BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1416
(177 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINV+EMFMAIT VLR+KKE+K
Sbjct: 117 LVGNKNDSPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERK 176
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
ERQ + S+TVN+RK T + KKKCC
Sbjct: 177 ERQAIQTSETVNLRKSTKQH--KKKCC 201
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL-NSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINV+EMFMAIT VLR+KKE+KERQ + S+TVN+RK T + KKK
Sbjct: 142 MGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETVNLRKSTKQH--KKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|307215038|gb|EFN89865.1| Ras-related protein Rab-35 [Harpegnathos saltator]
Length = 189
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT VLR+KKE K
Sbjct: 105 LVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKESK 164
Query: 152 ERQVLN-SDTVNIRKHTTKPGGKKKCC 177
ERQ + +DTVN+RK T + +KKCC
Sbjct: 165 ERQAIQPNDTVNLRKSTRQH--RKKCC 189
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLN-SDTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINVEEMFMAIT VLR+KKE KERQ + +DTVN+RK T + +KK
Sbjct: 130 MGIQLFETSAKDNINVEEMFMAITRQVLRTKKESKERQAIQPNDTVNLRKSTRQH--RKK 187
Query: 60 VC 61
C
Sbjct: 188 CC 189
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINV+EMFMAIT VLR+KKE+K
Sbjct: 117 LVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERK 176
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
ERQ + S+TVN+RK T + KKKCC
Sbjct: 177 ERQAIQTSETVNLRKSTKQH--KKKCC 201
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL-NSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINV+EMFMAIT VLR+KKE+KERQ + S+TVN+RK T + KKK
Sbjct: 142 MGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETVNLRKSTKQH--KKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT VLR+KKE+K
Sbjct: 117 LVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERK 176
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
ERQ + + +TVN+RK T + +KKCC
Sbjct: 177 ERQAIQTNETVNLRKSTKQH--RKKCC 201
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINVEEMFMAIT VLR+KKE+KERQ + + +TVN+RK T + +KK
Sbjct: 142 MGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTNETVNLRKSTKQH--RKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT VLR+KKE+K
Sbjct: 117 LVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERK 176
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
ERQ + + +TVN+RK T + +KKCC
Sbjct: 177 ERQAIQTNETVNLRKSTKQH--RKKCC 201
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINVEEMFMAIT VLR+KKE+KERQ + + +TVN+RK T + +KK
Sbjct: 142 MGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTNETVNLRKSTKQH--RKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDN+NV+EMFMAIT VLR+KKE+K
Sbjct: 117 LVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNVNVQEMFMAITRQVLRTKKERK 176
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
ERQ + S+TVN+RK T + KKKCC
Sbjct: 177 ERQAIQTSETVNLRKSTKQH--KKKCC 201
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL-NSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDN+NV+EMFMAIT VLR+KKE+KERQ + S+TVN+RK T + KKK
Sbjct: 142 MGIQLFETSAKDNVNVQEMFMAITRQVLRTKKERKERQAIQTSETVNLRKSTKQH--KKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINV+EMFMAIT VLR+KKE+K
Sbjct: 165 LVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTKKERK 224
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
ERQ + S+TVN+RK T + KKKCC
Sbjct: 225 ERQAIQTSETVNLRKSTKQH--KKKCC 249
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL-NSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINV+EMFMAIT VLR+KKE+KERQ + S+TVN+RK T + KKK
Sbjct: 190 MGIQLFETSAKDNINVQEMFMAITRQVLRTKKERKERQAIQTSETVNLRKSTKQH--KKK 247
Query: 60 VC 61
C
Sbjct: 248 CC 249
>gi|322790897|gb|EFZ15563.1| hypothetical protein SINV_05542 [Solenopsis invicta]
Length = 184
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT VLR+KKE+K
Sbjct: 100 LVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQVLRTKKERK 159
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
ERQ + + +TVN+RK T + +KKCC
Sbjct: 160 ERQAIQTNETVNLRKSTKQH--RKKCC 184
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
MGIQLFETSAKDNINVEEMFMAIT VLR+KKE+KERQ + + +TVN+RK T + +KK
Sbjct: 125 MGIQLFETSAKDNINVEEMFMAITRQVLRTKKERKERQAIQTNETVNLRKSTKQH--RKK 182
Query: 60 VC 61
C
Sbjct: 183 CC 184
>gi|193652503|ref|XP_001951946.1| PREDICTED: ras-related protein Rab-35-like [Acyrthosiphon pisum]
Length = 202
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 74/87 (85%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFA+QMGIQL+ETSAKDNINVE+MFM+IT VLR+KKE K
Sbjct: 117 LVGNKNDAPDRKVVLTEDAQRFADQMGIQLYETSAKDNINVEQMFMSITKQVLRNKKETK 176
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
ERQ N+D VN+RK +K G K+KCC
Sbjct: 177 ERQAHQNNDVVNLRKGHSK-GAKRKCC 202
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL-NSDTVNIRKHTTKPGGKKK 59
MGIQL+ETSAKDNINVE+MFM+IT VLR+KKE KERQ N+D VN+RK +K G K+K
Sbjct: 142 MGIQLYETSAKDNINVEQMFMSITKQVLRNKKETKERQAHQNNDVVNLRKGHSK-GAKRK 200
Query: 60 VC 61
C
Sbjct: 201 CC 202
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 73/88 (82%), Gaps = 7/88 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +KVVLTEDAQRFA+QMGIQLFETSAK+NINVEEMF AIT +VL+SKKEQK
Sbjct: 117 LVGNKNDDPSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQK 176
Query: 152 ERQVLNSDTVNIRKHTTKPGG--KKKCC 177
ERQ + D + + KPGG KKKCC
Sbjct: 177 ERQQVPDDKLRL-----KPGGQKKKKCC 199
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 5/59 (8%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAK+NINVEEMF AIT +VL+SKKEQKERQ + D + + KPGG+KK
Sbjct: 142 MGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQVPDDKLRL-----KPGGQKK 195
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative [Tribolium
castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFA+ M IQLFETSAKDN+NVEEMFMAIT LVLRSK+E K
Sbjct: 117 LVGNKNDTPDRKVVLTEDAQRFADTMNIQLFETSAKDNVNVEEMFMAITRLVLRSKQEMK 176
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
ERQ + ++TVN+RK + GKKKCC
Sbjct: 177 ERQNITQNETVNLRK--SNKQGKKKCC 201
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKPGGKKK 59
M IQLFETSAKDN+NVEEMFMAIT LVLRSK+E KERQ + ++TVN+RK + GKKK
Sbjct: 142 MNIQLFETSAKDNVNVEEMFMAITRLVLRSKQEMKERQNITQNETVNLRK--SNKQGKKK 199
Query: 60 VC 61
C
Sbjct: 200 CC 201
>gi|427778911|gb|JAA54907.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 257
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 73/89 (82%), Gaps = 8/89 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +KVVLTEDAQRFA+QMGIQLFETSAK+NINVEEMF AIT +VL+SKKEQK
Sbjct: 174 LVGNKNDDPSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQK 233
Query: 152 ERQVLNSDTVNIRKHTTKPGG---KKKCC 177
ERQ + D + + KPGG KK+CC
Sbjct: 234 ERQQVPEDKLKL-----KPGGHKKKKQCC 257
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAK+NINVEEMF AIT +VL+SKKEQKERQ + D + + KPGG KK
Sbjct: 199 MGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQVPEDKLKL-----KPGGHKK 252
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 73/89 (82%), Gaps = 8/89 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +KVVLTEDAQRFA+QMGIQLFETSAK+NINVEEMF AIT +VL+SKKEQK
Sbjct: 117 LVGNKNDDPSRKVVLTEDAQRFADQMGIQLFETSAKENINVEEMFNAITRMVLKSKKEQK 176
Query: 152 ERQVLNSDTVNIRKHTTKPGG---KKKCC 177
ERQ + D + + KPGG KK+CC
Sbjct: 177 ERQQVPEDKLKL-----KPGGHKKKKQCC 200
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKK 59
MGIQLFETSAK+NINVEEMF AIT +VL+SKKEQKERQ + D + + KPGG KK
Sbjct: 142 MGIQLFETSAKENINVEEMFNAITRMVLKSKKEQKERQQVPEDKLKL-----KPGGHKK 195
>gi|156553809|ref|XP_001603302.1| PREDICTED: ras-related protein Rab-35-like [Nasonia vitripennis]
Length = 202
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDAQRFANQMGI+LFETSAKDN NVEEMFMAIT VLR+KKE K
Sbjct: 118 LVGNKNDAPNQKVVLTEDAQRFANQMGIKLFETSAKDNTNVEEMFMAITREVLRTKKESK 177
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
ERQ + +TVN+RK T + +KKCC
Sbjct: 178 ERQATKTNETVNLRKSTKQ--NRKKCC 202
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
MGI+LFETSAKDN NVEEMFMAIT VLR+KKE KERQ + +TVN+RK T + +KK
Sbjct: 143 MGIKLFETSAKDNTNVEEMFMAITREVLRTKKESKERQATKTNETVNLRKSTKQ--NRKK 200
Query: 60 VC 61
C
Sbjct: 201 CC 202
>gi|242010871|ref|XP_002426181.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212510232|gb|EEB13443.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 187
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVLTEDA+RFA+QM +QLFETSAKDNINVEEMFM+IT VLR+K E K
Sbjct: 102 LVGNKNDTPDRKVVLTEDAKRFADQMSLQLFETSAKDNINVEEMFMSITRQVLRTKLEAK 161
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
ERQ S DTVN+RK K K KCC
Sbjct: 162 ERQANQSNDTVNLRKSNNKF-RKNKCC 187
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTK 53
M +QLFETSAKDNINVEEMFM+IT VLR+K E KERQ S DTVN+RK K
Sbjct: 127 MSLQLFETSAKDNINVEEMFMSITRQVLRTKLEAKERQANQSNDTVNLRKSNNK 180
>gi|126697446|gb|ABO26680.1| RAB protein [Haliotis discus discus]
Length = 200
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+DDP +KVVLT+DAQRFA+QMGIQL+ETSAK+NINVEEMF+AIT LVL +KKEQ+
Sbjct: 117 LVGNKDDDPDRKVVLTQDAQRFADQMGIQLYETSAKENINVEEMFLAITRLVLSTKKEQQ 176
Query: 152 ERQVLNSDTVNIRKHTTKPGG--KKKCC 177
++ T+ + H GG KKKCC
Sbjct: 177 KKAADAPQTIKLDGH----GGSKKKKCC 200
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
MGIQL+ETSAK+NINVEEMF+AIT LVL +KKEQ+++ T+ + H G KKK
Sbjct: 142 MGIQLYETSAKENINVEEMFLAITRLVLSTKKEQQKKAADAPQTIKLDGH---GGSKKKK 198
Query: 61 C 61
C
Sbjct: 199 C 199
>gi|157136703|ref|XP_001656883.1| ras-related protein Rab, putative [Aedes aegypti]
gi|94469070|gb|ABF18384.1| RAB protein [Aedes aegypti]
gi|108869891|gb|EAT34116.1| AAEL013620-PA [Aedes aegypti]
Length = 203
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 69/88 (78%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-Q 150
LVGNKNDDP +KVV+TEDAQRFANQM IQLFETSAKDNINVEEMF+AIT VLR KK+ Q
Sbjct: 117 LVGNKNDDPARKVVITEDAQRFANQMDIQLFETSAKDNINVEEMFLAITEQVLRHKKQTQ 176
Query: 151 KERQVLNS-DTVNIRKHTTKPGGKKKCC 177
K+ Q S DTVN+RK K KCC
Sbjct: 177 KQVQSDQSNDTVNLRKGANIK-KKNKCC 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-QKERQVLNS-DTVNIRK 49
M IQLFETSAKDNINVEEMF+AIT VLR KK+ QK+ Q S DTVN+RK
Sbjct: 142 MDIQLFETSAKDNINVEEMFLAITEQVLRHKKQTQKQVQSDQSNDTVNLRK 192
>gi|321470661|gb|EFX81636.1| hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex]
Length = 201
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D P +KVVLTEDAQRFA+QMGIQLFETSAKDN NVEEMF AIT VL +KKEQK
Sbjct: 117 LVGNKDDMPDRKVVLTEDAQRFASQMGIQLFETSAKDNKNVEEMFNAITQQVLLTKKEQK 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ +DT+ + K KP K KCC
Sbjct: 177 EQASNANDTITVGK-GRKPTKKSKCC 201
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
MGIQLFETSAKDN NVEEMF AIT VL +KKEQKE+ +DT+ + K KP K K
Sbjct: 142 MGIQLFETSAKDNKNVEEMFNAITQQVLLTKKEQKEQASNANDTITVGK-GRKPTKKSKC 200
Query: 61 C 61
C
Sbjct: 201 C 201
>gi|340378553|ref|XP_003387792.1| PREDICTED: ras-related protein Rab-35-like [Amphimedon
queenslandica]
Length = 93
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 64/85 (75%)
Query: 93 VGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 152
VGNKND P KKVV TEDAQ+F+ Q+GI L+ETSAK+NINVEE+F AIT LVL++KKE +
Sbjct: 9 VGNKNDSPDKKVVSTEDAQKFSEQIGIDLYETSAKENINVEEVFYAITRLVLKTKKETAK 68
Query: 153 RQVLNSDTVNIRKHTTKPGGKKKCC 177
DT+ + K + GGKKKCC
Sbjct: 69 DGGGTKDTIKVNKSSGAKGGKKKCC 93
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+GI L+ETSAK+NINVEE+F AIT LVL++KKE + DT+ + K + GGKKK
Sbjct: 33 IGIDLYETSAKENINVEEVFYAITRLVLKTKKETAKDGGGTKDTIKVNKSSGAKGGKKKC 92
Query: 61 C 61
C
Sbjct: 93 C 93
>gi|312371985|gb|EFR20038.1| hypothetical protein AND_20709 [Anopheles darlingi]
Length = 161
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +KVVLTEDAQRFANQM I+LFETSAKDNINVEEMF+AIT VLR KK+ +
Sbjct: 53 LVGNKNDDPNRKVVLTEDAQRFANQMDIRLFETSAKDNINVEEMFLAITEQVLRHKKKTQ 112
Query: 152 E--RQVLNSDTVNIRK 165
E + N+DTV ++K
Sbjct: 113 EDTKSEANNDTVQLKK 128
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE--RQVLNSDTVNIRKHTTKPGGKK 58
M I+LFETSAKDNINVEEMF+AIT VLR KK+ +E + N+DTV ++K + ++
Sbjct: 78 MDIRLFETSAKDNINVEEMFLAITEQVLRHKKKTQEDTKSEANNDTVQLKK---EYFSQR 134
Query: 59 KVCTVLNECAWLGCG 73
++ +LGCG
Sbjct: 135 QIMIWSWHAYFLGCG 149
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDPQ+KVVLTEDAQ FA++M I+LFETSAKDN NVEEMF A+T +VL++KKE+
Sbjct: 116 LVGNKNDDPQRKVVLTEDAQAFADRMNIELFETSAKDNFNVEEMFNAVTRMVLKTKKEEL 175
Query: 152 ERQVLNSDTVNIRKHTTKPGGK-KKCC 177
++ S N+R + G K KCC
Sbjct: 176 RDNLMTSKNDNVRLRKNQKGKKGSKCC 202
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
M I+LFETSAKDN NVEEMF A+T +VL++KKE+ ++ S N+R + G K
Sbjct: 141 MNIELFETSAKDNFNVEEMFNAVTRMVLKTKKEELRDNLMTSKNDNVRLRKNQKGKKGSK 200
Query: 61 C 61
C
Sbjct: 201 C 201
>gi|357631591|gb|EHJ79060.1| putative ras-related protein Rab [Danaus plexippus]
Length = 201
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVV+TEDAQRFANQM I LFETSAK+NINVEEMF+ IT +VLRSK E K
Sbjct: 117 LVGNKNDCPSRKVVVTEDAQRFANQMNIPLFETSAKENINVEEMFLTITKMVLRSKLEMK 176
Query: 152 ERQ-VLNSDTVNI 163
ERQ V +DTVN+
Sbjct: 177 ERQNVTANDTVNL 189
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNI 47
M I LFETSAK+NINVEEMF+ IT +VLRSK E KERQ V +DTVN+
Sbjct: 142 MNIPLFETSAKENINVEEMFLTITKMVLRSKLEMKERQNVTANDTVNL 189
>gi|291407058|ref|XP_002719864.1| PREDICTED: RAB35, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 599
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 515 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 574
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 575 AKQQQQQQNDVVKLTKNSKR---KKRCC 599
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 540 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 596
Query: 59 KVC 61
+ C
Sbjct: 597 RCC 599
>gi|443719875|gb|ELU09827.1| hypothetical protein CAPTEDRAFT_21277 [Capitella teleta]
Length = 201
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 57/58 (98%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNK+DDP +KVVLT+DA+RFA+QMGIQLFETSAK+NINVEEMF+AIT+LVLRSKK+
Sbjct: 117 LVGNKDDDPDRKVVLTQDARRFADQMGIQLFETSAKENINVEEMFLAITSLVLRSKKD 174
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 33/33 (100%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 33
MGIQLFETSAK+NINVEEMF+AIT+LVLRSKK+
Sbjct: 142 MGIQLFETSAKENINVEEMFLAITSLVLRSKKD 174
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P +KVVL EDA+RFA+QM I LFETSAKDNINVEEMF +T +VL++KKEQK
Sbjct: 113 LVGNKNDCPDRKVVLYEDAKRFADQMTISLFETSAKDNINVEEMFTVMTKMVLQTKKEQK 172
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK-KCC 177
+RQ+ +D +R H K +K KCC
Sbjct: 173 DRQMETNDP--LRLHNNKTHKRKPKCC 197
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
M I LFETSAKDNINVEEMF +T +VL++KKEQK+RQ+ +D +R H K +K
Sbjct: 138 MTISLFETSAKDNINVEEMFTVMTKMVLQTKKEQKDRQMETNDP--LRLHNNKTHKRKPK 195
Query: 61 C 61
C
Sbjct: 196 C 196
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 4/76 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +KVV+TED+ RFA QM IQLFETSAKDN+NVEEMF+AIT VLR KK Q
Sbjct: 117 LVGNKNDDPNRKVVITEDSDRFAKQMDIQLFETSAKDNLNVEEMFLAITEQVLRHKK-QT 175
Query: 152 ERQV---LNSDTVNIR 164
++QV N+DTVN+R
Sbjct: 176 QKQVQTDQNNDTVNLR 191
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 4/51 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQV---LNSDTVNIR 48
M IQLFETSAKDN+NVEEMF+AIT VLR KK Q ++QV N+DTVN+R
Sbjct: 142 MDIQLFETSAKDNLNVEEMFLAITEQVLRHKK-QTQKQVQTDQNNDTVNLR 191
>gi|426374421|ref|XP_004054072.1| PREDICTED: uncharacterized protein LOC101141592 [Gorilla gorilla
gorilla]
Length = 459
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 375 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 434
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 435 AKQQQQQQNDVVKLTKNSKR---KKRCC 459
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 400 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 456
Query: 59 KVC 61
+ C
Sbjct: 457 RCC 459
>gi|395514073|ref|XP_003761245.1| PREDICTED: ras-related protein Rab-35 [Sarcophilus harrisii]
Length = 229
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KKE
Sbjct: 145 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKENL 204
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 205 AKQQQQQQNDVVKLTKNSKR---KKRCC 229
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 170 MGIQLFETSAKENVNVEEMFNCITELVLRAKKENLAKQQQQQQNDVVKLTKNSKR---KK 226
Query: 59 KVC 61
+ C
Sbjct: 227 RCC 229
>gi|402887857|ref|XP_003907297.1| PREDICTED: uncharacterized protein LOC101006908 [Papio anubis]
Length = 452
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 368 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 427
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 428 AKQQQQQQNDVVKLTKNSKR---KKRCC 452
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 393 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 449
Query: 59 KVC 61
+ C
Sbjct: 450 RCC 452
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 7/88 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDN+NVEEMF++IT VL+ K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFARQMDIELFETSAKDNVNVEEMFLSITRQVLQHKLRNA 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q E+Q DT+N++ K K KCC
Sbjct: 177 QNEQQ---KDTINLKHQKNKR--KSKCC 199
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 7/64 (10%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK--KEQKERQVLNSDTVNIRKHTTKPGGKK 58
M I+LFETSAKDN+NVEEMF++IT VL+ K Q E+Q DT+N++ K K
Sbjct: 142 MDIELFETSAKDNVNVEEMFLSITRQVLQHKLRNAQNEQQ---KDTINLKHQKNKR--KS 196
Query: 59 KVCT 62
K C+
Sbjct: 197 KCCS 200
>gi|338727753|ref|XP_001488922.3| PREDICTED: ras-related protein Rab-35-like [Equus caballus]
Length = 262
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 178 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 237
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 238 AKQQQQQQNDVVKLTKNSKR---KKRCC 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 203 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 259
Query: 59 KVC 61
+ C
Sbjct: 260 RCC 262
>gi|403281829|ref|XP_003932377.1| PREDICTED: ras-related protein Rab-35 [Saimiri boliviensis
boliviensis]
Length = 256
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 172 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 231
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 232 AKQQQQQQNDVVKLTKNSKR---KKRCC 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 197 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 253
Query: 59 KVC 61
+ C
Sbjct: 254 RCC 256
>gi|397525482|ref|XP_003832695.1| PREDICTED: ras-related protein Rab-35 [Pan paniscus]
Length = 311
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 227 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 286
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 287 AKQQQQQQNDVVKLTKNSKR---KKRCC 311
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 252 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 308
Query: 59 KVC 61
+ C
Sbjct: 309 RCC 311
>gi|444723190|gb|ELW63851.1| Ras-related protein Rab-35 [Tupaia chinensis]
Length = 317
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 233 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 292
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 293 AKQQQQQQNDVVKLTKNSKR---KKRCC 317
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 258 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 314
Query: 59 KVC 61
+ C
Sbjct: 315 RCC 317
>gi|327282620|ref|XP_003226040.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
gi|387017966|gb|AFJ51101.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 201
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+NINVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENINVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+NINVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENINVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|301789199|ref|XP_002930019.1| PREDICTED: ras-related protein Rab-35-like [Ailuropoda melanoleuca]
Length = 245
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 161 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 220
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 221 AKQQQQQQNDVVKLTKNSKR---KKRCC 245
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 186 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 242
Query: 59 KVC 61
+ C
Sbjct: 243 RCC 245
>gi|348584444|ref|XP_003477982.1| PREDICTED: ras-related protein Rab-35-like [Cavia porcellus]
Length = 268
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 184 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 243
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 244 AKQQQQQQNDVVKLTKNSKR---KKRCC 268
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 209 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 265
Query: 59 KVC 61
+ C
Sbjct: 266 RCC 268
>gi|351702226|gb|EHB05145.1| Ras-related protein Rab-35 [Heterocephalus glaber]
Length = 203
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 119 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 178
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 179 AKQQQQQQNDVVKLTKNSKR---KKRCC 203
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 144 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 200
Query: 59 KVC 61
+ C
Sbjct: 201 RCC 203
>gi|354467032|ref|XP_003495975.1| PREDICTED: ras-related protein Rab-35-like [Cricetulus griseus]
Length = 338
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 254 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 313
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 314 AKQQQQQQNDVVKLTKNSKR---KKRCC 338
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 279 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 335
Query: 59 KVC 61
+ C
Sbjct: 336 RCC 338
>gi|395834086|ref|XP_003790046.1| PREDICTED: uncharacterized protein LOC100942506 [Otolemur
garnettii]
Length = 459
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 375 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 434
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KK+CC
Sbjct: 435 AKQQQQQQNDVVKLTRNSKR---KKRCC 459
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + +++ + KK
Sbjct: 400 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTRNSKR---KK 456
Query: 59 KVC 61
+ C
Sbjct: 457 RCC 459
>gi|344295350|ref|XP_003419375.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-35-like
[Loxodonta africana]
Length = 252
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 168 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 227
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 228 AKQQQQQQNDVVKLTKNSKR---KKRCC 252
