Query psy14142
Match_columns 76
No_of_seqs 104 out of 2299
Neff 11.9
Searched_HMMs 29240
Date Fri Aug 16 20:36:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14142.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14142hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.3E-22 2.8E-26 87.4 8.2 70 2-72 23-92 (93)
2 4gpm_A Engineered protein OR26 99.9 4.3E-22 1.5E-26 96.6 7.8 69 3-72 92-160 (169)
3 4gpm_A Engineered protein OR26 99.9 3.3E-21 1.1E-25 93.5 8.2 70 2-72 58-127 (169)
4 3aaa_C Myotrophin, protein V-1 99.8 6.4E-20 2.2E-24 84.7 8.0 70 2-72 28-97 (123)
5 4b93_B Ankyrin repeat domain-c 99.8 8.8E-20 3E-24 93.7 7.1 70 2-72 140-209 (269)
6 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.9E-19 1.3E-23 89.8 9.0 71 1-72 57-127 (239)
7 1d9s_A Cyclin-dependent kinase 99.8 9.2E-20 3.1E-24 85.4 6.2 69 3-72 66-135 (136)
8 1dcq_A PYK2-associated protein 99.8 1.1E-19 3.8E-24 93.7 6.9 72 2-74 193-264 (278)
9 2jab_A H10-2-G3; HER2, darpin, 99.8 4.7E-19 1.6E-23 83.0 7.9 70 2-72 35-104 (136)
10 1bi7_B P16INK4A, MTS1, multipl 99.8 3.1E-19 1.1E-23 85.3 7.3 70 2-72 65-135 (156)
11 3c5r_A BARD-1, BRCA1-associate 99.8 3.7E-19 1.3E-23 83.4 7.4 70 2-72 31-100 (137)
12 2jab_A H10-2-G3; HER2, darpin, 99.8 5.2E-19 1.8E-23 82.9 7.8 69 2-71 68-136 (136)
13 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-19 6.6E-24 82.2 5.8 71 1-72 29-99 (115)
14 2vge_A RELA-associated inhibit 99.8 8.2E-19 2.8E-23 88.4 7.9 70 2-72 42-111 (229)
15 3twr_A Tankyrase-2; ankyrin re 99.8 1.3E-18 4.5E-23 83.5 8.2 70 2-72 63-132 (165)
16 1awc_B Protein (GA binding pro 99.8 1.6E-18 5.4E-23 82.5 8.3 70 2-72 55-124 (153)
17 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.4E-18 4.9E-23 83.1 7.8 69 3-72 59-127 (162)
18 3lvq_E ARF-GAP with SH3 domain 99.8 5.5E-19 1.9E-23 96.7 7.1 70 2-72 195-264 (497)
19 4hbd_A KN motif and ankyrin re 99.8 8.8E-19 3E-23 90.1 7.4 70 3-73 205-275 (276)
20 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.9E-18 6.5E-23 82.3 8.1 68 2-70 56-123 (156)
21 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.7E-18 5.9E-23 82.8 7.8 70 2-72 91-161 (162)
22 3f6q_A Integrin-linked protein 99.8 2.4E-18 8.2E-23 83.6 8.2 69 3-72 61-129 (179)
23 3deo_A Signal recognition part 99.8 2.8E-18 9.5E-23 83.8 8.4 68 4-72 66-134 (183)
24 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.1E-18 7.2E-23 79.4 7.6 67 4-71 58-124 (126)
25 3ui2_A Signal recognition part 99.8 3.8E-18 1.3E-22 86.5 9.0 68 4-72 67-135 (244)
26 2zgd_A 3 repeat synthetic anky 99.8 2.5E-18 8.4E-23 78.2 7.5 64 3-67 46-109 (110)
27 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.7E-18 1.3E-22 75.5 7.6 59 13-72 1-59 (93)
28 4g8k_A 2-5A-dependent ribonucl 99.8 1.4E-18 4.8E-23 91.0 6.8 71 2-72 227-297 (337)
29 3ehr_A Osteoclast-stimulating 99.8 1.8E-18 6.2E-23 86.4 6.9 70 2-72 94-164 (222)
30 3v30_A DNA-binding protein rfx 99.8 4.9E-18 1.7E-22 82.0 7.9 68 3-71 58-125 (172)
31 1d9s_A Cyclin-dependent kinase 99.8 4.9E-19 1.7E-23 82.9 3.9 68 3-72 34-102 (136)
32 2y1l_E Darpin-8.4; hydrolase-i 99.8 7.5E-18 2.6E-22 81.3 8.2 67 4-71 70-136 (169)
33 2b0o_E UPLC1; arfgap, structur 99.8 1.5E-18 5E-23 90.4 5.8 69 2-71 214-282 (301)
34 2rfm_A Putative ankyrin repeat 99.8 6.1E-18 2.1E-22 82.9 7.6 68 3-71 90-157 (192)
35 3c5r_A BARD-1, BRCA1-associate 99.8 1.4E-17 4.6E-22 78.0 8.5 67 4-72 1-67 (137)
36 1oy3_D Transcription factor in 99.8 5.4E-18 1.8E-22 86.6 7.6 69 3-72 180-249 (282)
37 1s70_B 130 kDa myosin-binding 99.8 7E-18 2.4E-22 87.0 7.9 70 2-72 61-130 (299)
38 2y1l_E Darpin-8.4; hydrolase-i 99.8 9E-18 3.1E-22 81.0 7.8 69 2-71 101-169 (169)
39 3v31_A Ankyrin repeat family A 99.8 9.9E-18 3.4E-22 80.6 7.8 67 4-71 59-125 (167)
40 1yyh_A HN1;, notch 1, ankyrin 99.8 8.5E-18 2.9E-22 85.3 7.9 70 2-72 145-214 (253)
41 3utm_A Tankyrase-1; tankyrase, 99.8 9.6E-18 3.3E-22 87.6 8.1 70 2-72 235-304 (351)
42 3v30_A DNA-binding protein rfx 99.7 8E-18 2.8E-22 81.2 7.0 69 2-71 90-158 (172)
43 1bd8_A P19INK4D CDK4/6 inhibit 99.7 1.6E-17 5.3E-22 79.1 7.5 67 2-70 89-155 (156)
44 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2.1E-17 7.4E-22 76.0 7.7 70 2-72 23-92 (126)
45 2rfm_A Putative ankyrin repeat 99.7 9.7E-18 3.3E-22 82.1 6.7 69 2-71 122-190 (192)
46 2xai_A ASB-9, ankyrin repeat a 99.7 2.1E-17 7.1E-22 84.2 8.0 70 2-72 24-93 (261)
47 3f6q_A Integrin-linked protein 99.7 5.4E-17 1.8E-21 78.8 9.1 68 4-72 29-96 (179)
48 3lvq_E ARF-GAP with SH3 domain 99.7 1.2E-17 4E-22 91.6 7.1 70 2-72 153-231 (497)
49 2f8y_A Notch homolog 1, transl 99.7 3.6E-17 1.2E-21 81.4 8.3 67 4-71 115-181 (223)
50 1awc_B Protein (GA binding pro 99.7 3.7E-17 1.3E-21 77.7 7.9 65 2-67 88-152 (153)
51 4hbd_A KN motif and ankyrin re 99.7 3.3E-17 1.1E-21 84.3 8.2 67 3-70 172-238 (276)
52 3jue_A Arfgap with coiled-coil 99.7 2.8E-17 9.6E-22 87.6 8.1 69 3-72 222-292 (368)
53 2f8y_A Notch homolog 1, transl 99.7 3.7E-17 1.3E-21 81.4 8.1 71 2-73 146-216 (223)
54 1wdy_A 2-5A-dependent ribonucl 99.7 2.6E-17 8.8E-22 84.0 7.5 71 2-72 207-277 (285)
55 1dcq_A PYK2-associated protein 99.7 3.4E-17 1.2E-21 84.5 8.0 65 7-72 162-229 (278)
56 3v31_A Ankyrin repeat family A 99.7 2.9E-17 1E-21 78.9 7.3 69 3-72 25-93 (167)
57 2dzn_A Probable 26S proteasome 99.7 3.5E-17 1.2E-21 81.6 7.6 65 3-68 129-194 (228)
58 1k1a_A B-cell lymphoma 3-encod 99.7 6.7E-17 2.3E-21 81.1 8.2 70 2-72 137-207 (241)
59 1ikn_D Protein (I-kappa-B-alph 99.7 7.1E-18 2.4E-22 84.8 4.5 63 8-71 111-174 (236)
60 3utm_A Tankyrase-1; tankyrase, 99.7 1.2E-16 4.2E-21 83.5 9.3 67 4-71 48-114 (351)
61 3aji_A 26S proteasome non-ATPa 99.7 6.6E-17 2.3E-21 80.8 8.0 69 3-72 128-196 (231)
62 3twr_A Tankyrase-2; ankyrin re 99.7 1.8E-16 6E-21 76.1 9.2 68 4-72 32-99 (165)
63 1bi7_B P16INK4A, MTS1, multipl 99.7 5.6E-18 1.9E-22 80.9 3.9 69 2-72 33-102 (156)
64 1n11_A Ankyrin; clathrin, BAND 99.7 3.7E-17 1.3E-21 87.9 7.2 69 3-72 300-368 (437)
65 3hra_A Ankyrin repeat family p 99.7 6.9E-17 2.3E-21 79.4 7.5 66 5-71 131-201 (201)
66 2dzn_A Probable 26S proteasome 99.7 1.8E-16 6.1E-21 79.1 9.0 69 5-74 98-166 (228)
67 3hra_A Ankyrin repeat family p 99.7 1.7E-16 5.8E-21 78.0 8.8 67 5-72 30-96 (201)
68 3d9h_A CDNA FLJ77766, highly s 99.7 7.7E-17 2.6E-21 83.1 7.7 68 3-71 81-148 (285)
69 4b93_B Ankyrin repeat domain-c 99.7 1E-16 3.4E-21 82.4 8.0 68 2-70 74-141 (269)
70 2rfa_A Transient receptor pote 99.7 4.4E-17 1.5E-21 81.6 6.4 68 3-71 143-220 (232)
71 2b0o_E UPLC1; arfgap, structur 99.7 6.9E-17 2.4E-21 84.1 7.2 69 3-72 173-250 (301)
72 3kea_A K1L; tropism, ANK repea 99.7 6.6E-17 2.2E-21 83.4 7.0 71 2-73 83-154 (285)
73 2pnn_A Transient receptor pote 99.7 2.3E-17 8E-22 84.4 5.3 71 3-74 173-259 (273)
74 3b7b_A Euchromatic histone-lys 99.7 1.3E-16 4.5E-21 80.0 7.9 69 3-72 133-201 (237)
75 3ljn_A Hypothetical protein; a 99.7 3.4E-17 1.1E-21 86.5 5.9 65 7-72 204-268 (364)
76 2etb_A Transient receptor pote 99.7 2.8E-17 9.6E-22 83.4 5.4 69 3-72 161-245 (256)
77 2fo1_E LIN-12 protein; beta-ba 99.7 1.7E-16 5.8E-21 84.4 8.6 68 4-72 303-370 (373)
78 1oy3_D Transcription factor in 99.7 2.7E-16 9.4E-21 80.3 9.0 69 3-72 147-216 (282)
