Query psy1415
Match_columns 622
No_of_seqs 482 out of 2449
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 20:46:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 3.6E-42 1.2E-46 353.8 35.1 268 298-622 3-271 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 7E-43 2.4E-47 361.4 18.4 269 298-622 4-274 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.8E-33 6E-38 289.0 20.7 241 139-428 3-246 (284)
4 1dqv_A Synaptotagmin III; beta 100.0 2.6E-33 9E-38 289.6 14.9 242 139-429 4-249 (296)
5 3n5a_A Synaptotagmin-7; calciu 99.9 6.4E-26 2.2E-30 206.8 15.9 136 486-622 2-137 (138)
6 1w15_A Synaptotagmin IV; metal 99.9 9.6E-26 3.3E-30 209.7 17.0 139 483-622 13-151 (153)
7 1tjx_A Similar to synaptotagmi 99.9 2.4E-24 8.3E-29 201.6 16.3 139 483-622 8-146 (159)
8 2cm5_A Rabphilin-3A; protein t 99.9 2.1E-24 7E-29 203.6 14.8 139 483-622 20-158 (166)
9 2z0u_A WW domain-containing pr 99.8 5.7E-22 2E-26 184.5 6.6 125 484-608 27-154 (155)
10 2bwq_A Regulating synaptic mem 99.8 8.5E-21 2.9E-25 170.8 9.7 123 485-607 3-128 (129)
11 2dmg_A KIAA1228 protein; beta- 99.8 1.3E-20 4.3E-25 172.7 10.4 130 483-613 7-139 (142)
12 3fdw_A Synaptotagmin-like prot 99.8 6E-21 2E-25 176.2 7.6 131 483-613 6-138 (148)
13 1rsy_A Synaptotagmin I; calciu 99.8 1.5E-20 5.2E-25 174.3 10.3 127 482-610 24-151 (152)
14 1v27_A Regulating synaptic mem 99.8 5.9E-21 2E-25 174.5 6.8 132 483-614 4-138 (141)
15 1wfm_A Synaptotagmin XIII; C2 99.8 9.9E-20 3.4E-24 166.0 14.4 125 484-612 10-135 (138)
16 2z0u_A WW domain-containing pr 99.8 6.6E-20 2.3E-24 170.5 12.7 112 297-429 26-141 (155)
17 3fbk_A RGS3, RGP3, regulator o 99.8 6.5E-20 2.2E-24 170.3 12.2 129 482-612 9-140 (153)
18 1ugk_A Synaptotagmin IV, KIAA1 99.8 5.2E-19 1.8E-23 161.1 17.9 115 297-431 5-121 (138)
19 2d8k_A Synaptotagmin VII; exoc 99.8 4.9E-19 1.7E-23 161.9 16.9 113 297-429 9-122 (141)
20 3f04_A Synaptotagmin-1; C2A, c 99.8 3.7E-20 1.3E-24 169.8 9.2 125 483-609 17-142 (143)
21 2d8k_A Synaptotagmin VII; exoc 99.8 7.3E-20 2.5E-24 167.4 11.0 127 484-612 10-138 (141)
22 1v27_A Regulating synaptic mem 99.8 4.2E-19 1.4E-23 162.1 15.5 123 298-443 5-132 (141)
23 2bwq_A Regulating synaptic mem 99.8 7.4E-19 2.5E-23 158.0 16.2 112 299-430 3-119 (129)
24 3rdl_A Protein kinase C alpha 99.8 4.9E-20 1.7E-24 167.5 8.5 125 484-611 2-126 (137)
25 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.3E-19 8E-24 163.4 12.4 128 483-612 5-136 (138)
26 2chd_A Rabphilin-3A, exophilin 99.8 6.7E-20 2.3E-24 167.9 8.4 126 483-608 12-138 (142)
27 2b3r_A Phosphatidylinositol-4- 99.8 1.3E-19 4.3E-24 164.5 8.8 121 490-611 10-132 (134)
28 2chd_A Rabphilin-3A, exophilin 99.8 1.2E-18 4.1E-23 159.4 15.3 115 295-429 10-127 (142)
29 3f04_A Synaptotagmin-1; C2A, c 99.8 1.3E-18 4.6E-23 159.3 15.5 111 298-429 18-129 (143)
30 1rsy_A Synaptotagmin I; calciu 99.8 2.1E-18 7.1E-23 159.9 16.6 113 296-429 24-137 (152)
31 1tjx_A Similar to synaptotagmi 99.8 2.2E-18 7.4E-23 161.0 16.7 111 297-428 8-121 (159)
32 1a25_A CALB, protein kinase C 99.8 2.1E-19 7E-24 166.1 9.4 125 483-610 16-140 (149)
33 3fdw_A Synaptotagmin-like prot 99.8 1.1E-18 3.7E-23 161.1 14.1 113 297-429 6-121 (148)
34 2efr_A General control protein 99.8 1.6E-21 5.5E-26 176.4 -5.1 92 41-137 16-114 (155)
35 3n5a_A Synaptotagmin-7; calciu 99.8 2.2E-18 7.7E-23 156.6 15.7 109 300-429 2-113 (138)
36 2q3x_A Regulating synaptic mem 99.8 6.9E-19 2.3E-23 166.5 12.4 122 484-610 16-140 (171)
37 1wfm_A Synaptotagmin XIII; C2 99.8 4E-18 1.4E-22 155.4 17.0 109 297-429 9-119 (138)
38 1w15_A Synaptotagmin IV; metal 99.8 3.1E-18 1.1E-22 158.8 15.5 110 297-427 13-125 (153)
39 2enp_A B/K protein; C2 type 1, 99.8 3.3E-18 1.1E-22 157.5 15.4 114 296-429 8-128 (147)
40 2dmg_A KIAA1228 protein; beta- 99.8 3.3E-18 1.1E-22 156.6 14.6 111 297-429 7-122 (142)
41 1rh8_A Piccolo protein; beta-s 99.8 1.1E-19 3.7E-24 166.4 4.6 125 484-610 4-139 (142)
42 2cm5_A Rabphilin-3A; protein t 99.8 8.4E-18 2.9E-22 158.2 17.5 112 297-429 20-134 (166)
43 2enp_A B/K protein; C2 type 1, 99.8 7.2E-19 2.5E-23 162.0 8.7 126 483-610 9-142 (147)
44 1rh8_A Piccolo protein; beta-s 99.8 3.1E-18 1.1E-22 156.6 11.8 110 298-429 4-125 (142)
45 3fbk_A RGS3, RGP3, regulator o 99.7 1.2E-17 4.1E-22 154.9 14.3 110 297-429 10-123 (153)
46 3rdl_A Protein kinase C alpha 99.7 3E-17 1E-21 148.9 15.4 108 298-429 2-112 (137)
47 2b3r_A Phosphatidylinositol-4- 99.7 3E-17 1E-21 148.7 14.5 106 303-429 9-117 (134)
48 1a25_A CALB, protein kinase C 99.7 1.2E-16 4E-21 147.5 14.9 110 296-429 15-127 (149)
49 2q3x_A Regulating synaptic mem 99.7 1.2E-16 4.2E-21 151.0 14.7 107 298-429 16-126 (171)
50 2ep6_A MCTP2 protein; beta san 99.7 2.6E-17 9E-22 148.8 8.5 111 492-611 5-115 (133)
51 2dmh_A Myoferlin; beta-sandwic 99.7 9.4E-17 3.2E-21 146.4 11.8 113 498-616 5-122 (140)
52 3b7y_A E3 ubiquitin-protein li 99.7 5.1E-16 1.7E-20 143.7 14.9 95 311-429 17-115 (153)
53 2dmh_A Myoferlin; beta-sandwic 99.7 1.1E-15 3.8E-20 139.2 16.7 94 312-429 5-99 (140)
54 2ep6_A MCTP2 protein; beta san 99.7 1.3E-16 4.4E-21 144.2 10.2 97 307-429 6-102 (133)
55 2fk9_A Protein kinase C, ETA t 99.7 2.1E-16 7.1E-21 146.6 11.7 106 496-609 25-145 (157)
56 3b7y_A E3 ubiquitin-protein li 99.7 3.8E-16 1.3E-20 144.6 13.1 112 496-610 16-135 (153)
57 3m7f_B E3 ubiquitin-protein li 99.7 7.5E-16 2.6E-20 146.2 15.3 95 311-429 5-103 (176)
58 3kwu_A MUNC13-1; calcium bindi 99.7 1.1E-15 3.6E-20 140.8 15.8 92 312-429 15-117 (148)
59 1gmi_A Protein kinase C, epsil 99.7 2E-16 6.9E-21 143.6 10.3 103 499-609 5-121 (136)
60 3m7f_B E3 ubiquitin-protein li 99.7 5.5E-16 1.9E-20 147.1 13.6 112 496-610 4-123 (176)
61 3kwu_A MUNC13-1; calcium bindi 99.7 5.7E-16 2E-20 142.6 12.4 103 499-610 16-129 (148)
62 1rlw_A Phospholipase A2, CALB 99.6 1.2E-16 3.9E-21 143.0 6.8 108 499-611 2-113 (126)
63 1wfj_A Putative elicitor-respo 99.6 2.7E-16 9.1E-21 142.6 7.3 104 497-608 7-113 (136)
64 2fk9_A Protein kinase C, ETA t 99.6 9.7E-16 3.3E-20 142.1 10.8 94 311-430 26-129 (157)
65 1gmi_A Protein kinase C, epsil 99.6 2E-15 6.8E-20 137.0 10.9 91 313-430 5-107 (136)
66 3pyc_A E3 ubiquitin-protein li 99.6 5.3E-15 1.8E-19 133.3 13.0 91 314-429 5-98 (132)
67 1wfj_A Putative elicitor-respo 99.6 3E-15 1E-19 135.6 11.0 92 312-429 8-100 (136)
68 3pyc_A E3 ubiquitin-protein li 99.6 1.2E-15 4.2E-20 137.5 8.3 105 499-610 4-113 (132)
69 1rlw_A Phospholipase A2, CALB 99.6 8.2E-15 2.8E-19 130.8 12.5 105 313-443 2-110 (126)
70 2nq3_A Itchy homolog E3 ubiqui 99.6 9.2E-15 3.2E-19 138.2 12.0 91 312-429 34-124 (173)
71 2nq3_A Itchy homolog E3 ubiqui 99.5 2.5E-14 8.6E-19 135.2 11.8 104 498-610 34-143 (173)
72 2cjt_A UNC-13 homolog A, MUNC1 99.5 6.7E-14 2.3E-18 126.1 8.3 86 499-598 4-90 (131)
73 3l9b_A Otoferlin; C2-domain, b 99.4 2.4E-13 8.1E-18 121.5 9.2 88 314-429 21-109 (144)
74 3jzy_A Intersectin 2; C2 domai 99.4 3.8E-13 1.3E-17 148.9 10.4 113 497-616 384-501 (510)
75 3pfq_A PKC-B, PKC-beta, protei 99.4 2.9E-13 9.7E-18 154.9 8.9 126 483-611 157-282 (674)
76 2cjs_A UNC-13 homolog A, MUNC1 99.4 5.1E-13 1.7E-17 125.3 8.5 86 499-598 13-99 (167)
77 3nsj_A Perforin-1; pore formin 99.4 1.3E-12 4.5E-17 143.9 12.0 99 499-607 393-491 (540)
78 1djx_A PLC-D1, phosphoinositid 99.4 1E-12 3.4E-17 147.9 10.9 115 498-616 495-612 (624)
79 2cjt_A UNC-13 homolog A, MUNC1 99.4 1.9E-12 6.4E-17 116.6 10.3 86 313-430 4-90 (131)
80 1cjy_A CPLA2, protein (cytosol 99.3 5.9E-13 2E-17 151.0 7.5 109 497-610 15-127 (749)
81 3l9b_A Otoferlin; C2-domain, b 99.3 3.6E-12 1.2E-16 113.9 9.0 105 501-615 22-128 (144)
82 3nsj_A Perforin-1; pore formin 99.3 3.7E-12 1.3E-16 140.3 11.0 89 313-426 393-481 (540)
83 3jzy_A Intersectin 2; C2 domai 99.3 8.1E-12 2.8E-16 138.2 12.5 94 311-429 384-477 (510)
84 2cjs_A UNC-13 homolog A, MUNC1 99.3 9.7E-12 3.3E-16 116.6 11.0 87 313-431 13-100 (167)
85 3pfq_A PKC-B, PKC-beta, protei 99.2 4.2E-11 1.5E-15 136.9 15.0 127 291-444 151-280 (674)
86 1djx_A PLC-D1, phosphoinositid 99.2 4E-11 1.4E-15 134.9 14.1 96 312-429 495-595 (624)
87 2b9c_A Striated-muscle alpha t 99.2 1.4E-14 4.7E-19 131.2 -12.5 70 41-111 71-147 (147)
88 1cjy_A CPLA2, protein (cytosol 99.2 3E-11 1E-15 137.1 8.3 106 312-443 16-125 (749)
89 3bxj_A RAS GTPase-activating p 99.0 1.4E-11 4.8E-16 135.0 -1.1 99 499-609 10-116 (483)
90 3qr0_A Phospholipase C-beta (P 98.8 5E-09 1.7E-13 120.2 9.9 104 500-615 650-758 (816)
91 2zkm_X 1-phosphatidylinositol- 98.8 5.5E-09 1.9E-13 120.4 9.1 106 499-616 677-787 (799)
92 3bxj_A RAS GTPase-activating p 98.8 8.4E-10 2.9E-14 120.9 1.5 90 169-272 9-105 (483)
93 3ohm_B 1-phosphatidylinositol- 98.8 8.5E-09 2.9E-13 118.9 9.5 104 500-615 725-832 (885)
94 3ohm_B 1-phosphatidylinositol- 98.7 1.2E-07 4.3E-12 109.3 14.3 85 315-429 726-816 (885)
95 3qr0_A Phospholipase C-beta (P 98.7 1.3E-07 4.4E-12 108.6 14.3 86 314-429 650-742 (816)
96 2zkm_X 1-phosphatidylinositol- 98.7 7.4E-08 2.5E-12 111.0 12.3 86 313-429 677-770 (799)
97 1yrk_A NPKC-delta, protein kin 98.0 4.3E-05 1.5E-09 66.2 10.5 103 499-610 5-114 (126)
98 2enj_A NPKC-theta, protein kin 97.8 9.3E-05 3.2E-09 65.0 10.4 103 499-610 9-119 (138)
99 1yrk_A NPKC-delta, protein kin 97.8 0.00015 5E-09 62.9 11.2 83 314-429 6-95 (126)
100 2z5i_A TM, general control pro 97.8 7.3E-06 2.5E-10 60.0 2.2 24 114-137 5-28 (52)
101 2enj_A NPKC-theta, protein kin 97.8 0.00017 5.9E-09 63.3 11.0 66 334-429 30-100 (138)
102 2b9c_A Striated-muscle alpha t 97.7 3.6E-06 1.2E-10 76.0 -0.2 85 49-134 2-114 (147)
103 3mud_A DNA repair protein XRCC 95.5 5.9E-05 2E-09 68.9 -10.5 45 93-137 95-151 (175)
104 2wxf_A Phosphatidylinositol-4, 93.0 0.39 1.3E-05 55.9 11.2 96 499-597 216-325 (940)
105 1e7u_A Phosphatidylinositol 3- 92.6 0.49 1.7E-05 55.2 11.3 98 499-597 217-331 (961)
106 3hhm_A Phosphatidylinositol-4, 92.4 0.38 1.3E-05 56.5 9.9 98 499-597 354-456 (1091)
107 3u1c_A Tropomyosin alpha-1 cha 90.0 0.014 4.7E-07 49.1 -3.9 87 49-136 8-101 (101)
108 3l4c_A Dedicator of cytokinesi 89.4 4.7 0.00016 38.4 12.7 60 536-595 76-139 (220)
109 3l4c_A Dedicator of cytokinesi 88.1 4.3 0.00015 38.6 11.5 61 350-426 78-138 (220)
110 2y3a_A Phosphatidylinositol-4, 87.5 0.55 1.9E-05 55.4 5.9 96 499-597 352-471 (1092)
111 3u59_A Tropomyosin beta chain; 85.3 1.5 5.2E-05 36.5 6.0 87 49-136 8-101 (101)
112 3zwh_Q Myosin-9; Ca-binding pr 84.4 0.16 5.5E-06 35.5 -0.4 28 105-132 4-31 (45)
113 2wxf_A Phosphatidylinositol-4, 83.4 4.5 0.00015 47.1 10.8 107 311-429 214-325 (940)
114 3hhm_A Phosphatidylinositol-4, 82.3 11 0.00038 44.4 13.5 95 312-429 353-456 (1091)
115 2k1k_A Ephrin type-A receptor 81.8 0.076 2.6E-06 35.9 -2.8 31 14-44 8-38 (38)
116 1e7u_A Phosphatidylinositol 3- 80.5 11 0.00038 43.9 12.6 112 312-429 216-331 (961)
117 1ic2_A Tropomyosin alpha chain 75.6 4.3 0.00015 32.2 5.2 37 99-135 19-55 (81)
118 1ic2_A Tropomyosin alpha chain 71.7 0.56 1.9E-05 37.5 -0.9 71 49-128 5-76 (81)
119 2ks1_B Epidermal growth factor 71.7 0.38 1.3E-05 33.5 -1.7 32 14-45 8-39 (44)
120 3u1c_A Tropomyosin alpha-1 cha 71.3 5.8 0.0002 32.9 5.2 43 95-137 18-60 (101)
121 1wt6_A Myotonin-protein kinase 69.1 11 0.00038 29.5 5.9 44 99-142 37-81 (81)
122 2efr_A General control protein 69.0 7.3 0.00025 34.9 5.7 42 92-134 14-55 (155)
123 2l2t_A Receptor tyrosine-prote 67.5 0.31 1.1E-05 33.9 -2.8 30 16-45 9-38 (44)
124 1a92_A Delta antigen; leucine 61.2 6.5 0.00022 27.5 2.9 32 108-139 8-39 (50)
125 3u59_A Tropomyosin beta chain; 60.6 12 0.00043 30.8 5.2 41 96-136 19-59 (101)
126 2klu_A T-cell surface glycopro 60.3 1.7 5.8E-05 32.7 -0.2 21 25-45 18-39 (70)
127 2y3a_A Phosphatidylinositol-4, 59.0 7.5 0.00026 45.9 4.8 74 311-389 350-428 (1092)
128 2k9y_A Ephrin type-A receptor 58.1 1 3.4E-05 30.8 -1.7 27 17-43 13-40 (41)
129 2eqb_B RAB guanine nucleotide 57.6 20 0.00068 29.3 5.7 42 93-134 19-60 (97)
130 2yrb_A Protein fantom; beta sa 56.3 17 0.00057 32.6 5.6 97 495-595 13-115 (156)
131 3cvf_A Homer-3, homer protein 55.9 28 0.00097 27.3 6.1 50 84-133 4-53 (79)
132 1kd8_A GABH AIV, GCN4 acid bas 53.6 14 0.00048 24.0 3.3 32 101-132 2-33 (36)
133 2akf_A Coronin-1A; coiled coil 42.8 17 0.00059 22.4 2.3 15 122-136 14-28 (32)
134 2qzq_A Axin interactor, dorsal 40.0 62 0.0021 28.7 6.5 98 496-596 10-113 (152)
135 2yrb_A Protein fantom; beta sa 36.2 2.3E+02 0.0078 25.2 9.7 75 336-432 40-120 (156)
136 3cve_A Homer protein homolog 1 35.5 84 0.0029 24.1 5.8 43 90-132 4-46 (72)
137 3u0c_A Invasin IPAB, 62 kDa an 34.7 53 0.0018 29.3 5.1 33 107-139 117-149 (201)
138 2jwa_A Receptor tyrosine-prote 34.4 2 6.8E-05 29.8 -3.1 29 17-45 12-40 (44)
139 3hnw_A Uncharacterized protein 34.0 56 0.0019 28.5 5.3 44 93-136 82-125 (138)
140 3efg_A Protein SLYX homolog; x 32.0 72 0.0025 24.9 5.1 45 92-136 6-50 (78)
141 1kd8_B GABH BLL, GCN4 acid bas 31.6 70 0.0024 20.8 3.9 29 101-129 2-30 (36)
142 3mtu_A Tropomyosin alpha-1 cha 31.5 99 0.0034 23.9 5.8 43 96-138 5-54 (75)
143 3nmd_A CGMP dependent protein 31.0 94 0.0032 23.8 5.3 36 99-134 32-67 (72)
144 3azd_A Short alpha-tropomyosin 30.9 19 0.00065 23.9 1.3 27 96-122 7-33 (37)
145 2ocy_A RAB guanine nucleotide 28.5 78 0.0027 28.1 5.3 39 96-134 54-92 (154)
146 1zza_A Stannin, AG8_1; helix, 28.4 6.3 0.00021 30.1 -1.6 12 34-45 30-41 (90)
147 2yko_A LINE-1 ORF1P; RNA-bindi 28.3 78 0.0027 30.1 5.5 46 92-137 5-50 (233)
148 3c3f_A Alpha/beta peptide with 28.0 91 0.0031 20.0 3.9 28 101-128 2-29 (34)
149 2qzq_A Axin interactor, dorsal 26.3 1.2E+02 0.0042 26.8 6.1 93 314-429 14-114 (152)
150 2bni_A General control protein 24.9 1E+02 0.0035 19.8 3.8 28 101-128 2-29 (34)
151 2wq1_A General control protein 24.9 1.4E+02 0.0048 19.0 4.7 28 102-129 2-29 (33)
152 3vkg_A Dynein heavy chain, cyt 24.1 3.4 0.00011 54.3 -6.2 43 107-149 2063-2112(3245)
153 2r2v_A GCN4 leucine zipper; co 23.5 1.5E+02 0.0052 19.0 4.7 28 102-129 3-30 (34)
154 2fxo_A Myosin heavy chain, car 22.1 1.5E+02 0.005 25.3 5.8 40 94-133 77-116 (129)
155 3cve_A Homer protein homolog 1 21.1 1.2E+02 0.0043 23.2 4.4 25 106-130 6-30 (72)
156 1ci6_A Transcription factor AT 20.8 2.3E+02 0.0077 20.9 5.8 39 96-134 19-57 (63)
157 3mq7_A Bone marrow stromal ant 20.8 2E+02 0.0067 24.1 5.8 36 93-128 71-106 (121)
158 2l34_A TYRO protein tyrosine k 20.7 6.4 0.00022 25.5 -2.5 22 14-35 4-25 (33)
159 1jnm_A Proto-oncogene C-JUN; B 20.5 2.4E+02 0.0081 20.6 5.9 40 95-134 17-56 (62)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3.6e-42 Score=353.84 Aligned_cols=268 Identities=46% Similarity=0.788 Sum_probs=232.6
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC-ceeEeeeecCCCCCeeeceeEEcccCcc
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEFTFTGITPH 376 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f~f~~~~~~ 376 (622)
...|+|.+++.|.+..+.|.|.|++|++|+.+| .++.+||||++++.+++ +.++|+++++++||+|||+|.|. +...
T Consensus 3 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~-v~~~ 80 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALD-MGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYS 80 (284)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCS-SSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEEC-CCGG
T ss_pred cceeEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEE-echH
Confidence 357999999999999999999999999999998 78999999999997654 38999999999999999999997 6666
Q ss_pred cCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccCCceeeEEEEeeccCCCCccceeEEE
Q psy1415 377 QLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETYGSTLHFVVFSFDRYSRDDIVGEVFY 456 (622)
Q Consensus 377 ~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~l~~~~~~~~~g~~~~ 456 (622)
++....|.|.|| |++.++++++||++.++|.++.... ....|+
T Consensus 81 ~~~~~~l~~~V~-------------------d~d~~~~~~~lG~~~i~l~~l~~~~------------------~~~~w~ 123 (284)
T 2r83_A 81 ELAGKTLVMAVY-------------------DFDRFSKHDIIGEFKVPMNTVDFGH------------------VTEEWR 123 (284)
T ss_dssp GCTTCEEEEEEE-------------------ECCSSSCCCEEEEEEEEGGGCCCSS------------------CEEEEE
T ss_pred HhCcCEEEEEEE-------------------ECCCCCCCceeEEEEEcchhcccCC------------------cceeEE
Confidence 666666777776 8898889999999999999987221 123455
Q ss_pred eeecccccCcccccccccCccccccccCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEe
Q psy1415 457 SLQSFETYGHSLSFCRDIQPRNLRIKSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRV 536 (622)
Q Consensus 457 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~ 536 (622)
.+..... ......|++.+++.|.|..+.|.|.|++|++|+.+|.+|.+||||++++.+++...
T Consensus 124 ~L~~~~~-----------------~~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~ 186 (284)
T 2r83_A 124 DLQSAEK-----------------EEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRL 186 (284)
T ss_dssp ECBCCSS-----------------CCCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEE
T ss_pred Eeecccc-----------------ccccccccEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEe
Confidence 5443211 01235689999999999999999999999999999999999999999998877776
Q ss_pred eEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCcee
Q psy1415 537 AKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIA 616 (622)
Q Consensus 537 ~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~ 616 (622)
.+++|.++++++||.|||.|.|.++.++++...|.|+|||++.++++++||++.|++. ..+.+..||++++..|++.++
T Consensus 187 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~-~~~~~~~~w~~~~~~~~~~~~ 265 (284)
T 2r83_A 187 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYN-STGAELRHWSDMLANPRRPIA 265 (284)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETT-CCHHHHHHHHHHHHSTTSCEE
T ss_pred eeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCC-CCCcHHHHHHHHHHCCCCchh
Confidence 7899999999999999999999998877777789999999999999999999999995 457889999999999999999
Q ss_pred eEEecC
Q psy1415 617 EWLTYR 622 (622)
Q Consensus 617 ~w~~l~ 622 (622)
+||+|.
T Consensus 266 ~W~~L~ 271 (284)
T 2r83_A 266 QWHTLQ 271 (284)
T ss_dssp EEEECB
T ss_pred eeeecC
Confidence 999984
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=7e-43 Score=361.45 Aligned_cols=269 Identities=38% Similarity=0.706 Sum_probs=226.1
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccCcc
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGITPH 376 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~~~ 376 (622)
...|+|.+++.|.+..+.|.|.|++|++|+.+| .++.+||||++++.+++. +++|+++++++||+|||+|.|. +...
