Query psy14144
Match_columns 100
No_of_seqs 104 out of 1005
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 20:38:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.2E-26 7.7E-31 128.8 9.5 95 2-97 58-157 (169)
2 4gpm_A Engineered protein OR26 99.9 4.9E-25 1.7E-29 123.3 9.4 95 2-97 25-124 (169)
3 2jab_A H10-2-G3; HER2, darpin, 99.9 9.2E-24 3.1E-28 114.1 9.5 95 2-97 35-134 (136)
4 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.7E-23 9.2E-28 105.8 9.2 84 13-97 1-89 (93)
5 1awc_B Protein (GA binding pro 99.9 7.8E-23 2.7E-27 112.2 10.2 93 2-95 55-152 (153)
6 1d9s_A Cyclin-dependent kinase 99.9 7.4E-24 2.5E-28 114.4 5.9 93 3-97 34-132 (136)
7 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-22 4.9E-27 109.4 10.0 92 4-97 1-97 (137)
8 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.9E-23 3E-27 112.1 9.2 94 2-97 56-154 (156)
9 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-22 4.5E-27 111.9 9.5 95 2-97 58-158 (162)
10 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.5E-22 8.5E-27 111.8 9.4 93 3-96 36-133 (169)
11 4g8k_A 2-5A-dependent ribonucl 99.9 8E-23 2.7E-27 124.0 8.0 96 2-97 227-322 (337)
12 3v30_A DNA-binding protein rfx 99.9 2.1E-22 7.3E-27 112.2 9.0 93 3-96 58-155 (172)
13 3aaa_C Myotrophin, protein V-1 99.9 8.2E-23 2.8E-27 108.6 7.0 87 3-90 29-120 (123)
14 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.2E-22 1.1E-26 111.4 9.5 95 2-97 68-167 (169)
15 2rfm_A Putative ankyrin repeat 99.9 2.8E-22 9.7E-27 113.4 9.2 93 3-96 90-187 (192)
16 1d9s_A Cyclin-dependent kinase 99.9 1E-22 3.5E-27 110.0 6.9 92 4-97 2-99 (136)
17 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4E-22 1.4E-26 105.7 9.1 95 2-97 23-122 (126)
18 4b93_B Ankyrin repeat domain-c 99.9 5.1E-23 1.7E-27 122.2 6.2 86 2-88 140-230 (269)
19 3v31_A Ankyrin repeat family A 99.9 4.8E-22 1.6E-26 110.3 9.2 92 4-96 26-122 (167)
20 3v31_A Ankyrin repeat family A 99.9 5.4E-22 1.8E-26 110.1 9.4 95 2-97 57-156 (167)
21 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.9E-22 1.3E-26 110.1 8.7 95 1-97 25-124 (162)
22 4b93_B Ankyrin repeat domain-c 99.9 6E-22 2E-26 117.6 10.0 94 2-96 74-172 (269)
23 3f6q_A Integrin-linked protein 99.9 1.3E-21 4.4E-26 109.8 10.7 93 4-97 29-126 (179)
24 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-22 3.8E-27 112.0 6.2 94 2-97 33-132 (156)
25 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.1E-22 1.7E-26 116.0 9.1 96 1-97 57-160 (239)
26 2rfm_A Putative ankyrin repeat 99.9 5.1E-22 1.8E-26 112.4 8.7 94 3-97 57-155 (192)
27 3twr_A Tankyrase-2; ankyrin re 99.9 2.6E-22 9E-27 111.2 7.4 93 4-97 32-129 (165)
28 1yyh_A HN1;, notch 1, ankyrin 99.9 7.6E-22 2.6E-26 115.9 9.7 96 2-98 145-245 (253)
29 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-22 4.1E-27 109.7 5.8 94 2-96 31-129 (137)
30 2vge_A RELA-associated inhibit 99.9 1.6E-22 5.5E-27 117.7 6.7 94 3-97 43-144 (229)
31 2zgd_A 3 repeat synthetic anky 99.9 1.3E-21 4.5E-26 102.3 9.3 89 6-95 16-109 (110)
32 3twr_A Tankyrase-2; ankyrin re 99.9 2.4E-21 8.1E-26 107.3 10.6 94 2-97 63-161 (165)
33 1dcq_A PYK2-associated protein 99.9 1E-21 3.5E-26 117.2 9.5 90 7-97 162-259 (278)
34 4hbd_A KN motif and ankyrin re 99.9 7.5E-22 2.6E-26 117.4 8.9 94 3-97 172-271 (276)
35 3v30_A DNA-binding protein rfx 99.9 1.4E-21 4.8E-26 108.9 9.3 94 3-97 24-123 (172)
36 1awc_B Protein (GA binding pro 99.9 1.6E-21 5.5E-26 106.9 8.8 93 3-97 24-121 (153)
37 3deo_A Signal recognition part 99.9 2.2E-21 7.7E-26 109.3 9.5 88 4-92 66-159 (183)
38 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.7E-21 9.3E-26 106.1 9.1 92 4-97 26-122 (156)
39 3lvq_E ARF-GAP with SH3 domain 99.9 1.3E-21 4.3E-26 124.4 8.7 95 2-97 153-261 (497)
40 3ehr_A Osteoclast-stimulating 99.9 6.1E-22 2.1E-26 114.3 6.7 95 2-97 94-194 (222)
41 2xai_A ASB-9, ankyrin repeat a 99.9 2.9E-21 9.8E-26 113.9 9.6 95 2-97 24-122 (261)
42 3f6q_A Integrin-linked protein 99.9 8.8E-22 3E-26 110.4 6.8 95 2-97 60-159 (179)
43 2f8y_A Notch homolog 1, transl 99.9 3.6E-21 1.2E-25 110.8 9.5 94 3-97 114-212 (223)
44 3jxi_A Vanilloid receptor-rela 99.9 1.6E-21 5.6E-26 114.6 8.0 95 2-97 114-246 (260)
45 3ui2_A Signal recognition part 99.9 5.3E-21 1.8E-25 112.1 10.0 92 4-96 67-180 (244)
46 3jue_A Arfgap with coiled-coil 99.9 3.9E-21 1.3E-25 118.5 9.8 95 2-97 221-322 (368)
47 1oy3_D Transcription factor in 99.9 5.9E-21 2E-25 112.9 10.1 94 3-97 147-246 (282)
48 2b0o_E UPLC1; arfgap, structur 99.9 3E-21 1E-25 116.2 8.9 94 3-97 173-280 (301)
49 2etb_A Transient receptor pote 99.9 2.4E-21 8.1E-26 113.7 7.8 95 2-97 111-242 (256)
50 2l6b_A NR1C; ankyrin, consensu 99.9 2.6E-21 8.8E-26 101.7 7.1 88 9-97 4-96 (115)
51 3ljn_A Hypothetical protein; a 99.9 1.9E-21 6.5E-26 119.0 7.5 95 2-97 161-265 (364)
52 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-20 3.8E-25 114.4 10.7 94 3-97 47-145 (351)
53 3t8k_A Uncharacterized protein 99.8 4.1E-22 1.4E-26 112.9 3.9 95 2-97 63-175 (186)
54 3aaa_C Myotrophin, protein V-1 99.8 1.1E-20 3.8E-25 100.3 9.1 86 11-97 4-94 (123)
55 2pnn_A Transient receptor pote 99.8 4.3E-21 1.5E-25 113.6 7.9 95 2-97 122-254 (273)
56 2rfa_A Transient receptor pote 99.8 1E-20 3.5E-25 109.5 9.3 93 4-97 27-142 (232)
57 3kea_A K1L; tropism, ANK repea 99.8 4.3E-21 1.5E-25 114.6 7.9 95 2-97 83-182 (285)
58 3d9h_A CDNA FLJ77766, highly s 99.8 9.4E-21 3.2E-25 113.1 9.1 93 3-96 81-177 (285)
59 2dzn_A Probable 26S proteasome 99.8 2.1E-20 7E-25 107.8 10.2 91 5-96 98-194 (228)
60 1ikn_D Protein (I-kappa-B-alph 99.8 3.2E-20 1.1E-24 107.8 11.0 94 2-96 66-171 (236)
61 3aji_A 26S proteasome non-ATPa 99.8 1.7E-20 5.7E-25 108.5 9.5 91 4-95 96-191 (231)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.1E-20 3.7E-25 110.3 8.7 94 2-97 26-124 (239)
63 1n11_A Ankyrin; clathrin, BAND 99.8 1.4E-20 4.6E-25 117.4 9.3 93 3-96 3-100 (437)
64 1oy3_D Transcription factor in 99.8 1.6E-20 5.6E-25 111.0 9.2 90 7-97 2-99 (282)
65 2rfa_A Transient receptor pote 99.8 1.9E-20 6.7E-25 108.3 9.1 94 3-97 97-218 (232)
66 3aji_A 26S proteasome non-ATPa 99.8 2.9E-20 1E-24 107.5 9.4 93 3-96 62-159 (231)
67 3hra_A Ankyrin repeat family p 99.8 3.7E-20 1.3E-24 105.1 9.7 92 4-96 96-198 (201)
68 1yyh_A HN1;, notch 1, ankyrin 99.8 1.6E-20 5.6E-25 110.2 8.4 91 6-97 116-211 (253)
69 1k1a_A B-cell lymphoma 3-encod 99.8 5.9E-21 2E-25 110.8 6.1 90 6-96 108-203 (241)
70 3hra_A Ankyrin repeat family p 99.8 6.5E-20 2.2E-24 104.1 10.1 93 4-97 29-127 (201)
71 1s70_B 130 kDa myosin-binding 99.8 1.1E-20 3.8E-25 112.7 7.2 92 3-95 62-158 (299)
72 2vge_A RELA-associated inhibit 99.8 8E-20 2.7E-24 106.3 10.4 95 2-97 6-108 (229)
73 2f8y_A Notch homolog 1, transl 99.8 6.2E-20 2.1E-24 105.6 9.5 90 6-96 84-178 (223)
74 2jab_A H10-2-G3; HER2, darpin, 99.8 4E-20 1.4E-24 99.7 8.2 86 11-97 11-101 (136)
75 1n11_A Ankyrin; clathrin, BAND 99.8 4.1E-20 1.4E-24 115.3 9.3 91 4-95 268-363 (437)
76 3kea_A K1L; tropism, ANK repea 99.8 1.7E-20 5.8E-25 112.0 6.7 90 4-96 54-149 (285)
77 3b7b_A Euchromatic histone-lys 99.8 1.1E-19 3.8E-24 105.4 9.9 91 5-96 102-197 (237)
78 1sw6_A Regulatory protein SWI6 99.8 3.5E-20 1.2E-24 112.5 7.9 95 2-97 118-226 (327)
79 3jxi_A Vanilloid receptor-rela 99.8 1.1E-19 3.6E-24 106.8 9.4 90 6-96 85-205 (260)
80 1wdy_A 2-5A-dependent ribonucl 99.8 1.2E-19 4.1E-24 107.1 9.6 95 2-97 26-126 (285)
81 2fo1_E LIN-12 protein; beta-ba 99.8 6.3E-20 2.1E-24 113.0 8.5 87 10-97 275-367 (373)
82 1s70_B 130 kDa myosin-binding 99.8 1.1E-19 3.8E-24 108.4 9.3 95 2-97 94-253 (299)
83 1ikn_D Protein (I-kappa-B-alph 99.8 6.1E-20 2.1E-24 106.6 7.9 90 7-97 110-205 (236)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.2E-19 7.6E-24 95.0 9.5 84 13-97 1-89 (126)
85 3d9h_A CDNA FLJ77766, highly s 99.8 1.9E-19 6.6E-24 107.4 10.2 91 6-97 51-146 (285)
86 2xai_A ASB-9, ankyrin repeat a 99.8 1.5E-19 5.2E-24 106.5 9.4 92 3-96 58-154 (261)
87 3b7b_A Euchromatic histone-lys 99.8 2.9E-19 9.9E-24 103.6 10.3 92 4-96 34-131 (237)
88 3ehr_A Osteoclast-stimulating 99.8 2.7E-20 9.2E-25 107.4 5.9 88 9-97 68-161 (222)
89 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.3E-19 4.4E-24 92.0 7.8 71 2-73 23-93 (93)
90 2b0o_E UPLC1; arfgap, structur 99.8 2.2E-20 7.5E-25 112.5 5.6 86 2-89 214-299 (301)
91 1k1a_A B-cell lymphoma 3-encod 99.8 3.5E-19 1.2E-23 103.3 10.5 93 3-96 35-136 (241)
92 2pnn_A Transient receptor pote 99.8 3.8E-19 1.3E-23 105.2 10.3 87 9-96 96-213 (273)
93 2dzn_A Probable 26S proteasome 99.8 2.2E-19 7.5E-24 103.5 9.0 92 5-97 62-161 (228)
94 2etb_A Transient receptor pote 99.8 4.6E-19 1.6E-23 104.0 10.3 87 10-97 86-202 (256)
95 3ljn_A Hypothetical protein; a 99.8 1E-19 3.6E-24 111.3 7.9 93 4-97 10-105 (364)
96 4g8k_A 2-5A-dependent ribonucl 99.8 3E-19 1E-23 108.3 9.5 95 2-97 46-189 (337)
97 3deo_A Signal recognition part 99.8 8.4E-20 2.9E-24 102.8 6.5 85 11-97 41-131 (183)
98 2fo1_E LIN-12 protein; beta-ba 99.8 1.5E-19 5E-24 111.3 8.0 95 2-97 154-259 (373)
99 1wdy_A 2-5A-dependent ribonucl 99.8 7.7E-19 2.6E-23 103.7 10.2 94 3-97 171-274 (285)
100 4hbd_A KN motif and ankyrin re 99.8 1.3E-19 4.3E-24 107.8 6.8 90 7-97 104-237 (276)
101 1bi7_B P16INK4A, MTS1, multipl 99.8 8.1E-20 2.8E-24 100.5 5.5 89 7-97 5-99 (156)
102 3ui2_A Signal recognition part 99.8 4E-19 1.4E-23 104.1 7.4 85 11-97 42-132 (244)
103 3eu9_A Huntingtin-interacting 99.8 2.4E-18 8.1E-23 99.5 9.4 95 2-97 30-130 (240)
104 3utm_A Tankyrase-1; tankyrase, 99.8 1.6E-18 5.5E-23 104.9 8.6 80 3-83 236-320 (351)
105 3t8k_A Uncharacterized protein 99.8 1.3E-19 4.3E-24 102.7 3.5 92 5-97 28-141 (186)
106 3eu9_A Huntingtin-interacting 99.8 1.8E-18 6.2E-23 100.0 8.0 94 3-97 131-231 (240)
107 1sw6_A Regulatory protein SWI6 99.8 7.8E-19 2.7E-23 106.6 6.3 95 2-97 152-304 (327)
108 2l6b_A NR1C; ankyrin, consensu 99.7 3.9E-18 1.3E-22 89.4 5.7 73 1-74 29-101 (115)
109 3lvq_E ARF-GAP with SH3 domain 99.7 5.3E-18 1.8E-22 107.8 6.5 82 2-85 195-276 (497)
110 1dcq_A PYK2-associated protein 99.7 4E-17 1.4E-21 97.4 7.4 72 2-74 193-264 (278)
111 2aja_A Ankyrin repeat family p 99.7 6.6E-18 2.3E-22 104.4 3.9 87 9-97 123-220 (376)
112 3jue_A Arfgap with coiled-coil 99.7 2.5E-16 8.6E-21 97.2 7.9 85 12-97 197-289 (368)
113 2zgd_A 3 repeat synthetic anky 99.7 4.9E-16 1.7E-20 81.0 7.2 65 2-67 45-109 (110)
114 2aja_A Ankyrin repeat family p 99.6 4.7E-18 1.6E-22 105.1 -2.4 80 15-97 164-246 (376)
115 1gp8_A Protein (scaffolding pr 62.5 7.7 0.00026 15.9 2.2 16 18-33 17-32 (40)
116 1uhw_A Pleckstrin; three-helix 26.8 71 0.0024 16.3 2.8 23 61-83 41-63 (109)
117 3qil_A Clathrin heavy chain 1; 25.4 40 0.0014 17.8 1.6 17 17-33 38-54 (125)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=2.2e-26 Score=128.76 Aligned_cols=95 Identities=23% Similarity=0.335 Sum_probs=79.7
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|++++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..++.+++++|++.|+++ +|
T Consensus 58 ~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G 136 (169)
T 4gpm_A 58 SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDG 136 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 357788888888888888888888888888884 888888888888888888888888888888888888776 57
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|||++|+..|+.++++++.+
T Consensus 137 ~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 137 RTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 888888888888888887764
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=4.9e-25 Score=123.32 Aligned_cols=95 Identities=22% Similarity=0.333 Sum_probs=89.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..++.++++.|+ ..+++++.++..|+||||+|+..++.+++++|+++|+++ +|
T Consensus 25 ~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G 103 (169)
T 4gpm_A 25 ENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 103 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC
Confidence 479999999999999999999999999999995 999999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999998864
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=9.2e-24 Score=114.08 Aligned_cols=95 Identities=26% Similarity=0.392 Sum_probs=88.6
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..++.+++++|+ ..+++++..|..|.||||+|+..++.+++++|+++|+++ +|
T Consensus 35 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 113 (136)
T 2jab_A 35 ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFG 113 (136)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..|+.++++++.+
T Consensus 114 ~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 114 KTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999998864
No 4
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.7e-23 Score=105.80 Aligned_cols=84 Identities=32% Similarity=0.523 Sum_probs=77.5
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHhhC
Q psy14144 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSHYN 87 (100)
Q Consensus 13 ~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~~~ 87 (100)
+|+||||+|+..|+.+++++|+ +.+++++.+|..|.||||+|+..++.+++++|++.|+++ .|.||+|+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999995 899999999999999999999999999999999999877 5899999999999
Q ss_pred chhhhhhhhe
Q psy14144 88 IIRRRRVVFK 97 (100)
Q Consensus 88 ~~~~~~~~~~ 97 (100)
+.+++++++.
T Consensus 80 ~~~~~~~Ll~ 89 (93)
