Query psy14142
Match_columns 76
No_of_seqs 104 out of 2299
Neff 11.9
Searched_HMMs 46136
Date Fri Aug 16 20:36:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412|consensus 99.8 1.2E-19 2.5E-24 88.5 5.4 69 4-72 62-130 (226)
2 PF13637 Ank_4: Ankyrin repeat 99.8 1.8E-18 4E-23 70.6 6.7 54 14-68 1-54 (54)
3 PF13857 Ank_5: Ankyrin repeat 99.8 9.4E-19 2E-23 71.9 4.5 53 2-55 3-56 (56)
4 PF12796 Ank_2: Ankyrin repeat 99.8 1.5E-17 3.3E-22 73.9 7.0 58 14-72 26-83 (89)
5 KOG4412|consensus 99.7 1E-17 2.2E-22 81.8 5.5 68 4-72 96-163 (226)
6 PHA02736 Viral ankyrin protein 99.7 4.6E-17 1E-21 78.6 7.7 71 2-72 79-150 (154)
7 PHA02795 ankyrin-like protein; 99.7 4.2E-17 9.1E-22 88.7 7.9 70 2-72 209-286 (437)
8 PHA02743 Viral ankyrin protein 99.7 9.8E-17 2.1E-21 78.4 7.9 69 3-71 82-151 (166)
9 KOG4214|consensus 99.7 5.5E-17 1.2E-21 71.7 5.3 68 4-73 25-92 (117)
10 PHA02946 ankyin-like protein; 99.7 1.6E-16 3.5E-21 87.2 8.0 70 2-72 60-131 (446)
11 KOG0509|consensus 99.7 7.6E-17 1.6E-21 89.5 6.3 68 4-72 68-136 (600)
12 PHA02741 hypothetical protein; 99.7 3.6E-16 7.8E-21 76.6 8.1 66 4-70 50-120 (169)
13 PHA02875 ankyrin repeat protei 99.7 2.4E-16 5.2E-21 85.6 8.1 70 2-72 123-192 (413)
14 PHA02989 ankyrin repeat protei 99.7 2.4E-16 5.1E-21 87.3 7.8 69 3-72 245-313 (494)
15 KOG0509|consensus 99.7 1.4E-16 3.1E-21 88.4 6.4 70 1-71 98-168 (600)
16 PHA02878 ankyrin repeat protei 99.7 4.3E-16 9.3E-21 86.0 7.9 68 3-71 156-224 (477)
17 PHA03095 ankyrin-like protein; 99.7 4.7E-16 1E-20 85.4 7.8 69 3-72 246-314 (471)
18 PHA02791 ankyrin-like protein; 99.7 7.1E-16 1.5E-20 80.6 7.8 67 3-70 83-150 (284)
19 PHA02743 Viral ankyrin protein 99.7 6E-16 1.3E-20 75.6 7.0 66 3-69 46-115 (166)
20 PHA02884 ankyrin repeat protei 99.7 9.6E-16 2.1E-20 80.5 8.0 70 2-72 54-128 (300)
21 KOG0512|consensus 99.7 3.1E-16 6.7E-21 76.4 5.7 65 7-72 90-154 (228)
22 PLN03192 Voltage-dependent pot 99.7 7.5E-16 1.6E-20 89.4 7.9 70 2-72 546-615 (823)
23 PHA03100 ankyrin repeat protei 99.7 1E-15 2.2E-20 84.3 7.9 70 2-72 238-307 (480)
24 PTZ00322 6-phosphofructo-2-kin 99.7 1.1E-15 2.4E-20 87.1 8.1 69 2-71 103-171 (664)
25 PHA02874 ankyrin repeat protei 99.7 1.5E-15 3.2E-20 83.1 8.1 67 4-71 114-180 (434)
26 PHA02874 ankyrin repeat protei 99.7 1.5E-15 3.3E-20 83.0 8.0 70 2-72 145-214 (434)
27 PHA02741 hypothetical protein; 99.6 1.2E-15 2.6E-20 74.7 6.6 71 2-72 85-156 (169)
28 PHA02791 ankyrin-like protein; 99.6 2.6E-15 5.7E-20 78.6 7.8 67 3-72 52-118 (284)
29 PHA02798 ankyrin-like protein; 99.6 2E-15 4.4E-20 83.6 7.6 70 2-72 97-172 (489)
30 PHA02798 ankyrin-like protein; 99.6 2.6E-15 5.6E-20 83.2 8.0 68 4-72 248-315 (489)
31 PHA02878 ankyrin repeat protei 99.6 2.7E-15 5.9E-20 82.9 7.9 70 2-72 189-259 (477)
32 PHA02730 ankyrin-like protein; 99.6 2.4E-15 5.3E-20 85.3 7.7 66 6-72 32-103 (672)
33 KOG4177|consensus 99.6 1.1E-15 2.4E-20 90.0 6.4 70 3-73 529-598 (1143)
34 PHA02859 ankyrin repeat protei 99.6 5.1E-15 1.1E-19 74.6 7.9 68 3-71 112-182 (209)
35 KOG0508|consensus 99.6 3.3E-16 7.1E-21 85.4 3.3 70 2-72 138-207 (615)
36 KOG0515|consensus 99.6 3.6E-15 7.9E-20 82.4 6.2 67 6-73 575-641 (752)
37 PHA02716 CPXV016; CPX019; EVM0 99.6 3.7E-15 8.1E-20 85.6 6.3 68 4-72 487-564 (764)
38 PHA03095 ankyrin-like protein; 99.6 9.9E-15 2.2E-19 80.3 7.7 68 3-71 72-142 (471)
39 PHA03100 ankyrin repeat protei 99.6 1.5E-14 3.1E-19 79.8 7.7 69 3-72 130-200 (480)
40 PLN03192 Voltage-dependent pot 99.6 2.9E-14 6.3E-19 83.0 7.9 70 2-72 579-679 (823)
41 PHA02859 ankyrin repeat protei 99.6 4.8E-14 1E-18 71.1 7.8 70 2-72 74-149 (209)
42 PHA02875 ankyrin repeat protei 99.6 3.9E-14 8.4E-19 77.1 7.9 69 2-71 23-91 (413)
43 KOG0195|consensus 99.6 1.4E-14 3.1E-19 75.6 5.9 66 5-71 25-90 (448)
44 PHA02946 ankyin-like protein; 99.6 3.7E-14 7.9E-19 78.1 7.8 69 2-72 196-267 (446)
45 PHA02876 ankyrin repeat protei 99.6 3.6E-14 7.8E-19 81.2 8.0 69 2-71 166-234 (682)
46 PHA02989 ankyrin repeat protei 99.6 5.1E-14 1.1E-18 78.2 7.7 70 2-72 96-171 (494)
47 KOG0510|consensus 99.5 5.7E-14 1.2E-18 80.5 7.1 61 8-69 267-327 (929)
48 PHA02917 ankyrin-like protein; 99.5 1.1E-13 2.3E-18 79.2 8.0 70 2-72 440-510 (661)
49 PHA02716 CPXV016; CPX019; EVM0 99.5 9E-14 2E-18 80.1 7.4 69 3-72 164-238 (764)
50 KOG4177|consensus 99.5 5E-14 1.1E-18 83.3 6.5 71 2-73 561-631 (1143)
51 PHA02730 ankyrin-like protein; 99.5 1.2E-13 2.6E-18 78.6 7.5 70 2-72 450-522 (672)
52 KOG0514|consensus 99.5 6.8E-14 1.5E-18 74.6 5.6 68 6-74 331-399 (452)
53 KOG0195|consensus 99.5 4.7E-14 1E-18 73.7 4.7 70 2-72 55-124 (448)
54 PHA02736 Viral ankyrin protein 99.5 6.4E-14 1.4E-18 67.7 4.0 62 9-71 50-115 (154)
55 KOG0510|consensus 99.5 1.2E-13 2.5E-18 79.3 5.4 73 2-74 294-367 (929)
56 PHA02876 ankyrin repeat protei 99.5 5.8E-13 1.3E-17 76.4 7.9 67 4-71 331-398 (682)
57 KOG0502|consensus 99.5 2.2E-13 4.8E-18 68.7 5.3 63 5-68 151-213 (296)
58 PHA02884 ankyrin repeat protei 99.4 9E-13 1.9E-17 69.5 7.1 64 2-66 91-155 (300)
59 COG0666 Arp FOG: Ankyrin repea 99.4 1.6E-12 3.5E-17 65.2 7.8 69 3-72 95-171 (235)
60 KOG0514|consensus 99.4 2.3E-13 5E-18 72.6 4.9 69 2-70 361-429 (452)
61 KOG0508|consensus 99.4 9.4E-14 2E-18 76.1 3.3 70 2-72 105-174 (615)
62 PHA02792 ankyrin-like protein; 99.4 9.4E-13 2E-17 74.6 6.4 53 3-56 399-451 (631)
63 KOG0502|consensus 99.4 1.5E-13 3.3E-18 69.3 2.4 69 3-72 182-250 (296)
64 KOG0506|consensus 99.4 2.6E-13 5.7E-18 74.4 3.4 69 3-71 528-596 (622)
65 PHA02917 ankyrin-like protein; 99.4 4.6E-12 9.9E-17 72.7 8.1 69 3-72 385-476 (661)
66 KOG0505|consensus 99.4 8.6E-13 1.9E-17 72.7 5.0 71 2-73 61-131 (527)
67 PHA02792 ankyrin-like protein; 99.4 3.4E-12 7.4E-17 72.4 6.5 70 2-72 360-434 (631)
68 PHA02795 ankyrin-like protein; 99.3 6.2E-12 1.3E-16 69.0 6.6 58 14-72 188-245 (437)
69 PF12796 Ank_2: Ankyrin repeat 99.3 2.2E-11 4.7E-16 54.0 7.0 50 18-72 1-50 (89)
70 cd00204 ANK ankyrin repeats; 99.3 5.8E-11 1.2E-15 54.8 7.7 66 5-71 31-96 (126)
71 KOG0512|consensus 99.3 9.2E-12 2E-16 61.0 5.0 70 2-72 118-188 (228)
72 cd00204 ANK ankyrin repeats; 99.3 8.6E-11 1.9E-15 54.2 8.0 62 9-71 2-63 (126)
73 KOG1710|consensus 99.3 5E-11 1.1E-15 62.5 6.6 66 6-72 37-103 (396)
74 PF13857 Ank_5: Ankyrin repeat 99.2 1.6E-11 3.4E-16 50.3 3.4 36 36-71 3-39 (56)
75 KOG0818|consensus 99.2 5.2E-11 1.1E-15 66.0 6.0 67 2-69 154-221 (669)
76 KOG0705|consensus 99.2 8.1E-11 1.8E-15 66.2 6.5 68 6-74 653-720 (749)
77 TIGR00870 trp transient-recept 99.2 1.4E-10 3E-15 67.4 7.5 60 12-72 126-199 (743)
78 PF13606 Ank_3: Ankyrin repeat 99.2 6E-11 1.3E-15 42.8 3.6 26 47-72 1-26 (30)
79 KOG0505|consensus 99.2 5.5E-11 1.2E-15 65.9 5.0 68 4-72 188-255 (527)
80 KOG0507|consensus 99.2 1.2E-11 2.6E-16 70.9 2.3 59 9-68 110-168 (854)
81 PF00023 Ank: Ankyrin repeat H 99.2 1.3E-10 2.9E-15 42.7 4.3 32 13-45 1-32 (33)
82 PF13606 Ank_3: Ankyrin repeat 99.2 1E-10 2.2E-15 42.2 3.7 29 13-42 1-29 (30)
83 COG0666 Arp FOG: Ankyrin repea 99.1 3.5E-10 7.6E-15 56.7 5.5 65 6-71 139-203 (235)
84 PTZ00322 6-phosphofructo-2-kin 99.1 7E-10 1.5E-14 64.0 7.1 56 16-72 84-139 (664)
85 PF00023 Ank: Ankyrin repeat H 99.1 2.6E-10 5.5E-15 41.9 3.5 26 47-72 1-26 (33)
86 KOG0783|consensus 99.1 5.7E-11 1.2E-15 69.2 2.4 65 7-72 45-110 (1267)
87 KOG3676|consensus 99.1 3.8E-10 8.3E-15 65.1 5.7 68 2-70 261-330 (782)
88 TIGR00870 trp transient-recept 99.1 1.2E-09 2.5E-14 63.7 7.6 68 4-72 42-152 (743)
89 KOG4214|consensus 99.1 3E-10 6.5E-15 50.7 3.8 54 2-56 55-108 (117)
90 KOG0522|consensus 99.1 1.2E-09 2.7E-14 60.8 6.8 64 5-69 46-109 (560)
91 KOG0507|consensus 99.1 4.4E-10 9.5E-15 64.8 5.0 71 2-73 70-140 (854)
92 KOG2384|consensus 99.0 3.1E-09 6.6E-14 52.9 5.8 66 4-70 2-68 (223)
93 KOG1710|consensus 99.0 2.1E-09 4.5E-14 56.6 5.3 66 2-68 66-132 (396)
94 KOG0515|consensus 99.0 1.1E-09 2.3E-14 61.5 4.2 67 2-69 604-673 (752)
95 KOG0511|consensus 98.9 5.4E-09 1.2E-13 56.8 6.1 58 15-73 37-94 (516)
96 PF13637 Ank_4: Ankyrin repeat 98.9 1.2E-09 2.5E-14 44.4 2.7 33 2-34 22-54 (54)
97 KOG3676|consensus 98.9 7.8E-09 1.7E-13 60.0 5.9 62 11-73 237-298 (782)
98 KOG4369|consensus 98.5 2.9E-08 6.3E-13 60.3 1.2 70 2-72 778-848 (2131)
99 KOG0506|consensus 98.5 8.5E-08 1.8E-12 53.5 2.8 61 13-74 505-565 (622)
100 KOG0783|consensus 98.5 3.7E-07 8E-12 54.2 4.5 55 2-57 73-128 (1267)
101 KOG0521|consensus 98.4 4.4E-07 9.5E-12 53.6 2.9 62 11-73 653-714 (785)
102 KOG0818|consensus 98.2 9.6E-06 2.1E-10 46.0 5.6 57 16-73 135-192 (669)
103 KOG0511|consensus 98.1 1.1E-05 2.4E-10 44.5 5.2 55 2-58 57-111 (516)
104 KOG0782|consensus 98.1 7.6E-06 1.7E-10 47.2 4.1 63 9-72 894-958 (1004)
105 KOG0782|consensus 98.0 1.3E-05 2.7E-10 46.4 4.3 63 8-71 928-990 (1004)
106 KOG4369|consensus 98.0 8.3E-06 1.8E-10 50.4 3.4 57 13-70 756-812 (2131)
107 smart00248 ANK ankyrin repeats 98.0 3.1E-05 6.6E-10 26.2 3.6 25 48-72 2-26 (30)
108 KOG0520|consensus 97.9 2.9E-05 6.2E-10 47.0 4.5 65 4-69 631-701 (975)
109 KOG0521|consensus 97.9 1.4E-05 3E-10 47.6 2.8 65 2-67 677-741 (785)
110 KOG3609|consensus 97.8 5E-05 1.1E-09 45.2 4.2 68 4-72 52-155 (822)
111 smart00248 ANK ankyrin repeats 97.8 0.00011 2.4E-09 24.7 3.8 28 13-41 1-28 (30)
112 KOG0520|consensus 97.8 7.7E-06 1.7E-10 49.3 0.9 36 37-72 630-665 (975)
113 KOG2505|consensus 97.8 8.6E-05 1.9E-09 42.3 4.6 45 11-56 427-471 (591)
114 KOG0522|consensus 97.8 8.9E-05 1.9E-09 42.3 4.5 57 16-72 22-79 (560)
115 KOG2384|consensus 97.1 0.00082 1.8E-08 34.2 3.1 37 38-74 2-38 (223)
116 KOG0705|consensus 96.7 0.0036 7.7E-08 36.8 3.5 37 3-40 683-719 (749)
117 PF06128 Shigella_OspC: Shigel 96.0 0.054 1.2E-06 28.7 5.2 49 26-74 229-280 (284)