79 2rfa_A Transient receptor pote 99.7 2.2E-16 7.6E-21 79.0 8.5 68 4-72 27-99 (232)
80 3ljn_A Hypothetical protein; a 99.7 4.8E-17 1.6E-21 85.9 6.3 70 2-72 161-235 (364)
81 2zgd_A 3 repeat synthetic anky 99.7 1.1E-16 3.7E-21 72.8 6.6 65 7-72 17-81 (110)
82 3jue_A Arfgap with coiled-coil 99.7 6.5E-17 2.2E-21 86.2 6.7 69 2-71 256-324 (368)
83 2etb_A Transient receptor pote 99.7 6.5E-17 2.2E-21 82.0 6.2 69 2-71 111-204 (256)
84 3jxi_A Vanilloid receptor-rela 99.7 3.7E-17 1.3E-21 83.0 5.3 69 3-72 165-249 (260)
85 3b7b_A Euchromatic histone-lys 99.7 3.4E-16 1.2E-20 78.5 8.5 67 4-71 34-100 (237)
86 3jxi_A Vanilloid receptor-rela 99.7 7.7E-17 2.6E-21 81.9 6.2 69 2-71 114-208 (260)
87 1yyh_A HN1;, notch 1, ankyrin 99.7 1.7E-16 5.8E-21 80.6 7.4 69 2-71 178-246 (253)
88 1sw6_A Regulatory protein SWI6 99.7 5.4E-17 1.8E-21 85.1 5.5 68 2-70 118-189 (327)
89 1n11_A Ankyrin; clathrin, BAND 99.7 1.3E-16 4.5E-21 85.8 7.1 67 4-71 37-103 (437)
90 2xai_A ASB-9, ankyrin repeat a 99.7 2.1E-16 7.1E-21 80.6 7.3 69 2-72 122-190 (261)
91 3aji_A 26S proteasome non-ATPa 99.7 3.9E-16 1.3E-20 78.1 8.0 66 4-70 63-128 (231)
92 2pnn_A Transient receptor pote 99.7 1.1E-16 3.7E-21 81.9 6.0 69 2-71 122-216 (273)
93 2fo1_E LIN-12 protein; beta-ba 99.7 1.6E-16 5.3E-21 84.5 6.8 69 2-71 154-222 (373)
94 2l6b_A NR1C; ankyrin, consensu 99.7 1.6E-16 5.6E-21 72.4 5.9 63 9-72 4-66 (115)
95 1ikn_D Protein (I-kappa-B-alph 99.7 9E-16 3.1E-20 77.1 8.8 65 6-71 37-101 (236)
96 4g8k_A 2-5A-dependent ribonucl 99.7 5.9E-16 2E-20 81.1 8.4 64 3-72 262-325 (337)
97 3t8k_A Uncharacterized protein 99.7 1.7E-17 5.9E-22 81.5 2.2 66 3-69 64-141 (186)
98 3d9h_A CDNA FLJ77766, highly s 99.7 6.1E-16 2.1E-20 79.8 7.7 68 3-72 179-246 (285)
99 1wdy_A 2-5A-dependent ribonucl 99.7 9E-16 3.1E-20 78.3 8.1 67 4-71 28-95 (285)
100 2vge_A RELA-associated inhibit 99.7 2E-17 6.7E-22 83.3 1.9 69 2-71 75-146 (229)
101 3kea_A K1L; tropism, ANK repea 99.7 1.4E-16 4.9E-21 82.2 5.2 66 3-71 53-118 (285)
102 1k1a_A B-cell lymphoma 3-encod 99.7 1.3E-15 4.5E-20 76.4 8.4 69 3-72 35-103 (241)
103 3ehr_A Osteoclast-stimulating 99.7 6.4E-17 2.2E-21 80.8 3.5 69 4-73 130-198 (222)
104 1s70_B 130 kDa myosin-binding 99.7 1.8E-15 6.2E-20 78.0 8.8 63 9-72 194-256 (299)
105 3eu9_A Huntingtin-interacting 99.7 7.9E-16 2.7E-20 77.0 7.1 70 3-73 165-235 (240)
106 1ycs_B 53BP2, P53BP2; ankyrin 99.6 5.6E-16 1.9E-20 78.2 5.6 69 2-72 26-94 (239)
107 3t8k_A Uncharacterized protein 99.6 7E-17 2.4E-21 79.3 2.0 68 2-70 102-176 (186)
108 3aaa_C Myotrophin, protein V-1 99.6 2.9E-15 9.9E-20 69.0 7.0 61 11-72 4-64 (123)
109 3ui2_A Signal recognition part 99.6 2.1E-15 7.1E-20 76.5 6.3 68 2-70 98-182 (244)
110 3deo_A Signal recognition part 99.6 2E-15 6.8E-20 73.6 6.0 56 2-58 97-153 (183)
111 1sw6_A Regulatory protein SWI6 99.6 7E-15 2.4E-19 77.1 6.7 67 5-72 192-307 (327)
112 3eu9_A Huntingtin-interacting 99.6 1.7E-14 5.8E-19 72.1 7.8 68 3-71 31-99 (240)
113 2aja_A Ankyrin repeat family p 99.4 6.3E-15 2.1E-19 78.8 -1.7 57 13-71 127-186 (376)
114 2aja_A Ankyrin repeat family p 99.3 3.4E-13 1.2E-17 72.2 2.4 56 15-71 164-222 (376)
115 1gp8_A Protein (scaffolding pr 57.2 7.6 0.00026 14.2 2.2 16 18-33 17-32 (40)
116 3zrh_A Ubiquitin thioesterase 40.3 54 0.0018 19.0 6.5 48 21-69 29-90 (454)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=8.3e-22 Score=87.40 Aligned_cols=70 Identities=39% Similarity=0.577 Sum_probs=66.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 23 ~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 23 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 468899999999999999999999999999998 8999999999999999999999999999999999886
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=4.3e-22 Score=96.61 Aligned_cols=69 Identities=28% Similarity=0.442 Sum_probs=40.2
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|+++|.++..|+||||+|+..|+.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 92 ~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 92 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45555555556666666666666666666655 5556665556666666666666666666666665553
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=3.3e-21 Score=93.49 Aligned_cols=70 Identities=30% Similarity=0.482 Sum_probs=61.1
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 58 ~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 58 SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 357888888888999999999999999999888 8888888888889999999999999999999988764
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=6.4e-20 Score=84.71 Aligned_cols=70 Identities=27% Similarity=0.464 Sum_probs=65.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|.+++..+..|.||||+|+..++.+++++|+ +.+++++.++..|.||||+|+..++.+++++|+++++
T Consensus 28 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 97 (123)
T 3aaa_C 28 AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97 (123)
T ss_dssp HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 457889999999999999999999999999998 8999999999999999999999999999999999864
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=8.8e-20 Score=93.67 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=66.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.+|..|.||||+|+..|+.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 140 ~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga 209 (269)
T 4b93_B 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLL-QHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGA 209 (269)
T ss_dssp HTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 468899999999999999999999999999998 8999999999999999999999999999999999874
No 6
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=3.9e-19 Score=89.75 Aligned_cols=71 Identities=27% Similarity=0.372 Sum_probs=66.6
Q ss_pred CccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 1 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+..|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 57 l~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 127 (239)
T 1ycs_B 57 IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127 (239)
T ss_dssp TSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3568899999999999999999999999999998 8899999999999999999999999999999999874
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.81 E-value=9.2e-20 Score=85.44 Aligned_cols=69 Identities=26% Similarity=0.282 Sum_probs=57.1
Q ss_pred cccCcccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDN-DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++.++.. |.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 66 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 66 HGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56778888887 888888888888888888887 7888888888888888888888888888888887664
No 8
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1.1e-19 Score=93.69 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=64.6
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++++..
