RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14142
(76 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 48.8 bits (115), Expect = 4e-09
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ ++ N++ +P++ AAQ+GH +++ L L+ G S + DG P+ A ++G
Sbjct: 317 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL-LKNGASPNEVSSDGTTPLAIAKRLGY 375
Query: 61 LSCLKWME 68
+S ++
Sbjct: 376 ISVTDVLK 383
Score = 48.8 bits (115), Expect = 4e-09
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
N TP+++AA+ GH EV K+L L+ + +AKD P+H AA++G + +K +
Sbjct: 27 NVSNVKVETPLHMAARAGHTEVAKYL-LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 85
Query: 68 EHRPA 72
A
Sbjct: 86 LENNA 90
Score = 48.4 bits (114), Expect = 5e-09
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
TP+++A+ GHL ++K L L+ G S V P+H AA+ G K++
Sbjct: 2 TPLHVASFMGHLPIVKNL-LQRGASPNVSNVKVETPLHMAARAGHTEVAKYL 52
Score = 41.9 bits (97), Expect = 1e-06
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ E S TP+++AA+ G + V + L LE K+G+ P+H A
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELL-LERDAHPNAAGKNGLTPLHVAVHHNN 177
Query: 61 LSCLKWMEHRPA 72
L +K + R
Sbjct: 178 LDIVKLLLPRGG 189
Score = 29.2 bits (64), Expect = 0.035
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFL--VLEAGGSLYVRAKDGM 49
N + TP+ +A + G++ V L V + + V K M
Sbjct: 357 NEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400
Score = 28.8 bits (63), Expect = 0.040
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
N++ +D TP++ AA+ GH ++K L LE + + G P+H AA+ G + + +
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLL-LENNANPNLATTAGHTPLHIAAREGHVETVLAL 118
Query: 68 EHRPA 72
+ A
Sbjct: 119 LEKEA 123
Score = 28.0 bits (61), Expect = 0.092
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
+S N TP+++AA++ +EV + L L+ GGS + G+ P+H AAQ G + +
Sbjct: 192 HSPAWNGYTPLHIAAKQNQVEVARSL-LQYGGSANAESVQGVTPLHLAAQEGHAEMVALL 250
Query: 68 EH 69
Sbjct: 251 LS 252
Score = 28.0 bits (61), Expect = 0.093
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ Y SAN++ VTP++LAAQEGH E++ L+ + + K G+ P+H AQ G
Sbjct: 218 LQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL-SKQANGNLGNKSGLTPLHLVAQEGH 276
Query: 61 LSCLKWMEHRPA 72
+ +
Sbjct: 277 VPVADVLIKHGV 288
Score = 23.8 bits (50), Expect = 2.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 49 MAPIHAAAQMGCLSCLKWM 67
+ P+H A+ MG L +K +
Sbjct: 1 LTPLHVASFMGHLPIVKNL 19
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 47.6 bits (112), Expect = 1e-08
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Query: 7 ANSQMDNDVTPVYLAAQEGHLEVLKFL--VLEAGGSLYVRAKDGMAPIHAAAQMGCLSCL 64
A+ + ++AA G L L +L + + V + AA+ G L L
Sbjct: 83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 142
Query: 65 KWMEHRPA 72
+
Sbjct: 143 NRLCELAP 150
Score = 41.4 bits (96), Expect = 1e-06
Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD--GMAPIHAAAQMGCLSCLK 65
+ LAA+ GHL VL L E + + AA+ G L L
Sbjct: 120 KVIQAENYQAFRLAAENGHLHVLNRL-CELAPTEIMAMIQAENYHAFRLAAENGHLHVLN 178
Query: 66 WMEHRPAVK 74
+ +
Sbjct: 179 RLCELAPTE 187
Score = 40.6 bits (94), Expect = 3e-06
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLV----LEAGGSLYVRAKDGMAPIHAAAQMGCL 61
S Q + + E L+ ++FL+ ++A D + A ++G
Sbjct: 271 SECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ 330
Query: 62 SCLKWMEHRPAV 73
+ P+V
Sbjct: 331 GACALLLSIPSV 342
Score = 33.3 bits (75), Expect = 0.001
Identities = 6/67 (8%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
+++ L+ +G +++ S ++ + + L ++++
Sbjct: 246 VNRLKEMHDAFKLSNPDGVFDLVT-------KSECLQGFYMLRNLIRRNDEVLLDDIRFL 298
Query: 68 EHRPAVK 74
P +K
Sbjct: 299 LSIPGIK 305
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 45.0 bits (105), Expect = 8e-08
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAA 56
N+Q N T + +AA+ G++ ++ L L+ G ++ K G+ P+ A
Sbjct: 253 NAQDSNGDTCLNIAARLGNISIVDAL-LDYGADPFIANKSGLRPVDFGA 300
Score = 38.5 bits (88), Expect = 2e-05
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 8 NSQMDND-VTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKW 66
N +D TP++ +LE++K L ++ G + G + + A +
Sbjct: 100 NIPVDEHGNTPLHWLTSIANLELVKHL-VKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 158
Query: 67 MEH 69
E
Sbjct: 159 FEA 161
Score = 34.3 bits (77), Expect = 6e-04
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD--GMAPIHAAAQMGCLSCLK 65
S + + E +L+ L L+ + + A+D G ++ AA++G +S +