118 KOG2505|consensus 94.5 0.14 3.1E-06 30.0 4.4 44 27-71 404-453 (591)
119 KOG3609|consensus 93.4 0.14 3E-06 31.7 3.1 58 14-71 25-85 (822)
120 PF11929 DUF3447: Domain of un 92.8 0.39 8.5E-06 20.7 5.3 52 15-74 7-58 (76)
121 KOG1709|consensus 90.7 0.35 7.5E-06 25.7 2.4 38 2-40 3-40 (271)
122 PF03158 DUF249: Multigene fam 88.2 2.4 5.1E-05 22.0 4.8 45 18-69 147-191 (192)
123 KOG1709|consensus 71.2 11 0.00024 20.4 3.3 38 36-73 3-40 (271)
124 KOG3836|consensus 69.6 2 4.3E-05 26.1 0.5 32 3-34 418-449 (605)
125 COG2169 Ada Adenosine deaminas 43.6 45 0.00097 17.5 2.6 28 44-72 119-146 (187)
126 cd04440 DEP_2_P-Rex DEP (Dishe 41.3 32 0.00069 15.8 1.7 13 61-73 41-53 (93)
127 PF09722 DUF2384: Protein of u 38.1 32 0.0007 13.5 1.9 22 46-67 25-47 (54)
128 cd04439 DEP_1_P-Rex DEP (Dishe 34.1 48 0.001 14.7 1.7 13 61-73 32-44 (81)
129 COG1732 OpuBC Periplasmic glyc 33.7 79 0.0017 18.1 2.8 36 28-63 50-86 (300)
130 cd04441 DEP_2_DEP6 DEP (Dishev 33.5 50 0.0011 14.9 1.7 13 60-72 35-47 (85)
131 PF13010 pRN1_helical: Primase 31.3 20 0.00044 17.4 0.3 19 57-75 78-96 (135)
132 COG4003 Uncharacterized protei 26.6 78 0.0017 14.4 1.8 25 50-74 36-64 (98)
133 COG5064 SRP1 Karyopherin (impo 24.9 60 0.0013 19.2 1.5 15 60-74 403-417 (526)
134 cd04443 DEP_GPR155 DEP (Dishev 23.7 87 0.0019 14.0 1.8 12 61-72 34-45 (83)
135 cd01397 HAT_MBD Methyl-CpG bin 23.7 84 0.0018 13.8 1.8 16 60-75 40-55 (73)
136 PF04964 Flp_Fap: Flp/Fap pili 23.3 66 0.0014 12.5 1.2 14 43-56 2-15 (46)
137 cd04448 DEP_PIKfyve DEP (Dishe 22.0 94 0.002 13.7 1.7 12 61-72 32-43 (81)
138 cd04442 DEP_1_DEP6 DEP (Dishev 21.2 1E+02 0.0022 13.8 1.7 12 61-72 32-43 (82)
139 PF12645 HTH_16: Helix-turn-he 20.4 93 0.002 13.1 2.4 14 20-33 5-18 (65)
No 1
>KOG4412|consensus
Probab=99.81 E-value=1.2e-19 Score=88.46 Aligned_cols=69 Identities=26% Similarity=0.354 Sum_probs=56.3
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++.+|.+|+.||||||+|+..|+.++++.|+.+.+++++...+.|+|+||+|+..|.++++.+|+.+|+
T Consensus 62 nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga 130 (226)
T KOG4412|consen 62 NVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGA 130 (226)
T ss_pred CCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCC
Confidence 456777788888888888888888888888755588888888888888888888888888888888774
No 2
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.79 E-value=1.8e-18 Score=70.61 Aligned_cols=54 Identities=35% Similarity=0.638 Sum_probs=45.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 14 DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68 (76)
Q Consensus 14 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 68 (76)
|.|++|+|+..|+.+++++++ +.+.+++.+|..|.||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll-~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLL-EHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHH-HTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 679999999999999999998 789999999999999999999999999999986
No 3
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.77 E-value=9.4e-19 Score=71.93 Aligned_cols=53 Identities=34% Similarity=0.500 Sum_probs=33.3
Q ss_pred ccc-cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy14142 2 TYE-MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAA 55 (76)
Q Consensus 2 ~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a 55 (76)
..+ .+++.+|..|.||||+|+..|+.+++++|+ ..+++++.++..|.||+|+|
T Consensus 3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLL-QNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ---T--TT---TTS--HHHHHHHHT-HHHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence 455 889999999999999999999999999999 99999999999999999986
No 4
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.75 E-value=1.5e-17 Score=73.86 Aligned_cols=58 Identities=33% Similarity=0.501 Sum_probs=54.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 14 DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 14 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|.+|+|+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 83 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLL-ENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGA 83 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHH-HTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 789999999999999999998 9999999999999999999999999999999999864
No 5
>KOG4412|consensus
Probab=99.74 E-value=1e-17 Score=81.78 Aligned_cols=68 Identities=28% Similarity=0.490 Sum_probs=59.3
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|+++|.....|.|+||||+..+..++.++|+ +.|+.++.+|..|+||||-|+.-|..+++++|+..++
T Consensus 96 ~advna~tn~G~T~LHyAagK~r~eIaqlLl-e~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a 163 (226)
T KOG4412|consen 96 GADVNATTNGGQTCLHYAAGKGRLEIAQLLL-EKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA 163 (226)
T ss_pred CCCcceecCCCcceehhhhcCChhhHHHHHH-hcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence 7888888888889999998888888888888 8888888888888899998888888888888888774
No 6
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.73 E-value=4.6e-17 Score=78.59 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=64.1
Q ss_pred ccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++.++ ..|.||||+|+..++.+++++|+...+++++.++..|.||||+|+..++.+++++|+.+++
T Consensus 79 ~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 79 EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4688999998 4899999999999999999999833589999999999999999999999999999999875
No 7
>PHA02795 ankyrin-like protein; Provisional
Probab=99.73 E-value=4.2e-17 Score=88.75 Aligned_cols=70 Identities=21% Similarity=0.343 Sum_probs=65.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC--------HHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC--------LSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~--------~~~~~~l~~~~~ 72 (76)
++|+++|.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..|+ .+++++|++.++
T Consensus 209 s~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL-~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga 286 (437)
T PHA02795 209 PYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLL-ENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL 286 (437)
T ss_pred hCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence 579999999999999999999999999999998 9999999999999999999999884 689999998765
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.72 E-value=9.8e-17 Score=78.39 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=40.9
Q ss_pred cccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|+++|.++ ..|.||||+|+..++.+++++|+...+++++.++..|.||||+|...++.+++++|++++
T Consensus 82 ~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g 151 (166)
T PHA02743 82 MGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANG 151 (166)
T ss_pred cCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 455555555 356666666666666666666552245566666666666666666666666666666554
No 9
>KOG4214|consensus
Probab=99.71 E-value=5.5e-17 Score=71.75 Aligned_cols=68 Identities=28% Similarity=0.453 Sum_probs=61.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
|.|+|.. ..|++|+|+|+..|-.+++++++ .-|++++.+|..|.|||..|.+.||.++|++|+++|+.
T Consensus 25 g~nVn~~-~ggR~plhyAAD~GQl~ilefli-~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAd 92 (117)
T KOG4214|consen 25 GLNVNEI-YGGRTPLHYAADYGQLSILEFLI-SIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGAD 92 (117)
T ss_pred cccHHHH-hCCcccchHhhhcchHHHHHHHH-HhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcc
Confidence 3444433 37899999999999999999998 99999999999999999999999999999999999875
No 10
>PHA02946 ankyin-like protein; Provisional
Probab=99.70 E-value=1.6e-16 Score=87.20 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=64.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMG--CLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~--~~~~~~~l~~~~~ 72 (76)
++|+++|.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..+ ..+++++|+++|+
T Consensus 60 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL-~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Ga 131 (446)
T PHA02946 60 HRGYSPNETDDDGNYPLHIASKINNNRIVAMLL-THGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131 (446)
T ss_pred HCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 578999999999999999999999999999998 899999999999999999998765 4788999998875
No 11
>KOG0509|consensus
Probab=99.70 E-value=7.6e-17 Score=89.48 Aligned_cols=68 Identities=26% Similarity=0.344 Sum_probs=38.3
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|.+++..|.+|.++||||+.++..+++++|+ +.|++++..+ .-+.||||+|+++|+..++.+|+++|+
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li-~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGA 136 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLI-SHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGA 136 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHH-HcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCC
Confidence 4445555555555555555555555555555 5555555554 335555555555555555555555553
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.70 E-value=3.6e-16 Score=76.56 Aligned_cols=66 Identities=20% Similarity=0.327 Sum_probs=53.9
Q ss_pred ccCcccCCCCCCcHHHHHHHcCC----HHHHHHHHHhcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGH----LEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~-~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
|++++.++..|.||||+|+..++ .+++++|+ ..|++++.++. .|.||||+|+..++.+++++|+..