T Consensus 193 ~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 193 QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL-RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 357889999999999999999999999999998 899999999999999999999999999999999877643
No 9
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.80 E-value=4.7e-19 Score=83.03 Aligned_cols=70 Identities=29% Similarity=0.491 Sum_probs=55.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.+++++.++..|.||||+|+..++.+++++|+++++
T Consensus 35 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 104 (136)
T 2jab_A 35 ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104 (136)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 356777777778888888888888888888887 7788888788888888888888888888888887653
No 10
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.80 E-value=3.1e-19 Score=85.26 Aligned_cols=70 Identities=29% Similarity=0.369 Sum_probs=64.3
Q ss_pred ccccCcccCCCCCCc-HHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVT-PVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.| |||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 65 ~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga 135 (156)
T 1bi7_B 65 LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 135 (156)
T ss_dssp TTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH-HHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-
T ss_pred HcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC
Confidence 468899999999998 999999999999999998 8899999999999999999999999999999998875
No 11
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=3.7e-19 Score=83.35 Aligned_cols=70 Identities=23% Similarity=0.311 Sum_probs=58.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.++.++.++..|.||||+|+..++.+++++|+++++
T Consensus 31 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 100 (137)
T 3c5r_A 31 QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100 (137)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 356788888888888888888888888888887 7888888888888888888888888888888888754
No 12
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.80 E-value=5.2e-19 Score=82.85 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=64.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++.|
T Consensus 68 ~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 68 KNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL-KHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 467899999999999999999999999999998 899999999999999999999999999999999875
No 13
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=1.9e-19 Score=82.20 Aligned_cols=71 Identities=31% Similarity=0.522 Sum_probs=63.9
Q ss_pred CccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 1 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+..|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 29 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 99 (115)
T 2l6b_A 29 LSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99 (115)
T ss_dssp TTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT-TTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 3567888889999999999999999999999998 8899999999999999999999999999999998874
No 14
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.79 E-value=8.2e-19 Score=88.35 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=65.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|++.++
T Consensus 42 ~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 42 KEMNDPSQPNEEGITALHNAICGANYSIVDFLI-TAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 357889999999999999999999999999998 8899999999999999999999999999999998864
No 15
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.79 E-value=1.3e-18 Score=83.52 Aligned_cols=70 Identities=24% Similarity=0.303 Sum_probs=57.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.+++++.++..|.||||+|+..++.+++++|+++++
T Consensus 63 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 132 (165)
T 3twr_A 63 QHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 132 (165)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH-hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 356778888888888888888888888888887 7888888888888888888888888888888888763
No 16
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.79 E-value=1.6e-18 Score=82.48 Aligned_cols=70 Identities=21% Similarity=0.328 Sum_probs=60.2
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 55 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 124 (153)
T 1awc_B 55 RAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124 (153)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 457788888888899999999999999998888 8888888888889999999999899999999888763
No 17
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.78 E-value=1.4e-18 Score=83.07 Aligned_cols=69 Identities=22% Similarity=0.352 Sum_probs=42.4
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+..++.+++++|+ +.+.+++.++..|.||||+|+..++.+++++|++.++
T Consensus 59 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 127 (162)
T 1ihb_A 59 RGANPDLKDRTGFAVIHDAARAGFLDTLQTLL-EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccC
Confidence 35555556666666666666666666666665 5566666666666666666666666666666665554
No 18
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=5.5e-19 Score=96.74 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=65.9
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 195 ~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 195 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHH-HTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 468999999999999999999999999999998 8999999999999999999999999999999999875
No 19
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.78 E-value=8.8e-19 Score=90.11 Aligned_cols=70 Identities=21% Similarity=0.307 Sum_probs=47.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLE-AGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
+|+++|.+|..|.||||+|+..++.+++++|+ . .|++++.++..|.||||+|+..|+.+++++|+++..+
T Consensus 205 ~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll-~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~i 275 (276)
T 4hbd_A 205 CEADVNVQDDDGSTALMCACEHGHKEIAGLLL-AVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNI 275 (276)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-TSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-hcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccCC
Confidence 46666666666677777777777766666666 4 6666666666667777777766677777766665544
No 20
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.78 E-value=1.9e-18 Score=82.27 Aligned_cols=68 Identities=34% Similarity=0.454 Sum_probs=59.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|++.