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 193 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 249
Query: 59 KVC 61
+ C
Sbjct: 250 RCC 252
>gi|60824864|gb|AAX36697.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|54696902|gb|AAV38823.1| RAB35, member RAS oncogene family [synthetic construct]
gi|54696908|gb|AAV38826.1| RAB35, member RAS oncogene family [synthetic construct]
gi|60830162|gb|AAX36914.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365974|gb|AAX42793.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365979|gb|AAX42794.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61370750|gb|AAX43546.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|296478535|tpg|DAA20650.1| TPA: RAB35, member RAS oncogene family [Bos taurus]
Length = 201
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|5803135|ref|NP_006852.1| ras-related protein Rab-35 isoform 1 [Homo sapiens]
gi|37718983|ref|NP_937806.1| ras-related protein Rab-35 [Mus musculus]
gi|61556789|ref|NP_001013064.1| ras-related protein Rab-35 [Rattus norvegicus]
gi|148229407|ref|NP_001091596.1| ras-related protein Rab-35 [Bos taurus]
gi|302565752|ref|NP_001181695.1| ras-related protein Rab-35 [Macaca mulatta]
gi|343168793|ref|NP_001230220.1| ras-related protein Rab-35 [Sus scrofa]
gi|332840547|ref|XP_003314008.1| PREDICTED: ras-related protein Rab-35 isoform 1 [Pan troglodytes]
gi|390468242|ref|XP_002753117.2| PREDICTED: ras-related protein Rab-35 [Callithrix jacchus]
gi|3024525|sp|Q15286.1|RAB35_HUMAN RecName: Full=Ras-related protein Rab-35; AltName: Full=GTP-binding
protein RAY; AltName: Full=Ras-related protein Rab-1C
gi|62900797|sp|Q5U316.1|RAB35_RAT RecName: Full=Ras-related protein Rab-35
gi|62901088|sp|Q6PHN9.1|RAB35_MOUSE RecName: Full=Ras-related protein Rab-35
gi|20379096|gb|AAM21108.1|AF498960_1 small GTP binding protein RAB35 [Homo sapiens]
gi|763122|emb|CAA56177.1| ray [Homo sapiens]
gi|3970972|gb|AAC83182.1| GTP-binding protein H-ray [Homo sapiens]
gi|16198501|gb|AAH15931.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|33990612|gb|AAH56466.1| RAB35, member RAS oncogene family [Mus musculus]
gi|49168460|emb|CAG38725.1| RAB35 [Homo sapiens]
gi|49456327|emb|CAG46484.1| RAB35 [Homo sapiens]
gi|54696910|gb|AAV38827.1| RAB35, member RAS oncogene family [Homo sapiens]
gi|55250410|gb|AAH85769.1| RAB35, member RAS oncogene family [Rattus norvegicus]
gi|60818474|gb|AAX36466.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61356141|gb|AAX41213.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61361052|gb|AAX41980.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61362982|gb|AAX42313.1| RAB35 member RAS oncogene family [synthetic construct]
gi|74140038|dbj|BAE33762.1| unnamed protein product [Mus musculus]
gi|112293031|dbj|BAF02893.1| Rab35 [Mus musculus]
gi|119618569|gb|EAW98163.1| RAB35, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123994149|gb|ABM84676.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126861|gb|ABM92203.1| RAB35, member RAS oncogene family [synthetic construct]
gi|124126895|gb|ABM92220.1| RAB35, member RAS oncogene family [synthetic construct]
gi|146186509|gb|AAI40522.1| RAB35 protein [Bos taurus]
gi|148687899|gb|EDL19846.1| RAB35, member RAS oncogene family [Mus musculus]
gi|149063543|gb|EDM13866.1| rCG21356 [Rattus norvegicus]
gi|189069099|dbj|BAG35437.1| unnamed protein product [Homo sapiens]
gi|261860342|dbj|BAI46693.1| RAB35, member RAS oncogene family [synthetic construct]
gi|380784769|gb|AFE64260.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|383415401|gb|AFH30914.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
gi|384942608|gb|AFI34909.1| ras-related protein Rab-35 isoform 1 [Macaca mulatta]
Length = 201
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|359322950|ref|XP_854240.3| PREDICTED: ras-related protein Rab-35 isoform 2 [Canis lupus
familiaris]
Length = 201
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|440909544|gb|ELR59443.1| Ras-related protein Rab-35, partial [Bos grunniens mutus]
Length = 200
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 116 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 175
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 176 AKQQQQQQNDVVKLTKNSKR---KKRCC 200
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 141 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 197
Query: 59 KVC 61
+ C
Sbjct: 198 RCC 200
>gi|332261926|ref|XP_003280016.1| PREDICTED: ras-related protein Rab-35 [Nomascus leucogenys]
Length = 211
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 127 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 186
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 187 AKQQQQQQNDVVKLTKNSKR---KKRCC 211
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 152 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 208
Query: 59 KVC 61
+ C
Sbjct: 209 RCC 211
>gi|410976786|ref|XP_003994794.1| PREDICTED: ras-related protein Rab-35 [Felis catus]
Length = 185
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 101 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 160
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 161 AKQQQQQQNDVVKLTKNSKR---KKRCC 185
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 126 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 182
Query: 59 KVC 61
+ C
Sbjct: 183 RCC 185
>gi|281341492|gb|EFB17076.1| hypothetical protein PANDA_020355 [Ailuropoda melanoleuca]
Length = 168
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 84 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 143
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 144 AKQQQQQQNDVVKLTKNSKR---KKRCC 168
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 109 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 165
Query: 59 KVC 61
+ C
Sbjct: 166 RCC 168
>gi|344237051|gb|EGV93154.1| Ras-related protein Rab-35 [Cricetulus griseus]
Length = 173
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 89 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 148
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 149 AKQQQQQQNDVVKLTKNSKR---KKRCC 173
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 114 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 170
Query: 59 KVC 61
+ C
Sbjct: 171 RCC 173
>gi|297693159|ref|XP_002823893.1| PREDICTED: ras-related protein Rab-35 [Pongo abelii]
Length = 201
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAAQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|417396991|gb|JAA45529.1| Putative gtp-binding protein [Desmodus rotundus]
Length = 201
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTRNSKR---KKRCC 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + +++ + KK
Sbjct: 142 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTRNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|432092844|gb|ELK25210.1| Ras-related protein Rab-35 [Myotis davidii]
Length = 204
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 120 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 179
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KK+CC
Sbjct: 180 AKQQQQQQNDVVKLTRNSKR---KKRCC 204
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + +++ + KK
Sbjct: 145 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTRNSKR---KK 201
Query: 59 KVC 61
+ C
Sbjct: 202 RCC 204
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCITELVLRAKKEVL 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KKKCC
Sbjct: 177 AKQQQQQQNDVVKLSKNSKR---KKKCC 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 142 MGINLFETSAKENINVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLSKNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|326929980|ref|XP_003211131.1| PREDICTED: ras-related protein Rab-35-like [Meleagris gallopavo]
Length = 201
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 142 MEIQLFETSAKENINVEEMFNCITELVLRAKKENLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|225706608|gb|ACO09150.1| Ras-related protein Rab-35 [Osmerus mordax]
gi|225717328|gb|ACO14510.1| Ras-related protein Rab-35 [Esox lucius]
Length = 201
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCITELVLRAKKEVL 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KKKCC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKKCC 201
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 142 MGINLFETSAKENINVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|449267738|gb|EMC78647.1| Ras-related protein Rab-35, partial [Columba livia]
Length = 184
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 100 LVGNKNDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENL 159
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 160 AKQQQQQQNDVVKLTKNSKR---KKRCC 184
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 125 MEIQLFETSAKENINVEEMFNCITELVLRAKKENLAKQQQQQQNDVVKLTKNSKR---KK 181
Query: 59 KVC 61
+ C
Sbjct: 182 RCC 184
>gi|71897245|ref|NP_001025840.1| ras-related protein Rab-35 [Gallus gallus]
gi|60098357|emb|CAH65009.1| hypothetical protein RCJMB04_1b12 [Gallus gallus]
Length = 201
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 142 MEIQLFETSAKENINVEEMFNCITELVLRAKKENLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|195046772|ref|XP_001992215.1| GH24326 [Drosophila grimshawi]
gi|193893056|gb|EDV91922.1| GH24326 [Drosophila grimshawi]
Length = 201
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 10/90 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT----NLVLRSK 147
LVGNKNDDP +KVV+TEDAQR+A QM I+LFETSAKDNINVE+MFM+IT N LR+
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRYARQMDIELFETSAKDNINVEDMFMSITRQVLNYKLRAA 176
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
++++R D + ++ H K G KCC
Sbjct: 177 SDEQQR-----DRIVVKPHKNK-GKSNKCC 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
Query: 1 MGIQLFETSAKDNINVEEMFMAIT----NLVLRSKKEQKERQVLNSDTVNIRKHTTKPGG 56
M I+LFETSAKDNINVE+MFM+IT N LR+ ++++R D + ++ H K G
Sbjct: 142 MDIELFETSAKDNINVEDMFMSITRQVLNYKLRAASDEQQR-----DRIVVKPHKNK-GK 195
Query: 57 KKKVCT 62
K C+
Sbjct: 196 SNKCCS 201
>gi|224071962|ref|XP_002199537.1| PREDICTED: ras-related protein Rab-35 [Taeniopygia guttata]
Length = 201
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP +KVV TEDA +FA QM IQLFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPDRKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLTKNSKR---KKRCC 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + K++ + KK
Sbjct: 142 MEIQLFETSAKENINVEEMFNCITELVLRAKKENLAKQQQQQQNDVVKLTKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+N+NVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPNSKVVETNDAQKFAEQMGISLFETSAKENVNVEEMFNCITELVLRAKKESV 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D + +++++ + KKKCC
Sbjct: 177 AKQQQQQQNDVIKLKQNSKR---KKKCC 201
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+N+NVEEMF IT LVLR+KKE K++Q +D + +++++ + KK
Sbjct: 142 MGISLFETSAKENVNVEEMFNCITELVLRAKKESVAKQQQQQQNDVIKLKQNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 122 LVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCITELVLRAKKEVL 181
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KKKCC
Sbjct: 182 AKQQQQQQNDVVKLTRNSKR---KKKCC 206
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + +++ + KK
Sbjct: 147 MGINLFETSAKENINVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLTRNSKR---KK 203
Query: 59 KVC 61
K C
Sbjct: 204 KCC 206
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP KVV T DAQ+FA QM I+LFETSAK+NINVEEMF IT LVL +KKE
Sbjct: 117 LVGNKNDDPNSKVVETNDAQKFAEQMSIRLFETSAKENINVEEMFNCITELVLWAKKESV 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K+ Q+ +D + + K++ + KKKCC
Sbjct: 177 AKQHQLQQNDVIKLSKNSKR---KKKCC 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M I+LFETSAK+NINVEEMF IT LVL +KKE K+ Q+ +D + + K++ + KK
Sbjct: 142 MSIRLFETSAKENINVEEMFNCITELVLWAKKESVAKQHQLQQNDVIKLSKNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|125812908|ref|XP_001339327.1| PREDICTED: ras-related protein Rab-35-like [Danio rerio]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP KK+V T+DA RF +G++LFETSAK+NINVEEMFMA T++VLR+KK+ +
Sbjct: 118 LVGNKNDDPSKKLVDTQDAMRFGESVGVRLFETSAKENINVEEMFMAFTHMVLRAKKQSQ 177
Query: 152 ERQVLNS----DTVNIRKHTTKPGGK--KKCC 177
R DTV+I H + K KKCC
Sbjct: 178 SRAEREREREKDTVHINSHRDRERRKKGKKCC 209
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS----DTVNIRKHTTKPGG 56
+G++LFETSAK+NINVEEMFMA T++VLR+KK+ + R DTV+I H +
Sbjct: 143 VGVRLFETSAKENINVEEMFMAFTHMVLRAKKQSQSRAEREREREKDTVHINSHRDRERR 202
Query: 57 KK 58
KK
Sbjct: 203 KK 204
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+N+NVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPGSKVVETTDAQKFAEQMGISLFETSAKENVNVEEMFNCITELVLRAKKEVL 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KKKCC
Sbjct: 177 AKQQQQQQNDVVKLTRNSKR---KKKCC 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+N+NVEEMF IT LVLR+KKE K++Q +D V + +++ + KK
Sbjct: 142 MGISLFETSAKENVNVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLTRNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|47199772|emb|CAF87763.1| unnamed protein product [Tetraodon nigroviridis]
Length = 152
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+NINVEEMF IT LVLR+KKE
Sbjct: 68 LVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENINVEEMFNCITELVLRAKKEVL 127
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KKKCC
Sbjct: 128 AKQQQQQQNDVVKLTRNSKR---KKKCC 152
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+NINVEEMF IT LVLR+KKE K++Q +D V + +++ + KK
Sbjct: 93 MGINLFETSAKENINVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLTRNSKR---KK 149
Query: 59 KVC 61
K C
Sbjct: 150 KCC 152
>gi|410922303|ref|XP_003974622.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 201
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+N+NVEEMF IT LVLR+KKE
Sbjct: 117 LVGNKNDDPNSKVVETTDAQKFAEQMGINLFETSAKENLNVEEMFNCITELVLRAKKEVL 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KKKCC
Sbjct: 177 AKQQQQQQNDVVKLTRNSKR---KKKCC 201
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+N+NVEEMF IT LVLR+KKE K++Q +D V + +++ + KK
Sbjct: 142 MGINLFETSAKENLNVEEMFNCITELVLRAKKEVLAKQQQQQQNDVVKLTRNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|195438709|ref|XP_002067275.1| GK16335 [Drosophila willistoni]
gi|194163360|gb|EDW78261.1| GK16335 [Drosophila willistoni]
Length = 200
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+L+ETSAKDNINVE+MF++IT VL K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFARQMDIELYETSAKDNINVEDMFLSITRQVLNHKLRTA 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+Q DT+N++ K KKCC
Sbjct: 177 SNEQQ---KDTINLKHQKNKRS--KKCC 199
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK--KEQKERQVLNSDTVNIRKHTTKPGGKK 58
M I+L+ETSAKDNINVE+MF++IT VL K E+Q DT+N++ K K
Sbjct: 142 MDIELYETSAKDNINVEDMFLSITRQVLNHKLRTASNEQQ---KDTINLKHQKNKRS--K 196
Query: 59 KVCT 62
K C+
Sbjct: 197 KCCS 200
>gi|45360691|ref|NP_989019.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|38174140|gb|AAH61434.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268698|emb|CAJ82712.1| RAB35, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPERKVVETEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLSKNSKR---KKRCC 201
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLSKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|194762836|ref|XP_001963540.1| GF20451 [Drosophila ananassae]
gi|190629199|gb|EDV44616.1| GF20451 [Drosophila ananassae]
Length = 200
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINV+EMF++IT VL+ K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVDEMFLSITRQVLQHKLRTT 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGK-KKCC 177
E+Q DT++++ PG K +KCC
Sbjct: 177 SNEQQ---KDTIHLKN---TPGTKRRKCC 199
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 8/63 (12%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK--KEQKERQVLNSDTVNIRKHTTKPGGKK 58
M I+LFETSAKDNINV+EMF++IT VL+ K E+Q DT++++ PG K+
Sbjct: 142 MDIELFETSAKDNINVDEMFLSITRQVLQHKLRTTSNEQQ---KDTIHLKN---TPGTKR 195
Query: 59 KVC 61
+ C
Sbjct: 196 RKC 198
>gi|126631404|gb|AAI33763.1| RAB35 protein [Xenopus laevis]
Length = 248
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 164 LVGNKNDDPERKVVETEDAFKFAGQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 223
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 224 AKQQQQQQNDVVKLSKNSKR---KKRCC 248
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 189 MDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLSKNSKR---KK 245
Query: 59 KVC 61
+ C
Sbjct: 246 RCC 248
>gi|291230396|ref|XP_002735152.1| PREDICTED: RAB35, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 203
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P++KVV+TEDA+RF+ QMGI+LFETSAKDNINVEEMF AIT LVL K++ +
Sbjct: 117 LVGNKNDCPERKVVVTEDAKRFSEQMGIKLFETSAKDNINVEEMFNAITQLVLNVKRQNQ 176
Query: 152 ERQVLN--SDTVNIRKHTTKPGGKKKC 176
E Q+ N SD + + K++ K K C
Sbjct: 177 E-QLRNRTSDNIKVDKNSKKRHRCKAC 202
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLN--SDTVNIRKHTTK 53
MGI+LFETSAKDNINVEEMF AIT LVL K++ +E Q+ N SD + + K++ K
Sbjct: 142 MGIKLFETSAKDNINVEEMFNAITQLVLNVKRQNQE-QLRNRTSDNIKVDKNSKK 195
>gi|68534613|gb|AAH99268.1| RAB35 protein, partial [Xenopus laevis]
Length = 233
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 149 LVGNKNDDPERKVVETEDAFKFAGQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 208
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 209 AKQQQQQQNDVVKLSKNSKR---KKRCC 233
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 174 MDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLSKNSKR---KK 230
Query: 59 KVC 61
+ C
Sbjct: 231 RCC 233
>gi|27469883|gb|AAH41759.1| RAB35 protein, partial [Xenopus laevis]
Length = 227
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 143 LVGNKNDDPERKVVETEDAFKFAGQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 202
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 203 AKQQQQQQNDVVKLSKNSKR---KKRCC 227
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 168 MDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLSKNSKR---KK 224
Query: 59 KVC 61
+ C
Sbjct: 225 RCC 227
>gi|46249671|gb|AAH68969.1| RAB35 protein, partial [Xenopus laevis]
Length = 231
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP++KVV TEDA +FA QM IQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 147 LVGNKNDDPERKVVETEDAFKFAGQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 206
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 207 AKQQQQQQNDVVKLSKNSKR---KKRCC 231
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M IQLFETSAK+N+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 172 MDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLSKNSKR---KK 228
Query: 59 KVC 61
+ C
Sbjct: 229 RCC 231
>gi|148234955|ref|NP_001079974.1| RAB35, member RAS oncogene family [Xenopus laevis]
gi|34784624|gb|AAH57747.1| MGC69101 protein [Xenopus laevis]
Length = 201
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNKNDDP +KVV TEDA +FA QM I+LFETSAKDN+NVEEMF IT LVLR+KK+
Sbjct: 117 LVGNKNDDPDRKVVETEDAYKFAAQMDIRLFETSAKDNLNVEEMFNCITELVLRAKKDNL 176
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + K++ + KK+CC
Sbjct: 177 AKQQQQQQNDVVKLNKNSKR---KKRCC 201
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIRKHTTKPGGKK 58
M I+LFETSAKDN+NVEEMF IT LVLR+KK+ K++Q +D V + K++ + KK
Sbjct: 142 MDIRLFETSAKDNLNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLNKNSKR---KK 198
Query: 59 KVC 61
+ C
Sbjct: 199 RCC 201
>gi|195131589|ref|XP_002010233.1| GI14806 [Drosophila mojavensis]
gi|193908683|gb|EDW07550.1| GI14806 [Drosophila mojavensis]
Length = 201
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 14/92 (15%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL------R 145
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINVE+MF++IT VL
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFARQMDIELFETSAKDNINVEDMFLSITRQVLDHKLRTA 176
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
S ++QK+R ++ K G KCC
Sbjct: 177 SDEQQKDRIII--------KQNKNKGKSNKCC 200
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVL------RSKKEQKERQVL 40
M I+LFETSAKDNINVE+MF++IT VL S ++QK+R ++
Sbjct: 142 MDIELFETSAKDNINVEDMFLSITRQVLDHKLRTASDEQQKDRIII 187
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNKNDDP KVV T DAQ+FA QMGI LFETSAK+N+NVEEMF IT LVL++KKE
Sbjct: 117 LVGNKNDDPNSKVVETTDAQKFAEQMGISLFETSAKENVNVEEMFNCITELVLKAKKEVL 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K++Q +D V + +++ + KKKCC
Sbjct: 177 AKQQQQQQNDVVKLTRNSKR---KKKCC 201
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE--QKERQVLNSDTVNIRKHTTKPGGKK 58
MGI LFETSAK+N+NVEEMF IT LVL++KKE K++Q +D V + +++ + KK
Sbjct: 142 MGISLFETSAKENVNVEEMFNCITELVLKAKKEVLAKQQQQQQNDVVKLTRNSKR---KK 198
Query: 59 KVC 61
K C
Sbjct: 199 KCC 201
>gi|357380732|pdb|3TW8|B Chain B, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
gi|357380734|pdb|3TW8|D Chain D, Gef Domain Of Dennd 1b In Complex With Rab Gtpase Rab35
Length = 181
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 54/63 (85%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEEMF IT LVLR+KK+
Sbjct: 118 LVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 177
Query: 152 ERQ 154
+Q
Sbjct: 178 AKQ 180
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ 38
MGIQLFETSAK+N+NVEEMF IT LVLR+KK+ +Q
Sbjct: 143 MGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 180
>gi|195394019|ref|XP_002055643.1| GJ19473 [Drosophila virilis]
gi|194150153|gb|EDW65844.1| GJ19473 [Drosophila virilis]
Length = 201
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 16/93 (17%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK---- 147
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDN+NVE+MF++IT VL K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFARQMDIELFETSAKDNLNVEDMFLSITRQVLNHKLRTA 176
Query: 148 --KEQKER-QVLNSDTVNIRKHTTKPGGKKKCC 177
++QK+R QV K + G KCC
Sbjct: 177 SDEQQKDRIQV---------KQSKNKGKTNKCC 200
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 6/43 (13%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK------KEQKER 37
M I+LFETSAKDN+NVE+MF++IT VL K ++QK+R
Sbjct: 142 MDIELFETSAKDNLNVEDMFLSITRQVLNHKLRTASDEQQKDR 184
>gi|347969093|ref|XP_311848.5| AGAP003028-PA [Anopheles gambiae str. PEST]
gi|333467702|gb|EAA07904.5| AGAP003028-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVGNKNDDP +KVV TEDA+RFANQM I+LFETSAKDN+NVEEMF+AIT VLR
Sbjct: 117 LVGNKNDDPTRKVVTTEDAERFANQMEIKLFETSAKDNLNVEEMFLAITEQVLR 170
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLR 29