T Consensus 50 ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll-~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~ 120 (169)
T PHA02741 50 AAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLI-ELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQ 120 (169)
T ss_pred hhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHH-HcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 56778888888888888888887 46778887 77888888774 788888888888888888888864
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.70 E-value=2.4e-16 Score=85.60 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=56.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..++.++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 123 ~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga 192 (413)
T PHA02875 123 ARGADPDIPNTDKFSPLHLAVMMGDIKGIELLI-DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA 192 (413)
T ss_pred hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 457778888888888888888888888888887 7788888888888888888888888888888887764
No 14
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.4e-16 Score=87.33 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=64.6
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.++++|.+|..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.++++.|++.+.
T Consensus 245 ~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL-~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 245 KYIKINKKDKKGFNPLLISAKVDNYEAFNYLL-KLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 46789999999999999999999999999998 9999999999999999999999999999999988653
No 15
>KOG0509|consensus
Probab=99.68 E-value=1.4e-16 Score=88.40 Aligned_cols=70 Identities=26% Similarity=0.457 Sum_probs=63.3
Q ss_pred CccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 1 MTYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 1 ~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+++|+++|... .-+.||||||+++|+..++.+|+ +.|++++.+|.+|.+|+|+|++.++..++.+|+.++
T Consensus 98 i~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLl-qhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~ 168 (600)
T KOG0509|consen 98 ISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLL-QHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG 168 (600)
T ss_pred HHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHH-HcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc
Confidence 36789999887 56789999999999999999998 999999999999999999999999999999988876
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.3e-16 Score=85.99 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=46.4
Q ss_pred cccCcccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDN-DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|++++..+.. |.||||+|+..++.+++++|+ ..|++++..+..|.||||.|+..++.+++++|++.|
T Consensus 156 ~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll-~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 224 (477)
T PHA02878 156 YGADINMKDRHKGNTALHYATENKDQRLTELLL-SYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG 224 (477)
T ss_pred cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 46666666666 677777777777777777666 666666666666777777777666777777666655
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=99.68 E-value=4.7e-16 Score=85.44 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=55.3
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|+++|.++..|.||||+|+..|+.+++++|+ ..|++++.++..|.||+|+|+..++.+++++|++.++
T Consensus 246 ~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL-~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~ 314 (471)
T PHA03095 246 AGISINARNRYGQTPLHYAAVFNNPRACRRLI-ALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNP 314 (471)
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCC
Confidence 56777888888888888888888888888887 7788888888888888888888888888888777653
No 18
>PHA02791 ankyrin-like protein; Provisional
Probab=99.67 E-value=7.1e-16 Score=80.64 Aligned_cols=67 Identities=19% Similarity=0.289 Sum_probs=41.8
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCC-CcHHHHHHHcCCHHHHHHHHhC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDG-MAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g-~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.|++++.++..|.||||+|+..++.+++++|+ ..|++++.++..| .||||+|+..++.+++++|++.
T Consensus 83 ~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll-~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~ 150 (284)
T PHA02791 83 SGMDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 150 (284)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc
Confidence 45666666666667777777666666666666 6666655555444 3566666666666666666554
No 19
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.67 E-value=6e-16 Score=75.63 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=58.5
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHH---HHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLE---VLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~---~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
.+.+++.++..|+||||+|+..+..+ ++++|+ ..|++++.++ ..|.||||+|+..++.+++++|+.
T Consensus 46 ~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll-~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 46 DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLV-NMGADINARELGTGNTLLHIAASTKNYELAEWLCR 115 (166)
T ss_pred cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHH-HcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 46677888999999999999998765 478887 8999999998 589999999999999999999995
No 20
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.67 E-value=9.6e-16 Score=80.53 Aligned_cols=70 Identities=19% Similarity=0.361 Sum_probs=63.0
Q ss_pred ccccCcccCC----CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQM----DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~----~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|+++|..+ ..|.||||+|+..++.+++++|+ ..|++++.++ ..|.||||.|+..++.+++++|++.|+
T Consensus 54 ~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL-~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GA 128 (300)
T PHA02884 54 KLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLI-RYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGA 128 (300)
T ss_pred HCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 5789998874 58999999999999999999998 8999999864 579999999999999999999999875
No 21
>KOG0512|consensus
Probab=99.67 E-value=3.1e-16 Score=76.35 Aligned_cols=65 Identities=23% Similarity=0.430 Sum_probs=62.2
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 7 ~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|.+|.++.||||-|+.+++.+++..|+ ..|++++.+...|.||||.|+..++.+++.+|+++|+
T Consensus 90 vNtrD~D~YTpLHRAaYn~h~div~~ll-~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhga 154 (228)
T KOG0512|consen 90 VNTRDEDEYTPLHRAAYNGHLDIVHELL-LSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGA 154 (228)
T ss_pred ccccccccccHHHHHHhcCchHHHHHHH-HccCCcccccccCccchhhhhcccchhHHHHHHhccC
Confidence 7889999999999999999999999998 9999999999999999999999999999999999875
No 22
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.66 E-value=7.5e-16 Score=89.38 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=64.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|+++|..|..|.||||+|+..|+.++++.|+ ..|++++.++..|.||||+|+..|+.+++++|++.++
T Consensus 546 ~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll-~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~ 615 (823)
T PLN03192 546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLL-KHACNVHIRDANGNTALWNAISAKHHKIFRILYHFAS 615 (823)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-hcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCc
Confidence 468999999999999999999999999999998 8999999999999999999999999999998887654
No 23
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.66 E-value=1e-15 Score=84.32 Aligned_cols=70 Identities=21% Similarity=0.287 Sum_probs=66.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||+++|...++.+++++|+++|+
T Consensus 238 ~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll-~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~ 307 (480)
T PHA03100 238 SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLL-DLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP 307 (480)
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence 468899999999999999999999999999998 9999999999999999999999999999999999876
No 24
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.66 E-value=1.1e-15 Score=87.12 Aligned_cols=69 Identities=25% Similarity=0.406 Sum_probs=65.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
..|+++|.+|..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++++
T Consensus 103 ~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL-~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 171 (664)
T PTZ00322 103 TGGADPNCRDYDGRTPLHIACANGHVQVVRVLL-EFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHS 171 (664)
T ss_pred HCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCC
Confidence 468899999999999999999999999999998 899999999999999999999999999999999883
No 25
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.5e-15 Score=83.07 Aligned_cols=67 Identities=24% Similarity=0.354 Sum_probs=32.6
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll-~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 180 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLF-EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHH-hCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence 4444444444555555555555555554444 444444444444445555544444444444444443
No 26
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.5e-15 Score=83.04 Aligned_cols=70 Identities=27% Similarity=0.544 Sum_probs=66.2
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|+ ..|+.++..+..|.||||+|+..|+.+++++|++.++
T Consensus 145 ~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll-~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~ 214 (434)
T PHA02874 145 EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL-EKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214 (434)
T ss_pred hCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 468899999999999999999999999999998 8999999999999999999999999999999999875
No 27
>PHA02741 hypothetical protein; Provisional
Probab=99.65 E-value=1.2e-15 Score=74.74 Aligned_cols=71 Identities=18% Similarity=0.183 Sum_probs=63.5
Q ss_pred ccccCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMD-NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+++|.++. .|.||||+|+..++.+++++|+...+++++.++..|.||||+|...++.+++++|+++++
T Consensus 85 ~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 85 ELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred HcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 35889999885 899999999999999999999833689999999999999999999999999999988654
No 28
>PHA02791 ankyrin-like protein; Provisional
Probab=99.64 E-value=2.6e-15 Score=78.55 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=54.6
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|++++.. .+.||||+|+..++.++++.|+ ..|++++.++..|.||||+|+..|+.+++++|++.++
T Consensus 52 ~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL-~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga 118 (284)
T PHA02791 52 AGALKNLL--ENEFPLHQAATLEDTKIVKILL-FSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW 118 (284)
T ss_pred CcCCCcCC--CCCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45566554 3578888888888888888887 7888888888889999999999999999998888764
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.64 E-value=2e-15 Score=83.60 Aligned_cols=70 Identities=23% Similarity=0.393 Sum_probs=58.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEG---HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC---LSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~---~~~~~~l~~~~~ 72 (76)
.+|+++|.++..|.||||+|+..+ +.+++++|+ ..|++++.++..|.||||+|...++ .+++++|++.|+
T Consensus 97 ~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ga 172 (489)
T PHA02798 97 ENGADINKKNSDGETPLYCLLSNGYINNLEILLFMI-ENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGV 172 (489)
T ss_pred HCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCC
Confidence 468888888888999999888875 578888887 8888888888889999999888877 888888888763
No 30
>PHA02798 ankyrin-like protein; Provisional
Probab=99.64 E-value=2.6e-15 Score=83.20 Aligned_cols=68 Identities=12% Similarity=0.253 Sum_probs=64.0
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++++|.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.++++.|++.+.
T Consensus 248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL-~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~ 315 (489)
T PHA02798 248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLL-QLGGDINIITELGNTCLFTAFENESKFIFNSILNKKP 315 (489)
T ss_pred cCCCCCcCcCCccHHHHHHHcCcHHHHHHHH-HcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCC
Confidence 5789999999999999999999999999998 9999999999999999999999999999999988753
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.64 E-value=2.7e-15 Score=82.86 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=63.6
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHc-CCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQM-GCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~-~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.++++.|+ ..|++++.++..|.||||+|+.. ++.+++++|+++|+
T Consensus 189 ~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll-~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~ga 259 (477)
T PHA02878 189 SYGANVNIPDKTNNSPLHHAVKHYNKPIVHILL-ENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGV 259 (477)
T ss_pred HCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCC
Confidence 468899999999999999999999999999998 89999999999999999999965 68999999998874
No 32
>PHA02730 ankyrin-like protein; Provisional
Probab=99.63 E-value=2.4e-15 Score=85.32 Aligned_cols=66 Identities=8% Similarity=0.149 Sum_probs=59.5
Q ss_pred Ccc-cCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCC
Q psy14142 6 SAN-SQMDNDVTPVYLAAQEG---HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMG--CLSCLKWMEHRPA 72 (76)
Q Consensus 6 ~~~-~~~~~~~t~l~~a~~~~---~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~--~~~~~~~l~~~~~ 72 (76)
++| .+|..|.||||+|+..+ +.+++++|+ ..|++++.+|..|.||||+|+..+ +.+++++|++.|+
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLL-s~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~ 103 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLL-SRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYS 103 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHH-hCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCC
Confidence 566 67888999999999987 589999999 999999999999999999999876 7999999999864
No 33
>KOG4177|consensus
Probab=99.63 E-value=1.1e-15 Score=90.01 Aligned_cols=70 Identities=26% Similarity=0.412 Sum_probs=61.4
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.|++++..+..+.||||.|+..|+.+++++|+ +.|++.+.++..|.||||.|+..|+.+++.+|+++|+.
T Consensus 529 ~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLL-e~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 529 HGANVDLRTGRGYTPLHVAVHYGNVDLVKFLL-EHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred cCCceehhcccccchHHHHHhcCCchHHHHhh-hCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC
Confidence 57788888888889999999999999999998 88999999888899999999999999999999988753
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.63 E-value=5.1e-15 Score=74.64 Aligned_cols=68 Identities=10% Similarity=0.093 Sum_probs=40.7
Q ss_pred cccCcccCCCCCCcHHHHHHH--cCCHHHHHHHHHhcCCCccccCCCCCcHHHH-HHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQ--EGHLEVLKFLVLEAGGSLYVRAKDGMAPIHA-AAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~--~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~-a~~~~~~~~~~~l~~~~ 71 (76)
+|+++|.++..|.||||+++. .++.+++++|+ ..|++++.++..|.||+|. +...++.+++++|++.|
T Consensus 112 ~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li-~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~G 182 (209)
T PHA02859 112 SGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLI-DSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLG 182 (209)
T ss_pred CCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHH-HcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcC
Confidence 456666666666666666544 24556666665 6666666666666666663 34455666666666654
No 35
>KOG0508|consensus
Probab=99.62 E-value=3.3e-16 Score=85.42 Aligned_cols=70 Identities=17% Similarity=0.351 Sum_probs=65.1
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+|++..+..|.|.|++||..|+.+++++|+ +.|++++.++..|.|+||.++..|+.+++++|+++++
T Consensus 138 E~gad~~IanrhGhTcLmIa~ykGh~~I~qyLl-e~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga 207 (615)
T KOG0508|consen 138 EHGADPEIANRHGHTCLMIACYKGHVDIAQYLL-EQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGA 207 (615)
T ss_pred HcCCCCcccccCCCeeEEeeeccCchHHHHHHH-HhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCc
Confidence 468999999999999999999999999999998 9999999999999999999999999999999999875
No 36
>KOG0515|consensus
Probab=99.60 E-value=3.6e-15 Score=82.40 Aligned_cols=67 Identities=28% Similarity=0.434 Sum_probs=62.8
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 6 ~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
|+...+++|.|+||.|.+.||.+++++|+ ++|++++..|.+|+||||-|+..++..+.+.|++.|+.