Sbjct: 217 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 276
Query: 66 W 66
Sbjct: 277 A 277
Score = 25.8 bits (55), Expect = 0.56
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 46 KDGMAPIHAAAQMGCLSCLKWMEHRPA 72
+ G P+H + L +K + +
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGS 131
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 44.3 bits (103), Expect = 1e-07
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 10 QMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLK 65
Q ++ TP+ LAAQEG +EV+ +L ++ G S+ A + +
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYL-IQQGASVEAVDATDHTARQLAQANNHHNIVD 271
Score = 33.6 bits (75), Expect = 0.001
Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 8/74 (10%)
Query: 4 EMSANSQMDND-VTPVYLAAQEGHLEVLKFLV-------LEAGGSLYVRAKDGMAPIHAA 55
S N T ++ A E + L+ + AG + D P+ A
Sbjct: 22 RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA 81
Query: 56 AQMGCLSCLKWMEH 69
+ ++
Sbjct: 82 VLARRRRLVAYLMK 95
Score = 33.2 bits (74), Expect = 0.001
Identities = 7/61 (11%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 16 TPVYLAAQ-EGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAVK 74
+P+ L + G + + + E + + +H A + + A +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRE--SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 75 L 75
Sbjct: 60 C 60
Score = 30.5 bits (67), Expect = 0.011
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+S+ T ++ AAQ ++ ++K+LV E G + + +DG PI AAQ G
Sbjct: 174 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR 233
Query: 61 LSCLKW 66
+ + +
Sbjct: 234 IEVVMY 239
Score = 28.9 bits (63), Expect = 0.046
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFL 33
+ D T LA H ++
Sbjct: 248 EAVDATDHTARQLAQANNHHNIVDIF 273
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory
subunit 10, gankyrin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 229
Score = 43.7 bits (101), Expect = 3e-07
Identities = 9/55 (16%), Positives = 21/55 (38%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHR 70
P++ A E ++ L+ L + +DG P+H + ++ +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 56
Score = 32.5 bits (72), Expect = 0.002
Identities = 13/64 (20%), Positives = 20/64 (31%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ + N Q TP++ A EGH + LV + G + G A
Sbjct: 159 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV 218
Query: 61 LSCL 64
Sbjct: 219 KKFF 222
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 43.0 bits (100), Expect = 4e-07
Identities = 11/58 (18%), Positives = 26/58 (44%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLK 65
N + + TP+ LA ++ HL +++ L+ + + DG + A ++ +
Sbjct: 213 NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270
Score = 39.6 bits (91), Expect = 7e-06
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSL-YVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
D + A Q +++++ L LE G ++ + + G P+H A QM ++ +
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQL-LEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60
Score = 34.6 bits (78), Expect = 4e-04
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLS 62
+ T + AA++GH+EVLK L+ E G + G + A S
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196
Query: 63 CLKWMEH 69
++ + H
Sbjct: 197 DVEAITH 203
Score = 29.5 bits (65), Expect = 0.021
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD 47
N + T + LA + ++ + L + G S D
Sbjct: 247 NDTDSDGKTALLLAVELKLKKIAELL-CKRGAS--TDCGD 283
Score = 28.0 bits (61), Expect = 0.082
Identities = 7/58 (12%), Positives = 20/58 (34%)
Query: 12 DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ TP++ A Q ++++ L+ + + + AA ++
Sbjct: 37 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK 94
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 42.4 bits (98), Expect = 6e-07
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQ 57
+ N + + TP++ AA G E + L +E + K G A +
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL-VENLCDMEAVNKVGQTAFDVADE 274
Score = 37.8 bits (86), Expect = 3e-05
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRP 71
+D A G E + L LE G + DG+ +H A + +K++
Sbjct: 39 DDGAVFLAACSSGDTEEVLRL-LERGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96
Score = 31.2 bits (69), Expect = 0.005
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ ++ + T +++AA +G+ EVLK L+ +A + ++ DG P+HAAA G
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI-QARYDVNIKDYDGWTPLHAAAHWGK 244