T 1n0q_A 80 HLEVVKLLLE 89 (93)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999998764
No 5
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=7.8e-23 Score=112.22 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=71.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|++++.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||+|+|+..++.+++++|+++|+++ .|
T Consensus 55 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 133 (153)
T 1awc_B 55 RAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFC 133 (153)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 456777777777888888888888888888774 777777777777888888888888888888888877766 46
Q ss_pred chHHHHHHhhCchhhhhhh
Q psy14144 77 LTACIILSHYNIIRRRRVV 95 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~ 95 (100)
.||+++|+..|+.++++++
T Consensus 134 ~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 134 KTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHh
Confidence 7888888888887777654
No 6
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=7.4e-24 Score=114.44 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=66.8
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCC-CCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD-GMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
+|+++|.+|..|.||||+|+. ++.+++++|+ ..+++++.++.. |.||||+|+..++.+++++|+++|+++ .|
T Consensus 34 ~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (136)
T 1d9s_A 34 AGADPNALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWG 111 (136)
T ss_dssp TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSS
T ss_pred cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 466677777777777777777 7777777774 677777777766 777777777777777777777777655 46
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..++.++++++++
T Consensus 112 ~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 112 RLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp SCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 677777777777777776653
No 7
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.4e-22 Score=109.37 Aligned_cols=92 Identities=14% Similarity=0.256 Sum_probs=74.1
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
|+++ .+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5566 66778888888888888888888884 788888888888888888888888888888888888766 4778
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..++.+++++++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~ 97 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLS 97 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH
Confidence 8888888888888887764
No 8
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=8.9e-23 Score=112.10 Aligned_cols=94 Identities=28% Similarity=0.319 Sum_probs=76.3
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++.++..|.||+|+|+..++.+++++|++. +++ .|
T Consensus 56 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 56 KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 357788888888888888888888888888884 78888888888888888888888888888888877 555 57
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..|+.++++++++
T Consensus 134 ~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 134 LTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CCHHHHHHHSCCHHHHHHHHT
T ss_pred CCHHHHHHHcCcHHHHHHHHh
Confidence 788888888888888887764
No 9
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.3e-22 Score=111.93 Aligned_cols=95 Identities=19% Similarity=0.255 Sum_probs=79.6
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc------c
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI------F 75 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~------~ 75 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||+|+|+..++.+++++|++.|.+. .
T Consensus 58 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 136 (162)
T 1ihb_A 58 LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL-EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHK 136 (162)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTT
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCC
Confidence 357788888888888888888888888888884 788888888888888888888888888888888888753 5
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||+++|+..|+.++++++++
T Consensus 137 g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 137 GDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHH
Confidence 7888988888888888887764
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=2.5e-22 Score=111.83 Aligned_cols=93 Identities=24% Similarity=0.379 Sum_probs=53.4
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||||+|+..++.+++++|+++|+++ +|.
T Consensus 36 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 114 (169)
T 2y1l_E 36 NGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGH 114 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 35555555555666666666666666666553 555555555555566666666666666666665555544 345
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||||+|+..|+.+++++++
T Consensus 115 t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 115 TPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHH
Confidence 5555555555555555544
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.88 E-value=8e-23 Score=124.03 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=89.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCcccchHHH
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNIFKLTACI 81 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~~~~t~l~ 81 (100)
.+|+++|.+|..|.||||+|+..|+.++++.|+...+++++.+|..|+||||+|+..|+.+++++|+++|++++..+||+
T Consensus 227 ~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~ 306 (337)
T 4g8k_A 227 DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVM 306 (337)
T ss_dssp HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHH
T ss_pred HCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHH
Confidence 46899999999999999999999999999999644688999999999999999999999999999999999999999999
Q ss_pred HHHhhCchhhhhhhhe
Q psy14144 82 ILSHYNIIRRRRVVFK 97 (100)
Q Consensus 82 ~a~~~~~~~~~~~~~~ 97 (100)
+|+..|+.++++++++
T Consensus 307 ~A~~~~~~~iv~~Ll~ 322 (337)
T 4g8k_A 307 TARRNYDHSLVKVLLS 322 (337)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHH
Confidence 9999999999999874
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=2.1e-22 Score=112.18 Aligned_cols=93 Identities=13% Similarity=0.209 Sum_probs=58.5
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|.
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 58 WGADPHILAKERESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 45566666666666666666666666666663 566666666666666666666666666666666666555 355
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||+++|+..++.++++++.
T Consensus 137 t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 137 TPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp CHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHHH
Confidence 6666666666666666554
No 13
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=8.2e-23 Score=108.61 Aligned_cols=87 Identities=26% Similarity=0.381 Sum_probs=63.0
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|.++|.+|..|.||||+|+..++.+++++|+ ..+++++.+|..|+||||+|+..++.+++++|+++|+++ .|.
T Consensus 29 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 107 (123)
T 3aaa_C 29 KGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL 107 (123)
T ss_dssp TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 56677777777777777777777777777774 777777777777777777777777777777777777665 467
Q ss_pred hHHHHHHhhCchh
Q psy14144 78 TACIILSHYNIIR 90 (100)
Q Consensus 78 t~l~~a~~~~~~~ 90 (100)
||+++|...+..+
T Consensus 108 t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 108 TAFEATDNQAIKA 120 (123)
T ss_dssp CHHHHCCCHHHHH
T ss_pred CHHHHhCCHHHHH
Confidence 7777775444443
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=3.2e-22 Score=111.39 Aligned_cols=95 Identities=26% Similarity=0.366 Sum_probs=88.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|++++.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|
T Consensus 68 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 146 (169)
T 2y1l_E 68 KNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFG 146 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..|+.++++++.+
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHhCCHHHHHHHHH
Confidence 899999999999999998865
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=2.8e-22 Score=113.43 Aligned_cols=93 Identities=22% Similarity=0.207 Sum_probs=55.6
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|++++.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||+|+|+..++.+++++|+++|+++ .|.
T Consensus 90 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 90 KGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGL 168 (192)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 35555556666666666666666666666663 556666555566666666666666666666666665544 355
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||+++|+..|+.++++++.
T Consensus 169 t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 169 TAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp BHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHHH
Confidence 6666666666666665554
No 16
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1e-22 Score=109.97 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=86.1
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c-cc
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F-KL 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~-~~ 77 (100)
++++|.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|+||||+|+. ++.+++++|+++|+++ . |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 5688999999999999999999999999995 8999999999999999999999 9999999999999887 4 89
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.+++++++.
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~ 99 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHR 99 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999998864
No 17
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=4e-22 Score=105.73 Aligned_cols=95 Identities=29% Similarity=0.465 Sum_probs=87.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|.+++.+|..|.||||+|+..++.+++++|+ ..+++++.++..|.||+|+|+..++.+++++|+++|+++ .|
T Consensus 23 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 101 (126)
T 1n0r_A 23 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 101 (126)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCC
Confidence 357889999999999999999999999999995 899999999999999999999999999999999999876 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..++.++++++++
T Consensus 102 ~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 102 RTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHH
Confidence 899999999999999998764
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.88 E-value=5.1e-23 Score=122.23 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=72.7
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||||+|+..|+.+++++|+++|+++ +|
T Consensus 140 ~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 218 (269)
T 4b93_B 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLL-QHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQ 218 (269)
T ss_dssp HTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 357888888888888888888888888888884 888888888888888888888888888888888888876 57
Q ss_pred chHHHHHHhhCc
Q psy14144 77 LTACIILSHYNI 88 (100)
Q Consensus 77 ~t~l~~a~~~~~ 88 (100)
.|||++|+..++
T Consensus 219 ~TpL~~A~~~~~ 230 (269)
T 4b93_B 219 RTAVDCAEQNSK 230 (269)
T ss_dssp CCSGGGSCTTCH
T ss_pred CCHHHHHHhCCc
Confidence 888888887765
No 19
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=4.8e-22 Score=110.28 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=49.5
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
|.++|.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||+|.|+..++.+++++|++.|+++ .|.|
T Consensus 26 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 104 (167)
T 3v31_A 26 ENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGT 104 (167)
T ss_dssp SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCC
Confidence 4445555555555555555555555555553 455555555555555555555555555555555555444 2455
Q ss_pred HHHHHHhhCchhhhhhhh
Q psy14144 79 ACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~ 96 (100)
|||+|+..|+.+++++++
T Consensus 105 ~L~~A~~~~~~~~v~~Ll 122 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLL 122 (167)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 555555555555555443
No 20
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=5.4e-22 Score=110.08 Aligned_cols=95 Identities=14% Similarity=0.173 Sum_probs=88.8
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|++++..|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||+|+|+..++.+++++|+++|+++ .|
T Consensus 57 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 135 (167)
T 3v31_A 57 QNGADPQLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 135 (167)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..|+.++++++..
