Consensus 231 ~g~~~~v~~L 240 (256)
T 2etb_A 231 EGKIEIFRHI 240 (256)
T ss_dssp TTCHHHHHHH
T ss_pred hCCHHHHHHH
Confidence 9999985444
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.5e-34 Score=216.43 Aligned_cols=199 Identities=26% Similarity=0.293 Sum_probs=173.8
Q ss_pred CcceeehccCChhHHHHHhhccch------------------hhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCc
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDR------------------LMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGE 64 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~------------------~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~ 64 (207)
||||.||.+|+.+.++.++..... ....+++++|+++|++++..+..+.+|+++|+..++..
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 678889999999888877764211 11137899999999999999999999999999999988
Q ss_pred hHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CC--------------------------------
Q psy14140 65 STK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VP-------------------------------- 110 (207)
Q Consensus 65 ~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~-------------------------------- 110 (207)
+.. |++.|++++..+..|.||||+|+..++.+++++|++.|.++ ..
T Consensus 106 iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 185 (351)
T 3utm_A 106 VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQA 185 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHH
Confidence 877 77999999999999999999999999999999999998876 33
Q ss_pred ----------------------CCCCCcHHHHHHhcC---hHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHH
Q psy14140 111 ----------------------DKFGKSPINDAAENQ---QME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRW 161 (207)
Q Consensus 111 ----------------------~~~g~~~l~~a~~~~---~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 161 (207)
+..|.||+|+|+..+ ..+ +++.|++++..+..|.||||+|+..|+.+++++
T Consensus 186 ~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 265 (351)
T 3utm_A 186 AREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEV 265 (351)
T ss_dssp HHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 355778999998884 333 568999999999999999999999999999999
Q ss_pred HHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 162 LLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 162 Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+++|+++ .++..|+||||+|+..|+.++ ++.|++.|++|
T Consensus 266 Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~------v~~Ll~~gad~ 306 (351)
T 3utm_A 266 LHKHGAKMNALDSLGQTALHRAALAGHLQT------CRLLLSYGSDP 306 (351)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHH------HHHHHHTTCCT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCcHHH------HHHHHHcCCCC
Confidence 99999999 689999999999999999887 78888888876
No 16
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.2e-34 Score=197.42 Aligned_cols=150 Identities=33% Similarity=0.510 Sum_probs=90.1
Q ss_pred cceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCC
Q psy14140 4 PLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDG 82 (207)
Q Consensus 4 pl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g 82 (207)
+|+.||.+|+.++ |+.|+++|+++|..+..+.+|++.|+..++..+.. +++.|++++.+|..|
T Consensus 7 ~L~~Aa~~G~~~~----------------v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g 70 (169)
T 4gpm_A 7 RLIEAAENGNKDR----------------VKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70 (169)
T ss_dssp HHHHHHHTTCHHH----------------HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHcCCHHH----------------HHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCC
Confidence 4666777777663 66677777777777777777777776666666555 557777777777777
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHH
Q psy14140 83 ATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHAD 157 (207)
Q Consensus 83 ~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 157 (207)
.||||+|+..|+.+++++|++.|+++ .+|..|+||||+|+..++.+ |++.|++++..|..|+|||++|+..|+.+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 77777777777777777777766655 44555555555555554444 23445555555555555555555555555
Q ss_pred HHHHHHHhCCCc
Q psy14140 158 CVRWLLRYGGKL 169 (207)
Q Consensus 158 ~~~~Ll~~g~~~ 169 (207)
++++|+++|+++
T Consensus 151 iv~~Ll~~GA~i 162 (169)
T 4gpm_A 151 VVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHTC----
T ss_pred HHHHHHHCCCCc
Confidence 555555555444
No 17
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2e-33 Score=198.66 Aligned_cols=181 Identities=21% Similarity=0.297 Sum_probs=160.8
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCC-CCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGT-LPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~ 79 (207)
.||||.|+..|+.+. ++.+++.+. +++..+..+.+|++.|+..++..+.. |++.|++++..+
T Consensus 6 ~~~L~~A~~~g~~~~----------------v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 69 (201)
T 3hra_A 6 VGALLEAANQRDTKK----------------VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69 (201)
T ss_dssp TTHHHHHHHTTCHHH----------------HHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred ccHHHHHHHhccHHH----------------HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 489999999999986 555555554 89999999999999999999988877 779999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHh-CCCc-CCCCCCCcHHHHHHhcChHH----HhhcC-CCCCCCCCCCCcHHHHHHH
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRY-GGKL-VPDKFGKSPINDAAENQQME----VRDQG-VDPNLKDGDGATPLHFAAS 152 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~-~~~~~~~~~g~t~l~~a~~ 152 (207)
..|.||||+|+..++.+++++|++. +.++ ..+..|.||||+|+..++.+ +++.+ .+++..+..|.||||.|+.
T Consensus 70 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 70 SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999955 4466 88999999999999999987 45677 8999999999999999999
Q ss_pred CCC-----HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcc
Q psy14140 153 RGH-----ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQ 204 (207)
Q Consensus 153 ~~~-----~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~ 204 (207)
.+. .+++++|+++|+++ .++..|+|||++|+..|+.++ ++.|++.|
T Consensus 150 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~------~~~Ll~~G 201 (201)
T 3hra_A 150 LREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEI------SKILAQYN 201 (201)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH------HHHHHTCC
T ss_pred hccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhH------HHHHHhcC
Confidence 988 99999999999999 689999999999999999998 55555543
No 18
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-33 Score=203.69 Aligned_cols=184 Identities=23% Similarity=0.329 Sum_probs=146.5
Q ss_pred CCcceeehccCChhHHHHHhhccchhhH------------------HHHHHHHHHcC--CCCCc-hhhcccchhhhhhhc
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLML------------------SNCLSLLVQHG--TLPDY-HEEAKLHGKLHGCTC 60 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~------------------~~~v~~ll~~g--~~~~~-~~~~~~~~~~~a~~~ 60 (207)
.||||+|+..|+.++++.+++.+..... .+++++|+++| .+++. .+..+.+|++.|+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 4899999999999999988876654211 37888888888 44444 557778888888888
Q ss_pred cCCchHH-HHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hhhc
Q psy14140 61 RKGESTK-VRDQG--VDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQ 132 (207)
Q Consensus 61 ~~~~~~~-ll~~g--~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~ 132 (207)
++..+.. |++.| ++++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.+ +++.
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 162 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 8777666 66777 778888888888888888888888888888888888 77888888888888888776 4566
Q ss_pred C-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHH-HhCCCc-cCCCCCCCHHHHHHHc
Q psy14140 133 G-VDPNLKDGDGATPLHFAASRGHADCVRWLL-RYGGKL-VPDKFGKSPINDAAEN 185 (207)
Q Consensus 133 ~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~g~~~-~~~~~g~t~l~~a~~~ 185 (207)
| .+++..|..|+||||+|+..|+.+++++|+ +.|+++ .++..|+|||++|...
T Consensus 163 g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 7 788888888888888888888888888888 778888 6788888888888654
No 19
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.5e-34 Score=213.99 Aligned_cols=180 Identities=19% Similarity=0.230 Sum_probs=161.4
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+..|+.++ +++|+++|++++..+ +.+|+++|+..++..+.. |++.|++++.+|.
T Consensus 32 ~t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 93 (285)
T 3kea_A 32 HSASYYAIADNNVRL----------------VCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD 93 (285)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 489999999999985 888889999888874 789999999999988877 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCC-CcHHHHHHhcChHH----HhhcCCCCCCCCC-CCCcHHHHHHHC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFG-KSPINDAAENQQME----VRDQGVDPNLKDG-DGATPLHFAASR 153 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g-~~~l~~a~~~~~~~----l~~~~~~~~~~~~-~g~t~l~~a~~~ 153 (207)
.|.||||+|+..|+.+++++|++.|+++ ..+..| .||||+|+..++.+ +++.|.+. .+. .|.||||+|+..
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~g~t~L~~A~~~ 171 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKN 171 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT--CCCSTHHHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc--ccccCCccHHHHHHHc
Confidence 9999999999999999999999999999 888899 79999999999987 45677665 333 889999999999
Q ss_pred CCHHHHHHHHHhCCCc-cCCCCCCCH-HHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 154 GHADCVRWLLRYGGKL-VPDKFGKSP-INDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 154 ~~~~~~~~Ll~~g~~~-~~~~~g~t~-l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+.+++++|+++|+++ .++..|+|| ||+|+..++.++ ++.|++.|++|
T Consensus 172 g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~------v~~Ll~~gad~ 221 (285)
T 3kea_A 172 GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEM------LQALFKYDINI 221 (285)
T ss_dssp TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHH------HHHHTTSCBCS
T ss_pred ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHH------HHHHHHcCCCC
Confidence 9999999999999999 688999998 999999999887 77788888775
No 20
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-33 Score=221.07 Aligned_cols=190 Identities=26% Similarity=0.355 Sum_probs=153.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCc
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGE 64 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~ 64 (207)
.||||+||..|+.++|+.+++.+.... ..+++++|+++|+++|..+..+.+|++.|+..++..
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 94 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 94 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 488999999999999998887654311 137888888888888888888888888888888877
Q ss_pred hHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCC
Q psy14140 65 STK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNL 138 (207)
Q Consensus 65 ~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~ 138 (207)
++. |++.|++++..+..|.||||+|+..|+.+++++|++.+.+. ..+..|.||||+|+..++.+ +++.+.+++.
T Consensus 95 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 95 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 776 66888888888888888888888888888888888888777 77778888888888888776 4567888888
Q ss_pred CCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCccee
Q psy14140 139 KDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVS 191 (207)
Q Consensus 139 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~ 191 (207)
.+..|.|||+.|+..++.+++++|+++|.++ ..+..|.||||+|+..|+.+++
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 228 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 228 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 8888888888888888888888888888777 5667777888888887777763
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-33 Score=207.23 Aligned_cols=198 Identities=27% Similarity=0.307 Sum_probs=177.5
Q ss_pred CcceeehccCChhHHHHHhhccchhh------------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCc
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLM------------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGE 64 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~------------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~ 64 (207)
||||.|+.+|+.++++.+++.+.... ..+++++|+++|++++..+..+.+|++.|+..++..
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 79999999999999999998765421 148999999999999999999999999999999988
Q ss_pred hHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CC----------CCCCCcHHHHHHhcChHHH---
Q psy14140 65 STK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VP----------DKFGKSPINDAAENQQMEV--- 129 (207)
Q Consensus 65 ~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~----------~~~g~~~l~~a~~~~~~~l--- 129 (207)
+.. |++.|++++..+..|.||||+|+..++.+++++|++.|.++ .. +..|.||||+|+..++.++
T Consensus 87 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 166 (285)
T 1wdy_A 87 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166 (285)
T ss_dssp HHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHH
Confidence 877 77999999999999999999999999999999999999988 44 7789999999999999873
Q ss_pred -hhc-CCCCCCCCCCCCcHHHHHHHCCC----HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhh
Q psy14140 130 -RDQ-GVDPNLKDGDGATPLHFAASRGH----ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLT 202 (207)
Q Consensus 130 -~~~-~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~ 202 (207)
++. +.+++..+..|.||||.|+..++ .+++++|+++|+++ .++..|+||||+|+..|+.++ ++.|++
T Consensus 167 Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~ 240 (285)
T 1wdy_A 167 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL------VQRLLE 240 (285)
T ss_dssp HHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHH------HHHHHH
T ss_pred HHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH------HHHHHh
Confidence 444 99999999999999999999999 99999999999999 688999999999999999887 566666
Q ss_pred -cccC
Q psy14140 203 -IQKV 206 (207)
Q Consensus 203 -~~~~ 206 (207)
.|++
T Consensus 241 ~~g~~ 245 (285)
T 1wdy_A 241 QEHIE 245 (285)
T ss_dssp SSSCC
T ss_pred ccCCC
Confidence 5544
No 22
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.2e-33 Score=191.85 Aligned_cols=149 Identities=36% Similarity=0.569 Sum_probs=136.9
Q ss_pred chhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH-
Q psy14140 52 HGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME- 128 (207)
Q Consensus 52 ~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~- 128 (207)
..++.|+..|+.+++. |++.|+++|.+|..|.||||+|+..++.+++++|++.|+++ .++..|.||||+|+..++.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 3688899999988776 88999999999999999999999999999999999999999 99999999999999999887
Q ss_pred ---HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcc
Q psy14140 129 ---VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQ 204 (207)
Q Consensus 129 ---l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~ 204 (207)
|++.|++++..|..|+||||+|+..|+.+++++|+++|+++ .++..|+|||++|+..|+.++ ++.|++.|
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i------v~~Ll~~G 159 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEV------VKLLEKQG 159 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHTC-
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH------HHHHHHCC
Confidence 56899999999999999999999999999999999999999 689999999999999999988 67777777
Q ss_pred cC
Q psy14140 205 KV 206 (207)
Q Consensus 205 ~~ 206 (207)
++
T Consensus 160 A~ 161 (169)
T 4gpm_A 160 GW 161 (169)
T ss_dssp --
T ss_pred CC
Confidence 64
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.6e-34 Score=219.83 Aligned_cols=190 Identities=16% Similarity=0.194 Sum_probs=167.5
Q ss_pred CcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCch
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGES 65 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~ 65 (207)
||||+||..|+.++|+.+++.+.... ..+++++|+++|++++. ..+.+|++.|+..++..+
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~ 99 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDL 99 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHH
Confidence 79999999999999999998765422 14899999999996654 567889999999998887
Q ss_pred HH-HHhc----CCCCCC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHHhCCCc-CCCCCCCcHHHH
Q psy14140 66 TK-VRDQ----GVDPNL-----------------KDGDGATPLHFAASRG--HADCVRWLLRYGGKL-VPDKFGKSPIND 120 (207)
Q Consensus 66 ~~-ll~~----g~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~Ll~~~~~~-~~~~~g~~~l~~ 120 (207)
+. |++. |.+++. .+..|.||||+|+..| +.+++++|++.|+++ ..+..|.||||+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 179 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 77 6666 777776 8889999999999999 999999999999999 899999999999
Q ss_pred HHhcChHH----HhhcCCC-----CCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcce
Q psy14140 121 AAENQQME----VRDQGVD-----PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEV 190 (207)
Q Consensus 121 a~~~~~~~----l~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~ 190 (207)
|+..++.+ |++.|.+ ++..+..|.||||+|+..|+.+++++|+++|+++ ..+..|+||||+|+..|+.++
T Consensus 180 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~ 259 (364)
T 3ljn_A 180 AMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLL 259 (364)
T ss_dssp HHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHH
T ss_pred HHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHH
Confidence 99999987 5567777 9999999999999999999999999999999999 689999999999999999998
Q ss_pred eehH
Q psy14140 191 STVS 194 (207)
Q Consensus 191 ~~~l 194 (207)
+++|
T Consensus 260 v~~L 263 (364)
T 3ljn_A 260 TKEL 263 (364)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-33 Score=211.15 Aligned_cols=183 Identities=26% Similarity=0.358 Sum_probs=147.3
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||.|+.+|+.++ +++|+++|+++|..+..+.+|++.|+..++..+.. |++.|++++..|..
T Consensus 42 t~l~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 105 (299)
T 1s70_B 42 AVFLAACSSGDTEE----------------VLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE 105 (299)
T ss_dssp HHHHHHHHHTCHHH----------------HHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cHHHHHHHcCCHHH----------------HHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 68999999999985 77888888888888888899999988888877766 67889999999989
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHHHhh-----cCCC--------------------
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVRD-----QGVD-------------------- 135 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~l~~-----~~~~-------------------- 135 (207)
|.||||+|+..|+.+++++|++.|+++ ..+..|.||+|+|+..+..+++. .+.+
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWL 185 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHH
Confidence 999999999999999999999998888 78888888888887776655321 2222
Q ss_pred ------CCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 136 ------PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 136 ------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
....+..|.||||+|+..|+.+++++|+++|+++ .++..|.||||+|+..|+.++ ++.|++.|++|
T Consensus 186 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~------v~~Ll~~gad~ 258 (299)
T 1s70_B 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEA------CRILVENLCDM 258 (299)
T ss_dssp HHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHH------HHHHHHTTCCT
T ss_pred hccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHH------HHHHHHcCCCC
Confidence 2234567888888888888888888888888888 577888888888888888776 66667777664
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.5e-34 Score=207.85 Aligned_cols=171 Identities=22% Similarity=0.277 Sum_probs=154.9
Q ss_pred HHHHHHH----HcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q psy14140 31 NCLSLLV----QHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG 105 (207)
Q Consensus 31 ~~v~~ll----~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 105 (207)
+++++|+ +.|.+++..+..+.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..++.+++++|++.+
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 102 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSA 102 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3455555 489999999999999999999999988877 77999999999999999999999999999999999998
Q ss_pred C----Cc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCC-CCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCC
Q psy14140 106 G----KL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKD-GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKF 174 (207)
Q Consensus 106 ~----~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~ 174 (207)
. ++ ..+..|.||||+|+..++.+ +++.|.+++..+ ..|.||||+|+..|+.+++++|+++|+++ .++..