T Consensus 575 DpSqpNdEGITaLHNAiCaghyeIVkFLi-~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaa 641 (752)
T KOG0515|consen 575 DPSQPNDEGITALHNAICAGHYEIVKFLI-EFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAA 641 (752)
T ss_pred CCCCCCccchhHHhhhhhcchhHHHHHHH-hcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccce
Confidence 46666889999999999999999999998 99999999999999999999999999999999998864
No 37
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.60 E-value=3.7e-15 Score=85.63 Aligned_cols=68 Identities=12% Similarity=0.196 Sum_probs=60.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCH-----HHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCH-----HHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHL-----EVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCL-----SCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~-----~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~-----~~~~~l~~~~~ 72 (76)
++++|..+..|+||||+|+..++. +.+++|+ ..|++++.++..|.||||+|++.|+. ++++.|+++++
T Consensus 487 ~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL-~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga 564 (764)
T PHA02716 487 RYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLL-SIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRP 564 (764)
T ss_pred hccccccCCCCCCHHHHHHHcCCccchhHHHHHHHH-hCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCC
Confidence 456788899999999999999876 4459998 99999999999999999999999976 99999998774
No 38
>PHA03095 ankyrin-like protein; Provisional
Probab=99.60 E-value=9.9e-15 Score=80.29 Aligned_cols=68 Identities=21% Similarity=0.290 Sum_probs=35.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcC-CHHHHHHHHHhcCCCccccCCCCCcHHHHHH--HcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEG-HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA--QMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~--~~~~~~~~~~l~~~~ 71 (76)
.|+++|.++..|.||||+|+..+ ..+++++|+ +.|++++.++..|.||||+|+ ..++.+++++|++.|
T Consensus 72 ~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl-~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~g 142 (471)
T PHA03095 72 AGADVNAPERCGFTPLHLYLYNATTLDVIKLLI-KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG 142 (471)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcC
Confidence 34555555555555555555555 355555554 555555555555555555555 233445555555544
No 39
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.59 E-value=1.5e-14 Score=79.84 Aligned_cols=69 Identities=20% Similarity=0.390 Sum_probs=45.6
Q ss_pred cccCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEG--HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.+|||+|+..+ +.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 130 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll-~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga 200 (480)
T PHA03100 130 NGANVNIKNSDGENLLHLYLESNKIDLKILKLLI-DKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGA 200 (480)
T ss_pred cCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHH-HCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 45666666666666666666666 666666666 6666666666666666666666666666666666553
No 40
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.57 E-value=2.9e-14 Score=82.97 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=58.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHH-------------------------------HHHHHHHhcCCCccccCCCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLE-------------------------------VLKFLVLEAGGSLYVRAKDGMA 50 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~-------------------------------~~~~l~~~~~~~~~~~~~~g~t 50 (76)
.+|+++|.+|..|.||||+|+..++.+ +++.|+ ..|++++.+|..|.|
T Consensus 579 ~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll-~~Gadin~~d~~G~T 657 (823)
T PLN03192 579 KHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELL-KQGLNVDSEDHQGAT 657 (823)
T ss_pred hcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHH-HCCCCCCCCCCCCCC
Confidence 468899999999999988766655554 455565 678899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCC
Q psy14142 51 PIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 51 pl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|||+|+..|+.+++++|+++|+
T Consensus 658 pLh~A~~~g~~~iv~~Ll~~GA 679 (823)
T PLN03192 658 ALQVAMAEDHVDMVRLLIMNGA 679 (823)
T ss_pred HHHHHHHCCcHHHHHHHHHcCC
Confidence 9999999999999999999875
No 41
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.57 E-value=4.8e-14 Score=71.15 Aligned_cols=70 Identities=19% Similarity=0.215 Sum_probs=57.2
Q ss_pred ccccCcccCC-CCCCcHHHHHHHc---CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQE---GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQ--MGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~~~~l~~~~~ 72 (76)
..|++++.++ ..|.||||+++.. ++.+++++|+ ..|++++.++..|.||||.+.. .++.+++++|++.++
T Consensus 74 ~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll-~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~ga 149 (209)
T PHA02859 74 ENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILI-DSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGV 149 (209)
T ss_pred HCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCC
Confidence 4678888886 4789999987653 4688899888 8899999999999999998765 357899999998773
No 42
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.56 E-value=3.9e-14 Score=77.11 Aligned_cols=69 Identities=19% Similarity=0.255 Sum_probs=50.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
..|++++..+..|.||||+|+..++.+++++|+ ..|+.++.++..+.+|||.|+..|+.+++++|++.+
T Consensus 23 ~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~ 91 (413)
T PHA02875 23 DIGINPNFEIYDGISPIKLAMKFRDSEAIKLLM-KHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLG 91 (413)
T ss_pred HCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcC
Confidence 457788888878888888888888888888887 777776666555666666666666666666666554
No 43
>KOG0195|consensus
Probab=99.56 E-value=1.4e-14 Score=75.57 Aligned_cols=66 Identities=24% Similarity=0.381 Sum_probs=57.7
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
-|.|.-|+.|.+||||+|..|+..+++.|+ ..|+.++..+....||||+|+..||-++|..|++..
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll-~rgarvn~tnmgddtplhlaaahghrdivqkll~~k 90 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLL-SRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRK 90 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHH-hcccccccccCCCCcchhhhhhcccHHHHHHHHHHh
Confidence 467788888999999999999999999998 899999998888899999999999999988777643
No 44
>PHA02946 ankyin-like protein; Provisional
Probab=99.56 E-value=3.7e-14 Score=78.09 Aligned_cols=69 Identities=10% Similarity=0.191 Sum_probs=55.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEG--HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC-LSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~-~~~~~~l~~~~~ 72 (76)
+.|++++.+|..|.||||+|+..+ +.+++++|+ . +++++.++..|.||||+|+..++ .+++++|++.++
T Consensus 196 ~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl-~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~ 267 (446)
T PHA02946 196 KLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL-P-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSN 267 (446)
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHH-c-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCC
Confidence 467888888888899999988875 677888775 4 78888888889999998888877 477788887764
No 45
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.56 E-value=3.6e-14 Score=81.17 Aligned_cols=69 Identities=17% Similarity=0.254 Sum_probs=64.6
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|+++|.++..|.||||+|+..|+.+++++|+ ..|++++..+..|.+|+|.|...++.+++++|++.+
T Consensus 166 ~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL-~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~ 234 (682)
T PHA02876 166 EGGADVNAKDIYCITPIHYAAERGNAKMVNLLL-SYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNR 234 (682)
T ss_pred hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 468999999999999999999999999999998 999999999999999999999999999999988765
No 46
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.55 E-value=5.1e-14 Score=78.21 Aligned_cols=70 Identities=17% Similarity=0.222 Sum_probs=58.6
Q ss_pred ccccCcccCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHc--CCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQE---GHLEVLKFLVLEAGGSL-YVRAKDGMAPIHAAAQM--GCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~-~~~~~~g~tpl~~a~~~--~~~~~~~~l~~~~~ 72 (76)
.+|+++|.++..|.|||+.|+.. ++.+++++|+ +.|+++ +.++..|.||||++... ++.+++++|+++|+
T Consensus 96 ~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll-~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Ga 171 (494)
T PHA02989 96 KFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLL-SKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGV 171 (494)
T ss_pred HCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHH-HCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCC
Confidence 57889999999999999877654 5788999998 889999 78888999999987653 57889999998875
No 47
>KOG0510|consensus
Probab=99.53 E-value=5.7e-14 Score=80.50 Aligned_cols=61 Identities=28% Similarity=0.427 Sum_probs=42.1
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 8 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
|..|.+|+||||+|++.|++++++.|+ ..|++++.++.++.+|||.|+.+|+...++.|++
T Consensus 267 ~~~d~dg~tpLH~a~r~G~~~svd~Ll-~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 267 NDEDNDGCTPLHYAARQGGPESVDNLL-GFGASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred hcccccCCchHHHHHHcCChhHHHHHH-HcCCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 445666777777777777777777666 6777777777667777777777777776666665
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=99.53 E-value=1.1e-13 Score=79.17 Aligned_cols=70 Identities=19% Similarity=0.219 Sum_probs=65.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH-cCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQ-MGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~-~~~~~~~~~l~~~~~ 72 (76)
++|+++|.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|.. .++.+++++|+++++
T Consensus 440 ~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll-~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga 510 (661)
T PHA02917 440 PYLKDINMIDKRGETLLHKAVRYNKQSLVSLLL-ESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKP 510 (661)
T ss_pred HCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCC
Confidence 578999999999999999999999999999998 9999999999999999999996 678999999998874
No 49
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.52 E-value=9e-14 Score=80.13 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=49.3
Q ss_pred cc-cCcccC-CCCCCcHHHHHHHc--CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC--HHHHHHHHhCCC
Q psy14142 3 YE-MSANSQ-MDNDVTPVYLAAQE--GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC--LSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~-~~~~~~-~~~~~t~l~~a~~~--~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~--~~~~~~l~~~~~ 72 (76)
.| +++|.+ +..|.||||+|+.. ++.+++++|+ +.|++++.++..|.||||+|+..|+ .+++++|++.|+
T Consensus 164 ~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLL-e~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GA 238 (764)
T PHA02716 164 VGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLC-NNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGG 238 (764)
T ss_pred CCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCC
Confidence 45 677776 67777788776543 4567777777 7777777777777888888777774 377777777764
No 50
>KOG4177|consensus
Probab=99.52 E-value=5e-14 Score=83.28 Aligned_cols=71 Identities=30% Similarity=0.468 Sum_probs=67.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.+|++++.++..|+||||.||..|+.+++.+|+ +.|+.++..+.+|.|||+.|.+.|+.+++++|+..+..
T Consensus 561 e~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLl-k~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 561 EHGADVNAKDKLGYTPLHQAAQQGHNDIAELLL-KHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred hCCccccccCCCCCChhhHHHHcChHHHHHHHH-HcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 578999999999999999999999999999998 99999999999999999999999999999999887765
No 51
>PHA02730 ankyrin-like protein; Provisional
Probab=99.52 E-value=1.2e-13 Score=78.64 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=64.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCC-CCCcHHHHHHHc--CCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQM--GCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~g~tpl~~a~~~--~~~~~~~~l~~~~~ 72 (76)
++|+++|.+|..|.||||+|+..++.+++++|+ ..|++++.++. .|.||+|.|+.. ++.+++++|+++++
T Consensus 450 s~GADINakD~~G~TPLh~Aa~~~~~eive~LI-~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga 522 (672)
T PHA02730 450 KYMDDIDMIDNENKTLLYYAVDVNNIQFARRLL-EYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHP 522 (672)
T ss_pred hcccchhccCCCCCCHHHHHHHhCCHHHHHHHH-HCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCC
Confidence 578999999999999999999999999999998 99999999996 599999999874 78999999999875
No 52
>KOG0514|consensus
Probab=99.51 E-value=6.8e-14 Score=74.56 Aligned_cols=68 Identities=22% Similarity=0.416 Sum_probs=49.9
Q ss_pred CcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 6 SANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 6 ~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
|+|.+. ..|.|+|++|...|..++++.|+ .+|+++|.+|.+|.|+|+-|+..||.+++++|+.....+
T Consensus 331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LL-acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd 399 (452)
T KOG0514|consen 331 DVNAKASQHGQTALMLAVSHGRVDMVKALL-ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD 399 (452)
T ss_pred CcchhhhhhcchhhhhhhhcCcHHHHHHHH-HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccc
Confidence 455553 35777777777777777777777 777777777777888877777777777777777765444
No 53
>KOG0195|consensus
Probab=99.50 E-value=4.7e-14 Score=73.68 Aligned_cols=70 Identities=24% Similarity=0.259 Sum_probs=65.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+.+|..+...-+|||+|+..||-++++.|+ ...++++..+..|.||||||+..|...+.+-|+..|+
T Consensus 55 ~rgarvn~tnmgddtplhlaaahghrdivqkll-~~kadvnavnehgntplhyacfwgydqiaedli~~ga 124 (448)
T KOG0195|consen 55 SRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL-SRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGA 124 (448)
T ss_pred hcccccccccCCCCcchhhhhhcccHHHHHHHH-HHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccc
Confidence 578999999998999999999999999999998 8899999999999999999999999999999998875
No 54
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.48 E-value=6.4e-14 Score=67.70 Aligned_cols=62 Identities=19% Similarity=0.299 Sum_probs=52.0
Q ss_pred cCCCCCCcHHHHHHHcCCHH---HHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 9 SQMDNDVTPVYLAAQEGHLE---VLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~---~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.++..|.||||+|+..++.+ ++++|+ ..|++++.++ ..|.||||+|+..++.+++++|++..
