BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14159
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 96/133 (72%), Gaps = 8/133 (6%)
Query: 94 PVQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHI 149
PVQ + +Y P G+ + ED CL++ +F+NDVIIDFYL +LL E A+ + E++HI
Sbjct: 731 PVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHI 790
Query: 150 FSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNA 209
FS+FFYK LT RK + E +P +S A++RH RV++WT++IN+F KD+I VP+N ++
Sbjct: 791 FSSFFYKCLT----RKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESS 846
Query: 210 HWFLAIICFPGLK 222
HW+LA+ICFP L+
Sbjct: 847 HWYLAVICFPWLE 859
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 96/133 (72%), Gaps = 8/133 (6%)
Query: 94 PVQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHI 149
PVQ + +Y P G+ + ED CL++ +F+NDVIIDFYL +LL E A+ + E++HI
Sbjct: 731 PVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHI 790
Query: 150 FSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNA 209
FS+FFYK LT RK + E +P +S A++RH RV++WT++IN+F KD+I VP+N ++
Sbjct: 791 FSSFFYKCLT----RKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESS 846
Query: 210 HWFLAIICFPGLK 222
HW+LA+ICFP L+
Sbjct: 847 HWYLAVICFPWLE 859
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 97/133 (72%), Gaps = 8/133 (6%)
Query: 94 PVQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHI 149
PVQ + +Y P G+ + ED CL++ +F+NDVIIDFYL +L+ E A+ + E++HI
Sbjct: 741 PVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHI 800
Query: 150 FSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNA 209
FS+FFYK LT RK + E +P++S A++RH RV++WT++IN+F KD+I VP+N ++
Sbjct: 801 FSSFFYKCLT----RKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESS 856
Query: 210 HWFLAIICFPGLK 222
HW+LA+ICFP L+
Sbjct: 857 HWYLAVICFPWLE 869
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 96/132 (72%), Gaps = 8/132 (6%)
Query: 95 VQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIF 150
VQ + +Y P G+ + ED CL++ +F+NDVIIDFYL +L+ E A+ + E++HIF
Sbjct: 745 VQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIF 804
Query: 151 STFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAH 210
S+FFYK LT RK + E +P++S A++RH RV++WT++IN+F KD+I VP+N ++H
Sbjct: 805 SSFFYKCLT----RKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSH 860
Query: 211 WFLAIICFPGLK 222
W+LA+ICFP L+
Sbjct: 861 WYLAVICFPWLE 872
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 92/133 (69%), Gaps = 9/133 (6%)
Query: 94 PVQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHI 149
PV+ + +Y P GIS+ ED CL++ +F+NDVIIDFYL +L+ E ++ HI
Sbjct: 650 PVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHI 709
Query: 150 FSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNA 209
FS+FFYKRL Q+ R + ++S +KRH RV++WT+++++FEKDFI VP+N A
Sbjct: 710 FSSFFYKRLNQRERRNHETT-----NLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAA 764
Query: 210 HWFLAIICFPGLK 222
HWFLA++CFPGL+
Sbjct: 765 HWFLAVVCFPGLE 777
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 91/133 (68%), Gaps = 9/133 (6%)
Query: 94 PVQTIYIYKP----TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHI 149
PV+ + +Y P GIS+ ED CL + +F+NDVIIDFYL +L+ E ++ HI
Sbjct: 670 PVEKLIVYPPPPAKGGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHI 729
Query: 150 FSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNA 209
FS+FFYKRL Q+ R + ++S +KRH RV++WT+++++FEKDFI VP+N A