T Consensus 136 ~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 136 YNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHH
Confidence 899999999999999998764
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=3.9e-22 Score=110.06 Aligned_cols=95 Identities=20% Similarity=0.237 Sum_probs=88.3
Q ss_pred CCccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 1 ~~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
+.+|.++|.+|..|.||||+|+. |+.+++++|+ ..+++++.++..|.||+|+|+..++.+++++|++.|+++ +
T Consensus 25 l~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 102 (162)
T 1ihb_A 25 LQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNE 102 (162)
T ss_dssp TTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HhCCCCccccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 35788999999999999999999 9999999995 899999999999999999999999999999999999876 5
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||||+|+..|+.+++++++.
T Consensus 103 g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 103 GNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH
Confidence 8899999999999999998864
No 22
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.88 E-value=6e-22 Score=117.64 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=59.8
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
..|+++|.+|.+|.||||+|+..|+.+++++|+ ..++++...+..|.||++.++..++.+++++|++.|+++ .|
T Consensus 74 ~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g 152 (269)
T 4b93_B 74 ASGLGVNVTSQDGSSPLHVAALHGRADLIPLLL-KHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSG 152 (269)
T ss_dssp -CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-hcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCC
Confidence 467888888888888888888888888888874 666666555555555555555555555555555555444 34
Q ss_pred chHHHHHHhhCchhhhhhhh
Q psy14144 77 LTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~ 96 (100)
.||||+|+..|+.+++++++
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll 172 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLL 172 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHH
Confidence 45555555555555555443
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=1.3e-21 Score=109.75 Aligned_cols=93 Identities=19% Similarity=0.244 Sum_probs=81.9
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
+.++|..|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|.|
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 107 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNV 107 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 5678888888999999999999999999994 889998888889999999999999999999999998876 5789
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..++.+++++++.
T Consensus 108 ~L~~A~~~~~~~~v~~Ll~ 126 (179)
T 3f6q_A 108 PLHYACFWGQDQVAEDLVA 126 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH
Confidence 9999999999998888764
No 24
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=1.1e-22 Score=112.01 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=85.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCc-HHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMA-PIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
.+|+++|.+|..|.||||+|+ .|+.+++++|+ ..|++++..+..|.| |||+|+..++.+++++|+++|+++ .
T Consensus 33 ~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 110 (156)
T 1bi7_B 33 EAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAW 110 (156)
T ss_dssp TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT
T ss_pred HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCC
Confidence 568899999999999999985 89999999995 899999999999999 999999999999999999999877 5
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||||+|+..|+.+++++++.
T Consensus 111 g~tpl~~A~~~~~~~~v~~Ll~ 132 (156)
T 1bi7_B 111 GRLPVDLAEELGHRDVARYLRA 132 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHSS
T ss_pred CCCHHHHHHHhCHHHHHHHHHH
Confidence 8899999999999999998865
No 25
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=5.1e-22 Score=115.95 Aligned_cols=96 Identities=21% Similarity=0.291 Sum_probs=80.1
Q ss_pred CCccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 1 ~~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
+.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..|..|+||||+|+..++.+++++|+++|+++ .
T Consensus 57 l~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 135 (239)
T 1ycs_B 57 IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 135 (239)
T ss_dssp TSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCC
Confidence 3567888888888899999999999999999884 888888888888999999999999999999999888877 2
Q ss_pred cc-hHHHHH--HhhCchhhhhhhhe
Q psy14144 76 KL-TACIIL--SHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~-t~l~~a--~~~~~~~~~~~~~~ 97 (100)
+. ||+++| +..|+.+++++++.
T Consensus 136 ~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 136 DMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp SCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CCcchHHHHHHhhhccHHHHHHHHH
Confidence 34 899888 67788888887764
No 26
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.87 E-value=5.1e-22 Score=112.37 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=84.4
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|++++.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.|+++ .|.
T Consensus 57 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (192)
T 2rfm_A 57 NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGE 135 (192)
T ss_dssp HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred hccccccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 57788889999999999999999999999995 889999888999999999999999999999999998876 578
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.+++++++.
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 136 TPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999988764
No 27
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=2.6e-22 Score=111.15 Aligned_cols=93 Identities=16% Similarity=0.327 Sum_probs=69.4
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
+.+++..+..|.||||+|+..|+.+++++|+ +.+++++..+..|.||||+|+..++.+++++|+++|+++ .|.|
T Consensus 32 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 110 (165)
T 3twr_A 32 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110 (165)
T ss_dssp TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCC
Confidence 3455666667778888888888888887774 777777777777788888888888888888887777766 4677
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..|+.+++++++.
T Consensus 111 ~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 111 PLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH
Confidence 8888888887777777654
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.87 E-value=7.6e-22 Score=115.86 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=84.6
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|+++|+++ .|
T Consensus 145 ~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCC
Confidence 467888999999999999999999999999994 889999888889999999999999999999999998876 57
Q ss_pred chHHHHHHhhCchhhhhhhhee
Q psy14144 77 LTACIILSHYNIIRRRRVVFKI 98 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~~ 98 (100)
.||+++|+..|+.++++++...
T Consensus 224 ~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 224 RLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHH
Confidence 8999999999999999887653
No 29
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=1.2e-22 Score=109.70 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=86.3
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ +|
T Consensus 31 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 109 (137)
T 3c5r_A 31 QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109 (137)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 68
Q ss_pred chHHHHHHhhCchhhhhhhh
Q psy14144 77 LTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~ 96 (100)
.||+++|+..+..+++.++.
T Consensus 110 ~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 110 LRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp CCGGGGCCCHHHHHHHSCC-
T ss_pred CCHHHHHhhccHHHHHhhcc
Confidence 99999999999888877654
No 30
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.6e-22 Score=117.68 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=63.4
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc------cc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI------FK 76 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~------~~ 76 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..|..|+||||+|+..++.+++++|++.|+++ .|
T Consensus 43 ~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g 121 (229)
T 2vge_A 43 EMNDPSQPNEEGITALHNAICGANYSIVDFLI-TAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDG 121 (229)
T ss_dssp HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTT
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCC
Confidence 45666666666777777777777777777663 666666666666777777777777777777777666654 35
Q ss_pred chHHHHH--HhhCchhhhhhhhe
Q psy14144 77 LTACIIL--SHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a--~~~~~~~~~~~~~~ 97 (100)
.|||++| +..|+.+++++++.
T Consensus 122 ~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 122 ATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp CCTGGGCCTTSTTHHHHHHHHHH
T ss_pred CCHHHHHHHHhcChHHHHHHHHH
Confidence 6777776 66666666666543
No 31
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.87 E-value=1.3e-21 Score=102.34 Aligned_cols=89 Identities=21% Similarity=0.289 Sum_probs=78.2
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHH
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTAC 80 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l 80 (100)
.++..|.+|.|+||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..++.+++++|+++|+++ .|.||+
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 45567888999999999999999999995 899999999999999999999999999999999999877 588999
Q ss_pred HHHHhhCchhhhhhh
Q psy14144 81 IILSHYNIIRRRRVV 95 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~ 95 (100)
++|+..|+.++++++
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999998865
No 32
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=2.4e-21 Score=107.30 Aligned_cols=94 Identities=19% Similarity=0.196 Sum_probs=86.7
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||+|+|+..++.+++++|+++|+++ .|
T Consensus 63 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 141 (165)
T 3twr_A 63 QHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 141 (165)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH-hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 68
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|.. ++.++++++..
T Consensus 142 ~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 142 NTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp CCTGGGSCT-TCHHHHHHHHT
T ss_pred CChhHhHhc-CChHHHHHHhh
Confidence 999999877 88899988764
No 33
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=1e-21 Score=117.17 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=83.0
Q ss_pred CccCCCCCchHHHHHHHh---CCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 7 ANSQMDNDVTPVYLAAQE---GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 7 ~n~~~~~g~t~l~~a~~~---g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
++..|..|.||||+|+.. |+.+++++|+ ..|++++.+|..|.||||+|+..++.+++++|+++|+++ +|.|
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 240 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGET 240 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCC
Confidence 445578899999999999 8999999995 899999999999999999999999999999999999987 6899
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..|+.++++++..
T Consensus 241 pL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 241 PLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH
Confidence 9999999999999998864
No 34
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=7.5e-22 Score=117.43 Aligned_cols=94 Identities=18% Similarity=0.252 Sum_probs=86.4
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHH-hcCCc-----cc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLY-EACNI-----FK 76 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~-~g~~~-----~~ 76 (100)
.|..++..|..|.||||+|+..|+.+++++|+ ..|++++.+|..|+||||+|+..++.+++++|++ .|+++ .|
T Consensus 172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll-~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALL-ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 46677778888999999999999999999995 8999999999999999999999999999999999 78776 68
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|||++|+..|+.++++++++
T Consensus 251 ~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 251 STALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999998875
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=1.4e-21 Score=108.87 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=86.2
Q ss_pred ccCC-CccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 3 YEMS-ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 3 ~~~~-~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+.. ++.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||||+|+..++.+++++|++.|+++ .|
T Consensus 24 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 102 (172)
T 3v30_A 24 KGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNG 102 (172)
T ss_dssp TCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred cCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 3444 7888999999999999999999999995 899999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 103 ~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 103 GTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999998864
No 36
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=1.6e-21 Score=106.94 Aligned_cols=93 Identities=26% Similarity=0.272 Sum_probs=84.6
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|.+++ .+..|.||||+|+..|+.+++++|+ +.+++++..+..|.||||+|+..++.+++++|+++|+++ +|.
T Consensus 24 ~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 101 (153)
T 1awc_B 24 NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKM 101 (153)
T ss_dssp HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCC
Confidence 456655 5778999999999999999999995 899999999999999999999999999999999999877 588
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.+++++++.
T Consensus 102 t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 102 TALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999998864
No 37
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=2.2e-21 Score=109.25 Aligned_cols=88 Identities=20% Similarity=0.237 Sum_probs=78.1
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc-CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..+ ..|+||||+|+..++.+++++|+++|+++ +|.
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 144 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGL 144 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCC
Confidence 7889999999999999999999999999995 8999998887 88999999999999999999999999877 578
Q ss_pred hHHHHHHhhCchhhh
Q psy14144 78 TACIILSHYNIIRRR 92 (100)
Q Consensus 78 t~l~~a~~~~~~~~~ 92 (100)
||+++|+..++.+..
T Consensus 145 tpl~~A~~~~~~~~~ 159 (183)
T 3deo_A 145 TALELAREILKTTPK 159 (183)
T ss_dssp CHHHHHHHHHHTCCC
T ss_pred CHHHHHHHhccCccc
Confidence 999998887655443
No 38
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=2.7e-21 Score=106.14 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=85.5
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
+.+++..|..|.||||+ +..|+.+++++|+ +.|++++..+..|.||||+|+..++.+++++|++.|+++ .|.|
T Consensus 26 ~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (156)
T 1bd8_A 26 LVHPDALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL 103 (156)
T ss_dssp CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CcCccccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCc
Confidence 45888999999999999 9999999999995 899999999999999999999999999999999999876 5899
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..|+.+++++++.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 104 PIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHhChHHHHHHHHh
Confidence 9999999999999998864
No 39
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.3e-21 Score=124.37 Aligned_cols=95 Identities=21% Similarity=0.252 Sum_probs=87.5
Q ss_pred CccCCCccC------CCCCchHHHHHHH---hCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcC
Q psy14144 2 TYEMSANSQ------MDNDVTPVYLAAQ---EGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEAC 72 (100)
Q Consensus 2 ~~~~~~n~~------~~~g~t~l~~a~~---~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~ 72 (100)
..|+++|.. |..|.||||+|+. .|+.+++++|+ ..|++++..|..|+||||+|+..|+.+++++|+++|+
T Consensus 153 ~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 153 ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC
T ss_pred hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 467888877 8889999999976 89999999995 8999999999999999999999999999999999999
Q ss_pred Cc-----ccchHHHHHHhhCchhhhhhhhe
Q psy14144 73 NI-----FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 73 ~~-----~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
++ +|.||||+|+..|+.++++++..
T Consensus 232 ~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 232 LVGTVNEAGETALDIARKKHHKECEELLEQ 261 (497)
T ss_dssp CCSCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 87 58999999999999999998864
No 40
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=6.1e-22 Score=114.30 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=81.3
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhh-CCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEA-GGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
..|+++|.+|..|.||||+|+..|+.+++++|+ .. +++++..+..|+||||+|+..++.+++++|+++|+++ +
T Consensus 94 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 172 (222)
T 3ehr_A 94 DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF-TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE 172 (222)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHT-TSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTT
T ss_pred hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-cCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 367889999999999999999999999999995 66 8899888999999999999999999999999998876 5
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||+++|+..++.++++.+..
T Consensus 173 g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 173 KKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp SCCHHHHCCSHHHHHHHC----
T ss_pred CCCHHHHhcchhHHHHHHHHhc
Confidence 7899999999998888877654
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.86 E-value=2.9e-21 Score=113.91 Aligned_cols=95 Identities=17% Similarity=0.243 Sum_probs=78.2
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc----ccc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI----FKL 77 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~----~~~ 77 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|++.|+++ ++.