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~ 81 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKD-SNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFS-VPLA 81 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCS-TTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEE-CCGG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcC-CCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEE-ecHH
Confidence 457999999999999999999999999999999 789999999999976554 8999999999999999999997 6667
Q ss_pred cCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEe-CCccccCCceeeEEEEeeccCCCCccceeEE
Q psy1415 377 QLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYS-LQSFETYGSTLHFVVFSFDRYSRDDIVGEVF 455 (622)
Q Consensus 377 ~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~-l~~l~~~~~~~~~~~~~l~~~~~~~~~g~~~ 455 (622)
+++...|.|.|| |++.++++++||++.++ +..+... ......|
T Consensus 82 ~l~~~~L~~~V~-------------------d~d~~~~~~~iG~~~i~~l~~~~~~-----------------~~~~~~w 125 (296)
T 1dqv_A 82 ELAQRKLHFSVY-------------------DFDRFSRHDLIGQVVLDNLLELAEQ-----------------PPDRPLW 125 (296)
T ss_dssp GGSSCCCEEEEE-------------------ECCSSSCCCEEEEEECCCTTGGGSS-----------------CSSCCCC
T ss_pred HhcCCEEEEEEE-------------------EcCCCCCCceEEEEEeccccccccC-----------------Cccceee
Confidence 666656666666 99999999999999985 4444310 0112234
Q ss_pred EeeecccccCcccccccccCccccccccCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeE
Q psy1415 456 YSLQSFETYGHSLSFCRDIQPRNLRIKSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQR 535 (622)
Q Consensus 456 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~ 535 (622)
+.+.... ......|++.++++|.|..+.|+|.|++|++|+++|..|.+||||++++.+++..
T Consensus 126 ~~L~~~~------------------~~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~ 187 (296)
T 1dqv_A 126 RDILEGG------------------SEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRR 187 (296)
T ss_dssp EECBCCS------------------SCCSCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCT
T ss_pred ecccccc------------------ccccccceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcC
Confidence 4443211 0223579999999999999999999999999999999999999999999655554
Q ss_pred eeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCce
Q psy1415 536 VAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQI 615 (622)
Q Consensus 536 ~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i 615 (622)
..+++|+++++++||.|||.|.|.+..+++.+..|.|+|||++.++++++||.+.|++......+..||++|+.+|++++
T Consensus 188 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~ 267 (296)
T 1dqv_A 188 LKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 267 (296)
T ss_dssp TSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred ccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCce
Confidence 55789999999999999999999998766666679999999999999999999999997654458999999999999999
Q ss_pred eeEEecC
Q psy1415 616 AEWLTYR 622 (622)
Q Consensus 616 ~~w~~l~ 622 (622)
++||+|+
T Consensus 268 ~~w~~L~ 274 (296)
T 1dqv_A 268 EHWHQLV 274 (296)
T ss_dssp CSCCCCB
T ss_pred eEeeecc
Confidence 9999984
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.8e-33 Score=289.01 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=194.5
Q ss_pred ceeehhhhhhheeeeeeEEEEEeecCCCccccccccceeccccCCcccCCCCCCCCCccceeeecCCCCCCCccccccCC
Q psy1415 139 TVLGLGLAGLVFAATVCLATCYCRRRTSPLEAKKLALSQMTLKRPTAVRSPAAAGPNSHYLKKSPSPTYATPVASLVNSP 218 (622)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~dp~~~~vk~~~~p~~~~~~kT~v~~~ 218 (622)
..+|.+-+++.|.. ....|.++|+.++++++.+..+.+|| ||++.+.+.+++..+|+++++
T Consensus 3 ~~~G~l~~~l~y~~----------------~~~~L~v~v~~a~~L~~~d~~~~~dp---yv~v~~~~~~~~~~~T~~~~~ 63 (284)
T 2r83_A 3 EKLGKLQYSLDYDF----------------QNNQLLVGIIQAAELPALDMGGTSDP---YVKVFLLPDKKKKFETKVHRK 63 (284)
T ss_dssp CCCCEEEEEEEEET----------------TTTEEEEEEEEEECCCCCSSSSSCCE---EEEEEEETCTTSCEECCCCCS
T ss_pred cceeEEEEEEEEEC----------------CCCEEEEEEEEeeCCCCCCCCCCCCe---EEEEEEEcCCCceEeCCcccC
Confidence 35788888888876 44455555555555666666667899 999999887778889999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCeEEEEeccccCCCcceeeeccCCCCCCCCCCCCCCCccccccccccccCCCCCCC
Q psy1415 219 TGSTNSNNGAGSNSHSPIQPCVALPGTVVITENEKAAPLVLGVAGPTTAGNGPAANGTDSDDSCALVNKETVDCDGNAEG 298 (622)
Q Consensus 219 t~nP~~~E~~~f~~~~~~~~~~~~L~~~V~d~d~~~~dd~lG~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (622)
|+||.|||+|.|.. ...+...+.|+|.|||.|.+++|++||++.+++.++.... ..-.|..+.... .....
T Consensus 64 ~~nP~wne~f~f~v-~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~------~~~~w~~L~~~~--~~~~~ 134 (284)
T 2r83_A 64 TLNPVFNEQFTFKV-PYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH------VTEEWRDLQSAE--KEEQE 134 (284)
T ss_dssp CSSCEEEEEEEECC-CGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS------CEEEEEECBCCS--SCCCC
T ss_pred CCCCeeCceEEEEe-chHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCC------cceeEEEeeccc--ccccc
Confidence 99999999999973 3334456899999999999999999999999999986543 112355444211 12234
Q ss_pred cceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEcccCc
Q psy1415 299 KLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGITP 375 (622)
Q Consensus 299 ~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~~~ 375 (622)
..|+|.+.+.|.+..+.|.|.|++|++|+.+| .++.+||||++++.+++. +++|+++++++||+|||+|.|. +..
T Consensus 135 ~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d-~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~ 212 (284)
T 2r83_A 135 KLGDICFSLRYVPTAGKLTVVILEAKNLKKMD-VGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE-VPF 212 (284)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-TTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEE-CCT
T ss_pred ccccEEEEEEecCcCCceEEEEEEeECCCCcC-CCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEe-CCH
Confidence 57999999999999999999999999999998 789999999999976543 7899999999999999999997 666
Q ss_pred ccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCcc
Q psy1415 376 HQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSF 428 (622)
Q Consensus 376 ~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l 428 (622)
.+++...|.|.|| |++.++++++||++.++++.+
T Consensus 213 ~~l~~~~l~i~V~-------------------d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 213 EQIQKVQVVVTVL-------------------DYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp TTGGGEEEEEEEE-------------------ECCSSSCCCEEEEEEEETTCC
T ss_pred HHhCceEEEEEEE-------------------eCCCCCCCcEEEEEEECCCCC
Confidence 6666555666666 999999999999999999875
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=2.6e-33 Score=289.60 Aligned_cols=242 Identities=20% Similarity=0.235 Sum_probs=191.0
Q ss_pred ceeehhhhhhheeeeeeEEEEEeecCCCccccccccceeccccCCcccCCCCCCCCCccceeeecCCCCCCCccccccCC
Q psy1415 139 TVLGLGLAGLVFAATVCLATCYCRRRTSPLEAKKLALSQMTLKRPTAVRSPAAAGPNSHYLKKSPSPTYATPVASLVNSP 218 (622)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~dp~~~~vk~~~~p~~~~~~kT~v~~~ 218 (622)
..+|.+.+++.|.. ....|.++++.++++++.+..+.+|| ||++.++|.+++..||+++++
T Consensus 4 ~~~G~l~~~l~y~~----------------~~~~L~v~v~~a~~L~~~d~~g~~dP---yv~v~l~~~~~~~~kT~v~~~ 64 (296)
T 1dqv_A 4 APCGRISFALRYLY----------------GSDQLVVRILQALDLPAKDSNGFSDP---YVKIYLLPDRKKKFQTKVHRK 64 (296)
T ss_dssp CSSCEEEEEEECCS----------------SSCEEEEEEEEEECCCCCSTTSCCCE---EEEEECTTSTTSCEECCCCCS
T ss_pred CeeeEEEEEEEEeC----------------CCCEEEEEEEEeECCCCcCCCCCcCe---EEEEEEEcCCCeeEeCCccCC
Confidence 45788999999877 44455555666666666666667899 999999998888999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCeEEEEeccccCCCcceeeeccC-CCCCCCCCCCCCCCccccccccccccCCCCCC
Q psy1415 219 TGSTNSNNGAGSNSHSPIQPCVALPGTVVITENEKAAPLVLGVAGPT-TAGNGPAANGTDSDDSCALVNKETVDCDGNAE 297 (622)
Q Consensus 219 t~nP~~~E~~~f~~~~~~~~~~~~L~~~V~d~d~~~~dd~lG~~~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (622)
|+||.|||+|.|.. .+.+.....|+|.|||.|.+++|++||++.++ +.++...... ...|..+... ....
T Consensus 65 t~nP~wne~f~f~v-~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~-----~~~w~~L~~~---~~~~ 135 (296)
T 1dqv_A 65 TLNPIFNETFQFSV-PLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPD-----RPLWRDILEG---GSEK 135 (296)
T ss_dssp CSSCEEEEEEEEEC-CGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSS-----CCCCEECBCC---SSCC
T ss_pred CCCCcEeeEEEEEe-cHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCcc-----ceeeeccccc---cccc
Confidence 99999999999973 44445567999999999999999999999984 4443321110 1124443321 1233
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcccC
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
...|+|.+.+.|.+..+.|.|.|++|++|+.+| .+|.+||||++++.+++ .++||+++++++||+|||.|.|. +.
T Consensus 136 ~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d-~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 213 (296)
T 1dqv_A 136 ADLGELNFSLCYLPTAGLLTVTIIKASNLKAMD-LTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFD-VA 213 (296)
T ss_dssp SCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-SSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCC-CC
T ss_pred cccceEEEEEEeccccceeEEEEEEeecCCccC-CCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEE-cC
Confidence 457999999999999999999999999999999 78999999999997544 28899999999999999999997 66
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
..++....|.|.|| |++.++++++||++.++++.+.
T Consensus 214 ~~~l~~~~L~i~V~-------------------d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 214 PESVENVGLSIAVV-------------------DYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp SGGGGSCCCCCEEE-------------------ECCSSSCCEEEEECCCSSCTTC
T ss_pred HHHccCcEEEEEEE-------------------eCCCCCCCceEEEEEECCccCC
Confidence 66554444555555 9999999999999999998774
No 5
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.94 E-value=6.4e-26 Score=206.78 Aligned_cols=136 Identities=46% Similarity=0.896 Sum_probs=126.8
Q ss_pred CCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCC
Q psy1415 486 RGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNL 565 (622)
Q Consensus 486 ~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l 565 (622)
+|+|.++++|.+..+.|+|.|++|++|+.++..|.+||||++++.+.+....+++|+++++++||.|||.|.|.+...++
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 69999999999999999999999999999999999999999999887776678999999999999999999999987776
Q ss_pred CccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCceeeEEecC
Q psy1415 566 DSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIAEWLTYR 622 (622)
Q Consensus 566 ~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~~w~~l~ 622 (622)
.+..|.|+|||++.++++++||++.|+|. ..+.+..||++|+..|++.+++||+|+
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~-~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWK-SGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSS-SCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEccc-cCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 66789999999999999999999999996 467889999999999999999999986
No 6
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.93 E-value=9.6e-26 Score=209.71 Aligned_cols=139 Identities=55% Similarity=0.952 Sum_probs=122.1
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.+++.|.+..+.|.|.|++|++|+.++..|.+||||++++.+++....+++|+++++++||.|||.|.|.+..
T Consensus 13 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp ---CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred CccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 34679999999999999999999999999999999999999999999887776678899999999999999999999987
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCceeeEEecC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIAEWLTYR 622 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~~w~~l~ 622 (622)
.++.+..|.|+|||++.++++++||++.|++.. .+.+..+||+|+..|++.+++||+|+
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~-~~~~~~~W~~l~~~p~~~~~~Wh~L~ 151 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATA-EGSGGGHWKEICDFPRRQIAKWHMLC 151 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC-CSHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC-CchHHHHHHHHHhCCCCeeeeccccc
Confidence 777667899999999999999999999999976 78889999999999999999999986
No 7
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.92 E-value=2.4e-24 Score=201.55 Aligned_cols=139 Identities=47% Similarity=0.863 Sum_probs=127.9
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.+++.|.+..+.|+|.|++|+||+.++.+|.+||||++++.+++....+++|+++++++||.|||.|.|.+..
T Consensus 8 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 45689999999999999999999999999999999999999999999877766678899999999999999999999987
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCceeeEEecC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIAEWLTYR 622 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~~w~~l~ 622 (622)
.++....|.|+|||++.++++++||++.|++.. .+.+..||++|+..|++.+++||+|.
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~-~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNS-TGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTC-CHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCC-CCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 666666799999999999999999999999964 57889999999999999999999984
No 8
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.91 E-value=2.1e-24 Score=203.58 Aligned_cols=139 Identities=32% Similarity=0.610 Sum_probs=125.0
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.+++.|.+..+.|+|.|++|++|+.++.+|.+||||++++.+.+....+++|+++++++||.|||.|.|.+..
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcch
Confidence 45689999999999999999999999999999999999999999999765444558899999999999999999999987
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCceeeEEecC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIAEWLTYR 622 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~~w~~l~ 622 (622)
.++....|.|+|||++.++++++||++.|+|.. .+.+..+||+|+..|++.+++||.|+
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~-~~~~~~~W~~l~~~~~~~~~~Wh~L~ 158 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISA-KGERLKHWYECLKNKDKKIERWHQLQ 158 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTC-CHHHHHHHHHHHHCTTCCEEEEEECB
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEeccc-CCchhHHHHHHHhCCCCcceEeeECC
Confidence 666667899999999999999999999999964 56788999999999999999999984
No 9
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=5.7e-22 Score=184.52 Aligned_cols=125 Identities=18% Similarity=0.251 Sum_probs=109.1
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeC-CeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYK-GQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~-~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
...|+|.+++.|.+..+.|+|.|++|+||+++|.+|.+||||++++.+. +....++||+++++|+||+|||.|.|.|..
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 4579999999999999999999999999999999999999999999762 222337899999999999999999999876
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC--Ccccchhhhhh
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS--GTALTHWTDVC 608 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~--~~~~~~W~~L~ 608 (622)
.++....|.|+|||+++++++++||++.|+|.++. +....+||+|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 55556679999999999999999999999998763 56778888875
No 10
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=8.5e-21 Score=170.77 Aligned_cols=123 Identities=24% Similarity=0.477 Sum_probs=100.8
Q ss_pred CCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEe-cCC
Q psy1415 485 GRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEV-PAD 563 (622)
Q Consensus 485 ~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v-~~~ 563 (622)
..|+|.+++.|.+..+.|+|.|++|++|++++..|.+||||++++.+++....+++|+++++++||.|||.|.|.+ ...
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 4699999999999999999999999999999999999999999997654444588999999999999999999995 434
Q ss_pred CCCccEEEEEEEEcCCCCC--CceeEEEEECCCCCCCcccchhhhh
Q psy1415 564 NLDSVSLELLLLDWDRVTK--NEVIGRLDLGGDKSSGTALTHWTDV 607 (622)
Q Consensus 564 ~l~~~~L~i~V~D~d~~~~--d~~LG~v~i~L~~~~~~~~~~W~~L 607 (622)
++....|.|+|||++.+++ +++||++.|+|.++...+..+||+|
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L 128 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL 128 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence 4455679999999999987 9999999999986554445566654
No 11
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=172.68 Aligned_cols=130 Identities=28% Similarity=0.521 Sum_probs=111.8
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.+++.|.+..+.|.|.|++|++|++++..| +||||++++.+++....+++|+++++++||.|||.|.|.+..
T Consensus 7 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 3567999999999999999999999999999999999 999999999865544457899999999999999999999875
Q ss_pred CCCCccEEEEEEEEcCCCCC--CceeEEEEECCCCCC-CcccchhhhhhcCCCC
Q psy1415 563 DNLDSVSLELLLLDWDRVTK--NEVIGRLDLGGDKSS-GTALTHWTDVCNSPRR 613 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~--d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p~~ 613 (622)
.++....|.|+|||++.+++ +++||++.|+|..+. +....+||+|....+.
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 55555579999999998863 579999999997654 4578999999987543
No 12
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.82 E-value=6e-21 Score=176.25 Aligned_cols=131 Identities=26% Similarity=0.436 Sum_probs=112.9
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCC-CCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEec
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMD-VTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 561 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d-~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~ 561 (622)
...+|+|.++++|.+..+.|.|.|++|++|+.++ ..|.+||||++++.+++....+++|+++++++||.|||.|.|.+.
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 3567999999999999999999999999999988 589999999999976554445789999999999999999999998
Q ss_pred CCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcCCCC
Q psy1415 562 ADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNSPRR 613 (622)
Q Consensus 562 ~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p~~ 613 (622)
..++....|.|+|||++.++++++||++.|+|..+. +....+||+|.+....
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 877767789999999999999999999999997543 3466789999877654
No 13
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=1.5e-20 Score=174.32 Aligned_cols=127 Identities=33% Similarity=0.642 Sum_probs=109.1
Q ss_pred ccCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEec
Q psy1415 482 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 561 (622)
Q Consensus 482 ~~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~ 561 (622)
.....|+|.+++.|.+..+.|+|.|++|++|+.++..|.+||||++++.+++. .+++|+++++++||.|||.|.|.+.
T Consensus 24 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~v~ 101 (152)
T 1rsy_A 24 EEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKVP 101 (152)
T ss_dssp --CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC--SCEECCCCTTCSSCEEEEEEEECCC
T ss_pred CCCCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC--ceEeccccCCCCCCcCcccEEEeec
Confidence 34567999999999999999999999999999999999999999999975433 3678999999999999999999987
Q ss_pred CCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcC
Q psy1415 562 ADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNS 610 (622)
Q Consensus 562 ~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~ 610 (622)
..++....|.|+|||++.++++++||++.|+|..+. +....+||+|.+.
T Consensus 102 ~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 102 YSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp HHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred HHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 655555679999999999999999999999997653 4566788887654
No 14
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=5.9e-21 Score=174.49 Aligned_cols=132 Identities=23% Similarity=0.459 Sum_probs=113.8
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEE-ec
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-VP 561 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~-v~ 561 (622)
+...|+|.+++.|.+..+.|+|.|++|++|+.++..|.+||||++++.+++....+++|+++++++||.|||.|.|. +.
T Consensus 4 ~~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CCcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 45689999999999999999999999999999999999999999998654333457899999999999999999999 44
Q ss_pred CCCCCccEEEEEEEEcCCCCC--CceeEEEEECCCCCCCcccchhhhhhcCCCCc
Q psy1415 562 ADNLDSVSLELLLLDWDRVTK--NEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQ 614 (622)
Q Consensus 562 ~~~l~~~~L~i~V~D~d~~~~--d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~ 614 (622)
..++....|.|+|||++.+++ +++||++.|+|.++......+||+|.....+.
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGP 138 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCC
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCC
Confidence 445555679999999999987 99999999999876666688999998876554
No 15
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=9.9e-20 Score=166.05 Aligned_cols=125 Identities=23% Similarity=0.352 Sum_probs=109.6
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCC
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPAD 563 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~ 563 (622)
...|+|.+++.|.+..+.|+|.|++|+ ++|.+|.+||||++++.++... .+++|+++++++||.|||.|.|.+...
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~-~~~kT~v~~~tlnP~wnE~f~f~v~~~ 85 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGS-VEAQTALKKRQLHTTWEEGLVLPLAEE 85 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEE-EEEECCCCCCCSSEECSSCEEEECCTT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCc-ccEecccCcCCCCCcCCceEEEEecHH
Confidence 467999999999999999999999999 4788899999999999764332 367999999999999999999999877
Q ss_pred CCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcCCC
Q psy1415 564 NLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNSPR 612 (622)
Q Consensus 564 ~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p~ 612 (622)
++....|.|+|||++.++++++||++.|+|.++. +....+||+|.....
T Consensus 86 ~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 86 ELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp SSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 7777789999999999999999999999998765 567788999987543
No 16
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=6.6e-20 Score=170.54 Aligned_cols=112 Identities=22% Similarity=0.279 Sum_probs=98.3
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC----ceeEeeeecCCCCCeeeceeEEcc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK----QKVKTRVLRKTRNPIYNEEFTFTG 372 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~----~~~kT~vi~~t~nP~W~e~f~f~~ 372 (622)
....|+|++++.|.+..+.|.|.|++|+||+.+| .+|.+||||++++.+.. .++||+++++|+||+|||+|.|.
T Consensus 26 ~~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d-~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~- 103 (155)
T 2z0u_A 26 AVGATRIQIALKYDEKNKQFAILIIQLSNLSALL-QQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVS- 103 (155)
T ss_dssp --CCEEEEEEEEEETTTTEEEEEEEEEECGGGTC-CSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEE-
T ss_pred cCCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcc-cCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEE-
Confidence 3457999999999999999999999999999999 79999999999997632 18999999999999999999998
Q ss_pred cCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 373 ITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 373 ~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
+...++....|.|.|| |++.++++++||++.++|+++.
T Consensus 104 v~~~~l~~~~L~~~V~-------------------d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 104 MSYPALHQKTLRVDVC-------------------TTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp CCHHHHHHCEEEEEEE-------------------EECTTSCEEEEEEEEEECTTSC
T ss_pred cCHHHhCcCEEEEEEE-------------------ECCCCCCCcEEEEEEEEHHHcc
Confidence 7766665556666666 9999999999999999999985
No 17
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.81 E-value=6.5e-20 Score=170.28 Aligned_cols=129 Identities=19% Similarity=0.353 Sum_probs=107.3
Q ss_pred ccCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEec
Q psy1415 482 KSQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVP 561 (622)
Q Consensus 482 ~~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~ 561 (622)
.....|++.++++|.+..+.|+|.|++|++|++++ .|.+||||++++.+.+....+++|+++++++||.|||.|.|.+.
T Consensus 9 ~~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 87 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQ 87 (153)
T ss_dssp ----CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECC
T ss_pred ccCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecc
Confidence 34578999999999999999999999999999999 79999999999976554445789999999999999999999996
Q ss_pred CCCCCccEEEEEEEEcCCCCC-CceeEEEEECCCCCC--CcccchhhhhhcCCC
Q psy1415 562 ADNLDSVSLELLLLDWDRVTK-NEVIGRLDLGGDKSS--GTALTHWTDVCNSPR 612 (622)
Q Consensus 562 ~~~l~~~~L~i~V~D~d~~~~-d~~LG~v~i~L~~~~--~~~~~~W~~L~~~p~ 612 (622)
..++.. .|.|+|||++.+++ |++||++.|+|..+. +....+||.|.+...
T Consensus 88 ~~~~~~-~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 88 EEDDQK-RLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp GGGTTS-EEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred cHHhCC-EEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 656654 49999999999887 999999999997544 356667777766543
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=5.2e-19 Score=161.12 Aligned_cols=115 Identities=46% Similarity=0.800 Sum_probs=99.3
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCC-CCCCCEEEEEEeCCC-ceeEeeeecCCCCCeeeceeEEcccC
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPS-GSSDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~-~~sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
....|+|.+++.|.+..+.|.|.|++|++|+.+| .+ +.+||||++++.+++ .+++|+++++++||+|||+|.|..+.
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~ 83 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMD-EQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIP 83 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCB-TTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCC
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcC
Confidence 3457999999999999999999999999999998 54 899999999997654 49999999999999999999995366
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccC
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETY 431 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~ 431 (622)
.+++....|.|.|| |++.++++++||++.++|.++...
T Consensus 84 ~~~~~~~~l~i~V~-------------------d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 84 YTQIQELALHFTIL-------------------SFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp STTGGGCEEEEEEE-------------------EECSSCCCCCCEEEEEECTTCCCT
T ss_pred HHHhccCEEEEEEE-------------------ECCCCCCCcEEEEEEEehhHccCC
Confidence 66665556666666 899889999999999999999743
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4.9e-19 Score=161.91 Aligned_cols=113 Identities=42% Similarity=0.701 Sum_probs=98.7
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccCc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGITP 375 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~~ 375 (622)
.+..|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++. ++||+++++++||+|||+|.|.+++.
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQESTLTVKIMKAQELPAKD-FSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCCEEEEEEEECSSSCCEEEEEEEEESCCCCS-SSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred CceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCC-CCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCH
Confidence 3457999999999999999999999999999998 789999999999976544 89999999999999999999974455
Q ss_pred ccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 376 HQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 376 ~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
+++....|.|.|| |++.++++++||++.++|.++.
T Consensus 88 ~~~~~~~l~i~V~-------------------d~d~~~~~~~iG~~~i~l~~l~ 122 (141)
T 2d8k_A 88 EKVVQRILYLQVL-------------------DYDRFSRNDPIGEVSIPLNKVD 122 (141)
T ss_dssp HHHTTSEEEEEEE-------------------ECCSSSSCEEEEEEEEETTTSC
T ss_pred HHcccCEEEEEEE-------------------ECCCCCCCcEEEEEEEEhhhhc
Confidence 5555555666666 9999899999999999999997
No 20
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=3.7e-20 Score=169.79 Aligned_cols=125 Identities=34% Similarity=0.643 Sum_probs=108.7
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.++++|.+..+.|+|.|++|++|+.++..|.+||||++++.+++. .+++|+++++++||.|||.|.|.+..
T Consensus 17 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~ 94 (143)
T 3f04_A 17 VEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK--KKFETKVHRKTLNPVFNEQFTFKVPY 94 (143)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS--CCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred ccCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC--ccEECccCcCCCCCcCcCeEEEeecH
Confidence 3568999999999999999999999999999999999999999999976543 37799999999999999999999876
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-Ccccchhhhhhc
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCN 609 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~ 609 (622)
.++.+..|.|+|||++.++++++||++.|+|.++. +....+||+|..