T Consensus 103 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (241)
T 1k1a_A 103 APGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 182 (241)
T ss_dssp CTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT
T ss_pred CCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 7 55 78899999999999999877 567999999988 78999999999999999999999999999 68899
Q ss_pred CCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 175 GKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 175 g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+||||+|+..|+.++ ++.|++.|++|
T Consensus 183 g~t~L~~A~~~~~~~~------v~~Ll~~ga~~ 209 (241)
T 1k1a_A 183 GSSALHSASGRGLLPL------VRTLVRSGADS 209 (241)
T ss_dssp SCBHHHHHHHHTCHHH------HHHHHHTTCCT
T ss_pred CCCHHHHHHHcCCHHH------HHHHHhcCCCC
Confidence 9999999999999887 77777787765
No 26
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3e-33 Score=212.68 Aligned_cols=191 Identities=23% Similarity=0.282 Sum_probs=133.5
Q ss_pred CcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCch
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGES 65 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~ 65 (207)
||||+|+.+|+.++|+.|++.+.... ...++..+++.+++++..+..+.+|++.|+..++..+
T Consensus 61 TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~ 140 (337)
T 4g8k_A 61 TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 140 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHH
Confidence 66666666666666666666554311 0234555555555666667777778888777777666
Q ss_pred HH-HHhcCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHh-CCCc-CCCCCCCcHHHHHHhcChH----H
Q psy14140 66 TK-VRDQGVDPNLK----------DGDGATPLHFAASRGHADCVRWLLRY-GGKL-VPDKFGKSPINDAAENQQM----E 128 (207)
Q Consensus 66 ~~-ll~~g~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~-~~~~~g~~~l~~a~~~~~~----~ 128 (207)
.. +++.|++++.. +..|.||||+|+..|+.+++++|++. |+++ ..+..|.++++.++..+.. .
T Consensus 141 ~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~ 220 (337)
T 4g8k_A 141 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 220 (337)
T ss_dssp HHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHH
T ss_pred HHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHH
Confidence 65 66777777653 33577888888888888888888854 6777 7777888888776543321 1
Q ss_pred ----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHh-CCCc-cCCCCCCCHHHHHHHcCCcceeeh
Q psy14140 129 ----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRY-GGKL-VPDKFGKSPINDAAENQQMEVSTV 193 (207)
Q Consensus 129 ----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~-~~~~~g~t~l~~a~~~~~~~~~~~ 193 (207)
|++.|++++..+..|.||||+|+..|+.+++++|++. |+++ .++..|+||||+|+..|+.+++++
T Consensus 221 i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~ 291 (337)
T 4g8k_A 221 ITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 291 (337)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 4577888888888888888888888888888888764 6777 577788888888888888777443
No 27
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.3e-33 Score=201.26 Aligned_cols=193 Identities=20% Similarity=0.263 Sum_probs=172.1
Q ss_pred CCcceeehccCChhHHHHHhhccchhh-----------------HHHHHHHHHHcCCCCCchhh-cccchhhhhhhccCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM-----------------LSNCLSLLVQHGTLPDYHEE-AKLHGKLHGCTCRKG 63 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~-----------------~~~~v~~ll~~g~~~~~~~~-~~~~~~~~a~~~~~~ 63 (207)
.||||.|+..|+.++++.+++.+.... ..+++++|+++|.+++.... .+.+|++.|+..++.
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 489999999999999999998765521 13899999999999876554 488999999999988
Q ss_pred chHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcCh-HH----HhhcCCCC
Q psy14140 64 ESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQ-ME----VRDQGVDP 136 (207)
Q Consensus 64 ~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~-~~----l~~~~~~~ 136 (207)
.+.. |++.|++++..+..|.||||+|+..++.+++++|++.|.++ ..+..|.||+|+|+..+. .+ +++.+.++
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 8776 77999999999999999999999999999999999999999 899999999999996665 22 67899999
Q ss_pred CCCCC-CCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 137 NLKDG-DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 137 ~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
+..+. .|.||||.|+..|+.+++++|+++|+++ .++..|+|||++|++.++.+++++|
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L 229 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHL 229 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 99887 8999999999999999999999999999 6899999999999999999985444
No 28
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.4e-34 Score=211.34 Aligned_cols=188 Identities=20% Similarity=0.233 Sum_probs=158.8
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCC----chhhcccchhhhhhhc---cCCchHH-HHhcCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPD----YHEEAKLHGKLHGCTC---RKGESTK-VRDQGV 73 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~----~~~~~~~~~~~~a~~~---~~~~~~~-ll~~g~ 73 (207)
.||||+|+..|+.++|+.++ +.+.+.+.+++ ..+..+.+|+++|+.. ++..++. |++.|+
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll------------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLL------------PFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHH------------HHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHH------------HHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 37999999999999866544 44445777775 4578899999999976 7777666 677765
Q ss_pred CC-----------CCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCC--------------CCCcHHHHHHhcChH
Q psy14140 74 DP-----------NLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDK--------------FGKSPINDAAENQQM 127 (207)
Q Consensus 74 ~~-----------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~--------------~g~~~l~~a~~~~~~ 127 (207)
++ ...|..|.||||+|+..|+.+++++|++.|+++ ..+. .|.||||+|+..++.
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 42 235678999999999999999999999999999 6665 799999999999988
Q ss_pred H----Hhh---cCCCCCCCCCCCCcHHHHHHHCCC---------HHHHHHHHHhCCCcc--------CCCCCCCHHHHHH
Q psy14140 128 E----VRD---QGVDPNLKDGDGATPLHFAASRGH---------ADCVRWLLRYGGKLV--------PDKFGKSPINDAA 183 (207)
Q Consensus 128 ~----l~~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~--------~~~~g~t~l~~a~ 183 (207)
+ |++ .|++++..|..|+||||+|+..++ .+++++|+++|+++. ++..|+||||+|+
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence 7 567 899999999999999999999888 799999999998883 7899999999999
Q ss_pred HcCCcceeehHHHHHHHhhccc-CC
Q psy14140 184 ENQQMEVSTVSPVVRRLLTIQK-VP 207 (207)
Q Consensus 184 ~~~~~~~~~~l~~~~~ll~~~~-~p 207 (207)
..|+.++ ++.|++.|+ +|
T Consensus 242 ~~g~~~i------v~~Ll~~ga~dp 260 (273)
T 2pnn_A 242 SSGKIGV------LAYILQREIHEP 260 (273)
T ss_dssp HTTCHHH------HHHHHHHHTC--
T ss_pred HhChHHH------HHHHHHCCCCCc
Confidence 9999988 788888888 55
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-33 Score=215.42 Aligned_cols=198 Identities=19% Similarity=0.237 Sum_probs=156.8
Q ss_pred CCcceeehccCChhHHHHHhh--------ccchh-----------------hHHHHHHHHHHcCCCCCchhhcccchhhh
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGS--------MGDRL-----------------MLSNCLSLLVQHGTLPDYHEEAKLHGKLH 56 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~--------~~~~~-----------------~~~~~v~~ll~~g~~~~~~~~~~~~~~~~ 56 (207)
.||||+||.+|+.++++.++. .+... ...+++++|+++|++++..+..+.+|++.
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~ 205 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ 205 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHH
Confidence 489999999999999888763 22221 11378888888888888888888888888
Q ss_pred hhhccCCchHH-HHhcC---CCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHhCCCc-C--------CCCCCCcHHHH
Q psy14140 57 GCTCRKGESTK-VRDQG---VDPNLKDGDGATPLHFAASRG---HADCVRWLLRYGGKL-V--------PDKFGKSPIND 120 (207)
Q Consensus 57 a~~~~~~~~~~-ll~~g---~~~~~~~~~g~t~l~~a~~~~---~~~~~~~Ll~~~~~~-~--------~~~~g~~~l~~ 120 (207)
|+..++..++. |++.+ ++++..|..|.||||+|+..+ +.+++++|++.|.++ . .+..|.||||+
T Consensus 206 A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~ 285 (373)
T 2fo1_E 206 AAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY 285 (373)
T ss_dssp HHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHH
T ss_pred HHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHH
Confidence 88888777766 55666 788888888888888888877 788888888888877 3 45678888888
Q ss_pred HHhcChHH----Hhhc-CCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 121 AAENQQME----VRDQ-GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 121 a~~~~~~~----l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
|+..++.+ |++. +++++..|..|.||||+|+..|+.+++++|+++|+++ .++..|+|||++|+.+|+.++
T Consensus 286 A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~i---- 361 (373)
T 2fo1_E 286 AAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI---- 361 (373)
T ss_dssp HHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHH----
T ss_pred HHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHH----
Confidence 88888877 3444 4888888888999999999889999999999888888 688888899999999888887
Q ss_pred HHHHHHhhccc
Q psy14140 195 PVVRRLLTIQK 205 (207)
Q Consensus 195 ~~~~~ll~~~~ 205 (207)
++.|++.++
T Consensus 362 --v~~Ll~~~a 370 (373)
T 2fo1_E 362 --VDIFDRCRP 370 (373)
T ss_dssp --HHHHHTTC-
T ss_pred --HHHHHhcCc
Confidence 555555544
No 30
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.7e-33 Score=200.16 Aligned_cols=172 Identities=28% Similarity=0.366 Sum_probs=159.1
Q ss_pred HHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC-CC
Q psy14140 30 SNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG-GK 107 (207)
Q Consensus 30 ~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~ 107 (207)
.+++++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..++.+++++|++.+ .+
T Consensus 24 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 103 (237)
T 3b7b_A 24 VDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMD 103 (237)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 37899999999999999999999999999999888776 77999999999999999999999999999999999998 56
Q ss_pred c-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHH
Q psy14140 108 L-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPIND 181 (207)
Q Consensus 108 ~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~ 181 (207)
+ ..+..|.||+|+|+..++.+ +++.|.+++..+..|.||||.|+..|+.+++++|++.|+++ ..+..|.||||+
T Consensus 104 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 183 (237)
T 3b7b_A 104 VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183 (237)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 6 88899999999999999887 56799999999999999999999999999999999999999 688999999999
Q ss_pred HHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 182 AAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 182 a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+..++.++ ++.|++.|++|
T Consensus 184 A~~~~~~~~------v~~Ll~~gad~ 203 (237)
T 3b7b_A 184 AARENRYDC------VVLFLSRDSDV 203 (237)
T ss_dssp HHHTTCHHH------HHHHHTTTCCT
T ss_pred HHHhCCHhH------HHHHHHcCCCC
Confidence 999999887 67778877764
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=202.70 Aligned_cols=183 Identities=26% Similarity=0.367 Sum_probs=140.5
Q ss_pred hHHHHHhhccchhhHHHHHHHHHHcCCC--------CCchhhcccchhhhhhhccCCc--hHHHHhcCCCCCCCCCCCCC
Q psy14140 15 KCSSQAGSMGDRLMLSNCLSLLVQHGTL--------PDYHEEAKLHGKLHGCTCRKGE--STKVRDQGVDPNLKDGDGAT 84 (207)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~v~~ll~~g~~--------~~~~~~~~~~~~~~a~~~~~~~--~~~ll~~g~~~~~~~~~g~t 84 (207)
+.+..++..++. ++|++|++.|.+ ++..+..+.+|++.++.++... +..|++.|+++|.+|..|.|
T Consensus 13 ~~L~~A~~~G~~----~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T 88 (269)
T 4b93_B 13 EKLLRAVADGDL----EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS 88 (269)
T ss_dssp HHHHHHHHTTCH----HHHHHHHTCC----------------------------------------CCCCTTCCCTTSCC
T ss_pred hHHHHHHHcCCH----HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC
Confidence 334556666666 799999999975 4556677888999888777643 34488999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHH
Q psy14140 85 PLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCV 159 (207)
Q Consensus 85 ~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 159 (207)
|||+|+..|+.+++++|++.++++ ..+..|.||+++|+..++.+ +++.|++++..|..|.||||+|+..|+.+++
T Consensus 89 pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 89 PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999999999999999 89999999999999999877 5689999999999999999999999999999
Q ss_pred HHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 160 RWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 160 ~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
++|+++|+++ ..+..|.||||+|+..|+.++ ++.|++.|++|
T Consensus 169 ~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~------v~~Ll~~Gad~ 211 (269)
T 4b93_B 169 ALLLQHGASINASNNKGNTALHEAVIEKHVFV------VELLLLHGASV 211 (269)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH------HHHHHHTTCCS
T ss_pred HHHHHCCCCCCccccCCCcHHHHHHHcCCHHH------HHHHHHCCCCC
Confidence 9999999999 689999999999999999987 77788888875
No 32
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=202.10 Aligned_cols=167 Identities=25% Similarity=0.433 Sum_probs=153.7
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+.+|+.++ +++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++.. .
T Consensus 37 ~t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~ 99 (261)
T 2xai_A 37 VSPLHEACLGGHLSC----------------VKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-S 99 (261)
T ss_dssp CCHHHHHHHHTCHHH----------------HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-C
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-C
Confidence 489999999999974 88899999999999999999999999999988877 77999999864 4
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.+ +++.|++++. +..|.||||+|+..++
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTAS 178 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCC
Confidence 6999999999999999999999999999 89999999999999999887 5678999985 8899999999999999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcC
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQ 186 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~ 186 (207)
.+++++|+++|+++ .+|..|+|||++|+.++
T Consensus 179 ~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 179 EELACLLMDFGADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhccccc
Confidence 99999999999999 69999999999999654
No 33
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=212.31 Aligned_cols=172 Identities=21% Similarity=0.272 Sum_probs=154.2
Q ss_pred HHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC---
Q psy14140 30 SNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG--- 105 (207)
Q Consensus 30 ~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~--- 105 (207)
...++.|+++|+++|..+..+.+|++.|+..++..++. |++.|++++..+..|.||||+|+..|+.+++++|++.+
T Consensus 146 ~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 225 (373)
T 2fo1_E 146 VHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK 225 (373)
T ss_dssp HHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH
T ss_pred HHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc
Confidence 45678899999999999999999999999999988877 77999999999999999999999999999999999987
Q ss_pred CCc-CCCCCCCcHHHHHHhcC---hHH----HhhcCCCCCC--------CCCCCCcHHHHHHHCCCHHHHHHHHHhC-CC
Q psy14140 106 GKL-VPDKFGKSPINDAAENQ---QME----VRDQGVDPNL--------KDGDGATPLHFAASRGHADCVRWLLRYG-GK 168 (207)
Q Consensus 106 ~~~-~~~~~g~~~l~~a~~~~---~~~----l~~~~~~~~~--------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~ 168 (207)
.++ ..+..|.||||+|+..+ ..+ +++.|++++. .+..|.||||+|+..|+.+++++|++++ ++
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 566 88999999999999887 555 5678888876 5678999999999999999999999886 88
Q ss_pred c-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 169 L-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 169 ~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+ ..+..|+||||+|+..|+.++ ++.|++.|+++
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~~i------v~~Ll~~gad~ 339 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRIEV------VMYLIQQGASV 339 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHH------HHHHHHTTCCS
T ss_pred ccCcCCCCCCHHHHHHHcCCHHH------HHHHHHcCCCc
Confidence 8 689999999999999999888 67777777764
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.8e-32 Score=203.07 Aligned_cols=172 Identities=24% Similarity=0.286 Sum_probs=141.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCC------
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVD------ 74 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~------ 74 (207)
.||||+|+..|+.++ +++|+++|++++..+..+.+|+++|+..++..+.. |++.|++
T Consensus 46 ~t~L~~A~~~g~~~~----------------v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 109 (282)
T 1oy3_D 46 QTALHLAAILGEAST----------------VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS 109 (282)
T ss_dssp CCHHHHHHHHTCHHH----------------HHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhH
Confidence 589999999999875 88999999999999999999999999998888776 5566654
Q ss_pred -----------------------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC-
Q psy14140 75 -----------------------------------------PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPD- 111 (207)
Q Consensus 75 -----------------------------------------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~- 111 (207)
++..+..|.||||+|+..|+.+++++|++.|+++ ..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 189 (282)
T 1oy3_D 110 DTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189 (282)
T ss_dssp ----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 7788899999999999999999999999999999 655
Q ss_pred CCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcC
Q psy14140 112 KFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQ 186 (207)
Q Consensus 112 ~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~ 186 (207)
..|.||||+|+..++.+ |++.|++++..+..|.||||+|+..++.+++++|+++|+++ .++..|.|||++|....
T Consensus 190 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 45999999999999887 56899999999999999999999999999999999999999 69999999999998876
Q ss_pred Ccc
Q psy14140 187 QME 189 (207)
Q Consensus 187 ~~~ 189 (207)
..+
T Consensus 270 ~~~ 272 (282)
T 1oy3_D 270 DSD 272 (282)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=3.4e-33 Score=205.07 Aligned_cols=186 Identities=21% Similarity=0.214 Sum_probs=158.8
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchh----hcccchhhhhh---hccCCchHH-HHhcCC-
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHE----EAKLHGKLHGC---TCRKGESTK-VRDQGV- 73 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~----~~~~~~~~~a~---~~~~~~~~~-ll~~g~- 73 (207)
||||.|+..|+.+.++ .++++++++|++++..+ ..+.+|++.|+ ..++..++. |++.|+
T Consensus 7 ~~L~~A~~~g~~~~v~------------~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~ 74 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLE------------GLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEK 74 (260)
T ss_dssp HHHHHHHHHTCGGGGT------------THHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHH------------HHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccc
Confidence 6899999999999865 35667888999999777 56999999887 557777766 667663
Q ss_pred ----------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC--------------CCCCcHHHHHHhcChHH
Q psy14140 74 ----------DPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPD--------------KFGKSPINDAAENQQME 128 (207)
Q Consensus 74 ----------~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~--------------~~g~~~l~~a~~~~~~~ 128 (207)
+++..|..|.||||+|+..|+.+++++|++.|+++ ..+ ..|.||||+|+..++.+
T Consensus 75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 154 (260)
T 3jxi_A 75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH 154 (260)
T ss_dssp TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH
T ss_pred ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHH
Confidence 34555668999999999999999999999999999 666 68999999999999887
Q ss_pred ----Hhh---cCCCCCCCCCCCCcHHHHHHHCCC---------HHHHHHHHHhCCCc--------cCCCCCCCHHHHHHH
Q psy14140 129 ----VRD---QGVDPNLKDGDGATPLHFAASRGH---------ADCVRWLLRYGGKL--------VPDKFGKSPINDAAE 184 (207)
Q Consensus 129 ----l~~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~--------~~~~~g~t~l~~a~~ 184 (207)
|++ .|++++..|..|+||||+|+..++ .+++++|+++|+++ .++..|+||||+|+.