T Consensus 24 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~ 102 (261)
T 2xai_A 24 SQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA 102 (261)
T ss_dssp HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 357788888888888888888888888888884 788888888888888888888888888888888888766 467
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.++++++++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~ 122 (261)
T 2xai_A 103 SPIHEAARRGHVECVNSLIA 122 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCcHHHHHHHHH
Confidence 88888888888887777654
No 42
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=8.8e-22 Score=110.42 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=88.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|
T Consensus 60 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 138 (179)
T 3f6q_A 60 MRGARINVMNRGDDTPLHLAASHGHRDIVQKLL-QYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138 (179)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTS
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCC
Confidence 468899999999999999999999999999995 899999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||+++|+..++.++++++.+
T Consensus 139 ~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 139 EMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp CCGGGGSCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999998887754
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=3.6e-21 Score=110.75 Aligned_cols=94 Identities=16% Similarity=0.102 Sum_probs=73.5
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ +.+++++..+..|.||+|+|+..++.+++++|+++|+++ .|.
T Consensus 114 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 192 (223)
T 2f8y_A 114 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR 192 (223)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCC
Confidence 56777777777888888888888888888874 777777777777888888888888888888888887766 467
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||+++|+..++.++++++.+
T Consensus 193 t~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 193 LPRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHhcchHHHHHHHH
Confidence 88888888888888777654
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.86 E-value=1.6e-21 Score=114.57 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=85.7
Q ss_pred CccCCCccCC--------------CCCchHHHHHHHhCCHHHHHHHHHh---hCCCcccccCCCCcHHHHHHHhCC----
Q psy14144 2 TYEMSANSQM--------------DNDVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQMGC---- 60 (100)
Q Consensus 2 ~~~~~~n~~~--------------~~g~t~l~~a~~~g~~~~~~~l~~~---~~~~~~~~~~~g~t~l~~a~~~~~---- 60 (100)
.+|+++|.++ ..|.||||+|+..|+.+++++|+ . .|++++.+|..|+||||+|+..++
T Consensus 114 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~ 192 (260)
T 3jxi_A 114 EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT-ENGHKQADLRRQDSRGNTVLHALVAIADNTRE 192 (260)
T ss_dssp HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHH
T ss_pred hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH-hccccCCCCcccCCCCCcHHHHHHHhccCchh
Confidence 4678888887 68999999999999999999995 8 899999999999999999998887
Q ss_pred -----HHHHHHHHHhcCCc------------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 61 -----LSCLKWMLYEACNI------------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 61 -----~~~~~~ll~~g~~~------------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.+++++|++.|+++ .|.||||+|+..|+.++++++++
T Consensus 193 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 246 (260)
T 3jxi_A 193 NTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 78999999997754 58999999999999999998875
No 45
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=5.3e-21 Score=112.06 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=80.1
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc-CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..+ ..|+||||+|+..++.+++++|+++|+++ .|.
T Consensus 67 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 145 (244)
T 3ui2_A 67 DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGL 145 (244)
T ss_dssp TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 7899999999999999999999999999995 8999998887 78999999999999999999999999877 467
Q ss_pred hHHHHHH----------------hhCchhhhhhhh
Q psy14144 78 TACIILS----------------HYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~----------------~~~~~~~~~~~~ 96 (100)
||||+|+ ..|+.++++++.
T Consensus 146 t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~ 180 (244)
T 3ui2_A 146 TALELAREILKTTPKGNPMQFGRRIGLEKVINVLE 180 (244)
T ss_dssp CHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHH
Confidence 7777776 556666666554
No 46
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=3.9e-21 Score=118.48 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=88.5
Q ss_pred CccCCCccCC--CCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----
Q psy14144 2 TYEMSANSQM--DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI----- 74 (100)
Q Consensus 2 ~~~~~~n~~~--~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~----- 74 (100)
.+|+++|..+ ..|.||||+|+..|+.+++++|+ ..|++++..|..|.||||+|+..++.+++++|+++|+++
T Consensus 221 ~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 221 AHGADVNWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCC
Confidence 4688999988 78999999999999999999995 899999999999999999999999999999999999877
Q ss_pred ccchHHHHHHhhCchhhhhhhhe
Q psy14144 75 FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 75 ~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
+|.|||++|+..++.++++++..
T Consensus 300 ~G~TpL~~A~~~g~~~iv~lLl~ 322 (368)
T 3jue_A 300 EGRDPLTIAMETANADIVTLLRL 322 (368)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH
Confidence 58999999999999999998763
No 47
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.86 E-value=5.9e-21 Score=112.90 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=85.8
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccC-CCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+.+++.+|..|.||||+|+..|+.+++++|+ ..|++++..+. .|.||||+|+..++.+++++|+++|+++ .|
T Consensus 147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 225 (282)
T 1oy3_D 147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225 (282)
T ss_dssp GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Confidence 35668889999999999999999999999995 89999988875 4999999999999999999999999887 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll~ 246 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLRA 246 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHHH
T ss_pred CCHHHHHHHcCCcHHHHHHHH
Confidence 999999999999999998864
No 48
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=3e-21 Score=116.23 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=86.0
Q ss_pred ccCCCcc------CCCCCchHHHHHHHh---CCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCC
Q psy14144 3 YEMSANS------QMDNDVTPVYLAAQE---GHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACN 73 (100)
Q Consensus 3 ~~~~~n~------~~~~g~t~l~~a~~~---g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~ 73 (100)
.|+++|. .+..|.||||+|+.. ++.+++++|+ ..|++++.+|..|+||||+|+..++.+++++|+++|++
T Consensus 173 ~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad 251 (301)
T 2b0o_E 173 NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL 251 (301)
T ss_dssp TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5777777 688899999999997 8999999995 89999999999999999999999999999999999988
Q ss_pred c-----ccchHHHHHHhhCchhhhhhhhe
Q psy14144 74 I-----FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 74 ~-----~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
+ +|.|||++|+..++.++++++..
T Consensus 252 ~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 252 VGTVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp CSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 7 58899999999999999998764
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=2.4e-21 Score=113.73 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=85.8
Q ss_pred CccCCCccCCCC-------------CchHHHHHHHhCCHHHHHHHHHh---hCCCcccccCCCCcHHHHHHH--hCCHH-
Q psy14144 2 TYEMSANSQMDN-------------DVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQ--MGCLS- 62 (100)
Q Consensus 2 ~~~~~~n~~~~~-------------g~t~l~~a~~~g~~~~~~~l~~~---~~~~~~~~~~~g~t~l~~a~~--~~~~~- 62 (100)
.+|+++|.+|.. |.||||+|+..|+.+++++|+ + .|++++.+|..|+||||+|+. .++.+
T Consensus 111 ~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~ 189 (256)
T 2etb_A 111 ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL-ENPHQPASLEATDSLGNTVLHALVMIADNSPEN 189 (256)
T ss_dssp HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH-hccccCCCcCccCCCCCCHHHHHHHcccCCchh
Confidence 467888888876 999999999999999999995 8 899999999999999999999 77888
Q ss_pred ------HHHHHHHhcCCc------------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 63 ------CLKWMLYEACNI------------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 63 ------~~~~ll~~g~~~------------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
++++|+++|+++ .|.||||+|+..|+.++++++++
T Consensus 190 ~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 242 (256)
T 2etb_A 190 SALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 999999987655 58999999999999999998875
No 50
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=2.6e-21 Score=101.67 Aligned_cols=88 Identities=25% Similarity=0.298 Sum_probs=82.1
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHH
Q psy14144 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIIL 83 (100)
Q Consensus 9 ~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a 83 (100)
.+|.+|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.|+++ .|.|||++|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 56889999999999999999999994 899999999999999999999999999999999999877 589999999
Q ss_pred HhhCchhhhhhhhe
Q psy14144 84 SHYNIIRRRRVVFK 97 (100)
Q Consensus 84 ~~~~~~~~~~~~~~ 97 (100)
+..++.++++++++
T Consensus 83 ~~~~~~~~~~~Ll~ 96 (115)
T 2l6b_A 83 KKNGHHEIVKLLDA 96 (115)
T ss_dssp HTTTCHHHHHHHHT
T ss_pred HHCCCHHHHHHHHH
Confidence 99999999998864
No 51
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=1.9e-21 Score=118.99 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=84.5
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCC-----cccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc--
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS-----LYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-- 74 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-- 74 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++ ++..+..|.||||+|+..++.+++++|+++|+++
T Consensus 161 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 161 QLGASPTAKDKADETPLMRAMEFRNREALDLMM-DTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-hcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 357889999999999999999999999999994 88887 8888889999999999999999999999998877
Q ss_pred ---ccchHHHHHHhhCchhhhhhhhe
Q psy14144 75 ---FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 75 ---~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|.|||++|+..|+.+++++++.
T Consensus 240 ~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 240 EDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp CCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 57899999999999999988875
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.85 E-value=1.1e-20 Score=114.39 Aligned_cols=94 Identities=17% Similarity=0.346 Sum_probs=87.9
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
.+.++|..|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||||+|+..++.+++++|+++|+++ .|.
T Consensus 47 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~ 125 (351)
T 3utm_A 47 LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQF 125 (351)
T ss_dssp TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 47788999999999999999999999999995 899999999999999999999999999999999999877 478
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.+++++++.
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999998875
No 53
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=4.1e-22 Score=112.93 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=83.7
Q ss_pred CccCCCccCCCCCchHHHHHHHhCC------HHHHHHHHHhhCCCcccccCCCC-cHHHHHHHhC-----CHHHHHHHHH
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGH------LEVLKFLVLEAGGSLYVRAKDGM-APIHAAAQMG-----CLSCLKWMLY 69 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~------~~~~~~l~~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~ll~ 69 (100)
.+|+++|.+|..|+||||+|+..++ .+++++|+ ..|++++.+|..|. ||||+|+..+ ..+++++|++
T Consensus 63 ~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll-~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 63 NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL-EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH-HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHH-HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 4799999999999999999999886 57789895 89999999999999 9999999844 4568899999
Q ss_pred -hcCCc-----ccchHHHHHHhhCchhhhhhhhe
Q psy14144 70 -EACNI-----FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 70 -~g~~~-----~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|+++ .|.||||+|++.|+.+.++++..
T Consensus 142 ~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 142 QSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp STTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred hcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 89887 68999999999999999988764
No 54
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=1.1e-20 Score=100.30 Aligned_cols=86 Identities=20% Similarity=0.271 Sum_probs=78.1
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHh
Q psy14144 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSH 85 (100)
Q Consensus 11 ~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~ 85 (100)
+..|.||||+|+..|+.++++.|+ ..+++++..+..|+||||+|+..++.+++++|++.|+++ .|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 456899999999999999999995 899999999999999999999999999999999999877 58999999999
Q ss_pred hCchhhhhhhhe
Q psy14144 86 YNIIRRRRVVFK 97 (100)
Q Consensus 86 ~~~~~~~~~~~~ 97 (100)
.++.+++++++.
T Consensus 83 ~~~~~~v~~Ll~ 94 (123)
T 3aaa_C 83 EGHVSCVKLLLS 94 (123)
T ss_dssp HTCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 999999998864
No 55
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.85 E-value=4.3e-21 Score=113.59 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=85.5
Q ss_pred CccCCCccCCC--------------CCchHHHHHHHhCCHHHHHHHHHh---hCCCcccccCCCCcHHHHHHHhCC----
Q psy14144 2 TYEMSANSQMD--------------NDVTPVYLAAQEGHLEVLKFLVLE---AGGSLYVRAKDGMAPIHAAAQMGC---- 60 (100)
Q Consensus 2 ~~~~~~n~~~~--------------~g~t~l~~a~~~g~~~~~~~l~~~---~~~~~~~~~~~g~t~l~~a~~~~~---- 60 (100)
.+|+++|.++. .|.||||+|+..|+.+++++|+ + .|++++.+|..|+||||+|+..++
T Consensus 122 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~ 200 (273)
T 2pnn_A 122 ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL-QNSWQPADISARDSVGNTVLHALVEVADNTVD 200 (273)
T ss_dssp HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH-HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH-hcccCCCCceeeCCCCCcHHHHHHHccCcchh
Confidence 35788888876 7999999999999999999995 8 899999999999999999999988
Q ss_pred -----HHHHHHHHHhcCCc------------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 61 -----LSCLKWMLYEACNI------------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 61 -----~~~~~~ll~~g~~~------------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.+++++|++.|+++ .|.||||+|+..|+.+++++++.