T Consensus 95 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 95 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred hhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 65555679999999999999999999999997554 356677887753
No 21
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=7.3e-20 Score=167.44 Aligned_cols=127 Identities=35% Similarity=0.602 Sum_probs=108.4
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEe-cC
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEV-PA 562 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v-~~ 562 (622)
...|+|.+++.|.+..+.|+|.|++|++|+.++..|.+||||++++.+++. .+++|+++++++||.|||.|.|.+ +.
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~~~~ 87 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK--HKLETKVKRKNLNPHWNETFLFEGFPY 87 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS--SEEECCCCTTCSSCCCCEEEEECSCCH
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC--ccEeCceEcCCCCCccccEEEECccCH
Confidence 457999999999999999999999999999999999999999999975433 367999999999999999999985 32
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcCCC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNSPR 612 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p~ 612 (622)
.++....|.|+|||++.++++++||++.|+|.++. +....+||+|.....
T Consensus 88 ~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSGP 138 (141)
T ss_dssp HHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECCC
T ss_pred HHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCCC
Confidence 23334579999999999999999999999998654 345788999887643
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=4.2e-19 Score=162.10 Aligned_cols=123 Identities=22% Similarity=0.465 Sum_probs=102.2
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcccC
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
...|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++ .+++|+++++++||+|||+|.|.++.
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSRE-DGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-SSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcC-CCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 457999999999999999999999999999998 78999999999997644 38999999999999999999997555
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCC--cceeeEEEEeCCccccCCceeeEEEEeec
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSR--DDIVGEVFYSLQSFETYGSTLHFVVFSFD 443 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~~~l~ 443 (622)
..++....|.|.|| |++..++ +++||++.++|.++...+ ...|+.+.
T Consensus 84 ~~~~~~~~l~i~V~-------------------d~d~~~~~~~~~lG~~~i~l~~l~~~~---~~~W~~L~ 132 (141)
T 1v27_A 84 RREFRERMLEITLW-------------------DQARVREEESEFLGEILIELETALLDD---EPHWYKLQ 132 (141)
T ss_dssp TTGGGTCEEEEEEE-------------------EBCSSSSCCBCCCEEEEEEGGGCCCSS---EEEEEECB
T ss_pred HHHhcCCEEEEEEE-------------------ECCCCcCCCCceEEEEEEEccccCCCC---CCceEECc
Confidence 55555556666666 8888876 999999999999987322 33444443
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=7.4e-19 Score=157.99 Aligned_cols=112 Identities=24% Similarity=0.518 Sum_probs=93.7
Q ss_pred cceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcccCc
Q psy1415 299 KLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGITP 375 (622)
Q Consensus 299 ~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~~~ 375 (622)
..|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++ .+++|+++++++||+|||+|.|.++..
T Consensus 3 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 3 LSGQLSIKLWFDKVGHQLIVTILGAKDLPSRE-DGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEESCCCCT-TSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred eeEEEEEEEEEccCCCEEEEEEEEeeCCCCCC-CCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCH
Confidence 35999999999999999999999999999998 78999999999997754 399999999999999999999975555
Q ss_pred ccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCC--cceeeEEEEeCCcccc
Q psy1415 376 HQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSR--DDIVGEVFYSLQSFET 430 (622)
Q Consensus 376 ~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~--d~~iG~~~i~l~~l~~ 430 (622)
.++....|.|.|| |++..++ +++||++.++|.++..
T Consensus 82 ~~~~~~~l~~~V~-------------------d~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 82 REFRERMLEITLW-------------------DQARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp GGGGGCEEEEEEE-------------------EC-------CEEEEEEEEEGGGCCC
T ss_pred HHhcCCeEEEEEE-------------------ECCcCcCcCCceeEEEEEEccccCC
Confidence 5555556666666 8888876 9999999999999873
No 24
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.80 E-value=4.9e-20 Score=167.50 Aligned_cols=125 Identities=34% Similarity=0.578 Sum_probs=107.8
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCC
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPAD 563 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~ 563 (622)
..+|+|.+++.| ..+.|+|.|++|++|+.++..|.+||||++++.+++....+++|+++++++||.|||.|.|.+...
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 357999999999 579999999999999999999999999999997654444578999999999999999999998754
Q ss_pred CCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCC
Q psy1415 564 NLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSP 611 (622)
Q Consensus 564 ~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p 611 (622)
+. ...|.|+|||++.++++++||++.|+|.++...+..+||+|.+..
T Consensus 80 ~~-~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~~ 126 (137)
T 3rdl_A 80 DK-DRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPASGWYKLLNQE 126 (137)
T ss_dssp GG-GCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSCEEEEEECBCHH
T ss_pred hc-CCEEEEEEEECCCCCCCceEEEEEEeHHHhccCccCceEECcCcc
Confidence 44 346999999999999999999999999866656678898887543
No 25
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=2.3e-19 Score=163.42 Aligned_cols=128 Identities=27% Similarity=0.520 Sum_probs=108.8
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCC-CCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEE-e
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVT-GLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-V 560 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~-g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~-v 560 (622)
....|+|.+++.|.+..+.|.|.|++|++|++++.. |.+||||++++.+++. .+++|+++++++||.|||.|.|. +
T Consensus 5 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~--~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK--HKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC--SEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CCccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC--ceEecCcCcCCCCCcEeeEEEEcCc
Confidence 345799999999999999999999999999999985 8999999999976433 47899999999999999999996 7
Q ss_pred cCCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCC-ccc-chhhhhhcCCC
Q psy1415 561 PADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSG-TAL-THWTDVCNSPR 612 (622)
Q Consensus 561 ~~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~-~~~-~~W~~L~~~p~ 612 (622)
+..++....|.|+|||++.++++++||++.|+|.++.. .+. ..|++|...+.
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~ 136 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGPS 136 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSSS
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCCC
Confidence 76666667899999999999999999999999986543 333 45688776543
No 26
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.80 E-value=6.7e-20 Score=167.86 Aligned_cols=126 Identities=26% Similarity=0.449 Sum_probs=105.0
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEE-ec
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-VP 561 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~-v~ 561 (622)
....|+|.+++.|.+..+.|+|.|++|++|+.++..|.+||||++++.+++....+++|+++++++||.|||.|.|. +.
T Consensus 12 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 12 ATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp --CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 45689999999999999999999999999999999999999999999764444457899999999999999999998 65
Q ss_pred CCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhh
Q psy1415 562 ADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVC 608 (622)
Q Consensus 562 ~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~ 608 (622)
..++....|.|+|||++.++++++||++.|+|.++......+|.-.+
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L 138 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICL 138 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEEC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEec
Confidence 44443457999999999999999999999999866554444444333
No 27
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=1.3e-19 Score=164.52 Aligned_cols=121 Identities=23% Similarity=0.406 Sum_probs=99.5
Q ss_pred eeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEE-ecCCCCCcc
Q psy1415 490 LLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFE-VPADNLDSV 568 (622)
Q Consensus 490 ~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~-v~~~~l~~~ 568 (622)
-+.+.|....+.|+|.|++|++|+. +.+|.+||||++++.+++....++||+++++++||.|||.|.|. +...++...
T Consensus 10 ~~~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~ 88 (134)
T 2b3r_A 10 AVKLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQR 88 (134)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTC
T ss_pred EEEEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcC
Confidence 3444455567999999999999997 77899999999999765444457899999999999999999999 775555556
Q ss_pred EEEEEEEEcCCCCCCceeEEEEECCCCCCC-cccchhhhhhcCC
Q psy1415 569 SLELLLLDWDRVTKNEVIGRLDLGGDKSSG-TALTHWTDVCNSP 611 (622)
Q Consensus 569 ~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~-~~~~~W~~L~~~p 611 (622)
.|.|+|||++.++++++||++.|+|.++.. ....+||+|.+.+
T Consensus 89 ~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 89 ELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAAT 132 (134)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC--
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCcc
Confidence 799999999999999999999999986543 5667888887654
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.79 E-value=1.2e-18 Score=159.43 Aligned_cols=115 Identities=35% Similarity=0.687 Sum_probs=96.7
Q ss_pred CCCCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEc
Q psy1415 295 NAEGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFT 371 (622)
Q Consensus 295 ~~~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~ 371 (622)
......|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.++. .++||+++++++||+|||+|.|.
T Consensus 10 ~~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~ 88 (142)
T 2chd_A 10 DQATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMD-SNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYH 88 (142)
T ss_dssp ----CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCC-TTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEE
T ss_pred CCCCccceEEEEEEEeCCCCEEEEEEEEecCCCCCC-CCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEc
Confidence 445567999999999999999999999999999998 78999999999997643 38999999999999999999996
Q ss_pred ccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 372 GITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 372 ~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
.+...++....|.|.|| |++.++++++||++.++|.++.
T Consensus 89 ~~~~~~~~~~~l~i~V~-------------------d~d~~~~d~~iG~~~i~l~~l~ 127 (142)
T 2chd_A 89 GITEEDMQRKTLRISVC-------------------DEDKFGHNEFIGETRFSLKKLK 127 (142)
T ss_dssp SCCHHHHHHCEEEEEEE-------------------EECTTSCEEEEEEEEEEGGGCC
T ss_pred ccCHHHccCCEEEEEEE-------------------ECCCCCCCcEEEEEEEEHHHcC
Confidence 45544444445666655 9999999999999999999987
No 29
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=1.3e-18 Score=159.35 Aligned_cols=111 Identities=44% Similarity=0.784 Sum_probs=99.2
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccCcc
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGITPH 376 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~~~ 376 (622)
...|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++. +++|+++++++||+|||+|.|. +...
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~ 95 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALD-MGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYS 95 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBG-GGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEEC-CCHH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCC-CCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEe-ecHh
Confidence 457999999999999999999999999999998 788999999999976554 8999999999999999999997 6666
Q ss_pred cCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 377 QLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 377 ~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
++....|.|.|| |++.++++++||++.++|.++.
T Consensus 96 ~l~~~~L~i~V~-------------------d~d~~~~~~~iG~~~i~l~~l~ 129 (143)
T 3f04_A 96 ELGGKTLVMAVY-------------------DFDRFSKHDIIGEFKVPMNTVD 129 (143)
T ss_dssp HHTTCEEEEEEE-------------------ECCSSSCCEEEEEEEEEGGGCC
T ss_pred hcCCCEEEEEEE-------------------eCCCCCCCceEEEEEEEHHHcc
Confidence 666666666666 9999899999999999999997
No 30
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=2.1e-18 Score=159.90 Aligned_cols=113 Identities=44% Similarity=0.781 Sum_probs=98.7
Q ss_pred CCCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccC
Q psy1415 296 AEGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 296 ~~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
.....|+|.+++.|.+..+.|.|+|++|++|+.++ .++.+||||++++.+++. .+||+++++++||+|||+|.|. +.
T Consensus 24 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 101 (152)
T 1rsy_A 24 EEEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALD-MGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VP 101 (152)
T ss_dssp --CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-TTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEEC-CC
T ss_pred CCCCceEEEEEEEEeCCCCEEEEEEEEeECCCCcc-CCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEe-ec
Confidence 34467999999999999999999999999999998 789999999999986544 8999999999999999999997 66
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
..++....|.|.|| |++.++++++||++.++|.++.
T Consensus 102 ~~~l~~~~L~i~V~-------------------d~d~~~~~~~iG~~~i~l~~l~ 137 (152)
T 1rsy_A 102 YSELGGKTLVMAVY-------------------DFDRFSKHDIIGEFKVPMNTVD 137 (152)
T ss_dssp HHHHTTCEEEEEEE-------------------ECCSSSCCEEEEEEEEEGGGCC
T ss_pred HHHcCCCEEEEEEE-------------------ECCCCCCCcEEEEEEEEchhcc
Confidence 66655556666666 9999889999999999999986
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.79 E-value=2.2e-18 Score=160.99 Aligned_cols=111 Identities=34% Similarity=0.630 Sum_probs=97.6
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|+|.+++.|.+..+.|.|.|++|+||+.++ .++.+||||++++.+++. .++|+++++++||+|||+|.|. +
T Consensus 8 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d-~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 85 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMD-VGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE-V 85 (159)
T ss_dssp GGCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-TTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEE-C
T ss_pred cCcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCcc-CCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEE-c
Confidence 3457999999999999999999999999999999 789999999999976543 7899999999999999999997 6
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCcc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSF 428 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l 428 (622)
...++....|.|.|| |++.++++++||++.+++..+
T Consensus 86 ~~~~l~~~~l~i~V~-------------------d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 86 PFEQIQKVQVVVTVL-------------------DYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp CGGGGGGCEEEEEEE-------------------ECCSSSCCEEEEEEEEETTCC
T ss_pred CHHHhCCcEEEEEEE-------------------ECCCCCCCceEEEEEECCCCC
Confidence 666665556666666 999989999999999999864
No 32
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=2.1e-19 Score=166.08 Aligned_cols=125 Identities=31% Similarity=0.552 Sum_probs=106.4
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
....|+|.+++.|. .+.|+|.|++|++|+.++..|.+||||++++.+++....+++|+++++++||.|||.|.|.+..
T Consensus 16 ~~~~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 16 MERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp -CTTCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CCcceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 45679999999984 6889999999999999999999999999999765443457899999999999999999999875
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNS 610 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~ 610 (622)
.+.. ..|.|+|||++.++++++||++.|+|.++......+||+|.+.
T Consensus 94 ~~~~-~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~ 140 (149)
T 1a25_A 94 SDKD-RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 140 (149)
T ss_dssp GGGG-CEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred ccCC-CEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence 4443 4699999999999999999999999986655567788888754
No 33
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=161.06 Aligned_cols=113 Identities=37% Similarity=0.625 Sum_probs=98.8
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|+|.+++.|.+..+.|.|.|++|++|+.++..++.+||||++++.+++. +++|+++++++||+|||+|.|. +
T Consensus 6 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 84 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYE-I 84 (148)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEE-C
T ss_pred CccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEE-e
Confidence 34579999999999999999999999999998873478999999999986653 8999999999999999999997 6
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
...++....|.|.|| |++.++++++||++.++|+++.
T Consensus 85 ~~~~~~~~~L~~~V~-------------------d~d~~~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 85 PESLLAQRTLQFSVW-------------------HHGRFGRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp CSTTGGGCEEEEEEE-------------------EECGGGCEEEEEEEEEEHHHHH
T ss_pred ChhHhCceEEEEEEE-------------------ECCCCcCCcEEEEEEEEccccc
Confidence 666665556666666 8998899999999999999986
No 34
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=99.78 E-value=1.6e-21 Score=176.43 Aligned_cols=92 Identities=35% Similarity=0.410 Sum_probs=88.5
Q ss_pred eccCCchhccceeccccccCCccccccccccCCChh---hhh----cCCCCCccCcccchhhHHHHHHHHHHHHHHHHHH
Q psy1415 41 RRRSSPLEAKKLALSQMTLKRPTAVRSPAAAGPNSH---YLK----KSPSPTYATPVANQRVEEYKRQIKQLAVKLKEAE 113 (622)
Q Consensus 41 ~~~k~~e~~~kl~~~e~~l~r~e~~r~~~~e~~~~~---~l~----~lk~~~~~~~~~~~~e~~~~~~i~~l~~~lkeae 113 (622)
.+|||+|++| +|+||+|||+ |+++|++++.+ +|+ |||||++++++|+++++.|+++|+.|+++||+||
T Consensus 16 ad~KyeEvaR----~E~dLEraEE-Rae~aE~k~~eLEeeL~~v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE 90 (155)
T 2efr_A 16 NYHLENEVAR----LKKLLERAEE-RAELSEGKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAE 90 (155)
T ss_dssp HHHHHHHHHH----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999 9999999999 99999999888 777 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccc
Q psy1415 114 ARAEFAEKTVKKLQKEVDRLEVSG 137 (622)
Q Consensus 114 ~rae~ae~~~~~l~~~~~~le~~~ 137 (622)
+|||||||+|.+||++||+|||..
T Consensus 91 ~RAE~AERsv~kLEk~id~lEd~L 114 (155)
T 2efr_A 91 TRAEFAERSVTKLEKSIDDLEDEL 114 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999864
No 35
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.78 E-value=2.2e-18 Score=156.57 Aligned_cols=109 Identities=36% Similarity=0.644 Sum_probs=96.3
Q ss_pred ceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEcccCcc
Q psy1415 300 LGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGITPH 376 (622)
Q Consensus 300 ~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~~~~ 376 (622)
+|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++. +++|++++++.||+|||+|.|. +...
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-v~~~ 79 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMD-IGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFD-IPTE 79 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCB-TTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEE-CCGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcC-CCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEE-CChh
Confidence 5999999999999999999999999999998 788999999999975443 8899999999999999999997 7766
Q ss_pred cCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 377 QLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 377 ~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
++....|.|.|| |++.++++++||++.++++++.
T Consensus 80 ~l~~~~l~~~V~-------------------d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 80 KLRETTIIITVM-------------------DKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGGEEEEEEEE-------------------ECCSSSCCEEEEEEEESSSSCH
T ss_pred hcCceEEEEEEE-------------------ECCCCCCCcEEEEEEEccccCC
Confidence 666656666666 9999899999999999998753
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.78 E-value=6.9e-19 Score=166.53 Aligned_cols=122 Identities=26% Similarity=0.503 Sum_probs=106.4
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCC-CCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDV-TGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~-~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
...|+|.+++.| ..+.|.|.|++|++|+++|. +|.+||||++++.+++....+++|+++++++||.|||.|.|.+..
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP 93 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC
Confidence 457999999999 58999999999999999996 799999999999887776678899999999999999999999854
Q ss_pred CCCCccEEEEEEE-EcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcC
Q psy1415 563 DNLDSVSLELLLL-DWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNS 610 (622)
Q Consensus 563 ~~l~~~~L~i~V~-D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~ 610 (622)
. ...|.|+|| |++.++++++||++.|+|.++. +....+||+|...
T Consensus 94 ~---~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 94 Q---GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp T---TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred C---CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 3 457999999 9999999999999999998665 5677889998765
No 37
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=4e-18 Score=155.36 Aligned_cols=109 Identities=18% Similarity=0.352 Sum_probs=95.3
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC-c-eeEeeeecCCCCCeeeceeEEcccC
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK-Q-KVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~-~-~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
....|+|++++.|.+..+.|.|.|++|++ +| .++.+||||++++.+++ . .++|+++++++||+|||+|.|. +.
T Consensus 9 ~~~~G~l~~sl~y~~~~~~L~V~v~~a~~---~d-~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~-v~ 83 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKAELFVTRLEAVT---SN-HDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLP-LA 83 (138)
T ss_dssp CSSCCEEEEEEEEETTTTEEEEEEEEEEC---CC-CSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEE-CC
T ss_pred CCcceEEEEEEEEeCCCCEEEEEEEEEEc---CC-CCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEE-ec
Confidence 34579999999999999999999999993 56 68899999999997643 3 7899999999999999999998 77
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
..++....|.|.|| |++.++++++||++.++|.++.
T Consensus 84 ~~~l~~~~L~~~V~-------------------d~d~~~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 84 EEELPTATLTLTLR-------------------TCDRFSRHSVAGELRLGLDGTS 119 (138)
T ss_dssp TTSSTTCEEEEEEE-------------------ECCSSCTTSCSEEEEEESSSSS
T ss_pred HHHcCCCEEEEEEE-------------------ECCCCCCCcEEEEEEEEccccc
Confidence 77766666777766 9999999999999999999986
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.77 E-value=3.1e-18 Score=158.80 Aligned_cols=110 Identities=36% Similarity=0.568 Sum_probs=90.4
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++. ++||+++++++||+|||+|.|. +
T Consensus 13 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 90 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSD-VSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFD-I 90 (153)
T ss_dssp ---CCEEEEEEEEETTTTEEEEEEEEEESCC-------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEE-C
T ss_pred CccccEEEEEEEEcCCCCEEEEEEEEeECCCCcC-CCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEE-C
Confidence 4467999999999999999999999999999998 789999999999976554 7899999999999999999997 6
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQS 427 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~ 427 (622)
...++....|.|.|| |++.++++++||++.++++.
T Consensus 91 ~~~~l~~~~l~v~V~-------------------d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 91 PCESLEEISVEFLVL-------------------DSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CSSSSTTEEEEEEEE-------------------ECCTTSCCEEEEEEEESTTC
T ss_pred CHHHhCceEEEEEEE-------------------eCCCCCCCcEEEEEEECCCC
Confidence 666665556666666 99988999999999999988
No 39
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.3e-18 Score=157.49 Aligned_cols=114 Identities=36% Similarity=0.586 Sum_probs=96.8
Q ss_pred CCCcceEEEEEEEEECCCCEEEEEEEEeeCCCCC-CC-----CCCCCCCEEEEEEeCCC-ceeEeeeecCCCCCeeecee
Q psy1415 296 AEGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIK-DT-----PSGSSDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEF 368 (622)
Q Consensus 296 ~~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~-d~-----~~~~sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f 368 (622)
.....|+|.+++.|.+..+.|.|+|++|++|+.+ +. ..+.+||||++++.+++ .+++|+++++++||+|||+|
T Consensus 8 ~~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f 87 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERY 87 (147)
T ss_dssp SCCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCC
T ss_pred CCCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeE
Confidence 3456799999999999999999999999999984 31 23589999999998654 48999999999999999999
Q ss_pred EEcccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 369 TFTGITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 369 ~f~~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
.|. +...++....|.|.|| |++.++++++||++.++|.++.
T Consensus 88 ~f~-v~~~~l~~~~L~~~V~-------------------d~d~~~~~~~iG~~~i~l~~l~ 128 (147)
T 2enp_A 88 TFE-IPFLEAQRRTLLLTVV-------------------DFDKFSRHCVIGKVSVPLCEVD 128 (147)
T ss_dssp EEC-CCHHHHHHSEEEEEEE-------------------CCSTTCCSCCCEEEEEETTTSC
T ss_pred EEE-eChHHhccCEEEEEEE-------------------ECCCCcCCcEEEEEEEechhcC
Confidence 997 6655555456666666 9999899999999999999996
No 40
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.3e-18 Score=156.56 Aligned_cols=111 Identities=36% Similarity=0.609 Sum_probs=95.6
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|+|++++.|.+..+.|.|.|++|++|+.++ .++ +||||++++.+++ .+++|+++++++||+|||+|.|. +
T Consensus 7 ~~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d-~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 83 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFS-EDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFS-V 83 (142)
T ss_dssp SCSSCEEEEEEEEETTTTEEEEEEEEEECCCCSS-TTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEEC-C
T ss_pred CCCcceEEEEEEEeCCCCEEEEEEEEeECCCCCC-CCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEE-e
Confidence 4457999999999999999999999999999998 688 9999999997654 38999999999999999999997 6
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCC--cceeeEEEEeCCccc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSR--DDIVGEVFYSLQSFE 429 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~--d~~iG~~~i~l~~l~ 429 (622)
...++....|.|.|| |++.+++ +++||++.++|+.+.
T Consensus 84 ~~~~l~~~~L~i~V~-------------------d~d~~~~~~~~~iG~~~i~l~~~~ 122 (142)
T 2dmg_A 84 SLPEVQRRTLDVAVK-------------------NSGGFLSKDKGLLGKVLVALASEE 122 (142)
T ss_dssp CHHHHHHCEEEEEEE-------------------ECCCSSCCSCCCCEEEEEECCCST
T ss_pred cHHHhCcCEEEEEEE-------------------ECCCccccCCcEEEEEEEeccccc
Confidence 665555556666666 8887763 579999999999986
No 41
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.1e-19 Score=166.38 Aligned_cols=125 Identities=29% Similarity=0.517 Sum_probs=104.0
Q ss_pred CCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeE---------eeEeeeeeccCCCCCeeec
Q psy1415 484 QGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQR---------VAKKKTHVKKRTLNPVYNE 554 (622)
Q Consensus 484 ~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~---------~~~~kT~~~~~tlnP~wne 554 (622)
...|+|.+++.|. .+.|+|.|++|++|+++|..|.+||||++++.+.... ..+++|+++++++||.|||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 4589999999997 7899999999999999999999999999999543211 1357899999999999999
Q ss_pred EEEEE-ecCCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcC
Q psy1415 555 SFVFE-VPADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNS 610 (622)
Q Consensus 555 ~f~f~-v~~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~ 610 (622)
.|.|. +...++....|.|+|||++.++++++||++.|+|.++. +....+||+|...
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 99997 65444445679999999999999999999999997654 3556678877654
No 42
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.77 E-value=8.4e-18 Score=158.18 Aligned_cols=112 Identities=32% Similarity=0.550 Sum_probs=98.3
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|+|.+++.|.+..+.|.|.|++|++|+.++ .++.+||||++++.+++ .+++|+++++++||+|||+|.|. +
T Consensus 20 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d-~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 97 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMD-ANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD-I 97 (166)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS-TTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEE-C
T ss_pred cCccceEEEEEEEECCCCEEEEEEEEeECCCCcc-CCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEE-c
Confidence 4567999999999999999999999999999998 78999999999997643 48999999999999999999997 6
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
...+++...|.|.|| |++.++++++||++.+++.++.
T Consensus 98 ~~~~l~~~~L~i~V~-------------------d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 98 KHSDLAKKSLDISVW-------------------DYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp CGGGGGGCEEEEEEE-------------------ECCSSSCCEEEEEEEEETTCCH
T ss_pred chHhcCCCEEEEEEE-------------------ECCCCCCCcEEEeEEEecccCC
Confidence 666666666666666 9999899999999999999863
No 43
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=7.2e-19 Score=161.98 Aligned_cols=126 Identities=28% Similarity=0.457 Sum_probs=105.6
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCC-CCC------CCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecE
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKM-DVT------GLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNES 555 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~-d~~------g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~ 555 (622)
....|+|.+++.|.+..+.|+|.|++|++|+.. +.+ |.+||||++++.+++. .+++|+++++++||.|||.