T Consensus 155 ~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 155 IVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHH
Confidence 567 899999999999999999998877 79999999999887 378899999999999
Q ss_pred cCCcceeehHHHHHHHhhcccC
Q psy14140 185 NQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 185 ~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
.|+.++ ++.||+.|.+
T Consensus 235 ~g~~~~------v~~Ll~~g~~ 250 (260)
T 3jxi_A 235 TGKIGI------FQHIIRREIA 250 (260)
T ss_dssp TTCHHH------HHHHHHHHHH
T ss_pred cCCHHH------HHHHHHhCCC
Confidence 999998 5666665543
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=5.9e-32 Score=201.20 Aligned_cols=176 Identities=24% Similarity=0.413 Sum_probs=158.1
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+..|+.++ +++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++..+
T Consensus 93 ~t~L~~A~~~g~~~~----------------v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~- 155 (285)
T 3d9h_A 93 VSPLHEACLGGHLSC----------------VKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES- 155 (285)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-
T ss_pred CCHHHHHHHCCcHHH----------------HHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-
Confidence 489999999999874 88999999999999999999999999999988877 779999998654
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||+|+..|+.+++++|++.|.++ ..+..|.||||+|+..++.+ +++.|++++. +..|.||||+|+..++
T Consensus 156 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~ 234 (285)
T 3d9h_A 156 DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTAS 234 (285)
T ss_dssp TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCC
Confidence 5999999999999999999999999999 89999999999999999887 5678999985 8899999999999999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhc
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTI 203 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~ 203 (207)
.+++++|+++|+++ .+|..|+|||++|+. +.++ ++.|++.
T Consensus 235 ~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~------~~~Ll~~ 275 (285)
T 3d9h_A 235 EELACLLMDFGADTQAKNAEGKRPVELVPP--ESPL------AQLFLER 275 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHH------HHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHH------HHHHHHh
Confidence 99999999999999 699999999999994 4455 5555554
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.98 E-value=4.3e-32 Score=195.37 Aligned_cols=172 Identities=21% Similarity=0.186 Sum_probs=153.4
Q ss_pred HHHHHHHHHcCCCCCc-hhhcccchhhhhhhccCCchHH-HHhcC--CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy14140 30 SNCLSLLVQHGTLPDY-HEEAKLHGKLHGCTCRKGESTK-VRDQG--VDPNL-KDGDGATPLHFAASRGHADCVRWLLRY 104 (207)
Q Consensus 30 ~~~v~~ll~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~-ll~~g--~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 104 (207)
.++++.|+++|.+++. .+..+.+|+++|+..++..+.. |++.| ++++. .+..|.||||+|+..++.+++++|++.
T Consensus 15 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 94 (228)
T 2dzn_A 15 FFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94 (228)
T ss_dssp HHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS
T ss_pred HHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 3789999999987754 7889999999999999988877 77999 55555 788999999999999999999999999
Q ss_pred C--CCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhC-CCc-cCCCCC
Q psy14140 105 G--GKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG-GKL-VPDKFG 175 (207)
Q Consensus 105 ~--~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~-~~~~~g 175 (207)
| .++ ..+..|.||||+|+..++.+ +++.|++++..+..|.||||+|+..|+.+++++|++.| +++ .++..|
T Consensus 95 g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g 174 (228)
T 2dzn_A 95 PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174 (228)
T ss_dssp SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTS
T ss_pred CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCC
Confidence 8 666 88899999999999999887 56799999999999999999999999999999999999 888 689999
Q ss_pred CCHHHHHHHcCCcceeehHHHHHHHh-hcccCC
Q psy14140 176 KSPINDAAENQQMEVSTVSPVVRRLL-TIQKVP 207 (207)
Q Consensus 176 ~t~l~~a~~~~~~~~~~~l~~~~~ll-~~~~~p 207 (207)
+||||+|+..++.++ ++.|+ +.|++|
T Consensus 175 ~t~L~~A~~~~~~~~------v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 175 WTPLFHALAEGHGDA------AVLLVEKYGAEY 201 (228)
T ss_dssp CCHHHHHHHTTCHHH------HHHHHHHHCCCS
T ss_pred CCHHHHHHHcCCHHH------HHHHHHhcCCCC
Confidence 999999999999988 66677 667664
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=1.9e-31 Score=195.16 Aligned_cols=173 Identities=22% Similarity=0.265 Sum_probs=143.7
Q ss_pred HHHHHHHHHHcCCCCCch-hhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy14140 29 LSNCLSLLVQHGTLPDYH-EEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGG 106 (207)
Q Consensus 29 ~~~~v~~ll~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 106 (207)
..+++++|+++|++++.. +..+.+|+++|+..++..++. |++.|++++..|..|.||||+|+..++.+++++|++.+.
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 357999999999999654 789999999999999988776 789999999999999999999999999999999999987
Q ss_pred -Cc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHH
Q psy14140 107 -KL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPI 179 (207)
Q Consensus 107 -~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l 179 (207)
++ ..+..|.||||+|+..++.+ +++.|++++..+..|.||||+|+..|+.+++++|+++|+++ .++..|+|||
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL 194 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 194 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 55 88999999999999998765 66899999999999999999999999999999999999999 6889999999
Q ss_pred HHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 180 NDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 180 ~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+|+..|+.++ ++.|++.|++|
T Consensus 195 ~~A~~~~~~~~------v~~Ll~~ga~~ 216 (253)
T 1yyh_A 195 FLAAREGSYET------AKVLLDHFANR 216 (253)
T ss_dssp HHHHHHTCHHH------HHHHHHTTCCT
T ss_pred HHHHHCCCHHH------HHHHHHcCCCc
Confidence 99999999987 67777877764
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=3.2e-31 Score=190.21 Aligned_cols=171 Identities=22% Similarity=0.270 Sum_probs=155.4
Q ss_pred HHHHHHHHcCCCCCch-hhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCC-C
Q psy14140 31 NCLSLLVQHGTLPDYH-EEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGG-K 107 (207)
Q Consensus 31 ~~v~~ll~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~-~ 107 (207)
+++++|+++|++++.. +..+.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..++.+++++|++.+. +
T Consensus 5 ~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~ 84 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 84 (223)
T ss_dssp CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC
T ss_pred HHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3577888899988765 789999999999999988776 779999999999999999999999999999999999987 5
Q ss_pred c-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHH
Q psy14140 108 L-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPIND 181 (207)
Q Consensus 108 ~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~ 181 (207)
+ ..+..|.||||+|+..++.+ +++.+++++..+..|.||||+|+..++.+++++|+++|+++ .++..|.||||+
T Consensus 85 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 85 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL 164 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHH
Confidence 5 88899999999999999887 56799999999999999999999999999999999999999 688999999999
Q ss_pred HHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 182 AAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 182 a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
|+..++.++ ++.|++.|++|
T Consensus 165 A~~~~~~~~------v~~Ll~~ga~~ 184 (223)
T 2f8y_A 165 AAREGSYET------AKVLLDHFANR 184 (223)
T ss_dssp HHHHTCHHH------HHHHHHTTCCT
T ss_pred HHHcCCHHH------HHHHHHcCCCC
Confidence 999999987 67777777764
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=1.9e-32 Score=210.24 Aligned_cols=190 Identities=19% Similarity=0.195 Sum_probs=168.4
Q ss_pred CCcceeehccCChhHHHHHhhccchhh---------------HHHHHHHHHHc----CCCCCc-----------------
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLM---------------LSNCLSLLVQH----GTLPDY----------------- 45 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~---------------~~~~v~~ll~~----g~~~~~----------------- 45 (207)
.||||+|+.+|+.++++.|++.+.... ..+++++|+++ |++++.
T Consensus 54 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (364)
T 3ljn_A 54 CTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHV 133 (364)
T ss_dssp CCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEE
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhcccc
Confidence 489999999999999999999776422 14899999999 888877
Q ss_pred hhhcccchhhhhhhcc--CCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-----c-CCCCCCCc
Q psy14140 46 HEEAKLHGKLHGCTCR--KGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGK-----L-VPDKFGKS 116 (207)
Q Consensus 46 ~~~~~~~~~~~a~~~~--~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----~-~~~~~g~~ 116 (207)
.+..+.+|+++|+..+ +..++. |++.|++++..|..|.||||+|+..|+.+++++|++.|++ + ..+..|.|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 8888999999999999 666665 7799999999999999999999999999999999999988 7 88999999
Q ss_pred HHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-------------cCCCCCCCHH
Q psy14140 117 PINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-------------VPDKFGKSPI 179 (207)
Q Consensus 117 ~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-------------~~~~~g~t~l 179 (207)
|||+|+..++.+ |++.|++++..|..|.|||++|+..|+.+++++|+++|+++ ..+..++||+
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDF 293 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccc
Confidence 999999999987 56899999999999999999999999999999999998654 1456688999
Q ss_pred HHHHHcCCccee
Q psy14140 180 NDAAENQQMEVS 191 (207)
Q Consensus 180 ~~a~~~~~~~~~ 191 (207)
++|+..++.+.+
T Consensus 294 ~~aa~~~~~~~v 305 (364)
T 3ljn_A 294 VPAAADPSKQEV 305 (364)
T ss_dssp SCSSCCHHHHHH
T ss_pred hhhhhccCHHHH
Confidence 999988866653
No 41
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=7.6e-31 Score=199.81 Aligned_cols=171 Identities=25% Similarity=0.305 Sum_probs=150.5
Q ss_pred HHHHHHHH-cCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Q psy14140 31 NCLSLLVQ-HGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 108 (207)
Q Consensus 31 ~~v~~ll~-~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 108 (207)
+.++.++. .+.+++..+..+.+|+++|+..++..++. |++.|++++..|..|.||||+|+..|+.+++++|++.|.++
T Consensus 38 ~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~ 117 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV 117 (351)
T ss_dssp HHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 55655554 58999999999999999999999988877 77999999999999999999999999999999999999999
Q ss_pred -CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCC-------------------------------------------
Q psy14140 109 -VPDKFGKSPINDAAENQQME----VRDQGVDPNLKD------------------------------------------- 140 (207)
Q Consensus 109 -~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~------------------------------------------- 140 (207)
..+..|.||||+|+..++.+ +++.|++++..+
T Consensus 118 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (351)
T 3utm_A 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKT 197 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHH
Confidence 89999999999999999887 557788876544
Q ss_pred -----------CCCCcHHHHHHHC---CCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhccc
Q psy14140 141 -----------GDGATPLHFAASR---GHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQK 205 (207)
Q Consensus 141 -----------~~g~t~l~~a~~~---~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~ 205 (207)
..|.||||.|+.. +..+++++|++.|+++ .++..|+||||+|+..|+.++ ++.|++.|+
T Consensus 198 l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~------v~~Ll~~ga 271 (351)
T 3utm_A 198 LALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDV------MEVLHKHGA 271 (351)
T ss_dssp TTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH------HHHHHHTTC
T ss_pred HHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHH------HHHHHHCCC
Confidence 4577999999998 5589999999999999 688999999999999999987 667777776
Q ss_pred CC
Q psy14140 206 VP 207 (207)
Q Consensus 206 ~p 207 (207)
++
T Consensus 272 ~~ 273 (351)
T 3utm_A 272 KM 273 (351)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 42
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.9e-30 Score=186.19 Aligned_cols=181 Identities=27% Similarity=0.369 Sum_probs=161.3
Q ss_pred HHHHhhccchhhHHHHHHHHHHcCC-CCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCC
Q psy14140 17 SSQAGSMGDRLMLSNCLSLLVQHGT-LPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGH 94 (207)
Q Consensus 17 ~~~~~~~~~~~~~~~~v~~ll~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~ 94 (207)
+..+...+.. ++++.+++.+. ..+..+..+.+|++.|+..++..+.. |++.|++++..|..|.||||+|+..++
T Consensus 10 l~~A~~~g~~----~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 10 ICNLAYSGKL----DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp HHHHHHHTCH----HHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHhCCH----HHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 4455555555 67888887764 46777889999999999999988776 779999999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 95 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 95 ~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|.+++..+..|.||||.|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 99999999999999 88999999999999999887 56799999999999999999999999999999999999999
Q ss_pred -cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 170 -VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 170 -~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
.++..|+||||+|+..++.++ ++.|++.|++|
T Consensus 166 ~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~~ga~~ 198 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDEERVEE------AKFLVTQGASI 198 (231)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHH------HHHHHHTTCCS
T ss_pred cccCCCCCCHHHHHHHCCCHHH------HHHHHHCCCCC
Confidence 688999999999999999887 67777777765
No 43
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=4.2e-30 Score=180.54 Aligned_cols=155 Identities=22% Similarity=0.256 Sum_probs=143.5
Q ss_pred CCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHH
Q psy14140 43 PDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPIND 120 (207)
Q Consensus 43 ~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~ 120 (207)
+|..+..+.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 4677888999999999999988776 78999999999999999999999999999999999999999 899999999999
Q ss_pred HHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHH
Q psy14140 121 AAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSP 195 (207)
Q Consensus 121 a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~ 195 (207)
|+..++.+ +++.|++++..+..|.||||+|+..|+.+++++|+++|+++ .++..|.|||++|+..|+.+++++|.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999887 56799999999999999999999999999999999999999 68999999999999999999966654
Q ss_pred HH
Q psy14140 196 VV 197 (207)
Q Consensus 196 ~~ 197 (207)
..
T Consensus 188 ~~ 189 (192)
T 2rfm_A 188 EV 189 (192)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-31 Score=201.33 Aligned_cols=165 Identities=22% Similarity=0.225 Sum_probs=125.5
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccC----CchHHHHhcC-CCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRK----GESTKVRDQG-VDPN 76 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~----~~~~~ll~~g-~~~~ 76 (207)
.||||+|+..|+.+ +|++|+++|++++..+..+.+|+++|+..++ ..+..+++.+ .+++
T Consensus 132 ~TpLh~Aa~~g~~~----------------~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 132 NTPLHWLTSIANLE----------------LVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp CCHHHHHHHTTCHH----------------HHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred CcHHHHHHHcCCHH----------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 47888888888776 4788888888888888888888888888776 4444566655 6788
Q ss_pred CCCCCCCCHHHHHHH----cCCHHHHHHHHHh--------------------CCCc-CCCCCCCcHHHHHHhcChHHHhh
Q psy14140 77 LKDGDGATPLHFAAS----RGHADCVRWLLRY--------------------GGKL-VPDKFGKSPINDAAENQQMEVRD 131 (207)
Q Consensus 77 ~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~--------------------~~~~-~~~~~g~~~l~~a~~~~~~~l~~ 131 (207)
.+|..|.||||+|+. .++.+++++|++. +.++ .++..|.||||.|+. -..+++
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~--~~~Ll~ 273 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD--LKWIIA 273 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS--HHHHHH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH--HHHHHH
Confidence 888888888888888 7888888888877 6666 778888888888875 223455
Q ss_pred cCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcC
Q psy14140 132 QGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQ 186 (207)
Q Consensus 132 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~ 186 (207)
. +++..|..|+||||+|+..|+.+++++|+++|+++ .++..|+||||+|+++|
T Consensus 274 ~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 274 N--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp H--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred h--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 5 58888999999999999999999999999999999 68999999999998764
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.7e-31 Score=195.99 Aligned_cols=179 Identities=17% Similarity=0.205 Sum_probs=156.5
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCC-CCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGV-DPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~-~~~~~~ 79 (207)
.+|+|.|+..|+.+.++.+++.... ..+|..+..|.+|+++|+..++..++. |++.|+ +++..+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~--------------~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 142 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLD--------------YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN 142 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHH--------------HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHh--------------hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC
Confidence 4677888888888775554443322 125788899999999999999988877 779998 999999
Q ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHH
Q psy14140 80 GDGATPLHFAA-----SRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHF 149 (207)
Q Consensus 80 ~~g~t~l~~a~-----~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~ 149 (207)
..|.||||+|+ ..++.+++++|++.|... ..+..|.||||+|+..++.+ |++.|++++..|..|+||||+
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 143 RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMC 222 (276)
T ss_dssp TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Confidence 99999999999 668899999999999888 88889999999999999987 568999999999999999999
Q ss_pred HHHCCCHHHHHHHHH-hCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 150 AASRGHADCVRWLLR-YGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 150 a~~~~~~~~~~~Ll~-~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
|+..|+.+++++|++ .|+++ .++..|+|||++|+..|+.+++++|
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~L 269 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999 89999 6999999999999999999995544
No 46
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.5e-30 Score=179.74 Aligned_cols=161 Identities=19% Similarity=0.260 Sum_probs=108.8
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCC-CCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTL-PDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~ 79 (207)
.||||.|+.+|+.++ ++.+++.+.. ++..+..+.+|++.|+..++..++. |++.|++++..+
T Consensus 3 ~~~L~~A~~~g~~~~----------------v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 66 (172)
T 3v30_A 3 SLSIHQLAAQGELDQ----------------LKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA 66 (172)
T ss_dssp -CCHHHHHHTTCHHH----------------HHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred hhhHHHHHHcCCHHH----------------HHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhc
Confidence 478999999999885 5566666654 5666777777777777777766665 667777777777
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCC
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRG 154 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~ 154 (207)
..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|++++..+..|.|||++|+..+
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 67 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhC
Confidence 77777777777777777777777777766 66666666666666666655 34566666666666666666666666
Q ss_pred CHHHHHHHHHhCCCc-cCCCCCCCH
Q psy14140 155 HADCVRWLLRYGGKL-VPDKFGKSP 178 (207)
Q Consensus 155 ~~~~~~~Ll~~g~~~-~~~~~g~t~ 178 (207)
+.+++++|++++++. .++..|.||
T Consensus 147 ~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 147 YRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CHHHHHHHHHHHHHHSCC-------
T ss_pred cHHHHHHHHHHHHHHhcccCCCCCC
Confidence 666666666666666 455555554
No 47
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=6.6e-30 Score=194.23 Aligned_cols=179 Identities=22% Similarity=0.257 Sum_probs=151.5
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCch----------hhcccchhhhhhhccCCchHH-HH-h
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYH----------EEAKLHGKLHGCTCRKGESTK-VR-D 70 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~----------~~~~~~~~~~a~~~~~~~~~~-ll-~ 70 (207)
||||+|+..|+.+ ++++++++|++++.. +..+.+|++.|+..++..++. |+ +
T Consensus 127 t~l~~A~~~~~~~----------------~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 127 TAFMEAAVYGKVK----------------ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 190 (337)
T ss_dssp BHHHHHHHTTCHH----------------HHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHcCcHH----------------HHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc
Confidence 5666666666665 577777888777654 345678999999999988877 55 5
Q ss_pred cCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hhh-cCCCCCCCC
Q psy14140 71 QGVDPNLKDGDGATPLHFAASRGH----ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRD-QGVDPNLKD 140 (207)
Q Consensus 71 ~g~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~-~~~~~~~~~ 140 (207)
.|++++.+|..|.|+++.++..+. ..++++|++.|+++ .++..|.||||+|+..++.+ +++ .+++++..|
T Consensus 191 ~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d 270 (337)
T 4g8k_A 191 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 270 (337)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBC
T ss_pred cCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcC
Confidence 699999999999999998776433 36889999999999 89999999999999999887 333 589999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHhCCCccCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 141 GDGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 141 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
..|+||||+|++.|+.+++++|+++|+++. ..+||++|+.+|+.++ ++.||+.|++|
T Consensus 271 ~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n----~~~~L~~A~~~~~~~i------v~~Ll~~GA~~ 327 (337)
T 4g8k_A 271 SDGKTALLLAVELKLKKIAELLCKRGASTD----CGDLVMTARRNYDHSL------VKVLLSHGAKE 327 (337)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHTTSCSST----TCCHHHHHHHTTCHHH------HHHHHHTTCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCHHHHHHHcCCHHH------HHHHHHCcCCC
Confidence 999999999999999999999999999883 3469999999999887 88899999986
No 48
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=5.1e-31 Score=197.08 Aligned_cols=167 Identities=23% Similarity=0.307 Sum_probs=150.6
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+.+|+.++ +++|+++|++++..+..+.+|+++|+..++..++. |++.|++++..+.