M I+LFETSAKDN+NVEEMF+AIT VLR
Sbjct: 142 MEIKLFETSAKDNLNVEEMFLAITEQVLR 170
>gi|45360657|ref|NP_989002.1| uncharacterized protein LOC394598 [Xenopus (Silurana) tropicalis]
gi|38174213|gb|AAH61274.1| hypothetical protein MGC75714 [Xenopus (Silurana) tropicalis]
Length = 201
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+DDP +K V DA+RFA+QMG+++FETSAK+N NVEEMF+++T +VLR KK+ +
Sbjct: 118 LVGNKDDDPSRKRVEAADAKRFADQMGVRMFETSAKENRNVEEMFLSVTRMVLRMKKDNQ 177
Query: 152 ERQVLN-SDTVNIRKHTTKPGGKKKCC 177
R LN S+ V I K KP K+CC
Sbjct: 178 AR--LNPSEVVTITKTKKKP-HVKRCC 201
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLN-SDTVNIRKHTTKPGGKK 58
MG+++FETSAK+N NVEEMF+++T +VLR KK+ + R LN S+ V I K KP K+
Sbjct: 143 MGVRMFETSAKENRNVEEMFLSVTRMVLRMKKDNQAR--LNPSEVVTITKTKKKPHVKR 199
>gi|194893325|ref|XP_001977854.1| GG18010 [Drosophila erecta]
gi|195479590|ref|XP_002100946.1| GE17342 [Drosophila yakuba]
gi|190649503|gb|EDV46781.1| GG18010 [Drosophila erecta]
gi|194188470|gb|EDX02054.1| GE17342 [Drosophila yakuba]
Length = 201
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 10/90 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINVE MF++IT VL K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKK--KCC 177
E+Q DT++++ + P G K KCC
Sbjct: 177 PNEQQ---KDTLHLKPN---PKGSKGGKCC 200
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I+LFETSAKDNINVE MF++IT VL K
Sbjct: 142 MDIELFETSAKDNINVENMFLSITRQVLDHK 172
>gi|20129057|ref|NP_608373.1| Rab35, isoform A [Drosophila melanogaster]
gi|320542347|ref|NP_001188678.1| Rab35, isoform B [Drosophila melanogaster]
gi|442617060|ref|NP_001259739.1| Rab35, isoform D [Drosophila melanogaster]
gi|195345901|ref|XP_002039507.1| GM22691 [Drosophila sechellia]
gi|195567823|ref|XP_002107458.1| GD15551 [Drosophila simulans]
gi|7289283|gb|AAF45371.1| Rab35, isoform A [Drosophila melanogaster]
gi|20151577|gb|AAM11148.1| LD21953p [Drosophila melanogaster]
gi|194134733|gb|EDW56249.1| GM22691 [Drosophila sechellia]
gi|194204865|gb|EDX18441.1| GD15551 [Drosophila simulans]
gi|220944822|gb|ACL84954.1| Rab35-PA [synthetic construct]
gi|220954600|gb|ACL89843.1| Rab35-PA [synthetic construct]
gi|318069472|gb|ADV37760.1| Rab35, isoform B [Drosophila melanogaster]
gi|440216975|gb|AGB95578.1| Rab35, isoform D [Drosophila melanogaster]
Length = 201
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 10/90 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINVE MF++IT VL K
Sbjct: 117 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKK--KCC 177
E+Q DT++++ + P G K KCC
Sbjct: 177 PNEQQ---KDTLHLKPN---PKGSKGGKCC 200
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I+LFETSAKDNINVE MF++IT VL K
Sbjct: 142 MDIELFETSAKDNINVENMFLSITRQVLDHK 172
>gi|442617058|ref|NP_001259738.1| Rab35, isoform C [Drosophila melanogaster]
gi|323429945|gb|ADX64759.1| MIP14774p [Drosophila melanogaster]
gi|440216974|gb|AGB95577.1| Rab35, isoform C [Drosophila melanogaster]
Length = 190
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 10/90 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINVE MF++IT VL K
Sbjct: 106 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS 165
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKK--KCC 177
E+Q DT++++ + P G K KCC
Sbjct: 166 PNEQQ---KDTLHLKPN---PKGSKGGKCC 189
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I+LFETSAKDNINVE MF++IT VL K
Sbjct: 131 MDIELFETSAKDNINVENMFLSITRQVLDHK 161
>gi|260803593|ref|XP_002596674.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
gi|229281933|gb|EEN52686.1| hypothetical protein BRAFLDRAFT_122037 [Branchiostoma floridae]
Length = 207
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-Q 150
LVGNKND P++KVV T DAQRFA+QMGI+LFETSAK+NINVEEMF IT VL KKE Q
Sbjct: 117 LVGNKNDCPERKVVETGDAQRFADQMGIKLFETSAKENINVEEMFNEITRQVLHQKKETQ 176
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ ++T+ + KH G K++ C
Sbjct: 177 AKLAAQTNETIKLDKH---KGHKRRRC 200
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 10/73 (13%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-QKERQVLNSDTVNIRKHTTKPGGKKK 59
MGI+LFETSAK+NINVEEMF IT VL KKE Q + ++T+ + KH G K++
Sbjct: 142 MGIKLFETSAKENINVEEMFNEITRQVLHQKKETQAKLAAQTNETIKLDKH---KGHKRR 198
Query: 60 VCTVLNECAWLGC 72
C +GC
Sbjct: 199 ------RCGAVGC 205
>gi|16769388|gb|AAL28913.1| LD28840p [Drosophila melanogaster]
Length = 147
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 64/90 (71%), Gaps = 10/90 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP +KVV+TEDAQRFA QM I+LFETSAKDNINVE MF++IT VL K
Sbjct: 63 LVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS 122
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKK--KCC 177
E+Q DT++++ + P G K KCC
Sbjct: 123 PNEQQ---KDTLHLKPN---PKGSKGGKCC 146
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I+LFETSAKDNINVE MF++IT VL K
Sbjct: 88 MDIELFETSAKDNINVENMFLSITRQVLDHK 118
>gi|225713348|gb|ACO12520.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
gi|225713898|gb|ACO12795.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
gi|290561314|gb|ADD38059.1| Ras-related protein Rab-35 [Lepeophtheirus salmonis]
Length = 223
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNKND D KKVVLTEDA+RF++QMGI+LFETSAK+N NVEEMF ++T LVL+SKKE
Sbjct: 120 LVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLFETSAKENFNVEEMFKSLTELVLKSKKE 178
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 33
MGI+LFETSAK+N NVEEMF ++T LVL+SKKE
Sbjct: 146 MGIRLFETSAKENFNVEEMFKSLTELVLKSKKE 178
>gi|195163365|ref|XP_002022521.1| GL12921 [Drosophila persimilis]
gi|194104513|gb|EDW26556.1| GL12921 [Drosophila persimilis]
Length = 200
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP KVV+TEDAQRFA QM I+L+ETSAKDNINV+ MF++IT VL K
Sbjct: 117 LVGNKNDDPDCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLNHKLRTT 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGK-KKCC 177
E+Q DT++++ + PG K +KCC
Sbjct: 177 TNEQQ---KDTIHLKNN---PGTKRRKCC 199
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK--KEQKERQVLNSDTVNIRKHTTKPGGKK 58
M I+L+ETSAKDNINV+ MF++IT VL K E+Q DT++++ + PG K+
Sbjct: 142 MDIELYETSAKDNINVDNMFLSITRQVLNHKLRTTTNEQQ---KDTIHLKNN---PGTKR 195
Query: 59 KVC 61
+ C
Sbjct: 196 RKC 198
>gi|223649372|gb|ACN11444.1| Ras-related protein Rab-35 [Salmo salar]
Length = 211
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP KK V ++DA RF +G+++FETSAK+NINVEEMFMA T++VLR+KK+ +
Sbjct: 120 LVGNKNDDPSKKQVDSQDAMRFGESVGVRVFETSAKENINVEEMFMAFTHMVLRTKKQSQ 179
Query: 152 E----RQVLNSDTVNIRKHTTKPGGK--KKCC 177
+ +TV+I H + K KKCC
Sbjct: 180 SRAEREREREKETVDINSHRHRERRKRGKKCC 211
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 33/35 (94%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 35
+G+++FETSAK+NINVEEMFMA T++VLR+KK+ +
Sbjct: 145 VGVRVFETSAKENINVEEMFMAFTHMVLRTKKQSQ 179
>gi|432867381|ref|XP_004071163.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 208
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKN+DP KK V T+DA RF +G+++FETSAK NINVEEMFMA T++VL +KK+ +
Sbjct: 118 LVGNKNEDPTKKKVETQDAVRFGESVGVRVFETSAKANINVEEMFMAFTHMVLNAKKQSQ 177
Query: 152 ---ERQVLNSDTVNI---RKHTTKPGGKKKCC 177
ER+ DTVN R H + KKCC
Sbjct: 178 SRAERERERDDTVNFNAKRDHDRRKRA-KKCC 208
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 6/64 (9%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK---ERQVLNSDTVNI---RKHTTKP 54
+G+++FETSAK NINVEEMFMA T++VL +KK+ + ER+ DTVN R H +
Sbjct: 143 VGVRVFETSAKANINVEEMFMAFTHMVLNAKKQSQSRAERERERDDTVNFNAKRDHDRRK 202
Query: 55 GGKK 58
KK
Sbjct: 203 RAKK 206
>gi|125981885|ref|XP_001354946.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
gi|54643258|gb|EAL32002.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK--KE 149
LVGNKNDDP KVV+TEDAQRFA QM I+L+ETSAKDNINV+ MF++IT VL K
Sbjct: 117 LVGNKNDDPDCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLNHKLRTT 176
Query: 150 QKERQVLNSDTVNIRKHTTKPGGK-KKCC 177
E+Q DT++++ + PG K +KCC
Sbjct: 177 TNEQQ---KDTIHLKNN---PGTKRRKCC 199
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK--KEQKERQVLNSDTVNIRKHTTKPGGKK 58
M I+L+ETSAKDNINV+ MF++IT VL K E+Q DT++++ + PG K+
Sbjct: 142 MDIELYETSAKDNINVDNMFLSITRQVLNHKLRTTTNEQQ---KDTIHLKNN---PGTKR 195
Query: 59 KVC 61
+ C
Sbjct: 196 RKC 198
>gi|89258441|gb|ABD65444.1| Rab35 [Suberites domuncula]
Length = 200
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 53/58 (91%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNKND P++KVV TEDA +FA+Q+GIQLFETSAK+N+NVEE+F AIT LVL++KK+
Sbjct: 117 LVGNKNDCPERKVVQTEDATKFADQIGIQLFETSAKENLNVEEVFYAITRLVLQTKKD 174
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 33
+GIQLFETSAK+N+NVEE+F AIT LVL++KK+
Sbjct: 142 IGIQLFETSAKENLNVEEVFYAITRLVLQTKKD 174
>gi|115728606|ref|XP_780763.2| PREDICTED: ras-related protein Rab-35-like [Strongylocentrotus
purpuratus]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P++KVV TEDAQ+FA QM IQL+ETSAK+NINVEEMF IT LVL+ K E +
Sbjct: 117 LVGNKNDAPERKVVETEDAQKFAEQMNIQLYETSAKENINVEEMFNGITALVLKQKLENQ 176
Query: 152 ER 153
+
Sbjct: 177 AK 178
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKER 37
M IQL+ETSAK+NINVEEMF IT LVL+ K E + +
Sbjct: 142 MNIQLYETSAKENINVEEMFNGITALVLKQKLENQAK 178
>gi|348510173|ref|XP_003442620.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 209
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP KK V T+DA RF +G+++FETSAK+NINVEEMFMA T +VLR+KKE +
Sbjct: 118 LVGNKNDDPSKKQVDTQDALRFGESVGVRVFETSAKENINVEEMFMAFTLMVLRAKKESQ 177
Query: 152 ERQVLNS----DTVNI 163
R DTVNI
Sbjct: 178 NRVEREREREKDTVNI 193
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS----DTVNI 47
+G+++FETSAK+NINVEEMFMA T +VLR+KKE + R DTVNI
Sbjct: 143 VGVRVFETSAKENINVEEMFMAFTLMVLRAKKESQNRVEREREREKDTVNI 193
>gi|47217979|emb|CAG02262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP KK V ++DA RF +G+++FETSAK+NINVEEMFMA T++VLR+KK+ +
Sbjct: 115 LVGNKNDDPAKKRVDSQDAVRFGETVGVRVFETSAKENINVEEMFMAFTHMVLRAKKQSQ 174
Query: 152 ERQVLNS----DTVNI 163
R DTVNI
Sbjct: 175 SRAEREREREKDTVNI 190
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS----DTVNI 47
+G+++FETSAK+NINVEEMFMA T++VLR+KK+ + R DTVNI
Sbjct: 140 VGVRVFETSAKENINVEEMFMAFTHMVLRAKKQSQSRAEREREREKDTVNI 190
>gi|339243317|ref|XP_003377584.1| GTP-binding protein YPTM2 [Trichinella spiralis]
gi|316973604|gb|EFV57171.1| GTP-binding protein YPTM2 [Trichinella spiralis]
Length = 134
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D+ +++VVL DA RFA Q ++ FETSAK+N+NVEEMF IT LVL++K Q
Sbjct: 49 LVGNKCDERERRVVLEHDAYRFAEQTNVKYFETSAKENVNVEEMFNCITRLVLQAKNSQ- 107
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ Q NS + NIR K+KCC
Sbjct: 108 QWQEANSKSANIRLDKASLKRKRKCC 133
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVCT 62
++ FETSAK+N+NVEEMF IT LVL++K Q + Q NS + NIR K+K C+
Sbjct: 76 VKYFETSAKENVNVEEMFNCITRLVLQAKNSQ-QWQEANSKSANIRLDKASLKRKRKCCS 134
>gi|410927045|ref|XP_003976978.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 209
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKNDDP +K V ++DA F +G+++FETSAK+NINVEEMFMA T++VLR+KK+ +
Sbjct: 118 LVGNKNDDPARKRVDSQDAAHFGESVGVRVFETSAKENINVEEMFMAFTHMVLRAKKQSQ 177
Query: 152 ERQVLNS----DTVNI 163
R DTVNI
Sbjct: 178 NRAEREREREKDTVNI 193
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS----DTVNI 47
+G+++FETSAK+NINVEEMFMA T++VLR+KK+ + R DTVNI
Sbjct: 143 VGVRVFETSAKENINVEEMFMAFTHMVLRAKKQSQNRAEREREREKDTVNI 193
>gi|327286070|ref|XP_003227754.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
Length = 185
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK +DP +K V T DA+RF++QMG++LFETSAK+N+NVEEMF AIT +VLR+K+E
Sbjct: 101 LVGNKCEDPSRKQVETADARRFSDQMGVRLFETSAKENLNVEEMFNAITAMVLRTKQENL 160
Query: 152 ERQVLNSDTVNI 163
R ++ V I
Sbjct: 161 ARLQQQNEVVKI 172
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNI 47
MG++LFETSAK+N+NVEEMF AIT +VLR+K+E R ++ V I
Sbjct: 126 MGVRLFETSAKENLNVEEMFNAITAMVLRTKQENLARLQQQNEVVKI 172
>gi|156393953|ref|XP_001636591.1| predicted protein [Nematostella vectensis]
gi|156223696|gb|EDO44528.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D P KKVV T D Q+F QM I++FETSAK+NINVEE+F +IT LVL KK +
Sbjct: 117 LVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSAKENINVEEIFSSITKLVLEKKKADQ 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q TV + K + G++K C
Sbjct: 177 VKQSAEKGTVKVGKDNKR--GRRKFC 200
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
M I++FETSAK+NINVEE+F +IT LVL KK + +Q TV + K + G++K
Sbjct: 142 MNIRVFETSAKENINVEEIFSSITKLVLEKKKADQVKQSAEKGTVKVGKDNKR--GRRKF 199
Query: 61 C 61
C
Sbjct: 200 C 200
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK DDP+++VVL DA+RFA M I FETSAK+NINVEEMF IT LVL +K
Sbjct: 122 LVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLVLEAKLRAP 181
Query: 152 ERQVLNSDT-VNIRKHTTKPGGKKKCC 177
+ + +S + V + + K+KCC
Sbjct: 182 QTNIADSGSGVRLGGSILRRHEKRKCC 208
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDT-VNIRKHTTKPGGKKK 59
M I FETSAK+NINVEEMF IT LVL +K + + +S + V + + K+K
Sbjct: 147 MKIPFFETSAKENINVEEMFNCITRLVLEAKLRAPQTNIADSGSGVRLGGSILRRHEKRK 206
Query: 60 VCT 62
C+
Sbjct: 207 CCS 209
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK DDP+++VVL DA+RFA M I FETSAK+NINVEEMF IT LVL +K
Sbjct: 149 LVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLVLEAKLRAP 208
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
+ + +S V + + + K+KCC
Sbjct: 209 QPNIADSGGGVRLGGSSLRRHEKRKCC 235
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
M I FETSAK+NINVEEMF IT LVL +K + + +S V + + + K+K
Sbjct: 174 MKIPFFETSAKENINVEEMFNCITRLVLEAKLRAPQPNIADSGGGVRLGGSSLRRHEKRK 233
Query: 60 VCT 62
C+
Sbjct: 234 CCS 236
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK DDP+++VVL DA+RFA M I FETSAK+NINVEEMF IT LVL +K
Sbjct: 122 LVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLVLEAKLRAP 181
Query: 152 ERQVLNS-DTVNIRKHTTKPGGKKKCC 177
+ + +S V + + + K+KCC
Sbjct: 182 QPNIADSGGGVRLGGSSLRRHEKRKCC 208
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKK 59
M I FETSAK+NINVEEMF IT LVL +K + + +S V + + + K+K
Sbjct: 147 MKIPFFETSAKENINVEEMFNCITRLVLEAKLRAPQPNIADSGGGVRLGGSSLRRHEKRK 206
Query: 60 VCT 62
C+
Sbjct: 207 CCS 209
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK DDP+++VVL DA+RFA M I FETSAK+NINVEEMF IT LVL +K
Sbjct: 122 LVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLVLEAKLRAP 181
Query: 152 ERQVLNSDT-VNIRKHTTKPGGKKKCC 177
+ + +S + V + + K+KCC
Sbjct: 182 QTNIGDSGSGVRLGGSILRRHEKRKCC 208
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDT-VNIRKHTTKPGGKKK 59
M I FETSAK+NINVEEMF IT LVL +K + + +S + V + + K+K
Sbjct: 147 MKIPFFETSAKENINVEEMFNCITRLVLEAKLRAPQTNIGDSGSGVRLGGSILRRHEKRK 206
Query: 60 VCT 62
C+
Sbjct: 207 CCS 209
>gi|221116505|ref|XP_002158899.1| PREDICTED: ras-related protein Rab-35-like [Hydra magnipapillata]
Length = 203
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND + KVV T+DA+ FA QMG+++FETSAKDN+N+E++F IT +VLRSK+EQ+
Sbjct: 117 LVGNKNDCLKNKVVDTQDAKTFAAQMGVEVFETSAKDNLNIEQVFSHITAMVLRSKREQQ 176
Query: 152 ER 153
+
Sbjct: 177 SK 178
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 33/37 (89%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKER 37
MG+++FETSAKDN+N+E++F IT +VLRSK+EQ+ +
Sbjct: 142 MGVEVFETSAKDNLNIEQVFSHITAMVLRSKREQQSK 178
>gi|387017964|gb|AFJ51100.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 202
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK +D +K V T DA+RF+ QMG++LFETSAK+N+NVEEMF AIT +VLR+K+E
Sbjct: 118 LVGNKCEDLSRKQVETADARRFSEQMGVRLFETSAKENLNVEEMFNAITTMVLRTKQENL 177
Query: 152 ERQVLNSDTVNI 163
R+ ++ V I
Sbjct: 178 ARRQQQNEVVKI 189
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNI 47
MG++LFETSAK+N+NVEEMF AIT +VLR+K+E R+ ++ V I
Sbjct: 143 MGVRLFETSAKENLNVEEMFNAITTMVLRTKQENLARRQQQNEVVKI 189
>gi|196010960|ref|XP_002115344.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
gi|190582115|gb|EDV22189.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
Length = 207
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-- 149
LVGNK D KK+V T DA++FA QMGIQLFE SAKDNIN+E++F AIT LVL++K E
Sbjct: 118 LVGNKCDCLDKKLVSTADAKKFAEQMGIQLFEASAKDNINIEDVFTAITKLVLKTKMEAS 177
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKC 176
K +S + + K K K KC
Sbjct: 178 AKASDPNSSSAIKVNKIGNKKKSKVKC 204
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKK 59
MGIQLFE SAKDNIN+E++F AIT LVL++K E + + + I+ K G KKK
Sbjct: 143 MGIQLFEASAKDNINIEDVFTAITKLVLKTKMEASAKASDPNSSSAIK--VNKIGNKKK 199
>gi|324519987|gb|ADY47533.1| Ras-related protein Rab-35 [Ascaris suum]
Length = 205
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 14/92 (15%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK DDP+++VVL DA+RFA+ M I FETSAK+N+NVEEMF IT LVL +K
Sbjct: 122 LVGNKADDPERRVVLEADARRFADTMHIPFFETSAKENVNVEEMFNCITGLVLDAK---- 177
Query: 152 ERQVLNSDTVNIRKHTTKPGG------KKKCC 177
L S + GG KKKCC
Sbjct: 178 ----LRSPQAAAGDKGVRLGGSPRRQEKKKCC 205
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I FETSAK+N+NVEEMF IT LVL +K
Sbjct: 147 MHIPFFETSAKENVNVEEMFNCITGLVLDAK 177
>gi|431914260|gb|ELK15518.1| Ras-related protein Rab-35 [Pteropus alecto]
Length = 258
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEM-FMAITNLVLRSKKEQ 150
LVGNKNDDP++KVV TEDA +FA QMGIQLFETSAK+N+NVEE+ F+ + L +
Sbjct: 107 LVGNKNDDPERKVVETEDAYKFAAQMGIQLFETSAKENVNVEEVAFLWLPEL----GRAP 162
Query: 151 KERQVLNSDTVNIRK----HTTKPGGKK 174
++D +++R+ H+ P G++
Sbjct: 163 AVGCTPHADRLSLRRGMSLHSAGPSGEQ 190
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 1 MGIQLFETSAKDNINVEEM-FMAITNLVLRSKKEQKERQVLNSDTVNIRK----HTTKPG 55
MGIQLFETSAK+N+NVEE+ F+ + L + ++D +++R+ H+ P
Sbjct: 132 MGIQLFETSAKENVNVEEVAFLWLPEL----GRAPAVGCTPHADRLSLRRGMSLHSAGPS 187
Query: 56 GKK 58
G++
Sbjct: 188 GEQ 190
>gi|198430272|ref|XP_002128387.1| PREDICTED: similar to Rab35 [Ciona intestinalis]
Length = 203
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK-EQ 150
LVGNK+D +KKVV T DA++F++Q+ I LFETSAK+N N+EEMF IT VLR+K+ Q
Sbjct: 117 LVGNKDDCAEKKVVETADAKKFSDQINITLFETSAKENKNIEEMFTEITRQVLRTKQNSQ 176
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ D + +R KP CC
Sbjct: 177 NQSGAGQPDGLKLRDKRNKPKKSSGCC 203
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKK-EQKERQVLNSDTVNIRKHTTKP 54
+ I LFETSAK+N N+EEMF IT VLR+K+ Q + D + +R KP
Sbjct: 142 INITLFETSAKENKNIEEMFTEITRQVLRTKQNSQNQSGAGQPDGLKLRDKRNKP 196
>gi|326667537|ref|XP_001334079.4| PREDICTED: ras-related protein Rab-35-like, partial [Danio rerio]
Length = 182
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNL 142
LVGNKNDDP KVV T DAQ+FA QMGI+LFETSAK+N+NVE++ +A+ L
Sbjct: 117 LVGNKNDDPASKVVETNDAQKFAEQMGIRLFETSAKENLNVEDVSLALQRL 167
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNL 26
MGI+LFETSAK+N+NVE++ +A+ L
Sbjct: 142 MGIRLFETSAKENLNVEDVSLALQRL 167
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D +VV E A+ FA+++GI ETSAKD NVE+ FMA+T+ + Q
Sbjct: 118 LVGNKSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQP 177
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
TVNIR + T+ GG CC
Sbjct: 178 ANNSAKPPTVNIRGQPVTQSGG---CC 201
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIR-KHTTKPGG 56
+GI ETSAKD NVE+ FMA+T+ + Q TVNIR + T+ GG
Sbjct: 143 IGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNSAKPPTVNIRGQPVTQSGG 199
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +VV E A+ FA+++GI ETSAKD NVE+ FMA+T + Q
Sbjct: 118 LVGNKADLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQP 177
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
TVNIR + T+ GG CC
Sbjct: 178 ASNSAKPPTVNIRGQPVTQSGG---CC 201
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIR-KHTTKPGG 56
+GI ETSAKD NVE+ FMA+T + Q TVNIR + T+ GG
Sbjct: 143 IGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNSAKPPTVNIRGQPVTQSGG 199
>gi|89257549|gb|ABD65039.1| GTP-binding protein, putative [Brassica oleracea]
Length = 189
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNKND +KVV TE AQ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 105 LVGNKNDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAI 156
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNKND +KVV TE AQ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 118 LVGNKNDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>gi|17555956|ref|NP_499454.1| Protein RAB-35 [Caenorhabditis elegans]
gi|6018411|emb|CAB57899.1| Protein RAB-35 [Caenorhabditis elegans]
Length = 209
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK---K 148
LVGNK ++ +++VVL DA+ +A M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 119 LVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLANP 178
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ + + V+++ ++ KKKC
Sbjct: 179 QSASKDQSRTGGVSLKDNSGSTNQKKKC 206
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 144 MNISFFETSAKEDKNVEPMFTCITSLVLTAK 174
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV TE A+ FA++MGI ETSAK+ INVE+ FMA+ + K
Sbjct: 187 LVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASI-------K 239
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R N R T + G K CC
Sbjct: 240 DRMASQPAAANARPATVQIRGQPVNQKTSCC 270
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + K
Sbjct: 1088 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSK 1147
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q S VNI GG K CC
Sbjct: 1148 AEQA-GSQGVNIDNQNGGAGGSLGKSCC 1174
>gi|268572557|ref|XP_002641352.1| C. briggsae CBR-RAB-35 protein [Caenorhabditis briggsae]
Length = 209
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK---K 148
LVGNK ++ ++VVL DA+ +A M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 119 LVGNKCEETDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITSLVLTAKLANP 178
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ S V+++ + KKKC
Sbjct: 179 SSASKDQHRSGGVSLKDTSGSNNQKKKC 206
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 144 MNIAFFETSAKEDKNVEPMFTCITSLVLTAK 174
>gi|308483958|ref|XP_003104180.1| CRE-RAB-35 protein [Caenorhabditis remanei]
gi|308258488|gb|EFP02441.1| CRE-RAB-35 protein [Caenorhabditis remanei]
Length = 209
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK---K 148
LVGNK ++ ++VVL DA+ +A M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 119 LVGNKCEESDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITSLVLTAKLANP 178
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ S V+++ + KKKC
Sbjct: 179 SSASKDQHRSGGVSLKDNFGNTNQKKKC 206
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 144 MNIAFFETSAKEDKNVEPMFTCITSLVLTAK 174
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV TE A+ FA++MGI ETSAK+ INVE+ FMA+ + K
Sbjct: 118 LVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASI-------K 170