T Consensus 201 ~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 254 (273)
T 2pnn_A 201 NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ 254 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 78999999987643 57899999999999999998874
No 56
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.85 E-value=1e-20 Score=109.51 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=84.4
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCc-----ccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc----
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSL-----YVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI---- 74 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~-----~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~---- 74 (100)
|+++|.+|..|.||||+|+..|+.+++++|+ ..++++ ...+..|.||||+|+..++.+++++|+++|+++
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 105 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALYDNLEAAMVLM-EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARA 105 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCccc
Confidence 8899999999999999999999999999995 888876 445678999999999999999999999998876
Q ss_pred --------------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 75 --------------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 75 --------------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|.||||+|+..|+.++++++++
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 142 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE 142 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 27899999999999999998864
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.85 E-value=4.3e-21 Score=114.57 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=70.6
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCC-CcHHHHHHHhCCHHHHHHHHHhcCCc----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDG-MAPIHAAAQMGCLSCLKWMLYEACNI----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~ll~~g~~~----~~ 76 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..+..| .||||+|+..++.+++++|+++|.+. .|
T Consensus 83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g 161 (285)
T 3kea_A 83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL 161 (285)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTH
T ss_pred HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCC
Confidence 356777777777778888888777788877774 6777777777777 67777777777777777777777665 56
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~ 182 (285)
T 3kea_A 162 LSCIHITIKNGHVDMMILLLD 182 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHcChHHHHHHHHH
Confidence 677777777777777776653
No 58
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=9.4e-21 Score=113.06 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=53.0
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc----ccch
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI----FKLT 78 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~----~~~t 78 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.|+++ .|.|
T Consensus 81 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 159 (285)
T 3d9h_A 81 QGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS 159 (285)
T ss_dssp TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSC
T ss_pred CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCC
Confidence 34555555555666666666666666666553 555555555555666666666666666666665555544 3455
Q ss_pred HHHHHHhhCchhhhhhhh
Q psy14144 79 ACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~ 96 (100)
|||+|+..|+.+++++++
T Consensus 160 ~L~~A~~~g~~~~v~~Ll 177 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLI 177 (285)
T ss_dssp HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 555555555555555544
No 59
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.84 E-value=2.1e-20 Score=107.83 Aligned_cols=91 Identities=22% Similarity=0.229 Sum_probs=76.2
Q ss_pred CCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhc-CCc-----ccch
Q psy14144 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEA-CNI-----FKLT 78 (100)
Q Consensus 5 ~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g-~~~-----~~~t 78 (100)
.+++..|..|.||||+|+..++.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|++.| .++ .|.|
T Consensus 98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t 176 (228)
T 2dzn_A 98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176 (228)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC
T ss_pred cccccCCcCCCCHHHHHHHcCCHhHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC
Confidence 677788888888888888888888888884 788888888888888888888888888888888888 544 5788
Q ss_pred HHHHHHhhCchhhhhhhh
Q psy14144 79 ACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~ 96 (100)
|||+|+..|+.+++++++
T Consensus 177 ~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 177 PLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 888888888888888776
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=3.2e-20 Score=107.78 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=56.8
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCC------cccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS------LYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI- 74 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~- 74 (100)
.+|++++.+|..|.||||+|+..|+.+++++|+ ..+++ ....+..|.||||+|+..++.+++++|++.|+++
T Consensus 66 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 66 GAGCDPELRDFRGNTPLHLACEQGCLASVGVLT-QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp SCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHH-HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 455666666666666666666666666666663 54443 2334555666666666666666666666666544
Q ss_pred -----ccchHHHHHHhhCchhhhhhhh
Q psy14144 75 -----FKLTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 75 -----~~~t~l~~a~~~~~~~~~~~~~ 96 (100)
.|.||||+|+..|+.+++++++
T Consensus 145 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll 171 (236)
T 1ikn_D 145 AQEPCNGRTALHLAVDLQNPDLVSLLL 171 (236)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3556666666666666666554
No 61
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.84 E-value=1.7e-20 Score=108.47 Aligned_cols=91 Identities=19% Similarity=0.238 Sum_probs=39.2
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
|++++.+|..|.||||+|+..++.+++++|+ ..+++++..+..|.||+|+|+..++.+++++|+++|+++ .|.|
T Consensus 96 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 174 (231)
T 3aji_A 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNT 174 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCC
Confidence 3344444444444444444444444444442 344444444444444444444444444444444444333 2344
Q ss_pred HHHHHHhhCchhhhhhh
Q psy14144 79 ACIILSHYNIIRRRRVV 95 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~ 95 (100)
|||+|+..++.++++++
T Consensus 175 ~L~~A~~~~~~~~v~~L 191 (231)
T 3aji_A 175 PLHLACDEERVEEAKFL 191 (231)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHH
Confidence 44444444444444443
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=1.1e-20 Score=110.33 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=78.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+|++++.. ..|.||||+|+..|+.++++.|+ ..+++++..|..|.||||+|+..++.+++++|+++|+++ .|
T Consensus 26 ~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 103 (239)
T 1ycs_B 26 AHGMRVKFN-PLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG 103 (239)
T ss_dssp ------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTC
T ss_pred ccCCCcccC-chhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 467777654 56899999999999999999994 999999999999999999999999999999999999877 58
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 104 ~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 104 WTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 899999999999999998864
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=1.4e-20 Score=117.44 Aligned_cols=93 Identities=22% Similarity=0.290 Sum_probs=53.3
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|..+..|.||||+|+..|+.+++++|+ ..|++++..+..|.||||.|+..|+.+++++|+++|+++ .|.
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHH-HTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 45666666666666666666666666666663 666666666666666666666666666666666666554 356
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||||+|+..|+.+++++++
T Consensus 82 t~L~~A~~~g~~~~v~~Ll 100 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLL 100 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHH
Confidence 6666666666666666654
No 64
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.84 E-value=1.6e-20 Score=110.97 Aligned_cols=90 Identities=19% Similarity=0.169 Sum_probs=82.6
Q ss_pred CccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCC---cccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGS---LYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 7 ~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
++.+|..|.||||+|+..|+.+++++|+ ..+++ ++..+..|.||||+|+..++.+++++|+++|+++ .|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLL-GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHH-HHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 4678999999999999999999999995 88887 6777889999999999999999999999999877 5899
Q ss_pred HHHHHHhhCchhhhhhhhe
Q psy14144 79 ACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~~~ 97 (100)
|||+|+..|+.+++++++.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~ 99 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQ 99 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSS
T ss_pred HHHHHHHcCCcchhHhhhc
Confidence 9999999999999998875
No 65
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=1.9e-20 Score=108.33 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=83.8
Q ss_pred ccCCCccCCC-------------CCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHH----H
Q psy14144 3 YEMSANSQMD-------------NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCL----K 65 (100)
Q Consensus 3 ~~~~~n~~~~-------------~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~----~ 65 (100)
+|++++..+. .|.||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..++.+++ +
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~ 175 (232)
T 2rfa_A 97 RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLI-EHGADIRAQDSLGNTVLHILILQPNKTFACQMYN 175 (232)
T ss_dssp TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHH
T ss_pred CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHH
Confidence 4666666554 7999999999999999999995 89999999999999999999999999988 9
Q ss_pred HHHHhcCCc-----------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 66 WMLYEACNI-----------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 66 ~ll~~g~~~-----------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
+|++.|++. .|.|||++|+..|+.++++++++
T Consensus 176 ~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 176 LLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp HHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999988743 58999999999999999998875
No 66
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.84 E-value=2.9e-20 Score=107.46 Aligned_cols=93 Identities=20% Similarity=0.270 Sum_probs=61.1
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|++++.+|..|.||||+|+..|+.+++++|+ ..+++++.++..|.||+|+|+..++.+++++|++.|+++ .+.
T Consensus 62 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 140 (231)
T 3aji_A 62 LGVPVNDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140 (231)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 45666666666666666666666666666663 666666666666666666666666666666666666554 356
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||||+|+..|+.+++++++
T Consensus 141 t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHH
Confidence 6777777766666666654
No 67
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=3.7e-20 Score=105.07 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=54.2
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhC-CCcccccCCCCcHHHHHHHhCC-----HHHHHHHHHhcCCc---
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQMGC-----LSCLKWMLYEACNI--- 74 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~-~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~ll~~g~~~--- 74 (100)
+.+++..|..|.||||+|+..|+.+++++|+ ..+ ++++.++..|.||+|+|+..+. .+++++|++.|+++
T Consensus 96 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 96 TPDLNKHNRYGGNALIPAAEKGHIDNVKLLL-EDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH-HHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred CcccccccCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 3455555555666666666666666666653 444 5555555566666666665555 56666666665554
Q ss_pred --ccchHHHHHHhhCchhhhhhhh
Q psy14144 75 --FKLTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 75 --~~~t~l~~a~~~~~~~~~~~~~ 96 (100)
.|.||+++|+..|+.++++++.
T Consensus 175 ~~~g~t~l~~A~~~~~~~~~~~Ll 198 (201)
T 3hra_A 175 DNSGRTAMDYANQKGYTEISKILA 198 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHhHHHHHH
Confidence 3556666666666666666554
No 68
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.6e-20 Score=110.19 Aligned_cols=91 Identities=18% Similarity=0.216 Sum_probs=61.3
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHH
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTAC 80 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l 80 (100)
+++..+..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|.|||
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL 194 (253)
T 1yyh_A 116 DLDARMHDGTTPLILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 194 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCSSHHHHHH-HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CccccCCCCCcHHHHHHHcChHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 55566666666666666666666666663 666666666666777777777777777777777776655 466777
Q ss_pred HHHHhhCchhhhhhhhe
Q psy14144 81 IILSHYNIIRRRRVVFK 97 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~~ 97 (100)
|+|+..|+.++++++++
T Consensus 195 ~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 195 FLAAREGSYETAKVLLD 211 (253)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 77777777777766653
No 69
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=5.9e-21 Score=110.80 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=61.0
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc-CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchH
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTA 79 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~ 79 (100)
+++..|..|.||||+|+..|+.+++++|+ ..+++++..+ ..|.||+|+|+..++.+++++|+++|+++ .|.||
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 186 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLL-ERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 186 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBH
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHH-HcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 56666666777777777777777777763 6666666665 56677777777777777777777766655 45677
Q ss_pred HHHHHhhCchhhhhhhh
Q psy14144 80 CIILSHYNIIRRRRVVF 96 (100)
Q Consensus 80 l~~a~~~~~~~~~~~~~ 96 (100)
||+|+..|+.+++++++
T Consensus 187 L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 187 LHSASGRGLLPLVRTLV 203 (241)
T ss_dssp HHHHHHHTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHH
Confidence 77777777777666654
No 70
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.83 E-value=6.5e-20 Score=104.07 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=74.1
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHh-cCCc-----ccc
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYE-ACNI-----FKL 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-g~~~-----~~~ 77 (100)
+.++|..|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|++. +.++ .|.
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (201)
T 3hra_A 29 TYQVDEVDTEGNTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGG 107 (201)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCC
Confidence 3478888888888888888888888888884 78888888888888888888888888888888854 3333 577
Q ss_pred hHHHHHHhhCchhhhhhhhe
Q psy14144 78 TACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~~ 97 (100)
||||+|+..|+.++++++++
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~ 127 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLE 127 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHH
Confidence 88888888888888887764
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.83 E-value=1.1e-20 Score=112.72 Aligned_cols=92 Identities=21% Similarity=0.277 Sum_probs=68.5
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|..|..|.||||+|+..|+.+++++|+ ..|++++..+..|.||||+|+..++.+++++|+++|+++ .|.
T Consensus 62 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 140 (299)
T 1s70_B 62 RGADINYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD 140 (299)
T ss_dssp HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 46777777777777777777777777777774 777777777777777777777777777777777777655 467
Q ss_pred hHHHHHHhhCchhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVV 95 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~ 95 (100)
||+++|+..+..++++.+
T Consensus 141 t~l~~A~~~~~~~~~~~l 158 (299)
T 1s70_B 141 TPLDIAEEEAMEELLQNE 158 (299)
T ss_dssp CHHHHCCSHHHHHHHHHH
T ss_pred CHHHHHHhcchHHHHHHH
Confidence 777777777776666544
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=8e-20 Score=106.30 Aligned_cols=95 Identities=17% Similarity=0.117 Sum_probs=82.4
Q ss_pred CccCCCccCC---CCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc----
Q psy14144 2 TYEMSANSQM---DNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI---- 74 (100)
Q Consensus 2 ~~~~~~n~~~---~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~---- 74 (100)
..|++++..+ ..+.||||+|+..|+.++++.|+ ..|++++..+..|+||||+|+..++.+++++|++.|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d 84 (229)
T 2vge_A 6 RKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAV-KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD 84 (229)
T ss_dssp ----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ccCCCCccccccccchhHHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 4566666544 45678899999999999999995 899999999999999999999999999999999999877
Q ss_pred -ccchHHHHHHhhCchhhhhhhhe
Q psy14144 75 -FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 75 -~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|.||||+|+..|+.++++++++
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~ 108 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQ 108 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 58999999999999999998875
No 73
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=6.2e-20 Score=105.58 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHH
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTAC 80 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l 80 (100)
+++..+..|.||||+|+..++.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.|+++ .|.|||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 162 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 162 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHH-HcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHH
Confidence 44455555555555555555555555553 555555555555556666666555555666655555544 345666
Q ss_pred HHHHhhCchhhhhhhh
Q psy14144 81 IILSHYNIIRRRRVVF 96 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~ 96 (100)
|+|+..|+.+++++++
T Consensus 163 ~~A~~~~~~~~v~~Ll 178 (223)
T 2f8y_A 163 FLAAREGSYETAKVLL 178 (223)
T ss_dssp HHHHHHTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH
Confidence 6666666665555554
No 74
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=4e-20 Score=99.72 Aligned_cols=86 Identities=16% Similarity=0.282 Sum_probs=79.1
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHh
Q psy14144 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSH 85 (100)
Q Consensus 11 ~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~ 85 (100)
...+.||||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..++.+++++|++.|+++ +|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 445789999999999999999995 899999999999999999999999999999999999876 58899999999
Q ss_pred hCchhhhhhhhe
Q psy14144 86 YNIIRRRRVVFK 97 (100)
Q Consensus 86 ~~~~~~~~~~~~ 97 (100)
.|+.+++++++.