T Consensus 56 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 56 KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 357888888888999999999999999999888 88888888888899999999999999999998876
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.78 E-value=1.7e-18 Score=82.78 Aligned_cols=70 Identities=29% Similarity=0.386 Sum_probs=64.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS-LYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|+ ..++. .+.++..|.||||+|+..++.+++++|+++|+
T Consensus 91 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 91 EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV-KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 468899999999999999999999999999998 77776 58899999999999999999999999999986
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.78 E-value=2.4e-18 Score=83.59 Aligned_cols=69 Identities=23% Similarity=0.257 Sum_probs=48.0
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 61 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 129 (179)
T 3f6q_A 61 RGARINVMNRGDDTPLHLAASHGHRDIVQKLL-QYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA 129 (179)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45666666667777777777777777777776 6677777777777777777777777777777776653
No 23
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=2.8e-18 Score=83.75 Aligned_cols=68 Identities=22% Similarity=0.287 Sum_probs=63.8
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.+++..+..|.||||+|+..++.+++++|+ ..|++++.++ ..|.||||+|+..++.+++++|+++++
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 134 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA 134 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC
Confidence 7789999999999999999999999999998 8999999888 889999999999999999999999764
No 24
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=2.1e-18 Score=79.37 Aligned_cols=67 Identities=39% Similarity=0.602 Sum_probs=36.8
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||+|+|+..++.+++++|+ ..+.+++.++..|.||+++|+..++.+++++|+++|
T Consensus 58 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 58 GADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCcHHHHHHHcChHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 4445555555555555555555555555554 555555555555555555555555555555555544
No 25
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=3.8e-18 Score=86.51 Aligned_cols=68 Identities=22% Similarity=0.287 Sum_probs=64.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++++|..+..|.||||+|+..|+.+++++|+ ..|++++.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 67 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 135 (244)
T 3ui2_A 67 DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA 135 (244)
T ss_dssp TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 7889999999999999999999999999998 8999999888 889999999999999999999999864
No 26
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=2.5e-18 Score=78.22 Aligned_cols=64 Identities=30% Similarity=0.422 Sum_probs=38.6
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l 67 (76)
.|++++.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|
T Consensus 46 ~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 46 NGADVAAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 34555555666666666666666666666665 55666666666666666666666666665554
No 27
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=3.7e-18 Score=75.51 Aligned_cols=59 Identities=44% Similarity=0.680 Sum_probs=54.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 59 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4789999999999999999998 8999999999999999999999999999999999874
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.77 E-value=1.4e-18 Score=90.97 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=60.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|+++|.++..|.||||+|+..++.++++.|+...+.+++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 227 ~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 297 (337)
T 4g8k_A 227 DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 297 (337)
T ss_dssp HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45788888888889999999999999888888744578888888889999999999999999999888874
No 29
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=1.8e-18 Score=86.35 Aligned_cols=70 Identities=23% Similarity=0.303 Sum_probs=64.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEA-GGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++.++..|.||||+|+..++.+++++|+ .. ++.++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 94 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 164 (222)
T 3ehr_A 94 DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF-TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164 (222)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHT-TSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-cCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 357889999999999999999999999999998 66 99999999999999999999999999999998764
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.77 E-value=4.9e-18 Score=81.97 Aligned_cols=68 Identities=15% Similarity=0.255 Sum_probs=39.2
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|++++..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|++.+
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 58 WGADPHILAKERESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34555555555555665555555555555555 555555555555556666666555666665555544
No 31
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.76 E-value=4.9e-19 Score=82.94 Aligned_cols=68 Identities=21% Similarity=0.227 Sum_probs=53.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD-GMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+. ++.+++++|+ +.+++++.++.. |.||||+|+..++.+++++|+++++
T Consensus 34 ~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 102 (136)
T 1d9s_A 34 AGADPNALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA 102 (136)
T ss_dssp TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCC
T ss_pred cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 467777777778888888887 8888888877 777788888877 7888888888888888888887763
No 32
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.76 E-value=7.5e-18 Score=81.26 Aligned_cols=67 Identities=28% Similarity=0.458 Sum_probs=32.9
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|++++
T Consensus 70 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 136 (169)
T 2y1l_E 70 GADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3444444444455555555555555555444 444444444444555555555555555555554443
No 33
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.76 E-value=1.5e-18 Score=90.40 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=62.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|+++|.+|..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 214 ~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 214 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 357889999999999999999999999999998 889999999999999999999999999999998765
No 34
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.76 E-value=6.1e-18 Score=82.87 Aligned_cols=68 Identities=22% Similarity=0.237 Sum_probs=41.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++++
T Consensus 90 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (192)
T 2rfm_A 90 KGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157 (192)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 34555555556666666666666666666665 556666666666666666666666666666666554
No 35
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.76 E-value=1.4e-17 Score=78.01 Aligned_cols=67 Identities=19% Similarity=0.377 Sum_probs=60.4
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|+|+ ..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5677 67889999999999999999999998 8999999999999999999999999999999999864
No 36
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.76 E-value=5.4e-18 Score=86.61 Aligned_cols=69 Identities=22% Similarity=0.219 Sum_probs=52.6
Q ss_pred cccCcccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDN-DVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+.. |.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 180 ~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 249 (282)
T 1oy3_D 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249 (282)
T ss_dssp HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCC
Confidence 46677776643 778888888888888888777 7777777777778888888888888888888877764
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.76 E-value=7e-18 Score=86.97 Aligned_cols=70 Identities=26% Similarity=0.407 Sum_probs=65.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++..+..|.||||+|+..|+.+++++|+ ..|++++..+..|.||||+|+..|+.+++++|+++++
T Consensus 61 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 61 ERGADINYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 357889999999999999999999999999998 8999999999999999999999999999999999864
No 38
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.75 E-value=9e-18 Score=80.99 Aligned_cols=69 Identities=22% Similarity=0.282 Sum_probs=64.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||+++|+..++.+++++|++.|
T Consensus 101 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 101 KNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL-KNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 467889999999999999999999999999998 899999999999999999999999999999999875
No 39
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.75 E-value=9.9e-18 Score=80.57 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=38.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|++++
T Consensus 59 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 59 GADPQLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4555555555555555555555555555555 555555555555555555555555555555555544
No 40
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.75 E-value=8.5e-18 Score=85.32 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=56.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 145 ~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 356777888888888888888888888888887 7788888888888888888888888888888888764
No 41
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.75 E-value=9.6e-18 Score=87.64 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=66.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 235 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 235 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLH-KHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 357889999999999999999999999999998 9999999999999999999999999999999999875
No 42
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.75 E-value=8e-18 Score=81.21 Aligned_cols=69 Identities=22% Similarity=0.324 Sum_probs=65.1
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||+|+|+..++.+++++|++++
T Consensus 90 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 90 ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALL-ARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 468899999999999999999999999999998 899999999999999999999999999999998865
No 43
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.74 E-value=1.6e-17 Score=79.08 Aligned_cols=67 Identities=27% Similarity=0.398 Sum_probs=62.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.+|++++.++..|.||||+|+..++.+++++|+ .. ++++.++..|.||+|+|+..++.+++++|+++
T Consensus 89 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 89 EHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHH-hc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 468899999999999999999999999999998 66 88999999999999999999999999999875
No 44
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.74 E-value=2.1e-17 Score=75.97 Aligned_cols=70 Identities=39% Similarity=0.577 Sum_probs=64.8
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++..+..|.+|||+|+..++.+++++|+ ..+..++.++..|.||||+|+..++.+++++|++++.
T Consensus 23 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 23 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 357788889999999999999999999999998 8999999999999999999999999999999999764
No 45
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.74 E-value=9.7e-18 Score=82.15 Aligned_cols=69 Identities=22% Similarity=0.289 Sum_probs=65.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||+|+|+..++.+++++|++.+
T Consensus 122 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 122 EHGANVNDRNLEGETPLIVASKYGRSEIVKKLL-ELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 468899999999999999999999999999998 889999999999999999999999999999998864
No 46
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=84.25 Aligned_cols=70 Identities=23% Similarity=0.358 Sum_probs=62.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|++++..+..|.||||+|+..|+.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|++.++
T Consensus 24 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 24 SQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 357888888999999999999999999999998 8899999999999999999999999999999998764
No 47
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.74 E-value=5.4e-17 Score=78.83 Aligned_cols=68 Identities=25% Similarity=0.359 Sum_probs=64.0
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.+++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKA 96 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5678889999999999999999999999998 8999999999999999999999999999999999864
No 48
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=1.2e-17 Score=91.56 Aligned_cols=70 Identities=24% Similarity=0.367 Sum_probs=64.0
Q ss_pred ccccCcccC------CCCCCcHHHHHHH---cCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQ------MDNDVTPVYLAAQ---EGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..|+++|.. +..|.||||+|+. .++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 153 ~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 153 ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC
T ss_pred hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 357777766 7889999999977 89999999998 8999999999999999999999999999999999875
No 49
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.73 E-value=3.6e-17 Score=81.43 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=33.1
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|++++
T Consensus 115 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 181 (223)
T 2f8y_A 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181 (223)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 4444444444555555555555555555544 444444444444555555555555555555554443
No 50
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.73 E-value=3.7e-17 Score=77.71 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=61.7
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l 67 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||+|+|+..|+.+++++|
T Consensus 88 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLI-KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 468899999999999999999999999999998 88999999999999999999999999999987
No 51
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.73 E-value=3.3e-17 Score=84.29 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=61.8
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.|.+.+..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll-~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 238 (276)
T 4hbd_A 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALL-ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAV 238 (276)
T ss_dssp HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTS
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 35566777888999999999999999999998 89999999999999999999999999999999983
No 52
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.73 E-value=2.8e-17 Score=87.63 Aligned_cols=69 Identities=22% Similarity=0.295 Sum_probs=50.6
Q ss_pred cccCcccCC--CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQM--DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|+++|..+ ..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 222 ~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Ga 292 (368)
T 3jue_A 222 HGADVNWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292 (368)
T ss_dssp TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcC
Confidence 466676666 66777777777777777777776 6777777777777777777777777777777777653
No 53
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.73 E-value=3.7e-17 Score=81.39 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=59.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.+|++++.++..|.||+|+|+..++.+++++|+ +.|++++.++..|.||+++|+..++.+++++|+++++.