T Consensus 9 ~~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 9 KYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK--NSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp CCCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS--SCEECCCCCSCSSCCCCBC
T ss_pred CCcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC--cceEeecccCCCCCeEeee
Confidence 356899999999999999999999999999984 443 5899999999975433 3679999999999999999
Q ss_pred EEEEecCCCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCC-cccchhhhhhcC
Q psy1415 556 FVFEVPADNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSG-TALTHWTDVCNS 610 (622)
Q Consensus 556 f~f~v~~~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~-~~~~~W~~L~~~ 610 (622)
|.|.+...++....|.|+|||++.++++++||++.|+|.++.. .....|+.|...
T Consensus 87 f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 87 YTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp CEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999875544455799999999999999999999999986543 445678877754
No 44
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=3.1e-18 Score=156.64 Aligned_cols=110 Identities=35% Similarity=0.637 Sum_probs=94.7
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC------------ceeEeeeecCCCCCeee
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK------------QKVKTRVLRKTRNPIYN 365 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~------------~~~kT~vi~~t~nP~W~ 365 (622)
...|+|.+++.|. .+.|.|.|++|++|+.+| .+|.+||||++++.++. .+++|+++++++||+||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d-~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wn 80 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRD-NNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWN 80 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCS-SSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCC-CCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCC
Confidence 4579999999998 789999999999999999 78999999999996543 26899999999999999
Q ss_pred ceeEEcccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 366 EEFTFTGITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 366 e~f~f~~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+|.|..+..+++....|.|.|| |++.++++++||++.++|.++.
T Consensus 81 e~f~f~~v~~~~l~~~~l~i~V~-------------------d~d~~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 81 QTVIYKSISMEQLMKKTLEVTVW-------------------DYDRFSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp EEEEECSCCHHHHTTCEEEEEEE-------------------EECSSSCEEEEEEEEEETTSCG
T ss_pred CEEEECCcCHHHccCCEEEEEEE-------------------ECCCCCCCceEEEEEEeccccc
Confidence 99999645655555556666666 9999899999999999999986
No 45
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=1.2e-17 Score=154.93 Aligned_cols=110 Identities=25% Similarity=0.504 Sum_probs=92.5
Q ss_pred CCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEccc
Q psy1415 297 EGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGI 373 (622)
Q Consensus 297 ~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~ 373 (622)
....|++.+++.|.+..+.|.|.|++|++|+.++ ++.+||||++++.++. .+++|+++++++||+|||+|.|. +
T Consensus 10 ~~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d--~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v 86 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ--PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFP-V 86 (153)
T ss_dssp ---CCCCEEEEEEEESSSEEEEEEEEEESCCCCS--SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEE-C
T ss_pred cCCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC--CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEe-c
Confidence 4456999999999999999999999999999998 5899999999997654 38999999999999999999997 5
Q ss_pred CcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCC-cceeeEEEEeCCccc
Q psy1415 374 TPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSR-DDIVGEVFYSLQSFE 429 (622)
Q Consensus 374 ~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~-d~~iG~~~i~l~~l~ 429 (622)
...++.. .|.|.|| |++.+++ +++||++.++|.++.
T Consensus 87 ~~~~~~~-~L~i~V~-------------------d~d~~~~~d~~lG~~~i~l~~l~ 123 (153)
T 3fbk_A 87 QEEDDQK-RLLVTVW-------------------NRASQSRQSGLIGCMSFGVKSLL 123 (153)
T ss_dssp CGGGTTS-EEEEEEE-------------------ECCSSGGGCEEEEEEEEEHHHHT
T ss_pred ccHHhCC-EEEEEEE-------------------eCCCCCCCCcEEEEEEEEHHHhc
Confidence 5455433 3555555 9888776 899999999999986
No 46
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=3e-17 Score=148.93 Aligned_cols=108 Identities=37% Similarity=0.684 Sum_probs=91.5
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcccC
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
+..|+|.++++| ..+.|.|.|++|++|+.++ .++.+||||++++.+++ .+++|+++++++||+|||+|.|. +.
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d-~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~-~~ 77 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMD-PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFK-LK 77 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCS-TTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEE-CC
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCC-CCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEE-cC
Confidence 457999999999 5799999999999999998 78999999999997643 38999999999999999999997 44
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
..++ ...|.|.| ||++..+++++||++.++|+++.
T Consensus 78 ~~~~-~~~l~i~v-------------------~d~d~~~~~~~iG~~~i~l~~l~ 112 (137)
T 3rdl_A 78 PSDK-DRRLSVEI-------------------WDWDRTTRNDFMGSLSFGVSELM 112 (137)
T ss_dssp GGGG-GCEEEEEE-------------------EECCSSSCCEEEEEEEEEHHHHH
T ss_pred chhc-CCEEEEEE-------------------EECCCCCCCceEEEEEEeHHHhc
Confidence 3332 22455554 59999999999999999999997
No 47
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.73 E-value=3e-17 Score=148.73 Aligned_cols=106 Identities=30% Similarity=0.545 Sum_probs=88.4
Q ss_pred EEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcccCcccCC
Q psy1415 303 IFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTGITPHQLK 379 (622)
Q Consensus 303 i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~ 379 (622)
+-+.+.|....+.|.|.|++|++|+. + .++.+||||++++.+++ .++||+++++++||+|||+|.|..+...++.
T Consensus 9 ~~~~~~~~~~~~~L~V~V~~a~~L~~-~-~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~ 86 (134)
T 2b3r_A 9 GAVKLSVSYRNGTLFIMVMHIKDLVT-E-DGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLR 86 (134)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCCC-T-TSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHT
T ss_pred EEEEEEEeecCCEEEEEEEEeeCCCC-C-CCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhC
Confidence 34555566678999999999999997 5 68899999999997753 3899999999999999999999635555555
Q ss_pred CcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 380 GSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 380 ~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
...|.|.|| |++.++++++||++.++|+++.
T Consensus 87 ~~~L~~~V~-------------------d~d~~~~~~~lG~~~i~l~~l~ 117 (134)
T 2b3r_A 87 QRELQLSVL-------------------SAESLRENFFLGGITLPLKDFN 117 (134)
T ss_dssp TCEEEEEEE-------------------ECCSSSCCEEEEEEEEEGGGSC
T ss_pred cCEEEEEEE-------------------ECCCCCCCcEEEEEEEEhhhcc
Confidence 556666666 9999999999999999999997
No 48
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=1.2e-16 Score=147.48 Aligned_cols=110 Identities=31% Similarity=0.615 Sum_probs=91.0
Q ss_pred CCCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC---ceeEeeeecCCCCCeeeceeEEcc
Q psy1415 296 AEGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK---QKVKTRVLRKTRNPIYNEEFTFTG 372 (622)
Q Consensus 296 ~~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~---~~~kT~vi~~t~nP~W~e~f~f~~ 372 (622)
.....|+|.++++| ..+.|.|.|++|++|+.++ .++.+||||++++.+++ .++||+++++++||+|||+|.|.
T Consensus 15 ~~~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~- 90 (149)
T 1a25_A 15 SMERRGRIYIQAHI--DREVLIVVVRDAKNLVPMD-PNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQ- 90 (149)
T ss_dssp --CTTCEEEEEEEE--SSSEEEEEEEEEESCCCCS-TTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEE-
T ss_pred CCCcceEEEEEEEe--cCCEEEEEEEEeeCCCCCC-CCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEE-
Confidence 34457999999999 4689999999999999998 78999999999997643 38999999999999999999997
Q ss_pred cCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 373 ITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 373 ~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
+...++ ...|. |+|||++.++++++||++.++|.++.
T Consensus 91 v~~~~~-~~~L~-------------------i~V~d~d~~~~~~~iG~~~i~l~~l~ 127 (149)
T 1a25_A 91 LKESDK-DRRLS-------------------VEIWDWDLTSRNDFMGSLSFGISELQ 127 (149)
T ss_dssp CCSGGG-GCEEE-------------------EEEEECCSSSCCEEEEEEEEEHHHHT
T ss_pred eccccC-CCEEE-------------------EEEEECCCCCCCCEEEEEEEEHHHhC
Confidence 443322 12344 44559999999999999999999987
No 49
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=1.2e-16 Score=150.95 Aligned_cols=107 Identities=32% Similarity=0.547 Sum_probs=89.7
Q ss_pred CcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEcccC
Q psy1415 298 GKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGIT 374 (622)
Q Consensus 298 ~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~~ 374 (622)
...|+|.+++.| ..+.|.|.|++|++|+.+|..++.+||||++++.+++. ++||+++++++||+|||+|.|. +.
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~ 92 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFD-ES 92 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECS-SC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEE-ec
Confidence 456999999999 68999999999999999982268999999999976553 8999999999999999999997 43
Q ss_pred cccCCCcEEEEEEEeeccCCCCCCCcceEEEEE-eccCCCCcceeeEEEEeCCccc
Q psy1415 375 PHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVF-SFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 375 ~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~-d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
.. . ..|.|+|| |++.++++++||++.++|+++.
T Consensus 93 ~~---~-------------------~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~ 126 (171)
T 2q3x_A 93 PQ---G-------------------KVLQVIVWGDYGRMDHKCFMGVAQILLEELD 126 (171)
T ss_dssp CT---T-------------------EEEEEEEEEECSTTCSSEEEEEEEECGGGSC
T ss_pred CC---C-------------------CEEEEEEEEcCCCCCCCCEEEEEEEEHHHcc
Confidence 22 1 34666777 8888899999999999999987
No 50
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.69 E-value=2.6e-17 Score=148.77 Aligned_cols=111 Identities=23% Similarity=0.280 Sum_probs=96.0
Q ss_pred eccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEE
Q psy1415 492 SLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLE 571 (622)
Q Consensus 492 ~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~ 571 (622)
++.|.+..+.|+|.|++|++|++++..|.+||||++++ .+. +++|+++++++||.|||.|.|.+... ...|.
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~--~~~---~~kT~~~~~t~nP~wne~f~f~~~~~---~~~l~ 76 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLEL--GND---RLQTHTVYKNLNPEWNKVFTFPIKDI---HDVLE 76 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEE--TTE---EEECCCCSSCSSCCCCEEEEEEESCT---TCEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEE--CCE---EEEeeeecCCCCCccccEEEEEecCC---CCEEE
Confidence 34578889999999999999999999999999999998 433 56999999999999999999999743 24699
Q ss_pred EEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCC
Q psy1415 572 LLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSP 611 (622)
Q Consensus 572 i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p 611 (622)
|+|||++.++++++||++.|+|.++. .+..+||+|....
T Consensus 77 i~V~d~d~~~~~~~lG~~~i~l~~l~-~~~~~w~~L~~~~ 115 (133)
T 2ep6_A 77 VTVFDEDGDKPPDFLGKVAIPLLSIR-DGQPNCYVLKNKD 115 (133)
T ss_dssp EEEEEEETTEEEEECCBCEEEGGGCC-SSCCEECCCBCSC
T ss_pred EEEEECCCCCCCCeeEEEEEEHHHcc-CCCceEEEeecCC
Confidence 99999999999999999999997654 3557999998643
No 51
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=9.4e-17 Score=146.35 Aligned_cols=113 Identities=27% Similarity=0.401 Sum_probs=95.0
Q ss_pred CccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCC-CccEEEEEEEE
Q psy1415 498 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNL-DSVSLELLLLD 576 (622)
Q Consensus 498 ~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l-~~~~L~i~V~D 576 (622)
..|.|+|.|++|++|+.++. |.+||||++++. +. +++|+++++++||.|||.|.|.+....+ ....|.|+|||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~--~~---~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFK--DE---KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECS--SC---EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEEC--CE---eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 46789999999999999998 999999999983 22 6799999999999999999999976533 34579999999
Q ss_pred cCCCCCCceeEEEEECCCCCC-Ccccchhhh---hhcCCCCcee
Q psy1415 577 WDRVTKNEVIGRLDLGGDKSS-GTALTHWTD---VCNSPRRQIA 616 (622)
Q Consensus 577 ~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~---L~~~p~~~i~ 616 (622)
++.++++++||++.|+|.++. +....+|++ |.+..++...
T Consensus 79 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~ 122 (140)
T 2dmh_A 79 FETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTG 122 (140)
T ss_dssp TTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEE
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCC
Confidence 999999999999999997654 456688998 7776654443
No 52
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.67 E-value=5.1e-16 Score=143.75 Aligned_cols=95 Identities=38% Similarity=0.584 Sum_probs=73.0
Q ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC----ceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK----QKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~----~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
+..+.|.|+|++|++|+.++ .++.+||||++++.+.. ..++|+++++++||+|||+|.|. +... ...|.|.
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~---~~~l~~~ 91 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKD-ILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFR-VHPQ---QHRLLFE 91 (153)
T ss_dssp TTCEEEEEEEEEEESCC--------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEE-ECTT---TCEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCC-CCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEE-ecCC---CCEEEEE
Confidence 34678999999999999998 78899999999996433 38899999999999999999997 3322 2345555
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|| |++.++++++||++.++|.++.
T Consensus 92 V~-------------------d~d~~~~d~~iG~~~i~l~~l~ 115 (153)
T 3b7y_A 92 VF-------------------DENRLTRDDFLGQVDVPLYPLP 115 (153)
T ss_dssp EE-------------------ECCSSSCCEEEEEEEEECCSCC
T ss_pred EE-------------------ECCCCcCCCeeEEEEEEHHHcc
Confidence 55 9999999999999999999987
No 53
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=139.21 Aligned_cols=94 Identities=24% Similarity=0.409 Sum_probs=78.8
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccC-CCcEEEEEEEee
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQL-KGSTLHFVVFSF 390 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-~~~~L~~~V~d~ 390 (622)
..+.|.|.|++|++|+.++ . +.+||||++++ ++++++|+++++++||+|||+|.|. +...++ ....|.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~-~-g~~dpyv~v~~--~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~~~~~~~l~------ 73 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTK-F-GKPDPIVSVIF--KDEKKKTKKVDNELNPVWNEILEFD-LRGIPLDFSSSLG------ 73 (140)
T ss_dssp BCCEEEEEEEEEESCCCCS-S-SCCCEEEEEEC--SSCEEECCCCCSCSSCEEEEEEEEE-CSSCCCCTTCEEE------
T ss_pred CCcEEEEEEEEeeCCCCCC-C-CCCCeEEEEEE--CCEeEEeeeecCCCCCccCcEEEEE-ecccccCCCCEEE------
Confidence 4578999999999999998 5 99999999999 6678999999999999999999997 433221 233444
Q ss_pred ccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 391 DRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 391 d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+|||++..+++++||++.+++.++.
T Consensus 74 -------------i~V~d~d~~~~~~~lG~~~i~l~~l~ 99 (140)
T 2dmh_A 74 -------------IIVKDFETIGQNKLIGTATVALKDLT 99 (140)
T ss_dssp -------------EEEEETTCSSSCCCCEEEEEEGGGTC
T ss_pred -------------EEEEECCCCCCCceEEEEEEEHHHhc
Confidence 44559999999999999999999986
No 54
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.67 E-value=1.3e-16 Score=144.20 Aligned_cols=97 Identities=31% Similarity=0.421 Sum_probs=81.8
Q ss_pred EEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 307 IKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 307 l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
+.|.+..+.|.|.|++|++|+.++ .++.+||||++++ +++.++|+++++++||+|||+|.|.+... ...|.|.
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~--~~~~~kT~~~~~t~nP~wne~f~f~~~~~----~~~l~i~ 78 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAAD-FSGKSDPFCLLEL--GNDRLQTHTVYKNLNPEWNKVFTFPIKDI----HDVLEVT 78 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSS-SSSCCCEEEEEEE--TTEEEECCCCSSCSSCCCCEEEEEEESCT----TCEEEEE
T ss_pred ccccCCceEEEEEEEeeECCCCCC-CCCCcCeEEEEEE--CCEEEEeeeecCCCCCccccEEEEEecCC----CCEEEEE
Confidence 345667889999999999999998 7899999999999 66789999999999999999999973221 2345555
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|| |++..+++++||++.+++.++.
T Consensus 79 V~-------------------d~d~~~~~~~lG~~~i~l~~l~ 102 (133)
T 2ep6_A 79 VF-------------------DEDGDKPPDFLGKVAIPLLSIR 102 (133)
T ss_dssp EE-------------------EEETTEEEEECCBCEEEGGGCC
T ss_pred EE-------------------ECCCCCCCCeeEEEEEEHHHcc
Confidence 54 9998889999999999999986
No 55
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.67 E-value=2.1e-16 Score=146.63 Aligned_cols=106 Identities=22% Similarity=0.290 Sum_probs=88.0
Q ss_pred cCCccEEEEEEEeecCCCCCCC----------CCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCC
Q psy1415 496 QPAANRFTIVVLKARNLPKMDV----------TGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNL 565 (622)
Q Consensus 496 ~~~~g~L~V~I~~A~~L~~~d~----------~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l 565 (622)
....|.|+|.|++|++|+++|. .|.+||||++.+ ++.. +.||+++++|+||.|||.|.|.+..
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l--~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~--- 97 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSV--DQVR--VGQTSTKQKTNKPTYNEEFCANVTD--- 97 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEE--TTEE--EEECCCCSSCSSCEEEEEEEEEEEE---
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEE--CCEe--eEEeeecCCCCCCccCcEEEEEcCC---
Confidence 3456899999999999999883 367999999998 4433 4689999999999999999999863
Q ss_pred CccEEEEEEEEcCCCCCCceeEEEEECCCCCC-----Ccccchhhhhhc
Q psy1415 566 DSVSLELLLLDWDRVTKNEVIGRLDLGGDKSS-----GTALTHWTDVCN 609 (622)
Q Consensus 566 ~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~-----~~~~~~W~~L~~ 609 (622)
...|.|+|||++.+++|++||++.|+|.++. +...+.||+|..
T Consensus 98 -~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 98 -GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp -ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred -CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 2369999999999999999999999997543 245678998853
No 56
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.67 E-value=3.8e-16 Score=144.64 Aligned_cols=112 Identities=23% Similarity=0.326 Sum_probs=87.5
Q ss_pred cCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCC-eEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEE
Q psy1415 496 QPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG-QRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLL 574 (622)
Q Consensus 496 ~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~-~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V 574 (622)
.+..+.|+|.|++|++|+.++..|.+||||++++.+.+ ....+++|+++++++||.|||.|.|.+... ...|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ---QHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT---TCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC---CCEEEEEE
Confidence 34568899999999999999999999999999997532 334578999999999999999999998753 34699999
Q ss_pred EEcCCCCCCceeEEEEECCCCCCCccc-------chhhhhhcC
Q psy1415 575 LDWDRVTKNEVIGRLDLGGDKSSGTAL-------THWTDVCNS 610 (622)
Q Consensus 575 ~D~d~~~~d~~LG~v~i~L~~~~~~~~-------~~W~~L~~~ 610 (622)
||++.++++++||++.|+|.++..... .+||.|...
T Consensus 93 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 135 (153)
T 3b7y_A 93 FDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR 135 (153)
T ss_dssp EECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS
T ss_pred EECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc
Confidence 999999999999999999986554322 489998654
No 57
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.67 E-value=7.5e-16 Score=146.24 Aligned_cols=95 Identities=37% Similarity=0.574 Sum_probs=73.2
Q ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCC----ceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDK----QKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~----~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
...+.|.|.|++|++|+.++ .++.+||||++++.+.. .+++|+++++++||+|||+|.|. +... ...|.|.
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d-~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~-v~~~---~~~L~~~ 79 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKD-ILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFR-VLPQ---RHRILFE 79 (176)
T ss_dssp TTCEEEEEEEEEEESCC----CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEE-ECTT---TCEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcC-CCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEE-EcCC---CCEEEEE
Confidence 45788999999999999998 78999999999996433 37899999999999999999997 3322 2345555
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|| |++.++++++||++.++|..+.
T Consensus 80 V~-------------------d~d~~~~d~~lG~~~i~l~~l~ 103 (176)
T 3m7f_B 80 VF-------------------DENRLTRDDFLGQVDVPLYPLP 103 (176)
T ss_dssp EE-------------------ECC----CEEEEEEEEESCSCC
T ss_pred EE-------------------ECCCCCCCcEEEEEEEEHHHcc
Confidence 55 9999999999999999999997
No 58
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.67 E-value=1.1e-15 Score=140.77 Aligned_cols=92 Identities=28% Similarity=0.496 Sum_probs=78.0
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeec
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFD 391 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d 391 (622)
..+.|.|+|++|++|+.+| .++.+||||++++ +++.++|+++++++||.|||+|.|.+.... ..|.|.||
T Consensus 15 ~~~~L~V~v~~a~~L~~~d-~~g~~dpyv~v~~--~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~----~~l~~~v~--- 84 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKD-KTGSSDPYVTVQV--GKTKKRTKTIYGNLNPVWEENFHFECHNSS----DRIKVRVL--- 84 (148)
T ss_dssp CCEEEEEEEEEEESCCCCS-TTSCCCEEEEEEE--TTEEEECCCCCSCSSCEEEEEEEEEECSTT----CEEEEEEE---
T ss_pred cccEEEEEEEeeeCCCCCC-CCCCcCeEEEEEE--CCEEEECCccCCCCCCCcccEEEEEecCCC----CEEEEEEE---
Confidence 3689999999999999998 7899999999999 778999999999999999999999732221 34555555
Q ss_pred cCCCCCCCcceEEEEEeccCC-----------CCcceeeEEEEeCCccc
Q psy1415 392 RYSRDDIGSTLHFVVFSFDRY-----------SRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 392 ~~~~~d~~~~l~i~v~d~d~~-----------~~d~~iG~~~i~l~~l~ 429 (622)
|++.. +++++||++.++++++.
T Consensus 85 ----------------d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~ 117 (148)
T 3kwu_A 85 ----------------DEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS 117 (148)
T ss_dssp ----------------ECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC
T ss_pred ----------------ECCCCccccccccccCCCCccEEEEEEEHHHCc
Confidence 87775 78999999999999984
No 59
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.66 E-value=2e-16 Score=143.57 Aligned_cols=103 Identities=17% Similarity=0.292 Sum_probs=85.1
Q ss_pred ccEEEEEEEeecCCCCCCCCCC-----------CCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGL-----------ADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDS 567 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~-----------sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~ 567 (622)
.|.|+|.|++|++|+++|..|. +||||++.+ ++.. ..+|+++++++||.|||.|.|.+...
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l--~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~---- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNV--DDSR--IGQTATKQKTNSPAWHDEFVTDVCNG---- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEE--TTEE--EEECCCCSSCSSCEEEEEEEEEEEEE----
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEE--CCeE--eeeeeEECCCcCCccCCEEEEEecCC----
Confidence 5789999999999999886544 999999998 4432 46899999999999999999998743
Q ss_pred cEEEEEEEEcCCCCCCceeEEEEECCCCCCC---cccchhhhhhc
Q psy1415 568 VSLELLLLDWDRVTKNEVIGRLDLGGDKSSG---TALTHWTDVCN 609 (622)
Q Consensus 568 ~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~---~~~~~W~~L~~ 609 (622)
..|.|+|||++.+++|++||++.|+|.++.. ...+.|++|..
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 121 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP 121 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC
Confidence 4699999999999999999999999975433 23367887753
No 60
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.66 E-value=5.5e-16 Score=147.14 Aligned_cols=112 Identities=22% Similarity=0.331 Sum_probs=87.2
Q ss_pred cCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeC-CeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEE
Q psy1415 496 QPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYK-GQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLL 574 (622)
Q Consensus 496 ~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~-~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V 574 (622)
....|.|+|.|++|++|+.++..|.+||||++++.+. +....+++|+++++++||.|||.|.|.+... ...|.|+|
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~---~~~L~~~V 80 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ---RHRILFEV 80 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT---TCEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC---CCEEEEEE
Confidence 3457899999999999999999999999999999753 3344578999999999999999999999743 24699999
Q ss_pred EEcCCCCCCceeEEEEECCCCCCCcccc-------hhhhhhcC
Q psy1415 575 LDWDRVTKNEVIGRLDLGGDKSSGTALT-------HWTDVCNS 610 (622)
Q Consensus 575 ~D~d~~~~d~~LG~v~i~L~~~~~~~~~-------~W~~L~~~ 610 (622)
||++.++++++||++.|+|..+...... +||.|...
T Consensus 81 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 123 (176)
T 3m7f_B 81 FDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR 123 (176)
T ss_dssp EECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCS
T ss_pred EECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc
Confidence 9999999999999999999876543322 79999764
No 61
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.65 E-value=5.7e-16 Score=142.59 Aligned_cols=103 Identities=27% Similarity=0.441 Sum_probs=90.8
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcC
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWD 578 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d 578 (622)
.|.|+|.|++|++|+++|..|.+||||++++ ++ .+++|+++++++||.|||.|.|.+.... ..|.|+|||++
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~---~~l~~~v~d~d 87 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQV--GK---TKKRTKTIYGNLNPVWEENFHFECHNSS---DRIKVRVLDED 87 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE--TT---EEEECCCCCSCSSCEEEEEEEEEECSTT---CEEEEEEEECC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEE--CC---EEEECCccCCCCCCCcccEEEEEecCCC---CEEEEEEEECC
Confidence 6899999999999999999999999999998 33 2679999999999999999999997543 35999999999
Q ss_pred CC-----------CCCceeEEEEECCCCCCCcccchhhhhhcC
Q psy1415 579 RV-----------TKNEVIGRLDLGGDKSSGTALTHWTDVCNS 610 (622)
Q Consensus 579 ~~-----------~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~ 610 (622)
.. +++++||++.|+|..+ .....+||+|...
T Consensus 88 ~~~~~~~~~~~~~~~~~~lG~~~i~l~~l-~~~~~~w~~L~~~ 129 (148)
T 3kwu_A 88 DDIKSRVKQRFKRESDDFLGQTIIEVRTL-SGEMDVWYNLDKR 129 (148)
T ss_dssp CSHHHHHHTTTSSCSSEEEEEEEEEGGGC-CSEEEEEEECBCS
T ss_pred CCccccccccccCCCCccEEEEEEEHHHC-cCCCCEEEEcccC
Confidence 86 7899999999999766 5677899999854
No 62
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.65 E-value=1.2e-16 Score=142.96 Aligned_cols=108 Identities=27% Similarity=0.420 Sum_probs=89.3
Q ss_pred ccEEEEEEEeecCCCCC---CCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKM---DVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLL 575 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~---d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~ 575 (622)
.+.|+|.|++|++|+++ +..|.+||||++++.+.+ ..+++|+++++++||.|||.|.|.+.... ...|.|+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQ--ENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTS--CCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCC--CCEEEEEEE
Confidence 47899999999999985 667999999999984422 24779999999999999999999996443 346999999
Q ss_pred EcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcCC
Q psy1415 576 DWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNSP 611 (622)
Q Consensus 576 D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p 611 (622)
|++.++ +++||++.|+|..+. +....+|++|....