Sbjct: 730 FSSFFYKRLNQRERRNPETT-----NLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAA 784
Query: 210 HWFLAIICFPGLK 222
HWFLA++CFPGL+
Sbjct: 785 HWFLAVVCFPGLE 797
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 18/126 (14%)
Query: 97 TIYIYKPTG---ISINTEDYACLDKEQFINDVIIDFYLGFLLQEMAT--PHIREKTHIFS 151
TI +Y +G I+I D L++ +F+ND I+DFYL +L ++ T P + THIF+
Sbjct: 335 TILVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFN 394
Query: 152 TFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHW 211
TFFY RLT K + H V+ WT+ +++F K +I+VPIN HW
Sbjct: 395 TFFYNRLTSKDK-------------DGKRLGHRGVRKWTQKVDLFHKKYIIVPINETFHW 441
Query: 212 FLAIIC 217
+LAIIC
Sbjct: 442 YLAIIC 447
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 102 KPTGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQK 161
+P + + +D L +FIND IIDFY+ +L ++ P R +
Sbjct: 301 EPDAVVVRKQDIELLKPRRFINDTIIDFYIKYLKNRIS-PKERGRF--------HFFNCF 351
Query: 162 PTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICFPG 220
RK++ +G P ++ + RVQ WTKN+++FEKD+I +PIN + HW L IIC PG
Sbjct: 352 FFRKLANLDKGTPSTCGGREAYQRVQKWTKNVDLFEKDYIFIPINCSFHWSLVIICHPG 410
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 103 PTGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKP 162
P +SI D L E F+ND IIDFY+ +L ++ T S FF K
Sbjct: 391 PDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKL----- 445
Query: 163 TRKISGSIEGDPH-ISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICFPG 220
++ DP I+ K RV+ WT+ +++F KD+I VP+N N HW L +IC PG
Sbjct: 446 -----ADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPG 499
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
Query: 104 TGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHI--REKTHIFSTFFYKRLTQK 161
+ +I +D+ CL + ++ND I+DF+ F ++ I RE+ H+ S+FFY +L
Sbjct: 440 SSYTITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFYTKLISN 499
Query: 162 PTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIIC 217
P +S V+ W N ++F K ++V+PIN + HWF II
Sbjct: 500 PA-----------------DYYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIIT 538
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 80 VNSAAPPIPAPVSQPVQTIYIYKPTGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMA 139
V A +P + + + P + + +D CL +++ +++FY+ FL Q+++
Sbjct: 317 VAEQAAELPEGLQEDICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQIS 376
Query: 140 TPH-IREKTHIFSTFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEK 198
+ + I H F+T+FYK+L+ T K G+ + + R + W K I++F K
Sbjct: 377 SSNQISADCHFFNTYFYKKLSDAVTYK--GNDKDAFFV--------RFRRWWKGIDLFRK 426
Query: 199 DFIVVPINSNAHWFLAIICFPGLK 222
+I +PI+ + HW L I+C P K
Sbjct: 427 AYIFIPIHEDLHWSLVIVCIPDKK 450
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 27/114 (23%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQ---EMATPHIREKTHIFSTFFYKRLTQKP 162
+ I D L ++ND +I+FY+ L++ + P + H+FSTFFY +L
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPAL----HVFSTFFYPKLK--- 447
Query: 163 TRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
SG + V+ WTK +N+FE++ I+VPI+ HW L +I
Sbjct: 448 ----SGGYQA-------------VKRWTKGVNLFEQEIILVPIHRKVHWSLVVI 484
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 27/114 (23%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQ---EMATPHIREKTHIFSTFFYKRLTQKP 162
+ I D L ++ND +I+FY+ L++ + P + H+FSTFFY +L
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPAL----HVFSTFFYPKLK--- 447