T Consensus 146 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 357788888888888888888888888888887 78888888888888888888888888888888888764
No 54
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.73 E-value=2.6e-17 Score=83.99 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=62.5
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++.++..|.||||+|+..++.+++++|++..+.+++.++..|.||||+|+..++.+++++|+++|+
T Consensus 207 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 207 DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277 (285)
T ss_dssp HTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSS
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Confidence 35788888888999999999999999999999833888999999999999999999999999999998875
No 55
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.73 E-value=3.4e-17 Score=84.48 Aligned_cols=65 Identities=25% Similarity=0.379 Sum_probs=60.0
Q ss_pred cccCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 7 ANSQMDNDVTPVYLAAQE---GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 7 ~~~~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++..+..|.||||+|+.. ++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 229 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 445578899999999999 8999999998 8999999999999999999999999999999999875
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.73 E-value=2.9e-17 Score=78.92 Aligned_cols=69 Identities=22% Similarity=0.305 Sum_probs=64.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+.+++..+..|.||||+|+..++.+++++|+ +.+++++..+..|.||||+|+..++.+++++|++.++
T Consensus 25 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 25 QENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 46788889999999999999999999999998 8899999999999999999999999999999998753
No 57
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.72 E-value=3.5e-17 Score=81.64 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=37.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 68 (76)
+|++++.++..|.||||+|+..++.+++++|+ ..+ .+++.++..|.||||+|+..++.+++++|+
T Consensus 129 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLC-GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34555555555556666666555566555555 444 555555555666666666666666665555
No 58
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.72 E-value=6.7e-17 Score=81.10 Aligned_cols=70 Identities=16% Similarity=0.297 Sum_probs=59.0
Q ss_pred ccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+ ..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 137 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 207 (241)
T 1k1a_A 137 ERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL-QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA 207 (241)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCcccccccCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 3567777777 67888999998888888888887 7888888888888999999998889999988888764
No 59
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.72 E-value=7.1e-18 Score=84.75 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=34.5
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 8 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+..+..|.||||+|+..++.+++++|+ ..|++++.++. .|.||||+|+..++.+++++|+++|
T Consensus 111 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 111 KATNYNGHTCLHLASIHGYLGIVELLV-SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp GCCCTTCCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 444445555555555555555555555 55555555554 5555555555555555555555544
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.72 E-value=1.2e-16 Score=83.49 Aligned_cols=67 Identities=19% Similarity=0.410 Sum_probs=43.3
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+.+++..+..|.||||+|+..|+.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|++++
T Consensus 48 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 114 (351)
T 3utm_A 48 NVNCHASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 114 (351)
T ss_dssp TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCC
Confidence 4555666666666666666666666666666 566666666666666666666666666666666654
No 61
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.72 E-value=6.6e-17 Score=80.83 Aligned_cols=69 Identities=20% Similarity=0.278 Sum_probs=52.2
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 128 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILL-FYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196 (231)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 46667777777777777777777777777776 6777777777777788888877777777777777653
No 62
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.72 E-value=1.8e-16 Score=76.06 Aligned_cols=68 Identities=21% Similarity=0.411 Sum_probs=62.6
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+.+++..+..|.||||+|+..++.+++++|+ +.+.+++.++..|.||||+|+..++.+++++|++.++
T Consensus 32 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 99 (165)
T 3twr_A 32 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGA 99 (165)
T ss_dssp TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Confidence 4566777788999999999999999999998 8999999999999999999999999999999999864
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.72 E-value=5.6e-18 Score=80.88 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=62.4
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCc-HHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMA-PIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~t-pl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+ .++.+++++|+ ..|++++.++..|.| |||+|+..++.+++++|+++++
T Consensus 33 ~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga 102 (156)
T 1bi7_B 33 EAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA 102 (156)
T ss_dssp TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCC
Confidence 467889999999999999985 89999999998 889999999999998 9999999999999999998763
No 64
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.71 E-value=3.7e-17 Score=87.92 Aligned_cols=69 Identities=23% Similarity=0.396 Sum_probs=54.4
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 300 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 300 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLL-QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368 (437)
T ss_dssp HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC
Confidence 46677777777888888888888888888887 7788888888888888888888888888888887764
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.71 E-value=6.9e-17 Score=79.38 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=41.0
Q ss_pred cCcccCCCCCCcHHHHHHHcCC-----HHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGH-----LEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
++++.++..|.||||+|+..+. .+++++|+ +.|++++.++..|.||+|+|+..++.+++++|+++|
T Consensus 131 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 131 EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM-ENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHH-HCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 5555666666666666666555 56666665 566666666666666666666666666666666553
No 66
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.71 E-value=1.8e-16 Score=79.08 Aligned_cols=69 Identities=28% Similarity=0.360 Sum_probs=61.0
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 74 (76)
.+++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|++.+..+
T Consensus 98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166 (228)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred cccccCCcCCCCHHHHHHHcCCHhHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 778888888999999999999999999998 889999999999999999999999999999999887443
No 67
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.71 E-value=1.7e-16 Score=77.98 Aligned_cols=67 Identities=18% Similarity=0.294 Sum_probs=51.5
Q ss_pred cCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..++.+++++|++.+.
T Consensus 30 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 96 (201)
T 3hra_A 30 YQVDEVDTEGNTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHAT 96 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 467777777888888888888888888887 7777777777778888888888888888887775443
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=7.7e-17 Score=83.13 Aligned_cols=68 Identities=22% Similarity=0.349 Sum_probs=44.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.|++++..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|++.+
T Consensus 81 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (285)
T 3d9h_A 81 QGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148 (285)
T ss_dssp TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCC
Confidence 35566666666666666666666666666665 566666666666666666666666666666666654
No 69
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.71 E-value=1e-16 Score=82.37 Aligned_cols=68 Identities=22% Similarity=0.400 Sum_probs=41.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
..|+++|..+..|.||||+|+..|+.+++++|+ ..+++++.++..|.||+++++..++.+++++|++.
T Consensus 74 ~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 141 (269)
T 4b93_B 74 ASGLGVNVTSQDGSSPLHVAALHGRADLIPLLL-KHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS 141 (269)
T ss_dssp -CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-hcCCCcCccCCCCCCccccccccChHHHHHHHHHC
Confidence 457788888888888888888888877777776 55554444444444444444444444444444433
No 70
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.71 E-value=4.4e-17 Score=81.58 Aligned_cols=68 Identities=13% Similarity=0.165 Sum_probs=42.4
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHH----HHHHHhcCCCc------cccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVL----KFLVLEAGGSL------YVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~l~~~~~~~~------~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|++++.+|..|.||||+|+..++.+++ ++|+ ..++.. +.++..|.||||+|+..|+.+++++|++++
T Consensus 143 ~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll-~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 143 HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLL-SYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHH-HTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHH-hcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 4566666666666666666666666655 5555 555554 355666666666666666666666666654
No 71
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.70 E-value=6.9e-17 Score=84.13 Aligned_cols=69 Identities=25% Similarity=0.353 Sum_probs=62.7
Q ss_pred cccCccc------CCCCCCcHHHHHHHc---CCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANS------QMDNDVTPVYLAAQE---GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~------~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.|++++. .+..|.||||+|+.. ++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 173 ~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 250 (301)
T 2b0o_E 173 NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250 (301)
T ss_dssp TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4667766 578899999999997 8999999998 8899999999999999999999999999999999874
No 72
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.70 E-value=6.6e-17 Score=83.43 Aligned_cols=71 Identities=17% Similarity=0.240 Sum_probs=57.3
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCC-CcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDG-MAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g-~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..| .||||+|+..|+.+++++|++.++.