Query: 61 LSCLKW 66
+
Sbjct: 245 EEACRI 250
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 41.6 bits (96), Expect = 1e-06
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 12 DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD--GMAPIHAAAQMGCLSCLKWMEH 69
++ T ++LA H L FL+ + G Y+ ++ G +H AA +G S ++ +
Sbjct: 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66
Score = 35.8 bits (81), Expect = 1e-04
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLS 62
+ TP++LA + VL+ L L+AG R G P+ +A
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELL-LKAGADPTARMYGGRTPLGSALLRPNPI 239
Query: 63 CLKW 66
+
Sbjct: 240 LARL 243
Score = 29.3 bits (64), Expect = 0.031
Identities = 6/31 (19%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG 38
++M TP+ A + + + L G
Sbjct: 219 TARMYGGRTPLGSALLRPNPILARLL-RAHG 248
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 39.4 bits (90), Expect = 6e-06
Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ + + N+QM + + ++ A+ G L +++ L + +G ++ P+ A
Sbjct: 164 LQHGANVNAQMYSGSSALHSASGRGLLPLVRTL-VRSGADSSLKNCHNDTPLMVARSRRV 222
Query: 61 LSCLK 65
+ L+
Sbjct: 223 IDILR 227
Score = 37.9 bits (86), Expect = 3e-05
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 12 DNDVTPVYLAAQEGHLEVLKFLV---LEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWME 68
++ TP+++A +G+L + LV + G L + P+H A S ++ +
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60
Query: 69 H 69
Sbjct: 61 T 61
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory
subunit 10, gankyrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 223
Score = 39.2 bits (90), Expect = 9e-06
Identities = 12/52 (23%), Positives = 19/52 (36%)
Query: 18 VYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
V A G LE LK +L +D +H A G ++++
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 58
Score = 33.8 bits (76), Expect = 6e-04
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67
N+ N TP++ AA + E+ L LE G + + +H AA G L + +
Sbjct: 97 NAVNQNGCTPLHYAASKNRHEIAVML-LEGGANPDAKDHYEATAMHRAAAKGNLKMIHIL 155
Query: 68 EH 69
+
Sbjct: 156 LY 157
Score = 33.0 bits (74), Expect = 0.001
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ Y+ S N Q TP++LA E +E K L + G S+Y+ K+ P+ A G
Sbjct: 156 LYYKASTNIQDTEGNTPLHLACDEERVEEAKLL-VSQGASIYIENKEEKTPLQVAKG-GL 213
Query: 61 LSCLKWM 67
LK M
Sbjct: 214 GLILKRM 220
Score = 24.5 bits (52), Expect = 1.4
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLV 34
+ + TP+ +A G +LK +V
Sbjct: 196 YIENKEEKTPLQVAK-GGLGLILKRMV 221
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 35.9 bits (81), Expect = 1e-04
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC 60
+ + + ++Q D D TP++LAA+EG E K L L+ + + P A++
Sbjct: 143 LMHHANRDAQDDKDETPLFLAAREGSYEASKAL-LDNFANREITDHMDRLPRDVASERLH 201
Query: 61 LSCLKWME 68
++ ++
Sbjct: 202 HDIVRLLD 209
Score = 27.8 bits (60), Expect = 0.088
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 28 EVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMEH 69
+V+ L L G L K G +H AA+ K +
Sbjct: 3 QVISDL-LAQGAELNATMDKTGETSLHLAARFARADAAKRLLD 44
Score = 26.7 bits (57), Expect = 0.29
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 8 NSQMDND-VTPVYLAAQEGHLEVLKFL 33
N+ MD T ++LAA+ + K L
Sbjct: 16 NATMDKTGETSLHLAARFARADAAKRL 42
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 34.5 bits (77), Expect = 5e-04
Identities = 6/57 (10%), Positives = 16/57 (28%), Gaps = 3/57 (5%)
Query: 16 TPVYLAAQEGHLEVLKFLV---LEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ ++LA + ++ L + P+H A + +
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60
Score = 27.5 bits (59), Expect = 0.11
Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 10 QMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ N T ++LA + +++ +L+ G + G +P + +
Sbjct: 141 EPCNGRTALHLAVDLQNPDLVSL-LLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 199
Query: 70 RPAVKL 75
L
Sbjct: 200 LTLENL 205
Score = 27.2 bits (58), Expect = 0.20
Identities = 4/27 (14%), Positives = 7/27 (25%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLV 34
N +P L + + L
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQQLG 198
Score = 22.5 bits (46), Expect = 8.1
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 47 DGMAPIHAAAQMGCLSCLKWM 67
DG + +H A + +
Sbjct: 1 DGDSFLHLAIIHEEKALTMEV 21