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll-~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~ 115 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLM-EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQP 115 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHH-HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCC
Confidence 34667888888888888764 567787 8899999988 48999999999999999999999753
No 55
>KOG0510|consensus
Probab=99.48 E-value=1.2e-13 Score=79.28 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=52.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
+.|++++.++.++.+|||.|+..|+.++++.|+...+ ...+..|-.|.||||.|++.||..++++|+..|+..
T Consensus 294 ~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 294 GFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF 367 (929)
T ss_pred HcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh
Confidence 4678888888888888888888888888887773132 344556666777777777777777777777777643
No 56
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.47 E-value=5.8e-13 Score=76.35 Aligned_cols=67 Identities=19% Similarity=0.184 Sum_probs=39.4
Q ss_pred ccCcccCCCCCCcHHHHHHHcC-CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEG-HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..+ ..++++.|+ ..|++++.++..|.||||+|+..++.+++++|++.|
T Consensus 331 gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl-~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g 398 (682)
T PHA02876 331 GADVNAADRLYITPLHQASTLDRNKDIVITLL-ELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG 398 (682)
T ss_pred CCCCCCcccCCCcHHHHHHHhCCcHHHHHHHH-HcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 4455555555555555555432 344555554 566666666666666666666666666666666655
No 57
>KOG0502|consensus
Probab=99.46 E-value=2.2e-13 Score=68.73 Aligned_cols=63 Identities=22% Similarity=0.312 Sum_probs=40.5
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 68 (76)
.-+|..|..|.|||.||+..|++.++++|+ ..|++++.-...-.++|.+|++.|..++|++|+
T Consensus 151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL-~~GAdp~~lgk~resALsLAt~ggytdiV~lLL 213 (296)
T KOG0502|consen 151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLL-NSGADPDALGKYRESALSLATRGGYTDIVELLL 213 (296)
T ss_pred ccccCccccCchHhHHHHhcCchHHHHHHH-HcCCChhhhhhhhhhhHhHHhcCChHHHHHHHH
Confidence 347888889999999999999999988887 776655444333333344444444444444333
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.45 E-value=9e-13 Score=69.52 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=56.2
Q ss_pred ccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKW 66 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~ 66 (76)
++|+++|.++ ..|.||||+|+..++.+++++|+ ..|++++.++..|.||+|+|+..++.+++..
T Consensus 91 ~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL-~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~ 155 (300)
T PHA02884 91 RYGADVNRYAEEAKITPLYISVLHGCLKCLEILL-SYGADINIQTNDMVTPIELALMICNNFLAFM 155 (300)
T ss_pred HcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHhCChhHHHH
Confidence 5789999864 57999999999999999999998 9999999999999999999998776655433
No 59
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.45 E-value=1.6e-12 Score=65.16 Aligned_cols=69 Identities=33% Similarity=0.426 Sum_probs=62.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcCC-----HHHHHHHHHhcCC---CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGH-----LEVLKFLVLEAGG---SLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~l~~~~~~---~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+++++.++..|.|++|+++..++ .++++.++ ..|+ ..+.++..|.||+|+|+..|+.+++++|++.++
T Consensus 95 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~ 171 (235)
T COG0666 95 SGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLL-EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGA 171 (235)
T ss_pred cCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHH-HcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCC
Confidence 477889999999999999999999 99999998 8888 666779999999999999999999999998765
No 60
>KOG0514|consensus
Probab=99.45 E-value=2.3e-13 Score=72.60 Aligned_cols=69 Identities=22% Similarity=0.274 Sum_probs=63.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
..|+|+|.+|.+|.|+|++||..||.++++.|+....++....|.+|.|+|.+|-..|+.++..+|..+
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 458999999999999999999999999999998788999999999999999999999999997776543
No 61
>KOG0508|consensus
Probab=99.44 E-value=9.4e-14 Score=76.12 Aligned_cols=70 Identities=26% Similarity=0.402 Sum_probs=64.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+++|.-.....|||-.||.-|+.+++++|+ +.+++++..++.|.|.|+.|+..|+.+++++|+++|+
T Consensus 105 ~~ga~VN~tT~TNStPLraACfDG~leivKyLv-E~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA 174 (615)
T KOG0508|consen 105 RRGASVNDTTRTNSTPLRAACFDGHLEIVKYLV-EHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA 174 (615)
T ss_pred HhcCccccccccCCccHHHHHhcchhHHHHHHH-HcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCC
Confidence 467888888888889999999999999999998 9999999999999999999999999999999999875
No 62
>PHA02792 ankyrin-like protein; Provisional
Probab=99.42 E-value=9.4e-13 Score=74.63 Aligned_cols=53 Identities=15% Similarity=0.297 Sum_probs=30.3
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA 56 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~ 56 (76)
+|+++|.+|..|.||||+|+..++.+++++|+ ..|++++.++..|.||+++|.
T Consensus 399 ~GADIN~kD~~G~TPLh~Aa~~~n~eivelLL-s~GADIN~kD~~G~TpL~~A~ 451 (631)
T PHA02792 399 YIDDINKIDKHGRSILYYCIESHSVSLVEWLI-DNGADINITTKYGSTCIGICV 451 (631)
T ss_pred cCCccccccccCcchHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHH
Confidence 45555555555555555555555555555555 555555555555555555554
No 63
>KOG0502|consensus
Probab=99.41 E-value=1.5e-13 Score=69.33 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=56.5
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|++++...+...++|.+|++.|+.+++++|+ .++.+++..|+.|-|||-+|.+.++.+|++.|+..|+
T Consensus 182 ~GAdp~~lgk~resALsLAt~ggytdiV~lLL-~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA 250 (296)
T KOG0502|consen 182 SGADPDALGKYRESALSLATRGGYTDIVELLL-TREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA 250 (296)
T ss_pred cCCChhhhhhhhhhhHhHHhcCChHHHHHHHH-hcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCC
Confidence 46777777777778888888888888888887 8888888888888888888888888888888887765
No 64
>KOG0506|consensus
Probab=99.40 E-value=2.6e-13 Score=74.36 Aligned_cols=69 Identities=26% Similarity=0.335 Sum_probs=64.8
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.|+|++.+|.+.+|.||.|+..|+++++++|++....+++.+|+.|+|||..|...+|.+++++|.+..
T Consensus 528 ~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 528 QGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred hcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 478999999999999999999999999999998889999999999999999999999999999998753
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=99.39 E-value=4.6e-12 Score=72.68 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=58.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcC-----------------------CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEG-----------------------HLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMG 59 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~-----------------------~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~ 59 (76)
.|++++.++..|.||||.++..+ ..+++++|+ ..|++++.++..|.||||+|+..+
T Consensus 385 ~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll-~~GAdIN~kd~~G~TpLh~Aa~~~ 463 (661)
T PHA02917 385 EGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICL-PYLKDINMIDKRGETLLHKAVRYN 463 (661)
T ss_pred cCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHH-HCCCCCCCCCCCCcCHHHHHHHcC
Confidence 46777777778999999987433 245678888 899999999999999999999999
Q ss_pred CHHHHHHHHhCCC
Q psy14142 60 CLSCLKWMEHRPA 72 (76)
Q Consensus 60 ~~~~~~~l~~~~~ 72 (76)
+.+++++|++.|+
T Consensus 464 ~~~~v~~Ll~~GA 476 (661)
T PHA02917 464 KQSLVSLLLESGS 476 (661)
T ss_pred CHHHHHHHHHCcC
Confidence 9999999999875
No 66
>KOG0505|consensus
Probab=99.39 E-value=8.6e-13 Score=72.74 Aligned_cols=71 Identities=30% Similarity=0.449 Sum_probs=66.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
..|++++..+.+|.|++|-+|.-.+.+|+++++ ..|+.++..|..+.||+|.|+..++..++.+|+.+|+-
T Consensus 61 ~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~-e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~ 131 (527)
T KOG0505|consen 61 NRGASPNLCNVDGLTALHQACIDDNLEMVKFLV-ENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGAN 131 (527)
T ss_pred ccCCCccccCCccchhHHHHHhcccHHHHHHHH-HhcCCccccccccCCcchhhcccccHHHHHHHHHhhhh
Confidence 356788899999999999999999999999998 99999999999999999999999999999999998763
No 67
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=3.4e-12 Score=72.42 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=60.3
Q ss_pred ccccCcccCCCCC--CcHHHHHHHcCCHH---HHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDND--VTPVYLAAQEGHLE---VLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~--~t~l~~a~~~~~~~---~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++|++++.++..| .+|+|+|+...... ++++++ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 360 s~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI-s~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA 434 (631)
T PHA02792 360 KNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK-PYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGA 434 (631)
T ss_pred HcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH-hcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCC
Confidence 5799999988764 69999877766543 467777 8999999999999999999999999999999999875
No 68
>PHA02795 ankyrin-like protein; Provisional
Probab=99.35 E-value=6.2e-12 Score=69.04 Aligned_cols=58 Identities=17% Similarity=0.232 Sum_probs=49.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 14 DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 14 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.+++|.+...++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 188 ~~t~l~~a~~~~~~eIve~LI-s~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA 245 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCI-PYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGA 245 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHH-hCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 556667777777777888887 7888889999999999999999999999999999885
No 69
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.34 E-value=2.2e-11 Score=53.99 Aligned_cols=50 Identities=40% Similarity=0.622 Sum_probs=45.0
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 18 VYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 18 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
||+|+..++.+++++++ ..+...+. |.+|+|+|+..|+.+++++|++++.
T Consensus 1 L~~A~~~~~~~~~~~ll-~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~ 50 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLL-EKGADINL----GNTALHYAAENGNLEIVKLLLENGA 50 (89)
T ss_dssp HHHHHHTTTHHHHHHHH-HTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTT
T ss_pred CHHHHHcCCHHHHHHHH-HCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 68999999999999998 67766655 8899999999999999999999874
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.30 E-value=5.8e-11 Score=54.81 Aligned_cols=66 Identities=38% Similarity=0.626 Sum_probs=42.0
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+.+..+..|.+++++++..+..++++.++ ..+...+..+..+.+|+|+|...++.+++++|++.+
T Consensus 31 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 31 ADVNAKDNDGRTPLHLAAKNGHLEIVKLLL-EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96 (126)
T ss_pred CCCCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 333455566666666666666666666665 555555555666667777777666667776666643
No 71
>KOG0512|consensus
Probab=99.30 E-value=9.2e-12 Score=61.04 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=60.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHH-HHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLS-CLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~-~~~~l~~~~~ 72 (76)
.+|++.+.+...||||||-||...+.+++..|+ +.|++++.......||||+++...+.. .+.+|+....