Query: 163 TRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
SG + V+ WTK +N+FE++ I+VPI+ HW L +I
Sbjct: 448 ----SGGYQA-------------VKRWTKGVNLFEQEIILVPIHRKVHWSLVVI 484
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQ---EMATPHIREKTHIFSTFFYKRLTQKP 162
++I +D L+ ++ND II+FY+ L++ E P + H F+TFF+ +L
Sbjct: 451 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSV----HAFNTFFFTKL---- 502
Query: 163 TRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICF--PG 220
K +G + V+ WTK ++VF D ++VPI+ HW LA++ F
Sbjct: 503 --KTAG--------------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN 546
Query: 221 LKGCETPEGRAVEECQRFRSLRKRERI--KLDEMQKTGRTLY 260
+ ++ G E C+ K+E I K E G L+
Sbjct: 547 ITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLF 588
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQ---EMATPHIREKTHIFSTFFYKRLTQKP 162
++I +D L+ ++ND II+FY+ L++ E P + H F+TFF+ +L
Sbjct: 450 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSV----HAFNTFFFTKL---- 501
Query: 163 TRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICF--PG 220
K +G + V+ WTK ++VF D ++VPI+ HW LA++ F
Sbjct: 502 --KTAG--------------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN 545
Query: 221 LKGCETPEGRAVEECQRFRSLRKRERI--KLDEMQKTGRTLY 260
+ ++ G E C+ K+E I K E G L+
Sbjct: 546 ITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLF 587
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQEM-ATPHIREKTHIFSTFFYKRLTQKPTR 164
+ ++ +D CL +++ +I+FY+ ++ + + H F+TFFYK+LT+ +
Sbjct: 331 VQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSY 390
Query: 165 KISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICFP 219
K + + D + + + W K ++F K +I +PI+ + HW L IIC P
Sbjct: 391 KGN---DRDAYFV-------KFRRWWKGFDLFCKSYIFIPIHEDLHWSLVIICIP 435
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 27/116 (23%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQ---EMATPHIREKTHIFSTFFYKRLTQKP 162
++I +D L+ ++ND II+FY+ L++ E P + H F+TFF+ +L
Sbjct: 446 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGFPSV----HAFNTFFFTKL---- 497
Query: 163 TRKISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICF 218
K +G + V+ WTK ++VF D ++VPI+ HW LA++ F
Sbjct: 498 --KTAG--------------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDF 537
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRK 165
+ I D L ++ND +I+FY+ L+ E + H FSTFFY +L
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLV-ERSKKQGYPALHAFSTFFYPKLK------ 446
Query: 166 ISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
SG + V+ WTK +N+FE++ ++VPI+ HW L ++
Sbjct: 447 -SGGYQA-------------VKRWTKGVNLFEQELVLVPIHRKVHWSLVVM 483
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 105 GISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTR 164
I+I D+ CL ++ +ND +IDFYL +++ + + + F+ L+ R
Sbjct: 130 SIAIRISDFCCLQEKDLLNDTMIDFYLNHIVEHVLPDSNGSNVTVLPSIFWHNLS---LR 186
Query: 165 KISGSIEGDPHISAAKK---RHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAIICFP 219
+ + E + +S +K + + + + ++ + D+IVVP+N HW LA+IC P
Sbjct: 187 QHAFDSEDEKMMSDEQKMDLKFGDLHDFVADFDLQDFDYIVVPVNEWEHWSLAVICHP 244
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRK 165
+ I D L ++ND +I+FY+ L+ E + H STFFY +L
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLV-ERSKKQGYPALHALSTFFYPKLK------ 446
Query: 166 ISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
SG + V+ WTK +N+F+++ ++VPI+ HW L ++
Sbjct: 447 -SGGYQA-------------VKRWTKGVNLFDQELVLVPIHRKVHWSLVVM 483