T Consensus 83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154 (285)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT
T ss_pred HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Confidence 357778888888888888888888888888887 7788888888777 7888888888888888888887653
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.70 E-value=2.3e-17 Score=84.37 Aligned_cols=71 Identities=14% Similarity=0.214 Sum_probs=64.2
Q ss_pred cccCcccCCCCCCcHHHHHHHcCC---------HHHHHHHHHhcCCCcc-------ccCCCCCcHHHHHHHcCCHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGH---------LEVLKFLVLEAGGSLY-------VRAKDGMAPIHAAAQMGCLSCLKW 66 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~~~~~~~-------~~~~~g~tpl~~a~~~~~~~~~~~ 66 (76)
+|++++.++..|.||||+|+..++ .+++++|+ ..|++++ .++..|.||||+|+..|+.+++++
T Consensus 173 ~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll-~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 173 QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL-ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH-HHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH-HhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 689999999999999999999888 78899998 8888775 488999999999999999999999
Q ss_pred HHhCCCcc
Q psy14142 67 MEHRPAVK 74 (76)
Q Consensus 67 l~~~~~~~ 74 (76)
|+++|+.+
T Consensus 252 Ll~~ga~d 259 (273)
T 2pnn_A 252 ILQREIHE 259 (273)
T ss_dssp HHHHHTC-
T ss_pred HHHCCCCC
Confidence 99998854
No 74
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.70 E-value=1.3e-16 Score=79.99 Aligned_cols=69 Identities=20% Similarity=0.255 Sum_probs=51.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+++++
T Consensus 133 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 201 (237)
T 3b7b_A 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILL-AAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS 201 (237)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC
Confidence 46667777777777777777777777777776 7777777777777777777777777777777777653
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.70 E-value=3.4e-17 Score=86.50 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=44.7
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 7 ~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|+++++
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDVAMRFV-EMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 6666666677777777777777777666 6666666666677777777777777777777766543
No 76
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.70 E-value=2.8e-17 Score=83.38 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=64.1
Q ss_pred cccCcccCCCCCCcHHHHHHH--cCCHH-------HHHHHHHhcCCCc-------cccCCCCCcHHHHHHHcCCHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQ--EGHLE-------VLKFLVLEAGGSL-------YVRAKDGMAPIHAAAQMGCLSCLKW 66 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~l~~~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~~~ 66 (76)
+|++++.++..|.||||+|+. .++.+ ++++|+ ..|+++ +.++..|.||||+|+..|+.+++++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll-~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL-QMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH-HHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH-HcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 789999999999999999999 78888 999998 888888 8899999999999999999999999
Q ss_pred HHhCCC
Q psy14142 67 MEHRPA 72 (76)
Q Consensus 67 l~~~~~ 72 (76)
|++++.
T Consensus 240 Ll~~g~ 245 (256)
T 2etb_A 240 ILQREF 245 (256)
T ss_dssp HHHHHH
T ss_pred HHhCCC
Confidence 998764
No 77
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.70 E-value=1.7e-16 Score=84.38 Aligned_cols=68 Identities=22% Similarity=0.322 Sum_probs=57.9
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+++++..+..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|+++++
T Consensus 303 ~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 303 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI-QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCccCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 3788888888888888888888888888887 7888888888888888888888888888888888765
No 78
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.70 E-value=2.7e-16 Score=80.30 Aligned_cols=69 Identities=22% Similarity=0.348 Sum_probs=63.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD-GMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+++++..+..|.||||+|+..++.+++++|+ ..|+.++.++.. |.||||+|+..++.+++++|+++|+
T Consensus 147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 216 (282)
T 1oy3_D 147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216 (282)
T ss_dssp GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 35678888999999999999999999999998 899999988854 9999999999999999999999864
No 79
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.70 E-value=2.2e-16 Score=79.02 Aligned_cols=68 Identities=21% Similarity=0.171 Sum_probs=61.8
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSL-----YVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~-----~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
|++++.++..|.||||+|+..++.+++++|+ +.++.. +..+..|.||||+|+..|+.+++++|++.++
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 99 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALYDNLEAAMVLM-EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGA 99 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCC
Confidence 7899999999999999999999999999998 777765 5567789999999999999999999999864
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.70 E-value=4.8e-17 Score=85.92 Aligned_cols=70 Identities=19% Similarity=0.148 Sum_probs=60.1
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCC-----ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS-----LYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~-----~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ ..++. ++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 161 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 235 (364)
T 3ljn_A 161 QLGASPTAKDKADETPLMRAMEFRNREALDLMM-DTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI 235 (364)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-hcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 357888888888999999999999999999988 77777 88888889999999999999999999988764
No 81
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=1.1e-16 Score=72.76 Aligned_cols=65 Identities=23% Similarity=0.345 Sum_probs=57.0
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 7 ~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
....+.+|.++||+|+..++.+++++|+ ..+++++.++..|.||||+|+..++.+++++|+++++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3455778999999999999999999998 8899999999999999999999999999999999864
No 82
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.70 E-value=6.5e-17 Score=86.24 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=65.0
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|+++|..|..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|+..+
T Consensus 256 ~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL-~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 256 QNGANVNQADSAGRGPLHHATILGHTGLACLFL-KRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 468999999999999999999999999999998 899999999999999999999999999999998754
No 83
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.69 E-value=6.5e-17 Score=82.04 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=62.1
Q ss_pred ccccCcccCCCC-------------CCcHHHHHHHcCCHHHHHHHHHh---cCCCccccCCCCCcHHHHHHH--cCCHH-
Q psy14142 2 TYEMSANSQMDN-------------DVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQ--MGCLS- 62 (76)
Q Consensus 2 ~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~l~~~---~~~~~~~~~~~g~tpl~~a~~--~~~~~- 62 (76)
.+|++++..+.. |.||||+|+..++.+++++|+ . .|++++.++..|.||||+|+. .++.+
T Consensus 111 ~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~ 189 (256)
T 2etb_A 111 ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL-ENPHQPASLEATDSLGNTVLHALVMIADNSPEN 189 (256)
T ss_dssp HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH-hccccCCCcCccCCCCCCHHHHHHHcccCCchh
Confidence 357788887775 999999999999999999998 7 899999999999999999998 77888
Q ss_pred ------HHHHHHhCC
Q psy14142 63 ------CLKWMEHRP 71 (76)
Q Consensus 63 ------~~~~l~~~~ 71 (76)
++++|+++|
T Consensus 190 ~~~~~~iv~~Ll~~g 204 (256)
T 2etb_A 190 SALVIHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcC
Confidence 999998865
No 84
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.69 E-value=3.7e-17 Score=83.02 Aligned_cols=69 Identities=16% Similarity=0.203 Sum_probs=63.1
Q ss_pred cccCcccCCCCCCcHHHHHHHcCC---------HHHHHHHHHhcCCCc-------cccCCCCCcHHHHHHHcCCHHHHHH
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGH---------LEVLKFLVLEAGGSL-------YVRAKDGMAPIHAAAQMGCLSCLKW 66 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~~~ 66 (76)
+|++++.++..|.||||+|+..++ .+++++|+ ..|+++ +.++..|.||||+|+..|+.+++++
T Consensus 165 ~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll-~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 165 KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLL-IKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHH-HHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHH-HhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 789999999999999999998887 68999998 888887 6789999999999999999999999
Q ss_pred HHhCCC
Q psy14142 67 MEHRPA 72 (76)
Q Consensus 67 l~~~~~ 72 (76)
|++++.
T Consensus 244 Ll~~g~ 249 (260)
T 3jxi_A 244 IIRREI 249 (260)
T ss_dssp HHHHHH
T ss_pred HHHhCC
Confidence 998764
No 85
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.69 E-value=3.4e-16 Score=78.51 Aligned_cols=67 Identities=24% Similarity=0.434 Sum_probs=35.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..|.||||+|+..++.+++++|+ +.|+.++.++..|.||||+|+..++.+++++|++.+
T Consensus 34 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 100 (237)
T 3b7b_A 34 GANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 4444555555555555555555555555554 455555555555555555555555555555555544
No 86
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.69 E-value=7.7e-17 Score=81.87 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=61.8
Q ss_pred ccccCcccCC--------------CCCCcHHHHHHHcCCHHHHHHHHHh---cCCCccccCCCCCcHHHHHHHcCC----
Q psy14142 2 TYEMSANSQM--------------DNDVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQMGC---- 60 (76)
Q Consensus 2 ~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~l~~~---~~~~~~~~~~~g~tpl~~a~~~~~---- 60 (76)
.+|++++..+ ..|.||||+|+..++.+++++|+ + .|++++.++..|.||||+|+..++
T Consensus 114 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~ 192 (260)
T 3jxi_A 114 EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT-ENGHKQADLRRQDSRGNTVLHALVAIADNTRE 192 (260)
T ss_dssp HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHH
T ss_pred hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH-hccccCCCCcccCCCCCcHHHHHHHhccCchh
Confidence 3577777777 67999999999999999999998 7 899999999999999999998887
Q ss_pred -----HHHHHHHHhCC
Q psy14142 61 -----LSCLKWMEHRP 71 (76)
Q Consensus 61 -----~~~~~~l~~~~ 71 (76)
.+++++|++.|
T Consensus 193 ~~~~~~~~v~~Ll~~g 208 (260)
T 3jxi_A 193 NTKFVTKMYDLLLIKC 208 (260)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 68999998875
No 87
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.69 E-value=1.7e-16 Score=80.56 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=63.9
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+|++++.++..|.||||+|+..++.+++++|+ +.|++++.++..|.||+++|+..|+.+++++|....