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R N R T + G K CC
Sbjct: 171 DRMASQPAAANARPATVQIRGQPVNQKTSCC 201
>gi|8809602|dbj|BAA97153.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
Length = 159
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNKND +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 75 LVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 126
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV TE A+ FA++MGI ETSAK+ INVE+ FMA+ + K
Sbjct: 122 LVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASI-------K 174
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R N R T + G K CC
Sbjct: 175 DRMASQPAAANARPATVQIRGQPVNQKTSCC 205
>gi|410918321|ref|XP_003972634.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 221
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNK D +++ V TEDAQR A ++G + FE SAKDNINV+E+F ++ + + KE
Sbjct: 134 LVGNKADLEEERQVPTEDAQRLATELGFRFFEASAKDNINVKEVFDSLVDAICEKMKE 191
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 33
+G + FE SAKDNINV+E+F ++ + + KE
Sbjct: 159 LGFRFFEASAKDNINVKEVFDSLVDAICEKMKE 191
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T ++++ +
Sbjct: 118 LVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMT-AAIKTRMASQ 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + CC
Sbjct: 177 PAGGAKPPTVQIRGQPVNQ--QSGCC 200
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KKVV TE A+ FA+ +GI ETSA D+ NVEE F+ +T + S +Q+
Sbjct: 118 LVGNKNDLTDKKVVDTEVAKEFADSIGIPFIETSALDSSNVEEAFLIMTKQIKESVAKQQ 177
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
+ D N+ K + G CC
Sbjct: 178 KDNGRAEDKSNVNLKGQSLTGSNGGCC 204
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D +VV + A+ FA+Q+GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR G K CC
Sbjct: 178 SANNAKPPTVQIRGQPV--GQKSGCC 201
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+GI ETSAKD NVE+ FMA++ + Q TV IR +P G+K
Sbjct: 143 IGIPFMETSAKDATNVEDAFMAMSAAIKNRMASQPSANNAKPPTVQIRG---QPVGQKSG 199
Query: 61 C 61
C
Sbjct: 200 C 200
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VVL ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK NINVE+ F +I +++ E
Sbjct: 125 LVGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKRLSET 184
Query: 151 KERQVLNSDTVNIRKHTTKPG---GKKKCC 177
R + T+N P K +CC
Sbjct: 185 DFRPAPQTITINNPNTAEGPASASSKSRCC 214
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVN 46
GI+ FETSAK NINVE+ F +I +++ E R + T+N
Sbjct: 151 YGIKFFETSAKTNINVEQAFFSIAKDIMKRLSETDFRPAPQTITIN 196
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
L+GNK D KKV+ T Q A++ GI+ FETSAK+NINVE+ F I V+ +EQ
Sbjct: 124 LIGNKCDMLDKKVIETARGQALADEFGIKFFETSAKNNINVEKAFTEIARDVMVRLREQE 183
Query: 151 -KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K+ DT+++ + GKK CC
Sbjct: 184 AKDGGKKGGDTLDLASGGKQ--GKKGCC 209
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 16/58 (27%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKK 58
GI+ FETSAK+NINVE+ F I V+ V +R+ K GGKK
Sbjct: 149 FGIKFFETSAKNNINVEKAFTEIARDVM----------------VRLREQEAKDGGKK 190
>gi|47212241|emb|CAF95016.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++ V TEDAQR A ++G Q FE SAKDN+NV+E+F ++ + +
Sbjct: 161 LVGNKVDLEEERQVPTEDAQRLATELGFQFFEASAKDNVNVKEVFDSLVDAI 212
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G Q FE SAKDN+NV+E+F ++ + +
Sbjct: 186 LGFQFFEASAKDNVNVKEVFDSLVDAI 212
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + +VV T AQ +A+++GI ETSAKD+INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAESRVVDTSVAQAYADEIGIPFLETSAKDSINVEEAFLAMSEAIKKSK 173
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAKD+INVEE F+A++ + +SK
Sbjct: 143 IGIPFLETSAKDSINVEEAFLAMSEAIKKSK 173
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV T ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q AN++GI E SAK NINVEE F+ + + + +
Sbjct: 120 LIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAFLLLARDIKKRIMDSS 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ VN+ + ++ GG KCC
Sbjct: 180 SGEKNQPGVVNVNETSSAAGG--KCC 203
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D P+KKVV + + A++ GI+ ETSAK++INVEE F+++ K+ K
Sbjct: 128 LIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLA-------KDIK 180
Query: 152 ERQV-----LNSDTVNIRKHTTKPGGKKKCC 177
+R + N+ T N + T P +K CC
Sbjct: 181 KRMIDTPNEPNNQTGNAQLSDTAPAKQKNCC 211
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GIQ FETSAK N+NVE++F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIARDIKQRLSEA 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +N + G+K C
Sbjct: 185 DSKPEGGTIKINTEGDASAAAGQKSAC 211
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
GIQ FETSAK N+NVE++F +I + + E + + +N + G+K
Sbjct: 151 YGIQFFETSAKTNMNVEQVFFSIARDIKQRLSEADSKPEGGTIKINTEGDASAAAGQKSA 210
Query: 61 C 61
C
Sbjct: 211 C 211
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + K
Sbjct: 120 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q S VNI GG K CC
Sbjct: 180 AEQA-GSQGVNIDNQNGGAGGSLGKSCC 206
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV TE A+ FA++MGI ETSAK+ NVE+ FMA+ + K
Sbjct: 118 LVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASI-------K 170
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R N R T + G K CC
Sbjct: 171 DRMASQPAAANARPATVQIRGQPVNQKTSCC 201
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D +VV + A+ FA+Q+GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDMTTNRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSTAIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
V+I+ P K CC
Sbjct: 178 SANNAKPPIVHIKGQPVGP--KSGCC 201
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F ++ + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASAIKKGMDTSK 179
Query: 152 ERQVLNSDTVNIRKH--TTKPGGKKKCC 177
QV S VNI H T KCC
Sbjct: 180 SEQV-GSQGVNIDHHGSGTSGSTGGKCC 206
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKH 50
+GI E SAK+NIN+E+ F ++ + + + K QV S VNI H
Sbjct: 145 LGIPFLEVSAKNNINIEKAFYSLASAIKKGMDTSKSEQV-GSQGVNIDHH 193
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D + KVV + A+ +A +GI ETSAK+ NVEE F+ + + ++R+++ +
Sbjct: 119 LIGNKSD-REDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARA 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
QV NS TVN+ + KCC
Sbjct: 178 ATQVDNS-TVNLGGGGSSASSSSKCC 202
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+GI ETSAK+ NVEE F+ + + ++R+++ + QV NS TVN+ + K
Sbjct: 143 LGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS-TVNLGGGGSSASSSSKC 201
Query: 61 C 61
C
Sbjct: 202 C 202
>gi|417397335|gb|JAA45701.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 219
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VVL ED QR AN +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVLAEDGQRLANDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 178 EP---NSENVDISSGSGVTGWKSKCC 200
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I + G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGSGVTGWKSKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKE 149
LVGNK D D K+ V Q A++ GIQ FETSAK NI V+E+F +I +++LR +
Sbjct: 121 LVGNKCDMDESKRRVPYSQGQALADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDS 180
Query: 150 QKERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q + S + N+ +T K K CC
Sbjct: 181 QTDSPSAGSGSGNVHLSSTTASAKQSKGCC 210
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKK 58
GIQ FETSAK NI V+E+F +I +++LR + Q + S + N+ +T K+
Sbjct: 147 FGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDSQTDSPSAGSGSGNVHLSSTTASAKQ 205
>gi|326470301|gb|EGD94310.1| GTP-binding protein [Trichophyton tonsurans CBS 112818]
Length = 145
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + K
Sbjct: 59 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSK 118
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q S VNI GG K CC
Sbjct: 119 AEQA-GSQGVNIDNQNGGAGGSLGKSCC 145
>gi|67471550|ref|XP_651723.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56468513|gb|EAL46354.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790100|dbj|BAD82846.1| small GTPase EhRabM3 [Entamoeba histolytica]
gi|407039932|gb|EKE39904.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449707642|gb|EMD47272.1| small GTPase EhRabM3, putative [Entamoeba histolytica KU27]
Length = 204
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 81 IYCWLFPSGLR--LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFM 137
+YC P G++ LVGNK D + + V T + Q+FA++ G FETSAK NI VEE F
Sbjct: 107 MYC---PQGVKIVLVGNKVDLENDARAVTTAEGQQFASEGGYAFFETSAKMNIKVEEAFR 163
Query: 138 AITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKKCC 177
+ +++++ + +S D V I + P KK CC
Sbjct: 164 ELVTRIVQAEHANPAQVAQSSQDRVQITAQKSTPEEKKSCC 204
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKKV 60
G FETSAK NI VEE F + +++++ + +S D V I + P KK
Sbjct: 144 GYAFFETSAKMNIKVEEAFRELVTRIVQAEHANPAQVAQSSQDRVQITAQKSTPEEKKSC 203
Query: 61 C 61
C
Sbjct: 204 C 204
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV E A+ FA+++GI ETSAK+ +NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + K CC
Sbjct: 178 AANNARPATVQIRGQPVEQ--KASCC 201
>gi|417407681|gb|JAA50441.1| Putative gtpase rab3 small g protein superfamily, partial [Desmodus
rotundus]
Length = 103
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VVL ED QR AN +G + FE SAK+NINV+++F + +++ E
Sbjct: 16 LVGNKCDLEDERVVLAEDGQRLANDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 75
Query: 152 E 152
E
Sbjct: 76 E 76
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINV++ F ++ + + + K
Sbjct: 120 LIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q + VNI +H G KCC
Sbjct: 180 SEQA-GTQGVNIDQHNAGSNGNLGGKCC 206
>gi|403273042|ref|XP_003928337.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
Length = 221
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + G++ FETSAK NIN+E+ F+ + +LR +K
Sbjct: 140 LLGNKCDMDDKRVVPKRKGEQIAREHGVRFFETSAKANINIEKAFLTLAEDILRKTPVKK 199
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
NS+ V+I G K KCC
Sbjct: 200 P----NSENVDISSGGGVTGWKSKCC 221
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
G++ FETSAK NIN+E+ F+ + +LR +K NS+ V+I G K K C
Sbjct: 166 GVRFFETSAKANINIEKAFLTLAEDILRKTPVKKP----NSENVDISSGGGVTGWKSKCC 221
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V TE Q AN+ GI+ FETSAK N+NVE++F I + R E
Sbjct: 125 LVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRRLAET 184
Query: 151 KER---QVLNSDTVNIRKHTTKPGGKKKCC 177
R +N+ ++ K K CC
Sbjct: 185 DSRPEPPRINNIVLDPSKDQGSDKAKSTCC 214
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKER 37
GI+ FETSAK N+NVE++F I + R E R
Sbjct: 151 FGIKFFETSAKTNLNVEKVFFTIAGDIKRRLAETDSR 187
>gi|224054094|ref|XP_002191412.1| PREDICTED: ras-related protein Rab-17 [Taeniopygia guttata]
Length = 213
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ LVGNK D ++ V TE+ + FA G+ ETSAK N V ++FMAI +LR +KE
Sbjct: 127 IALVGNKTDLAAEREVTTEEGEDFARTKGLLFMETSAKSNHQVNDLFMAIVQELLRREKE 186
Query: 150 QKERQVLNSD-TVNIRKHTTKPGGKKKCC 177
+ + + TV++R +T G CC
Sbjct: 187 KASKPSPHGKVTVDLRASSTSTG----CC 211
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSD-TVNIRKHTTKPG 55
G+ ETSAK N V ++FMAI +LR +KE+ + + TV++R +T G
Sbjct: 155 GLLFMETSAKSNHQVNDLFMAIVQELLRREKEKASKPSPHGKVTVDLRASSTSTG 209
>gi|301070251|gb|ADK55544.1| RAB10, member RAS oncogene family [Zonotrichia albicollis]
Length = 157
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 76 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 134
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 135 EP---NSENVDISSGSGVTGWKSKCC 157
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I + G K K C
Sbjct: 102 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGSGVTGWKSKCC 157
>gi|167384745|ref|XP_001737084.1| GTP-binding protein yptV2 [Entamoeba dispar SAW760]
gi|165900296|gb|EDR26644.1| GTP-binding protein yptV2, putative [Entamoeba dispar SAW760]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 81 IYCWLFPSGLR--LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFM 137
+YC P G++ LVGNK D + + V T + Q+FA++ G FETSAK NI VEE F
Sbjct: 107 MYC---PQGVKIVLVGNKVDLENDARAVTTAEGQQFASEGGYAFFETSAKLNIKVEEAFR 163
Query: 138 AITNLVLRSKKEQKERQVLNS-DTVNIRKHTTKPGGKKKCC 177
+ +++++ + +S D V I + P KK CC
Sbjct: 164 ELVTRIVQAEHTNPAQVAQSSQDRVQITTQKSTPEEKKSCC 204
>gi|313236131|emb|CBY11455.1| unnamed protein product [Oikopleura dioica]
Length = 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D P +VV DA+ +A Q I+ FETSAK NI VEEMF IT L K
Sbjct: 98 LVGNKVDSP-NRVVEKNDAEMYAQQQNIKYFETSAKSNIGVEEMFTEITRQALHQKV--- 153
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q + IR + + KK CC
Sbjct: 154 --QSSAPASEPIRLNNQQQKSKKPCC 177
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSK 31
I+ FETSAK NI VEEMF IT L K
Sbjct: 124 IKYFETSAKSNIGVEEMFTEITRQALHQK 152
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV TE AQ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 ASNNARPPTVQIRGQPVNQ--KSGCC 201
>gi|302507522|ref|XP_003015722.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
gi|291179290|gb|EFE35077.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
Length = 425
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + K
Sbjct: 339 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSK 398
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q S VNI GG K CC
Sbjct: 399 AEQA-GSQGVNIDNQNGGAGGSLGKSCC 425
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + +P K CC
Sbjct: 185 DSRAEPQTIKINQPDQAASGGRPAQKSACC 214
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV---LRSKKEQKERQVLNSDTVNIRKHTTKPGGK 57
GI+ FETSAK N+NVEE+F +I + L + E Q + + + +P K
Sbjct: 151 YGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQAASGGRPAQK 210
Query: 58 KKVC 61
C
Sbjct: 211 SACC 214
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D +VV + A+ FA+Q+GI ETSAKD NVE FMA+ + Q
Sbjct: 118 LVGNKSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR G K CC
Sbjct: 178 SANNARPPTVQIRGQPV--GQKGGCC 201
>gi|318037484|ref|NP_001188027.1| ras-related protein rab-3d [Ictalurus punctatus]
gi|308324635|gb|ADO29452.1| ras-related protein rab-3d [Ictalurus punctatus]
Length = 223
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++ TED+QR A+++G Q FE SAKDNINV+++F + +++ E
Sbjct: 136 LVGNKCDLEDDRLIPTEDSQRLADELGFQFFEASAKDNINVKQVFEQLVDVICEKMNETM 195
Query: 152 E 152
E
Sbjct: 196 E 196
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 36
+G Q FE SAKDNINV+++F + +++ E E
Sbjct: 161 LGFQFFEASAKDNINVKQVFEQLVDVICEKMNETME 196
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V ED QR AN++G Q FE SAKDNINV+++F + +++
Sbjct: 135 LVGNKCDLEDDRLVAREDGQRLANELGFQFFEASAKDNINVKQVFERLVDII 186
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|158343283|gb|ABW35314.1| Rab1D [Karlodinium micrum]
Length = 263
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L LVGNK D+ ++ VL E+A+ FA G+ +ETSAKD++NV+E F+A+ + ++
Sbjct: 116 LILVGNKCDNSARREVLFEEAESFATSHGMLFYETSAKDDVNVQEAFLALVSALI 170
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KKVV + A+ FA+++GI ETSAK+ INVE+ FM + + Q
Sbjct: 118 LVGNKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV ++ P K CC
Sbjct: 178 AMNSTRPTTVQMKGQPVVP--KSGCC 201
>gi|47211791|emb|CAF93705.1| unnamed protein product [Tetraodon nigroviridis]
Length = 143
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V TED QR A ++G Q FE SAKDNINV+++F + +++ E
Sbjct: 56 LVGNKCDLEDDRLVPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDIICDKMNESM 115
Query: 152 E 152
E
Sbjct: 116 E 116
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 36
+G Q FE SAKDNINV+++F + +++ E E
Sbjct: 81 LGFQFFEASAKDNINVKQVFERLVDIICDKMNESME 116
>gi|341878786|gb|EGT34721.1| CBN-RAB-35 protein [Caenorhabditis brenneri]
Length = 201
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 94 GNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK---KEQ 150
GNK ++ ++VVL DA+ +A M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 113 GNKCEESDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITSLVLTAKLANPSA 172
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKC 176
+ S V+++ + KKKC
Sbjct: 173 ATKDQHRSGGVSLKDTSGNSNQKKKC 198
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
M I FETSAK++ NVE MF IT+LVL +K
Sbjct: 136 MNIAFFETSAKEDKNVEPMFTCITSLVLTAK 166
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV + A+ FA+++GI ETSAK+ NVE+ FM + + K
Sbjct: 118 LVGNKSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KNRMA 174
Query: 152 ERQVLNSDTVNIRKHTTKP--GGKKKCC 177
+ V+N IR KP K CC
Sbjct: 175 SQPVINKPGATIRPGEGKPVNSSKSSCC 202
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV E A+ FA+++GI ETSAK+ +NVE+ FMA++ + Q
Sbjct: 118 LVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + K CC
Sbjct: 178 AANSARPATVQIRGQPVEQ--KTSCC 201
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 137 LVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 188
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV TE A+ FA++MGI ETSAK+ NV++ FMA+ + K
Sbjct: 118 LVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASI-------K 170
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R N R T + G K CC
Sbjct: 171 DRMASQPAAANARPATVQIRGQPVNQKTSCC 201
>gi|1845598|gb|AAB47925.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++VV TE ++ A+Q+G++ FETSAK+NINV+ +F + +++ E
Sbjct: 131 LVGNKCDLEEERVVSTERGKQLADQLGLEFFETSAKENINVKAVFERLVDIICEKMSESL 190
Query: 152 ERQ--VLNSDTVNIRKHTTKPGGKKKCC 177
+ ++NS T R T P + C
Sbjct: 191 DTDPTLVNSQTKGTRLLTENPNPQNGSC 218
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ--VLNSDTVNIRKHTTKPGGKK 58
+G++ FETSAK+NINV+ +F + +++ E + ++NS T R T P +
Sbjct: 156 LGLEFFETSAKENINVKAVFERLVDIICEKMSESLDTDPTLVNSQTKGTRLLTENPNPQN 215
Query: 59 KVC 61
C
Sbjct: 216 GSC 218
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V TED QR A ++G Q FE SAKDNINV+++F + +++ E
Sbjct: 135 LVGNKCDLEDDRLVPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDIICDKMSESM 194
Query: 152 E 152
E
Sbjct: 195 E 195
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 36
+G Q FE SAKDNINV+++F + +++ E E
Sbjct: 160 LGFQFFEASAKDNINVKQVFERLVDIICDKMSESME 195
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV TE AQ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 ASNNARPPTVQIRGQPVNQ--KSGCC 201
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + + V T AQ +A ++GI ETSAKD+INVEE F+A++ + SK +
Sbjct: 118 LVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKA--R 175
Query: 152 ERQVLNSDTVNIRKHTTKP----GGKKKCC 177
+ L NI + +P K +CC
Sbjct: 176 SQAALERKPSNIVQMKGQPIQQEQQKSRCC 205
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKP 54
+GI ETSAKD+INVEE F+A++ + SK + + L NI + +P
Sbjct: 143 IGIPFLETSAKDSINVEEAFLAMSAAIKNSKA--RSQAALERKPSNIVQMKGQP 194
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA++MGI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AASNARPPTVQIRGQPVNQ--KTSCC 201
>gi|326916650|ref|XP_003204619.1| PREDICTED: ras-related protein Rab-10-like [Meleagris gallopavo]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 126 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 184
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 185 EP---NSENVDISSGGGVTGWKSKCC 207
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 152 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 207
>gi|358341770|dbj|GAA49364.1| Ras-related protein Rab-35 [Clonorchis sinensis]
Length = 226
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND P K V DAQR A + ETSAK + NV++MF IT LR + +
Sbjct: 138 LVGNKNDTPALKTVAAHDAQRLAAKHSCLFIETSAKSDENVDQMFDMITREALRLRLQLA 197
Query: 152 ERQV-LNSDTVNIRKHTTKPGGKKK-CC 177
+Q +++ +R P K++ CC
Sbjct: 198 SQQCNAMPNSITLRPVAAAPPEKRRNCC 225
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV TE A+ FA+++GI ETSAKD+INVE+ F+ + + + Q
Sbjct: 118 LVGNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+S TV ++ + CC
Sbjct: 178 NATARSSSTVQMKGQPIQQ--NSNCC 201
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA++MGI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AAANARPPTVQIRGQPVNQ--KTSCC 201
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA++MGI ETSAK+ NVE+ FMA+ + Q
Sbjct: 121 LVGNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQP 180
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 181 AAANARPPTVQIRGQPVNQ--KTSCC 204
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 118 LVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + +P K CC
Sbjct: 185 DSRAEPQTIKINQPDQATSGGQPAQKSACC 214
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPG--GKK 58
GI+ FETSAK N+NVEE+F +I + + + R + +N T G +K
Sbjct: 151 YGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQATSGGQPAQK 210
Query: 59 KVC 61
C
Sbjct: 211 SAC 213
>gi|348574253|ref|XP_003472905.1| PREDICTED: ras-related protein Rab-10-like [Cavia porcellus]
Length = 178
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 97 LLGNKCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 155
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 156 EP---NSENVDISSGGGVTGWKSKCC 178
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 123 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 178
>gi|218194924|gb|EEC77351.1| hypothetical protein OsI_16033 [Oryza sativa Indica Group]
Length = 628
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + +VV T AQ +A+++GI ETSAKD+INVEE F+A+ + + K +
Sbjct: 537 LVGNKCDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGSQ 596
Query: 152 ---ERQVLN 157
ER+ N
Sbjct: 597 AALERKASN 605
Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK---ERQVLN 41
+GI ETSAKD+INVEE F+A+ + + K + ER+ N
Sbjct: 562 IGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGSQAALERKASN 605
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 118 LVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|213511948|ref|NP_001133667.1| Ras-related protein Rab-3D [Salmo salar]
gi|209154872|gb|ACI33668.1| Ras-related protein Rab-3D [Salmo salar]
Length = 224
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V ED QR A+++G Q FE SAKDNINV+++F + +++
Sbjct: 138 LVGNKADLEDDRLVPAEDGQRLADELGFQFFEASAKDNINVKQVFERLVDVI 189
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|402890290|ref|XP_003908421.1| PREDICTED: ras-related protein Rab-10 [Papio anubis]
Length = 179
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 98 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 156
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 157 EP---NSENVDISSGGGVTGWKSKCC 179
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 124 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 179
>gi|222635255|gb|EEE65387.1| hypothetical protein OsJ_20709 [Oryza sativa Japonica Group]
Length = 615