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 106 ISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRK 165
I I +D A L ++ND II+FYL + K + F+TFFY + K
Sbjct: 501 IQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPKIYAFNTFFYSNIVSKG--- 557
Query: 166 ISGSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
++ V+ WT+ +++F D ++VP++ HW +A+I
Sbjct: 558 -----------------YASVKRWTRKVDIFAFDIVLVPVHLGMHWCMAVI 591
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 108 INTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRKIS 167
++ +D A LD + ++ND +I+ Y E+ + +K H F++FF+++L K
Sbjct: 569 LDMDDLATLDGQNWLNDQVINMY-----GELIMDAVPDKVHFFNSFFHRQLVTKG----- 618
Query: 168 GSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
++ V+ WTK +++F+K +++PI+ HW L +
Sbjct: 619 ---------------YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITV 652
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 108 INTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRKIS 167
++ +D A LD + ++ND +I+ Y E+ + +K H F++FF+++L K
Sbjct: 569 LDMDDLATLDGQNWLNDQVINMY-----GELIMDAVPDKVHFFNSFFHRQLVTKG----- 618
Query: 168 GSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
++ V+ WTK +++F+K +++PI+ HW L +
Sbjct: 619 ---------------YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITV 652
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 108 INTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRKIS 167
++ +D A LD + ++ND +I+ Y E+ + +K H F++FF+++L K
Sbjct: 563 LDMDDLATLDGQNWLNDQVINMY-----GELIMDAVPDKVHFFNSFFHRQLVTKG----- 612
Query: 168 GSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFLAII 216
++ V+ WTK +++F+K +++PI+ HW L +
Sbjct: 613 ---------------YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITV 646
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 108 INTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRKIS 167
+ +D L + ++ND +++ Y ++ + EK H F++FFY +L
Sbjct: 382 LTMDDLGTLYGQNWLNDQVMNMYGDLVMDT-----VPEKVHFFNSFFYDKLR-------- 428
Query: 168 GSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFL 213
K + V+ WTKN+++F K+ +++PI+ HW L
Sbjct: 429 ------------TKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSL 462
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 108 INTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTRKIS 167
+ +D L + ++ND +++ Y ++ + EK H F++FFY +L
Sbjct: 388 LTMDDLGTLYGQNWLNDQVMNMYGDLVMDT-----VPEKVHFFNSFFYDKLR-------- 434
Query: 168 GSIEGDPHISAAKKRHSRVQSWTKNINVFEKDFIVVPINSNAHWFL 213
K + V+ WTKN+++F K+ +++PI+ HW L
Sbjct: 435 ------------TKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSL 468
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 36/173 (20%)
Query: 62 IKEANNILVKSSPPELRNVNSAAPPIP------APVSQPV------QTIYIYKPTGISIN 109
K+ NN LV S+ + P P A V+ + + + +K + I I+
Sbjct: 83 FKDGNNFLVSSTETKKLVAFCGEPFQPLNEEEVALVNSALSKRNRKKILVSHKNSNIDIS 142
Query: 110 TEDYACLDKEQFINDVIIDFYLGFLLQEMAT--PHIREKTHIFSTFFYKRLTQKPTRKIS 167
E CL Q++ND + + YL LL+E T P K H F+TFFY +L
Sbjct: 143 GETLQCLRPNQWLNDDVTNLYLE-LLKERQTRDPQKYFKCHFFNTFFYVKL--------- 192
Query: 168 GSIEGDPHISAAKKRHSRVQSWTK----NINVFEKDFIVVPINSNAHWFLAII 216
+S + + V WT ++ + D I VPI+ + HW L +I
Sbjct: 193 --------VSGSGYNYKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVI 237
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 22/126 (17%)
Query: 96 QTIYIYKPTGISINTEDYACLDKEQFINDVIIDFYLGFLLQ-EMATPHIREKTHIFSTFF 154