T Consensus 90 ~~~~~~v~~Ll~ 101 (136)
T 2jab_A 90 IGHLEIAEVLLK 101 (136)
T ss_dssp HTCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 999999998864
No 75
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=4.1e-20 Score=115.26 Aligned_cols=91 Identities=21% Similarity=0.363 Sum_probs=40.5
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT 78 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t 78 (100)
|+++|..+..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++ .|.|
T Consensus 268 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t 346 (437)
T 1n11_A 268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLI-KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS 346 (437)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-hCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 3444444444444444444444444444442 444444444444444444444444444444444444433 2344
Q ss_pred HHHHHHhhCchhhhhhh
Q psy14144 79 ACIILSHYNIIRRRRVV 95 (100)
Q Consensus 79 ~l~~a~~~~~~~~~~~~ 95 (100)
|||+|+..|+.++++++
T Consensus 347 ~L~~A~~~g~~~iv~~L 363 (437)
T 1n11_A 347 PLHQAAQQGHTDIVTLL 363 (437)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHCChHHHHHHH
Confidence 44444444444444443
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=1.7e-20 Score=112.00 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=48.9
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc-c
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK-L 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~-~ 77 (100)
|+++|..| |.||||+|+..|+.+++++|+ ..|++++..+..|.||||+|+..++.+++++|+++|+++ .| .
T Consensus 54 g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~ 130 (285)
T 3kea_A 54 GALKNLLE--NEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWK 130 (285)
T ss_dssp TGGGSCCT--TCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGG
T ss_pred CCCCCCCC--CCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCC
Confidence 44444442 455555555555555555553 555555555555555555555555555555555555544 23 4
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||||+|+..|+.+++++++
T Consensus 131 t~L~~A~~~~~~~~v~~Ll 149 (285)
T 3kea_A 131 TSFYHAVMLNDVSIVSYFL 149 (285)
T ss_dssp SHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHH
Confidence 5565555555555555544
No 77
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=1.1e-19 Score=105.38 Aligned_cols=91 Identities=23% Similarity=0.357 Sum_probs=51.4
Q ss_pred CCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchH
Q psy14144 5 MSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTA 79 (100)
Q Consensus 5 ~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~ 79 (100)
.+++..+..|.||||+|+..++.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|++.|+++ .|.||
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 180 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLL-SKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSP 180 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCH
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 445555555555555555555555555553 555555555555555555555555555555555555544 34556
Q ss_pred HHHHHhhCchhhhhhhh
Q psy14144 80 CIILSHYNIIRRRRVVF 96 (100)
Q Consensus 80 l~~a~~~~~~~~~~~~~ 96 (100)
||+|+..++.+++++++
T Consensus 181 L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 181 LHIAARENRYDCVVLFL 197 (237)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCHhHHHHHH
Confidence 66666666555555544
No 78
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.82 E-value=3.5e-20 Score=112.49 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=83.1
Q ss_pred CccCCCcc-CCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCC---HHHHHHHHHhc-CCc--
Q psy14144 2 TYEMSANS-QMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC---LSCLKWMLYEA-CNI-- 74 (100)
Q Consensus 2 ~~~~~~n~-~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll~~g-~~~-- 74 (100)
..|+++|. +|..|.||||+|+..|+.+++++|+ +.|++++.++..|+||||+|+..++ .+.++.|++.+ .++
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~ 196 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 196 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC
Confidence 46889999 8999999999999999999999995 9999999999999999999999988 56666666665 323
Q ss_pred ---ccchHHHHHHh----hCchhhhhhhhe
Q psy14144 75 ---FKLTACIILSH----YNIIRRRRVVFK 97 (100)
Q Consensus 75 ---~~~t~l~~a~~----~~~~~~~~~~~~ 97 (100)
.|.||||+|+. .|+.++++++++
T Consensus 197 ~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~ 226 (327)
T 1sw6_A 197 EDSMNRTILHHIIITSGMTGCSAAAKYYLD 226 (327)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHccccccHHHHHHHHH
Confidence 78999999999 889999988764
No 79
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.82 E-value=1.1e-19 Score=106.84 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=78.4
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc--------------CCCCcHHHHHHHhCCHHHHHHHHH--
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA--------------KDGMAPIHAAAQMGCLSCLKWMLY-- 69 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~ll~-- 69 (100)
..+..|..|.||||+|+..|+.+++++|+ +.|++++..+ ..|.||||+|+..++.+++++|++
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLV-EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHH-hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 34555668999999999999999999995 8999999887 579999999999999999999999
Q ss_pred -hcCCc-----ccchHHHHHHhhCc---------hhhhhhhh
Q psy14144 70 -EACNI-----FKLTACIILSHYNI---------IRRRRVVF 96 (100)
Q Consensus 70 -~g~~~-----~~~t~l~~a~~~~~---------~~~~~~~~ 96 (100)
.|+++ .|.||||+|+..++ .+++++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll 205 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLL 205 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 88877 68999999998777 46666654
No 80
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=1.2e-19 Score=107.13 Aligned_cols=95 Identities=23% Similarity=0.375 Sum_probs=87.1
Q ss_pred CccCCCccC-CCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 2 TYEMSANSQ-MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 2 ~~~~~~n~~-~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
.+|.++|.. +..|.||||+|+..|+.+++++|+ +.+++++..+..|.||+|+|+..++.+++++|++.|+++ .
T Consensus 26 ~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (285)
T 1wdy_A 26 EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY 104 (285)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc
Confidence 357888888 778999999999999999999995 899999999999999999999999999999999999877 5
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.|||++|+..|+.+++++++.
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~ 126 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYK 126 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHhCCHHHHHHHHH
Confidence 7899999999999999988764
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.82 E-value=6.3e-20 Score=112.98 Aligned_cols=87 Identities=21% Similarity=0.250 Sum_probs=80.4
Q ss_pred CCCCCchHHHHHHHhCCHHHHHHHHHhhC-CCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHH
Q psy14144 10 QMDNDVTPVYLAAQEGHLEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIIL 83 (100)
Q Consensus 10 ~~~~g~t~l~~a~~~g~~~~~~~l~~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a 83 (100)
.|..|.||||+|+..|+.+++++|+ ..+ ++++..|..|.||||+|+..++.+++++|+++|+++ .|.|||++|
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll-~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLV-GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHH-HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHH-HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 6778999999999999999999996 554 999999999999999999999999999999999877 588999999
Q ss_pred HhhCchhhhhhhhe
Q psy14144 84 SHYNIIRRRRVVFK 97 (100)
Q Consensus 84 ~~~~~~~~~~~~~~ 97 (100)
+..|+.++++++..
T Consensus 354 ~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 354 QANNHHNIVDIFDR 367 (373)
T ss_dssp HHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHh
Confidence 99999999998864
No 82
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=1.1e-19 Score=108.43 Aligned_cols=95 Identities=20% Similarity=0.283 Sum_probs=82.1
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc------------------------------------
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA------------------------------------ 45 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~------------------------------------ 45 (100)
.+|+++|..|..|.||||+|+..|+.+++++|+ ..|++++..+
T Consensus 94 ~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 172 (299)
T 1s70_B 94 ENGANINQPDNEGWIPLHAAASCGYLDIAEYLI-SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKE 172 (299)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhh
Confidence 468899999999999999999999999999995 8888765543
Q ss_pred ------------------------CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHhhCchhhhhhhh
Q psy14144 46 ------------------------KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 46 ------------------------~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~~~~~~~~~~~~ 96 (100)
..|.||||+|+..++.+++++|++.|+++ .|.||||+|+..|+.+++++++
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 252 (299)
T 1s70_B 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV 252 (299)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHH
Confidence 34778889999999999999999998877 5789999999999999998886
Q ss_pred e
Q psy14144 97 K 97 (100)
Q Consensus 97 ~ 97 (100)
.
T Consensus 253 ~ 253 (299)
T 1s70_B 253 E 253 (299)
T ss_dssp H
T ss_pred H
Confidence 4
No 83
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=6.1e-20 Score=106.62 Aligned_cols=90 Identities=16% Similarity=0.179 Sum_probs=83.6
Q ss_pred CccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccC-CCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHH
Q psy14144 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTAC 80 (100)
Q Consensus 7 ~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l 80 (100)
++..+..|.||||+|+..|+.+++++|+ ..|++++..+. .|.||||+|+..++.+++++|+++|+++ .|.||+
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLV-SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 188 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGG
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHH
Confidence 5677888999999999999999999995 99999999887 9999999999999999999999999877 589999
Q ss_pred HHHHhhCchhhhhhhhe
Q psy14144 81 IILSHYNIIRRRRVVFK 97 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~~ 97 (100)
++|+..++.+++++++.
T Consensus 189 ~~A~~~~~~~~~~~Ll~ 205 (236)
T 1ikn_D 189 QLTWGRPSTRIQQQLGQ 205 (236)
T ss_dssp GGCTTSSCHHHHHHHHT
T ss_pred HHHHccCchHHHHHHHH
Confidence 99999999999998865
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=2.2e-19 Score=95.04 Aligned_cols=84 Identities=32% Similarity=0.523 Sum_probs=78.2
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHhhC
Q psy14144 13 NDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSHYN 87 (100)
Q Consensus 13 ~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~~~ 87 (100)
+|.||||+|+..|+.+++++|+ ..+++++..+..|.||+|.|+..++.+++++|++.|+++ .|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999995 899999989999999999999999999999999999876 5789999999999
Q ss_pred chhhhhhhhe
Q psy14144 88 IIRRRRVVFK 97 (100)
Q Consensus 88 ~~~~~~~~~~ 97 (100)
+.+++++++.
T Consensus 80 ~~~~~~~Ll~ 89 (126)
T 1n0r_A 80 HLEVVKLLLE 89 (126)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9999998764
No 85
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=1.9e-19 Score=107.39 Aligned_cols=91 Identities=22% Similarity=0.259 Sum_probs=84.1
Q ss_pred CCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHH
Q psy14144 6 SANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTAC 80 (100)
Q Consensus 6 ~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l 80 (100)
..+.+|..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.|+++ .|.|||
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 35677889999999999999999999995 899999999999999999999999999999999999877 588999
Q ss_pred HHHHhhCchhhhhhhhe
Q psy14144 81 IILSHYNIIRRRRVVFK 97 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~~ 97 (100)
++|+..|+.+++++++.
T Consensus 130 ~~A~~~~~~~~v~~Ll~ 146 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQ 146 (285)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHH
Confidence 99999999999998864
No 86
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=106.53 Aligned_cols=92 Identities=21% Similarity=0.275 Sum_probs=55.4
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ +.+++++. +..|.||+|.|+..++.+++++|++.|+++ .|.
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (261)
T 2xai_A 58 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG 135 (261)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTB
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCC
Confidence 45666666666666666666666666666663 56655543 334566666666666666666666665544 345
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
||||+|+..|+.+++++++
T Consensus 136 t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLL 154 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHH
Confidence 6666666666665555544
No 87
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.81 E-value=2.9e-19 Score=103.59 Aligned_cols=92 Identities=22% Similarity=0.401 Sum_probs=43.9
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhc-CCc-----ccc
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEA-CNI-----FKL 77 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g-~~~-----~~~ 77 (100)
|++++..+..|.||||+|+..|+.+++++|+ ..+++++..+..|.||+|+|+..++.+++++|++.| .++ .|.
T Consensus 34 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 112 (237)
T 3b7b_A 34 GANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW 112 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSC
T ss_pred CCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Confidence 4444444444445555555555555555442 444444444444455555555555555555554444 222 344
Q ss_pred hHHHHHHhhCchhhhhhhh
Q psy14144 78 TACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 78 t~l~~a~~~~~~~~~~~~~ 96 (100)
|||++|+..++.+++++++
T Consensus 113 t~L~~A~~~~~~~~~~~Ll 131 (237)
T 3b7b_A 113 TPMIWATEYKHVDLVKLLL 131 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHH
Confidence 5555555555555444443
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=2.7e-20 Score=107.41 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=80.4
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHh-cCCc-----ccchHHHH
Q psy14144 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYE-ACNI-----FKLTACII 82 (100)
Q Consensus 9 ~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-g~~~-----~~~t~l~~ 82 (100)
..+..|.||||+|+..|+.++++.|+ ..+++++..+..|+||||+|+..++.+++++|++. |+++ .|.||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred ccccccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 34556789999999999999999995 89999999999999999999999999999999998 8766 68999999
Q ss_pred HHhhCchhhhhhhhe
Q psy14144 83 LSHYNIIRRRRVVFK 97 (100)
Q Consensus 83 a~~~~~~~~~~~~~~ 97 (100)
|+..|+.+++++++.
T Consensus 147 A~~~~~~~~v~~Ll~ 161 (222)
T 3ehr_A 147 AAWKGYADIVQLLLA 161 (222)
T ss_dssp HHHHTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 999999999998874
No 89
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.3e-19 Score=92.05 Aligned_cols=71 Identities=38% Similarity=0.583 Sum_probs=67.0
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCC
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACN 73 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~ 73 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|.||+|+|+..++.+++++|+++|++
T Consensus 23 ~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 23 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 468999999999999999999999999999995 89999999999999999999999999999999999874
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=112.50 Aligned_cols=86 Identities=12% Similarity=0.058 Sum_probs=73.8
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCcccchHHH
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNIFKLTACI 81 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~~~~t~l~ 81 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++..|..|.|||++|+..++.+++++|++.|++ .+.||||
T Consensus 214 ~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-~g~tpLh 291 (301)
T 2b0o_E 214 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-TFAFPLH 291 (301)
T ss_dssp HHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-TTSSCCC
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-CCCChhH
Confidence 468999999999999999999999999999995 89999999999999999999999999999999999887 5789999
Q ss_pred HHHhhCch
Q psy14144 82 ILSHYNII 89 (100)
Q Consensus 82 ~a~~~~~~ 89 (100)
+|+..|..