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + +VV T AQ +A+++GI ETSAKD+INVEE F+A+ + + K +
Sbjct: 524 LVGNKCDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGSQ 583
Query: 152 ---ERQVLN 157
ER+ N
Sbjct: 584 AALERKASN 592
Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK---ERQVLN 41
+GI ETSAKD+INVEE F+A+ + + K + ER+ N
Sbjct: 549 IGIPFLETSAKDSINVEEAFLAMCAAIKKQKSGSQAALERKASN 592
>gi|149391195|gb|ABR25615.1| gtp-binding protein yptm2 [Oryza sativa Indica Group]
Length = 152
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA++MGI ETSAK+ NVE+ FMA+ + Q
Sbjct: 67 LVGNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQP 126
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR +P +K C
Sbjct: 127 AAANARPPTVQIRG---QPVNQKTSC 149
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|126282597|ref|XP_001369645.1| PREDICTED: ras-related protein Rab-15-like [Monodelphis domestica]
Length = 212
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ FETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGKEQGQQLAKEYGMDFFETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ K++
Sbjct: 171 QAHKKE 176
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NIN+E+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
QV S V+I + + G KCC
Sbjct: 180 SEQV-GSQGVSIDQQGSGLNGSAGGKCC 206
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI + + E
Sbjct: 1395 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAES 1454
Query: 151 KERQVLNSDTVNIRK 165
+ ++ ++ RK
Sbjct: 1455 DQGRLDVANGTKFRK 1469
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI + + E
Sbjct: 1451 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAES 1510
Query: 151 KERQVLNSDTVNIRK 165
+ ++ ++ RK
Sbjct: 1511 DQGRLDVANGTKFRK 1525
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI + + E
Sbjct: 1452 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAES 1511
Query: 151 KERQVLNSDTVNIRK 165
+ ++ ++ RK
Sbjct: 1512 DQGRLDVANGTKFRK 1526
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +KVV TE A+ FA+++GI ETSAK+ NVEE FMA+T +
Sbjct: 118 LVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>gi|395504097|ref|XP_003756395.1| PREDICTED: ras-related protein Rab-15 [Sarcophilus harrisii]
Length = 212
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ FETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFFETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ K++
Sbjct: 171 QAHKKE 176
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +L+ K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILK-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 178 EP---NSENVDISSGSGVTGWKSKCC 200
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +L+ K KE NS+ V+I + G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILK-KTPVKEP---NSENVDISSGSGVTGWKSKCC 200
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|323450829|gb|EGB06708.1| hypothetical protein AURANDRAFT_71930 [Aureococcus anophagefferens]
Length = 600
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+ V TE AQ FA+ +GIQ ETSAK++ NVE+ F + + K Q
Sbjct: 516 LVGNKCDLASKRAVPTEQAQEFADSLGIQYLETSAKNSTNVEKAFTTMAGQI--RKWMQT 573
Query: 152 ERQVLNSDTVNIRKHT---TKPGGKKKCC 177
+ VNI K TK GG CC
Sbjct: 574 QPTPAAQTKVNISKGQQIDTKGGG--GCC 600
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + +VV T AQ +A+++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAESRVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 IGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V + A+ FA+Q+GI ETSAKD NVE FMA+ + Q
Sbjct: 118 LVGNKSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR G K CC
Sbjct: 178 SANNARPPTVQIRGQPV--GQKSGCC 201
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK N+N+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK N+N+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANVNIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + + V E A+ FA+++GI ETSAKD+ NVE+ FMA+ + S KE+
Sbjct: 118 LVGNKCDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAS----SIKERM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G K CC
Sbjct: 174 ASQPTNNARPPTVQIRGQPV--GQKSGCC 200
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS---DTVNIRKHTTKPGGK 57
+GI ETSAKD+ NVE+ FMA+ + S KE+ Q N+ TV IR +P G+
Sbjct: 143 IGIPFMETSAKDSTNVEQAFMAMAS----SIKERMASQPTNNARPPTVQIRG---QPVGQ 195
Query: 58 KKVC 61
K C
Sbjct: 196 KSGC 199
>gi|62702214|gb|AAX93140.1| unknown [Homo sapiens]
Length = 157
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 76 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 134
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 135 EP---NSENVDISSGGGVTGWKSKCC 157
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 102 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 157
>gi|348511151|ref|XP_003443108.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 222
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++ TED QR A ++G Q FE SAKDNINV+++F + +++ E
Sbjct: 135 LVGNKCDLEDDRLIPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDVICEKMNESM 194
Query: 152 E 152
E
Sbjct: 195 E 195
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 36
+G Q FE SAKDNINV+++F + +++ E E
Sbjct: 160 LGFQFFEASAKDNINVKQVFERLVDVICEKMNESME 195
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KK+V T A+ +A+ +GI ETSAK + NVE+ FM + + + KK Q
Sbjct: 118 LVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI---KKLQG 174
Query: 152 ERQVLNSDTVNIRKHTTKPGG------KKKC 176
Q N+ T N H KP G KKKC
Sbjct: 175 GIQPNNNSTYN--AHVVKPTGFTPIGKKKKC 203
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPG----- 55
+GI ETSAK + NVE+ FM + + + KK Q Q N+ T N H KP
Sbjct: 143 VGIPFLETSAKSSANVEQAFMIMASEI---KKLQGGIQPNNNSTYN--AHVVKPTGFTPI 197
Query: 56 GKKKVCTVL 64
GKKK C+++
Sbjct: 198 GKKKKCSII 206
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NIN+E+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
QV S V+I + + G KCC
Sbjct: 180 SEQV-GSQGVSIDQQGSGLNGNAGGKCC 206
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KK+V T A+ +A+ +GI ETSAK + NVE+ FM + + + KK Q
Sbjct: 118 LVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI---KKLQG 174
Query: 152 ERQVLNSDTVNIRKHTTKP------GGKKKCC 177
Q ++ T N H KP GGKKK C
Sbjct: 175 GIQPNSNSTYN--THVVKPTGFTPIGGKKKKC 204
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 11/70 (15%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKP------ 54
+GI ETSAK + NVE+ FM + + + KK Q Q ++ T N H KP
Sbjct: 143 VGIPFLETSAKSSANVEQAFMIMASEI---KKLQGGIQPNSNSTYN--THVVKPTGFTPI 197
Query: 55 GGKKKVCTVL 64
GGKKK C++L
Sbjct: 198 GGKKKKCSIL 207
>gi|32264603|gb|AAP78748.1| Ac1075 [Rattus norvegicus]
Length = 137
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 56 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 114
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 115 EP---NSENVDISSGGGVTGWKSKCC 137
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 82 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 137
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAKD NVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV +R + G CC
Sbjct: 178 AMNNAKPSTVQLRGQPVEQKG--GCC 201
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ- 150
LVGNK D ++VV TE ++ A+Q+G++ FETSAK+NINV+ +F + +++ E
Sbjct: 131 LVGNKCDLEDERVVSTERGKQLADQIGLEFFETSAKENINVKAVFERLVDIICDKMSESL 190
Query: 151 -KERQVLNSDTVNIR--KHTTKPGGKKKC 176
++ ++NS T R ++T GG +C
Sbjct: 191 DQDPSLVNSQTKGTRLTENTAPEGGSCQC 219
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ--KERQVLNSDTVNIR--KHTTKPGG 56
+G++ FETSAK+NINV+ +F + +++ E ++ ++NS T R ++T GG
Sbjct: 156 IGLEFFETSAKENINVKAVFERLVDIICDKMSESLDQDPSLVNSQTKGTRLTENTAPEGG 215
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK N N+E+ F+ + +LR K K
Sbjct: 119 LLGNKFDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 178 EP---NSENVDISSGGSVTGWKSKCC 200
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK N N+E+ F+ + +LR K KE NS+ V+I + G K K C
Sbjct: 145 GIRFFETSAKANTNIEKAFLTLAQDILR-KTPVKEP---NSENVDISSGGSVTGWKSKCC 200
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI L
Sbjct: 1451 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAKRYL 1504
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI L
Sbjct: 1476 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAKRYL 1529
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI L
Sbjct: 1424 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAKRYL 1477
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI L
Sbjct: 1479 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAKRYL 1532
>gi|149050832|gb|EDM03005.1| RAB10, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 118
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 37 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 95
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 96 EP---NSENVDISSGGGVTGWKSKCC 118
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 63 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 118
>gi|67472931|ref|XP_652253.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469075|gb|EAL46866.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790104|dbj|BAD82848.1| small GTPase EhRabM2 [Entamoeba histolytica]
gi|407034040|gb|EKE37020.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449707734|gb|EMD47335.1| small GTPase EhRabM2, putative [Entamoeba histolytica KU27]
Length = 203
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 82 YCWLFPSGLRLV--GNKND--DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFM 137
YC P G+++V GNK D D +VV TE+ Q+F+N+ FETSAK NI VE F
Sbjct: 108 YC---PQGVKIVVVGNKVDLADEDLRVVSTEEGQKFSNEGNFDFFETSAKRNIKVEAAFR 164
Query: 138 AITNLVLRSKKEQKERQV-LNSDTVNIRKHTTKPGGKKKCC 177
+ +++S+ K+ Q +++ V+I ++K KKCC
Sbjct: 165 DLVTKIVQSENLPKQSQFEVSTSKVSISTESSKEN--KKCC 203
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV E A+ FA+++GI ETSAK+ +NVE+ FMA++ + Q
Sbjct: 118 LVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + K CC
Sbjct: 178 AANNARPATVQIRGQPVEQ--KTSCC 201
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI
Sbjct: 1422 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAI 1470
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
L+GNK D DP ++ V TE Q A++ GI+ FETSAK NIN++ F AI
Sbjct: 1424 LIGNKCDVDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAI 1472
>gi|218197858|gb|EEC80285.1| hypothetical protein OsI_22287 [Oryza sativa Indica Group]
Length = 134
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + +VV T AQ +A+++GI ETSAKD+INVEE F+A+ + + K
Sbjct: 43 LVGNKCDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAIKKQK 98
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAKD+INVEE F+A+ + + K
Sbjct: 68 IGIPFLETSAKDSINVEEAFLAMCAAIKKQK 98
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLSDS 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + ++ K CC
Sbjct: 185 DSKSEPQTIKINQADNGAGASQTAQKSACC 214
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV TE + FA+ +GI+ ETSAK + NVE+ F+ + + + K Q
Sbjct: 147 LVGNKCDLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQP 206
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
VN+R K G CC
Sbjct: 207 SAAPATKPGVNLRSQQVKKEG-GGCC 231
>gi|432099579|gb|ELK28720.1| Ras-related protein Rab-3D [Myotis davidii]
Length = 219
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VVL ED QR A+ +G + FE SAK+NINV+++F + +++
Sbjct: 132 LVGNKCDLEDERVVLAEDGQRLADDLGFEFFEASAKENINVKQVFERLVDVI 183
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKVNINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NI++E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 178 EP---NSENVDISGGSGVTGWKSKCC 200
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NI++E+ F+ + +LR K KE NS+ V+I + G K K C
Sbjct: 145 GIRFFETSAKANISIEKAFLTLAEDILR-KTPVKEP---NSENVDISGGSGVTGWKSKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----SK 147
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + SK
Sbjct: 120 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSK 179
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGK--KKCC 177
EQ Q +N D N GG K CC
Sbjct: 180 AEQAGSQGVNIDNQN------GTGGSLGKSCC 205
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAES 184
Query: 151 KERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
R T+ I + GG K CC
Sbjct: 185 DNRA--EPQTIRINQPDQGAGGAQTAQKSACC 214
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKK 58
GI+ FETSAK N+NVEE+F +I + + E R T+ I + GG +
Sbjct: 151 YGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDNRA--EPQTIRINQPDQGAGGAQ 206
>gi|50540426|ref|NP_001002679.1| ras-related protein Rab-3B [Danio rerio]
gi|49899208|gb|AAH75784.1| Zgc:86892 [Danio rerio]
Length = 220
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++++ TED+QR A+++G Q FE SAKD+INV+++F + +++
Sbjct: 134 LVGNKCDLEDERLIPTEDSQRLAHELGFQFFEASAKDSINVKQVFECLVDVI 185
>gi|449270352|gb|EMC81037.1| Ras-related protein Rab-3C [Columba livia]
Length = 219
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + A Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVIFTERGKHLAEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPAIAASKQNTRLKDTPPPQQPNC 217
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAIAASKQNTRLKDTPP 211
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMF-MAITNLVLRSKK 148
+ L+GNK D + VLTEDA R+A Q GI ETSA D+INVEE F I ++ K
Sbjct: 119 IMLIGNKCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISK 178
Query: 149 E----QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ++ ++ + I++ K K+K C
Sbjct: 179 HPSFNMNETNIIPTNNLPIQEPNIKQSAKRKFC 211
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D+ + V ++ ++ A++ G++ ETSAK N+NV E F AI +Q
Sbjct: 120 LVGNKCDNSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFRAIA--------QQV 171
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
++ + ++ + KPGGKK CC
Sbjct: 172 TSRIPSRAAGGVKLQSAAKPGGKKGCC 198
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIR-KHTTKPGGKKK 59
G++ ETSAK N+NV E F AI +Q ++ + ++ + KPGGKK
Sbjct: 145 YGVRFIETSAKQNVNVTEAFRAIA--------QQVTSRIPSRAAGGVKLQSAAKPGGKKG 196
Query: 60 VC 61
C
Sbjct: 197 CC 198
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
Q S V+I + P G KCC
Sbjct: 180 SEQP-GSQGVSIDQQGPGPNGSTGGKCC 206
>gi|387017936|gb|AFJ51086.1| ras-related protein Rab-3D-like [Crotalus adamanteus]
Length = 220
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +V+ TED +R A+++G++ FE SAKDNINV+++F + +++
Sbjct: 132 LVGNKCDLEDDRVIPTEDGKRLADELGLEFFEASAKDNINVKQVFERLVDII 183
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D KVV TE+ Q A++ G++ FETSAK+NINVE F+ I V + +
Sbjct: 121 LIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREV--KNRLME 178
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E D+VN+ KP KK C
Sbjct: 179 EGGPHKKDSVNL---NAKPAPVKKSC 201
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
G++ FETSAK+NINVE F+ I V + +E D+VN+ KP KK C
Sbjct: 147 GVKFFETSAKNNINVEGGFIEIAREV--KNRLMEEGGPHKKDSVNL---NAKPAPVKKSC 201
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
L+GNKND + KVV TE + A+++GI ETSAKD+INVE+ F+ I
Sbjct: 118 LIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIA 166
>gi|390469209|ref|XP_003734069.1| PREDICTED: ras-related protein Rab-15-like [Callithrix jacchus]
Length = 212
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + ++ K CC
Sbjct: 185 DSRAEPQTIKINQPDQAGSASQAAPKSACC 214
>gi|395745988|ref|XP_003778367.1| PREDICTED: ras-related protein Rab-15 [Pongo abelii]
Length = 208
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 107 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 166
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 167 QAHRKELE 174
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ + + R Q
Sbjct: 118 LVGNKCDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKRKMGNQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV ++ + K CC
Sbjct: 178 TANKSTGGTVQMKGQPIQQ--KNNCC 201
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKNDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AMNNARPPTVQIRGQPVNQ--KSGCC 201
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV + A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|257222596|gb|ACV52576.1| ras-related GTP-binding protein [Nicotiana benthamiana]
Length = 131
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK+D +VV E A+ FA+++GI ETSAKD NVE+ FMA+T+ +
Sbjct: 72 LVGNKSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAI 123
>gi|403264421|ref|XP_003924482.1| PREDICTED: ras-related protein Rab-15 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|395849707|ref|XP_003797458.1| PREDICTED: ras-related protein Rab-15 [Otolemur garnettii]
Length = 341
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 240 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 299
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 300 QAHRKELE 307
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV TE+ Q+ A++ GI FE SAK++I+VE FM I V K
Sbjct: 123 LVGNKCDMLDEKVVSTEEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKDRLKADG 182
Query: 152 ERQVLNSDTVNIRKHTTKPGGK-KKCC 177
+ +N++ + + GGK KKCC
Sbjct: 183 QGGPSAKTGLNLKPN--QSGGKDKKCC 207
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++VV TE Q+ A+++GI E SAK NINVE+ F ++ + + + +
Sbjct: 120 LIGNKCDWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDTA 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ S V++ + GG KCC
Sbjct: 180 KTDASASQGVDVGAQGSGSGG--KCC 203
>gi|402876447|ref|XP_003901979.1| PREDICTED: ras-related protein Rab-15 [Papio anubis]
gi|426377184|ref|XP_004055353.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Gorilla gorilla
gorilla]
Length = 212
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|397507196|ref|XP_003824091.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Pan paniscus]
gi|27734452|sp|P59190.1|RAB15_HUMAN RecName: Full=Ras-related protein Rab-15
gi|119601301|gb|EAW80895.1| RAB15, member RAS onocogene family, isoform CRA_c [Homo sapiens]
gi|355390223|dbj|BAL14290.1| Ras-related protein Rab-15 isoform CN [Homo sapiens]
Length = 212
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK N+++E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I + G K KCC
Sbjct: 178 EP---NSENVDISGGSGVTGWKSKCC 200
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK N+++E+ F+ + +LR K KE NS+ V+I + G K K C
Sbjct: 145 GIRFFETSAKANVSIEKAFLTLAEDILR-KTPVKEP---NSENVDISGGSGVTGWKSKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV E A+ FA+++GI ETSAK+ +NVE+ FMA++ + Q
Sbjct: 118 LVGNKCDLTDKRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + K CC
Sbjct: 178 AANNARPATVQIRGQPVEQ--KTSCC 201
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV TE A+ FA+ +GI ETSAK++INVEE F+ +++ + K+
Sbjct: 120 LVGNKCDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEI--KKRMAT 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ V TV++ K CC
Sbjct: 178 QPTVERRPTVHVHMKGQPIQQKSSCC 203
>gi|114052380|ref|NP_001040003.1| ras-related protein Rab-15 [Bos taurus]
gi|116255979|sp|Q1RMR4.1|RAB15_BOVIN RecName: Full=Ras-related protein Rab-15
gi|92098359|gb|AAI14761.1| RAB15, member RAS onocogene family [Bos taurus]
gi|296482998|tpg|DAA25113.1| TPA: RAB15, member RAS onocogene family [Bos taurus]
Length = 212
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
L+GNKND + KVV TE + A+++GI ETSAKD+INVE+ F+ I
Sbjct: 118 LIGNKNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAFLTIA 166
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+++GI ETSAK+ NVE+ F+ + N + Q
Sbjct: 118 LVGNKSDLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKP-GGKKKCC 177
+ S IR +P K CC
Sbjct: 178 QAASGASRGATIRPGEGRPVNAKSSCC 204
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ + + KK+
Sbjct: 118 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEI---KKKMS 174
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ N+ T ++ K CC
Sbjct: 175 NQPTANNSTGTVQMKGQPIEQKNNCC 200
>gi|426233532|ref|XP_004010770.1| PREDICTED: ras-related protein Rab-15 [Ovis aries]
Length = 212
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 171 QAHRKELE 178
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +L+ K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILK-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISTGGGVTGWKSKCC 200
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +L+ K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILK-KTPVKEP---NSENVDISTGGGVTGWKSKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|397514337|ref|XP_003827446.1| PREDICTED: ras-related protein Rab-3C [Pan paniscus]
Length = 227
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKETPPPPQPSCA 226
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V + A+ FA+Q+GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR G K CC
Sbjct: 178 SANNGRPPTVQIRGQPV--GQKSGCC 201
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+GI ETSAKD NVE+ FMA++ + Q TV IR +P G+K
Sbjct: 143 IGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNGRPPTVQIRG---QPVGQKSG 199
Query: 61 C 61
C
Sbjct: 200 C 200
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV TE Q A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ V S VN+ + + G KCC
Sbjct: 180 KTDVGTSSGVNVGEKSEAASG--KCC 203
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D KVV TE+ Q A++ G++ FETSAK+NINVE F+ I V + +
Sbjct: 121 LIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREV--KNRLME 178
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E D+VN+ KP KK C
Sbjct: 179 EGGPHKKDSVNL---NAKPAPVKKGC 201
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + + + E A+ FA+++GI ETSAKD NVE+ FMA++ + Q
Sbjct: 173 LVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQP 232
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 233 AGNNARPPTVQIRGQPV--AQKNGCC 256
>gi|363744183|ref|XP_003642996.1| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 227
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + A Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVIFTERGKHLAEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 200 ETDPSITAGKQNTRLKDTPPPQQPNC 225
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V + A+ FA+Q+GI ETSAKD NVE+ FM ++ + Q
Sbjct: 118 LVGNKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR P K CC
Sbjct: 178 SANNGRPPTVQIRGQPVGP--KSGCC 201
>gi|67474168|ref|XP_652833.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|167386747|ref|XP_001737888.1| rab8 [Entamoeba dispar SAW760]
gi|56469726|gb|EAL47447.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790102|dbj|BAD82847.1| small GTPase EhRabM1 [Entamoeba histolytica]
gi|165899149|gb|EDR25817.1| rab8, putative [Entamoeba dispar SAW760]