T Consensus 178 ~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 178 KNGANKDMQNNREETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 468899999999999999999999999999998 999999999999999999999999999999998754
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.69 E-value=5.4e-17 Score=85.09 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=60.0
Q ss_pred ccccCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHhC
Q psy14142 2 TYEMSANS-QMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC---LSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~---~~~~~~l~~~ 70 (76)
..|+++|. .+..|.||||+|+..|+.+++++|+ +.|++++.++..|.||||+|+..|+ .+++..|++.
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 45789999 8999999999999999999999998 8999999999999999999999988 4555555544
No 89
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.69 E-value=1.3e-16 Score=85.79 Aligned_cols=67 Identities=31% Similarity=0.463 Sum_probs=32.2
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|++++..+..+.||||+|+..|+.+++++|+ +.++.++.++..|.||||+|+..|+.+++++|++++
T Consensus 37 g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 103 (437)
T 1n11_A 37 GASPNVSNVKVETPLHMAARAGHTEVAKYLL-QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103 (437)
T ss_dssp TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHH-HHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence 3444444444444444444444444444444 444444444444455555555555555555444443
No 90
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.68 E-value=2.1e-16 Score=80.57 Aligned_cols=69 Identities=23% Similarity=0.312 Sum_probs=54.9
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.|++++. +..|.||||+|+..++.+++++|+++|+
T Consensus 122 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ga 190 (261)
T 2xai_A 122 AYGGNIDHKISHLGTPLYLACENQQRACVKKLL-ESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGA 190 (261)
T ss_dssp HTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH-HHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH-HcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCC
Confidence 356777888888888888888888888888887 77777774 6778888888888888888888888764
No 91
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.68 E-value=3.9e-16 Score=78.05 Aligned_cols=66 Identities=23% Similarity=0.310 Sum_probs=29.1
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
|++++..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|++.
T Consensus 63 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 128 (231)
T 3aji_A 63 GVPVNDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128 (231)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3344444444444444444444444444444 44444444444444444444444444444444443
No 92
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.68 E-value=1.1e-16 Score=81.89 Aligned_cols=69 Identities=19% Similarity=0.207 Sum_probs=61.7
Q ss_pred ccccCcccCCC--------------CCCcHHHHHHHcCCHHHHHHHHHh---cCCCccccCCCCCcHHHHHHHcCC----
Q psy14142 2 TYEMSANSQMD--------------NDVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQMGC---- 60 (76)
Q Consensus 2 ~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~l~~~---~~~~~~~~~~~g~tpl~~a~~~~~---- 60 (76)
.+|++++..+. .|.||||+|+..++.+++++|+ + .|++++.++..|.||||+|+..++
T Consensus 122 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~ 200 (273)
T 2pnn_A 122 ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL-QNSWQPADISARDSVGNTVLHALVEVADNTVD 200 (273)
T ss_dssp HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH-hcccCCCCceeeCCCCCcHHHHHHHccCcchh
Confidence 35777777775 7999999999999999999998 7 899999999999999999999888
Q ss_pred -----HHHHHHHHhCC
Q psy14142 61 -----LSCLKWMEHRP 71 (76)
Q Consensus 61 -----~~~~~~l~~~~ 71 (76)
.+++++|++.+
T Consensus 201 ~~~~~~~~v~~Ll~~g 216 (273)
T 2pnn_A 201 NTKFVTSMYNEILILG 216 (273)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 78999998764
No 93
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.68 E-value=1.6e-16 Score=84.51 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=64.9
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
..|+++|..|..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|++.+
T Consensus 154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 222 (373)
T 2fo1_E 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLM-KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNST 222 (373)
T ss_dssp HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSH
T ss_pred hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHH-HCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcC
Confidence 468899999999999999999999999999998 899999999999999999999999999999999865
No 94
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.68 E-value=1.6e-16 Score=72.41 Aligned_cols=63 Identities=33% Similarity=0.453 Sum_probs=59.0
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|..|.|+||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 46788999999999999999999998 8899999999999999999999999999999999864
No 95
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.67 E-value=9e-16 Score=77.09 Aligned_cols=65 Identities=28% Similarity=0.360 Sum_probs=33.8
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 6 ~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+++..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 101 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALL-GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC 101 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44445555555555555555555555554 455555555555555555555555555555555443
No 96
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.67 E-value=5.9e-16 Score=81.09 Aligned_cols=64 Identities=17% Similarity=0.096 Sum_probs=59.0
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+++++.+|..|.||||+|+..|+.+++++|+ +.|++++.+ +|||+|+..++.+++++|+++|+
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll-~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLC-KRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH-TTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcC
Confidence 47899999999999999999999999999998 899887653 59999999999999999999985
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.67 E-value=1.7e-17 Score=81.46 Aligned_cols=66 Identities=15% Similarity=0.087 Sum_probs=39.8
Q ss_pred cccCcccCCCCCCcHHHHHHHcCC------HHHHHHHHHhcCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHh
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGH------LEVLKFLVLEAGGSLYVRAKDGM-APIHAAAQMG-----CLSCLKWMEH 69 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~------~~~~~~l~~~~~~~~~~~~~~g~-tpl~~a~~~~-----~~~~~~~l~~ 69 (76)
+|+++|.++..|+||||+|+..++ .+++++|+ ..|++++.++..|. ||||+|+..+ +.+++++|++
T Consensus 64 ~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll-~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL-EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH-HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHH-HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 466666666666666666666554 34566665 56666666666666 6666666532 2345566665
No 98
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=6.1e-16 Score=79.80 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=52.3
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+|++++.++..|.||||+|+..++.+++++|+ +.|++++. +..|.||||+|+..++.+++++|+++|+
T Consensus 179 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 246 (285)
T 3d9h_A 179 YGGNIDHKISHLGTPLYLACENQQRACVKKLL-ESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGA 246 (285)
T ss_dssp TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH-HTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 56777777777888888888888888888877 77777764 6677788888888888888888877754
No 99
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.66 E-value=9e-16 Score=78.30 Aligned_cols=67 Identities=25% Similarity=0.346 Sum_probs=35.2
Q ss_pred ccCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 4 EMSANSQ-MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 4 ~~~~~~~-~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
|.+++.. +..|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|++++
T Consensus 28 g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 28 GANVNFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3444444 344555555555555555555554 455555555555555555555555555555555543
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.66 E-value=2e-17 Score=83.33 Aligned_cols=69 Identities=20% Similarity=0.308 Sum_probs=64.1
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHH--HHcCCHHHHHHHHhCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAA--AQMGCLSCLKWMEHRP 71 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a--~~~~~~~~~~~l~~~~ 71 (76)
.+|++++..+..|.||||+|+..++.+++++|+ +.|++++.++ ..|.||||+| +..++.+++++|++.|
T Consensus 75 ~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 75 TAGANVNSPDSHGWTPLHCAASCNDTVICMALV-QHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE 146 (229)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC
Confidence 468899999999999999999999999999998 8999999986 6999999999 8999999999999865
No 101
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.66 E-value=1.4e-16 Score=82.17 Aligned_cols=66 Identities=17% Similarity=0.125 Sum_probs=41.2
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
+|++++.. +|.||||+|+..++.+++++|+ +.|++++.++..|.||||+|+..|+.+++++|++++
T Consensus 53 ~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 53 AGALKNLL--ENEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp TTGGGSCC--TTCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCCCCC--CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 34455444 2566666666666666666665 566666666666666666666666666666666654
No 102
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.66 E-value=1.3e-15 Score=76.41 Aligned_cols=69 Identities=23% Similarity=0.254 Sum_probs=54.7
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+.+++..+..|.||||+|+..++.+++++|+ +.|+.++.++..|.||||+|+..++.+++++|++.+.