T Consensus 118 ~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LL-qhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry 188 (228)
T KOG0512|consen 118 LSGANKEAKTNEGWTPLHSACKWNNFEVAGRLL-QHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY 188 (228)
T ss_pred HccCCcccccccCccchhhhhcccchhHHHHHH-hccCcccccccccchhhHHhhcccchHHHHHHHhhccc
Confidence 368999999999999999999999999999998 999999999999999999999766544 4566665443
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.29 E-value=8.6e-11 Score=54.22 Aligned_cols=62 Identities=37% Similarity=0.629 Sum_probs=56.5
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.++..|.+|+++|+..++.+++++++ ..+.....++..|.+|+|.+...+..+++++|++.+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li-~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~ 63 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLL-ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 34677999999999999999999998 888887888899999999999999999999999877
No 73
>KOG1710|consensus
Probab=99.26 E-value=5e-11 Score=62.46 Aligned_cols=66 Identities=20% Similarity=0.246 Sum_probs=59.1
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVR-AKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 6 ~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++|..|.+|.++|..|+..|+.++++.++ +.|+++|.. ...+-||||+|+..|+.++-++|+..|+
T Consensus 37 ~vn~~D~sGMs~LahAaykGnl~~v~lll-~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa 103 (396)
T KOG1710|consen 37 QVNQRDPSGMSVLAHAAYKGNLTLVELLL-ELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGA 103 (396)
T ss_pred hhhccCCCcccHHHHHHhcCcHHHHHHHH-HhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccC
Confidence 37888999999999999999999999998 999998875 4668899999999999999999998775
No 74
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.24 E-value=1.6e-11 Score=50.33 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=23.3
Q ss_pred hcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 36 EAG-GSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 36 ~~~-~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+.+ ..++.+|..|.||||+|+..|+.+++++|++.+
T Consensus 3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g 39 (56)
T PF13857_consen 3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG 39 (56)
T ss_dssp ---T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT
T ss_pred ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc
Confidence 444 788899999999999999999999999999665
No 75
>KOG0818|consensus
Probab=99.23 E-value=5.2e-11 Score=65.98 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=59.9
Q ss_pred ccccCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 2 TYEMSANSQMD-NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 2 ~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
+-|+++|..+. .|.||||.|+..|...-+++|+ -.|+++...|..|.||+.+|...||.++.+-|++
T Consensus 154 ~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~-vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 154 SLGAQANFFHPEKGNTPLHVAAKAGQILQAELLA-VYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred HcccccCCCCcccCCchhHHHHhccchhhhhHHh-hccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 35788888764 6899999999999999999998 9999999999999999999999999998776654
No 76
>KOG0705|consensus
Probab=99.22 E-value=8.1e-11 Score=66.15 Aligned_cols=68 Identities=19% Similarity=0.294 Sum_probs=60.8
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 6 ~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
+-..-+..|+|+||+||+.|++.+.++|+ =.|.+...+|..|.|+|.||.+.|.-+|++.|+.+|..+
T Consensus 653 ~~t~~~~~grt~LHLa~~~gnVvl~QLLi-Wyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 653 NETCGEGDGRTALHLAARKGNVVLAQLLI-WYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hccccCCCCcchhhhhhhhcchhHHHHHH-HhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 33444667899999999999999999998 789999999999999999999999999999999998653
No 77
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.21 E-value=1.4e-10 Score=67.39 Aligned_cols=60 Identities=35% Similarity=0.531 Sum_probs=53.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 12 DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA--------------KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 12 ~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~--------------~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|.||||+|+..++.++++.|+ +.|++++.++ ..|.+|||.|+..++.+++++|+++++
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL-~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLL-ERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHH-hCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence 46899999999999999999998 8899887653 358899999999999999999999874
No 78
>PF13606 Ank_3: Ankyrin repeat
Probab=99.19 E-value=6e-11 Score=42.78 Aligned_cols=26 Identities=31% Similarity=0.549 Sum_probs=21.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 47 DGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 47 ~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|.||||+|+..|+.+++++|+++|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~ga 26 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGA 26 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 37888999998889999998888863
No 79
>KOG0505|consensus
Probab=99.19 E-value=5.5e-11 Score=65.87 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=61.4
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|...+..+..|.|.+|.|+..|..++..+|+ ..|..++.+|.+|.+|||.|+..|..++.+.|+.+++
T Consensus 188 G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl-~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga 255 (527)
T KOG0505|consen 188 GAELDARHARGATALHVAAANGYTEVAALLL-QAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGA 255 (527)
T ss_pred cccccccccccchHHHHHHhhhHHHHHHHHH-HhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhc
Confidence 4555666666999999999999999999998 9999999999999999999999999999999988875
No 80
>KOG0507|consensus
Probab=99.18 E-value=1.2e-11 Score=70.87 Aligned_cols=59 Identities=25% Similarity=0.415 Sum_probs=23.7
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 68 (76)
....++.+|+|.+++.++.+++.+|+ ..++++..++..+.|++.+|++.|..++++.|+
T Consensus 110 a~~~e~~tplhlaaqhgh~dvv~~Ll-~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll 168 (854)
T KOG0507|consen 110 AVNIENETPLHLAAQHGHLEVVFYLL-KKNADPFIRNNSKETVLDLASRFGRAEVVQMLL 168 (854)
T ss_pred cccccCcCccchhhhhcchHHHHHHH-hcCCCccccCcccccHHHHHHHhhhhHHHHHHh
Confidence 33333444444444444444444443 334444344444444444444444444443333
No 81
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.18 E-value=1.3e-10 Score=42.71 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=22.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA 45 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 45 (76)
+|.||||+|+..++.+++++|+ ..|++++.++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLL-KHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHH-HTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHH-HCcCCCCCCC
Confidence 3677777777777777777776 6777666554
No 82
>PF13606 Ank_3: Ankyrin repeat
Probab=99.17 E-value=1e-10 Score=42.18 Aligned_cols=29 Identities=41% Similarity=0.751 Sum_probs=26.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCcc
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLY 42 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 42 (76)
+|+||||+|+..|+.+++++|+ +.|++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll-~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLL-EHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHH-HcCCCCC
Confidence 4899999999999999999999 8888765
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.11 E-value=3.5e-10 Score=56.72 Aligned_cols=65 Identities=25% Similarity=0.392 Sum_probs=59.7
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 6 ~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
..+..+..|.||+|+|+..++.++++.++ ..++.+...+..|.|++++++..++.+++..++..+
T Consensus 139 ~~~~~~~~g~tpl~~A~~~~~~~~~~~ll-~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 139 VNNLRDEDGNTPLHWAALNGDADIVELLL-EAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CccccCCCCCchhHHHHHcCchHHHHHHH-hcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 56666999999999999999999999998 899999999999999999999999999999988753
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.11 E-value=7e-10 Score=64.02 Aligned_cols=56 Identities=21% Similarity=0.296 Sum_probs=51.9
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 16 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|+.++..|+.+.++.|+ ..|++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL-~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga 139 (664)
T PTZ00322 84 VELCQLAASGDAVGARILL-TGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGA 139 (664)
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence 3578899999999999998 8999999999999999999999999999999999874
No 85
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.10 E-value=2.6e-10 Score=41.94 Aligned_cols=26 Identities=38% Similarity=0.493 Sum_probs=24.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 47 DGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 47 ~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|.||||+|+..++.+++++|+++|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga 26 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGA 26 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcC
Confidence 48899999999999999999999875
No 86
>KOG0783|consensus
Probab=99.10 E-value=5.7e-11 Score=69.24 Aligned_cols=65 Identities=22% Similarity=0.387 Sum_probs=60.6
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 7 ~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|.+|..|++++|+++..+...++++|+ +.|.++..+| ..|.||||-|...|+.+++..|+++|.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLl-qhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~ 110 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLL-QHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGR 110 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHH-hcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCC
Confidence 6788999999999999999999999998 8899999998 569999999999999999999999884
No 87
>KOG3676|consensus
Probab=99.09 E-value=3.8e-10 Score=65.10 Aligned_cols=68 Identities=22% Similarity=0.277 Sum_probs=51.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS--LYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~--~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.+|+|++.+|..|+|.||.....-..++...++ ..|+. ...++..|.|||.+|+..|+.++.+.+++.
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L-~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL-ELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHHHHHHHHHH-hcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 357777777878888887777776677777776 67777 667777788888888888888877777665
No 88
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.09 E-value=1.2e-09 Score=63.68 Aligned_cols=68 Identities=18% Similarity=0.274 Sum_probs=52.2
Q ss_pred ccCcccCCCCCCcHHH-HHHHcCCHHHHHHHHHhcCCC----------------------------cc------------
Q psy14142 4 EMSANSQMDNDVTPVY-LAAQEGHLEVLKFLVLEAGGS----------------------------LY------------ 42 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~-~a~~~~~~~~~~~l~~~~~~~----------------------------~~------------ 42 (76)
+.++|..|..|.|||| .|+..++.++++.|+ ..+.. ..
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl-~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~ 120 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLL-NLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQ 120 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHH-hCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccc
Confidence 6778888888999999 777788888888876 44410 00
Q ss_pred --ccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 43 --VRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 43 --~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.....|.||||+|+..++.+++++|+++|+
T Consensus 121 ~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GA 152 (743)
T TIGR00870 121 YTSEFTPGITALHLAAHRQNYEIVKLLLERGA 152 (743)
T ss_pred cccccCCCCcHHHHHHHhCCHHHHHHHHhCCC
Confidence 011358999999999999999999999874
No 89
>KOG4214|consensus
Probab=99.08 E-value=3e-10 Score=50.68 Aligned_cols=54 Identities=28% Similarity=0.428 Sum_probs=48.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA 56 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~ 56 (76)
+.|++++.+|+.|.|||.-|.+.||.+|+++|+ +.|++...+..+|.+.+.-+-
T Consensus 55 ~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL-~~GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 55 SIGANIQDKDKYGITPLLSAVWEGHRDCVKLLL-QNGADRTIHAPDGTALIEATE 108 (117)
T ss_pred HhccccCCccccCCcHHHHHHHHhhHHHHHHHH-HcCcccceeCCCchhHHhhcc
Confidence 468999999999999999999999999999998 999999998888887665443
No 90
>KOG0522|consensus
Probab=99.07 E-value=1.2e-09 Score=60.79 Aligned_cols=64 Identities=23% Similarity=0.432 Sum_probs=57.9
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
..++..|..|.||||+|+..|+...++.|+ ..++++..++..|.+|||.|...|+.+++..++.
T Consensus 46 ~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll-~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr 109 (560)
T KOG0522|consen 46 LVIDRRDPPGRTPLHLAVRLGHVEAARILL-SAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLR 109 (560)
T ss_pred ceeccccCCCCccHHHHHHhcCHHHHHHHH-hcCCCccccccccccHHHHHHHcCCHHHHHHHHH
Confidence 356778889999999999999999999998 9999999999999999999999999988766554
No 91
>KOG0507|consensus
Probab=99.06 E-value=4.4e-10 Score=64.77 Aligned_cols=71 Identities=28% Similarity=0.375 Sum_probs=63.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.+.+-++.++..|.+|+|+|+++|+.++++.++ ..+...+...-.|.+|||.+++.|+.+++.+|+++++.
T Consensus 70 e~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll-~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad 140 (854)
T KOG0507|consen 70 DYEALLDLCDTKGILPLHLAAWNGNLEIVKMLL-LQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD 140 (854)
T ss_pred cchhhhhhhhccCcceEEehhhcCcchHHHHHH-hcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCC
Confidence 445556778888999999999999999999998 77788888889999999999999999999999998763
No 92
>KOG2384|consensus
Probab=99.00 E-value=3.1e-09 Score=52.87 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=60.8
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
+.++|..|..|||+++.|++.|..+.+.+|+ ..| +.+...+..+.+.+++|...|..+++..|.++
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyll-grg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLL-GRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHh-ccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 4688999999999999999999999999998 777 88889999999999999999999999988774
No 93
>KOG1710|consensus
Probab=98.98 E-value=2.1e-09 Score=56.58 Aligned_cols=66 Identities=24% Similarity=0.426 Sum_probs=58.9
Q ss_pred ccccCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 2 TYEMSANSQ-MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68 (76)
Q Consensus 2 ~~~~~~~~~-~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 68 (76)
..|+|+|.. +..+.|||++|+..|+.++.+.++ +.|+.+...+.-|+|+-++|+.-|+.++|..+=
T Consensus 66 ~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlll-daGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 66 ELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLL-DAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred HhCCCcCcccccccccHHHHHHHcCCchHHHHHH-hccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 357888776 567899999999999999999998 999999999999999999999999999987653
No 94
>KOG0515|consensus
Probab=98.97 E-value=1.1e-09 Score=61.48 Aligned_cols=67 Identities=19% Similarity=0.314 Sum_probs=55.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHH--HHcCCHHHHHHHHh
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAA--AQMGCLSCLKWMEH 69 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a--~~~~~~~~~~~l~~ 69 (76)
..|+|+|..|.+||||||+|+..++..+++.|+ +.|+.+.... .++.|+..-+ ...|..+|..||..