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 29.2 bits (64), Expect = 0.029
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG 38
++ TP+ +A + H + L +A
Sbjct: 108 EIANESGETPLDIAKRLKHEHCEELL-TQAL 137
Score = 24.6 bits (52), Expect = 1.3
Identities = 4/31 (12%), Positives = 12/31 (38%)
Query: 46 KDGMAPIHAAAQMGCLSCLKWMEHRPAVKLT 76
+ G P+ A ++ C + + + +
Sbjct: 112 ESGETPLDIAKRLKHEHCEELLTQALSGRFN 142
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 29.1 bits (63), Expect = 0.033
Identities = 6/34 (17%), Positives = 10/34 (29%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLV 34
+ + T LA G EV+ +
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153
Score = 28.7 bits (62), Expect = 0.040
Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ AA G LE L L L+ ++ + G + + +
Sbjct: 3 NELASAAARGDLEQLTSL-LQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLR 55
Score = 22.5 bits (46), Expect = 7.0
Identities = 5/25 (20%), Positives = 6/25 (24%)
Query: 43 VRAKDGMAPIHAAAQMGCLSCLKWM 67
R G A G + M
Sbjct: 128 HRNHKGDTACDLARLYGRNEVVSLM 152
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 29.0 bits (63), Expect = 0.039
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 8 NSQMDNDVTPVYLAAQEGHLEVLKFLV 34
+ + +TP+ LA Q G +++ L
Sbjct: 127 HRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 28.2 bits (61), Expect = 0.062
Identities = 6/54 (11%), Positives = 17/54 (31%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ AA G ++ ++ L+ + G + L+ ++
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQ 57
Score = 24.4 bits (51), Expect = 1.6
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 36 EAGGSLYVRAKDGMAPIHAAAQMGCLSCLK 65
A L+ R G+ P+ A Q G +
Sbjct: 121 AAESDLHRRDARGLTPLELALQRGAQDLVD 150
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 28.0 bits (60), Expect = 0.071
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFL 33
+ + PV LA + GH +V ++L
Sbjct: 89 HRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Score = 23.4 bits (48), Expect = 3.0
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 12 DNDVTPVYLAAQEGHLEVLKFLV 34
+ + AA G +E ++ L+
Sbjct: 1 EPSADWLATAAARGRVEEVRALL 23
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 27.9 bits (60), Expect = 0.079
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFL 33
+ Y ++Q T ++ G+ ++ + L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 26.0 bits (55), Expect = 0.47
Identities = 4/19 (21%), Positives = 10/19 (52%)
Query: 16 TPVYLAAQEGHLEVLKFLV 34
+ AA+ G + ++ L+
Sbjct: 4 KKLLEAARAGQDDEVRILM 22
Score = 22.5 bits (46), Expect = 7.4
Identities = 2/28 (7%), Positives = 10/28 (35%)
Query: 41 LYVRAKDGMAPIHAAAQMGCLSCLKWME 68
++ ++K + G + ++
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEILQ 153
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 118
Score = 25.2 bits (53), Expect = 0.77
Identities = 7/58 (12%), Positives = 14/58 (24%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEHRPAV 73
A + G L+ +K V + +AA + +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 24.6 bits (52), Expect = 1.3
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 16 TPVYLAAQEGHLEVLKFLV 34
+EG+ + +FL
Sbjct: 105 ADKCEEMEEGYTQCSQFLY 123
Score = 23.5 bits (49), Expect = 3.5
Identities = 7/54 (12%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 16 TPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMEH 69
+ ++ EG ++++ + + + +G+ +H A G +K++
Sbjct: 3 ALLLDSSLEGEFDLVQRI-IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ 55
>d2fsua1 c.67.2.1 (A:12-194) Phosphonate metabolism protein PhnH
{Escherichia coli [TaxId: 562]}
Length = 183
Score = 22.8 bits (49), Expect = 5.7
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGM-APIHAAAQMGCLSCLKW 66
DND TPV+L+ + V + L L + + A A L+ L
Sbjct: 45 ADND-TPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALST 100
>d1jnra3 d.168.1.1 (A:257-401) Adenylylsulfate reductase A subunit
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 145
Score = 22.0 bits (47), Expect = 9.8
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 43 VRAKDGMAPIHAAAQM 58
R KDG P+ A
Sbjct: 8 FRFKDGYGPVGAWFLF 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.131 0.392
Gapped
Lambda K H
0.267 0.0655 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 259,503
Number of extensions: 8839
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 71
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.0 bits)