T Consensus 74 ~t~L~~A~~~g~~~~----------------v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 137 (299)
T 1s70_B 74 LTALHQACIDDNVDM----------------VKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNS 137 (299)
T ss_dssp CBHHHHHHHTTCHHH----------------HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCC
Confidence 489999999999974 88999999999999999999999999999988877 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-CCCc---------------------------CCCCCCCcHHHHHHhcChHH----
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRY-GGKL---------------------------VPDKFGKSPINDAAENQQME---- 128 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~---------------------------~~~~~g~~~l~~a~~~~~~~---- 128 (207)
.|.||||+|+..++.+++++++.. +.++ ..+..|.||||+|+..++.+
T Consensus 138 ~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 217 (299)
T 1s70_B 138 EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217 (299)
T ss_dssp TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHH
Confidence 999999999999999998877653 2221 35678999999999999887
Q ss_pred HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHH
Q psy14140 129 VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAE 184 (207)
Q Consensus 129 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~ 184 (207)
|++.|++++..|..|.||||+|+..|+.+++++|+++|+++ .++..|+|||++|.+
T Consensus 218 Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 56899999999999999999999999999999999999999 689999999999965
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=7.4e-30 Score=174.48 Aligned_cols=153 Identities=25% Similarity=0.305 Sum_probs=100.5
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||.|+.+|+.++ +++|+++|++++..+..+.+|++.|+. ++..+.. |++.|++++.++..
T Consensus 7 ~~L~~A~~~g~~~~----------------v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~ 69 (162)
T 1ihb_A 7 NELASAAARGDLEQ----------------LTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT 69 (162)
T ss_dssp HHHHHHHHHTCHHH----------------HHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT
T ss_pred hHHHHHHHcCCHHH----------------HHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC
Confidence 56666666666653 555555666666666566666655555 4444433 45556666666666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHH
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCVRW 161 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 161 (207)
|.||||+|+..++.+++++|++.| ++++..+..|.||||+|+..|+.+++++
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g----------------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 121 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQ----------------------------ADVNIEDNEGNLPLHLAAKEGHLRVVEF 121 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT----------------------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC----------------------------CCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 666666666666666666665554 4566677778888888888888888888
Q ss_pred HHHhCCCc--cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 162 LLRYGGKL--VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 162 Ll~~g~~~--~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
|+++|++. ..+..|+|||++|+..|+.++ ++.|++.|++
T Consensus 122 Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~------~~~Ll~~GAd 162 (162)
T 1ihb_A 122 LVKHTASNVGHRNHKGDTACDLARLYGRNEV------VSLMQANGAG 162 (162)
T ss_dssp HHHHSCCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHHTC--
T ss_pred HHHccCCCCCCcCCCCCcHHHHHHHcCCHHH------HHHHHHhCCC
Confidence 88888774 577778888888888888776 6677777664
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.1e-29 Score=173.53 Aligned_cols=145 Identities=32% Similarity=0.506 Sum_probs=111.6
Q ss_pred ccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChH
Q psy14140 50 KLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQM 127 (207)
Q Consensus 50 ~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~ 127 (207)
+.++++.|+..++.+++. |++.|++++..|..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 345666666666666554 55667777777777777777777777777777777777776 6677777777777777766
Q ss_pred H----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 128 E----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 128 ~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
+ +++.|++++..+..|.||||+|+..++.+++++|+++|+++ .++..|.|||++|+..++.+++++|
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 5 44677788888888999999999999999999999999998 6888899999999999988884433
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.3e-29 Score=172.05 Aligned_cols=118 Identities=26% Similarity=0.376 Sum_probs=99.0
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCH
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHA 156 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~ 156 (207)
..|||+.|+..|+.+++++|++.|.++ ..+..|.||||+|+. ++.+ +++.|++++..+..|.||||.|+..|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 457788888888888888888777777 777778888888777 6665 4567888888999999999999999999
Q ss_pred HHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 157 DCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 157 ~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
+++++|+++|+++ .++..|+||||+|+..|+.++ ++.|++.|++
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~~g~~ 128 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRV------VEFLVKHTAS 128 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHHHSCC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH------HHHHHHccCC
Confidence 9999999999999 688999999999999999887 6666766664
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.3e-29 Score=172.98 Aligned_cols=150 Identities=24% Similarity=0.343 Sum_probs=96.6
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||.|+.+|+.++ +++|++.|.+++..+..+.+|++.|+..++..+.. |++.|++++..+..
T Consensus 5 t~L~~A~~~g~~~~----------------v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 68 (167)
T 3v31_A 5 LSVHQLAAQGEMLY----------------LATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG 68 (167)
T ss_dssp CCHHHHHHTTCHHH----------------HHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred chHHHHHHCCCHHH----------------HHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC
Confidence 66666666666653 55555555555555555555555555555544443 44555555555555
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHH
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCVRW 161 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 161 (207)
|.||||+|+..++.+++++|++. |++++..+..|.||||+|+..|+.+++++
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~----------------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 120 (167)
T 3v31_A 69 RESALSLACSKGYTDIVKMLLDC----------------------------GVDVNEYDWNGGTPLLYAVHGNHVKCVKM 120 (167)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH----------------------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHC----------------------------CCCCCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence 55555555555555555555554 45566667777788888888888888888
Q ss_pred HHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHH
Q psy14140 162 LLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPV 196 (207)
Q Consensus 162 Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~ 196 (207)
|+++|+++ .++..|+|||++|+..|+.+++++|..
T Consensus 121 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 121 LLESGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 88888877 577778888888888888887666543
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.2e-28 Score=169.84 Aligned_cols=149 Identities=25% Similarity=0.308 Sum_probs=136.1
Q ss_pred hhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHc
Q psy14140 14 VKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASR 92 (207)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~ 92 (207)
...+..++..+.. +++++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++..|..|.||||+|+..
T Consensus 15 ~~~l~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 15 GKKLLEAARAGRD----DEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHHHHHTCH----HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHcCCH----HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 3445566666666 8999999999999999999999999999999888776 7799999999999999999999999
Q ss_pred CCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhC
Q psy14140 93 GHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG 166 (207)
Q Consensus 93 ~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 166 (207)
++.+++++|++.|+++ ..+..|.||||+|+..++.+ +++.|++++..|..|.||+++|+..++.+++++|++.|
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999 88999999999999999887 56799999999999999999999999999999999875
No 54
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.5e-29 Score=176.55 Aligned_cols=149 Identities=19% Similarity=0.236 Sum_probs=139.2
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||+|+..|+.++ +++|+++|++++..+..+.+|+++|+..++..+.. |++.|++++..|.
T Consensus 36 ~t~L~~A~~~g~~~~----------------v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 36 RTPLMVACMLGMENA----------------IDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp CCHHHHHHHHTCGGG----------------HHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 489999999999985 77888889999999999999999999999988776 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||+|+..++.+++++|++.|+++ .++..|.||||+|+..++.+ +++.|++++..|..|.||+++|+..|+
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc
Confidence 9999999999999999999999999999 89999999999999999887 567999999999999999999999999
Q ss_pred HHHHHHHHHhC
Q psy14140 156 ADCVRWLLRYG 166 (207)
Q Consensus 156 ~~~~~~Ll~~g 166 (207)
.+++++|+++|
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999865
No 55
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.5e-28 Score=168.81 Aligned_cols=121 Identities=25% Similarity=0.322 Sum_probs=109.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||.|+..|+.+++++|++.+.++ .++..|.||||+|+..++.+ +++.|++++..+..|.||||.|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 5789999999999999999999998888 88889999999999999877 567899999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
.+++++|+++|+++ ..+..|.||||+|+..++.++ ++.|++.|++|
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~~g~~~ 128 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKC------VKMLLESGADP 128 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHHTTCCT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHH------HHHHHHcCCCC
Confidence 99999999999999 688999999999999999887 66677777764
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=1.1e-29 Score=183.91 Aligned_cols=168 Identities=17% Similarity=0.200 Sum_probs=149.4
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCC------
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVD------ 74 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~------ 74 (207)
.||||+|+.+|+.++ +++|+++|++++..+..+.+|+++|+..++..+.. |++.|.+
T Consensus 46 ~t~L~~A~~~~~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 109 (236)
T 1ikn_D 46 QTPLHLAVITNQPEI----------------AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI 109 (236)
T ss_dssp CCHHHHHHHTTCHHH----------------HHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCG
T ss_pred CCHHHHHHHcCCHHH----------------HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHH
Confidence 489999999999875 77888889999999999999999999999988776 6788876
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCC-CCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHH
Q psy14140 75 PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDK-FGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLH 148 (207)
Q Consensus 75 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~-~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~ 148 (207)
++..+..|.||||+|+..++.+++++|++.|+++ .++. .|.||||+|+..++.+ |++.|++++..+..|.|||+
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 189 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGG
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHH
Confidence 4677889999999999999999999999999999 7776 9999999999999887 56899999999999999999
Q ss_pred HHHHCCCHHHHHHHHHhCCCc---cCCCCCCCHHHHHHHc
Q psy14140 149 FAASRGHADCVRWLLRYGGKL---VPDKFGKSPINDAAEN 185 (207)
Q Consensus 149 ~a~~~~~~~~~~~Ll~~g~~~---~~~~~g~t~l~~a~~~ 185 (207)
+|+..++.+++++|+++|++. .++..|.||++.+...
T Consensus 190 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 190 LTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp GCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999999999988 4778899988755543
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.1e-29 Score=187.38 Aligned_cols=162 Identities=16% Similarity=0.063 Sum_probs=144.7
Q ss_pred HHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Q psy14140 30 SNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 108 (207)
Q Consensus 30 ~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 108 (207)
.++.++|.++ +++..+..+.+|+++|+..++..++. |++.|++++..+ |.||||+|+..|+.+++++|++.|+++
T Consensus 13 ~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 88 (285)
T 3kea_A 13 KQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDD 88 (285)
T ss_dssp HHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 4667777766 57899999999999999999988776 789999999884 899999999999999999999999999
Q ss_pred -CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCC-CcHHHHHHHCCCHHHHHHHHHhCCCccCCCCCCCHHHHH
Q psy14140 109 -VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDG-ATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDA 182 (207)
Q Consensus 109 -~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~g~t~l~~a 182 (207)
.++..|.||||+|+..++.+ +++.|++++..+..| .||||+|+..|+.+++++|+++|++......|.||||+|
T Consensus 89 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A 168 (285)
T 3kea_A 89 SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHIT 168 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHH
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHH
Confidence 89999999999999999987 567899999999999 799999999999999999999998884444899999999
Q ss_pred HHcCCcceeehHH
Q psy14140 183 AENQQMEVSTVSP 195 (207)
Q Consensus 183 ~~~~~~~~~~~l~ 195 (207)
+..|+.+++++|-
T Consensus 169 ~~~g~~~~v~~Ll 181 (285)
T 3kea_A 169 IKNGHVDMMILLL 181 (285)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHcChHHHHHHHH
Confidence 9999999855443
No 58
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=6.5e-28 Score=174.42 Aligned_cols=181 Identities=25% Similarity=0.264 Sum_probs=158.6
Q ss_pred HHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCC-CCCCCHHHHHHHcCC
Q psy14140 17 SSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKD-GDGATPLHFAASRGH 94 (207)
Q Consensus 17 ~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~-~~g~t~l~~a~~~~~ 94 (207)
+..++..+.. +++++|+++|++++..+..+.+|++.|+..++..+.. |++.|.+++..+ ..|.||||+|+..++
T Consensus 13 l~~A~~~g~~----~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 13 IVKATQYGIY----ERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp HHHHHHTTCH----HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred HHHHHHcCCh----HHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 4455666655 7999999999999999999999999999999988776 779999988665 459999999999999
Q ss_pred HHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC-HHHHHHHHHhCCC
Q psy14140 95 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH-ADCVRWLLRYGGK 168 (207)
Q Consensus 95 ~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~~g~~ 168 (207)
.+++++|++.|.++ ..+..|.||+|+|+..++.+ +++.+++++..+..|.|||+.|+..++ .+++++|++.|++
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence 99999999999999 88999999999999999887 567999999999999999999996665 8999999999999
Q ss_pred c-cCCC-CCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 169 L-VPDK-FGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 169 ~-~~~~-~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+ ..+. .|.||||+|+..++.++ ++.|++.|++|
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~------v~~Ll~~g~~~ 203 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGNTTV------ISLLLEAGANV 203 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTCHHH------HHHHHHHTCCT
T ss_pred cchhhccCCCcHHHHHHHcCCHHH------HHHHHHcCCCC
Confidence 9 4554 89999999999999987 66666666654
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-28 Score=165.52 Aligned_cols=143 Identities=26% Similarity=0.404 Sum_probs=130.0
Q ss_pred cchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH
Q psy14140 51 LHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME 128 (207)
Q Consensus 51 ~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~ 128 (207)
.++++.|+..++..+.. |++.|++++ .+..|.||||+|+..|+.+++++|++.|.++ ..+..|.||||+|+..++.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 45788888888877766 778898887 5788999999999999999999999999988 88999999999999999877
Q ss_pred ----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 129 ----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 129 ----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
+++.|++++..+..|.||||+|+..++.+++++|+++|+++ .++..|.|||++|+..|+.+++++|
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 56789999999999999999999999999999999999999 6899999999999999999997765
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=3e-28 Score=168.12 Aligned_cols=147 Identities=27% Similarity=0.331 Sum_probs=133.8
Q ss_pred cchhhhhhhccCCchHH-HHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChH
Q psy14140 51 LHGKLHGCTCRKGESTK-VRDQGVD-PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQM 127 (207)
Q Consensus 51 ~~~~~~a~~~~~~~~~~-ll~~g~~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~ 127 (207)
.+|++.|+..++..+.. +++.+.+ ++..|..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 56889999998877766 7777776 8899999999999999999999999999999999 8899999999999999988
Q ss_pred H----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHH
Q psy14140 128 E----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVV 197 (207)
Q Consensus 128 ~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 197 (207)
+ +++.|++++..+..|.||||+|+..++.+++++|+++|+++ .++..|+|||++|+..++.+++++|...