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45677777778888888888888888888887 7778877778888888888888888888888877653
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.66 E-value=6.4e-17 Score=80.76 Aligned_cols=69 Identities=23% Similarity=0.266 Sum_probs=58.9
Q ss_pred ccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 4 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
|++++.++..|.||||+|+..++.+++++|+ ..|++++.++..|.||+|+|+..++.++++.|+..++.
T Consensus 130 g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 130 NIELNQQNKLGDTALHAAAWKGYADIVQLLL-AKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 8899999999999999999999999999998 88999999999999999999999999999998887754
No 104
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.65 E-value=1.8e-15 Score=77.98 Aligned_cols=63 Identities=29% Similarity=0.392 Sum_probs=58.9
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 9 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
..+..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 256 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLI-QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Confidence 35678999999999999999999998 9999999999999999999999999999999999874
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.65 E-value=7.9e-16 Score=76.97 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=61.7
Q ss_pred cccCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCc
Q psy14142 3 YEMSANSQMD-NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73 (76)
Q Consensus 3 ~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 73 (76)
.+++++..+. .|.||||+|+..++.+++++|+ +.|++++.++..|.||+++|+..++.+++++|++.++.
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLL-EAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 5677887876 8899999999999999999998 88999999999999999999999999999999987653
No 106
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.64 E-value=5.6e-16 Score=78.24 Aligned_cols=69 Identities=12% Similarity=0.176 Sum_probs=55.2
Q ss_pred ccccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 2 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.+|++++. +..+.|+||+|+..|+.++++.|+ ..+++++.++..|.||||+|+..|+.+++++|+++++
T Consensus 26 ~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga 94 (239)
T 1ycs_B 26 AHGMRVKF-NPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV 94 (239)
T ss_dssp ------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred ccCCCccc-CchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45677764 356899999999999999999998 8999999999999999999999999999999999763
No 107
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.63 E-value=7e-17 Score=79.30 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=60.9
Q ss_pred ccccCcccCCCCCC-cHHHHHHHcCC-----HHHHHHHHHh-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14142 2 TYEMSANSQMDNDV-TPVYLAAQEGH-----LEVLKFLVLE-AGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70 (76)
Q Consensus 2 ~~~~~~~~~~~~~~-t~l~~a~~~~~-----~~~~~~l~~~-~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 70 (76)
.+|+++|.+|..|. ||||+|+..+. .+++++|+ . .|++++.++..|.||||+|+..++.+++++|..+
T Consensus 102 ~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll-~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 102 EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIF-SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHH-TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHH-HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 47899999999999 99999998543 45889998 7 9999999999999999999999999999998764
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.63 E-value=2.9e-15 Score=68.98 Aligned_cols=61 Identities=25% Similarity=0.287 Sum_probs=55.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 11 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
+..+.++||+|+..++.++++.++ ..+.+++.++..|.||||+|+..++.+++++|++.++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 64 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred ccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 456889999999999999999998 8999999999999999999999999999999999864
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.61 E-value=2.1e-15 Score=76.47 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=60.6
Q ss_pred ccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHH----------------HcCCHHHH
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA----------------QMGCLSCL 64 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~----------------~~~~~~~~ 64 (76)
.+|++++..+ ..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+ ..|+.+++
T Consensus 98 ~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 98 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV-ELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp HTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHH
T ss_pred HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHH
Confidence 4688999888 78999999999999999999998 889999999999999998887 56788888
Q ss_pred HHHHhC
Q psy14142 65 KWMEHR 70 (76)
Q Consensus 65 ~~l~~~ 70 (76)
++|++.
T Consensus 177 ~~L~~~ 182 (244)
T 3ui2_A 177 NVLEGQ 182 (244)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888764
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.61 E-value=2e-15 Score=73.64 Aligned_cols=56 Identities=21% Similarity=0.283 Sum_probs=51.3
Q ss_pred ccccCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHc
Q psy14142 2 TYEMSANSQM-DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQM 58 (76)
Q Consensus 2 ~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~g~tpl~~a~~~ 58 (76)
.+|++++..+ ..|.||||+|+..++.+++++|+ ..|++++.++..|.||||+|+..
T Consensus 97 ~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 97 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV-ELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHH-HcCCCCcCCCCCCCCHHHHHHHh
Confidence 4688998888 88999999999999999999998 88999999999999999998765
No 111
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.58 E-value=7e-15 Score=77.13 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=57.3
Q ss_pred cCcccCCCCCCcHHHHHHH----cCCHHHHHHHHHhcCC-----------------------------------------
Q psy14142 5 MSANSQMDNDVTPVYLAAQ----EGHLEVLKFLVLEAGG----------------------------------------- 39 (76)
Q Consensus 5 ~~~~~~~~~~~t~l~~a~~----~~~~~~~~~l~~~~~~----------------------------------------- 39 (76)
.+++.++..|.||||+|+. .++.+++++++ +.+.
T Consensus 192 ~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll-~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~ 270 (327)
T 1sw6_A 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYL-DILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 270 (327)
T ss_dssp GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHH-HHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred ccccCCCCCCCCHHHHHHHHccccccHHHHHHHH-HHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHH
Confidence 5678888899999999998 88999999887 4421
Q ss_pred ----CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14142 40 ----SLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPA 72 (76)
Q Consensus 40 ----~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 72 (76)
.++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 271 Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 271 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307 (327)
T ss_dssp HHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC
T ss_pred HHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 467788899999999999999999999999875
No 112
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.58 E-value=1.7e-14 Score=72.14 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=40.3
Q ss_pred cccCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 3 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.|++++..+..|.||||+|+..++.+++++|+ ..+....... ..|.||||+|+..++.+++++|++.+
T Consensus 31 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 99 (240)
T 3eu9_A 31 AGYDVRQPDKENVTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99 (240)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence 35556666666666666666666666666665 5555444333 33566666666666666666666554
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.41 E-value=6.3e-15 Score=78.85 Aligned_cols=57 Identities=28% Similarity=0.378 Sum_probs=29.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy14142 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGS---LYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71 (76)
Q Consensus 13 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~---~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 71 (76)
.+.+|||+|+..|+.+++++|+ ..|++ .+..+.. .||||+|+..|+.+++++|++++
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll-~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~g 186 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELA 186 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-hCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcC
Confidence 3445555555555555555555 44532 1111122 55555555555555555555554
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.34 E-value=3.4e-13 Score=72.22 Aligned_cols=56 Identities=25% Similarity=0.286 Sum_probs=37.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHH-HcCCHHHHHHHHhCC
Q psy14142 15 VTPVYLAAQEGHLEVLKFLVLEAGGSLYV--RAKDGMAPIHAAA-QMGCLSCLKWMEHRP 71 (76)
Q Consensus 15 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~--~~~~g~tpl~~a~-~~~~~~~~~~l~~~~ 71 (76)
.||||+|+..|+.+++++|+ ..|++++. .+..|.||||+|+ ..|+.+++++|++.+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll-~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLC-ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred CCHHHHHHHCCCHHHHHHHH-HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 66777777777777777666 66666555 5556667777777 777777777766643
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=57.21 E-value=7.6 Score=14.18 Aligned_cols=16 Identities=31% Similarity=0.409 Sum_probs=11.7
Q ss_pred HHHHHHcCCHHHHHHH
Q psy14142 18 VYLAAQEGHLEVLKFL 33 (76)
Q Consensus 18 l~~a~~~~~~~~~~~l 33 (76)
+..||..|..+.++.|
T Consensus 17 iyvA~seGd~etv~~L 32 (40)
T 1gp8_A 17 MDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 4567778888777766
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=40.25 E-value=54 Score=19.02 Aligned_cols=48 Identities=19% Similarity=0.264 Sum_probs=34.6
Q ss_pred HHHcCCHHHHHHHHHhcCCCcccc--------------CCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14142 21 AAQEGHLEVLKFLVLEAGGSLYVR--------------AKDGMAPIHAAAQMGCLSCLKWMEH 69 (76)
Q Consensus 21 a~~~~~~~~~~~l~~~~~~~~~~~--------------~~~g~tpl~~a~~~~~~~~~~~l~~ 69 (76)
....|....++..+ ..|+++.-+ -.-|.|-+|+|.+..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~-~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYK-SSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHH-TTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHH-hcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 34567777777766 565543321 2348899999999999999988875
Done!