T Consensus 604 ~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLV-e~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 604 EFGANVNAADSDGWTPLHCAASCNNVPMCKQLV-ESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred hcCCcccCccCCCCchhhhhhhcCchHHHHHHH-hccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 568999999999999999999999999999999 8888776654 6678887754 35677888888753
No 95
>KOG0511|consensus
Probab=98.95 E-value=5.4e-09 Score=56.77 Aligned_cols=58 Identities=19% Similarity=0.303 Sum_probs=53.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 15 VTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 15 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
..-+..||+.|..+.++.|+ +.|.++|..|+....||.+|+..||.+++++|+++|++
T Consensus 37 f~elceacR~GD~d~v~~LV-etgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLV-ETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred hHHHHHHhhcccHHHHHHHH-HhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 34467899999999999999 79999999999999999999999999999999999985
No 96
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.94 E-value=1.2e-09 Score=44.37 Aligned_cols=33 Identities=30% Similarity=0.552 Sum_probs=25.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLV 34 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 34 (76)
++|.++|.+|..|.||+|+|+..|+.+++++|+
T Consensus 22 ~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 22 EHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 468899999999999999999999999999874
No 97
>KOG3676|consensus
Probab=98.90 E-value=7.8e-09 Score=59.96 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=56.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 11 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
-..|..||.+|++.+..+++++|+ +.+++++.+|..|.|.||.....-..++.+++++.++-
T Consensus 237 ~YfGEyPLSfAAC~nq~eivrlLl-~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 237 FYFGEYPLSFAACTNQPEIVRLLL-AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred eeeccCchHHHHHcCCHHHHHHHH-hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 456889999999999999999998 89999999999999999999888778888999988764
No 98
>KOG4369|consensus
Probab=98.54 E-value=2.9e-08 Score=60.28 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=48.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVR-AKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+++...|..|.+|+..++-.||..+++.|+ ...+++..+ |+.+.|+|-+++..|+.+++++|+..++
T Consensus 778 ~rganiehrdkkgf~plImaatagh~tvV~~ll-k~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ga 848 (2131)
T KOG4369|consen 778 VRGANIEHRDKKGFVPLIMAATAGHITVVQDLL-KAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGA 848 (2131)
T ss_pred HhcccccccccccchhhhhhcccCchHHHHHHH-hhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhc
Confidence 356777777777777777777777777777776 666665543 4566777777777777777777776654
No 99
>KOG0506|consensus
Probab=98.53 E-value=8.5e-08 Score=53.51 Aligned_cols=61 Identities=26% Similarity=0.362 Sum_probs=54.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
++..++.+|+..|.+...+.++ -.|.+...+|.+.+|+||+|+..|+.++++||+....++
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~-l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~ 565 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFA-LQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVD 565 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHH-HhcccccccccccchhheeecccCceeHHHHHHHHHcCC
Confidence 4567889999999999888776 789999999999999999999999999999999865543
No 100
>KOG0783|consensus
Probab=98.47 E-value=3.7e-07 Score=54.17 Aligned_cols=55 Identities=20% Similarity=0.353 Sum_probs=50.7
Q ss_pred ccccCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Q psy14142 2 TYEMSANSQMD-NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQ 57 (76)
Q Consensus 2 ~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~ 57 (76)
-+|++++.+|. .|+|+||-|...|+++|+..|+ ..|.....+|.+|..||+..++
T Consensus 73 qhGidv~vqD~ESG~taLHRaiyyG~idca~lLL-~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 73 QHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL-SKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hcCceeeeccccccchHhhHhhhhchHHHHHHHH-hcCCceEEecccCCCHHHHHhh
Confidence 36899999986 6999999999999999999998 9999999999999999998776
No 101
>KOG0521|consensus
Probab=98.35 E-value=4.4e-07 Score=53.63 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=55.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 11 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
-..|++++|.++..+..-..++|+ +.|++++..+..|.+|+|.+...|+...+..+++.++-
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll-~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~ 714 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLL-QNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD 714 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHH-hcCCcchhhhccCCCcchhhhhhcccchhhhhcccccc
Confidence 456799999999999999999998 99999999999999999999999999998888887653
No 102
>KOG0818|consensus
Probab=98.18 E-value=9.6e-06 Score=45.97 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=47.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 16 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.-||-+++.++.+..-.|+ ..|+..+... ..|.||||+|++.|+..-+++|+-+|+-
T Consensus 135 rQLhasvRt~nlet~LRll-~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD 192 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLL-SLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD 192 (669)
T ss_pred HHHHHHhhcccHHHHHHHH-HcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC
Confidence 3568889999998665565 7899998876 6699999999999999999999888763
No 103
>KOG0511|consensus
Probab=98.15 E-value=1.1e-05 Score=44.48 Aligned_cols=55 Identities=31% Similarity=0.366 Sum_probs=43.6
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQM 58 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~ 58 (76)
+.|+++|..|....+||.+|+-.||.+++++|+ +.|+....-..+|. ..|+++..
T Consensus 57 etgvnVN~vD~fD~spL~lAsLcGHe~vvklLL-enGAiC~rdtf~G~-RC~YgaLn 111 (516)
T KOG0511|consen 57 ETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLL-ENGAICSRDTFDGD-RCHYGALN 111 (516)
T ss_pred HhCCCcchhhcccccHHHHHHHcCcHHHHHHHH-HcCCcccccccCcc-hhhhhhhh
Confidence 468999999999999999999999999999998 88885544334454 45565543
No 104
>KOG0782|consensus
Probab=98.09 E-value=7.6e-06 Score=47.23 Aligned_cols=63 Identities=22% Similarity=0.285 Sum_probs=35.2
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS--LYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~--~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.++...++.||+|+..|+-+++++++ +.+.. .+..+..|.|+||-|+..++-.+..+|+..|+
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyil-dh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdaga 958 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYIL-DHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGA 958 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHH-hcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcch
Confidence 34445566666666666666666665 43321 22334556666666665555555555555543
No 105
>KOG0782|consensus
Probab=98.04 E-value=1.3e-05 Score=46.39 Aligned_cols=63 Identities=27% Similarity=0.308 Sum_probs=57.0
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 8 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+..+..|.|.||.|+..+.-.+.++++ +.|+.....|..|.||-.-|.+.+..++..||.+..
T Consensus 928 d~~de~get~lhkaa~~~~r~vc~~lv-dagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 928 DMADETGETALHKAACQRNRAVCQLLV-DAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHhhhhhHHHHHHHHhcchHHHHHHH-hcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 445678999999999999999999998 999999999999999999999999999999987654
No 106
>KOG4369|consensus
Probab=98.01 E-value=8.3e-06 Score=50.40 Aligned_cols=57 Identities=28% Similarity=0.372 Sum_probs=53.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
+..|+|..+|..||.+.+++++ ..|+++..+|..|.+||.+++-.||..+|+.|+++
T Consensus 756 n~~t~LT~acaggh~e~vellv-~rganiehrdkkgf~plImaatagh~tvV~~llk~ 812 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLV-VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKA 812 (2131)
T ss_pred cccccccccccCccHHHHHHHH-HhcccccccccccchhhhhhcccCchHHHHHHHhh
Confidence 4578999999999999999998 99999999999999999999999999999988875
No 107
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.98 E-value=3.1e-05 Score=26.20 Aligned_cols=25 Identities=36% Similarity=0.563 Sum_probs=18.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 48 GMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 48 g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.+|+|+++..++.+++++|++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5677888777777888877777654
No 108
>KOG0520|consensus
Probab=97.92 E-value=2.9e-05 Score=46.98 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=41.9
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCcc------ccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLY------VRAKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~------~~~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
|..++.+|..|+||||||+..|+..++..|. ..++... .....|.|+-..|...|+..+..+|-+
T Consensus 631 ~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~-~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 631 GVAIDIRDRNGWTPLHWAAFRGREKLVASLI-ELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred ccccccccCCCCcccchHhhcCHHHHHHHHH-HhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 4567777777888888888888777777665 4444322 223446677777777777666655543
No 109
>KOG0521|consensus
Probab=97.88 E-value=1.4e-05 Score=47.64 Aligned_cols=65 Identities=18% Similarity=0.244 Sum_probs=57.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l 67 (76)
..|+++|..+..|.+|+|.+...|+......++ ..++..+..+.+|..|+++|....+.+++-++
T Consensus 677 ~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll-~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 677 QNGADVNALDSKGRTPLHHATASGHTSIACLLL-KRGADPNAFDPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred hcCCcchhhhccCCCcchhhhhhcccchhhhhc-cccccccccCccCcchhhHHhhhccccHHHHH
Confidence 468899999999999999999999999988887 89999999999999999999877776665544
No 110
>KOG3609|consensus
Probab=97.81 E-value=5e-05 Score=45.23 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=51.5
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCC------------------------------------CccccCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGG------------------------------------SLYVRAKD 47 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~------------------------------------~~~~~~~~ 47 (76)
..++|..|.-|+++++.|..+.+.++.++|+ +... .....-..
T Consensus 52 ~lninc~d~lGr~al~iai~nenle~~eLLl-~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ 130 (822)
T KOG3609|consen 52 KLNINCRDPLGRLALHIAIDNENLELQELLL-DTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTP 130 (822)
T ss_pred ccchhccChHhhhceecccccccHHHHHHHh-cCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCC
Confidence 3678888888988888888888888888776 3310 00011234
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 48 GMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 48 g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.||+.+|+..++.||+++|+.+|+
T Consensus 131 ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 131 DITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred CccHHHHHHHhcchHHHHHHHHcCC
Confidence 6799999999999999999999875
No 111
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.80 E-value=0.00011 Score=24.67 Aligned_cols=28 Identities=43% Similarity=0.782 Sum_probs=23.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCc
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSL 41 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~ 41 (76)
.+.+++++++..++.++++.++ ..+..+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll-~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLL-DKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HcCCCC
Confidence 3679999999999999999998 665543
No 112
>KOG0520|consensus
Probab=97.80 E-value=7.7e-06 Score=49.25 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=31.3
Q ss_pred cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 37 AGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 37 ~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+..++++|..|+||||+|+..|+..++.-|++.++
T Consensus 630 ~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga 665 (975)
T KOG0520|consen 630 DGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGA 665 (975)
T ss_pred cccccccccCCCCcccchHhhcCHHHHHHHHHHhcc
Confidence 455788899999999999999999999999887654
No 113
>KOG2505|consensus
Probab=97.77 E-value=8.6e-05 Score=42.26 Aligned_cols=45 Identities=22% Similarity=0.250 Sum_probs=40.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy14142 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA 56 (76)
Q Consensus 11 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~ 56 (76)
+..-.|+||+|+.+|...++..+| ..|+++..+|..|.||..++.
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~L-eeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFL-EEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHH-HhcCCchhcccCCCCcccccc
Confidence 344579999999999999999998 888999999999999998876
No 114
>KOG0522|consensus
Probab=97.76 E-value=8.9e-05 Score=42.33 Aligned_cols=57 Identities=18% Similarity=0.242 Sum_probs=44.5
Q ss_pred cHHHHHHHcCCHH-HHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 16 TPVYLAAQEGHLE-VLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 16 t~l~~a~~~~~~~-~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|+|++......+ +.+.+.......++.+|..|.||||+|...|+.+.++.|+..++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~A 79 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGA 79 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCC
Confidence 3478888777665 33433324566777889999999999999999999999999876
No 115
>KOG2384|consensus
Probab=97.14 E-value=0.00082 Score=34.17 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=32.8
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 38 GGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 38 ~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
+.+++.+|.-|.|+++-|+..|..+.+.||+..|...
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~ 38 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAF 38 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCccc
Confidence 4578889999999999999999999999999998543
No 116
>KOG0705|consensus
Probab=96.67 E-value=0.0036 Score=36.80 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=33.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS 40 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 40 (76)
||+|+...|..|.|+|.||.+.|.-+|+..|+ +.|+.
T Consensus 683 yg~dv~~rda~g~t~l~yar~a~sqec~d~ll-q~gcp 719 (749)
T KOG0705|consen 683 YGVDVMARDAHGRTALFYARQAGSQECIDVLL-QYGCP 719 (749)
T ss_pred hCccceecccCCchhhhhHhhcccHHHHHHHH-HcCCC
Confidence 68899999999999999999999999999998 77664
No 117
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.97 E-value=0.054 Score=28.69 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=36.3
Q ss_pred CHHHHHHHHHhcCCCcc---ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 26 HLEVLKFLVLEAGGSLY---VRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 26 ~~~~~~~l~~~~~~~~~---~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
...+.+++++..-..++ .+...|.|-|.-|..+++.+++.+|+++|++.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 45566666622223333 34577999999999999999999999999863
No 118
>KOG2505|consensus
Probab=94.52 E-value=0.14 Score=30.03 Aligned_cols=44 Identities=20% Similarity=0.126 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 27 LEVLKFLVLEAGGSLYV------RAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 27 ~~~~~~l~~~~~~~~~~------~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
...+++|. ..+...++ .+.--.|+||+|+..|.-+++.+|++.+
T Consensus 404 p~~ie~lk-en~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg 453 (591)
T KOG2505|consen 404 PDSIEALK-ENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG 453 (591)
T ss_pred hhHHHHHH-hcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc
Confidence 45667775 66655544 2333678999999999999999999887
No 119
>KOG3609|consensus
Probab=93.35 E-value=0.14 Score=31.67 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=45.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcC---CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 14 DVTPVYLAAQEGHLEVLKFLVLEAG---GSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 14 ~~t~l~~a~~~~~~~~~~~l~~~~~---~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+.-.+..++..|....++..++... -+++..|.-|+++++.|....+.+++++|+++.