gi|407039427|gb|EKE39639.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702704|gb|EMD43293.1| small GTPase EhRabM1, putative [Entamoeba histolytica KU27]
Length = 211
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 74 WMT-ICPIIYCWLFPSGLR--LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDN 129
W+T +C YC P G++ +VGNK D + + + V E+ +++AN+ G + FETSAK N
Sbjct: 101 WITDVCS--YC---PQGVKVMIVGNKIDLEMESREVSYEEGKQYANERGYEFFETSAKLN 155
Query: 130 INVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTT 168
+ VE F + +L+S+ Q E Q N T+ ++K +T
Sbjct: 156 VKVEAAFRGLVQSILQSRNFQTEVQTTTNEPTIKLQKQST 195
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTT 52
G + FETSAK N+ VE F + +L+S+ Q E Q N T+ ++K +T
Sbjct: 144 GYEFFETSAKLNVKVEAAFRGLVQSILQSRNFQTEVQTTTNEPTIKLQKQST 195
>gi|332237000|ref|XP_003267688.1| PREDICTED: ras-related protein Rab-15 [Nomascus leucogenys]
Length = 243
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 142 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 201
Query: 145 RSKKEQKE 152
++ +++ E
Sbjct: 202 QAHRKELE 209
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F + + + + K
Sbjct: 409 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSK 468
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
Q S V+I + P G KCC
Sbjct: 469 SEQP-GSQGVSIDQQGPGPNGSTGGKCC 495
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLAET 184
Query: 151 KERQVLNSDTVNIRKHTTKPG---GKKKCC 177
+ ++ +N H K CC
Sbjct: 185 DSKAEPHTIRINPPDHAAGSAETPAKSACC 214
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-TNLVLRSKKEQ 150
L+GNK D +K+ V TE Q A+++GI E SAK NIN+++ F ++ +++ R+ Q
Sbjct: 119 LIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTQ 178
Query: 151 KERQVLNSDTVNIRKHTTKPGG-KKKCC 177
K+ Q S VN GG KCC
Sbjct: 179 KDFQNPGSVNVNAGAQGNSAGGMGGKCC 206
>gi|348573563|ref|XP_003472560.1| PREDICTED: ras-related protein Rab-15-like [Cavia porcellus]
Length = 199
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 98 PEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNVNIKESFTRLTELVL 157
Query: 145 RSKKEQ 150
++ +++
Sbjct: 158 QAHRKE 163
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKA--G 175
Query: 152 ERQVLNSDTVNIRKHTTKP----GGKKKCC 177
+ L NI + +P K +CC
Sbjct: 176 SQAALERKPSNIVQMKGQPIQQEQQKSRCC 205
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 IGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV TE A+ FA+ +GI ETSAK++INVEE F+ +++ + K+
Sbjct: 120 LVGNKCDLVDSKVVDTEKAKDFADSLGIPFIETSAKESINVEEAFLTMSSEI--KKRMAT 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ V TV++ K CC
Sbjct: 178 QPTVERRPTVHVHMKGQPIQQKSSCC 203
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + +
Sbjct: 126 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKLADT 185
Query: 151 KERQVLNSDTVNIRKHTTKPGG---KKKCC 177
R + +N + + GG +K CC
Sbjct: 186 DSRAEPQTIQIN-QPDASASGGQAAQKSCC 214
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+++ E + A + GI+ ETSAK N+NVE+ FM + +LR K QK
Sbjct: 119 LLGNKCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILR-KTPQK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ N D+ ++ H K CC
Sbjct: 178 DS---NPDSSSVSVHKETSSRKSGCC 200
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTT 52
GI+ ETSAK N+NVE+ FM + +LR K QK+ +S +V++ K T+
Sbjct: 145 GIKFLETSAKSNVNVEKAFMTLAEDILR-KTPQKDSNP-DSSSVSVHKETS 193
>gi|350594328|ref|XP_003359827.2| PREDICTED: ras-related protein Rab-3C-like isoform 1 [Sus scrofa]
Length = 225
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 138 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 198 ETDPAITAAKQNTRLKETPPPPQPSC 223
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 163 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 217
>gi|327264043|ref|XP_003216826.1| PREDICTED: ras-related protein Rab-3D-like [Anolis carolinensis]
Length = 220
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V TED +R A+++G + FE SAKDNINV+++F + +++
Sbjct: 132 LVGNKCDLEDDRIVPTEDGKRLADELGFEFFEASAKDNINVKQVFERLVDII 183
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK+D +K+V+ TE + A + GI FETSAK N NV + F AI ++
Sbjct: 121 LVGNKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDAFFAIARII 172
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----SK 147
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINV++ F ++ + + + +K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTK 179
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
EQ Q +N D N + G KCC
Sbjct: 180 SEQAGGQGVNIDQNNAGSNGNLGG---KCC 206
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKA--G 175
Query: 152 ERQVLNSDTVNIRKHTTKP----GGKKKCC 177
+ L NI + +P K +CC
Sbjct: 176 SQAALERKPSNIVQMKGQPIQQEQQKSRCC 205
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 IGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|350594330|ref|XP_003483878.1| PREDICTED: ras-related protein Rab-3C-like isoform 2 [Sus scrofa]
Length = 227
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKETPPPPQPSC 225
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
>gi|427794601|gb|JAA62752.1| Putative rab subfamily protein of small gtpase, partial
[Rhipicephalus pulchellus]
Length = 248
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVG KND KK V + A FA++ G+QLFETSA D NV+E F AI ++R
Sbjct: 158 LVGCKNDLTAKKTVDYDAAMAFADERGLQLFETSAVDGTNVDEAFTAIATEIMR 211
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLR 29
G+QLFETSA D NV+E F AI ++R
Sbjct: 184 GLQLFETSAVDGTNVDEAFTAIATEIMR 211
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + +
Sbjct: 126 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 185
Query: 151 KERQVLNSDTVNIRKHTTKPGG---KKKCC 177
R + +N + + GG +K CC
Sbjct: 186 DSRAEPQTIQIN-QPDASASGGQAAQKSCC 214
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDLTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV + + G CC
Sbjct: 178 AMNNAKPSTVQFKGQPVEQKG--GCC 201
>gi|149629515|ref|XP_001517743.1| PREDICTED: ras-related protein Rab-3D-like, partial
[Ornithorhynchus anatinus]
Length = 103
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L+GNK D ++VV TED +R A+ +G + FE SAKDNINV+++F + +++
Sbjct: 16 LIGNKCDLEDERVVPTEDGKRLADDLGFEFFEASAKDNINVKQVFERLVDII 67
>gi|395507068|ref|XP_003757850.1| PREDICTED: ras-related protein Rab-10 [Sarcophilus harrisii]
Length = 190
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ ETSAK NIN+E+ F+ + +LR K K
Sbjct: 109 LLGNKCDMEDKRVVSKAKGEQIAKEHGIRFLETSAKANINIEKAFLTLAEDILR-KTPVK 167
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 168 EP---NSENVDISSGGGVTGWKSKCC 190
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ ETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 135 GIRFLETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 190
>gi|19923985|ref|NP_612462.1| ras-related protein Rab-3C [Homo sapiens]
gi|388452650|ref|NP_001252924.1| ras-related protein Rab-3C [Macaca mulatta]
gi|297675313|ref|XP_002815628.1| PREDICTED: ras-related protein Rab-3C isoform 2 [Pongo abelii]
gi|332233625|ref|XP_003266004.1| PREDICTED: ras-related protein Rab-3C [Nomascus leucogenys]
gi|332821437|ref|XP_526915.3| PREDICTED: ras-related protein Rab-3C isoform 2 [Pan troglodytes]
gi|402871610|ref|XP_003899749.1| PREDICTED: ras-related protein Rab-3C [Papio anubis]
gi|23396832|sp|Q96E17.1|RAB3C_HUMAN RecName: Full=Ras-related protein Rab-3C
gi|15278255|gb|AAH13033.1| RAB3C, member RAS oncogene family [Homo sapiens]
gi|19067861|gb|AAK08968.1| Rab3c [Homo sapiens]
gi|119575373|gb|EAW54978.1| RAB3C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|355691328|gb|EHH26513.1| Ras-related protein Rab-3C [Macaca mulatta]
gi|355749935|gb|EHH54273.1| Ras-related protein Rab-3C [Macaca fascicularis]
gi|380809404|gb|AFE76577.1| ras-related protein Rab-3C [Macaca mulatta]
Length = 227
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKETPPPPQPNCA 226
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + + K CC
Sbjct: 185 DSKTEPQAIRINQSDQAGTSGQAAQKSSCC 214
>gi|426384624|ref|XP_004058859.1| PREDICTED: ras-related protein Rab-3C [Gorilla gorilla gorilla]
Length = 219
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N R T P + C
Sbjct: 192 ETDPAITAAKQNTRLKETPPPPQPNCA 218
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 211
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + + + E A+ FA+++GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AGNNARPPTVQIRGQPV--AQKNGCC 201
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +L+ K K
Sbjct: 119 LLGNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILK-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISTGGGVTGWKTKCC 200
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +L+ K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILK-KTPVKEP---NSENVDISTGGGVTGWKTKCC 200
Query: 62 T 62
+
Sbjct: 201 S 201
>gi|291395402|ref|XP_002714096.1| PREDICTED: RAB3C, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE QR Q+G + FE SAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQRLGEQLGFEFFEASAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPAVTAAKQNTRLKETPPPPQSTC 217
>gi|407038223|gb|EKE39000.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 187
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K V TE A FA Q G++ FETSAK +INVE F+ + + K + K
Sbjct: 106 LIGNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQDI---KNQMK 162
Query: 152 ERQVLNSDTVNIR---KHTTKPGGKKKCC 177
E + D V I+ + +PG CC
Sbjct: 163 ETPRVTPDNVAIKPEVQQEPQPG----CC 187
>gi|397605930|gb|EJK59155.1| hypothetical protein THAOC_20656 [Thalassiosira oceanica]
Length = 206
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV TE+ Q+ A + G+ +E SAK++INVE F+ I V +
Sbjct: 121 LVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDG 180
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
V + ++ G +K CC
Sbjct: 181 GGAGPAKKGVQLGRNDPAAGNRKGCC 206
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+ G K KCC
Sbjct: 178 EP---NSENVDFTSGGGVTGWKSKCC 200
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+ G K K C
Sbjct: 145 GIRFFETSAKANINIEKAFLTLAEDILR-KTPVKEP---NSENVDFTSGGGVTGWKSKCC 200
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D + KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 118 LVGNKSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMA 166
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q+ AN++GI E SAK+NINV++ F ++ + + K
Sbjct: 120 LIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVFK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGK--KKCC 177
Q S VNI G K CC
Sbjct: 180 AEQA-GSQGVNIDNQNGGAGSSLGKSCC 206
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISET 184
Query: 151 KERQVLNSDTVNIRKHTTKPGG----KKKCC 177
R + +N + + GG K CC
Sbjct: 185 DSRAEPQTIKIN-QPDPSASGGQAAQKSACC 214
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKER 37
GI+ FETSAK N+NVEE+F +I + + E R
Sbjct: 151 YGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSR 187
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + + + E A+ FA+++GI ETSAKD NVE+ FMA++ + Q
Sbjct: 110 LVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQP 169
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 170 AGNNARPPTVQIRGQPV--AQKNGCC 193
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV +E A+ FA+++GI ETSAK+ NVE+ FMA+ + K +
Sbjct: 118 LVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q NS TV IR K CC
Sbjct: 174 ASQPANSARPATVQIRGQPVNQ--KAGCC 200
>gi|348568990|ref|XP_003470281.1| PREDICTED: ras-related protein Rab-3C-like [Cavia porcellus]
Length = 219
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE QR Q+G + FETSAKDNINV++ F + +++
Sbjct: 132 LVGNKCDMEDERVISTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDII 183
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K V TE A FA Q G++ FETSAK +INVE F+ + + K + K
Sbjct: 118 LIGNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQDI---KNQMK 174
Query: 152 ERQVLNSDTVNIR---KHTTKPGGKKKCC 177
E + D V I+ + +PG CC
Sbjct: 175 ETPRVTPDNVAIKPEVQQEPQPG----CC 199
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV TE+ Q+ A + G+ +E SAK++INVE F+ I V +
Sbjct: 120 LVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDG 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
V + ++ G +K CC
Sbjct: 180 GGAGPAKKGVQLGRNDPAAGNRKGCC 205
>gi|395818775|ref|XP_003782792.1| PREDICTED: ras-related protein Rab-3C [Otolemur garnettii]
Length = 227
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKDTPPPPQPNCS 226
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKDTPP 219
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV +E A+ FA+++GI ETSAK+ NVE+ FMA+ + K +
Sbjct: 118 LVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q NS TV IR K CC
Sbjct: 174 ASQPANSARPATVQIRGQPVNQ--KAGCC 200
>gi|384485032|gb|EIE77212.1| Ras-like protein 1 [Rhizopus delemar RA 99-880]
Length = 206
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 WMTICPIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVE 133
+ IC + FP + LVGNK D + V +++ + A Q G Q ETSAK INVE
Sbjct: 104 YQQICRVKDRDYFP--MVLVGNKCDLESDRQVSSQEGKDLAKQFGCQFIETSAKQKINVE 161
Query: 134 EMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E F + + R KEQ+ R N+D ++++ KCC
Sbjct: 162 EAFFEVVKDIRRYNKEQENRGNSNNDQFVLQEN--HEVAADKCC 203
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
G Q ETSAK INVEE F + + R KEQ+ R N+D ++++ K
Sbjct: 145 FGCQFIETSAKQKINVEEAFFEVVKDIRRYNKEQENRGNSNNDQFVLQENHEVAADK--- 201
Query: 61 CTVL 64
C +L
Sbjct: 202 CCIL 205
>gi|328855882|gb|EGG05006.1| hypothetical protein MELLADRAFT_37102 [Melampsora larici-populina
98AG31]
Length = 209
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-----TNLVLRS 146
L+GNK D KKV+ E + A ++GI ETSAK N NVEE F ++ T L+ +
Sbjct: 120 LLGNKCDSTDKKVISEEQGRELATELGISFMETSAKTNTNVEEAFFSLARDIKTRLIDTA 179
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q N ++ + + T GGK CC
Sbjct: 180 GPDQSSGSNPNGSSITVNQSGT-AGGKTGCC 209
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPAITAAKQNTRFKETPPPPQPNC 217
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRFKETPP 211
>gi|403267520|ref|XP_003925875.1| PREDICTED: ras-related protein Rab-3C [Saimiri boliviensis
boliviensis]
Length = 227
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSEGL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E +++ N R T P + C
Sbjct: 200 ETDPAISAAKQNTRLKETPPPPQPNCA 226
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV ++ A + GI+ FETSAK N N+E+ F+ + +LR K K
Sbjct: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI+ FETSAK N N+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 145 GIRFFETSAKANTNIEKAFLTLAQDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|114052949|ref|NP_001040071.1| ras-related protein Rab-3C [Bos taurus]
gi|149732720|ref|XP_001495120.1| PREDICTED: ras-related protein Rab-3C-like [Equus caballus]
gi|426246459|ref|XP_004017011.1| PREDICTED: ras-related protein Rab-3C [Ovis aries]
gi|108935883|sp|P10949.3|RAB3C_BOVIN RecName: Full=Ras-related protein Rab-3C; AltName: Full=SMG P25C
gi|86438380|gb|AAI12796.1| RAB3C, member RAS oncogene family [Bos taurus]
gi|296475826|tpg|DAA17941.1| TPA: RAB3C, member RAS oncogene family [Bos taurus]
Length = 227
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKETPPPPQPNC 225
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
>gi|354479160|ref|XP_003501781.1| PREDICTED: ras-related protein Rab-15-like [Cricetulus griseus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|304600|gb|AAC37386.1| Rab1B, partial [Dictyostelium discoideum]
gi|739975|prf||2004272B rab1B gene
Length = 199
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KK+V T A+ +A+ +GI ETSAK + NVE+ FM + + + KK Q
Sbjct: 111 LVGNKCDLIEKKIVDTSTAREYADSVGIPFKETSAKSSANVEQAFMIMASEI---KKLQG 167
Query: 152 ERQVLNSDTVNIRKHTTKPGG------KKKC 176
Q N+ T N H KP G KKKC
Sbjct: 168 GIQPNNNSTYN--AHVVKPTGFTPIGKKKKC 196
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPG----- 55
+GI ETSAK + NVE+ FM + + + KK Q Q N+ T N H KP
Sbjct: 136 VGIPFKETSAKSSANVEQAFMIMASEI---KKLQGGIQPNNNSTYN--AHVVKPTGFTPI 190
Query: 56 GKKKVCTVL 64
GKKK C+++
Sbjct: 191 GKKKKCSII 199
>gi|296475820|tpg|DAA17935.1| TPA: ras-related protein Rab-3C [Bos taurus]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPAITAAKQNTRLKETPPPPQPNC 217
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 211
>gi|410948619|ref|XP_003981028.1| PREDICTED: ras-related protein Rab-3C [Felis catus]
Length = 227
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 200 ETDPAITAAKQNTRLKETPPPPQPNC 225
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 165 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NINV++ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q + + + + G KCC
Sbjct: 180 AEQSASHNVSIDQGSGSGAGLANKCC 205
>gi|38454238|ref|NP_942044.1| ras-related protein Rab-15 [Rattus norvegicus]
gi|464561|sp|P35289.1|RAB15_RAT RecName: Full=Ras-related protein Rab-15
gi|206537|gb|AAA41995.1| RAB15 [Rattus norvegicus]
gi|63102340|gb|AAH94954.1| RAB15, member RAS oncogene family [Rattus norvegicus]
gi|149051505|gb|EDM03678.1| rCG61451, isoform CRA_b [Rattus norvegicus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+VV T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 174
>gi|344283301|ref|XP_003413410.1| PREDICTED: ras-related protein Rab-3D-like [Loxodonta africana]
Length = 371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 284 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 343
Query: 152 E 152
E
Sbjct: 344 E 344
>gi|198436228|ref|XP_002119506.1| PREDICTED: similar to Rab3 [Ciona intestinalis]
Length = 220
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 82 YCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
Y W + + LVGNK D ++V+ TE ++ A+Q+G + FETSAKDN+NV+++F + +
Sbjct: 123 YSWD-NAQVTLVGNKCDMEDERVISTERGKQLADQLGFEFFETSAKDNVNVKQVFERLVD 181
Query: 142 LV 143
L+
Sbjct: 182 LI 183
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G + FETSAKDN+NV+++F + +L+
Sbjct: 157 LGFEFFETSAKDNVNVKQVFERLVDLI 183
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R S+K+
Sbjct: 121 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ 180
Query: 150 QKERQVLN----SDTVNIRKHTTKPGGKKKCC 177
ERQ + ++ VNI+ T+ K +CC
Sbjct: 181 MSERQESDMSPSNNVVNIQVQPTENKPKMQCC 212
>gi|301756687|ref|XP_002914198.1| PREDICTED: ras-related protein Rab-15-like [Ailuropoda melanoleuca]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ FA +GI ETSAK++INVEE F+ +++
Sbjct: 118 LVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSS 167
>gi|359320132|ref|XP_003639268.1| PREDICTED: ras-related protein Rab-15 [Canis lupus familiaris]
Length = 204
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 103 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 162
Query: 145 RSKKEQ 150
++ +++
Sbjct: 163 QAHRKE 168
>gi|344272308|ref|XP_003407975.1| PREDICTED: ras-related protein Rab-3C-like [Loxodonta africana]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPTITAAKQNTRLKETPPPPQPNC 217
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPTITAAKQNTRLKETPP 211
>gi|74182584|dbj|BAE34652.1| unnamed protein product [Mus musculus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTGLVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V E A+ FA+++GI ETSAKD NVE+ FMA+ ++++ +
Sbjct: 118 LVGNKSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMA-ASIKNRMASQ 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TVNI + KP G+ C
Sbjct: 177 PANNARPPTVNI---SGKPVGQSSGC 199
>gi|262401001|gb|ACY66403.1| Ras-related protein Rab-1A [Scylla paramamosain]
Length = 132
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV + A+ +A+ +GI ETSAK+ NVE+ FM + ++++
Sbjct: 47 LVGNKCDLTHKKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMA-AEIKNRMGPP 105
Query: 152 ERQVLNSDTVNIRKHT---TKPGGKKKCC 177
S ++N+ K T T+PGG CC
Sbjct: 106 SGHQGTSPSLNVHKSTPVETQPGG--GCC 132
>gi|123492550|ref|XP_001326088.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121908997|gb|EAY13865.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L LVGNK D + V E+AQ A++MG FETSAK N++E+F +I + +
Sbjct: 113 LYLVGNKADLVDNRTVKLEEAQERADKMGALYFETSAKTGQNIDELFASIAERI-----K 167
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ V + VN +T GKKKCC
Sbjct: 168 SAEKPVDPNPDVNFPGGSTS-SGKKKCC 194
>gi|165377074|ref|NP_598811.3| ras-related protein Rab-15 [Mus musculus]
gi|338719887|ref|XP_003364076.1| PREDICTED: ras-related protein Rab-15-like [Equus caballus]
gi|74177394|dbj|BAE34591.1| unnamed protein product [Mus musculus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|432107936|gb|ELK32985.1| Ras-related protein Rab-15 [Myotis davidii]
Length = 204
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 103 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 162
Query: 145 RSKKEQ 150
++ +++
Sbjct: 163 QAHRKE 168
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ FA +GI ETSAK++INVEE F+ +++
Sbjct: 117 LVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSS 166
>gi|431904482|gb|ELK09865.1| Ras-related protein Rab-15 [Pteropus alecto]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|56790046|dbj|BAD82819.1| small GTPase EhRab1B [Entamoeba histolytica]
Length = 185
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K V TE A FA Q G++ FETSAK +INVE F+ + + K + K
Sbjct: 104 LIGNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQDI---KNQMK 160
Query: 152 ERQVLNSDTVNIR---KHTTKPGGKKKCC 177
E + D V I+ + +PG CC
Sbjct: 161 ETPRVTPDNVAIKPEVQQEPQPG----CC 185
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRS-KKEQ 150
L+GNKND + KVV TE + A+++GI ETSAKD+ NVE+ F+ I + +
Sbjct: 118 LIGNKNDMVESKVVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHT 177
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ S TV ++ + CC
Sbjct: 178 NANKTSGSGTVQMKGQPIQQNNGGGCC 204
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + + K CC
Sbjct: 185 DSRSEPQTIKINQQDPAANGGQAATKSACC 214
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V E A+ FA+++GI ETSAKD NVE+ FMA+ ++++ +
Sbjct: 110 LVGNKSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMA-ASIKNRMASQ 168
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TVNI + KP G+ C
Sbjct: 169 PANNARPPTVNI---SGKPVGQSSGC 191
>gi|344246106|gb|EGW02210.1| Ras-related protein Rab-15 [Cricetulus griseus]
Length = 140
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 39 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 98
Query: 145 RSKKEQ 150
++ +++
Sbjct: 99 QAHRKE 104
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+VGNK+D K+VV TE+ Q A Q G+ ETSA N NVEEMF A+
Sbjct: 119 IVGNKSDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMA 167
>gi|345793828|ref|XP_851045.2| PREDICTED: ras-related protein Rab-3C [Canis lupus familiaris]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R + P + C