T Consensus 292 ~A~~~g~~ 299 (301)
T 2b0o_E 292 VDYSWVIS 299 (301)
T ss_dssp --------
T ss_pred HHHhcCCc
Confidence 99998764
No 91
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=3.5e-19 Score=103.31 Aligned_cols=93 Identities=22% Similarity=0.233 Sum_probs=62.5
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcC----Cc----
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEAC----NI---- 74 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~----~~---- 74 (100)
.|.++|.+|..|.||||+|+..|+.+++++|+ +.|++++..+..|.||+|+|+..++.+++++|++.+. ++
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 113 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN 113 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC
Confidence 45666667777777777777777777777773 6677666666667777777777777777777776654 22
Q ss_pred -ccchHHHHHHhhCchhhhhhhh
Q psy14144 75 -FKLTACIILSHYNIIRRRRVVF 96 (100)
Q Consensus 75 -~~~t~l~~a~~~~~~~~~~~~~ 96 (100)
.|.||||+|+..++.+++++++
T Consensus 114 ~~g~t~L~~A~~~~~~~~~~~Ll 136 (241)
T 1k1a_A 114 YDGLTALHVAVNTECQETVQLLL 136 (241)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHH
Confidence 4566666666666666666654
No 92
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=3.8e-19 Score=105.23 Aligned_cols=87 Identities=20% Similarity=0.237 Sum_probs=77.3
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccC--------------CCCcHHHHHHHhCCHHHHHHHHH---hc
Q psy14144 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAK--------------DGMAPIHAAAQMGCLSCLKWMLY---EA 71 (100)
Q Consensus 9 ~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~ll~---~g 71 (100)
..|..|.||||+|+..|+.+++++|+ +.|++++..+. .|.||||+|+..++.+++++|++ .|
T Consensus 96 ~~d~~g~tpL~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 174 (273)
T 2pnn_A 96 DSYYKGQTALHIAIERRNMTLVTLLV-ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP 174 (273)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccCCCCCHHHHHHHcCCHHHHHHHH-HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC
Confidence 35678999999999999999999995 89999988876 79999999999999999999999 88
Q ss_pred CCc-----ccchHHHHHHhhCc---------hhhhhhhh
Q psy14144 72 CNI-----FKLTACIILSHYNI---------IRRRRVVF 96 (100)
Q Consensus 72 ~~~-----~~~t~l~~a~~~~~---------~~~~~~~~ 96 (100)
+++ +|.||||+|+..++ .+++++++
T Consensus 175 ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll 213 (273)
T 2pnn_A 175 ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213 (273)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH
Confidence 877 68999999999887 56666654
No 93
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.81 E-value=2.2e-19 Score=103.53 Aligned_cols=92 Identities=16% Similarity=0.238 Sum_probs=66.6
Q ss_pred CCCcc-CCCCCchHHHHHHHhCCHHHHHHHHHhhC--CCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----cc
Q psy14144 5 MSANS-QMDNDVTPVYLAAQEGHLEVLKFLVLEAG--GSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FK 76 (100)
Q Consensus 5 ~~~n~-~~~~g~t~l~~a~~~g~~~~~~~l~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~ 76 (100)
.+++. .+..|.||||+|+..|+.+++++|+ ..+ ++++..+..|.||+|.|+..++.+++++|++.|+++ .|
T Consensus 62 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 140 (228)
T 2dzn_A 62 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLY-DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFN 140 (228)
T ss_dssp CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH-SSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred ccccccCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCC
Confidence 34444 5667777777777777777777774 666 666666777777777777777777777777777665 46
Q ss_pred chHHHHHHhhCchhhhhhhhe
Q psy14144 77 LTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 77 ~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.||||+|+..|+.+++++++.
T Consensus 141 ~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 141 QIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHh
Confidence 778888888887777777654
No 94
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=4.6e-19 Score=103.99 Aligned_cols=87 Identities=20% Similarity=0.244 Sum_probs=77.0
Q ss_pred CCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCC-------------CCcHHHHHHHhCCHHHHHHHHH---hcCC
Q psy14144 10 QMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKD-------------GMAPIHAAAQMGCLSCLKWMLY---EACN 73 (100)
Q Consensus 10 ~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~-------------g~t~l~~a~~~~~~~~~~~ll~---~g~~ 73 (100)
.|..|.||||+|+..|+.+++++|+ +.|++++..+.. |.||||+|+..++.+++++|++ .|++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLV-ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 4567999999999999999999995 899999888776 9999999999999999999999 8887
Q ss_pred c-----ccchHHHHHHh--hCchh-------hhhhhhe
Q psy14144 74 I-----FKLTACIILSH--YNIIR-------RRRVVFK 97 (100)
Q Consensus 74 ~-----~~~t~l~~a~~--~~~~~-------~~~~~~~ 97 (100)
+ +|.||||+|+. .++.+ ++++++.
T Consensus 165 ~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 165 LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence 7 68999999999 77777 7776653
No 95
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=1e-19 Score=111.30 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=82.4
Q ss_pred cCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc---ccchHH
Q psy14144 4 EMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI---FKLTAC 80 (100)
Q Consensus 4 ~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~---~~~t~l 80 (100)
+.+++..|..|.||||+|+..|+.+++++|+ ..|++++..+..|.||||+|+..++.+++++|++.|+++ +|.|||
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L 88 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPI 88 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHH
Confidence 4567778889999999999999999999995 899999999999999999999999999999999999877 679999
Q ss_pred HHHHhhCchhhhhhhhe
Q psy14144 81 IILSHYNIIRRRRVVFK 97 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~~ 97 (100)
++|+..|+.+++++++.
T Consensus 89 ~~A~~~g~~~~v~~Ll~ 105 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVE 105 (364)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 99999999999998875
No 96
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.80 E-value=3e-19 Score=108.35 Aligned_cols=95 Identities=18% Similarity=0.190 Sum_probs=80.7
Q ss_pred CccCCCccCCC-CCchHHHHHHHhCCHHHHHHHHHhhCCCc---------------------------------ccccCC
Q psy14144 2 TYEMSANSQMD-NDVTPVYLAAQEGHLEVLKFLVLEAGGSL---------------------------------YVRAKD 47 (100)
Q Consensus 2 ~~~~~~n~~~~-~g~t~l~~a~~~g~~~~~~~l~~~~~~~~---------------------------------~~~~~~ 47 (100)
.+|+++|.++. .|.||||+|+..|+.+++++|+ +.|+++ +..+..
T Consensus 46 ~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (337)
T 4g8k_A 46 EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFY 124 (337)
T ss_dssp HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTT
T ss_pred HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHH-HcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccC
Confidence 46899998875 5899999999999999999995 777654 345667
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcCCc---------------ccchHHHHHHhhCchhhhhhhhe
Q psy14144 48 GMAPIHAAAQMGCLSCLKWMLYEACNI---------------FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 48 g~t~l~~a~~~~~~~~~~~ll~~g~~~---------------~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||+++|+..++.+++++++++|+++ .|.||||+|+..|+.+++++++.
T Consensus 125 g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~ 189 (337)
T 4g8k_A 125 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 189 (337)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHh
Confidence 889999999999999999999998765 36899999999999999998863
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=8.4e-20 Score=102.79 Aligned_cols=85 Identities=18% Similarity=0.233 Sum_probs=78.4
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc------ccchHHHHHH
Q psy14144 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI------FKLTACIILS 84 (100)
Q Consensus 11 ~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~------~~~t~l~~a~ 84 (100)
+..|.||||+|+..|+.++++.|+ . +++++..+..|+||||+|+..++.+++++|+++|+++ +|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll-~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLL-E-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHT-T-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-h-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 457899999999999999999995 6 9999999999999999999999999999999999876 4789999999
Q ss_pred hhCchhhhhhhhe
Q psy14144 85 HYNIIRRRRVVFK 97 (100)
Q Consensus 85 ~~~~~~~~~~~~~ 97 (100)
..|+.+++++++.
T Consensus 119 ~~~~~~~v~~Ll~ 131 (183)
T 3deo_A 119 GYVRPEVVEALVE 131 (183)
T ss_dssp HTTCHHHHHHHHH
T ss_pred hcCcHHHHHHHHH
Confidence 9999999998864
No 98
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=1.5e-19 Score=111.34 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=86.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhc---CCc----
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEA---CNI---- 74 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g---~~~---- 74 (100)
..|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..+..|.||||+|+..++.+++++|++.+ .++
T Consensus 154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLM-KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHH-HCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC
Confidence 468999999999999999999999999999995 899999999999999999999999999999999876 343
Q ss_pred -ccchHHHHHHhhC---chhhhhhhhe
Q psy14144 75 -FKLTACIILSHYN---IIRRRRVVFK 97 (100)
Q Consensus 75 -~~~t~l~~a~~~~---~~~~~~~~~~ 97 (100)
.|.||||+|+..+ +.+++++++.
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~ 259 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVE 259 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHH
Confidence 6899999999988 7888887764
No 99
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=7.7e-19 Score=103.67 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=85.3
Q ss_pred ccCCCccCCCCCchHHHHHHHhCC----HHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHH-hcCCc---
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGH----LEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLY-EACNI--- 74 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~----~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~-~g~~~--- 74 (100)
.|++++..|..|.||||+|+..++ .+++++|+ ..|++++.++..|.||+|+|+..++.+++++|++ .|+++
T Consensus 171 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~ 249 (285)
T 1wdy_A 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT 249 (285)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHH-HTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC
T ss_pred cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcccc
Confidence 388899999999999999999998 88999994 8999999999999999999999999999999999 67766
Q ss_pred --ccchHHHHHHhhCchhhhhhhhe
Q psy14144 75 --FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 75 --~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.|.|||++|+..|+.++++++++
T Consensus 250 ~~~g~t~l~~A~~~~~~~i~~~Ll~ 274 (285)
T 1wdy_A 250 DSDGKTALLLAVELKLKKIAELLCK 274 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCcHHHHHHHHH
Confidence 68899999999999999998864
No 100
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=107.84 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=71.2
Q ss_pred CccCCCCCchHHHHHHHhCCHHHHHHHHHhhCC-Cc--------------------------------------ccccCC
Q psy14144 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGG-SL--------------------------------------YVRAKD 47 (100)
Q Consensus 7 ~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~-~~--------------------------------------~~~~~~ 47 (100)
+|..|..|.||||+|+..|+.+++++|+ ..|+ ++ ...+..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLL-DSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 5666777777777777777777777774 5554 33 333456
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHHHhhCchhhhhhhhe
Q psy14144 48 GMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 48 g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|+||||+|+..++.+++++|++.|+++ +|.||||+|+..|+.+++++++.
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 889999999999999999999999877 58899999999999999998875
No 101
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.80 E-value=8.1e-20 Score=100.51 Aligned_cols=89 Identities=22% Similarity=0.265 Sum_probs=77.8
Q ss_pred CccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccch-HH
Q psy14144 7 ANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLT-AC 80 (100)
Q Consensus 7 ~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t-~l 80 (100)
.+..+..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+ .++.+++++|+++|+++ .|.| ||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPV 82 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 4456778999999999999999999995 889999999999999999985 89999999999999877 5778 99
Q ss_pred HHHHhhCchhhhhhhhe
Q psy14144 81 IILSHYNIIRRRRVVFK 97 (100)
Q Consensus 81 ~~a~~~~~~~~~~~~~~ 97 (100)
|+|+..|+.+++++++.
T Consensus 83 ~~A~~~~~~~~v~~Ll~ 99 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHR 99 (156)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 99999999999998874
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.79 E-value=4e-19 Score=104.09 Aligned_cols=85 Identities=18% Similarity=0.233 Sum_probs=78.3
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc------ccchHHHHHH
Q psy14144 11 MDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI------FKLTACIILS 84 (100)
Q Consensus 11 ~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~------~~~t~l~~a~ 84 (100)
+..|.||||+|+..|+.++++.|+ . +++++.++..|+||||+|+..++.+++++|+++|+++ .|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll-~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLL-E-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTT-T-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHH-c-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 346889999999999999999995 6 9999999999999999999999999999999999877 3789999999
Q ss_pred hhCchhhhhhhhe
Q psy14144 85 HYNIIRRRRVVFK 97 (100)
Q Consensus 85 ~~~~~~~~~~~~~ 97 (100)
..|+.+++++++.
T Consensus 120 ~~g~~~~v~~Ll~ 132 (244)
T 3ui2_A 120 GYVRPEVVEALVE 132 (244)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 9999999998864
No 103
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=2.4e-18 Score=99.51 Aligned_cols=95 Identities=13% Similarity=0.155 Sum_probs=75.6
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCccccc-CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRA-KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
..|++++..+..|.||||+|+..|+.+++++|+ ..+++....+ ..|.||+|.|+..++.+++++|++.|+++ .