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 7 56799999999999999999999999999999999999999 6889999999999999999997766443
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=3.6e-28 Score=171.66 Aligned_cols=149 Identities=23% Similarity=0.358 Sum_probs=137.0
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HH-hcCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VR-DQGVDPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll-~~g~~~~~~~ 79 (207)
.||||+|+.+|+.+ ++++|+++|++++..+..+.+|++.|+..++..+.. |+ ..+++++..+
T Consensus 40 ~t~L~~A~~~~~~~----------------~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 40 NTPLNIAVHNNDIE----------------IAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN 103 (201)
T ss_dssp CCHHHHHHHHTCHH----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred CCHHHHHHHcCCHH----------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence 48999999999987 488999999999999999999999999999988877 55 7788999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhC-CCc-CCCCCCCcHHHHHHhcCh-----HH----HhhcCCCCCCCCCCCCcHHH
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRYG-GKL-VPDKFGKSPINDAAENQQ-----ME----VRDQGVDPNLKDGDGATPLH 148 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~-~~~~~g~~~l~~a~~~~~-----~~----l~~~~~~~~~~~~~g~t~l~ 148 (207)
..|.||||+|+..++.+++++|++.+ .++ .++..|.||||+|+..+. .+ +++.|++++..|..|.|||+
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMD 183 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 99999999999999999999999999 777 899999999999998776 44 66899999999999999999
Q ss_pred HHHHCCCHHHHHHHHHhC
Q psy14140 149 FAASRGHADCVRWLLRYG 166 (207)
Q Consensus 149 ~a~~~~~~~~~~~Ll~~g 166 (207)
+|+..|+.+++++|+++|
T Consensus 184 ~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 184 YANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTCHHHHHHHHTCC
T ss_pred HHHHcCCHhHHHHHHhcC
Confidence 999999999999999876
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.7e-28 Score=168.78 Aligned_cols=154 Identities=21% Similarity=0.348 Sum_probs=133.2
Q ss_pred hcccchhhhhhhccCCchHH-HHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhc
Q psy14140 48 EAKLHGKLHGCTCRKGESTK-VRDQ-GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAEN 124 (207)
Q Consensus 48 ~~~~~~~~~a~~~~~~~~~~-ll~~-g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~ 124 (207)
+.+.++++.|+..++..++. +++. +.+++..+..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34567888899988887776 5555 7789999999999999999999999999999999988 8889999999999999
Q ss_pred ChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHH
Q psy14140 125 QQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRR 199 (207)
Q Consensus 125 ~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ 199 (207)
++.+ +++.|++++..|..|.||||+|+..++.+++++|+++|+++ .++..|+|||++|+..++.++ ++.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~------~~~ 156 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELL------RER 156 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHH------HHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHH------HHH
Confidence 9887 56789999999999999999999999999999999999999 689999999999999888776 677
Q ss_pred HhhcccCC
Q psy14140 200 LLTIQKVP 207 (207)
Q Consensus 200 ll~~~~~p 207 (207)
|++.|++|
T Consensus 157 L~~~g~~~ 164 (179)
T 3f6q_A 157 AEKMGQNL 164 (179)
T ss_dssp HHHTTCCC
T ss_pred HHHhhcCc
Confidence 77777764
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=5.1e-28 Score=163.95 Aligned_cols=144 Identities=22% Similarity=0.270 Sum_probs=132.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||.|+.+|+.++ +++|+++|.+++ .+..+.+|++.|+..++..+.. |++.|++++..+.
T Consensus 3 ~~~L~~A~~~g~~~~----------------v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 65 (153)
T 1awc_B 3 GKKLLEAARAGQDDE----------------VRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK 65 (153)
T ss_dssp HHHHHHHHHHTCHHH----------------HHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred cHHHHHHHHcCCHHH----------------HHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 479999999999985 778888888776 4778899999999999988776 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|++++..+..|.||+++|+..|+
T Consensus 66 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999 89999999999999999887 567999999999999999999999999
Q ss_pred HHHHHHH
Q psy14140 156 ADCVRWL 162 (207)
Q Consensus 156 ~~~~~~L 162 (207)
.+++++|
T Consensus 146 ~~i~~~L 152 (153)
T 1awc_B 146 EDLAEIL 152 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.3e-28 Score=186.56 Aligned_cols=134 Identities=25% Similarity=0.292 Sum_probs=104.8
Q ss_pred HHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcCh-------HHHhhcC-CCCC
Q psy14140 68 VRDQGVDPNL-KDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQ-------MEVRDQG-VDPN 137 (207)
Q Consensus 68 ll~~g~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~-------~~l~~~~-~~~~ 137 (207)
+++.|+++|. .|..|.||||+|+..|+.+++++|++.|+++ .++..|.||||+|+..++ ..+++.+ .+++
T Consensus 116 l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred HHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 4577788887 6888888888888888888888888888877 777888888888887766 3455554 5677
Q ss_pred CCCCCCCcHHHHHHH----CCCHHHHHHHHHhCC---------------------------------------------C
Q psy14140 138 LKDGDGATPLHFAAS----RGHADCVRWLLRYGG---------------------------------------------K 168 (207)
Q Consensus 138 ~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~g~---------------------------------------------~ 168 (207)
..+..|+||||+|+. .|+.+++++|++.+. +
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~ 275 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC
Confidence 777888888888887 778888888776632 3
Q ss_pred c-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 169 L-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 169 ~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+ .++..|+||||+|+..|+.++ ++.|++.|++|
T Consensus 276 ~n~~d~~G~TpLh~A~~~g~~~~------v~~Ll~~Gad~ 309 (327)
T 1sw6_A 276 LNAQDSNGDTCLNIAARLGNISI------VDALLDYGADP 309 (327)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHH------HHHHHHTTCCT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHH------HHHHHHcCCCC
Confidence 5 477889999999999999887 78888888875
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.4e-31 Score=193.07 Aligned_cols=172 Identities=17% Similarity=0.107 Sum_probs=112.8
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||+|+..|+.++ +++|+++|+++|..+..+.+|+++|+..++..+.. |++.|++++.+|..
T Consensus 23 t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~ 86 (229)
T 2vge_A 23 VLLLDAALTGELEV----------------VQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH 86 (229)
T ss_dssp HHHHHHHHHTCHHH----------------HHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHHcCCHHH----------------HHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 45666666666653 55666666666666666666666666666655554 55666666666666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC-CCCCcHHHHH--HhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHC
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPD-KFGKSPINDA--AENQQME----VRDQGVDPNLKDGDGATPLHFAASR 153 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~-~~g~~~l~~a--~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~ 153 (207)
|.||||+|+..|+.+++++|++.|+++ ..+ ..|.||||+| +..++.+ |++.|++++..+..|.|+++.++..
T Consensus 87 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 87 GWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhc
Confidence 666666666666666666666666666 443 4666666666 6666555 3456666666666666666543333
Q ss_pred CCHHHHHHHHHhCCCc---cCCCCCCCHHHHHHHcCCcceeeh
Q psy14140 154 GHADCVRWLLRYGGKL---VPDKFGKSPINDAAENQQMEVSTV 193 (207)
Q Consensus 154 ~~~~~~~~Ll~~g~~~---~~~~~g~t~l~~a~~~~~~~~~~~ 193 (207)
. ..++|++.|+++ .+|..|+||||+|+..|+.++++-
T Consensus 167 ~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 167 F---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp S---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred c---ccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 2 224555666664 478889999999999999999874
No 66
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.9e-27 Score=171.57 Aligned_cols=156 Identities=19% Similarity=0.230 Sum_probs=137.3
Q ss_pred ccchhhhhhhccCCchHH-HHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc------CCCCCCCcHHHHH
Q psy14140 50 KLHGKLHGCTCRKGESTK-VRDQ-GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL------VPDKFGKSPINDA 121 (207)
Q Consensus 50 ~~~~~~~a~~~~~~~~~~-ll~~-g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~------~~~~~g~~~l~~a 121 (207)
+.+|++.|+..++..++. |++. |++++.+|..|.||||+|+..|+.+++++|++.+.++ ..+..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 578999999999988776 6766 9999999999999999999999999999999998875 4566899999999
Q ss_pred HhcChHH----HhhcCCCCCCCCC-------------CCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHH
Q psy14140 122 AENQQME----VRDQGVDPNLKDG-------------DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAA 183 (207)
Q Consensus 122 ~~~~~~~----l~~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~ 183 (207)
+..++.+ +++.|++++..+. .|.||||+|+..|+.+++++|+++|+++ .++..|+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 9999987 5678999888765 7999999999999999999999999999 68999999999999
Q ss_pred HcCCcceeehHHHHHHHhhcccCC
Q psy14140 184 ENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 184 ~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
..++.+++. ..++.|++.|+++
T Consensus 163 ~~~~~~~~~--~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 163 LQPNKTFAC--QMYNLLLSYDGGD 184 (232)
T ss_dssp TCSCHHHHH--HHHHHHHHTTCSC
T ss_pred HcCChHHHH--HHHHHHHhcCCch
Confidence 999998742 2347778777653
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5e-28 Score=168.15 Aligned_cols=152 Identities=20% Similarity=0.276 Sum_probs=140.6
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHc-CCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQH-GTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKD 79 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~-g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~ 79 (207)
.+|||.|+..|+.++ ++.|+++ +.+++..+..+.+|++.|+..++..+.. |++.|++++..|
T Consensus 6 ~~~l~~A~~~g~~~~----------------v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 69 (179)
T 3f6q_A 6 MDDIFTQCREGNAVA----------------VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMN 69 (179)
T ss_dssp -CCHHHHHHHTCHHH----------------HHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHHcCCHHH----------------HHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC
Confidence 489999999999986 6666666 5678999999999999999999988776 779999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCC
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRG 154 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~ 154 (207)
..|.||||+|+..++.+++++|++.|+++ ..+..|.||||+|+..++.+ +++.|++++..+..|.||+++|+..+
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 70 RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999887 56899999999999999999999999
Q ss_pred CHHHHHHHHHhCCCc
Q psy14140 155 HADCVRWLLRYGGKL 169 (207)
Q Consensus 155 ~~~~~~~Ll~~g~~~ 169 (207)
+.+++++|++.|+++
T Consensus 150 ~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 150 RELLRERAEKMGQNL 164 (179)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhhcCc
Confidence 999999999999998
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.3e-29 Score=181.88 Aligned_cols=169 Identities=19% Similarity=0.212 Sum_probs=124.3
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
+||||.|+..|+.+. ++.|+++|+++++. ..+.++++.|+..++..++. |++.|++++..|.
T Consensus 6 ~t~L~~a~~~~~~~~----------------~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~ 68 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKT----------------GSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND 68 (239)
T ss_dssp ------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT
T ss_pred cccCchhhhhhhHHH----------------HHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 589999999999985 78888899988864 67789999999999988776 7799999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCC-cHHHHH--HH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGA-TPLHFA--AS 152 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~-t~l~~a--~~ 152 (207)
.|.||||+|+..|+.+++++|++.|+++ .+|..|.||||+|+..++.+ |++.|++++..+..|. ||+++| +.
T Consensus 69 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~ 148 (239)
T 1ycs_B 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEME 148 (239)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhh
Confidence 9999999999999999999999999999 89999999999999999887 5689999999998877 999999 78
Q ss_pred CCCHHHHHHHHHhCCCc-c---------CCCCCCCHHHHHHHcCC
Q psy14140 153 RGHADCVRWLLRYGGKL-V---------PDKFGKSPINDAAENQQ 187 (207)
Q Consensus 153 ~~~~~~~~~Ll~~g~~~-~---------~~~~g~t~l~~a~~~~~ 187 (207)
.|+.+++++|++.|+++ . .+..+.++++++.+.|.
T Consensus 149 ~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 149 EGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 89999999999998776 2 26678899988888775
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.3e-27 Score=163.91 Aligned_cols=153 Identities=25% Similarity=0.339 Sum_probs=133.9
Q ss_pred hhhcccchhhhhhhccCCchHH-HHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHH
Q psy14140 46 HEEAKLHGKLHGCTCRKGESTK-VRD-QGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAA 122 (207)
Q Consensus 46 ~~~~~~~~~~~a~~~~~~~~~~-ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~ 122 (207)
.+..+.++++.|+..++..+.. +++ .+.+++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 3556778999999999888776 554 67788888999999999999999999999999999999 89999999999999
Q ss_pred hcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHH
Q psy14140 123 ENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVV 197 (207)
Q Consensus 123 ~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 197 (207)
..++.+ +++.|++++..|..|.||||+|+..|+.+++++|+++|+++ .++..|+|||++|.. ++.++ +
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i------~ 156 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDI------Q 156 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHH------H
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHH------H
Confidence 999887 56899999999999999999999999999999999999999 689999999999877 77777 5
Q ss_pred HHHhhccc
Q psy14140 198 RRLLTIQK 205 (207)
Q Consensus 198 ~~ll~~~~ 205 (207)
+.|++.|+
T Consensus 157 ~~L~~~gA 164 (165)
T 3twr_A 157 DLLRGDAA 164 (165)
T ss_dssp HHHHTC--
T ss_pred HHHhhccc
Confidence 66666554
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.9e-27 Score=161.51 Aligned_cols=144 Identities=27% Similarity=0.377 Sum_probs=91.8
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHc-CCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQH-GTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~-g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
||||.|+..|+.++ ++.|+++ +.+++..+..+.+|++. +..++..+.. |++.|++++.+|.
T Consensus 4 ~~L~~A~~~g~~~~----------------v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~ 66 (156)
T 1bd8_A 4 DRLSGAAARGDVQE----------------VRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT 66 (156)
T ss_dssp HHHHHHHHHTCHHH----------------HHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hHHHHHHHhCCHHH----------------HHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC
Confidence 57777777777765 4455554 33666666667777666 5555555544 5566777777777
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCVR 160 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 160 (207)
.|.||||+|+..|+.+++++|++.|.+ ++..|..|.||||+|+..|+.++++
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------------------------~~~~~~~g~t~L~~A~~~~~~~~v~ 118 (156)
T 1bd8_A 67 SGTSPVHDAARTGFLDTLKVLVEHGAD----------------------------VNVPDGTGALPIHLAVQEGHTAVVS 118 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC----------------------------SCCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC----------------------------CCCcCCCCCcHHHHHHHhChHHHHH
Confidence 777777777777777777777766654 4555556666666666666666666
Q ss_pred HHHHhCCCc-cCCCCCCCHHHHHHHcCCcceee
Q psy14140 161 WLLRYGGKL-VPDKFGKSPINDAAENQQMEVST 192 (207)
Q Consensus 161 ~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~ 192 (207)
+|++. +++ .++..|.|||++|+..|+.++++
T Consensus 119 ~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 119 FLAAE-SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 66655 555 45556666666666666666533
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=175.38 Aligned_cols=149 Identities=22% Similarity=0.240 Sum_probs=134.5
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCC-CCCchhhcccchhhhhhhc-----cCCchHH-HHhcCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGT-LPDYHEEAKLHGKLHGCTC-----RKGESTK-VRDQGVD 74 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~-~~~~~~~~~~~~~~~a~~~-----~~~~~~~-ll~~g~~ 74 (207)
.||||+|+..|+.++ +++|+++|+ +++..+..+.+|++.|+.. ++..+.. +++.|.+
T Consensus 112 ~T~Lh~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~ 175 (276)
T 4hbd_A 112 NTALHYSVSHANFPV----------------VQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI 175 (276)
T ss_dssp CCHHHHHHHTTCHHH----------------HHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT
T ss_pred CCHHHHHHHCCCHHH----------------HHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC
Confidence 489999999999985 888899998 9999999999999998844 3333333 7799999
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hhh-cCCCCCCCCCCCCcHHH
Q psy14140 75 PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRD-QGVDPNLKDGDGATPLH 148 (207)
Q Consensus 75 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~-~~~~~~~~~~~g~t~l~ 148 (207)
.+..+..|.||||+|+..|+.+++++|++.|+++ .+|..|.||||+|+..++.+ |++ .|++++..|..|.|||+
T Consensus 176 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 176 NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALM 255 (276)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHH
Confidence 9999999999999999999999999999999999 89999999999999999887 456 89999999999999999
Q ss_pred HHHHCCCHHHHHHHHHhC
Q psy14140 149 FAASRGHADCVRWLLRYG 166 (207)
Q Consensus 149 ~a~~~~~~~~~~~Ll~~g 166 (207)
+|+..|+.+++++|++++
T Consensus 256 ~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhcc
Confidence 999999999999999874
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=3e-28 Score=180.01 Aligned_cols=173 Identities=16% Similarity=0.174 Sum_probs=134.0
Q ss_pred CCcceeehcc---CChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCC
Q psy14140 2 AHPLFIRAVS---GDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNL 77 (207)
Q Consensus 2 ~tpl~~Aa~~---g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~ 77 (207)
.||||+|+.. |+.++++.|++.+.... .++.++... .+..+..+.+|+++|+..++..++. |++.|++++.
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~---~~~~~i~~~--~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTD---SLKQFVNAS--YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTT---CHHHHHTCC--CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhcccc---chhHHhhcc--cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 4899999986 99998777776654421 122222222 2335568899999999999988877 7799999999
Q ss_pred CCC--------------CCCCHHHHHHHcCCHHHHHHHHH---hCCCc-CCCCCCCcHHHHHHhcCh---------HH--
Q psy14140 78 KDG--------------DGATPLHFAASRGHADCVRWLLR---YGGKL-VPDKFGKSPINDAAENQQ---------ME-- 128 (207)
Q Consensus 78 ~~~--------------~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~-~~~~~g~~~l~~a~~~~~---------~~-- 128 (207)
.+. .|.||||+|+..|+.+++++|++ .|+++ .+|..|.||||+|+..++ .+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 987 79999999999999999999999 89999 999999999999998775 33
Q ss_pred --HhhcCCCCC-------CCCCCCCcHHHHHHHCCCHHHHHHHHHhCC-Cc-cCCCCCCCHH
Q psy14140 129 --VRDQGVDPN-------LKDGDGATPLHFAASRGHADCVRWLLRYGG-KL-VPDKFGKSPI 179 (207)
Q Consensus 129 --l~~~~~~~~-------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~-~~-~~~~~g~t~l 179 (207)
|++.|++++ ..|..|.||||+|+..|+.+++++|+++|+ ++ .....+.+|.