Sbjct: 192 ETDPAITAAKQNTRLKESPPPAQPNC 217
>gi|148704501|gb|EDL36448.1| RAB15, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 114 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 173
Query: 145 RSKKEQ 150
++ +++
Sbjct: 174 QAHRKE 179
>gi|27734454|sp|Q8K386.1|RAB15_MOUSE RecName: Full=Ras-related protein Rab-15
gi|20380722|gb|AAH27769.1| RAB15, member RAS oncogene family [Mus musculus]
gi|112292989|dbj|BAF02872.1| Rab15 [Mus musculus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|351710032|gb|EHB12951.1| Ras-related protein Rab-3D [Heterocephalus glaber]
Length = 242
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED R AN +G + FE SAK+NINV+++F + +++ E
Sbjct: 155 LVGNKCDLEDERVVPTEDGWRLANDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 214
Query: 152 E 152
E
Sbjct: 215 E 215
>gi|871514|emb|CAA90079.1| small G protein [Pisum sativum]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + + K CC
Sbjct: 185 DSRSEPQTIKINQQDPAANGGQAATKSACC 214
>gi|417397209|gb|JAA45638.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 111 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 170
Query: 145 RSKKEQ 150
++ +++
Sbjct: 171 QAHRKE 176
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + +
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADS 184
Query: 151 KERQVLNSDTVNIR---KHTTKPGGKKKCC 177
RQ ++ I+ + + K CC
Sbjct: 185 DTRQEAQP-SITIKPADQSGNQAAAKSACC 213
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ 38
GI+ FETSAK N+NVEE+F +I + + + RQ
Sbjct: 151 YGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQ 188
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV E A+ FA+++GI ETSAK+ NVE+ FM + + + Q
Sbjct: 134 LVGNKCDVTNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMASQP 193
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ TV IR KP + C
Sbjct: 194 AANAVRPTTVPIRG---KPVNQSTTC 216
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAK+ INVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQP 177
Query: 152 ERQVLNSDTVNIR 164
TV IR
Sbjct: 178 AANNARPPTVQIR 190
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ F+ + +
Sbjct: 118 LVGNKSDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGGAA 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ++ VN+R G CC
Sbjct: 178 ENTAAKAN-VNLRGQNVSQGSSSSCC 202
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D P+ + V T DA FA + + ETSAK+ INVE+ FM + + K
Sbjct: 118 LVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQI---KASTA 174
Query: 152 ERQVLNSD-TVNIRKHTTKPGGKKKCC 177
Q ++S+ TVN + TK GG CC
Sbjct: 175 PMQSMSSNVTVNSTQPVTKSGG---CC 198
>gi|57101400|ref|XP_533913.1| PREDICTED: ras-related protein Rab-3D [Canis lupus familiaris]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D P+ + V T DA FA + + ETSAK+ INVE+ FM + + K
Sbjct: 117 LVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQI---KASTA 173
Query: 152 ERQVLNSD-TVNIRKHTTKPGGKKKCC 177
Q ++S+ TVN + TK GG CC
Sbjct: 174 PMQSMSSNVTVNSTQPVTKSGG---CC 197
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + + K CC
Sbjct: 185 DSKSEPQTIKINQQDPAANGGQAATKSACC 214
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + +
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
Query: 151 KERQVLNSDTVNIRKHTTKPGG----KKKCC 177
R T+ I + + G K CC
Sbjct: 185 DHRA--EPTTLKINQDSAAGAGEAANKSSCC 213
>gi|294879180|ref|XP_002768586.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239871257|gb|EER01304.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRS----- 146
LVGNK D K+ V TE+ Q A++ G+ FETSAK +NVE F AI V S
Sbjct: 139 LVGNKADMAAKRKVSTEEGQALADKYGMTFFETSAKSGLNVEAAFRAIAERVCESYDLLS 198
Query: 147 ---KKEQKERQVLNSDTVNI--RKHTTKP----GGKKKCC 177
+ E + +S+TV + R+ P ++KCC
Sbjct: 199 GVPSRAHHEGSLPSSNTVELSDRRGNGGPSVSGSDRRKCC 238
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINVE+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
Q S V I + G KCC
Sbjct: 180 SEQA-GSQGVTIDHQGSGAGNLGGKCC 205
>gi|440294759|gb|ELP87711.1| ras, putative [Entamoeba invadens IP1]
Length = 192
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 14 INVEEMFMAITNL--VLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVCTVLNECAWL- 70
IN E + ++I++ ++ + K+ + D + T G + V T+ +E +
Sbjct: 46 INNELIIVSISDTFPMMNNYNSVKDNYIKTCDGFVLMHSITSFGSFEAVKTLYDEIYEMR 105
Query: 71 GCGWMTICPIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNI 130
+ T PI+ C GNK+D + V T++A R A + I FETSAK N
Sbjct: 106 NLNFETHIPIVMC----------GNKSDLESDREVPTDEANRVAQFLDIHFFETSAKSNT 155
Query: 131 NVEEMFMAITNLVLRSKKEQK-ERQVLNSDT 160
N++EMF+ + V R+K +Q+ E+Q N T
Sbjct: 156 NIKEMFIGLLQDVQRNKTKQRNEKQSSNKHT 186
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK-ERQVLNSDT 44
+ I FETSAK N N++EMF+ + V R+K +Q+ E+Q N T
Sbjct: 142 LDIHFFETSAKSNTNIKEMFIGLLQDVQRNKTKQRNEKQSSNKHT 186
>gi|395512525|ref|XP_003760488.1| PREDICTED: ras-related protein Rab-3D [Sarcophilus harrisii]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED + A+ +G + FE SAKDNINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVSTEDGKHLADDLGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|54020751|ref|NP_001005621.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257746|gb|AAH74589.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ ED ++ A ++G + FE SAKDNINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDDRVIPAEDGRKLAEELGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 191
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKC 176
E + S T + + K C
Sbjct: 192 ENGPVPSGTAQLSESAPKEHSNCSC 216
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTK 53
+G + FE SAKDNINV+++F + +++ E E + S T + + K
Sbjct: 157 LGFEFFEASAKDNINVKQVFERLVDIICEKMNESLENGPVPSGTAQLSESAPK 209
>gi|224032279|gb|ACN35215.1| unknown [Zea mays]
Length = 116
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 26 LVGNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSK 81
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 51 VGIPFLETSAKESINVEEAFLAMSAAIKKSK 81
>gi|148704500|gb|EDL36447.1| RAB15, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 74 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 133
Query: 145 RSKKEQ 150
++ +++
Sbjct: 134 QAHRKE 139
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----- 145
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + +
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKDIKQRLSES 184
Query: 146 -SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
SK E + ++ SD + T G +K C
Sbjct: 185 DSKTEPQSIRINQSD----QAGTAGQGAQKSSC 213
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLR------SKKEQKERQVLNSDTVNIRKHTTKP 54
GI+ FETSAK N+NVEE+F +I + + SK E + ++ SD + T
Sbjct: 151 YGIKFFETSAKTNLNVEEVFFSIGKDIKQRLSESDSKTEPQSIRINQSD----QAGTAGQ 206
Query: 55 GGKKKVC 61
G +K C
Sbjct: 207 GAQKSSC 213
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 18/94 (19%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +KKVV + + A++ GI+ ETSAK++INVEE F+++ K+ K
Sbjct: 125 LIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLA-------KDIK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGG--------KKKCC 177
+R + DT N + +PG KK CC
Sbjct: 178 KRMI---DTPNEQPQVVQPGTNLGANNNKKKACC 208
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 17/67 (25%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPG------ 55
GI+ ETSAK++INVEE F+++ K+ K+R + DT N + +PG
Sbjct: 151 GIKFLETSAKNSINVEEAFISLA-------KDIKKRMI---DTPNEQPQVVQPGTNLGAN 200
Query: 56 -GKKKVC 61
KKK C
Sbjct: 201 NNKKKAC 207
>gi|414587081|tpg|DAA37652.1| TPA: ypt-like protein [Zea mays]
Length = 151
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 61 LVGNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSK 116
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 86 VGIPFLETSAKESINVEEAFLAMSAAIKKSK 116
>gi|410902478|ref|XP_003964721.1| PREDICTED: ras-related protein Rab-26-like [Takifugu rubripes]
Length = 238
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED +R A + G+ ETSA+ +N++ F A+ KE
Sbjct: 155 LMLLGNKADAAQERVVKREDGERLAKEFGVPFMETSARSGLNIDLAFTAVA-------KE 207
Query: 150 QKERQVLN-SDTVNIRKHTTKPGGKKKCC 177
K R + + S+T ++++ K CC
Sbjct: 208 LKHRSLKDPSETFKLQEYVDKEMKSSGCC 236
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q A+++GI E SAK NIN+++ F ++ + + +
Sbjct: 120 LIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNS 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ ++ VN+ + GG KCC
Sbjct: 180 KNDQPSASGVNVGDKS--EGGGSKCC 203
>gi|67473056|ref|XP_652309.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469142|gb|EAL46923.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790050|dbj|BAD82821.1| small GTPase EhRab8B [Entamoeba histolytica]
gi|407038167|gb|EKE38969.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449704512|gb|EMD44743.1| small GTPase EhRab8B, putative [Entamoeba histolytica KU27]
Length = 207
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK+D Q +V+ TE Q A+++GI ETSA N NV++MFM + +L + +
Sbjct: 121 LILIGNKSDLEQNRVISTEQGQELADKLGIPFLETSAASNSNVKKMFMTLVEDILNGRSQ 180
Query: 150 QKERQVLNSDTVNIRK-HTTKPGGKKKCC 177
+ ++ V + K + + G+ CC
Sbjct: 181 GS--NIRSTQRVAVSKTNESSQEGQSGCC 207
>gi|74145385|dbj|BAE36145.1| unnamed protein product [Mus musculus]
Length = 225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK D ++VV TE QR Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 138 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 198 ETDPAITAAKQSTRLKETPPPPQPNC 223
>gi|410962507|ref|XP_003987810.1| PREDICTED: ras-related protein Rab-15 [Felis catus]
Length = 193
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 92 PEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVL 151
Query: 145 RSKKEQ 150
++ +++
Sbjct: 152 QAHRKE 157
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NINVE+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTNK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
Q S V I G KCC
Sbjct: 180 SEQA-GSQGVTIDHQGAGQGNLGGKCC 205
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K++V T+ + A + GI+ FETSAK NIN+E+ FM + +LR +
Sbjct: 119 LIGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKD 178
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
S V R ++ G K +CC
Sbjct: 179 SGPEAGSVAVG-RDQSS--GFKPRCC 201
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLR 29
GI+ FETSAK NIN+E+ FM + +LR
Sbjct: 145 GIRFFETSAKANINIEKAFMTLAEDILR 172
>gi|291413630|ref|XP_002723073.1| PREDICTED: RAB15, member RAS onocogene family-like [Oryctolagus
cuniculus]
Length = 415
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V E Q+ A + G+ +ETSA N+N++E F +T LVL
Sbjct: 315 PEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVL 374
Query: 145 RSKKEQ 150
++ +++
Sbjct: 375 QAHRKE 380
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L + GNK D +++ V E+A+ +A Q+G F TSAK N+NVEEMF+ +T +++ +
Sbjct: 118 LAIAGNKVDLEKERNVTIEEAEEYAKQVGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQ 177
Query: 150 QKERQVL 156
Q+++ L
Sbjct: 178 QEQKSTL 184
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVL 40
+G F TSAK N+NVEEMF+ +T +++ +Q+++ L
Sbjct: 145 VGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQQEQKSTL 184
>gi|410950474|ref|XP_003981930.1| PREDICTED: ras-related protein Rab-3D [Felis catus]
Length = 219
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NINVE+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
Q S V I G KCC
Sbjct: 180 SEQA-GSQGVTIDHQGAGQGNLGGKCC 205
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K+VV TE + FA+ +GI+ ETSAK + NVE+ F+ + + + K Q
Sbjct: 118 LVGNKSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARMKTQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + + K+ CC
Sbjct: 178 SAAGAQAGKGGVSLRSQQVKNKEGCC 203
>gi|301771968|ref|XP_002921400.1| PREDICTED: ras-related protein Rab-3D-like [Ailuropoda melanoleuca]
gi|281337382|gb|EFB12966.1| hypothetical protein PANDA_010292 [Ailuropoda melanoleuca]
Length = 219
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|13470090|ref|NP_076341.1| ras-related protein Rab-3C [Mus musculus]
gi|51338595|sp|P62824.1|RAB3C_RAT RecName: Full=Ras-related protein Rab-3C
gi|51338605|sp|P62823.1|RAB3C_MOUSE RecName: Full=Ras-related protein Rab-3C
gi|12597437|gb|AAG60047.1|AF312037_1 small GTP binding protein Rab3C [Mus musculus]
gi|1304207|dbj|BAA11302.1| rab3C [Rattus norvegicus]
gi|12851806|dbj|BAB29172.1| unnamed protein product [Mus musculus]
gi|13027787|gb|AAK08980.1| small GTP-binding protein Rab3C [Mus musculus]
gi|13094065|emb|CAC32042.1| Rab3C [Mus musculus]
gi|26348082|dbj|BAC37689.1| unnamed protein product [Mus musculus]
gi|74216593|dbj|BAE37733.1| unnamed protein product [Mus musculus]
gi|74223648|dbj|BAE28694.1| unnamed protein product [Mus musculus]
gi|89130661|gb|AAI14336.1| RAB3C, member RAS oncogene family [Mus musculus]
gi|112292947|dbj|BAF02851.1| Rab3C [Mus musculus]
gi|148686488|gb|EDL18435.1| RAB3C, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149059322|gb|EDM10329.1| RAB3C, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 227
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK D ++VV TE QR Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 200 ETDPAITAAKQSTRLKETPPPPQPNC 225
>gi|397638366|gb|EJK73035.1| hypothetical protein THAOC_05368 [Thalassiosira oceanica]
Length = 224
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK+D +VV T + ++ A++ G+Q FETSA NVE MF A+ + R + ++
Sbjct: 122 LCGNKSDLEGDRVVPTSEGKKLADEYGVQFFETSALTGSNVEGMFTALATTIKRRRIDEY 181
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKC 176
E QV ++ ++ T GG +
Sbjct: 182 EAQVGSN---SVAAGTASVGGASRA 203
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
G+Q FETSA NVE MF A+ + R + ++ E QV ++ ++ T GG +
Sbjct: 148 GVQFFETSALTGSNVEGMFTALATTIKRRRIDEYEAQVGSN---SVAAGTASVGGASRA 203
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 VGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + + V E A+ FA+++GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGNKSDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR +P +K C
Sbjct: 178 AGNNARPPTVQIRG---QPMAQKNGC 200
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 VGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|395850861|ref|XP_003797992.1| PREDICTED: ras-related protein Rab-3D [Otolemur garnettii]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R AN +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLANDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKK- 148
LVGNK D + V T+DA +A G+ ETSA + +NVEE F I + R SKK
Sbjct: 129 LVGNKTDLKHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKA 188
Query: 149 --EQKERQ----VLNSDTVNIRKHTTKPGGKKKCC 177
+++R V T+N+ + G KK+CC
Sbjct: 189 VASEEDRAAAAGVKEGKTINVAATASDGGEKKQCC 223
>gi|149059323|gb|EDM10330.1| RAB3C, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK D ++VV TE QR Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 138 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 198 ETDPAITAAKQSTRLKETPPPPQPNC 223
>gi|148686490|gb|EDL18437.1| RAB3C, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK D ++VV TE QR Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 138 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 197
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 198 ETDPAITAAKQSTRLKETPPPPQPNC 223
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D KV+ TE+ Q A++ G++ +ETSAK+NINVE F+ I V + +
Sbjct: 138 LIGNKCDMMDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREV--KNRLME 195
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E +++N+ P KK CC
Sbjct: 196 EGGSHKKESINLSAKAIPP--KKGCC 219
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D + + V T AQ +A ++GI ETSAK++INVEE F+A++ + +SK
Sbjct: 118 LVGNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSK 31
+GI ETSAK++INVEE F+A++ + +SK
Sbjct: 143 VGIPFLETSAKESINVEEAFLAMSAAIKKSK 173
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 118 LVGNKCDLTENKVVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMA 166
>gi|57863915|gb|AAS88841.2| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
gi|215692920|dbj|BAG88340.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 114
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ FA +GI ETSAK++INVEE F+ +++
Sbjct: 26 LVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSS 75
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q L + + + + CC
Sbjct: 185 DSKTEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK+D K+ V TE+A+ FA+ +GI+ ETSAK+ NVE+ FM + + + K Q
Sbjct: 118 LVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQ 176
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++ V + A+ FA+++GI ETSAKD+ NVE+ FMA+ + S K++
Sbjct: 118 LVGNKCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMAS----SIKDRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G K CC
Sbjct: 174 ASQPTNNARPPTVQIRGQPV--GQKSGCC 200
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS---DTVNIRKHTTKPGGK 57
+GI ETSAKD+ NVE+ FMA+ + S K++ Q N+ TV IR +P G+
Sbjct: 143 IGIPFMETSAKDSTNVEQAFMAMAS----SIKDRMASQPTNNARPPTVQIRG---QPVGQ 195
Query: 58 KKVC 61
K C
Sbjct: 196 KSGC 199
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q AN+ GI+ FETSAK NVEE F AI + R +E
Sbjct: 126 LVGNKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEES 185
Query: 151 K 151
+
Sbjct: 186 E 186
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q AN+ GI+ FETSAK NVEE F AI + R +E
Sbjct: 126 LVGNKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEES 185
Query: 151 K 151
+
Sbjct: 186 E 186
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISET 184
Query: 151 KERQVLNSDTVNIRKHTTKPG---GKKKCC 177
R + +N G K CC
Sbjct: 185 DSRAEPQTIRINQPDQAANGGQAAQKSACC 214
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKER 37
GI+ FETSAK N+NVEE+F +I + + E R
Sbjct: 151 YGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSR 187
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKAEPQTIRINQPDQAAGAAQSAQKSACC 214
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VVL ++ A + I+ FETSAK NIN+E+ F+ + +L +
Sbjct: 119 LLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDIL------Q 172
Query: 152 ERQVLNSDTVNIRKHTTKPG-GKKKCC 177
+ V D N+ TT G G KKCC
Sbjct: 173 KTPVKEPDRENVDISTTGGGTGLKKCC 199
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ + + + Q
Sbjct: 118 LVGNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGSQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV ++ + K CC
Sbjct: 178 AASKSTGTTVQMKGQPIQQ--KNNCC 201
>gi|443692874|gb|ELT94379.1| hypothetical protein CAPTEDRAFT_193005 [Capitella teleta]
Length = 198
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D +++V ED +R A + G ETSAK +NVE FMAI R K +K
Sbjct: 117 LLGNKSDMTSERLVRREDGERLAKEYGTAFMETSAKTGLNVELAFMAIA----RDLKSRK 172
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
R+ N N+ ++ + K CC
Sbjct: 173 SRRP-NEPKFNVAEYVDQEKQKPSCC 197
>gi|440296599|gb|ELP89386.1| Ras family protein, partial [Entamoeba invadens IP1]
Length = 97
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
Query: 79 PIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMA 138
PII C GNK D ++V T+ + AN M IQ FETSAK++INVE +F A
Sbjct: 15 PIIIC----------GNKCDLELNRIVTTDKGETLANSMNIQFFETSAKNDINVENVFCA 64
Query: 139 ITNLVLRSKKE-QKERQVLN 157
+ VL+ K+ Q+ + LN
Sbjct: 65 LLKAVLKKKQSFQRAKNELN 84
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKE-QKERQVLN 41
M IQ FETSAK++INVE +F A+ VL+ K+ Q+ + LN
Sbjct: 43 MNIQFFETSAKNDINVENVFCALLKAVLKKKQSFQRAKNELN 84
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++ V + A+ FA+++GI ETSAKD+ NVE+ FMA+ + S K++
Sbjct: 118 LVGNKCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMAS----SIKDRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G K CC
Sbjct: 174 ASQPTNNARPPTVQIRGQPV--GQKSGCC 200
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNS---DTVNIRKHTTKPGGK 57
+GI ETSAKD+ NVE+ FMA+ + S K++ Q N+ TV IR +P G+
Sbjct: 143 IGIPFMETSAKDSTNVEQAFMAMAS----SIKDRMASQPTNNARPPTVQIRG---QPVGQ 195
Query: 58 KKVC 61
K C
Sbjct: 196 KSGC 199
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLAET 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKAEPQTIKINQPDQAASGGQAAQKSACC 214
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R S+K+
Sbjct: 121 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ 180
Query: 150 QKERQVLN----SDTVNIRKHTTKPGGKKKCC 177
ERQ + ++ VNI+ T+ K +CC
Sbjct: 181 MSERQESDMSPSNNVVNIQVPPTENKPKMQCC 212
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T + Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIA 174
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AANNARPPTVQIRGQPVNQ--KSGCC 201
>gi|115461619|ref|NP_001054409.1| Os05g0105200 [Oryza sativa Japonica Group]
gi|113577960|dbj|BAF16323.1| Os05g0105200, partial [Oryza sativa Japonica Group]
Length = 116
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ FA +GI ETSAK++INVEE F+ +++
Sbjct: 28 LVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSS 77
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + ++ K CC
Sbjct: 185 DSKAEPQTIRINQPDQAAGASQSVQKSACC 214
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 1 MGIQLFETSAKDNINVEEMFMAIT 24
GI+ FETSAK N+NVEE+F +I
Sbjct: 151 YGIKFFETSAKTNMNVEEVFFSIA 174
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKAEPQTIKINQPDQAGGANQAAQKSACC 214
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + VLTE+A+ FA + G+ ETSA D+ NV+ F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTVNIRKHTTKP----------GGKKKCC 177
R D IR H +P G +K+CC
Sbjct: 181 IRDPPEGDV--IRPHNVEPIDVKPTMNTDGVRKQCC 214
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKSEPQTIKINQPDQGAGAAQAAQKSACC 214
>gi|1045640|gb|AAC52704.1| rab3c, partial [Rattus norvegicus]
Length = 195
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L GNK D ++VV TE QR Q+G + FETSAKDNINV++ F + +++
Sbjct: 117 LAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDII 168
>gi|388518593|gb|AFK47358.1| unknown [Medicago truncatula]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKSEPQTIKINQPDQGAGAAQAAQKSACC 214
>gi|334326343|ref|XP_001364610.2| PREDICTED: hypothetical protein LOC100011001 [Monodelphis
domestica]
Length = 510
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +VV TED + A+ +G + FE SAKDNINV+++F + +++ E
Sbjct: 423 LIGNKCDLEDDRVVSTEDGKHLADDLGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 482
Query: 152 E 152
E
Sbjct: 483 E 483
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I R K++
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA----RDIKQR 180
Query: 151 KERQVLNSDTVNIRKHTTKPGG------KKKCC 177
++ I+ + + GG K CC
Sbjct: 181 LADTDTKAEPSTIKINQDQSGGAGQAAQKSACC 213
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D +KVV A+ FA+++GI ETSAK+ NVE+ FM + N + K