T Consensus 30 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 108 (240)
T 3eu9_A 30 EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE 108 (240)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 357788888888888888888888888888884 7777666543 44888888888888888888888887766 4
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
+.||+++|+..|+.+++++++.
T Consensus 109 g~t~l~~A~~~~~~~~~~~Ll~ 130 (240)
T 3eu9_A 109 GCSCIHLAAQFGHTSIVAYLIA 130 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHh
Confidence 6788888888888888877754
No 104
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=1.6e-18 Score=104.91 Aligned_cols=80 Identities=23% Similarity=0.278 Sum_probs=51.5
Q ss_pred ccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccc
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKL 77 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~ 77 (100)
+|+++|.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|.||||+|+..++.+++++|+++|+++ .|.
T Consensus 236 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~ 314 (351)
T 3utm_A 236 KGANVNEKNKDFMTPLHVAAERAHNDVMEVLH-KHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF 314 (351)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 45566666666666666666666666666663 666666666666666666666666666666666666655 456
Q ss_pred hHHHHH
Q psy14144 78 TACIIL 83 (100)
Q Consensus 78 t~l~~a 83 (100)
||+++|
T Consensus 315 tal~~a 320 (351)
T 3utm_A 315 TAAQMG 320 (351)
T ss_dssp CHHHHS
T ss_pred Chhhhh
Confidence 666655
No 105
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.77 E-value=1.3e-19 Score=102.68 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=76.3
Q ss_pred CCCccCC-CCCchHHHHHHHhCCH----HHHHHHHHhhCCCcccccCCCCcHHHHHHHhCC------HHHHHHHHHhcCC
Q psy14144 5 MSANSQM-DNDVTPVYLAAQEGHL----EVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGC------LSCLKWMLYEACN 73 (100)
Q Consensus 5 ~~~n~~~-~~g~t~l~~a~~~g~~----~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~ll~~g~~ 73 (100)
.+++.++ ..|.||||+|+..++. +++++|+ ..|++++.++..|+||||+++..++ .+++++|+++|++
T Consensus 28 ~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad 106 (186)
T 3t8k_A 28 KGYEDKESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD 106 (186)
T ss_dssp HSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred cCcccccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC
Confidence 3456665 6799999999999975 4899995 9999999999999999999999987 5789999999998
Q ss_pred c-----ccc-hHHHHHHhhC-----chhhhhhhhe
Q psy14144 74 I-----FKL-TACIILSHYN-----IIRRRRVVFK 97 (100)
Q Consensus 74 ~-----~~~-t~l~~a~~~~-----~~~~~~~~~~ 97 (100)
+ .|. ||||+|+..+ ..+++++++.
T Consensus 107 in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 107 ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 8 578 9999999944 3456666553
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.77 E-value=1.8e-18 Score=100.00 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=59.8
Q ss_pred ccCCCccCCCCCchHHHHHHHhCC-HHHHHHHHHhhCCCcccccC-CCCcHHHHHHHhCCHHHHHHHHHhcCCc-----c
Q psy14144 3 YEMSANSQMDNDVTPVYLAAQEGH-LEVLKFLVLEAGGSLYVRAK-DGMAPIHAAAQMGCLSCLKWMLYEACNI-----F 75 (100)
Q Consensus 3 ~~~~~n~~~~~g~t~l~~a~~~g~-~~~~~~l~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~ 75 (100)
+|++++..+..|.||||+|+..++ .+++++| ...+++++..+. .|.||||.|+..++.+++++|++.|+++ .
T Consensus 131 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 209 (240)
T 3eu9_A 131 KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL-LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIK 209 (240)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH-HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTT
T ss_pred cCCCccccCCCCCcHHHHHHHhCChHHHHHHH-HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 345555555555555555554443 4555555 355555555554 6677777777777777777777777665 4
Q ss_pred cchHHHHHHhhCchhhhhhhhe
Q psy14144 76 KLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 76 ~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
|.||+++|+..|+.++++++++
T Consensus 210 g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 210 GESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHH
Confidence 6677777777777777776653
No 107
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=7.8e-19 Score=106.57 Aligned_cols=95 Identities=13% Similarity=0.017 Sum_probs=80.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCC---HHHHHHHHHhhC-CCcccccCCCCcHHHHHHH----hCCHHHHHHHHHhc--
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGH---LEVLKFLVLEAG-GSLYVRAKDGMAPIHAAAQ----MGCLSCLKWMLYEA-- 71 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~---~~~~~~l~~~~~-~~~~~~~~~g~t~l~~a~~----~~~~~~~~~ll~~g-- 71 (100)
.+|+++|.+|..|.||||+|+..|+ .+.++.|+ ..+ ++++..+..|+||||+|+. .++.+++++|++.+
T Consensus 152 ~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll-~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~ 230 (327)
T 1sw6_A 152 KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL-DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 230 (327)
T ss_dssp HTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH-HHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHH-HhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 4689999999999999999999988 57777775 444 6788889999999999998 88999999988763
Q ss_pred ---------------------------------------------CCc---ccchHHHHHHhhCchhhhhhhhe
Q psy14144 72 ---------------------------------------------CNI---FKLTACIILSHYNIIRRRRVVFK 97 (100)
Q Consensus 72 ---------------------------------------------~~~---~~~t~l~~a~~~~~~~~~~~~~~ 97 (100)
.+. +|.||||+|+..|+.++++++++
T Consensus 231 ~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 231 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp HHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred HHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 222 68999999999999999998864
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=3.9e-18 Score=89.42 Aligned_cols=73 Identities=29% Similarity=0.490 Sum_probs=69.1
Q ss_pred CCccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc
Q psy14144 1 MTYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI 74 (100)
Q Consensus 1 ~~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~ 74 (100)
+.+|+++|.+|..|.||||+|+..++.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++|+++
T Consensus 29 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 29 LSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp TTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT-TTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 4578999999999999999999999999999995 899999999999999999999999999999999999988
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=5.3e-18 Score=107.84 Aligned_cols=82 Identities=12% Similarity=0.096 Sum_probs=67.4
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCcccchHHH
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNIFKLTACI 81 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~~~~t~l~ 81 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..|..|.||||+|+..++.+++++|+++|++++. +|+|
T Consensus 195 ~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-~~~h 272 (497)
T 3lvq_E 195 QNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-FPLH 272 (497)
T ss_dssp HHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHH-HTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------
T ss_pred HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-Ccce
Confidence 468999999999999999999999999999995 99999999999999999999999999999999999998854 5777
Q ss_pred HHHh
Q psy14144 82 ILSH 85 (100)
Q Consensus 82 ~a~~ 85 (100)
.+..
T Consensus 273 ~~~~ 276 (497)
T 3lvq_E 273 VDYS 276 (497)
T ss_dssp ----
T ss_pred eecc
Confidence 6543
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.71 E-value=4e-17 Score=97.37 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=67.8
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI 74 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~ 74 (100)
.+|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 193 ~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 193 QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL-RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999995 899999999999999999999999999999999998753
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.70 E-value=6.6e-18 Score=104.43 Aligned_cols=87 Identities=21% Similarity=0.151 Sum_probs=69.9
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCc---ccccCCCCcHHHHHHHhCCHHHHHHHHHhcCCc-------ccch
Q psy14144 9 SQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSL---YVRAKDGMAPIHAAAQMGCLSCLKWMLYEACNI-------FKLT 78 (100)
Q Consensus 9 ~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-------~~~t 78 (100)
..+..|.||||+|+..|+.+++++|+ ..|+++ +..+.. .||||+|+..|+.+++++|+++|+++ .|.|
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll-~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~T 200 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 200 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHH-HSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHH-hCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCC
Confidence 33446788999999999999999995 888652 222333 89999999999999999999998873 4689
Q ss_pred HHHHHH-hhCchhhhhhhhe
Q psy14144 79 ACIILS-HYNIIRRRRVVFK 97 (100)
Q Consensus 79 ~l~~a~-~~~~~~~~~~~~~ 97 (100)
|||+|+ ..|+.+++++++.
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTT
T ss_pred HHHHHHHHCCCHHHHHHHHh
Confidence 999999 9999999988764
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.67 E-value=2.5e-16 Score=97.17 Aligned_cols=85 Identities=12% Similarity=0.092 Sum_probs=77.7
Q ss_pred CCCchHHHHHHHh-CCHHHHHHHHHhhCCCccccc--CCCCcHHHHHHHhCCHHHHHHHHHhcCCc-----ccchHHHHH
Q psy14144 12 DNDVTPVYLAAQE-GHLEVLKFLVLEAGGSLYVRA--KDGMAPIHAAAQMGCLSCLKWMLYEACNI-----FKLTACIIL 83 (100)
Q Consensus 12 ~~g~t~l~~a~~~-g~~~~~~~l~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~g~~~-----~~~t~l~~a 83 (100)
..+.|+||+|+.. ++.++++.|+ ..|++++..+ ..|.||||+|+..++.+++++|+++|+++ .|.||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3456899999999 9999999995 8999999887 78999999999999999999999999887 589999999
Q ss_pred HhhCchhhhhhhhe
Q psy14144 84 SHYNIIRRRRVVFK 97 (100)
Q Consensus 84 ~~~~~~~~~~~~~~ 97 (100)
+..|+.+++++++.
T Consensus 276 ~~~g~~~~v~~LL~ 289 (368)
T 3jue_A 276 TILGHTGLACLFLK 289 (368)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HHcCcHHHHHHHHH
Confidence 99999999998874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=4.9e-16 Score=81.01 Aligned_cols=65 Identities=29% Similarity=0.419 Sum_probs=60.9
Q ss_pred CccCCCccCCCCCchHHHHHHHhCCHHHHHHHHHhhCCCcccccCCCCcHHHHHHHhCCHHHHHHH
Q psy14144 2 TYEMSANSQMDNDVTPVYLAAQEGHLEVLKFLVLEAGGSLYVRAKDGMAPIHAAAQMGCLSCLKWM 67 (100)
Q Consensus 2 ~~~~~~n~~~~~g~t~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 67 (100)
..|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++..+..|+||+|+|+..++.+++++|
T Consensus 45 ~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 45 ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 368899999999999999999999999999995 89999999999999999999999999999876
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.64 E-value=4.7e-18 Score=105.11 Aligned_cols=80 Identities=21% Similarity=0.162 Sum_probs=73.1
Q ss_pred chHHHHHHHhCCHHHHHHHHHhhCCCccc--ccCCCCcHHHHHH-HhCCHHHHHHHHHhcCCcccchHHHHHHhhCchhh
Q psy14144 15 VTPVYLAAQEGHLEVLKFLVLEAGGSLYV--RAKDGMAPIHAAA-QMGCLSCLKWMLYEACNIFKLTACIILSHYNIIRR 91 (100)
Q Consensus 15 ~t~l~~a~~~g~~~~~~~l~~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~~~~ll~~g~~~~~~t~l~~a~~~~~~~~ 91 (100)
.||||+|+..|+.+++++|+ ..|+++.. .+..|.||||+|+ ..|+.+++++|++.|. .+.||+++|+..|+.++
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll-~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLC-ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--HHHHHHHCTTTTTTTTH
T ss_pred CCHHHHHHHCCCHHHHHHHH-HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--ccchHHHHHHHCCCHHH
Confidence 89999999999999999995 89998776 7888999999999 9999999999999775 48999999999999999
Q ss_pred hhhhhe
Q psy14144 92 RRVVFK 97 (100)
Q Consensus 92 ~~~~~~ 97 (100)
++++..
T Consensus 241 v~lL~~ 246 (376)
T 2aja_A 241 NPFIAR 246 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888754
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=62.52 E-value=7.7 Score=15.92 Aligned_cols=16 Identities=31% Similarity=0.409 Sum_probs=13.4
Q ss_pred HHHHHHhCCHHHHHHH
Q psy14144 18 VYLAAQEGHLEVLKFL 33 (100)
Q Consensus 18 l~~a~~~g~~~~~~~l 33 (100)
+..||..|+.+.++.|
T Consensus 17 iyvA~seGd~etv~~L 32 (40)
T 1gp8_A 17 MDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 5678889999999887
No 116
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=26.76 E-value=71 Score=16.31 Aligned_cols=23 Identities=9% Similarity=0.208 Sum_probs=14.0
Q ss_pred HHHHHHHHHhcCCcccchHHHHH
Q psy14144 61 LSCLKWMLYEACNIFKLTACIIL 83 (100)
Q Consensus 61 ~~~~~~ll~~g~~~~~~t~l~~a 83 (100)
.++++||++++...+...+++++
T Consensus 41 selVdWLi~~~~~~~R~EAv~lg 63 (109)
T 1uhw_A 41 SGVIDWLVSNKLVRNRQEGLMIS 63 (109)
T ss_dssp HHHHHHHHHHTSSSSHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCHHHHHHHH
Confidence 47788888876333445555554
No 117
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=25.35 E-value=40 Score=17.77 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=8.2
Q ss_pred HHHHHHHhCCHHHHHHH
Q psy14144 17 PVYLAAQEGHLEVLKFL 33 (100)
Q Consensus 17 ~l~~a~~~g~~~~~~~l 33 (100)
++-.|+..+..++++-|
T Consensus 38 AietAa~S~d~elaEeL 54 (125)
T 3qil_A 38 AMQYASESKDTELAEEL 54 (125)
T ss_dssp HHHTTTSSCCSHHHHHH
T ss_pred HHHHHHHcCCHHHHHHH
Confidence 34444445555555444
Done!