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~ 85 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTS 85 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCc
Confidence 3445677899999888877664433 356678888999999999999999999998874
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.80 E-value=0.39 Score=20.69 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=38.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 15 VTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 15 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
...+..|...|+.++++.++ +.+. + ....+..|...=+.+++++|++.-..+
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~-~~~~-~------~~~~l~~AI~~H~n~i~~~l~~~y~~~ 58 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICL-KKNK-P------DNDCLEYAIKSHNNEIADWLIENYNLK 58 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHH-HHhc-c------HHHHHHHHHHHhhHHHHHHHHHhcCCC
Confidence 34578899999999999886 4331 1 134788898888899999998864433
No 121
>KOG1709|consensus
Probab=90.66 E-value=0.35 Score=25.73 Aligned_cols=38 Identities=26% Similarity=0.159 Sum_probs=27.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS 40 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 40 (76)
++|+..|..|....|+=.+|...++....+.|+ +.|..
T Consensus 3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv-~~gv~ 40 (271)
T KOG1709|consen 3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLV-EAGVP 40 (271)
T ss_pred ccCCCccccChhhCCchHHHHHccHHHHHHHHH-HcCCc
Confidence 567777777777777777787777777777777 55543
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=88.24 E-value=2.4 Score=21.99 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 18 VYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 18 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
+.+|+..|....+.-.+ ..|+..+. +.|..|+..++-.++.+++.
T Consensus 147 l~~a~~kgll~F~letl-kygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETL-KYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHH-HcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 35667777766555444 55555543 47777777777777777664
No 123
>KOG1709|consensus
Probab=71.22 E-value=11 Score=20.43 Aligned_cols=38 Identities=8% Similarity=-0.074 Sum_probs=31.5
Q ss_pred hcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 36 EAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 36 ~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
+.|+.+|..+..+.|+-.+|...++.+..+.|++.+..
T Consensus 3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred ccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 67888888888888998888888888888888887643
No 124
>KOG3836|consensus
Probab=69.62 E-value=2 Score=26.14 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=23.5
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLV 34 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 34 (76)
+++..+..+..+.+|+|+++..|...+++.++
T Consensus 418 ~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~ 449 (605)
T KOG3836|consen 418 KGAHPNDDDKFGFTPLHIPQISGDPRIIQLLL 449 (605)
T ss_pred ccCccchhcccccccccccCCCCCHHHhhhhh
Confidence 45666777777788888888888877777654
No 125
>COG2169 Ada Adenosine deaminase [Nucleotide transport and metabolism]
Probab=43.62 E-value=45 Score=17.55 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=18.0
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 44 RAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 44 ~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+..-|.||+.++... ....+..++..+.
T Consensus 119 K~~~G~Tp~~ya~a~-R~~~a~~~L~~g~ 146 (187)
T COG2169 119 KAITGMTPKEYARAR-RMGRARKQLRMGA 146 (187)
T ss_pred HHHhCCCHHHHHHHH-HHHHHHHHHhCCC
Confidence 445688898887654 4455555666655
No 126
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=41.26 E-value=32 Score=15.83 Aligned_cols=13 Identities=8% Similarity=0.304 Sum_probs=10.1
Q ss_pred HHHHHHHHhCCCc
Q psy14142 61 LSCLKWMEHRPAV 73 (76)
Q Consensus 61 ~~~~~~l~~~~~~ 73 (76)
.++|+||++++.+
T Consensus 41 sElVdWLi~~g~~ 53 (93)
T cd04440 41 SKLVDWLLAQGDC 53 (93)
T ss_pred hHHHHHHHHcCCC
Confidence 4789999988654
No 127
>PF09722 DUF2384: Protein of unknown function (DUF2384); InterPro: IPR024467 This domain is found predominantly in proteobacterial proteins. Its function in unknown.
Probab=38.08 E-value=32 Score=13.55 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=13.5
Q ss_pred CCCCcHHHHHHH-cCCHHHHHHH
Q psy14142 46 KDGMAPIHAAAQ-MGCLSCLKWM 67 (76)
Q Consensus 46 ~~g~tpl~~a~~-~~~~~~~~~l 67 (76)
-.|.+|+.+... .|...+.++|
T Consensus 25 l~g~~Plel~~t~~G~~~V~~~L 47 (54)
T PF09722_consen 25 LGGRTPLELLRTEAGAERVLDYL 47 (54)
T ss_pred hCCCCHHHHHcChHHHHHHHHHH
Confidence 458899998773 3334444444
No 128
>cd04439 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and by the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=34.06 E-value=48 Score=14.68 Aligned_cols=13 Identities=8% Similarity=0.309 Sum_probs=8.9
Q ss_pred HHHHHHHHhCCCc
Q psy14142 61 LSCLKWMEHRPAV 73 (76)
Q Consensus 61 ~~~~~~l~~~~~~ 73 (76)
.++|.||++++.+
T Consensus 32 selVdWL~~~~~~ 44 (81)
T cd04439 32 NEFVSWLLEIGEI 44 (81)
T ss_pred HHHHHHHHHcCCC
Confidence 4678888876643
No 129
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=33.70 E-value=79 Score=18.05 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=22.6
Q ss_pred HHHHHHHHhcCCCccccCCCCCcHH-HHHHHcCCHHH
Q psy14142 28 EVLKFLVLEAGGSLYVRAKDGMAPI-HAAAQMGCLSC 63 (76)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~g~tpl-~~a~~~~~~~~ 63 (76)
++...+++..+..+..+..-|.|++ |-|...|..++
T Consensus 50 ~m~~~lle~~~~kv~~~~~lG~t~v~~~Al~~G~IDi 86 (300)
T COG1732 50 NILKQLLEKNGIKVEDKTGLGGTAVVRNALKSGDIDI 86 (300)
T ss_pred HHHHHHHHhcCCceeeccCCCchHHHHHHHHcCCCCe
Confidence 3455555556666666677777755 66767666554
No 130
>cd04441 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=33.54 E-value=50 Score=14.88 Aligned_cols=13 Identities=8% Similarity=0.330 Sum_probs=9.9
Q ss_pred CHHHHHHHHhCCC
Q psy14142 60 CLSCLKWMEHRPA 72 (76)
Q Consensus 60 ~~~~~~~l~~~~~ 72 (76)
-.|+|+||++++.
T Consensus 35 GsElVdWL~~~~~ 47 (85)
T cd04441 35 GSEFIDWLLQEGE 47 (85)
T ss_pred chHHHHHHHHcCC
Confidence 4578899988774
No 131
>PF13010 pRN1_helical: Primase helical domain; PDB: 1RO0_A 1RNI_A 1RO2_A 3M1M_A.
Probab=31.33 E-value=20 Score=17.41 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=10.9
Q ss_pred HcCCHHHHHHHHhCCCccC
Q psy14142 57 QMGCLSCLKWMEHRPAVKL 75 (76)
Q Consensus 57 ~~~~~~~~~~l~~~~~~~~ 75 (76)
..|...++.+|+++|..++
T Consensus 78 SRGDW~v~~~LlsHGvtd~ 96 (135)
T PF13010_consen 78 SRGDWHVIKYLLSHGVTDL 96 (135)
T ss_dssp HHHHHHHHHHHHHTT---H
T ss_pred ccCchHHHHHHHHcCCCCH
Confidence 3455667788888886653
No 132
>COG4003 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.58 E-value=78 Score=14.41 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=15.3
Q ss_pred cHHHHHHHcC----CHHHHHHHHhCCCcc
Q psy14142 50 APIHAAAQMG----CLSCLKWMEHRPAVK 74 (76)
Q Consensus 50 tpl~~a~~~~----~~~~~~~l~~~~~~~ 74 (76)
|.+.+..+.. -.++++||.+.|-++
T Consensus 36 tV~D~L~rCdT~EEAlEii~yleKrGEi~ 64 (98)
T COG4003 36 TVIDFLRRCDTEEEALEIINYLEKRGEIT 64 (98)
T ss_pred hHHHHHHHhCcHHHHHHHHHHHHHhCCCC
Confidence 4455555443 346778888877654
No 133
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]
Probab=24.93 E-value=60 Score=19.21 Aligned_cols=15 Identities=7% Similarity=0.204 Sum_probs=12.2
Q ss_pred CHHHHHHHHhCCCcc
Q psy14142 60 CLSCLKWMEHRPAVK 74 (76)
Q Consensus 60 ~~~~~~~l~~~~~~~ 74 (76)
.++++++|+++|.|+
T Consensus 403 ~PD~iryLv~qG~Ik 417 (526)
T COG5064 403 RPDIIRYLVSQGFIK 417 (526)
T ss_pred CchHHHHHHHccchh
Confidence 568889999988775
No 134
>cd04443 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.
Probab=23.74 E-value=87 Score=13.97 Aligned_cols=12 Identities=8% Similarity=0.260 Sum_probs=8.4
Q ss_pred HHHHHHHHhCCC
Q psy14142 61 LSCLKWMEHRPA 72 (76)
Q Consensus 61 ~~~~~~l~~~~~ 72 (76)
.++|+||++.+.
T Consensus 34 selVdWL~~~~~ 45 (83)
T cd04443 34 CDLVSWLIEVGL 45 (83)
T ss_pred HHHHHHHHHcCC
Confidence 467888887653
No 135
>cd01397 HAT_MBD Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The Drosophila melanogaster toutatis protein, a putative subunit of the chromatin-remodeling complex, and other such proteins in this group share a similar domain architecture with BAZ2A, as does the Caenorhabditis elegans flectin homolog.
Probab=23.69 E-value=84 Score=13.79 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=9.4
Q ss_pred CHHHHHHHHhCCCccC
Q psy14142 60 CLSCLKWMEHRPAVKL 75 (76)
Q Consensus 60 ~~~~~~~l~~~~~~~~ 75 (76)
..+++++|..++...|
T Consensus 40 ~~ev~~yL~~~~~~~L 55 (73)
T cd01397 40 YPEVIKYLSKNGISLL 55 (73)
T ss_pred HHHHHHHHHhCCccCc
Confidence 4566777776554444
No 136
>PF04964 Flp_Fap: Flp/Fap pilin component; InterPro: IPR007047 This entry is for the fimbriae associated protein Flp/Fap pilin component.
Probab=23.33 E-value=66 Score=12.48 Aligned_cols=14 Identities=29% Similarity=0.413 Sum_probs=9.9
Q ss_pred ccCCCCCcHHHHHH
Q psy14142 43 VRAKDGMAPIHAAA 56 (76)
Q Consensus 43 ~~~~~g~tpl~~a~ 56 (76)
.+|.+|.|...|+.
T Consensus 2 ~~de~GaTaiEYal 15 (46)
T PF04964_consen 2 LRDERGATAIEYAL 15 (46)
T ss_pred CcccccchHHHHHH
Confidence 35677888877764
No 137
>cd04448 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol phosphate kinase) domain. PIKfyve-like proteins are important phosphatidylinositol (3)-monophosphate (PtdIns(3)P)-5-kinases, producing PtdIns(3,5)P2, which plays a major role in multivesicular body (MVB) sorting and control of retrograde traffic from the vacuole back to the endosome and/or Golgi. PIKfyve itself has been shown to be play a role in regulating early-endosome-to-trans-Golgi network (TGN) retrograde trafficking.
Probab=22.03 E-value=94 Score=13.72 Aligned_cols=12 Identities=8% Similarity=0.379 Sum_probs=8.4
Q ss_pred HHHHHHHHhCCC
Q psy14142 61 LSCLKWMEHRPA 72 (76)
Q Consensus 61 ~~~~~~l~~~~~ 72 (76)
.++|+||+.++.
T Consensus 32 selVdWL~~~~~ 43 (81)
T cd04448 32 KELVNWLIRQGK 43 (81)
T ss_pred HHHHHHHHHcCC
Confidence 477888887653
No 138
>cd04442 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=21.16 E-value=1e+02 Score=13.78 Aligned_cols=12 Identities=8% Similarity=0.407 Sum_probs=7.9
Q ss_pred HHHHHHHHhCCC
Q psy14142 61 LSCLKWMEHRPA 72 (76)
Q Consensus 61 ~~~~~~l~~~~~ 72 (76)
.++|+||+.++.
T Consensus 32 selVdWL~~~~~ 43 (82)
T cd04442 32 KELIDWLIEHKE 43 (82)
T ss_pred HHHHHHHHHcCC
Confidence 366777777653
No 139
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=20.41 E-value=93 Score=13.10 Aligned_cols=14 Identities=29% Similarity=0.411 Sum_probs=5.9
Q ss_pred HHHHcCCHHHHHHH
Q psy14142 20 LAAQEGHLEVLKFL 33 (76)
Q Consensus 20 ~a~~~~~~~~~~~l 33 (76)
.++..|..+.+..+
T Consensus 5 ~~A~~GD~~A~~~I 18 (65)
T PF12645_consen 5 KAAKQGDPEAMEEI 18 (65)
T ss_pred HHHHcCCHHHHHHH
Confidence 34444444444333
Done!