+ + ++ + I I E CL ++ND +I+ YL L + E P K H F+TFF
Sbjct: 278 KVLATHENSNIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFF 337
Query: 155 YKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTK----NINVFEKDFIVVPINSNAH 210
YK+L +S + V+ WT + + D I VPI+ H
Sbjct: 338 YKKL-----------------VSDSGYNFKAVRRWTTQRKLGYALIDCDMIFVPIHRGVH 380
Query: 211 WFLAII 216
W LA+I
Sbjct: 381 WTLAVI 386
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 27/127 (21%)
Query: 92 SQPVQTIYIYKPTGISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFS 151
S+P+ T + I I +D L Q++ND +I+FY+ + + + H F+
Sbjct: 368 SEPIITKF-----NIPITLKDLHTLRNRQWLNDEVINFYMNLISERSKIDSSLPRVHGFN 422
Query: 152 TFFYKRLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWTKN--INVFEKDFIVVPINSNA 209
TFFY L ++ ++ V+ W K +N+ + D + +P++ +
Sbjct: 423 TFFYTSL--------------------QRRGYAGVRRWAKKARVNIADMDAVFIPVHLDV 462
Query: 210 HWFLAII 216
HW +A+I
Sbjct: 463 HWCMAVI 469
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 98 IYIYKPTGISINTEDYACLDKEQFINDVIIDFYLGFLLQ-EMATPHIREKTHIFSTFFYK 156
+ +K + I I + CL +++ND +I+ Y+ L + E P K H F+TFF+
Sbjct: 292 LVTHKNSNIDITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFT 351
Query: 157 RLTQKPTRKISGSIEGDPHISAAKKRHSRVQSWT--KNINVFEKDF--IVVPINSNAHWF 212
+L SA + V+ WT K + KD I +PI+ N HW
Sbjct: 352 KLVN----------------SATGYNYGAVRRWTSMKRLGYHLKDCDKIFIPIHMNIHWT 395
Query: 213 LAII 216
LA+I
Sbjct: 396 LAVI 399
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 29/115 (25%)
Query: 105 GISINTEDYACLDKEQFINDVIIDFYLGFLLQEMATPHIREKTHIFSTFFYKRLTQKPTR 164
I I D+ L +++ND II+F++ ++ E +TP+ T F++FFY L+++
Sbjct: 432 NIEITVRDFKTLAPRRWLNDTIIEFFMKYI--EKSTPN----TVAFNSFFYTNLSERG-- 483
Query: 165 KISGSIEGDPHISAAKKRHSRVQSWT--KNINVFEKDFIVVPINSN-AHWFLAII 216
+ V+ W K + + D I PIN N +HW L II
Sbjct: 484 ------------------YQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGII 520
>sp|P0AES1|GSP_SHIFL Bifunctional glutathionylspermidine synthetase/amidase OS=Shigella
flexneri GN=gsp PE=3 SV=1
Length = 619
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 94 PVQTIYIYKPTGISINTEDYACLDKEQFINDVIIDFYL 131
P T+ Y P G++I + DY+ LD +++ +D + Y+
Sbjct: 11 PFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYI 48
>sp|P0AES0|GSP_ECOLI Bifunctional glutathionylspermidine synthetase/amidase
OS=Escherichia coli (strain K12) GN=gsp PE=1 SV=1
Length = 619
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 94 PVQTIYIYKPTGISINTEDYACLDKEQFINDVIIDFYL 131
P T+ Y P G++I + DY+ LD +++ +D + Y+
Sbjct: 11 PFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYI 48
>sp|A3LN53|SSN2_PICST Mediator of RNA polymerase II transcription subunit 13
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=SSN2 PE=3 SV=2
Length = 1660
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 36 LSDIYSKTSSGRSEEPQDGPCLEELSIKEANNILVKSSPPELRNVNSAAPPIPAPVSQPV 95
+SD + SG+ P P + L I + + KSS P+ + + P +P P+
Sbjct: 510 ISDKEAAPDSGKYSTPAKEPKFKYLDIPKDQMTIKKSSSPDYNDPGAPLPIMPTPIIPVA 569
Query: 96 QTIYIYK-PTGISINTEDYACLDKE 119
++Y PT +I TE D +
Sbjct: 570 NSVYSTNPPTAAAIGTEGVGLSDDQ 594
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,383,796
Number of Sequences: 539616
Number of extensions: 4394763
Number of successful extensions: 11284
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 11210
Number of HSP's gapped (non-prelim): 43
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)