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~ 113 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQVT 113 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETTTE
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCCCc
Confidence 999885 999999999997654 45667899987643
No 63
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.63 E-value=2.7e-16 Score=142.59 Aligned_cols=104 Identities=23% Similarity=0.373 Sum_probs=89.5
Q ss_pred CCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeecc-CCCCCeeecEEEEEecCCCCCccEEEEEEE
Q psy1415 497 PAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLL 575 (622)
Q Consensus 497 ~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~-~tlnP~wne~f~f~v~~~~l~~~~L~i~V~ 575 (622)
...+.|+|.|++|++|+.++..|.+||||++++.+ . +++|++++ +++||.|||.|.|.+.. ....|.|+||
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~--~---~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~ 78 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT--Q---DQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIF 78 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS--C---EEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEEC
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC--c---cceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEE
Confidence 34689999999999999999999999999999833 2 46899998 89999999999999985 2446999999
Q ss_pred EcCCCCCCceeEEEEECCCCCC--Ccccchhhhhh
Q psy1415 576 DWDRVTKNEVIGRLDLGGDKSS--GTALTHWTDVC 608 (622)
Q Consensus 576 D~d~~~~d~~LG~v~i~L~~~~--~~~~~~W~~L~ 608 (622)
|++.+++|++||++.|+|.++. +....+||+|.
T Consensus 79 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 113 (136)
T 1wfj_A 79 DKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV 113 (136)
T ss_dssp CSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE
T ss_pred ECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee
Confidence 9999999999999999997652 34467899987
No 64
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.63 E-value=9.7e-16 Score=142.14 Aligned_cols=94 Identities=27% Similarity=0.334 Sum_probs=76.8
Q ss_pred CCCCEEEEEEEEeeCCCCCCCC---------CCCCCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccCcccCCC
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTP---------SGSSDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGITPHQLKG 380 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~---------~~~sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~ 380 (622)
...+.|.|+|++|++|+++|.. .+.+||||+|++ ++. +.||+++++|+||+|||+|.|. +.. .
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l--~~~~~~kT~v~~ktlnP~WNE~F~f~-v~~----~ 98 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSV--DQVRVGQTSTKQKTNKPTYNEEFCAN-VTD----G 98 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEE--TTEEEEECCCCSSCSSCEEEEEEEEE-EEE----E
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEE--CCEeeEEeeecCCCCCCccCcEEEEE-cCC----C
Confidence 3467899999999999988711 267999999999 665 6899999999999999999997 321 1
Q ss_pred cEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCcccc
Q psy1415 381 STLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFET 430 (622)
Q Consensus 381 ~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~ 430 (622)
..|.|.|| |++.++++++||.+.+++.++..
T Consensus 99 ~~L~~~V~-------------------D~d~~~~dd~iG~~~i~l~~l~~ 129 (157)
T 2fk9_A 99 GHLELAVF-------------------HETPLGYDHFVANCTLQFQELLR 129 (157)
T ss_dssp CEEEEEEE-------------------ECCSSSSCEEEEEEEEEHHHHHH
T ss_pred CEEEEEEE-------------------ECCCCCCCCEEEEEEEEHHHhhc
Confidence 24555555 99999999999999999999873
No 65
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.61 E-value=2e-15 Score=136.97 Aligned_cols=91 Identities=20% Similarity=0.306 Sum_probs=74.8
Q ss_pred CCEEEEEEEEeeCCCCCCCCCCC-----------CCCEEEEEEeCCCc-eeEeeeecCCCCCeeeceeEEcccCcccCCC
Q psy1415 313 ENVLVVTVIKCRDLFIKDTPSGS-----------SDPYVKVHLLPDKQ-KVKTRVLRKTRNPIYNEEFTFTGITPHQLKG 380 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~d~~~~~-----------sDPyv~v~l~~~~~-~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~ 380 (622)
.+.|.|+|++|++|+++| .++. +||||++++ ++. ..+|+++++++||+|||+|.|. +...
T Consensus 5 ~g~L~v~v~~a~~L~~~d-~~~~~~~g~~~~~~~~DPyv~v~l--~~~~~~~T~~~~~t~nP~WnE~f~f~-v~~~---- 76 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTA-WSLRDAVGPRPQTFLLDPYIALNV--DDSRIGQTATKQKTNSPAWHDEFVTD-VCNG---- 76 (136)
T ss_dssp EEEEEEEEEEEESCCCCH-HHHCC-CCSSCCCCCCCEEEEEEE--TTEEEEECCCCSSCSSCEEEEEEEEE-EEEE----
T ss_pred ceEEEEEEEeCcCCCCcc-cccccccccccCCcCcCcEEEEEE--CCeEeeeeeEECCCcCCccCCEEEEE-ecCC----
Confidence 478999999999999887 4443 999999999 555 6899999999999999999996 3211
Q ss_pred cEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCcccc
Q psy1415 381 STLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFET 430 (622)
Q Consensus 381 ~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~ 430 (622)
..|.|.| ||++.+++|++||++.++++++..
T Consensus 77 ~~L~~~V-------------------~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 77 RKIELAV-------------------FHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp CEEEEEE-------------------EECCSSSSCEEEEEEEEEHHHHTS
T ss_pred CEEEEEE-------------------EeCCCCCCCCEEEEEEEEHHHhcc
Confidence 3444555 499999999999999999999873
No 66
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.60 E-value=5.3e-15 Score=133.34 Aligned_cols=91 Identities=18% Similarity=0.285 Sum_probs=75.1
Q ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeeccC
Q psy1415 314 NVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFDRY 393 (622)
Q Consensus 314 ~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d~~ 393 (622)
..|.|+|++|++|+.+| .+|.+||||++++.+++++++|+++++++||+|||+|.|. +... ..|.|
T Consensus 5 ~~L~V~v~~a~~L~~~d-~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~----~~l~~-------- 70 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKD-FFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLY-VGKT----DSITI-------- 70 (132)
T ss_dssp EEEEEEEEEEESCCCCS-TTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEE-EETT----CCEEE--------
T ss_pred EEEEEEEEEeECCCCCC-CCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEE-eCCC----CEEEE--------
Confidence 46899999999999999 7899999999999544469999999999999999999996 3211 12444
Q ss_pred CCCCCCcceEEEEEeccCCCC---cceeeEEEEeCCccc
Q psy1415 394 SRDDIGSTLHFVVFSFDRYSR---DDIVGEVFYSLQSFE 429 (622)
Q Consensus 394 ~~~d~~~~l~i~v~d~d~~~~---d~~iG~~~i~l~~l~ 429 (622)
+|||++..++ +++||++.++++.+.
T Consensus 71 -----------~v~d~d~~~~~~~d~~lG~~~i~l~~l~ 98 (132)
T 3pyc_A 71 -----------SVWNHKKIHKKQGAGFLGCVRLLSNAIS 98 (132)
T ss_dssp -----------EEEEGGGTTSSTTTTEEEEEEECHHHHH
T ss_pred -----------EEEECCCCCCCCCCCceEEEEEeHHHhh
Confidence 4558888776 799999999998884
No 67
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.60 E-value=3e-15 Score=135.64 Aligned_cols=92 Identities=28% Similarity=0.387 Sum_probs=77.3
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeec-CCCCCeeeceeEEcccCcccCCCcEEEEEEEee
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLR-KTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSF 390 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~-~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~ 390 (622)
..+.|.|+|++|++|+..+ .++.+||||++++ +++.++|++++ +++||+|||+|.|. +.. ....|.
T Consensus 8 ~~~~L~v~v~~a~~L~~~d-~~g~~dpyv~v~~--~~~~~kT~~~~~~~~nP~Wne~f~f~-v~~---~~~~l~------ 74 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDAD-FLNNMDPYVQLTC--RTQDQKSNVAEGMGTTPEWNETFIFT-VSE---GTTELK------ 74 (136)
T ss_dssp CEEEEEEEEEEEEECSSCC-SSCSSCCCEEEES--SSCEEECCCCTTCCSSCEEEEEEEEE-EES---SCCEEE------
T ss_pred CcEEEEEEEEeccCCCCcc-cCCCcCceEEEEE--CCccceeEeccCCCCCCccCcEEEEE-ECC---CCCEEE------
Confidence 3567899999999999998 7899999999999 56688999998 89999999999997 321 123444
Q ss_pred ccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 391 DRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 391 d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+|||++.+++|++||++.++|.++.
T Consensus 75 -------------~~V~d~~~~~~d~~lG~~~i~l~~l~ 100 (136)
T 1wfj_A 75 -------------AKIFDKDVGTEDDAVGEATIPLEPVF 100 (136)
T ss_dssp -------------EEECCSSSCTTTCCSEEEEEESHHHH
T ss_pred -------------EEEEECCCCCCCceEEEEEEEHHHhc
Confidence 44559999999999999999999985
No 68
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.60 E-value=1.2e-15 Score=137.54 Aligned_cols=105 Identities=25% Similarity=0.372 Sum_probs=87.4
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcC
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWD 578 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d 578 (622)
...|+|.|++|++|+++|..|.+||||++++.+.+ .+++|+++++++||.|||.|.|.+...+ .|.|+|||++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~----~l~~~v~d~d 76 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG---QCHSTDTVKNTLDPKWNQHYDLYVGKTD----SITISVWNHK 76 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC---CEEECCCCSSCSSCEEEEEEEEEEETTC----CEEEEEEEGG
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC---ceEECCccCCCCCCCccCEEEEEeCCCC----EEEEEEEECC
Confidence 35799999999999999999999999999984322 3679999999999999999999997542 3999999999
Q ss_pred CCCC---CceeEEEEECCCCCC--CcccchhhhhhcC
Q psy1415 579 RVTK---NEVIGRLDLGGDKSS--GTALTHWTDVCNS 610 (622)
Q Consensus 579 ~~~~---d~~LG~v~i~L~~~~--~~~~~~W~~L~~~ 610 (622)
.+++ |++||++.|++..+. .....+|++|...
T Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~ 113 (132)
T 3pyc_A 77 KIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL 113 (132)
T ss_dssp GTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS
T ss_pred CCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeec
Confidence 9876 899999999986442 2344678888765
No 69
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.59 E-value=8.2e-15 Score=130.81 Aligned_cols=105 Identities=23% Similarity=0.452 Sum_probs=80.6
Q ss_pred CCEEEEEEEEeeCCCCC---CCCCCCCCCEEEEEEeCCC-ceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEE
Q psy1415 313 ENVLVVTVIKCRDLFIK---DTPSGSSDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVF 388 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~---d~~~~~sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~ 388 (622)
.+.|.|+|++|++|+.+ + .++.+||||++++.+.+ .+++|+++++++||+|||+|.|. +...+ ...|.|.||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d-~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~--~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGD-MLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFI-LDPNQ--ENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHH-HHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEE-ECTTS--CCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccc-cCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEE-ecCCC--CCEEEEEEE
Confidence 47899999999999984 5 56899999999995432 58999999999999999999997 43222 334555555
Q ss_pred eeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccCCceeeEEEEeec
Q psy1415 389 SFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETYGSTLHFVVFSFD 443 (622)
Q Consensus 389 d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~l~ 443 (622)
|++.. ++++||++.++|.++. .+..+..|+.+.
T Consensus 78 -------------------d~d~~-~~~~iG~~~i~l~~l~--~~~~~~~~~~L~ 110 (126)
T 1rlw_A 78 -------------------DANYV-MDETLGTATFTVSSMK--VGEKKEVPFIFN 110 (126)
T ss_dssp -------------------ECCSS-CCEEEEEEEEEGGGSC--TTCEEEEEEEET
T ss_pred -------------------ECCCC-CCceeEEEEEEHHHcc--CCCcEEEEEEcC
Confidence 88877 4899999999999986 233344455553
No 70
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.57 E-value=9.2e-15 Score=138.22 Aligned_cols=91 Identities=29% Similarity=0.361 Sum_probs=75.0
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeec
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFD 391 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d 391 (622)
..+.|.|+|++|++|+..+ ..+.+||||+|++ +++++||+++++++||+|||+|.|. +.. ...|.|.||
T Consensus 34 ~~~~L~V~V~~A~~L~~~~-~~~~sDPYv~v~~--~~~~~kT~v~~~tlnP~Wne~f~f~-v~~----~~~L~~~V~--- 102 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKK-NWFGPSPYVEVTV--DGQSKKTEKCNNTNSPKWKQPLTVI-VTP----VSKLHFRVW--- 102 (173)
T ss_dssp CCEEEEEEEEEEEECCCC---CCCCCEEEEEEE--TTEEEECCCCSSCSSCEEEEEEEEE-ECT----TCEEEEEEE---
T ss_pred CceEEEEEEEEeECCCCcc-cCCCCCeEEEEEE--CCEEeEccccCCCCCCeECCEEEEE-eCC----CCEEEEEEE---
Confidence 4577999999999999443 2445999999999 6689999999999999999999997 432 334555555
Q ss_pred cCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 392 RYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 392 ~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|++.++++++||++.++|.++.
T Consensus 103 ----------------D~d~~~~dd~lG~~~i~l~~l~ 124 (173)
T 2nq3_A 103 ----------------SHQTLKSDVLLGTAALDIYETL 124 (173)
T ss_dssp ----------------ECCSSSCCEEEEEEEEEHHHHH
T ss_pred ----------------ECCCCCCCceEEEEEEEHHHhc
Confidence 9999999999999999999986
No 71
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.54 E-value=2.5e-14 Score=135.22 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=84.3
Q ss_pred CccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEc
Q psy1415 498 AANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 577 (622)
Q Consensus 498 ~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~ 577 (622)
..+.|+|.|++|++|+..+..+.+||||++++ ++ .++||+++++++||.|||.|.|.+.. ...|.|+|||+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~--~~---~~~kT~v~~~tlnP~Wne~f~f~v~~----~~~L~~~V~D~ 104 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTV--DG---QSKKTEKCNNTNSPKWKQPLTVIVTP----VSKLHFRVWSH 104 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEE--TT---EEEECCCCSSCSSCEEEEEEEEEECT----TCEEEEEEEEC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEE--CC---EEeEccccCCCCCCeECCEEEEEeCC----CCEEEEEEEEC
Confidence 45789999999999994444555999999998 44 37799999999999999999999852 44699999999
Q ss_pred CCCCCCceeEEEEECCCCCCC------cccchhhhhhcC
Q psy1415 578 DRVTKNEVIGRLDLGGDKSSG------TALTHWTDVCNS 610 (622)
Q Consensus 578 d~~~~d~~LG~v~i~L~~~~~------~~~~~W~~L~~~ 610 (622)
+.+++|++||++.|+|.++.. .....|++|...
T Consensus 105 d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 105 QTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp CSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred CCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 999999999999999974331 122569888775
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.47 E-value=6.7e-14 Score=126.09 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=69.8
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeecc-CCCCCeeecEEEEEecCCCCCccEEEEEEEEc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLLDW 577 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~-~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~ 577 (622)
.+.|.|+|++|++|+. .|.+||||++. .. ..+|.+++ +++||.|||.|.|.+... ...|.|+|||+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~-----~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~ 70 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQ-----NVKSTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNK 70 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ET-----TEEEECCCEESSSCEEEEEEEEEECCC---SSEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ec-----CEEEeEecCCCCCceECCEEEEEEeCC---CCeEEEEEEEC
Confidence 5789999999998852 68899999998 22 22444444 699999999999999743 23599999999
Q ss_pred CCCCCCceeEEEEECCCCCCC
Q psy1415 578 DRVTKNEVIGRLDLGGDKSSG 598 (622)
Q Consensus 578 d~~~~d~~LG~v~i~L~~~~~ 598 (622)
+ +++|++||++.|+|.++..
T Consensus 71 d-~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 71 G-LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp C-SSCEEEEEEEEEEGGGSCB
T ss_pred C-CCCCCeEEEEEEEHHHhhh
Confidence 9 8899999999999976543
No 73
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.44 E-value=2.4e-13 Score=121.54 Aligned_cols=88 Identities=20% Similarity=0.351 Sum_probs=75.3
Q ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeec-CCCCCeeeceeEEcccCcccCCCcEEEEEEEeecc
Q psy1415 314 NVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLR-KTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFDR 392 (622)
Q Consensus 314 ~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~-~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d~ 392 (622)
-.|+|.|.+|++|+ +++|||+++.+ .+.++||++++ +++||+|||.|.|. +......+..|.+.|+
T Consensus 21 msL~V~l~~a~~Lp------g~~Dp~akv~F--Rg~k~kTkvi~~~~~npvfnE~F~wp-l~~~ld~~e~L~v~V~---- 87 (144)
T 3l9b_A 21 MALIVHLKTVSELR------GRADRIAKVTF--RGQSFYSRVLENCEDVADFDETFRWP-VASSIDRNEVLEIQIF---- 87 (144)
T ss_dssp EEEEEEEEEEESCC------SCEEEEEEEEE--TTEEEECCCEEEECSCEEEEEEEEEE-ESSCCCTTCEEEEEEE----
T ss_pred EEEEEEEEEecCCC------CCCCCeEEEEE--eccceeeEEeccCCCCceEcceEEec-CCCCCCCCCEEEEEEE----
Confidence 35889999999997 36899999999 67799999998 69999999999997 4445455556666666
Q ss_pred CCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 393 YSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 393 ~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+++++++.+||++.++|+++.
T Consensus 88 ---------------d~~~v~~nrlIG~~~i~Lq~lv 109 (144)
T 3l9b_A 88 ---------------NYSKVFSNKLIGTFRMVLQKVV 109 (144)
T ss_dssp ---------------EECTTSCCEEEEEEEEESHHHH
T ss_pred ---------------ECccccCCCEEEEEEEEhHHhc
Confidence 9999999999999999999997
No 74
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.41 E-value=3.8e-13 Score=148.86 Aligned_cols=113 Identities=22% Similarity=0.323 Sum_probs=95.3
Q ss_pred CCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEE
Q psy1415 497 PAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLD 576 (622)
Q Consensus 497 ~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D 576 (622)
...+.|+|.|++|++|+++|.+|.+||||++++ ++. +++|+++++++||.|||.|.|.+... ....|.|+|||
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~--~~~---~~~T~~~~~t~nP~w~e~f~f~~~~~--~~~~l~~~v~d 456 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISM--GSQ---SYTTRTIQDTLNPKWNFNCQFFIKDL--YQDVLCLTLFD 456 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEE--TTE---EEECCCCSSCSSCEEEEEEEEEESCT--TTCEEEEEEEE
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEE--CCe---eccCCccCCCCCCccCceEEEEecCC--CCCEEEEEEEe
Confidence 356789999999999999999999999999998 332 67999999999999999999998633 44569999999
Q ss_pred cCCCCCCceeEEEEECCCCCCC-cc----cchhhhhhcCCCCcee
Q psy1415 577 WDRVTKNEVIGRLDLGGDKSSG-TA----LTHWTDVCNSPRRQIA 616 (622)
Q Consensus 577 ~d~~~~d~~LG~v~i~L~~~~~-~~----~~~W~~L~~~p~~~i~ 616 (622)
+|.+++|++||++.++|..+.. .. ...|+.|.+.+.+.|.
T Consensus 457 ~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~ 501 (510)
T 3jzy_A 457 RDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVW 501 (510)
T ss_dssp CCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEE
T ss_pred CCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEE
Confidence 9999999999999999975442 12 6789999988887764
No 75
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.40 E-value=2.9e-13 Score=154.87 Aligned_cols=126 Identities=31% Similarity=0.556 Sum_probs=109.0
Q ss_pred cCCCCceeeeccccCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecC
Q psy1415 483 SQGRGEILLSLCWQPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPA 562 (622)
Q Consensus 483 ~~~~G~l~i~l~~~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~ 562 (622)
...+|.|.+++.+ ..+.|.|.+++|++|+++|.+|.+||||++.+.+++....+++|+++++++||.|||.|.|.+..
T Consensus 157 ~~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~ 234 (674)
T 3pfq_A 157 TERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKE 234 (674)
T ss_dssp SCCSCEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred cccccccccccee--ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeeccc
Confidence 3467888888766 46889999999999999999999999999999876555567899999999999999999999876
Q ss_pred CCCCccEEEEEEEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCC
Q psy1415 563 DNLDSVSLELLLLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSP 611 (622)
Q Consensus 563 ~~l~~~~L~i~V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p 611 (622)
.+.. ..|.|+|||+|..++|++||++.+++.++......+|+.|+..-
T Consensus 235 ~~~~-~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~~ 282 (674)
T 3pfq_A 235 SDKD-RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQE 282 (674)
T ss_dssp TTTT-CEEEEEEEECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBCTT
T ss_pred CCcc-ceeeeEEeecccccccccccccccchhhhccCCcccceeecccc
Confidence 5543 45999999999999999999999999877777779999997653
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.39 E-value=5.1e-13 Score=125.35 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=70.2
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeecc-CCCCCeeecEEEEEecCCCCCccEEEEEEEEc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLLDW 577 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~-~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~ 577 (622)
.+.|+|.|++|++|+ ..|.+||||++. .. ..+|++++ +++||.|||.|.|.+... ...|.|+|||+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~-----~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~ 79 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQ-----NVESTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNK 79 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ET-----TEEEECCCEESSSCEEEEEEEEECCCT---TSEEEEEEEEC
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ec-----ceEEEEecCCCCCCCCCCEEEEEeeCC---CCEEEEEEEEC
Confidence 568999999999884 368899999998 22 23555555 699999999999999743 23599999999
Q ss_pred CCCCCCceeEEEEECCCCCCC
Q psy1415 578 DRVTKNEVIGRLDLGGDKSSG 598 (622)
Q Consensus 578 d~~~~d~~LG~v~i~L~~~~~ 598 (622)
+ +++|++||++.|+|.++..
T Consensus 80 d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 80 G-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp C-SSCCEEEEEEEEEGGGSCB
T ss_pred C-CCCCceEEEEEEEHHHhcc
Confidence 9 8899999999999986543
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.37 E-value=1.3e-12 Score=143.86 Aligned_cols=99 Identities=23% Similarity=0.284 Sum_probs=82.2
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcC
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWD 578 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d 578 (622)
.+.|+|.|++|++|+. |.+|.+||||++++ ++. ++||+++++++||.|||.|.|.+.... ....|.|+|||+|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l--~~~---~~kTkvik~tlNP~Wne~f~f~~~~~~-~~~~L~~~V~D~D 465 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFF--GGQ---EFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWDAD 465 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEE--TTE---EEECCCBCSCSSCBCCCCEEEEEEETT-TCCCEEEEEEECC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEE--CCE---eeeeeeecCCCCCCCCeEEEEEEecCC-CCCEEEEEEEECC
Confidence 4789999999999998 99999999999999 343 589999999999999999999864211 2345999999999
Q ss_pred CCCCCceeEEEEECCCCCCCcccchhhhh
Q psy1415 579 RVTKNEVIGRLDLGGDKSSGTALTHWTDV 607 (622)
Q Consensus 579 ~~~~d~~LG~v~i~L~~~~~~~~~~W~~L 607 (622)
.+++|++||++.++|. .+ ....|..|
T Consensus 466 ~~~~dD~LG~~~~~L~--~g-~~~~~~~l 491 (540)
T 3nsj_A 466 YGWDDDLLGSCDRSPH--SG-FHEVTCEL 491 (540)
T ss_dssp SSSCCEEEEEEEECCC--SE-EEEEEEEC
T ss_pred CCCCCCEEEEEEEEee--CC-cEEEEEEc
Confidence 9999999999999986 22 24566653
No 78
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.37 E-value=1e-12 Score=147.89 Aligned_cols=115 Identities=22% Similarity=0.397 Sum_probs=95.6
Q ss_pred CccEEEEEEEeecCCCCCCC--CCCCCcEEEEEEEeCCeEeeEeeeeeccCC-CCCeeecEEEEEecCCCCCccEEEEEE
Q psy1415 498 AANRFTIVVLKARNLPKMDV--TGLADPYVKVYLLYKGQRVAKKKTHVKKRT-LNPVYNESFVFEVPADNLDSVSLELLL 574 (622)
Q Consensus 498 ~~g~L~V~I~~A~~L~~~d~--~g~sDPyV~v~l~~~~~~~~~~kT~~~~~t-lnP~wne~f~f~v~~~~l~~~~L~i~V 574 (622)
..+.|+|.|++|++|+.++. .|.+||||++.+.+......++||++++++ +||.|||.|.|.+..+++. .|.|.|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~--~L~~~V 572 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLA--LVRFMV 572 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGC--EEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCC--EEEEEE
Confidence 45789999999999999884 789999999999653222347799999998 9999999999999866543 599999
Q ss_pred EEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCcee
Q psy1415 575 LDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIA 616 (622)
Q Consensus 575 ~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~ 616 (622)
||+|.++++++||++.|+|..+.. +. +|.+|.+.-|..+.