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 567788876 489999999999999999999999999999 66 3444455554
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=2.3e-27 Score=157.66 Aligned_cols=128 Identities=29% Similarity=0.417 Sum_probs=116.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCC-CCc
Q psy14140 72 GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGD-GAT 145 (207)
Q Consensus 72 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~-g~t 145 (207)
+++++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+. ++.+ +++.|++++..+.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 5788999999999999999999999999999999988 888999999999999 8877 56789999999999 999
Q ss_pred HHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 146 PLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 146 ~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
|||+|+..|+.+++++|+++|+++ .++..|+|||++|+..++.++ ++.|++.|++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~------~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDI------ARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHH------HHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH------HHHHHHcCCC
Confidence 999999999999999999999999 688999999999999999887 6777777764
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=4.6e-27 Score=159.64 Aligned_cols=112 Identities=30% Similarity=0.436 Sum_probs=96.6
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhC-CCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYG-GKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~-~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
+.|||+.|+..|+.+++++|++.. .++ ..+..|.||||+ +..++.+ +++.|++++..+..|.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 357888888888888888888882 244 778888888888 7777766 567888999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
.+++++|+++|+++ .++..|+||||+|+..|+.+++++|
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 99999999999999 6889999999999999999985544
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=9.5e-28 Score=164.54 Aligned_cols=150 Identities=25% Similarity=0.364 Sum_probs=132.2
Q ss_pred CCcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCC
Q psy14140 2 AHPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDG 80 (207)
Q Consensus 2 ~tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~ 80 (207)
.||||.|+.+|+.++++.+++. .+.+++..+..+.+|++.|+..++..+.. |++.|++++.+|.
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~---------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 73 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTV---------------QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK 73 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT---------------TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hHHHHHHHHhCCHHHHHHHHHc---------------CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC
Confidence 3789999999999975544432 34566777888899999999999988776 7899999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
.|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.+ +++.|++++..|..|.||+++|.. ++
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~ 152 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GD 152 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CC
Confidence 9999999999999999999999999999 89999999999999999887 568999999999999999999777 89
Q ss_pred HHHHHHHHHhCC
Q psy14140 156 ADCVRWLLRYGG 167 (207)
Q Consensus 156 ~~~~~~Ll~~g~ 167 (207)
.+++++|+++|+
T Consensus 153 ~~i~~~L~~~gA 164 (165)
T 3twr_A 153 TDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHTC--
T ss_pred hHHHHHHhhccc
Confidence 999999998875
No 76
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=5.3e-28 Score=177.03 Aligned_cols=152 Identities=22% Similarity=0.264 Sum_probs=131.2
Q ss_pred CCcceeehcc---CChhHHHHHhhccchhhHHHHHHHHHHcCCCCC-----------chhhcccchhhhhhhccCCchHH
Q psy14140 2 AHPLFIRAVS---GDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPD-----------YHEEAKLHGKLHGCTCRKGESTK 67 (207)
Q Consensus 2 ~tpl~~Aa~~---g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~-----------~~~~~~~~~~~~a~~~~~~~~~~ 67 (207)
.||||+|+.+ |+.++++ +|+++|++++ ..+..+.+|++.|+..++..+..
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~----------------~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 107 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIM----------------PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVK 107 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHH----------------HHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHccccchHHHHH----------------HHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHH
Confidence 4899999999 9998755 4555554443 23467899999999999988877
Q ss_pred -HHhcCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHH---hCCCc-CCCCCCCcHHHHHHh--cChH
Q psy14140 68 -VRDQGVDPNLKDGD-------------GATPLHFAASRGHADCVRWLLR---YGGKL-VPDKFGKSPINDAAE--NQQM 127 (207)
Q Consensus 68 -ll~~g~~~~~~~~~-------------g~t~l~~a~~~~~~~~~~~Ll~---~~~~~-~~~~~g~~~l~~a~~--~~~~ 127 (207)
|++.|++++..+.. |.||||+|+..|+.+++++|++ .|+++ .+|..|.||||+|+. .++.
T Consensus 108 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 108 LLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp HHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred HHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 77999999999886 9999999999999999999999 89999 999999999999998 5554
Q ss_pred H-----------HhhcCCCC-------CCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 128 E-----------VRDQGVDP-------NLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 128 ~-----------l~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
+ |++.|+++ +..|..|.||||+|+..|+.+++++|+++|.+.
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 3 55788888 889999999999999999999999999998765
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=1.4e-27 Score=175.12 Aligned_cols=163 Identities=15% Similarity=0.104 Sum_probs=135.8
Q ss_pred CCcceeeh---ccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCC
Q psy14140 2 AHPLFIRA---VSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNL 77 (207)
Q Consensus 2 ~tpl~~Aa---~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~ 77 (207)
.||||+|+ .+|+.++++.|++.+..... +..++ ....+..+..+.+|+++|+..++..++. |++.|++++.
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~---~~~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGN---MREFI--NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTC---HHHHH--TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccc---hHhhh--cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 48999999 77999987777776554221 11111 2444555668999999999999988877 7799999999
Q ss_pred CC--------------CCCCCHHHHHHHcCCHHHHHHHHH---hCCCc-CCCCCCCcHHHHHHhcCh---------HH--
Q psy14140 78 KD--------------GDGATPLHFAASRGHADCVRWLLR---YGGKL-VPDKFGKSPINDAAENQQ---------ME-- 128 (207)
Q Consensus 78 ~~--------------~~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~-~~~~~g~~~l~~a~~~~~---------~~-- 128 (207)
.+ ..|.||||+|+..|+.+++++|++ .|+++ .+|..|.||||+|+..++ .+
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 98 689999999999999999999999 89999 999999999999997665 23
Q ss_pred --HhhcCCCC-------CCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 129 --VRDQGVDP-------NLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 129 --l~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
|++.|+++ +..|..|.||||+|+..|+.+++++|+++|.+.
T Consensus 202 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 56778887 678999999999999999999999999998776
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1e-26 Score=168.73 Aligned_cols=151 Identities=19% Similarity=0.181 Sum_probs=107.3
Q ss_pred hcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcC
Q psy14140 48 EAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQ 125 (207)
Q Consensus 48 ~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~ 125 (207)
..|.+|++.|+..+...... ++++|++++.. ..|.||||.|+..|+.+++++|++.|.++ .++..|.||||+|+..+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 35788999988888777655 88999999865 67899999999999999999999999988 89999999999999999
Q ss_pred hHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCC-CHHHHH--HHcCCcceeehHHHH
Q psy14140 126 QME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGK-SPINDA--AENQQMEVSTVSPVV 197 (207)
Q Consensus 126 ~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~-t~l~~a--~~~~~~~~~~~l~~~ 197 (207)
+.+ |++.|++++..|..|+||||+|+..|+.+++++|+++|+++ ..+..|. ||||+| +..|+.+++++|...
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 987 56789999999999999999999999999999999999999 5776666 999999 788999996666544
Q ss_pred HH
Q psy14140 198 RR 199 (207)
Q Consensus 198 ~~ 199 (207)
..
T Consensus 162 ~a 163 (239)
T 1ycs_B 162 QE 163 (239)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.1e-25 Score=149.47 Aligned_cols=128 Identities=23% Similarity=0.329 Sum_probs=119.8
Q ss_pred CCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCC-CCc
Q psy14140 40 GTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKF-GKS 116 (207)
Q Consensus 40 g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~-g~~ 116 (207)
+++++..+..+.+|++.|+..++..+.. |++.|++++.+|..|.||||+|+. ++.+++++|++.|+++ .++.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 5688999999999999999999988776 789999999999999999999999 9999999999999999 88888 999
Q ss_pred HHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCC
Q psy14140 117 PINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGK 168 (207)
Q Consensus 117 ~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 168 (207)
|||+|+..++.+ +++.|++++..|..|.|||++|+..++.+++++|+++|++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999887 5679999999999999999999999999999999999875
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=7.7e-26 Score=153.70 Aligned_cols=134 Identities=23% Similarity=0.267 Sum_probs=74.9
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||+|+..|+.++ +++|+++|++++..+..+.+|++.|+ .++..+.. |++.|++++.+|..
T Consensus 14 t~L~~A~~~g~~~~----------------v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~ 76 (156)
T 1bi7_B 14 DWLATAAARGRVEE----------------VRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA 76 (156)
T ss_dssp THHHHHHHHTCHHH----------------HHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT
T ss_pred HHHHHHHHcCCHHH----------------HHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC
Confidence 55555555555543 55555555555555555555555542 33333333 44555555555555
Q ss_pred CCC-HHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHH
Q psy14140 82 GAT-PLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCVR 160 (207)
Q Consensus 82 g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 160 (207)
|.| |||+|+..++.+++++|++. |++++..+..|.||||+|+..|+.++++
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~----------------------------ga~~~~~d~~g~tpl~~A~~~~~~~~v~ 128 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRA----------------------------GARLDVRDAWGRLPVDLAEELGHRDVAR 128 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHH----------------------------TCCSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHc----------------------------CCCCcccCCCCCCHHHHHHHhCHHHHHH
Confidence 555 55555555555555555555 4567777888899999999999999999
Q ss_pred HHHHhCCCc-cCCCCCCCHHHH
Q psy14140 161 WLLRYGGKL-VPDKFGKSPIND 181 (207)
Q Consensus 161 ~Ll~~g~~~-~~~~~g~t~l~~ 181 (207)
+|+++|+++ .++..|.||.+.
T Consensus 129 ~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 129 YLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHSSCC----------------
T ss_pred HHHHcCCCCCccCcCcCccccc
Confidence 999999999 678888888763
No 81
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=8.7e-26 Score=150.15 Aligned_cols=124 Identities=28% Similarity=0.496 Sum_probs=109.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcH
Q psy14140 72 GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATP 146 (207)
Q Consensus 72 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~ 146 (207)
|+|+ .+|..|.||||+|+..|+.+++++|++.|.++ .++..|.||||+|+..++.+ +++.|++++..+..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5677 78889999999999999999999999999988 88999999999999999877 567899999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHH
Q psy14140 147 LHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPV 196 (207)
Q Consensus 147 l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~ 196 (207)
||+|+..++.+++++|+++|+++ .++..|.|||++|+..+..++++++..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 99999999999999999999999 689999999999999888887666543
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.2e-24 Score=140.98 Aligned_cols=120 Identities=43% Similarity=0.695 Sum_probs=107.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
+|.||||+|+..|+.+++++|++.+.++ ..+..|.||||+|+..++.+ +++.|.+++..+..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 4789999999999999999999998888 88889999999999988877 457889999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
.+++++|+++|+++ .++..|.|||++|+..++.++ ++.|++.|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~------~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV------VKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHH------HHHHHHcCCC
Confidence 99999999999999 688899999999999998887 6777777764
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.9e-25 Score=150.21 Aligned_cols=126 Identities=31% Similarity=0.397 Sum_probs=108.4
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCc-HHH
Q psy14140 75 PNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGAT-PLH 148 (207)
Q Consensus 75 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t-~l~ 148 (207)
.+..+..|.||||+|+..|+.+++++|++.|.++ ..+..|.||||+|+ .++.+ |++.|++++..+..|.| |||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 3455678899999999999999999999999988 88899999999985 67766 56789999999999999 999
Q ss_pred HHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 149 FAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 149 ~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
+|+..|+.+++++|+++|+++ .++..|+||||+|+..|+.++ ++.|++.|++|
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~------v~~Ll~~ga~~ 137 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDV------ARYLRAAAGGT 137 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHH------HHHHSSCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHH------HHHHHHcCCCC
Confidence 999999999999999999999 688999999999999999987 67778877764
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.2e-24 Score=144.42 Aligned_cols=116 Identities=32% Similarity=0.477 Sum_probs=92.1
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHC
Q psy14140 79 DGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASR 153 (207)
Q Consensus 79 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~ 153 (207)
...+.||||+|+..|+.+++++|++.|.++ ..+..|.||||+|+..++.+ +++.|++++..|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 345667777777777777777777777777 67777777777777777765 4567778888888899999999999
Q ss_pred CCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 154 GHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 154 ~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
++.+++++|+++|+++ .++..|+|||++|+..++.+++++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 9999999999999888 6888899999999999988874443
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=3.7e-25 Score=154.45 Aligned_cols=144 Identities=16% Similarity=0.134 Sum_probs=91.3
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchh-hcccchhhhhhhccCCc----hH-HHHhcCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHE-EAKLHGKLHGCTCRKGE----ST-KVRDQGVDPN 76 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~-~~~~~~~~~a~~~~~~~----~~-~ll~~g~~~~ 76 (207)
++||.||..|+.+. ++.+++.+. +..+ ..|.+|+++|+..++.. +. .|++.|+++|
T Consensus 8 ~~l~~Aa~~g~~~~----------------~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn 69 (186)
T 3t8k_A 8 RTVSAAAMLGTYED----------------FLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK 69 (186)
T ss_dssp SSHHHHHHHSCHHH----------------HHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS
T ss_pred cHHHHHHHcCCHHH----------------HHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC
Confidence 67888888888885 444444443 4444 67788888887776532 33 3778888888
Q ss_pred CCCCCCCCHHHHHHHcCC------HHHHHHHHHhCCCc-CCCCCCC-cHHHHHHhcCh-----HH----Hhh-cCCCCCC
Q psy14140 77 LKDGDGATPLHFAASRGH------ADCVRWLLRYGGKL-VPDKFGK-SPINDAAENQQ-----ME----VRD-QGVDPNL 138 (207)
Q Consensus 77 ~~~~~g~t~l~~a~~~~~------~~~~~~Ll~~~~~~-~~~~~g~-~~l~~a~~~~~-----~~----l~~-~~~~~~~ 138 (207)
.+|..|+||||+|+..++ .+++++|++.|+++ .+|..|. ||||+|+..+. .+ +++ .|++++.
T Consensus 70 ~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 70 SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence 888888888888888776 56788888888777 6667776 77777665321 01 223 4444444
Q ss_pred CCCCCCcHHHHHHHCCCHHHHHHHHH
Q psy14140 139 KDGDGATPLHFAASRGHADCVRWLLR 164 (207)
Q Consensus 139 ~~~~g~t~l~~a~~~~~~~~~~~Ll~ 164 (207)
.|..|.||||+|++.++.+++++|.+
T Consensus 150 ~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 150 KDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp CCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 44444444444444444444444443
No 86
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=4.4e-26 Score=164.31 Aligned_cols=154 Identities=20% Similarity=0.253 Sum_probs=126.2
Q ss_pred HHHHHHcCCCCCchh---hcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Q psy14140 33 LSLLVQHGTLPDYHE---EAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 108 (207)
Q Consensus 33 v~~ll~~g~~~~~~~---~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 108 (207)
++.|+++|++++..+ .++.++++.|+..++..++. |++.|++++..|..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467788888876544 45567788899999888776 77999999999999999999999999999999999999999
Q ss_pred -CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCC-CCCCcHHHHH--HHCCCHHHHHHHHHhCCCc-cCCCCCCCHH
Q psy14140 109 -VPDKFGKSPINDAAENQQME----VRDQGVDPNLKD-GDGATPLHFA--ASRGHADCVRWLLRYGGKL-VPDKFGKSPI 179 (207)
Q Consensus 109 -~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l 179 (207)
.+|..|.||||+|+..++.+ |++.|++++..+ ..|.|||++| +..++.+++++|++.|+++ ..+..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 88999999999999999887 567899999886 5999999999 8999999999999999999 5777788888
Q ss_pred HHHHHcC
Q psy14140 180 NDAAENQ 186 (207)
Q Consensus 180 ~~a~~~~ 186 (207)
+.+....
T Consensus 161 ~~~~~~~ 167 (229)
T 2vge_A 161 WDYSAEF 167 (229)
T ss_dssp SCBCCSS
T ss_pred HHHhhcc
Confidence 8554443
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=3.2e-25 Score=154.76 Aligned_cols=148 Identities=11% Similarity=0.022 Sum_probs=124.5
Q ss_pred ccchhhhhhhccCCchHH-HHhcCCCCCCCC-CCCCCHHHHHHHcCCH----HHHHHHHHhCCCc-CCCCCCCcHHHHHH
Q psy14140 50 KLHGKLHGCTCRKGESTK-VRDQGVDPNLKD-GDGATPLHFAASRGHA----DCVRWLLRYGGKL-VPDKFGKSPINDAA 122 (207)
Q Consensus 50 ~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~Ll~~~~~~-~~~~~g~~~l~~a~ 122 (207)
+.++++.|+..++..... ++..+ ++..+ ..|.||||+|+..++. +++++|++.|+++ .++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 446778888888766554 55655 45555 6799999999999875 5899999999999 99999999999999
Q ss_pred hcCh------HH----HhhcCCCCCCCCCCCC-cHHHHHHHCC-----CHHHHHHHHH-hCCCc-cCCCCCCCHHHHHHH
Q psy14140 123 ENQQ------ME----VRDQGVDPNLKDGDGA-TPLHFAASRG-----HADCVRWLLR-YGGKL-VPDKFGKSPINDAAE 184 (207)
Q Consensus 123 ~~~~------~~----l~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~Ll~-~g~~~-~~~~~g~t~l~~a~~ 184 (207)
..++ .+ |++.|++++..|..|. ||||+|+..+ ..+++++|++ +|+++ .++..|+||||+|++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 8875 12 6789999999999999 9999999854 3568999999 99999 799999999999999
Q ss_pred cCCcceeehHHHHHH
Q psy14140 185 NQQMEVSTVSPVVRR 199 (207)
Q Consensus 185 ~~~~~~~~~l~~~~~ 199 (207)
.++.+++++|.....