T Consensus 573 ~D~D~~~~dd~iG~~~ipl~~L~~-G~-r~v~L~d~~g~~~~ 612 (624)
T 1djx_A 573 EDYDSSSKNDFIGQSTIPWNSLKQ-GY-RHVHLLSKNGDQHP 612 (624)
T ss_dssp EECCSSSCCEEEEEEEEEGGGBCC-EE-EEEEEECTTSCEEE
T ss_pred EEcCCCCCCceeEEEEEEHHHcCC-Cc-EEEeCCCCCcCCCC
Confidence 999999999999999999975543 33 59999988777653
No 79
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.37 E-value=1.9e-12 Score=116.56 Aligned_cols=86 Identities=23% Similarity=0.366 Sum_probs=66.0
Q ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeec-CCCCCeeeceeEEcccCcccCCCcEEEEEEEeec
Q psy1415 313 ENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLR-KTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFD 391 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~-~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d 391 (622)
.+.|.|+|++|++|. .++.+||||+++. +..+|++++ +++||+|||+|.|. +... ...|.|.|
T Consensus 4 ~~~L~V~V~~A~~l~----~~g~~DPYv~v~~----~~~kt~~~~~~t~nP~WnE~f~f~-v~~~---~~~L~~~V---- 67 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDG----AQEKFNTYVTLKV----QNVKSTTIAVRGSQPSWEQDFMFE-INRL---DLGLTVEV---- 67 (131)
T ss_dssp CEEEEEEEEEEECSS----CGGGCEEEEEEEE----TTEEEECCCEESSSCEEEEEEEEE-ECCC---SSEEEEEE----
T ss_pred ceEEEEEEEEeECCC----CCCCcCeEEEEEe----cCEEEeEecCCCCCceECCEEEEE-EeCC---CCeEEEEE----
Confidence 468999999999884 2578999999992 334555554 79999999999997 3321 22355555
Q ss_pred cCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCcccc
Q psy1415 392 RYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFET 430 (622)
Q Consensus 392 ~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~ 430 (622)
||++ .++|++||++.++|+++..
T Consensus 68 ---------------~D~d-~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 68 ---------------WNKG-LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp ---------------EECC-SSCEEEEEEEEEEGGGSCB
T ss_pred ---------------EECC-CCCCCeEEEEEEEHHHhhh
Confidence 4998 8899999999999999873
No 80
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.35 E-value=5.9e-13 Score=151.04 Aligned_cols=109 Identities=27% Similarity=0.420 Sum_probs=92.1
Q ss_pred CCccEEEEEEEeecCCCC---CCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEE
Q psy1415 497 PAANRFTIVVLKARNLPK---MDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELL 573 (622)
Q Consensus 497 ~~~g~L~V~I~~A~~L~~---~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~ 573 (622)
+..+.|+|.|++|++|++ +|..|.+||||++++.+... .++||+++++++||+|||.|.|.+.... ...|.|+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~--~k~kTkvik~tlNPvWNEtF~F~v~~~~--~~~L~~~ 90 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD--SRKRTRHFNNDINPVWNETFEFILDPNQ--ENVLEIT 90 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT--CCEECCCCTTCSSCEEEEEEEEEECTTS--CCBCEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC--CeEecceEcCCCCCeeeeEEEEEecCCC--CCEEEEE
Confidence 346899999999999999 88889999999999843212 4779999999999999999999998543 3359999
Q ss_pred EEEcCCCCCCceeEEEEECCCCCC-CcccchhhhhhcC
Q psy1415 574 LLDWDRVTKNEVIGRLDLGGDKSS-GTALTHWTDVCNS 610 (622)
Q Consensus 574 V~D~d~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~ 610 (622)
|||+|.++ |++||++.|+|.++. +....+|++|...
T Consensus 91 V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 91 LMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp EEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred EEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 99999999 999999999998654 4557889999754
No 81
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.32 E-value=3.6e-12 Score=113.91 Aligned_cols=105 Identities=18% Similarity=0.245 Sum_probs=87.9
Q ss_pred EEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeecc-CCCCCeeecEEEEEecCCCCCccEEEEEEEEcCC
Q psy1415 501 RFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKK-RTLNPVYNESFVFEVPADNLDSVSLELLLLDWDR 579 (622)
Q Consensus 501 ~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~-~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d~ 579 (622)
-|+|.|.+|.+|+ |.+|||+++.+ .+ .+++|+++. ++.||.|||.|.|++..+...+..|.|.|+|+++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~F--Rg---~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTF--RG---QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEE--TT---EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEE--ec---cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 3899999999998 68899999999 43 378999998 6999999999999999877778889999999999
Q ss_pred CCCCceeEEEEECCCCCC-CcccchhhhhhcCCCCce
Q psy1415 580 VTKNEVIGRLDLGGDKSS-GTALTHWTDVCNSPRRQI 615 (622)
Q Consensus 580 ~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~~p~~~i 615 (622)
++++++||++.|+|.++. +.....+..|.+...+.+
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~ 128 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAII 128 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEE
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCcc
Confidence 999999999999997433 234445666766666555
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.31 E-value=3.7e-12 Score=140.33 Aligned_cols=89 Identities=26% Similarity=0.393 Sum_probs=74.5
Q ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeecc
Q psy1415 313 ENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFDR 392 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d~ 392 (622)
.+.|.|.|++|++|+. | .+|++||||+|++ +++.+||+++++++||+|||+|.|......
T Consensus 393 ~~~L~V~V~~A~~L~~-D-~~g~sDPYV~v~l--~~~~~kTkvik~tlNP~Wne~f~f~~~~~~---------------- 452 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-D-YTTATDAYLKVFF--GGQEFRTGVVWNNNNPRWTDKMDFENVLLS---------------- 452 (540)
T ss_dssp EEEEEEEEEEEESCCC-S-SCSCCCEEEEEEE--TTEEEECCCBCSCSSCBCCCCEEEEEEETT----------------
T ss_pred ccEEEEEEEEccCCCc-c-cCCCcCeEEEEEE--CCEeeeeeeecCCCCCCCCeEEEEEEecCC----------------
Confidence 3679999999999998 8 7899999999999 667899999999999999999998622211
Q ss_pred CCCCCCCcceEEEEEeccCCCCcceeeEEEEeCC
Q psy1415 393 YSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQ 426 (622)
Q Consensus 393 ~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~ 426 (622)
...+|.|+|||+|..++||+||++.++|.
T Consensus 453 -----~~~~L~~~V~D~D~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 453 -----TGGPLRVQVWDADYGWDDDLLGSCDRSPH 481 (540)
T ss_dssp -----TCCCEEEEEEECCSSSCCEEEEEEEECCC
T ss_pred -----CCCEEEEEEEECCCCCCCCEEEEEEEEee
Confidence 12345566669999999999999999987
No 83
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.30 E-value=8.1e-12 Score=138.16 Aligned_cols=94 Identities=28% Similarity=0.450 Sum_probs=79.0
Q ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEee
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSF 390 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~ 390 (622)
...+.|.|.|++|++|+.+| .+|.+||||++++ ++.+++|+++++++||+|+|+|.|.+ . ......|.|.|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d-~~~~sdpyv~v~~--~~~~~~T~~~~~t~nP~w~e~f~f~~-~--~~~~~~l~~~v--- 454 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACK-PNGKSNPYCEISM--GSQSYTTRTIQDTLNPKWNFNCQFFI-K--DLYQDVLCLTL--- 454 (510)
T ss_dssp --CEEEEEEEEEEESCCCCS-TTSCCCEEEEEEE--TTEEEECCCCSSCSSCEEEEEEEEEE-S--CTTTCEEEEEE---
T ss_pred CCCceEEEEeceeecCCCCC-CCCCCCeEEEEEE--CCeeccCCccCCCCCCccCceEEEEe-c--CCCCCEEEEEE---
Confidence 35678999999999999999 7899999999999 77799999999999999999999973 2 22233455555
Q ss_pred ccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 391 DRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 391 d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
||+|..++|++||++.++++++.
T Consensus 455 ----------------~d~d~~~~~d~lG~~~~~l~~l~ 477 (510)
T 3jzy_A 455 ----------------FDRDQFSPDDFLGRTEIPVAKIR 477 (510)
T ss_dssp ----------------EECCSSSSCCEEEEEEEEHHHHH
T ss_pred ----------------EeCCCCCCCCceEEEEEEHHHhc
Confidence 49999999999999999999987
No 84
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.29 E-value=9.7e-12 Score=116.61 Aligned_cols=87 Identities=22% Similarity=0.343 Sum_probs=67.2
Q ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCceeEeeeec-CCCCCeeeceeEEcccCcccCCCcEEEEEEEeec
Q psy1415 313 ENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQKVKTRVLR-KTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFD 391 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~~~kT~vi~-~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d 391 (622)
.+.|.|+|++|++|+ .++.+||||+++. +..||++++ +++||+|||+|.|. +... ...|.|.||
T Consensus 13 ~~~L~V~V~~A~~l~----~~g~~DPYV~v~~----~~~kt~~~~~~t~nP~WnE~f~f~-v~~~---~~~L~~~V~--- 77 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG----AQEKFNTYVTLKV----QNVESTTIAVRGSQPSWEQDFMFE-INRL---DLGLTVEVW--- 77 (167)
T ss_dssp CCEEEEEEEEEECSS----CGGGCEEEEEEEE----TTEEEECCCEESSSCEEEEEEEEE-CCCT---TSEEEEEEE---
T ss_pred eEEEEEEEEEEECCC----CCCCCCeEEEEEe----cceEEEEecCCCCCCCCCCEEEEE-eeCC---CCEEEEEEE---
Confidence 457999999999883 2678999999992 345677665 69999999999997 3321 223555555
Q ss_pred cCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccC
Q psy1415 392 RYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETY 431 (622)
Q Consensus 392 ~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~ 431 (622)
|++ .++|++||++.++|.++...
T Consensus 78 ----------------D~d-~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 78 ----------------NKG-LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp ----------------ECC-SSCCEEEEEEEEEGGGSCBC
T ss_pred ----------------ECC-CCCCceEEEEEEEHHHhccc
Confidence 998 88999999999999998743
No 85
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=4.2e-11 Score=136.86 Aligned_cols=127 Identities=29% Similarity=0.561 Sum_probs=100.2
Q ss_pred cCCCCCCCcceEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeece
Q psy1415 291 DCDGNAEGKLGQIFFKIKYQEKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEE 367 (622)
Q Consensus 291 ~~~~~~~~~~G~i~~~l~~~~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~ 367 (622)
.+..+.....|.|.+++.+ ..+.|.|.+++|++|..+| .+|.+||||++++.+++. +++|+++++++||+|||+
T Consensus 151 ~C~~d~~~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d-~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~ 227 (674)
T 3pfq_A 151 LCGTDHTERRGRIYIQAHI--DREVLIVVVRDAKNLVPMD-PNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNET 227 (674)
T ss_dssp CSSSCSSCCSCEEEEEEEE--CSSEEEEEEEEEESCCCCS-TTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEE
T ss_pred cccccccccccccccccee--ccceeeeeeecccccCCCC-cccccCcccccccccCccccccccccccccccCCCccce
Confidence 3444555667899888877 4789999999999999999 799999999999977653 899999999999999999
Q ss_pred eEEcccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccCCceeeEEEEeecc
Q psy1415 368 FTFTGITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETYGSTLHFVVFSFDR 444 (622)
Q Consensus 368 f~f~~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~l~~ 444 (622)
|.|. +...+ ....|.++|||+|..+++++||++.++++++...+. ..|+.+..
T Consensus 228 f~f~-~~~~~--------------------~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~w~~Lls 280 (674)
T 3pfq_A 228 FRFQ-LKESD--------------------KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGV---DGWFKLLS 280 (674)
T ss_dssp EEEE-CCSTT--------------------TTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCCE---EEEEECBC
T ss_pred eeee-cccCC--------------------ccceeeeEEeecccccccccccccccchhhhccCCc---ccceeecc
Confidence 9997 33322 223355556699999999999999999999974432 44555543
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.24 E-value=4e-11 Score=134.88 Aligned_cols=96 Identities=25% Similarity=0.382 Sum_probs=78.3
Q ss_pred CCCEEEEEEEEeeCCCCCCC-CCCCCCCEEEEEEeCC---CceeEeeeecCC-CCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 312 KENVLVVTVIKCRDLFIKDT-PSGSSDPYVKVHLLPD---KQKVKTRVLRKT-RNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~-~~~~sDPyv~v~l~~~---~~~~kT~vi~~t-~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
..+.|.|.|++|++|+..+. .++.+||||+|.+.+. ..++||++++++ +||+|||+|.|. +...++ ..|.|.
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~-v~~~el--~~L~~~ 571 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFE-VTVPDL--ALVRFM 571 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEE-ESCGGG--CEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEE-EecCCC--CEEEEE
Confidence 34679999999999998872 2688999999999542 238899999998 999999999997 444433 346666
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|| |+|..+++++||++.++|..+.
T Consensus 572 V~-------------------D~D~~~~dd~iG~~~ipl~~L~ 595 (624)
T 1djx_A 572 VE-------------------DYDSSSKNDFIGQSTIPWNSLK 595 (624)
T ss_dssp EE-------------------ECCSSSCCEEEEEEEEEGGGBC
T ss_pred EE-------------------EcCCCCCCceeEEEEEEHHHcC
Confidence 66 9998899999999999999986
No 87
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=99.22 E-value=1.4e-14 Score=131.18 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=66.1
Q ss_pred eccCCchhccceeccccccCCccccccccccCCChh---hhh----cCCCCCccCcccchhhHHHHHHHHHHHHHHHH
Q psy1415 41 RRRSSPLEAKKLALSQMTLKRPTAVRSPAAAGPNSH---YLK----KSPSPTYATPVANQRVEEYKRQIKQLAVKLKE 111 (622)
Q Consensus 41 ~~~k~~e~~~kl~~~e~~l~r~e~~r~~~~e~~~~~---~l~----~lk~~~~~~~~~~~~e~~~~~~i~~l~~~lke 111 (622)
.+|||+|++|||+++|++|+||++ |++.+++++.+ +|+ |||||++++++|+++++.|+++|+.|+.+|||
T Consensus 71 adrKyeE~~RKl~~~E~dLeraee-Rae~aE~k~~eLEeeL~~~~~nlKsLE~~eekas~rE~~yee~I~~L~~kLkE 147 (147)
T 2b9c_A 71 ADRKYEEVARKLVIIESDLERAEE-RAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVARLKKLVGE 147 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTSCCCCC-
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999 99999999998 777 99999999999999999999999999998875
No 88
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.16 E-value=3e-11 Score=137.14 Aligned_cols=106 Identities=23% Similarity=0.437 Sum_probs=83.1
Q ss_pred CCCEEEEEEEEeeCCCC---CCCCCCCCCCEEEEEEeCCC-ceeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEE
Q psy1415 312 KENVLVVTVIKCRDLFI---KDTPSGSSDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVV 387 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~---~d~~~~~sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V 387 (622)
..+.|.|.|++|++|+. +| .+|.+||||+|++.+.. .++||+++++++||+|||+|.|. +.... ...
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D-~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~-v~~~~--~~~----- 86 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGD-MLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFI-LDPNQ--ENV----- 86 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHH-HHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEE-ECTTS--CCB-----
T ss_pred CccEEEEEEEEEECCCCccccC-CCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEE-ecCCC--CCE-----
Confidence 46789999999999998 77 68899999999995432 48999999999999999999997 33211 223
Q ss_pred EeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccccCCceeeEEEEeec
Q psy1415 388 FSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFETYGSTLHFVVFSFD 443 (622)
Q Consensus 388 ~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~l~ 443 (622)
|.|+|||+|.++ +++||++.++|.++.... .+..|+.+.
T Consensus 87 --------------L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~--~~~~w~~L~ 125 (749)
T 1cjy_A 87 --------------LEITLMDANYVM-DETLGTATFTVSSMKVGE--KKEVPFIFN 125 (749)
T ss_dssp --------------CEEEEEECCSSS-CEEEEEECCBSTTSCTTC--CCCEEEEET
T ss_pred --------------EEEEEEECCCCC-CceeEEEEEEHHHcCCCC--ceEEEEecC
Confidence 445555999988 999999999999996333 334556664
No 89
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.05 E-value=1.4e-11 Score=135.00 Aligned_cols=99 Identities=21% Similarity=0.279 Sum_probs=13.8
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCC---CCCeeecEEEEEecCCCCCccEEEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRT---LNPVYNESFVFEVPADNLDSVSLELLLL 575 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~t---lnP~wne~f~f~v~~~~l~~~~L~i~V~ 575 (622)
.+.|+|.|++|++|+++| ||||++++. +. .+.||++++++ +||.|||.|.|.+... . ..|.|+||
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~--~~--~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~--~~L~v~V~ 77 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLD--DM--LYARTTSKPRSASGDTVFWGEHFEFNNLPA-V--RALRLHLY 77 (483)
T ss_dssp EECC------------------------------------------------------CCEECC----------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEEC--Ce--EEeeeeEEeCCCCCCCCccccEEEEecCCC-c--cEEEEEEE
Confidence 467999999999999887 999999983 32 24589999999 9999999999996432 2 35999999
Q ss_pred E-cC---CCCCCceeEEEEECCCCCC-Ccccchhhhhhc
Q psy1415 576 D-WD---RVTKNEVIGRLDLGGDKSS-GTALTHWTDVCN 609 (622)
Q Consensus 576 D-~d---~~~~d~~LG~v~i~L~~~~-~~~~~~W~~L~~ 609 (622)
| ++ +.++|++||++.|++..+. +....+||+|.+
T Consensus 78 d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 78 RDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------------------------CCEECC----
T ss_pred ecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 9 45 3678999999999998655 367789999964
No 90
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.84 E-value=5e-09 Score=120.17 Aligned_cols=104 Identities=21% Similarity=0.309 Sum_probs=81.4
Q ss_pred cEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCe--EeeEeeeeeccC-CCCCeeecE-EEEE-ecCCCCCccEEEEEE
Q psy1415 500 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQ--RVAKKKTHVKKR-TLNPVYNES-FVFE-VPADNLDSVSLELLL 574 (622)
Q Consensus 500 g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~--~~~~~kT~~~~~-tlnP~wne~-f~f~-v~~~~l~~~~L~i~V 574 (622)
+.|+|.|++|++|+.. .+||||++.+.+... ...++||+++++ ++||+|||. |.|. |..+++. .|.|.|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela--~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLA--VVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGC--EEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCcc--EEEEEE
Confidence 6799999999999853 589999999965221 124678999986 599999997 9998 7766554 599999
Q ss_pred EEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCce
Q psy1415 575 LDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQI 615 (622)
Q Consensus 575 ~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i 615 (622)
||++ +++||++.|+|+.+ .+++. +..|.+.-|..+
T Consensus 724 ~D~d----ddfiG~~~ipL~~L-~~GyR-~vpL~~~~g~~~ 758 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGI-KPGYR-HVPLRNESNRPL 758 (816)
T ss_dssp EETT----SCEEEEEEEESTTC-CCEEE-EEEEECTTSCEE
T ss_pred EecC----CCeeeEEEEEHHHc-CCcce-EEEEeCCCCCCC
Confidence 9985 78999999999644 44543 577877777665
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.82 E-value=5.5e-09 Score=120.40 Aligned_cols=106 Identities=21% Similarity=0.331 Sum_probs=81.6
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCC-eEeeEeeee-eccC-CCCCeeec-EEEE-EecCCCCCccEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG-QRVAKKKTH-VKKR-TLNPVYNE-SFVF-EVPADNLDSVSLELL 573 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~-~~~~~~kT~-~~~~-tlnP~wne-~f~f-~v~~~~l~~~~L~i~ 573 (622)
.+.|.|.|++|++|+. +.+||||++.+.+.. ....++||+ ++++ ++||+||| .|.| .|..+++. .|.|.
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~--~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELA--SLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGC--EEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCcc--EEEEE
Confidence 4689999999999985 468999999996522 111256898 7765 69999999 6999 88766655 59999
Q ss_pred EEEcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCcee
Q psy1415 574 LLDWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQIA 616 (622)
Q Consensus 574 V~D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i~ 616 (622)
|||++ +++||++.|+|..+ .+++ +|.+|.+.-|..+.
T Consensus 751 V~D~d----~d~iG~~~ipl~~L-~~G~-r~v~L~~~~g~~~~ 787 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINAL-NSGY-HHLCLHSESNMPLT 787 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGB-CCEE-EEEEEECTTCCEEE
T ss_pred EEEeC----CCccceEeeehhhc-CCCc-EEEeccCCCCCCCC
Confidence 99986 88999999999654 3443 47788777666543
No 92
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.80 E-value=8.4e-10 Score=120.87 Aligned_cols=90 Identities=9% Similarity=-0.033 Sum_probs=8.9
Q ss_pred ccccccceeccccCCcccCCCCCCCCCccceeeecCCCCCCCccccccCCC---CCCCCCCCCCCCCCCCCCcccCCCeE
Q psy1415 169 EAKKLALSQMTLKRPTAVRSPAAAGPNSHYLKKSPSPTYATPVASLVNSPT---GSTNSNNGAGSNSHSPIQPCVALPGT 245 (622)
Q Consensus 169 ~~~~l~~~~~~~~~~~a~~~~~~~dp~~~~vk~~~~p~~~~~~kT~v~~~t---~nP~~~E~~~f~~~~~~~~~~~~L~~ 245 (622)
....|.++|+.|+++++++ || ||++.+ .+....||+++++| +||+|||+|.|..... ...|.|
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dp---Yv~v~l--~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~----~~~L~v 74 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RY---YCELCL--DDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA----VRALRL 74 (483)
T ss_dssp EEECC-------------------------------------------------------CCEECC--------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CC---eEEEEE--CCeEEeeeeEEeCCCCCCCCccccEEEEecCCC----ccEEEE
Confidence 4567778888888888774 88 999998 34456799999999 9999999999986543 378999
Q ss_pred EEEec-c---ccCCCcceeeeccCCCCCCCC
Q psy1415 246 VVITE-N---EKAAPLVLGVAGPTTAGNGPA 272 (622)
Q Consensus 246 ~V~d~-d---~~~~dd~lG~~~~~l~~l~~~ 272 (622)
.|||. | +.++|++||++.+++.++..+
T Consensus 75 ~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 75 HLYRDSDKKRKKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp -------------------------------
T ss_pred EEEecCCccccCCCCceEEEEEEEHHHhcCC
Confidence 99995 4 478999999999999998654
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.79 E-value=8.5e-09 Score=118.93 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=80.1
Q ss_pred cEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCC-eEeeEeeeeeccC-CCCCeeec-EEEEE-ecCCCCCccEEEEEEE
Q psy1415 500 NRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKG-QRVAKKKTHVKKR-TLNPVYNE-SFVFE-VPADNLDSVSLELLLL 575 (622)
Q Consensus 500 g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~-~~~~~~kT~~~~~-tlnP~wne-~f~f~-v~~~~l~~~~L~i~V~ 575 (622)
..|+|.|++|++|+.. .+||||+|.+.+.. ....++||+++.+ ++||+||| .|.|. |..+++. .|.|.||
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela--~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLA--SLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGC--EEEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcC--EEEEEEE
Confidence 4799999999999853 58999999996521 1112468999986 59999999 69998 7655554 5999999
Q ss_pred EcCCCCCCceeEEEEECCCCCCCcccchhhhhhcCCCCce
Q psy1415 576 DWDRVTKNEVIGRLDLGGDKSSGTALTHWTDVCNSPRRQI 615 (622)
Q Consensus 576 D~d~~~~d~~LG~v~i~L~~~~~~~~~~W~~L~~~p~~~i 615 (622)
|++ +++||++.|+|..+ .+++. +..|.+.-|..+
T Consensus 799 D~d----ddfiG~~~lpL~~L-~~GyR-~vpL~~~~g~~l 832 (885)
T 3ohm_B 799 EEG----GKFVGHRILPVSAI-RSGYH-YVCLRNEANQPL 832 (885)
T ss_dssp ETT----TEEEEEEEEETTTC-CCEEE-EEEEECTTSCEE
T ss_pred cCC----ccEEeeEEEEHHHc-CCCce-EEEecCCCCCcc
Confidence 987 88999999999654 45554 467777777653
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.67 E-value=1.2e-07 Score=109.29 Aligned_cols=85 Identities=25% Similarity=0.390 Sum_probs=65.7
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCC--C--ceeEeeeecC-CCCCeeec-eeEEcccCcccCCCcEEEEEEE
Q psy1415 315 VLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPD--K--QKVKTRVLRK-TRNPIYNE-EFTFTGITPHQLKGSTLHFVVF 388 (622)
Q Consensus 315 ~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~--~--~~~kT~vi~~-t~nP~W~e-~f~f~~~~~~~l~~~~L~~~V~ 388 (622)
.|.|.|++|++|+.. .+||||+|.+.+. + .++||+++++ ++||+||| +|.|..+...++ ..|+|.||
T Consensus 726 ~L~V~Visaq~L~~~-----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel--a~Lrf~V~ 798 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR-----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL--ASLRIAAF 798 (885)
T ss_dssp EEEEEEEEEESCCSS-----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG--CEEEEEEE
T ss_pred EEEEEEEEeccCccc-----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc--CEEEEEEE
Confidence 689999999999743 4899999998641 2 2579999976 59999999 699962333333 24666666
Q ss_pred eeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 389 SFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 389 d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|++ +++||++.++|..|.
T Consensus 799 -------------------D~d----ddfiG~~~lpL~~L~ 816 (885)
T 3ohm_B 799 -------------------EEG----GKFVGHRILPVSAIR 816 (885)
T ss_dssp -------------------ETT----TEEEEEEEEETTTCC
T ss_pred -------------------cCC----ccEEeeEEEEHHHcC
Confidence 875 799999999999986
No 95
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.67 E-value=1.3e-07 Score=108.57 Aligned_cols=86 Identities=21% Similarity=0.411 Sum_probs=66.7
Q ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCC---C--ceeEeeeecC-CCCCeeece-eEEcccCcccCCCcEEEEE
Q psy1415 314 NVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPD---K--QKVKTRVLRK-TRNPIYNEE-FTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 314 ~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~---~--~~~kT~vi~~-t~nP~W~e~-f~f~~~~~~~l~~~~L~~~ 386 (622)
+.|.|.|++|++|+.+ .+||||+|.+.+. . +++||+++++ ++||+|||+ |.|..+...++ ..|+|.
T Consensus 650 ~~L~V~Visaq~L~~~-----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel--a~Lrf~ 722 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK-----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL--AVVRII 722 (816)
T ss_dssp EEEEEEEEEEECCCSS-----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG--CEEEEE
T ss_pred eEEEEEEEEcccCCCC-----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc--cEEEEE
Confidence 5789999999999743 4899999998642 1 3679999986 599999998 99962333333 356666
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|| |++ +++||++.++|+.|.