T Consensus 164 ~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 164 CQKPIALKMMEDYIK 178 (186)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 999999888765543
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=3.5e-23 Score=137.36 Aligned_cols=120 Identities=27% Similarity=0.388 Sum_probs=110.1
Q ss_pred hhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhc
Q psy14140 47 EEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAEN 124 (207)
Q Consensus 47 ~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~ 124 (207)
...+.++++.|+..++..+.. |++.|++++..|..|.||||+|+..++.+++++|++.|+++ ..+..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 345678899999999988776 78999999999999999999999999999999999999999 8899999999999999
Q ss_pred ChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhC
Q psy14140 125 QQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG 166 (207)
Q Consensus 125 ~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 166 (207)
++.+ +++.|++++..|..|.|||++|+..++.+++++|++.|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9887 56799999999999999999999999999999999875
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=1e-22 Score=132.96 Aligned_cols=119 Identities=39% Similarity=0.577 Sum_probs=110.6
Q ss_pred ccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChH
Q psy14140 50 KLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQM 127 (207)
Q Consensus 50 ~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~ 127 (207)
|.+|++.|+..++..+.. |++.|++++..+..|.||||+|+..++.+++++|++.|.++ .++..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 678999999999887776 77999999999999999999999999999999999999998 8899999999999999988
Q ss_pred H----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCC
Q psy14140 128 E----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGK 168 (207)
Q Consensus 128 ~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 168 (207)
+ +++.|++++..+..|.||+++|+..++.+++++|+++|++
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7 5678999999999999999999999999999999999975
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=7.8e-24 Score=153.98 Aligned_cols=134 Identities=23% Similarity=0.287 Sum_probs=92.6
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCC-C
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKD-G 80 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~-~ 80 (207)
||||+|+..|+.++ ++.|++ |+++|..+..+.+|+++|+..++..++. |++.|++++.++ .
T Consensus 47 t~L~~A~~~g~~~~----------------v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 109 (244)
T 3ui2_A 47 TPWWTAARKADEQA----------------LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMR 109 (244)
T ss_dssp HHHHHHHTTTCHHH----------------HHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSS
T ss_pred CHHHHHHHcCCHHH----------------HHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCC
Confidence 56666666666653 556666 6677777777777777777777766655 557777777776 6
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCV 159 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 159 (207)
.|.||||+|+..|+.+++++|++.|+++ .++..|.||+|+|+..+ ....+.|||++|+..|+.+++
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-------------~~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL-------------KTTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-------------TTCCCSSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-------------hccCCCCHHHHHHHcChHHHH
Confidence 6777777777777777777777777777 67777777777776421 124566777777777777777
Q ss_pred HHHHHhC
Q psy14140 160 RWLLRYG 166 (207)
Q Consensus 160 ~~Ll~~g 166 (207)
++|++.+
T Consensus 177 ~~L~~~~ 183 (244)
T 3ui2_A 177 NVLEGQV 183 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7777653
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=9.8e-24 Score=146.96 Aligned_cols=130 Identities=22% Similarity=0.234 Sum_probs=77.4
Q ss_pred hcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC-CCCCcHHHHHHhc
Q psy14140 48 EAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPD-KFGKSPINDAAEN 124 (207)
Q Consensus 48 ~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~-~~g~~~l~~a~~~ 124 (207)
..+.+|++.|+..++..+.. |++ |++++..|..|.||||+|+..|+.+++++|++.|+++ ..+ ..|.||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 44556666666666555544 344 6666666666666666666666666666666666666 444 5666666666666
Q ss_pred ChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCccCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 125 QQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 125 ~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
++.+ +++.|++++..|..|.|||++|+..++. ..+.++|++|+..|..+++++|
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHH
Confidence 6555 3456666666666666666666553222 1345666666666666654443
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=2e-23 Score=136.18 Aligned_cols=107 Identities=26% Similarity=0.336 Sum_probs=92.7
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHC
Q psy14140 79 DGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASR 153 (207)
Q Consensus 79 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~ 153 (207)
++.|.||||+|+..|+.+++++|++.+.++ .++..|.||||+|+..++.+ +++.|++++..|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 456778889999998999999888888888 78888889999998888876 4578889999999999999999999
Q ss_pred CCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHc
Q psy14140 154 GHADCVRWLLRYGGKL-VPDKFGKSPINDAAEN 185 (207)
Q Consensus 154 ~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~ 185 (207)
++.+++++|+++|+++ .++..|+|||++|...
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999999 6899999999999443
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.2e-23 Score=153.07 Aligned_cols=158 Identities=20% Similarity=0.173 Sum_probs=128.1
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
+|+.+++..|+.+.+..+.... ...+..+.+|++.|+..++..++. |++ |++++.+|..
T Consensus 17 ~~~l~~~~~g~~~~~~~~~~~~-------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~ 76 (244)
T 3ui2_A 17 MEYLIEWKDGHSPSWVPSSYIA-------------------ADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN 76 (244)
T ss_dssp EEEEEEESSCCCCEEEEGGGSC-------------------HHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT
T ss_pred cHHHHHHHcCCCcccccccccc-------------------cccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC
Confidence 4677777777776533222111 122356788999999999888777 556 9999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCC-CCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPD-KFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~-~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
|.||||+|+..|+.+++++|++.|+++ ..+ ..|.||||+|+..++.+ |++.|++++..|..|.||||+|+..+
T Consensus 77 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~- 155 (244)
T 3ui2_A 77 GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL- 155 (244)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-
Confidence 999999999999999999999999999 666 88999999999999887 56789999999999999999998521
Q ss_pred HHHHHHHHHhCCCccCCCCCCCHHHHHHHcCCcceeehHHH
Q psy14140 156 ADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVSTVSPV 196 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~ 196 (207)
....+.|||++|+..|+.+++++|..
T Consensus 156 ---------------~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 156 ---------------KTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp ---------------TTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------hccCCCCHHHHHHHcChHHHHHHHHH
Confidence 23568999999999999998766643
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=5.7e-24 Score=148.17 Aligned_cols=114 Identities=23% Similarity=0.283 Sum_probs=104.0
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCC-CCCCcHHHHHHHC
Q psy14140 80 GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKD-GDGATPLHFAASR 153 (207)
Q Consensus 80 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~-~~g~t~l~~a~~~ 153 (207)
..|.||||+|+..|+.++++.|++ +.++ ..+..|.||||+|+..++.+ +++.|++++..+ ..|+||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 467899999999999999999999 8888 88999999999999999887 567999999888 8899999999999
Q ss_pred CCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 154 GHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 154 ~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
|+.+++++|+++|+++ .++..|+||||+|++.++.+.+..+
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~ 162 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 162 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSH
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccH
Confidence 9999999999999999 6899999999999999888776653
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=2.7e-23 Score=148.99 Aligned_cols=116 Identities=26% Similarity=0.247 Sum_probs=102.5
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hhhc-CCCCCCCCCCCCcHHHHHHH
Q psy14140 79 DGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQ-GVDPNLKDGDGATPLHFAAS 152 (207)
Q Consensus 79 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~-~~~~~~~~~~g~t~l~~a~~ 152 (207)
+..|.||||+|+..|+.+++++|++.|.++ .++..|.||||+|+..++.+ |++. |++++..|..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 456889999999999999999999999888 88899999999999999887 4456 89999999999999999999
Q ss_pred CCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 153 RGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 153 ~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
.|+.+++++|+++|+++ .++..|+|||++|+..++.++++.+
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 99999999999999999 6889999999999998888875554
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=152.08 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=91.2
Q ss_pred chhhhhhhccCCchHH-HHhcCCCCCC------CCCCCCCHHHHHHHc---CCHHHHHHHHHhCCCc-CCCCCCCcHHHH
Q psy14140 52 HGKLHGCTCRKGESTK-VRDQGVDPNL------KDGDGATPLHFAASR---GHADCVRWLLRYGGKL-VPDKFGKSPIND 120 (207)
Q Consensus 52 ~~~~~a~~~~~~~~~~-ll~~g~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~ 120 (207)
.+++.|+..++...+. +++.|++++. .+..|.||||+|+.. ++.+++++|++.|+++ .+|..|.||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 4566666666655443 6677777776 477777888887775 6777888888877777 777777888888
Q ss_pred HHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCccCCCCCCCHHHHHHHcCCc
Q psy14140 121 AAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQM 188 (207)
Q Consensus 121 a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~g~t~l~~a~~~~~~ 188 (207)
|+..++.+ |++.|++++..|..|.|||++|+..++.+++++|+++|++ .|.||||+|+..|+.
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 87777766 4567777777777788888888877888888877777665 467788877777653
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=1.7e-23 Score=138.98 Aligned_cols=126 Identities=24% Similarity=0.299 Sum_probs=109.8
Q ss_pred CCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcH
Q psy14140 40 GTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSP 117 (207)
Q Consensus 40 g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~ 117 (207)
|+++ ..+..+.+|++.|+..++..+.. |++.|++++.+|..|.||||+|+..++.+++++|++.|.++ .++..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5677 77889999999999999887776 78999999999999999999999999999999999999999 899999999
Q ss_pred HHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhC
Q psy14140 118 INDAAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYG 166 (207)
Q Consensus 118 l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 166 (207)
||+|+..++.+ +++.|++++..|..|.||+++|+..+..+++++|.+.+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999887 56899999999999999999999888888877766543
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=7.7e-26 Score=173.63 Aligned_cols=147 Identities=10% Similarity=-0.030 Sum_probs=71.3
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCC---CCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDP---NLK 78 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~---~~~ 78 (207)
||||+||.+|+.++|+.+++.+... ...+..+..+.+|+++|+..++.+++. |++.|+++ +..
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~-------------~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~ 160 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSD-------------EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ 160 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CC-------------SSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcH-------------HHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC
Confidence 7899999999998766655554310 000111223334555555555555444 44555431 111
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-C--CCCCCCcHHHHHH-hcChHHHhhcCCCCCCCCCCCCcHHHHHHHCC
Q psy14140 79 DGDGATPLHFAASRGHADCVRWLLRYGGKL-V--PDKFGKSPINDAA-ENQQMEVRDQGVDPNLKDGDGATPLHFAASRG 154 (207)
Q Consensus 79 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~--~~~~g~~~l~~a~-~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~ 154 (207)
+.. .||||+|+..|+.+++++|++.|+++ . .+..|.||||+|+ ..|+.++++.-.+-. ..|.|||+.|+..|
T Consensus 161 ~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g---a~~~taL~~Aa~~g 236 (376)
T 2aja_A 161 AEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP---VMLAYAEIHEFEYG 236 (376)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH---HHHHHHHHCTTTTT
T ss_pred CCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC---CccchHHHHHHHCC
Confidence 111 45555555555555555555555544 2 4444555555555 555555333221110 12445555555555
Q ss_pred CHHHHHHHHHhC
Q psy14140 155 HADCVRWLLRYG 166 (207)
Q Consensus 155 ~~~~~~~Ll~~g 166 (207)
+.+++++|+++|
T Consensus 237 ~~evv~lL~~~g 248 (376)
T 2aja_A 237 EKYVNPFIARHV 248 (376)
T ss_dssp TTTHHHHHHHHH
T ss_pred CHHHHHHHHhcC
Confidence 555555555443
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=8.5e-23 Score=133.17 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=75.1
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||+|+.+|+.++ +++|+++|++++..+..+.+|+++|+..++..+.. |++.|++++.+|..
T Consensus 9 ~~l~~A~~~~~~~~----------------v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 72 (123)
T 3aaa_C 9 KEFMWALKNGDLDE----------------VKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH 72 (123)
T ss_dssp HHHHHHHHTTCHHH----------------HHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred hHHHHHHHcCCHHH----------------HHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 56777777777763 66666777777777777777777777766666555 55777777777777
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME 128 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~ 128 (207)
|.||||+|+..++.+++++|++.|+++ .++..|.||+++|...+..+
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 777777777777777777777777666 66666666666664443333
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=3.8e-22 Score=149.20 Aligned_cols=131 Identities=18% Similarity=0.196 Sum_probs=106.4
Q ss_pred cceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCc------hhhcccchhhhhhhc---cCCchHH-HHhcCC
Q psy14140 4 PLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDY------HEEAKLHGKLHGCTC---RKGESTK-VRDQGV 73 (207)
Q Consensus 4 pl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~------~~~~~~~~~~~a~~~---~~~~~~~-ll~~g~ 73 (207)
|||.|+.+|+.+. ++.|++.|++++. .+..+.+|++.|+.. ++..+.. |++.|+
T Consensus 154 ~L~~A~~~g~~~~----------------v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga 217 (301)
T 2b0o_E 154 RLWTAICNRDLLS----------------VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 217 (301)
T ss_dssp HHHHHHHTTCHHH----------------HHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS
T ss_pred HHhhhhhccCHHH----------------HHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC
Confidence 4788888888874 7778889999987 688899999999887 4555554 779999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHHH----hhcCCCCCCCCCCCCcHHH
Q psy14140 74 DPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEV----RDQGVDPNLKDGDGATPLH 148 (207)
Q Consensus 74 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~l----~~~~~~~~~~~~~g~t~l~ 148 (207)
+++.+|..|.||||+|+..|+.+++++|++.|+++ .+|..|.|||++|+..++.++ ++.+.+ .|.||||
T Consensus 218 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh 291 (301)
T 2b0o_E 218 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLH 291 (301)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhH
Confidence 99999999999999999999999999999999999 999999999999999999874 445543 6889999
Q ss_pred HHHHCCCH
Q psy14140 149 FAASRGHA 156 (207)
Q Consensus 149 ~a~~~~~~ 156 (207)
+|+..|+.
T Consensus 292 ~A~~~g~~ 299 (301)
T 2b0o_E 292 VDYSWVIS 299 (301)
T ss_dssp --------
T ss_pred HHHhcCCc
Confidence 99988763
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=9e-22 Score=141.00 Aligned_cols=124 Identities=19% Similarity=0.180 Sum_probs=106.7
Q ss_pred hhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCc-CCCCCCCcHHHHHH
Q psy14140 46 HEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRY-GGKL-VPDKFGKSPINDAA 122 (207)
Q Consensus 46 ~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~-~~~~~g~~~l~~a~ 122 (207)
.+..+.++++.|+..++..++. |++.|++++..|..|.||||+|+..|+.+++++|++. |.++ .++..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 3556788999999999988776 7899999999999999999999999999999999998 8888 89999999999999
Q ss_pred hcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 123 ENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 123 ~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
..++.+ |++.|++++..+..|.|||++|+..++.++++.|+..++..
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 999887 56789999999999999999999999999999999998877
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=2.3e-20 Score=115.60 Aligned_cols=82 Identities=46% Similarity=0.779 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGHADCVR 160 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 160 (207)
+|.||||+|+..++.+++++|++.|.++ +..|..|.||||+|+..++.++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------------------n~~d~~g~t~L~~A~~~~~~~~v~ 52 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV----------------------------NAKDKNGRTPLHLAARNGHLEVVK 52 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT----------------------------TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC----------------------------cccCCCCCCHHHHHHHcCCHHHHH
Confidence 3788999999988999998888887655 344445555555555555555555
Q ss_pred HHHHhCCCc-cCCCCCCCHHHHHHHcCCcce
Q psy14140 161 WLLRYGGKL-VPDKFGKSPINDAAENQQMEV 190 (207)
Q Consensus 161 ~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~ 190 (207)
+|+++|+++ .++..|+||||+|+..|+.++
T Consensus 53 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~ 83 (93)
T 1n0q_A 53 LLLEAGADVNAKDKNGRTPLHLAARNGHLEV 83 (93)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 555555555 345555555555555555544
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=4.4e-24 Score=163.89 Aligned_cols=155 Identities=13% Similarity=0.059 Sum_probs=123.9
Q ss_pred HHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy14140 31 NCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDP---NLKDGDGATPLHFAASRGHADCVRWLLRYGG 106 (207)
Q Consensus 31 ~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~---~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 106 (207)
++++.++++|.+. .+|++.|+..|+..++. |++.|+.. +..+..|.||||+|+..|+.+++++|++.|+
T Consensus 80 ~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga 152 (376)
T 2aja_A 80 QLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152 (376)
T ss_dssp THHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred HHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 4667777777643 48999999999988877 67888732 2344567899999999999999999999997
Q ss_pred Cc----CCCCCCCcHHHHHHhcChHH----HhhcCCCCCC--CCCCCCcHHHHHH-HCCCHHHHHHHHHhCCCccCCCCC
Q psy14140 107 KL----VPDKFGKSPINDAAENQQME----VRDQGVDPNL--KDGDGATPLHFAA-SRGHADCVRWLLRYGGKLVPDKFG 175 (207)
Q Consensus 107 ~~----~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~~~~Ll~~g~~~~~~~~g 175 (207)
+. ..+.. .||||+|+..|+.+ |++.|++++. .+..|.||||+|+ ..|+.+++++|++.|++ |
T Consensus 153 d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~------~ 225 (376)
T 2aja_A 153 TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM------L 225 (376)
T ss_dssp TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH------H
T ss_pred CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc------c
Confidence 52 22222 89999999999988 5678888776 7788999999999 99999999999987642 8
Q ss_pred CCHHHHHHHcCCcceeehHHHHHH
Q psy14140 176 KSPINDAAENQQMEVSTVSPVVRR 199 (207)
Q Consensus 176 ~t~l~~a~~~~~~~~~~~l~~~~~ 199 (207)
.|||++|+.+|+.+++++|.....
T Consensus 226 ~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 226 AYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp HHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred chHHHHHHHCCCHHHHHHHHhcCc
Confidence 899999999999999887755443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=2.5e-20 Score=137.92 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=85.6
Q ss_pred CHHHHHHHcCCHHHHHHHHHhCCCc-------CCCCCCCcHHHHHHhc---ChHH----HhhcCCCCCCCCCCCCcHHHH
Q psy14140 84 TPLHFAASRGHADCVRWLLRYGGKL-------VPDKFGKSPINDAAEN---QQME----VRDQGVDPNLKDGDGATPLHF 149 (207)
Q Consensus 84 t~l~~a~~~~~~~~~~~Ll~~~~~~-------~~~~~g~~~l~~a~~~---~~~~----l~~~~~~~~~~~~~g~t~l~~ 149 (207)
++|+.|+..++.+.++.+++.|.++ ..+..|.||||+|+.. ++.+ |++.|++++..|..|+||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 4677777777777777777777764 2366677778777777 5554 456777888888888888888
Q ss_pred HHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccC
Q psy14140 150 AASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKV 206 (207)
Q Consensus 150 a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~ 206 (207)
|+..|+.+++++|+++|+++ .++..|+||||+|+..|+.++ ++.|++.|++
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~------v~~Ll~~ga~ 263 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC------EELLTQALSG 263 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH------HHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHH------HHHHHHcCCC
Confidence 88888888888888888888 577778888888888887776 4455555543
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.4e-20 Score=149.95 Aligned_cols=118 Identities=19% Similarity=0.191 Sum_probs=86.5
Q ss_pred chhhhhhhccCCchHH-HHhcCCCCCCC------CCCCCCHHHHHHH---cCCHHHHHHHHHhCCCc-CCCCCCCcHHHH
Q psy14140 52 HGKLHGCTCRKGESTK-VRDQGVDPNLK------DGDGATPLHFAAS---RGHADCVRWLLRYGGKL-VPDKFGKSPIND 120 (207)
Q Consensus 52 ~~~~~a~~~~~~~~~~-ll~~g~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~ 120 (207)
..++.|+..++...+. |++.|+++|.. +..|.||||+|+. .|+.+++++|++.|+++ .+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 3466677666655554 66777777766 6677788888755 77777888888877777 777777888888
Q ss_pred HHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 121 AAENQQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 121 a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
|+..|+.+ |++.|++++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 87777766 45677777777777778888887777788888777777777
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.3e-20 Score=148.61 Aligned_cols=121 Identities=20% Similarity=0.236 Sum_probs=107.4
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc-CC------CCCCCcHHHHHHh---cChHH----HhhcCCCCCCCCCCCCcH
Q psy14140 81 DGATPLHFAASRGHADCVRWLLRYGGKL-VP------DKFGKSPINDAAE---NQQME----VRDQGVDPNLKDGDGATP 146 (207)
Q Consensus 81 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~------~~~g~~~l~~a~~---~~~~~----l~~~~~~~~~~~~~g~t~ 146 (207)
...+.|+.|+..|+.++++.|++.|+++ .. +..|.||||+|+. .++.+ |++.|++++..|..|+||
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 3347899999999999999999999988 55 7899999999966 77766 568999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHHHHHhhcccCC
Q psy14140 147 LHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVVRRLLTIQKVP 207 (207)
Q Consensus 147 l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~~~~~p 207 (207)
||+|+..|+.+++++|+++|+++ .+|..|+||||+|+..|+.++ ++.|++.|++|
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~------~~~Ll~~ga~~ 266 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC------EELLEQAQAGT 266 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHH------HHHHHHTCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH------HHHHHHhCCCC
Confidence 99999999999999999999999 689999999999999999988 77778888764
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=3.1e-20 Score=137.41 Aligned_cols=167 Identities=17% Similarity=0.173 Sum_probs=125.5
Q ss_pred CcceeehccCChhHHHHHhhccch---------hh---HHHHHH-HHHHcC--CCCCchhhcccchhhhhhhccCCchHH
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDR---------LM---LSNCLS-LLVQHG--TLPDYHEEAKLHGKLHGCTCRKGESTK 67 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~---------~~---~~~~v~-~ll~~g--~~~~~~~~~~~~~~~~a~~~~~~~~~~ 67 (207)
++++.+...|+....++....... .. ..+-++ ..+.+. ...+........+++.|+..++.....
T Consensus 68 ~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~d~~~~~ 147 (278)
T 1dcq_A 68 SELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLL 147 (278)
T ss_dssp GGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhcccHHHH
Confidence 567778888887666554322110 01 111122 112222 122233334456677777777655544
Q ss_pred -HHhcCCCC------CCCCCCCCCHHHHHHHc---CCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----Hhhc
Q psy14140 68 -VRDQGVDP------NLKDGDGATPLHFAASR---GHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQ 132 (207)
Q Consensus 68 -ll~~g~~~------~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~ 132 (207)
+++.|+++ +..+..|.||||+|+.. ++.+++++|++.|+++ .+|..|.||||+|+..|+.+ |++.
T Consensus 148 ~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 227 (278)
T 1dcq_A 148 QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227 (278)
T ss_dssp HHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 78899984 45588999999999998 8999999999999999 89999999999999999987 5689
Q ss_pred CCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc
Q psy14140 133 GVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL 169 (207)
Q Consensus 133 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 169 (207)
|++++..|..|.||||+|+..|+.+++++|+++|++.
T Consensus 228 gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999998765
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=3.2e-20 Score=142.01 Aligned_cols=136 Identities=20% Similarity=0.204 Sum_probs=99.3
Q ss_pred ccchhhhhhhc-cCCchHH-HHhcCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhc
Q psy14140 50 KLHGKLHGCTC-RKGESTK-VRDQGVDPNLKD--GDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAEN 124 (207)
Q Consensus 50 ~~~~~~~a~~~-~~~~~~~-ll~~g~~~~~~~--~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~ 124 (207)
+.++++.|+.. ++..++. |++.|++++..+ ..|.||||+|+..++.+++++|++.|+++ ..|..|.||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34567777776 6655554 778999999888 78899999999999999999999999888 8888999999999988
Q ss_pred ChHH----HhhcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHhCCCc----cCCCCCCCHHHHHHHc
Q psy14140 125 QQME----VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL----VPDKFGKSPINDAAEN 185 (207)
Q Consensus 125 ~~~~----l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~----~~~~~g~t~l~~a~~~ 185 (207)
++.+ |++.|++++..|..|.||||+|+..++.+++++|+..+... ..+..+.|+++.+...
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 8877 56789999999999999999999999999999998776443 2445577777766554
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.8e-20 Score=143.43 Aligned_cols=117 Identities=21% Similarity=0.305 Sum_probs=107.7
Q ss_pred CCCCHHHHHHHc-CCHHHHHHHHHhCCCc-CCC--CCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHHH
Q psy14140 81 DGATPLHFAASR-GHADCVRWLLRYGGKL-VPD--KFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAAS 152 (207)
Q Consensus 81 ~g~t~l~~a~~~-~~~~~~~~Ll~~~~~~-~~~--~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~~ 152 (207)
.+.++||.|+.. ++.++++.|++.|+++ ..+ ..|.||||+|+..++.+ |++.|++++..|..|+||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 455799999999 9999999999999999 666 89999999999999887 568999999999999999999999
Q ss_pred CCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehHHHH
Q psy14140 153 RGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVSPVV 197 (207)
Q Consensus 153 ~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 197 (207)
.|+.+++++|+++|+++ ..+..|.||||+|+..++.+++++|...
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999999 6899999999999999999998777544
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2.5e-20 Score=119.91 Aligned_cols=103 Identities=35% Similarity=0.481 Sum_probs=91.0
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHHHhcChHH----HhhcCCCCCCCCCCCCcHHHHHH
Q psy14140 77 LKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQME----VRDQGVDPNLKDGDGATPLHFAA 151 (207)
Q Consensus 77 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a~~~~~~~----l~~~~~~~~~~~~~g~t~l~~a~ 151 (207)
.+|..|.||||+|+..++.+++++|++.|.++ ..+..|.||||+|+..++.+ |++.|++++..|..|.|||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 56788999999999999999999999999888 88899999999999998877 55789999999999999999999
Q ss_pred HCCCHHHHHHHHHhCCCc-cCCCCCCCHH
Q psy14140 152 SRGHADCVRWLLRYGGKL-VPDKFGKSPI 179 (207)
Q Consensus 152 ~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l 179 (207)
..++.+++++|+++|+++ .++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999 5777787774
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.8e-20 Score=113.18 Aligned_cols=48 Identities=46% Similarity=0.762 Sum_probs=30.7
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcce
Q psy14140 143 GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEV 190 (207)
Q Consensus 143 g~t~l~~a~~~~~~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~ 190 (207)
|+||||+|+..|+.+++++|++.|+++ .++..|+||||+|+..++.++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~ 50 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV 50 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 566666666666666666666666666 456666666666666666655
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=3.3e-19 Score=114.62 Aligned_cols=99 Identities=22% Similarity=0.258 Sum_probs=56.1
Q ss_pred CcceeehccCChhHHHHHhhccchhhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCC
Q psy14140 3 HPLFIRAVSGDVKCSSQAGSMGDRLMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGD 81 (207)
Q Consensus 3 tpl~~Aa~~g~~~~~~~~~~~~~~~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~ 81 (207)
||||+|+.+|+.++ +++|+++|++++..+..+.+|++.|+..++..+.. |++.|++++.+|..
T Consensus 11 t~L~~A~~~~~~~~----------------~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~ 74 (115)
T 2l6b_A 11 TPLHNAAKNGHAEE----------------VKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKD 74 (115)
T ss_dssp CHHHHHHHHTCHHH----------------HHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTT
T ss_pred CHHHHHHHcCCHHH----------------HHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC
Confidence 56666666666553 55555555666665656666666665555555444 44556666666666
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcH
Q psy14140 82 GATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSP 117 (207)
Q Consensus 82 g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~ 117 (207)
|.||||+|+..++.+++++|++.|+++ .++..|.+|
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666666666555 444444443
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=2.9e-18 Score=109.40 Aligned_cols=91 Identities=35% Similarity=0.532 Sum_probs=73.5
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcCCCCCCCcHHHHHHhcChHHHhhcCCCCCCCCCCCCcHHHHHHHCCC
Q psy14140 76 NLKDGDGATPLHFAASRGHADCVRWLLRYGGKLVPDKFGKSPINDAAENQQMEVRDQGVDPNLKDGDGATPLHFAASRGH 155 (207)
Q Consensus 76 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~g~~~l~~a~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~ 155 (207)
...|..|.|+||+|+..|+.+++++|++.|. +++..|..|.||||+|+..|+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----------------------------~i~~~d~~g~tpLh~A~~~~~ 69 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGA----------------------------DVAAKDKNGSTPLHLAARNGH 69 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTC----------------------------CTTCCCTTCCCHHHHHHHTTC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCC----------------------------CCCccCCCCCCHHHHHHHcCC
Confidence 3456788889999999999999988888765 456667788888888898999
Q ss_pred HHHHHHHHHhCCCc-cCCCCCCCHHHHHHHcCCcceeehH
Q psy14140 156 ADCVRWLLRYGGKL-VPDKFGKSPINDAAENQQMEVSTVS 194 (207)
Q Consensus 156 ~~~~~~Ll~~g~~~-~~~~~g~t~l~~a~~~~~~~~~~~l 194 (207)
.+++++|+++|+++ .++..|+||||+|+..|+.+++++|
T Consensus 70 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 70 LEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999888 6888899999999999988886654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=1.5e-16 Score=101.33 Aligned_cols=88 Identities=27% Similarity=0.468 Sum_probs=70.9
Q ss_pred CchhhcccchhhhhhhccCCchHH-HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-CCCCCCCcHHHHH
Q psy14140 44 DYHEEAKLHGKLHGCTCRKGESTK-VRDQGVDPNLKDGDGATPLHFAASRGHADCVRWLLRYGGKL-VPDKFGKSPINDA 121 (207)
Q Consensus 44 ~~~~~~~~~~~~~a~~~~~~~~~~-ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~g~~~l~~a 121 (207)
...+..+.++++.|+..++..+.. |++.|++++.+|..|.||||+|+..++.+++++|++.|+++ .++..|.||+|+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 344566778888888888877666 67888888888888999999999999999999999988888 8888899999999
Q ss_pred HhcChHHHhh
Q psy14140 122 AENQQMEVRD 131 (207)
Q Consensus 122 ~~~~~~~l~~ 131 (207)
+..++.++++
T Consensus 98 ~~~~~~~~~~ 107 (110)
T 2zgd_A 98 IDNGNEDLAE 107 (110)
T ss_dssp HHHTCHHHHH
T ss_pred HHcCCHHHHH
Confidence 9888877553
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=57.94 E-value=9.7 Score=18.28 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=14.8
Q ss_pred HHHHHHHcCCHHHHHHHH
Q psy14140 85 PLHFAASRGHADCVRWLL 102 (207)
Q Consensus 85 ~l~~a~~~~~~~~~~~Ll 102 (207)
.+..||+.|+.+.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 357889999999998874
No 116
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=47.86 E-value=6.7 Score=24.56 Aligned_cols=23 Identities=9% Similarity=-0.101 Sum_probs=15.4
Q ss_pred cceeehccCChhHHHHHhhccch
Q psy14140 4 PLFIRAVSGDVKCSSQAGSMGDR 26 (207)
Q Consensus 4 pl~~Aa~~g~~~~~~~~~~~~~~ 26 (207)
++-.|+.+|+.+++.-|+++..+
T Consensus 38 AietAa~S~d~elaEeLL~yFVe 60 (125)
T 3qil_A 38 AMQYASESKDTELAEELLQWFLQ 60 (125)
T ss_dssp HHHTTTSSCCSHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 35578889999986655444443
No 117
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=44.85 E-value=19 Score=20.31 Aligned_cols=48 Identities=8% Similarity=0.093 Sum_probs=34.8
Q ss_pred CHHHHHHHHHhCCCcc-CCCCCCCHHHHHHHcCCcceeehHHHHHHHhh
Q psy14140 155 HADCVRWLLRYGGKLV-PDKFGKSPINDAAENQQMEVSTVSPVVRRLLT 202 (207)
Q Consensus 155 ~~~~~~~Ll~~g~~~~-~~~~g~t~l~~a~~~~~~~~~~~l~~~~~ll~ 202 (207)
+.+.++.|.++|.+.. ....+..+|..|+.....+.-.++..++.++.
T Consensus 16 ~P~~~~vf~~~G~~C~gC~~a~~~tLeeA~~~hgiD~d~ll~eLn~~i~ 64 (76)
T 2k53_A 16 DRGTAPIFINNGMHCLGCPSSMGESIEDACAVHGIDADKLVKELNEYFE 64 (76)
T ss_dssp CGGGHHHHHHTTCCCCSSCCCCCSBHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCccccccHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 5677888889988762 33345667888888777788788877777664
No 118
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=36.19 E-value=29 Score=18.23 Aligned_cols=24 Identities=29% Similarity=0.367 Sum_probs=19.9
Q ss_pred HHHHHHHcCCcceeehHHHHHHHh
Q psy14140 178 PINDAAENQQMEVSTVSPVVRRLL 201 (207)
Q Consensus 178 ~l~~a~~~~~~~~~~~l~~~~~ll 201 (207)
+|..|+..|..|-..||+.+..-|
T Consensus 16 aLdeaIe~GPWe~SNFLRvIGKnL 39 (57)
T 3fxd_A 16 ALNDAIEKGPWDKSNFLRVIGKKL 39 (57)
T ss_dssp HHHHHHHHSCTTSCHHHHHHHHHH
T ss_pred HHHHHHHcCCchHHHHHHHHHHhH
Confidence 788999999999999998776543
No 119
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=31.62 E-value=49 Score=26.15 Aligned_cols=130 Identities=14% Similarity=0.070 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHcCCCCCchhhcccchhhhhhhccCC--------------c-hHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy14140 27 LMLSNCLSLLVQHGTLPDYHEEAKLHGKLHGCTCRKG--------------E-STKVRDQGVDPNLKDGDGATPLHFAAS 91 (207)
Q Consensus 27 ~~~~~~v~~ll~~g~~~~~~~~~~~~~~~~a~~~~~~--------------~-~~~ll~~g~~~~~~~~~g~t~l~~a~~ 91 (207)
....++.+.+.+.|..+|.... +.++.+|..... . ...+.+.|+.+|... -.+.+...++
T Consensus 43 ~~A~~lf~~M~~~Gv~pd~~ty---n~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t--yn~lI~~~~~ 117 (501)
T 4g26_A 43 LEALRLYDEARRNGVQLSQYHY---NVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT--FTNGARLAVA 117 (501)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHH---HHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHhHH---HHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH--HHHHHHHHHh
Confidence 3345778888889998877553 344444433221 0 112567787766531 1234455677
Q ss_pred cCCHHHHHHHH----HhCCCcCCCCCCCcHH-HHHHhcChHH--------HhhcCCCCCCCCCCCCcHHHHHHHCCCHHH
Q psy14140 92 RGHADCVRWLL----RYGGKLVPDKFGKSPI-NDAAENQQME--------VRDQGVDPNLKDGDGATPLHFAASRGHADC 158 (207)
Q Consensus 92 ~~~~~~~~~Ll----~~~~~~~~~~~g~~~l-~~a~~~~~~~--------l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 158 (207)
.|..+-...++ +.|..+ |..-.+.+ ...+..|..+ +.+.|..++... -.+.+...++.|..+-
T Consensus 118 ~g~~~~A~~l~~~M~~~g~~P--d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~~Li~~~~~~g~~d~ 193 (501)
T 4g26_A 118 KDDPEMAFDMVKQMKAFGIQP--RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LAALLKVSMDTKNADK 193 (501)
T ss_dssp HTCHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCC--ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HHHHHHHHhhCCCHHH
Confidence 88875444333 334322 22223333 4446666654 456777765432 1234455677788766
Q ss_pred HHHHHHh
Q psy14140 159 VRWLLRY 165 (207)
Q Consensus 159 ~~~Ll~~ 165 (207)
+..+++.
T Consensus 194 A~~ll~~ 200 (501)
T 4g26_A 194 VYKTLQR 200 (501)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
Done!