T Consensus 723 V~-------------------D~d----ddfiG~~~ipL~~L~ 742 (816)
T 3qr0_A 723 VS-------------------EEN----GKFIGHRVMPLDGIK 742 (816)
T ss_dssp EE-------------------ETT----SCEEEEEEEESTTCC
T ss_pred EE-------------------ecC----CCeeeEEEEEHHHcC
Confidence 66 764 799999999999987
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.67 E-value=7.4e-08 Score=111.03 Aligned_cols=86 Identities=24% Similarity=0.397 Sum_probs=67.0
Q ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCC--C--ceeEee-eec-CCCCCeeec-eeEE-cccCcccCCCcEEE
Q psy1415 313 ENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPD--K--QKVKTR-VLR-KTRNPIYNE-EFTF-TGITPHQLKGSTLH 384 (622)
Q Consensus 313 ~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~--~--~~~kT~-vi~-~t~nP~W~e-~f~f-~~~~~~~l~~~~L~ 384 (622)
.+.|.|.|++|++|+. +.+||||+|.+.+. + +++||+ +++ +++||+||| +|.| . +...++. .|+
T Consensus 677 ~~~L~V~Visa~~L~~-----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~-v~~~el~--~Lr 748 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE-----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEK-ILMPELA--SLR 748 (799)
T ss_dssp CEEEEEEEEEEESCCS-----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEE-ESSGGGC--EEE
T ss_pred eeeEEEEEEeccccCc-----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEE-EccCCcc--EEE
Confidence 3578999999999974 35899999998631 2 268999 886 469999999 6999 6 4444443 566
Q ss_pred EEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 385 FVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 385 ~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|.|| |++ +++||++.++|+.|.
T Consensus 749 ~~V~-------------------D~d----~d~iG~~~ipl~~L~ 770 (799)
T 2zkm_X 749 VAVM-------------------EEG----NKFLGHRIIPINALN 770 (799)
T ss_dssp EEEE-------------------ETT----TEEEEEEEEEGGGBC
T ss_pred EEEE-------------------EeC----CCccceEeeehhhcC
Confidence 6666 875 799999999999986
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.98 E-value=4.3e-05 Score=66.25 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=69.9
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeee-eeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKT-HVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDW 577 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT-~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~ 577 (622)
...|+|...++.--+-+......||||.+.+...- ...+.+| ..+++|..|.||+.|.-.|.. ...|.|.||+.
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~-~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~----Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEAL-STERGKTLVQKKPTMYPEWKSTFDAHIYE----GRVIQIVLMRA 79 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEE-EETTEEEEECCSCCBCCCTTCEEEEECCT----TCEEEEEEEEE
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeE-EcccceeecccCCCCCcCccceEEeeeeC----CEEEEEEEEcC
Confidence 35678887666532222333468999999984311 0112354 777889999999999988763 45699999964
Q ss_pred CCCCCCceeEEEEECCCCCC------CcccchhhhhhcC
Q psy1415 578 DRVTKNEVIGRLDLGGDKSS------GTALTHWTDVCNS 610 (622)
Q Consensus 578 d~~~~d~~LG~v~i~L~~~~------~~~~~~W~~L~~~ 610 (622)
.. +|++.+.|++.++. +...+.|.+|...
T Consensus 80 a~----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~ 114 (126)
T 1yrk_A 80 AE----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ 114 (126)
T ss_dssp TT----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS
T ss_pred CC----CeeeEEEEEHHHHHhhhccCCCceEEEEecccC
Confidence 43 89999999997543 2344668777654
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.85 E-value=9.3e-05 Score=65.04 Aligned_cols=103 Identities=11% Similarity=0.117 Sum_probs=70.7
Q ss_pred ccEEEEEEEeecCCCCCC-CCCCCCcEEEEEEEeCCeEeeEeee-eeccCCCCCeeecEEEEEecCCCCCccEEEEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKMD-VTGLADPYVKVYLLYKGQRVAKKKT-HVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLD 576 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d-~~g~sDPyV~v~l~~~~~~~~~~kT-~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D 576 (622)
.+.|+|.+.++.--+-+. .....||||.+.+... ....+.+| ..+++|..|.||+.|.-.|.. ...|.|.||+
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~-~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~----Gr~l~i~Vfh 83 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEY-VESENGQMYIQKKPTMYPPWDSTFDAHINK----GRVMQIIVKG 83 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEE-EEETTEEEEEEEEEEECCCSSSEEEECCCS----SCEEEEEEEC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeee-eeccCceeecccCCCCCccccceEeeeEEC----CeEEEEEEEc
Confidence 456888887766544332 2346899999998432 11113566 667789999999999888763 4569999995
Q ss_pred cCCCCCCceeEEEEECCCCCC------CcccchhhhhhcC
Q psy1415 577 WDRVTKNEVIGRLDLGGDKSS------GTALTHWTDVCNS 610 (622)
Q Consensus 577 ~d~~~~d~~LG~v~i~L~~~~------~~~~~~W~~L~~~ 610 (622)
... +|++.+.|++.++. +...+.|.+|...
T Consensus 84 ~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~ 119 (138)
T 2enj_A 84 KNV----DLISETTVELYSLAERCRKNNGKTEIWLELKPQ 119 (138)
T ss_dssp SSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS
T ss_pred CCC----CeeeEEEEEHHHHHhhhccCCCceEEEEecccC
Confidence 432 89999999997544 2344668777654
No 99
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.83 E-value=0.00015 Score=62.95 Aligned_cols=83 Identities=17% Similarity=0.254 Sum_probs=55.8
Q ss_pred CEEEEEEEEee--CCCCCCCCCCCCCCEEEEEEeCCCc----eeEe-eeecCCCCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 314 NVLVVTVIKCR--DLFIKDTPSGSSDPYVKVHLLPDKQ----KVKT-RVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 314 ~~L~V~vi~a~--~L~~~d~~~~~sDPyv~v~l~~~~~----~~kT-~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
.-|+|.+.+.. .|+. .....||||.|.+ +.. ..+| ...++|..|+||+.|.-.+.. ...|.|.
T Consensus 6 ~flRi~~~~~~~~~~~~---~~~~lDPy~aV~v--dE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-----Gr~l~i~ 75 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA---EDEANQPFCAVKM--KEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-----GRVIQIV 75 (126)
T ss_dssp CEEEEEEEEEECSSCCC---SSSSCCCEEEEEE--EEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-----TCEEEEE
T ss_pred ccEEeeeccccccccCC---ccccCCceEEEEe--eeeEEcccceeecccCCCCCcCccceEEeeeeC-----CEEEEEE
Confidence 34555553333 3332 2346899999998 332 2355 677899999999999876222 3456666
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+ +... ++++.+.+.+.+|.
T Consensus 76 Vf-------------------h~a~----~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 76 LM-------------------RAAE----EPVSEVTVGVSVLA 95 (126)
T ss_dssp EE-------------------EETT----EEEEEEEEEHHHHH
T ss_pred EE-------------------cCCC----CeeeEEEEEHHHHH
Confidence 66 4222 99999999999997
No 100
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=97.80 E-value=7.3e-06 Score=60.01 Aligned_cols=24 Identities=33% Similarity=0.331 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccc
Q psy1415 114 ARAEFAEKTVKKLQKEVDRLEVSG 137 (622)
Q Consensus 114 ~rae~ae~~~~~l~~~~~~le~~~ 137 (622)
+|||||||+|++||++||+|||+-
T Consensus 5 ~~aefAERsV~KLek~ID~LEdeL 28 (52)
T 2z5i_A 5 SKNYHLENEVARLKKLVDDLEDEL 28 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999864
No 101
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.78 E-value=0.00017 Score=63.31 Aligned_cols=66 Identities=18% Similarity=0.279 Sum_probs=49.4
Q ss_pred CCCCCEEEEEEeCCCc----eeEe-eeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEe
Q psy1415 334 GSSDPYVKVHLLPDKQ----KVKT-RVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFS 408 (622)
Q Consensus 334 ~~sDPyv~v~l~~~~~----~~kT-~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d 408 (622)
...||||.|.+ +.. ..+| ...++|..|+||+.|.-.+.. ...|.|.|+ +
T Consensus 30 ~~lDPY~aV~V--dE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-----Gr~l~i~Vf-------------------h 83 (138)
T 2enj_A 30 EAVNPYCAVLV--KEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-----GRVMQIIVK-------------------G 83 (138)
T ss_dssp CCCCCEEEEEE--EEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-----SCEEEEEEE-------------------C
T ss_pred ccCCceEEEEe--eeeeeccCceeecccCCCCCccccceEeeeEEC-----CeEEEEEEE-------------------c
Confidence 46899999998 332 3677 677889999999999876222 345666666 3
Q ss_pred ccCCCCcceeeEEEEeCCccc
Q psy1415 409 FDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 409 ~d~~~~d~~iG~~~i~l~~l~ 429 (622)
+.. +|+..+.+.+.+|.
T Consensus 84 -~a~---~fVAn~tV~~edL~ 100 (138)
T 2enj_A 84 -KNV---DLISETTVELYSLA 100 (138)
T ss_dssp -SSC---SCCEEEEEESHHHH
T ss_pred -CCC---CeeeEEEEEHHHHH
Confidence 222 99999999999997
No 102
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=97.75 E-value=3.6e-06 Score=76.01 Aligned_cols=85 Identities=21% Similarity=0.304 Sum_probs=60.6
Q ss_pred ccceeccccccCCccccccccccCCChh---------------------------hhh-cCCCCCccCcccchhhHHHHH
Q psy1415 49 AKKLALSQMTLKRPTAVRSPAAAGPNSH---------------------------YLK-KSPSPTYATPVANQRVEEYKR 100 (622)
Q Consensus 49 ~~kl~~~e~~l~r~e~~r~~~~e~~~~~---------------------------~l~-~lk~~~~~~~~~~~~e~~~~~ 100 (622)
.|||+++|.+|+|+++ |+..+..+..+ .|. +||.....++.+..+.+.-..
T Consensus 2 ~Rri~llEeeLer~ee-rl~~a~~kLeeaek~adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~R 80 (147)
T 2b9c_A 2 NRRIQLVEEELDRAQE-RLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVAR 80 (147)
T ss_dssp ---------CCGGGGT-TTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5899999999999999 98887322221 111 666666667788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 101 QIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 101 ~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
++.+++..|..||.||+.||.++..|+.+++.+.
T Consensus 81 Kl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~ 114 (147)
T 2b9c_A 81 KLVIIESDLERAEERAELSEGKCAELEEELKTVT 114 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988653
No 103
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=95.49 E-value=5.9e-05 Score=68.89 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=42.3
Q ss_pred hhhHHHHHHHHHHHHHH-----HHHHHHHH-------HHHHHHHHHHHhhhhhcccc
Q psy1415 93 QRVEEYKRQIKQLAVKL-----KEAEARAE-------FAEKTVKKLQKEVDRLEVSG 137 (622)
Q Consensus 93 ~~e~~~~~~i~~l~~~l-----keae~rae-------~ae~~~~~l~~~~~~le~~~ 137 (622)
.++.+|+.+++.++.+| ++|++||| +||++|++||+++|+|||+.
T Consensus 95 ~~~~syek~lk~vsfrLGs~~Lk~a~~paE~ireli~~AertV~kLqkeiD~LEDeL 151 (175)
T 3mud_A 95 SCYFFFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTTAKNEKSIDDLEEKV 151 (175)
T ss_dssp TCEEEEEEECSSCEEEEEEEECEECSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999 99999999 99999999999999999975
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=92.99 E-value=0.39 Score=55.88 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=69.4
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeE-eeeeeccCCCCCeeecEEEEEecCCCCC-ccEEEEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAK-KKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLD 576 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~-~kT~~~~~tlnP~wne~f~f~v~~~~l~-~~~L~i~V~D 576 (622)
...+.|.|..+.++... ..++-||.+.+..++..... ..|..+....+|.|||.+.|++.-.++. +..|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46799999999998654 34678999998877766542 3344444577899999999998877654 5679999999
Q ss_pred cCCC--C----------CCceeEEEEECCCCCC
Q psy1415 577 WDRV--T----------KNEVIGRLDLGGDKSS 597 (622)
Q Consensus 577 ~d~~--~----------~d~~LG~v~i~L~~~~ 597 (622)
.... + .+..||.+.++|.+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 6331 1 2459999999998644
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=92.62 E-value=0.49 Score=55.21 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=69.2
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCC-ccEEEEEEEEc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLDW 577 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~-~~~L~i~V~D~ 577 (622)
...++|.|..+...... .+..++-||.+.+..++......+|..+.-+.+|.|||.+.|++.-.++. +..|.|+||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 34678888887642111 12356789999888888877766676666667899999999998877654 56799999985
Q ss_pred CCC----------------CCCceeEEEEECCCCCC
Q psy1415 578 DRV----------------TKNEVIGRLDLGGDKSS 597 (622)
Q Consensus 578 d~~----------------~~d~~LG~v~i~L~~~~ 597 (622)
... ++...||.+.++|.+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 422 13458999999998544
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=92.36 E-value=0.38 Score=56.49 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=69.0
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCCCC-ccEEEEEEEEc
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLDW 577 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~-~~~L~i~V~D~ 577 (622)
...++|.|..+.++.... ....+-||.+.+..+++......+.......+|.|||.+.|++.-.++. ...|.|+||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 467999999999886432 3456789999998776655433333333456888999999999776654 56699999986
Q ss_pred CCC----CCCceeEEEEECCCCCC
Q psy1415 578 DRV----TKNEVIGRLDLGGDKSS 597 (622)
Q Consensus 578 d~~----~~d~~LG~v~i~L~~~~ 597 (622)
... .....||.+.++|.+-.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 542 13458999999998544
No 107
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=89.97 E-value=0.014 Score=49.11 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=57.9
Q ss_pred ccceeccccccCCccccccccccCCChh-hhh------cCCCCCccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 49 AKKLALSQMTLKRPTAVRSPAAAGPNSH-YLK------KSPSPTYATPVANQRVEEYKRQIKQLAVKLKEAEARAEFAEK 121 (622)
Q Consensus 49 ~~kl~~~e~~l~r~e~~r~~~~e~~~~~-~l~------~lk~~~~~~~~~~~~e~~~~~~i~~l~~~lkeae~rae~ae~ 121 (622)
-+|+..+..+.+.|.+ |++.++.+..+ +-+ .+.||.-.-.....--|.|++.+.....+|.+++.++..||+
T Consensus 8 KkKm~~lk~e~e~a~d-rae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ 86 (101)
T 3u1c_A 8 KKKMQMLKLDKENALD-RAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAES 86 (101)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777888888888 88877654444 111 000000000011122356777788888999999999999999
Q ss_pred HHHHHHHhhhhhccc
Q psy1415 122 TVKKLQKEVDRLEVS 136 (622)
Q Consensus 122 ~~~~l~~~~~~le~~ 136 (622)
.|..|.+-|.-||++
T Consensus 87 ev~~L~RriqllEEe 101 (101)
T 3u1c_A 87 EVASLNRRIQLVEEE 101 (101)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHccC
Confidence 999999999988864
No 108
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.40 E-value=4.7 Score=38.38 Aligned_cols=60 Identities=8% Similarity=0.169 Sum_probs=47.5
Q ss_pred eeEeeeeeccCCCCCeeecEEEEEecCCCCCccEEEEEEEEcCCC----CCCceeEEEEECCCC
Q psy1415 536 VAKKKTHVKKRTLNPVYNESFVFEVPADNLDSVSLELLLLDWDRV----TKNEVIGRLDLGGDK 595 (622)
Q Consensus 536 ~~~~kT~~~~~tlnP~wne~f~f~v~~~~l~~~~L~i~V~D~d~~----~~d~~LG~v~i~L~~ 595 (622)
...++|.+.+.+.+|.|+|++.+.++.+...+..|.|+++....- .....+|-+-++|-+
T Consensus 76 ~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 76 ISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp BSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred ceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346688899999999999999999999888888899999875432 223478888888753
No 109
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.12 E-value=4.3 Score=38.62 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=45.7
Q ss_pred eeEeeeecCCCCCeeeceeEEcccCcccCCCcEEEEEEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCC
Q psy1415 350 KVKTRVLRKTRNPIYNEEFTFTGITPHQLKGSTLHFVVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQ 426 (622)
Q Consensus 350 ~~kT~vi~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~ 426 (622)
.++|-|...+.+|.|+|++.+. ++.+...+.-|.|..+++.-..+ ....+..+|-+.++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~-LP~~~~~~~HLlFtFrH~S~~~k---------------~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVA-IPIEDVNRSHLRFTFRHRSSQDS---------------KDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEE-ECTTSSTTEEEEEEEEECCCCSS---------------CCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEe-eChhhcCCeEEEEEEEEeccccc---------------ccccCCeeEEEEEEcc
Confidence 7888899999999999999997 88888888889899884332110 1123457898888874
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=87.49 E-value=0.55 Score=55.37 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=68.4
Q ss_pred ccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEeCCeEeeE-eeeeeccCCCCCeeecEEEEEecCCCCC-ccEEEEEEEE
Q psy1415 499 ANRFTIVVLKARNLPKMDVTGLADPYVKVYLLYKGQRVAK-KKTHVKKRTLNPVYNESFVFEVPADNLD-SVSLELLLLD 576 (622)
Q Consensus 499 ~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~~~~~~~~-~kT~~~~~tlnP~wne~f~f~v~~~~l~-~~~L~i~V~D 576 (622)
...++|.|..+.++... ..++-||.+.+..++..... ..|..+....+|.|||.+.|++.-.++. +..|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999998654 35688999888777766533 3355555567899999999999877755 5679999999
Q ss_pred cCCC----------------------CCCceeEEEEECCCCCC
Q psy1415 577 WDRV----------------------TKNEVIGRLDLGGDKSS 597 (622)
Q Consensus 577 ~d~~----------------------~~d~~LG~v~i~L~~~~ 597 (622)
.... +....||.+.++|.+-.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp C------------------------------CCEEEEESBCTT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 6311 12348999999998544
No 111
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=85.31 E-value=1.5 Score=36.48 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=58.8
Q ss_pred ccceeccccccCCccccccccccCCChh-hhh------cCCCCCccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 49 AKKLALSQMTLKRPTAVRSPAAAGPNSH-YLK------KSPSPTYATPVANQRVEEYKRQIKQLAVKLKEAEARAEFAEK 121 (622)
Q Consensus 49 ~~kl~~~e~~l~r~e~~r~~~~e~~~~~-~l~------~lk~~~~~~~~~~~~e~~~~~~i~~l~~~lkeae~rae~ae~ 121 (622)
-+|+..+..+.+.|.+ |++.++.+..+ +-+ .+.+|.-.-.....--|.|++.+.....+|.+++.++..||+
T Consensus 8 KkKm~~lk~e~e~a~d-~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~ 86 (101)
T 3u59_A 8 KKKMQMLKLDKENAID-RAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEA 86 (101)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777788888 88877655444 111 000000000111223466788888888999999999999999
Q ss_pred HHHHHHHhhhhhccc
Q psy1415 122 TVKKLQKEVDRLEVS 136 (622)
Q Consensus 122 ~~~~l~~~~~~le~~ 136 (622)
.|..|.+-|.-+|++
T Consensus 87 evasLnRriqllEEe 101 (101)
T 3u59_A 87 EVASLNRRIQLVEEE 101 (101)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHccC
Confidence 999999999988864
No 112
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=84.41 E-value=0.16 Score=35.48 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1415 105 LAVKLKEAEARAEFAEKTVKKLQKEVDR 132 (622)
Q Consensus 105 l~~~lkeae~rae~ae~~~~~l~~~~~~ 132 (622)
++..|.||++|||.||+++++|......
T Consensus 4 lQrELeEa~Erae~ae~~vnkLR~k~R~ 31 (45)
T 3zwh_Q 4 LQRELEDATETADAMNREVSSLKNKLRR 31 (45)
T ss_dssp SSSHHHHHTTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4457999999999999999999876543
No 113
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.36 E-value=4.5 Score=47.11 Aligned_cols=107 Identities=13% Similarity=0.226 Sum_probs=64.8
Q ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc----eeEeeeecCCCCCeeeceeEEcccCcccC-CCcEEEE
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ----KVKTRVLRKTRNPIYNEEFTFTGITPHQL-KGSTLHF 385 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~----~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-~~~~L~~ 385 (622)
.-...+.|.|..+.++... ..++-||.+.+..|++ ...|..+....+|.|||.+.|. +...+| .+..|.|
T Consensus 214 ~~~~~f~i~i~~~~~~~~~----~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~-i~i~dLPr~a~L~~ 288 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNAD----ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFD-ISVCDLPRMARLCF 288 (940)
T ss_dssp TCCSEEEEEEEEEECCCC-------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEE-EEGGGCCTTCEEEE
T ss_pred hcCCceEEEEEEecccCCC----CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcc-cccccCCcccEEEE
Confidence 3457899999999999654 2467899988876765 3455555557789999999997 555554 4567888
Q ss_pred EEEeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 386 VVFSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 386 ~V~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
+||+-.....+.. ..+ + ..-..+..||++.++|=+-.
T Consensus 289 ti~~~~~~~~~~~--~~~----~-~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 289 ALYAVVEKAKKAR--STK----K-KSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEEEEC-----------------------CEEEEEEEEESBCTT
T ss_pred EEEEecCCccCcc--ccc----c-ccccccceEEEEeeeEECCc
Confidence 8883221000000 000 0 00113458999999886543
No 114
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=82.32 E-value=11 Score=44.35 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=63.4
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc----eeEeeeecCCCCCeeeceeEEcccCcccC-CCcEEEEE
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ----KVKTRVLRKTRNPIYNEEFTFTGITPHQL-KGSTLHFV 386 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~----~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-~~~~L~~~ 386 (622)
-...+.|.|+.+.++.... ....+-||.+.+..|++ ..+|..+ ...+|.|||...|. +...+| ....|.|+
T Consensus 353 ~~~~f~v~i~~~~~~n~~~--~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~-i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI--RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYD-IYIPDLPRAARLCLS 428 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC--SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEE-EEGGGCCTTCEEEEE
T ss_pred CCCCEEEEEEEecCCCCCc--cccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEec-CccccCChhcEEEEE
Confidence 4578999999999886432 34568899999887776 3344433 35678899999997 555554 34567777
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCC----CCcceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRY----SRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~----~~d~~iG~~~i~l~~l~ 429 (622)
|| +.... ..+..||.+.++|=+..
T Consensus 429 l~-------------------~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 429 IC-------------------SVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp EC-------------------CCCCCC-------CCEEEEEESBCTT
T ss_pred EE-------------------EecCccCcccccceeEEeeeeeEccC
Confidence 77 32221 23568999999986553
No 115
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=81.77 E-value=0.076 Score=35.90 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=24.1
Q ss_pred cccceEeeehhhHHHHHhhheeeeeeeeccC
Q psy1415 14 VSGHTVLGLGLAGLVFVATVCLATCYCRRRS 44 (622)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 44 (622)
.++-+++|++++.++-++-++...|+++|||
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 4567889999988877777777778877765
No 116
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=80.49 E-value=11 Score=43.94 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc---eeEeeeecCCCCCeeeceeEEcccCcccC-CCcEEEEEE
Q psy1415 312 KENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ---KVKTRVLRKTRNPIYNEEFTFTGITPHQL-KGSTLHFVV 387 (622)
Q Consensus 312 ~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~---~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-~~~~L~~~V 387 (622)
-...+.|.|+.+....... +..++-||.+.+..|++ ..+|..+.-+.+|.|||.+.|. +...+| .+..|.|+|
T Consensus 216 ~~~~f~i~i~~~~~~~~~~--~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~-i~i~dLPr~a~L~~ti 292 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLPR--TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFS-IKIKDLPKGALLNLQI 292 (961)
T ss_dssp CCSEEEEEEEEEECSSCCT--TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEE-EEGGGCCTTCEEEEEE
T ss_pred ccCceEEEEeecccccccC--CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEec-cccccCCcccEEEEEE
Confidence 3467888888887532221 33467899988776776 3345544556679999999996 555554 456788888
Q ss_pred EeeccCCCCCCCcceEEEEEeccCCCCcceeeEEEEeCCccc
Q psy1415 388 FSFDRYSRDDIGSTLHFVVFSFDRYSRDDIVGEVFYSLQSFE 429 (622)
Q Consensus 388 ~d~d~~~~~d~~~~l~i~v~d~d~~~~d~~iG~~~i~l~~l~ 429 (622)
|+-....... ..+ .+.=+.+.-+++..||.+.++|=+..
T Consensus 293 ~~~~~~~~~~-~~~--~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 293 YCGAKPALSG-KTS--AEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EEEEC-----------------------CEEEEEEEESBCTT
T ss_pred EecccCcccc-ccc--cccccccccccceeEEEEeeeeecCC
Confidence 8432211000 000 00000011224568999999886554
No 117
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=75.57 E-value=4.3 Score=32.20 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy1415 99 KRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEV 135 (622)
Q Consensus 99 ~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~ 135 (622)
.++...++.+++++|.+++.+|..+..|++-+.-+|+
T Consensus 19 ~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~ 55 (81)
T 1ic2_A 19 LDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTED 55 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3334444444555555554444444444444444433
No 118
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=71.72 E-value=0.56 Score=37.46 Aligned_cols=71 Identities=11% Similarity=0.155 Sum_probs=39.7
Q ss_pred ccceeccccccCCccccccccccCCChh-hhhcCCCCCccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 49 AKKLALSQMTLKRPTAVRSPAAAGPNSH-YLKKSPSPTYATPVANQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQ 127 (622)
Q Consensus 49 ~~kl~~~e~~l~r~e~~r~~~~e~~~~~-~l~~lk~~~~~~~~~~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~ 127 (622)
-.|+..++.+++.|.+ |++.++.+..+ +-+ .+++.+-.......|..|++.|..+++|...|......-+
T Consensus 5 kkKm~~lk~e~d~a~~-~~~~~e~~l~~~e~~--------~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeeae 75 (81)
T 1ic2_A 5 KKKMQMLKLDKENALD-RAEQAEADKKAAEER--------SKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELAD 75 (81)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888888888 88876633222 111 1222233344455566666666666666666555444443
Q ss_pred H
Q psy1415 128 K 128 (622)
Q Consensus 128 ~ 128 (622)
+
T Consensus 76 k 76 (81)
T 1ic2_A 76 K 76 (81)
T ss_dssp G
T ss_pred H
Confidence 3
No 119
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=71.65 E-value=0.38 Score=33.54 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=25.5
Q ss_pred cccceEeeehhhHHHHHhhheeeeeeeeccCC
Q psy1415 14 VSGHTVLGLGLAGLVFVATVCLATCYCRRRSS 45 (622)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 45 (622)
-.+|+|+|-+++++++++.+++..++.-||+.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 34688999999999998888877777777665
No 120
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=71.32 E-value=5.8 Score=32.90 Aligned_cols=43 Identities=26% Similarity=0.236 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q psy1415 95 VEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVSG 137 (622)
Q Consensus 95 e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~~ 137 (622)
-|.+.+...++..++|++|.+++.+|..+..|++-+.-+|++-
T Consensus 18 ~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~el 60 (101)
T 3u1c_A 18 KENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSR 60 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3556667778888888888888888888888888887776653
No 121
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=69.12 E-value=11 Score=29.55 Aligned_cols=44 Identities=34% Similarity=0.516 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cceee
Q psy1415 99 KRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVSG-HTVLG 142 (622)
Q Consensus 99 ~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~~-~~~~g 142 (622)
......+..+|+++|.|-+.-+..+.+|++++..|.... .+++|
T Consensus 37 r~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~~~~~~~~ 81 (81)
T 1wt6_A 37 RTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAEGATAVTG 81 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhccC
Confidence 344555668999999999999999999999999976554 44444
No 122
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=69.04 E-value=7.3 Score=34.94 Aligned_cols=42 Identities=24% Similarity=0.319 Sum_probs=33.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 92 NQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 92 ~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
...+.+|++-.+ ++..|..||.|++.||.++..|+.+++.+.
T Consensus 14 e~ad~KyeEvaR-~E~dLEraEERae~aE~k~~eLEeeL~~v~ 55 (155)
T 2efr_A 14 SKNYHLENEVAR-LKKLLERAEERAELSEGKSAELEEELKTVT 55 (155)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455665555 999999999999999999999999887653
No 123
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=67.46 E-value=0.31 Score=33.89 Aligned_cols=30 Identities=23% Similarity=0.223 Sum_probs=23.6
Q ss_pred cceEeeehhhHHHHHhhheeeeeeeeccCC
Q psy1415 16 GHTVLGLGLAGLVFVATVCLATCYCRRRSS 45 (622)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 45 (622)
+|+|+|-+++++++++.+++..++.-||+.
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 578888889988888888777777766665
No 124
>1a92_A Delta antigen; leucine zipper, coiled-coil, oligomerization; 1.80A {Hepatitis delta virus} SCOP: h.4.6.1 PDB: 1by0_A
Probab=61.23 E-value=6.5 Score=27.45 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccc
Q psy1415 108 KLKEAEARAEFAEKTVKKLQKEVDRLEVSGHT 139 (622)
Q Consensus 108 ~lkeae~rae~ae~~~~~l~~~~~~le~~~~~ 139 (622)
+--++..++|..|+...+..+.|..|||+.|=
T Consensus 8 qWv~~Rkk~eeler~lrk~kk~iKklEdeNPW 39 (50)
T 1a92_A 8 QWVSGRKKLEELERDLRKLKKKIKKLEEDNPW 39 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Confidence 34456778889999999999999999999874
No 125
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=60.60 E-value=12 Score=30.81 Aligned_cols=41 Identities=27% Similarity=0.251 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy1415 96 EEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVS 136 (622)
Q Consensus 96 ~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~ 136 (622)
|...+...++..++|.+|.+++.+|..+..|++-+.-+++.
T Consensus 19 e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~e 59 (101)
T 3u59_A 19 ENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDE 59 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 44555666677777777777777777777777766666554
No 126
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=60.35 E-value=1.7 Score=32.66 Aligned_cols=21 Identities=24% Similarity=0.347 Sum_probs=15.4
Q ss_pred hHHHHHhhheeeeee-eeccCC
Q psy1415 25 AGLVFVATVCLATCY-CRRRSS 45 (622)
Q Consensus 25 ~~~~~~~~~~~~~~~-~~~~k~ 45 (622)
+++++++++++-.|. |++|.+
T Consensus 18 ~~lll~~glcI~ccvkcrhRrr 39 (70)
T 2klu_A 18 AGLLLFIGLGIFFSVRSRHRRR 39 (70)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHHHHhhHHHHHHH
Confidence 346678888888887 776655
No 127
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=58.99 E-value=7.5 Score=45.89 Aligned_cols=74 Identities=22% Similarity=0.380 Sum_probs=53.4
Q ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc----eeEeeeecCCCCCeeeceeEEcccCcccC-CCcEEEE
Q psy1415 311 EKENVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ----KVKTRVLRKTRNPIYNEEFTFTGITPHQL-KGSTLHF 385 (622)
Q Consensus 311 ~~~~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~----~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-~~~~L~~ 385 (622)
.-...+.|.|..+.++... ..++-||.+.+..|++ ...|..+....+|.|||.+.|. +...+| .+..|.|
T Consensus 350 ~~~~~f~i~i~~~~~~~~~----~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~-i~~~dLPr~a~L~~ 424 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTE----ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFD-INICDLPRMARLCF 424 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCC----SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEE-EESSSCCTTCEEEE
T ss_pred hcCCCEEEEEEEeccCCCC----CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeC-CccccCChhcEEEE
Confidence 3457899999999998654 2467888887766765 3445555557789999999997 555554 4567888
Q ss_pred EEEe
Q psy1415 386 VVFS 389 (622)
Q Consensus 386 ~V~d 389 (622)
+||+
T Consensus 425 ti~~ 428 (1092)
T 2y3a_A 425 AVYA 428 (1092)
T ss_dssp ECCC
T ss_pred EEEE
Confidence 8884
No 128
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=58.15 E-value=1 Score=30.80 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=13.1
Q ss_pred ceEeeehhhHHHHHhhheeeeee-eecc
Q psy1415 17 HTVLGLGLAGLVFVATVCLATCY-CRRR 43 (622)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 43 (622)
+.++|-+++++++++.+.+..++ |+||
T Consensus 13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 34455555666665533333344 4443
No 129
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=57.65 E-value=20 Score=29.31 Aligned_cols=42 Identities=24% Similarity=0.374 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 93 QRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 93 ~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
.....++.++..|..+|.+...+-..||+...+++.|+++|.
T Consensus 19 ~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 19 RELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557888899999999999999999999999999999874
No 130
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=56.27 E-value=17 Score=32.62 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=61.8
Q ss_pred ccCCccEEEEEEEeecCCCCC-CCCCCCCcEEEEEEEeCCeEeeEeeeeeccCCCCCeeecEEEEEecCCC-----CCcc
Q psy1415 495 WQPAANRFTIVVLKARNLPKM-DVTGLADPYVKVYLLYKGQRVAKKKTHVKKRTLNPVYNESFVFEVPADN-----LDSV 568 (622)
Q Consensus 495 ~~~~~g~L~V~I~~A~~L~~~-d~~g~sDPyV~v~l~~~~~~~~~~kT~~~~~tlnP~wne~f~f~v~~~~-----l~~~ 568 (622)
..+..+.+.++|.++.=-+.. ...|..+|..-+.+.--... .+.|.+. ...+|.||-+-.|.|...+ +.+.
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfE--tq~Tpv~-~G~~p~y~fts~Y~V~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFE--LQTTPVV-RGLHPEYNFTSQYLVHVNDLFLQYIQKN 89 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCC--CEECCCE-ESSSCCCCEEEEEEECCSHHHHHHHHHC
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceE--eeecccc-cCCCCCcceEEEEEEEeCHHHHHHHhcC
Confidence 455677889999887621111 11234578666665221221 3345444 4889999988888886542 2245
Q ss_pred EEEEEEEEcCCCCCCceeEEEEECCCC
Q psy1415 569 SLELLLLDWDRVTKNEVIGRLDLGGDK 595 (622)
Q Consensus 569 ~L~i~V~D~d~~~~d~~LG~v~i~L~~ 595 (622)
.+.|+|+... .+....||.++|+|..
T Consensus 90 ~l~lELhqa~-g~~~~tla~~~I~l~~ 115 (156)
T 2yrb_A 90 TITLEVHQAY-STEYETIAACQLKFHE 115 (156)
T ss_dssp CEEEEEEEEC-SSCEEEEEEEEECCSH
T ss_pred CEEEEEEEee-CCCceEEEEEEEEhHH
Confidence 6889998853 3456689999999984
No 131
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=55.92 E-value=28 Score=27.29 Aligned_cols=50 Identities=20% Similarity=0.231 Sum_probs=34.6
Q ss_pred CCccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1415 84 PTYATPVANQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRL 133 (622)
Q Consensus 84 ~~~~~~~~~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~l 133 (622)
|+...+++++|-...+..-..|+.++..+|.+.+.+..+-..++.|+..+
T Consensus 4 l~~e~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 4 MAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp ------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888888888888888888888888888776666666666654
No 132
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=53.60 E-value=14 Score=24.03 Aligned_cols=32 Identities=31% Similarity=0.437 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1415 101 QIKQLAVKLKEAEARAEFAEKTVKKLQKEVDR 132 (622)
Q Consensus 101 ~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~ 132 (622)
+++||++|.+|-..+...-|..|.+|+..+..
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll~~ 33 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLEKENAE 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 35788888888888888888888888776543
No 133
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=42.81 E-value=17 Score=22.42 Aligned_cols=15 Identities=53% Similarity=0.760 Sum_probs=12.1
Q ss_pred HHHHHHHhhhhhccc
Q psy1415 122 TVKKLQKEVDRLEVS 136 (622)
Q Consensus 122 ~~~~l~~~~~~le~~ 136 (622)
-|++||+.+|+|||.
T Consensus 14 ivq~lq~r~drle~t 28 (32)
T 2akf_A 14 IVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 478888889988874
No 134
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=40.04 E-value=62 Score=28.71 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=54.5
Q ss_pred cCCccEEEEEEEeecCCCCCCCCCCCCcEEEEEEEe-CCeEee-Eeeeeecc--CCCCCeeecEEEEEecCCCCC-ccEE
Q psy1415 496 QPAANRFTIVVLKARNLPKMDVTGLADPYVKVYLLY-KGQRVA-KKKTHVKK--RTLNPVYNESFVFEVPADNLD-SVSL 570 (622)
Q Consensus 496 ~~~~g~L~V~I~~A~~L~~~d~~g~sDPyV~v~l~~-~~~~~~-~~kT~~~~--~tlnP~wne~f~f~v~~~~l~-~~~L 570 (622)
.|+...|+|.|.+. +|. |.....|||+.+++.+ +|.... .+.|.+.. ....-.||...++..+.+.+. +..|
T Consensus 10 ~pg~t~l~v~Ie~i-glk--da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~ai 86 (152)
T 2qzq_A 10 EPGMTLLTLTIEKI-GLK--DAGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAI 86 (152)
T ss_dssp CTTCCEEEEEEEEE-ECT--TGGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEE
T ss_pred CCCCeEEEEEEEEE-EeC--CHHHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEE
Confidence 45556788888776 554 3345689999999975 333332 34455542 222234665555444444332 5568
Q ss_pred EEEEEEcCCCCCC-ceeEEEEECCCCC
Q psy1415 571 ELLLLDWDRVTKN-EVIGRLDLGGDKS 596 (622)
Q Consensus 571 ~i~V~D~d~~~~d-~~LG~v~i~L~~~ 596 (622)
.+++.++....+. ...+-+-+.++++
T Consensus 87 vfElkH~k~kkkk~S~kCw~f~~~d~i 113 (152)
T 2qzq_A 87 FFEFKHYKPKKRFTSTKCFAFMEMDEI 113 (152)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEGGGC
T ss_pred EEEEEEecccceeeeeeeEEEEEhhhc
Confidence 8888887554321 2344455555433
No 135
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=36.21 E-value=2.3e+02 Score=25.18 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=48.1
Q ss_pred CCCEEEEEEeCCC-ceeEeeeecCCCCCeeeceeEEcccCcccC-----CCcEEEEEEEeeccCCCCCCCcceEEEEEec
Q psy1415 336 SDPYVKVHLLPDK-QKVKTRVLRKTRNPIYNEEFTFTGITPHQL-----KGSTLHFVVFSFDRYSRDDIGSTLHFVVFSF 409 (622)
Q Consensus 336 sDPyv~v~l~~~~-~~~kT~vi~~t~nP~W~e~f~f~~~~~~~l-----~~~~L~~~V~d~d~~~~~d~~~~l~i~v~d~ 409 (622)
.+|..-+.+---+ +.+.|.++. ..+|.||-+-.|. +..+++ +...+.+.++ ..
T Consensus 40 ~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~-V~~d~~fl~yL~~~~l~lELh-------------------qa 98 (156)
T 2yrb_A 40 KEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYL-VHVNDLFLQYIQKNTITLEVH-------------------QA 98 (156)
T ss_dssp SCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEE-ECCSHHHHHHHHHCCEEEEEE-------------------EE
T ss_pred cCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEE-EEeCHHHHHHHhcCCEEEEEE-------------------Ee
Confidence 4676555552122 366676666 7899999888886 555442 2334555554 43
Q ss_pred cCCCCcceeeEEEEeCCccccCC
Q psy1415 410 DRYSRDDIVGEVFYSLQSFETYG 432 (622)
Q Consensus 410 d~~~~d~~iG~~~i~l~~l~~~~ 432 (622)
. ......||.++|+|..+..+.
T Consensus 99 ~-g~~~~tla~~~I~l~~lLe~~ 120 (156)
T 2yrb_A 99 Y-STEYETIAACQLKFHEILEKS 120 (156)
T ss_dssp C-SSCEEEEEEEEECCSHHHHCC
T ss_pred e-CCCceEEEEEEEEhHHhhCcC
Confidence 2 235689999999999998443
No 136
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=35.53 E-value=84 Score=24.13 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=26.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1415 90 VANQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDR 132 (622)
Q Consensus 90 ~~~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~ 132 (622)
++++|-...+..-..|+.++..+|.+.|.+...-..++.|+..
T Consensus 4 ~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~ 46 (72)
T 3cve_A 4 NSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKT 46 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555566666667777777777776666555555555544
No 137
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=34.74 E-value=53 Score=29.30 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccccc
Q psy1415 107 VKLKEAEARAEFAEKTVKKLQKEVDRLEVSGHT 139 (622)
Q Consensus 107 ~~lkeae~rae~ae~~~~~l~~~~~~le~~~~~ 139 (622)
.+++.|..++..+|.+++.+|.+++.|.+.+|-
T Consensus 117 nny~~Ads~~~~lekKvn~aq~kLs~L~P~dP~ 149 (201)
T 3u0c_A 117 NKLKNADSKIKDLENKINQIQTRLSELDPESPE 149 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCSSCTT
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 567788999999999999999999999888864
No 138
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=34.36 E-value=2 Score=29.83 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=18.3
Q ss_pred ceEeeehhhHHHHHhhheeeeeeeeccCC
Q psy1415 17 HTVLGLGLAGLVFVATVCLATCYCRRRSS 45 (622)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 45 (622)
|+++|.+++.+++|+..++.+.|-+||+-
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 44777777755555555556677777654
No 139
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=34.01 E-value=56 Score=28.55 Aligned_cols=44 Identities=25% Similarity=0.418 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy1415 93 QRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVS 136 (622)
Q Consensus 93 ~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~ 136 (622)
+.-+.+++++..|..+|.++....+.++....+|+++++.|+..
T Consensus 82 ~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 82 LDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566666777888888888888888777777777776543
No 140
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=31.99 E-value=72 Score=24.88 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=30.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy1415 92 NQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVS 136 (622)
Q Consensus 92 ~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~ 136 (622)
+-+.+..+++|..|+.|+-=.|...|.-...|.+-+++|+.|...
T Consensus 6 ~~~~~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~q 50 (78)
T 3efg_A 6 SPRDQELEARLVELETRLSFQEQALTELSEALADARLTGARNAEL 50 (78)
T ss_dssp --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777777777777777776666677777788777654
No 141
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=31.62 E-value=70 Score=20.82 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy1415 101 QIKQLAVKLKEAEARAEFAEKTVKKLQKE 129 (622)
Q Consensus 101 ~i~~l~~~lkeae~rae~ae~~~~~l~~~ 129 (622)
+++||++|.+|--.+-..-|..|.+|..-
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36778888887777776777777777654
No 142
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=31.51 E-value=99 Score=23.86 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHhhhhhccccc
Q psy1415 96 EEYKRQIKQLAVKLKEAEARAEFAEK-------TVKKLQKEVDRLEVSGH 138 (622)
Q Consensus 96 ~~~~~~i~~l~~~lkeae~rae~ae~-------~~~~l~~~~~~le~~~~ 138 (622)
+..+.++..|.....+|..+++.+|+ +....|.-.+..+.+..
T Consensus 5 ~aiKkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~ 54 (75)
T 3mtu_A 5 DAIKKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQENEGEND 54 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhH
Confidence 44566778888888888999999888 77777777666665543
No 143
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=30.98 E-value=94 Score=23.84 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 99 KRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 99 ~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
.++|++....+++-|.+...-+..+.+|+.++|.+.
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445666677777778888787888888888888763
No 144
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=30.94 E-value=19 Score=23.90 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 96 EEYKRQIKQLAVKLKEAEARAEFAEKT 122 (622)
Q Consensus 96 ~~~~~~i~~l~~~lkeae~rae~ae~~ 122 (622)
+....+|..|..++.+|++|++.+++.
T Consensus 7 ~avKkKiq~lq~q~d~aee~~~~~~~~ 33 (37)
T 3azd_A 7 EAVRRKIRSLQEQNYHLENEVARLKKL 33 (37)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777777777777777665553
No 145
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=28.54 E-value=78 Score=28.13 Aligned_cols=39 Identities=26% Similarity=0.371 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 96 EEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 96 ~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
..+..++..|..+|.++..+-..||....+++.|+++|.
T Consensus 54 ~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLT 92 (154)
T 2ocy_A 54 SDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 92 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888999999998888999999999999999874
No 146
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=28.44 E-value=6.3 Score=30.07 Aligned_cols=12 Identities=25% Similarity=0.692 Sum_probs=8.5
Q ss_pred eeeeeeeeccCC
Q psy1415 34 CLATCYCRRRSS 45 (622)
Q Consensus 34 ~~~~~~~~~~k~ 45 (622)
++.||+||-|-.
T Consensus 30 li~gcwcylrlq 41 (90)
T 1zza_A 30 LILGCWCYLRLQ 41 (90)
T ss_dssp HHHHHHTTTSSC
T ss_pred HHHHHHHHHHHH
Confidence 467899987643
No 147
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=28.29 E-value=78 Score=30.14 Aligned_cols=46 Identities=13% Similarity=0.276 Sum_probs=34.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q psy1415 92 NQRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLEVSG 137 (622)
Q Consensus 92 ~~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le~~~ 137 (622)
+.+.|.-|+.|..|.+++.|-....+.-|..+.+++..+.+|+|..
T Consensus 5 nsRvd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL~d~i 50 (233)
T 2yko_A 5 RSRCDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEIWDYV 50 (233)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4566777888888888888877777777777888888888887654
No 148
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=27.97 E-value=91 Score=19.99 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 101 QIKQLAVKLKEAEARAEFAEKTVKKLQK 128 (622)
Q Consensus 101 ~i~~l~~~lkeae~rae~ae~~~~~l~~ 128 (622)
.+.||++|.++-=.+-..-|..|.+|..
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3677888887776666666666666654
No 149
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=26.32 E-value=1.2e+02 Score=26.79 Aligned_cols=93 Identities=15% Similarity=0.194 Sum_probs=51.1
Q ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEeCCCc-----eeEeeee--cCCCCCeeeceeEEcccCcccCCCcEEEEE
Q psy1415 314 NVLVVTVIKCRDLFIKDTPSGSSDPYVKVHLLPDKQ-----KVKTRVL--RKTRNPIYNEEFTFTGITPHQLKGSTLHFV 386 (622)
Q Consensus 314 ~~L~V~vi~a~~L~~~d~~~~~sDPyv~v~l~~~~~-----~~kT~vi--~~t~nP~W~e~f~f~~~~~~~l~~~~L~~~ 386 (622)
..|.|.|-+- +|... ..-.|||+.|++.+..+ .+.|.+. +....=.|+.++..+ ...+.+...
T Consensus 14 t~l~v~Ie~i-glkda---~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lq-tple~lp~G----- 83 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKDA---GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQ-RHLEKLPKG----- 83 (152)
T ss_dssp CEEEEEEEEE-ECTTG---GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECS-SCGGGSCTT-----
T ss_pred eEEEEEEEEE-EeCCH---HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEee-CcHHHCCCC-----
Confidence 3455555443 66543 44579999999986554 5566654 233334566666665 555555432
Q ss_pred EEeeccCCCCCCCcceEEEEEeccCCCC-cceeeEEEEeCCccc
Q psy1415 387 VFSFDRYSRDDIGSTLHFVVFSFDRYSR-DDIVGEVFYSLQSFE 429 (622)
Q Consensus 387 V~d~d~~~~~d~~~~l~i~v~d~d~~~~-d~~iG~~~i~l~~l~ 429 (622)
..|.+|+-++..-.+ -...+++.+.++++.
T Consensus 84 -------------~aivfElkH~k~kkkk~S~kCw~f~~~d~i~ 114 (152)
T 2qzq_A 84 -------------AAIFFEFKHYKPKKRFTSTKCFAFMEMDEIK 114 (152)
T ss_dssp -------------CEEEEEEEEEETTTTEEEEEEEEEEEGGGCC
T ss_pred -------------cEEEEEEEEecccceeeeeeeEEEEEhhhcc
Confidence 223334335443221 235666677777664
No 150
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=24.88 E-value=1e+02 Score=19.84 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 101 QIKQLAVKLKEAEARAEFAEKTVKKLQK 128 (622)
Q Consensus 101 ~i~~l~~~lkeae~rae~ae~~~~~l~~ 128 (622)
.++||++|.+|-=.+-..-+..|.+|..
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4578888888776666666666666654
No 151
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=24.87 E-value=1.4e+02 Score=19.04 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy1415 102 IKQLAVKLKEAEARAEFAEKTVKKLQKE 129 (622)
Q Consensus 102 i~~l~~~lkeae~rae~ae~~~~~l~~~ 129 (622)
++||++|.+|-=.+....|..|.+|++-
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4677777777766666666666666543
No 152
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=24.11 E-value=3.4 Score=54.25 Aligned_cols=43 Identities=9% Similarity=0.156 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHhhhhhcccccceeehhhhhhh
Q psy1415 107 VKLKEAEARAEFAEKTVKKL-------QKEVDRLEVSGHTVLGLGLAGLV 149 (622)
Q Consensus 107 ~~lkeae~rae~ae~~~~~l-------~~~~~~le~~~~~~~g~~~~~~~ 149 (622)
.+.+..+.|.+-|++-+..| +.+++.++..-.+++|+++.+--
T Consensus 2063 ~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~~L~GD~LLaaa 2112 (3245)
T 3vkg_A 2063 TESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASA 2112 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHhccHHHHHHHH
Confidence 33333444444444444433 44456667777888999876643
No 153
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=23.49 E-value=1.5e+02 Score=19.02 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy1415 102 IKQLAVKLKEAEARAEFAEKTVKKLQKE 129 (622)
Q Consensus 102 i~~l~~~lkeae~rae~ae~~~~~l~~~ 129 (622)
++||++|++|-=.+-...+..|.+|.+-
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 6788888888766666666677777553
No 154
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=22.14 E-value=1.5e+02 Score=25.34 Aligned_cols=40 Identities=18% Similarity=0.286 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1415 94 RVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRL 133 (622)
Q Consensus 94 ~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~l 133 (622)
+....+..++.++.++.+.|.+.......-.+++.++.+|
T Consensus 77 ~k~eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~L 116 (129)
T 2fxo_A 77 NKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSEL 116 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666666666666666655555555555555444
No 155
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=21.06 E-value=1.2e+02 Score=23.18 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy1415 106 AVKLKEAEARAEFAEKTVKKLQKEV 130 (622)
Q Consensus 106 ~~~lkeae~rae~ae~~~~~l~~~~ 130 (622)
+.||+++|.|-..-|.+|..||..+
T Consensus 6 ~~kLq~~E~~N~~Le~~v~~le~~L 30 (72)
T 3cve_A 6 HMKLQEVEIRNKDLEGQLSEMEQRL 30 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444444444433344444443333
No 156
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=20.81 E-value=2.3e+02 Score=20.90 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 96 EEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 96 ~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
..-...+..|..+.++-+..-..-+..+..|+.|+..|.
T Consensus 19 ~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk 57 (63)
T 1ci6_A 19 QKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666777777776666666677777777776653
No 157
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=20.77 E-value=2e+02 Score=24.13 Aligned_cols=36 Identities=31% Similarity=0.387 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1415 93 QRVEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQK 128 (622)
Q Consensus 93 ~~e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~ 128 (622)
.+..+.+.+|+.|+.+|++|+.-+|.-.+....+.-
T Consensus 71 ~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~ 106 (121)
T 3mq7_A 71 KKVEELEGEITTLNHKLQDASAEVERLRRENQVLSV 106 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhh
Confidence 457788888999999999888777665554444433
No 158
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=20.69 E-value=6.4 Score=25.53 Aligned_cols=22 Identities=27% Similarity=0.418 Sum_probs=16.1
Q ss_pred cccceEeeehhhHHHHHhhhee
Q psy1415 14 VSGHTVLGLGLAGLVFVATVCL 35 (622)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~ 35 (622)
+++.|++|++++.++..+-+++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~ 25 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIAL 25 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHH
Confidence 4568899999988876665543
No 159
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=20.50 E-value=2.4e+02 Score=20.58 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1415 95 VEEYKRQIKQLAVKLKEAEARAEFAEKTVKKLQKEVDRLE 134 (622)
Q Consensus 95 e~~~~~~i~~l~~~lkeae~rae~ae~~~~~l~~~~~~le 134 (622)
.+.-.+.+..|+.+..+-+..-+.-...+..|+.++..|.
T Consensus 17 R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk 56 (62)
T 1jnm_A 17 RKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLK 56 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666776666666666666666677777666654
Done!