Sbjct: 118 LVGNKSDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEI---KNRMA 174
Query: 152 ERQVLNSDTVNIRKHTTKPG------GKKKCC 177
+ +N+ R +T +PG K CC
Sbjct: 175 SQPQMNAGP---RGNTVRPGEGRSVNAKSSCC 203
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D P+KKVV + + A++ GI+ ETSAK++INVEE F+++ + + + K
Sbjct: 128 LIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKRIIDNK 187
Query: 152 ERQVLNSDT 160
+ V N T
Sbjct: 188 DELVSNPQT 196
>gi|206539|gb|AAA41996.1| RAB16 [Rattus norvegicus]
Length = 198
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED QR A +G + FE SAK+NINV+++F + +++ E
Sbjct: 111 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 170
Query: 152 E 152
E
Sbjct: 171 E 171
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----SK 147
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F ++ + + + SK
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASDIKKGMDTSK 179
Query: 148 KEQKERQVLNSD 159
EQ Q +N D
Sbjct: 180 TEQSGSQGVNID 191
>gi|241077|gb|AAB20687.1| synaptic vesicle specific GTP-binding protein [Discopyge ommata]
Length = 218
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK+D +VV TE+ +R A+++G + FE SAK+NINV+++F + +++
Sbjct: 132 LVGNKSDLEDNRVVPTEEGKRLADELGFEFFEASAKENINVKQVFERLVDII 183
>gi|167376138|ref|XP_001733878.1| GTP-binding protein ypt2 [Entamoeba dispar SAW760]
gi|165904897|gb|EDR30030.1| GTP-binding protein ypt2, putative [Entamoeba dispar SAW760]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK+D Q +V+ TE Q A+++GI ETSA N NV++MFM + +L + +
Sbjct: 121 LILIGNKSDLEQNRVISTEQGQELADKLGIPFLETSAASNSNVKKMFMTLVEDILNGRNQ 180
Query: 150 QKERQVLNSDTVNIRK-HTTKPGGKKKCC 177
+ ++ V + K + + G+ CC
Sbjct: 181 GG--NIRSTQRVAVSKSNESSQEGQSGCC 207
>gi|1370192|emb|CAA98173.1| RAB8B [Lotus japonicus]
Length = 187
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NV+E+F +I + +
Sbjct: 96 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADN 155
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q L + + + + K CC
Sbjct: 156 DSKAEPQTLKINQPDQGAGSAQAAPKSACC 185
>gi|420274|pir||G42148 GTP-binding protein rab16 - rat
Length = 198
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED QR A +G + FE SAK+NINV+++F + +++ E
Sbjct: 111 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 170
Query: 152 E 152
E
Sbjct: 171 E 171
>gi|327262966|ref|XP_003216293.1| PREDICTED: ras-related protein Rab-3C-like [Anolis carolinensis]
Length = 219
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++V+ T+ + A Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEEERVISTDRGKHLAEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P + C
Sbjct: 192 ETDPAIAAGKQNTRLKDTPPPQQPNC 217
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQ-VLNSDTVNIRKHTTKP 54
+G + FETSAKDNINV++ F + +++ E E + + N R T P
Sbjct: 157 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAIAAGKQNTRLKDTPP 211
>gi|50582491|dbj|BAD32700.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++VV TE ++ A+Q+G++ FETSAK+NINV+ +F + +++ E
Sbjct: 132 LVGNKCDLEEERVVSTERGKQLADQLGLEFFETSAKENINVKAVFERLVDIICEKMSESL 191
Query: 152 ERQ--VLNSDTVNIRKHTTKPGGKKKCC 177
+ ++NS T R T P + C
Sbjct: 192 DTDPTLVNSQTKGTR-LTENPNPQNGSC 218
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINVE+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
Q S V I + G KCC
Sbjct: 180 SEQA-GSQGVTIDHQGSGVGNLGGKCC 205
>gi|338712949|ref|XP_001498076.3| PREDICTED: ras-related protein Rab-26 [Equus caballus]
Length = 190
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ FMAI KE
Sbjct: 106 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFMAIA-------KE 158
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 159 LKQRSMKAPGEPQFRLHDYVKREGRGASCC 188
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV + A+ FA GI ETSAK+ NVEE F+++ + + +
Sbjct: 120 LVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQ 179
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
E D V+I+ K+ TK GGKK C
Sbjct: 180 ETP--KPDEVDIKSKNKTKSGGKKSFC 204
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIR-KHTTKPGGKKK 59
GI ETSAK+ NVEE F+++ + + +E D V+I+ K+ TK GGKK
Sbjct: 145 YGIPFIETSAKNATNVEECFISMARDIKNRLADIQETP--KPDEVDIKSKNKTKSGGKKS 202
Query: 60 VC 61
C
Sbjct: 203 FC 204
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASDIKKGMDSSK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
Q S V+I + G KCC
Sbjct: 180 PEQT-GSQGVSIDNQASGLSGNAGGKCC 206
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V EDA+ +A + + ETSAK NINV E+F +LV R K +
Sbjct: 117 LVGNKCDLEGSRSVTKEDAEAYARSISVDYIETSAKSNINVSELF----DLVAR-KLPKT 171
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ +++ D V I + + G KK CC
Sbjct: 172 EKGLIDQDEVVI---SNRNGQKKGCC 194
>gi|432102521|gb|ELK30092.1| Ras-related protein Rab-26 [Myotis davidii]
Length = 190
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 106 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKMGLNVDLAFTAIA-------KE 158
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + ++ ++ + H + G + CC
Sbjct: 159 LKQRSMKSTSELHFQLHDYVKREGRRASCC 188
>gi|149755446|ref|XP_001489964.1| PREDICTED: ras-related protein Rab-3D-like [Equus caballus]
Length = 219
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TED +R A+ +G + FE SAK+N+NV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENVNVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVG+K D + V + A+ FA+Q+GI ETSAKD NVE+ FMA++ + Q
Sbjct: 118 LVGSKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR G K CC
Sbjct: 178 SANNGRPPTVQIRGQPV--GQKSGCC 201
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+GI ETSAKD NVE+ FMA++ + Q TV IR +P G+K
Sbjct: 143 IGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNGRPPTVQIRG---QPVGQKSG 199
Query: 61 C 61
C
Sbjct: 200 C 200
>gi|355714923|gb|AES05162.1| RAB3D, member RAS oncoprotein family [Mustela putorius furo]
Length = 201
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV TED +R A+ +G + FE SAK+NINV+++F + +++
Sbjct: 115 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVI 166
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + GI+ ETSAK NIN+E F + +L R
Sbjct: 119 ILGNKCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ER V++ R++ K G KCC
Sbjct: 179 SAENPERVVID------RRNNDKAPGYNKCC 203
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVL-----RSKKEQKERQVLNSDTVNIRKHTTKPGG 56
GI+ ETSAK NIN+E F + +L R E ER V++ R++ K G
Sbjct: 145 GIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENPERVVID------RRNNDKAPG 198
Query: 57 KKKVCT 62
K C
Sbjct: 199 YNKCCA 204
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA+++GI ETSAK++ NVE+ FM + + + Q
Sbjct: 118 LVGNKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKRVASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV R K CC
Sbjct: 178 ASNATRPTTVPXRXXXXXQ--KSNCC 201
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NV+E+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAET 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q L + + + + K CC
Sbjct: 185 DSKTEPQTLKINQPDQGAGSAQATQKSACC 214
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK+ NVEE FMA+ + Q
Sbjct: 118 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AANNARPPTVQIRGQPVNQ--KSGCC 201
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NV+E+F +I + +
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADN 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q L + + + + K CC
Sbjct: 185 DSKAEPQTLKINQPDQGAGSAQAAQKSACC 214
>gi|218766458|gb|ACL11881.1| Ras-like GTP binding protein [Phytophthora cinnamomi]
Length = 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K+VV T+ A+ FA +GI+ ETSAK+ NVE+ FM + + KK
Sbjct: 7 LVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI---KKRMA 63
Query: 152 ERQVLNSDTVNIRKHTTKPG-GKKKCC 177
V V + P G KCC
Sbjct: 64 NAPVAPKAGVKLTPGQQVPSNGGSKCC 90
>gi|240281309|gb|EER44812.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINVE+ F + + + + K
Sbjct: 119 LIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTK 178
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
Q S V I + G KCC
Sbjct: 179 SEQA-GSQGVTIDHQGSGVGNLGGKCC 204
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KKVV T A+ +A+ GI ETSAK + NVE+ FM + + + + +
Sbjct: 118 LVGNKCDLIEKKVVETNVAREYADSAGIPFLETSAKSSANVEDAFMIMASEIKKLQGGIS 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
N +T ++ + P GKKK C
Sbjct: 178 TGGNTNYNTNVVKPSSGTPVGKKKRC 203
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI ETSAK + NVE+ FM + + + + + N +T ++ + P GKKK C
Sbjct: 144 GIPFLETSAKSSANVEDAFMIMASEIKKLQGGISTGGNTNYNTNVVKPSSGTPVGKKKRC 203
Query: 62 TVL 64
+L
Sbjct: 204 LIL 206
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 113 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQP 172
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 173 AMNTARPPTVQIRGQPVNQ--KSGCC 196
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I R K++
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA----RDIKQR 180
Query: 151 KERQVLNSDTVNIRKHTTKPGG------KKKCC 177
++ I+ + + GG K CC
Sbjct: 181 LADTDSKAEPSTIKINQDQSGGAGQAAQKSACC 213
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F I + L
Sbjct: 125 LVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQRLAES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + K K + CC
Sbjct: 185 DTKVEPQTIKINKPDPAKGPGKAAERSSCC 214
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
L+GNK D + V TEDAQ +A + G+ ETSA + +NVE+ F I + V R SKK
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKS 181
Query: 150 QKERQ------VLNSDTVNIRKHTTKPGGKKKCC 177
Q + T+++ T++ KK CC
Sbjct: 182 ISSDQTTANANIKEGQTIDV-AATSESNAKKPCC 214
>gi|123476120|ref|XP_001321234.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121904056|gb|EAY09011.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 73 GWMTICPIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINV 132
GW+ + C + + L+GNK D P ++++ DAQ FA+ G+ ETSAK NV
Sbjct: 100 GWLNDARTLCCQ--DAEIMLIGNKCDIPDQRLISLADAQNFADSRGLHYIETSAKTGQNV 157
Query: 133 EEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHT-TKPGGKKKCC 177
E F I + V+R + NS + RK T T KK CC
Sbjct: 158 REAFSRIASEVIRKLDK-------NSTDITGRKLTVTDDEPKKGCC 196
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+ V E A+ FA+++GI ETSAK+ +NVE+ FMA+ + Q
Sbjct: 118 LVGNKCDLADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AANNARPATVQIRGQPVDQ--KTSCC 201
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V E Q A+++GI E SAK NIN+EE F ++ N + + +
Sbjct: 120 LIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTS 179
Query: 152 ERQVL-NSDTVNIRKHTTKPGGKKKCC 177
++ S VN+ + + G KCC
Sbjct: 180 SKEASGGSSGVNVADN-SGSGSGGKCC 205
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K+VV T+ A+ FA +GI+ ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI---KKRMA 174
Query: 152 ERQVLNSDTVNIRKHTTKPG-GKKKCC 177
V V + P G KCC
Sbjct: 175 NAPVAPKAGVKLTPGQQVPSNGGSKCC 201
>gi|348550975|ref|XP_003461306.1| PREDICTED: ras-related protein Rab-3D-like [Cavia porcellus]
Length = 363
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 276 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 335
Query: 152 E 152
E
Sbjct: 336 E 336
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV + + FA+ +GI ETSAK+ NVEE FM + + + + Q
Sbjct: 118 LVGNKCDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
S TVN+ P K CC
Sbjct: 178 ALNTGKSGTVNVGGSQPIP-PKTGCC 202
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D P+ + V T DA FA + + ETSAK+ INVE+ FM + + K
Sbjct: 118 LVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQI---KASTA 174
Query: 152 ERQVLNSD-TVNIRKHTTKPGGKKKCC 177
Q + S+ TVN + TK GG CC
Sbjct: 175 PMQSMPSNVTVNSTQPVTKSGG---CC 198
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAK++ NVE+ FMA+ + Q
Sbjct: 118 LVGNKSDLTANKVVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIR 164
TV IR
Sbjct: 178 AMNNARPPTVQIR 190
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED QR A +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D DP ++ V T+ Q A++ GI+ FETSAK N N++E F +I + + E
Sbjct: 120 LIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAES 179
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ ++ ++ R + K CC
Sbjct: 180 EHDRLDVANGSKFRVDEAQEQSKDSCC 206
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V TE Q A++ GI+ FETSAK N NVE++F I + + E
Sbjct: 125 LVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVEDVFFTIARDIKQRLAES 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +N + P K+K C
Sbjct: 185 DAKAEPGNLRLNRPDTSRGPHKKEKSC 211
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRS--KKE 149
LVGNKND+PQ K+V DA+ A+ G++ E+SAK+ NVE++F I +L+ K+E
Sbjct: 142 LVGNKNDNPQLKMVPPRDAKAVADMHGMEFIESSAKECYNVEKVFTTIAKQILKQQLKEE 201
Query: 150 QKE 152
KE
Sbjct: 202 GKE 204
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ F+ + + K+
Sbjct: 118 LVGNKSDIADKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQI---KERMG 174
Query: 152 ERQVLNSDTVNIRKHT-TKPGGKKKCC 177
V N TV++++ T + G CC
Sbjct: 175 STTVNNKPTVSVQQGTGVQQGSAGGCC 201
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + GI+ ETSAK NIN+E F + +L R
Sbjct: 119 ILGNKCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ER V++ R ++ K G KCC
Sbjct: 179 SAENPERVVID------RANSDKAPGYNKCC 203
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVL-----RSKKEQKERQVLNSDTVNIRKHTTKPGG 56
GI+ ETSAK NIN+E F + +L R E ER V++ R ++ K G
Sbjct: 145 GIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENPERVVID------RANSDKAPG 198
Query: 57 KKKVCT 62
K C
Sbjct: 199 YNKCCA 204
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE ++ A+Q+G+Q FETSAK+NIN++ +F + +++
Sbjct: 178 LVGNKCDMEDERVITTERGKQLADQLGVQFFETSAKENINIKTVFEQLVDII 229
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK NVEE FMA+ + K +
Sbjct: 118 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q +N+ TVNIR K CC
Sbjct: 174 ATQPMNNARPPTVNIRGQPVNQ--KSGCC 200
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+VV T Q A++ GI+ FETSAK ++NVEE+F +I
Sbjct: 125 LVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLNVEEVFFSIA 174
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 174
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV A+ FA+ +GI ETSAKD+ NVE+ F+ + R KE+
Sbjct: 119 LVGNKCDITDKKVVEYTVAKEFADGLGIPFLETSAKDSTNVEQAFLTMA----RQIKERM 174
Query: 152 ERQVLNS----DTVNIRKHTTKPGGKKKCC 177
LN+ TV + + T CC
Sbjct: 175 SNSTLNTASSKTTVKVGQGTNVSQSSSGCC 204
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + GI+ ETSAK NIN+E F + +L R
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E +ER +++ R++ K G KCC
Sbjct: 179 SAENQERVIID------RRNQEKAPGYSKCC 203
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVL-----RSKKEQKERQVLNSDTVNIRKHTTKPGG 56
GI+ ETSAK NIN+E F + +L R E +ER +++ R++ K G
Sbjct: 145 GIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIID------RRNQEKAPG 198
Query: 57 KKKVCT 62
K C
Sbjct: 199 YSKCCA 204
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E L + + ++ K CC
Sbjct: 185 DSKAEPSTLKINQPDAGAGGSQAAQKSACC 214
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + GI+ ETSAK N N+EE F + +L R
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E +ER +++ R++ K G KCC
Sbjct: 179 SAENQERVIID------RRNNDKAPGYNKCC 203
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVL-----RSKKEQKERQVLNSDTVNIRKHTTKPGG 56
GI+ ETSAK N N+EE F + +L R E +ER +++ R++ K G
Sbjct: 145 GIRFMETSAKSNTNIEEAFCELAQAILDKTSGRESAENQERVIID------RRNNDKAPG 198
Query: 57 KKKVCT 62
K C
Sbjct: 199 YNKCCA 204
>gi|380020626|ref|XP_003694183.1| PREDICTED: ras-related protein Rab-3-like [Apis florea]
Length = 228
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE ++ A+Q+G+Q FETSAK+NIN++ +F + +++
Sbjct: 136 LVGNKCDMEDERVITTERGKQLADQLGVQFFETSAKENINIKTVFEQLVDII 187
>gi|301620509|ref|XP_002939609.1| PREDICTED: ras-related protein Rab-37-like [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNKND +++ TED + A + G+ ETSAK +NVE F+A+ KE K
Sbjct: 137 LLGNKNDMDAARIIETEDGESLAKEYGVPFMETSAKSGVNVELAFLAVA-------KELK 189
Query: 152 ERQVLNSD-TVNIRKHTTKPGGKKKCC 177
ER + + + I + K CC
Sbjct: 190 ERASVKEERSFQIHNYIDSKKKKDNCC 216
>gi|167389306|ref|XP_001738908.1| GTP-binding protein YPT31/YPT8 [Entamoeba dispar SAW760]
gi|165897661|gb|EDR24746.1| GTP-binding protein YPT31/YPT8, putative [Entamoeba dispar SAW760]
Length = 196
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L +VGNK+D + V T++ + FA++ +E SA + NV E+F IT + S+ +
Sbjct: 109 LCIVGNKSDLEASRQVSTDEGKEFASKKNAMFYEVSAMNGKNVTELFTEITRKIKSSQPQ 168
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + +SD VN+ +T+P KK C
Sbjct: 169 KPQGGLSSSDNVNVATASTQPTKKKGFC 196
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 5 LFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
+E SA + NV E+F IT + S+ ++ + + +SD VN+ +T+P KK C
Sbjct: 140 FYEVSAMNGKNVTELFTEITRKIKSSQPQKPQGGLSSSDNVNVATASTQPTKKKGFC 196
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-RSKK 148
L LVGNK DD + + V T+ + A ++GI E SAK ++NV E+F + L+L ++
Sbjct: 120 LFLVGNKCDDEESRQVSTKQGELLAQELGIPFMEASAKSSVNVSEVFYKLAGLILEKTSD 179
Query: 149 EQKERQVLNSDTVNIRK--HTTKPGGKKKCC 177
E+ + V++R+ HT G CC
Sbjct: 180 EEAASEQSQKGNVDVRQAGHTVSXSG---CC 207
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 122 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQP 181
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 182 AMNTARPPTVQIRGQPVNQ--KSGCC 205
>gi|66514595|ref|XP_623213.1| PREDICTED: ras-related protein Rab-3 isoform 2 [Apis mellifera]
Length = 269
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE ++ A+Q+G+Q FETSAK+NIN++ +F + +++
Sbjct: 177 LVGNKCDMEDERVITTERGKQLADQLGVQFFETSAKENINIKTVFEQLVDII 228
>gi|340729787|ref|XP_003403177.1| PREDICTED: ras-related protein Rab-3-like [Bombus terrestris]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE ++ A+Q+G+Q FETSAK+NIN++ +F + +++
Sbjct: 178 LVGNKCDMEDERVITTERGKQLADQLGVQFFETSAKENINIKTVFEQLVDII 229
>gi|327265053|ref|XP_003217323.1| PREDICTED: ras-related protein Rab-37-like [Anolis carolinensis]
Length = 232
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L+GNK D ++VV TED + A + G+ ETSAK +NVE F+AI KE
Sbjct: 147 IMLLGNKADVSSERVVRTEDGEALAREYGVPFMETSAKTGMNVELAFLAIA-------KE 199
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKK--CC 177
K+R + + + H KK+ CC
Sbjct: 200 LKQRALFQPEEPRFQIHDYIESQKKRSSCC 229
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NINVE+ F + + + R K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTK 179
Query: 152 ERQV 155
Q
Sbjct: 180 SEQA 183
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ AN++GI E SAK+NINVE+ F + + + R K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTK 179
Query: 152 ERQV 155
Q
Sbjct: 180 SEQA 183
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NINV++ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTSK 179
Query: 152 ERQVLNSDTVNIRKHT-TKPGGKKKCC 177
Q S V+I + T + G KCC
Sbjct: 180 AEQSA-SHNVSIDQGTGSGTGLANKCC 205
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ LVGNK+D K V T+DA FA G+ ETSA DN NVEE F +I + + R
Sbjct: 126 IMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYR 181
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK+D +K++V E+AQ +A G+ ETSAK +NV E+F+AI + +S +
Sbjct: 127 IALAGNKSDLAEKRMVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQ 186
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
N VN++ +P + CC
Sbjct: 187 NPTHAARNRG-VNVQGSEQQP--RSGCC 211
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|357472677|ref|XP_003606623.1| Small GTP-binding protein [Medicago truncatula]
gi|355507678|gb|AES88820.1| Small GTP-binding protein [Medicago truncatula]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 127 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 176
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----SK 147
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F + + + + SK
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASAIKKGMDTSK 179
Query: 148 KEQKERQVLNSD 159
EQ Q +N D
Sbjct: 180 SEQAGPQGVNID 191
>gi|15242773|ref|NP_195972.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|75181251|sp|Q9LZD4.1|RAE1D_ARATH RecName: Full=Ras-related protein RABE1d; Short=AtRABE1d; AltName:
Full=Ras-related protein Rab8C; Short=AtRab8C
gi|7378637|emb|CAB83313.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|14334902|gb|AAK59629.1| unknown protein [Arabidopsis thaliana]
gi|15810625|gb|AAL07200.1| unknown protein [Arabidopsis thaliana]
gi|332003234|gb|AED90617.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE +FM+I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIA 174
>gi|426238492|ref|XP_004013187.1| PREDICTED: ras-related protein Rab-37 [Ovis aries]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R L +D + IR + + CC
Sbjct: 186 YRAGLQADEPSFQIRDYVESQKKRPSCC 213
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI 173
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI 173
>gi|79326857|ref|NP_001031827.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|332003235|gb|AED90618.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----- 145
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE +FM+I + +
Sbjct: 115 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTET 174
Query: 146 -SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+K E + ++ DT ++ K CC
Sbjct: 175 DTKAEPQGIKITKQDTA----ASSSTAEKSACC 203
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|326917578|ref|XP_003205074.1| PREDICTED: ras-related protein Rab-10-like [Meleagris gallopavo]
Length = 248
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++VV ++ A + GI FETSAKDN+N+E+ F +T +L E+K
Sbjct: 170 LLGNKCDKESERVVPKHKGEKLAWEHGIPFFETSAKDNVNIEDAFSVLTKEIL----EKK 225
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + D V++ + K+ CC
Sbjct: 226 SWVLYDLDVVDLNESK-----KRTCC 246
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI FETSAKDN+N+E+ F +T +L E+K + + D V++ + KK+ C
Sbjct: 196 GIPFFETSAKDNVNIEDAFSVLTKEIL----EKKSWVLYDLDVVDLNE------SKKRTC 245
Query: 62 TVL 64
Sbjct: 246 CAF 248
>gi|306014151|gb|ADM76129.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014153|gb|ADM76130.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014155|gb|ADM76131.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014157|gb|ADM76132.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014159|gb|ADM76133.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014161|gb|ADM76134.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014163|gb|ADM76135.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014165|gb|ADM76136.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014167|gb|ADM76137.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014169|gb|ADM76138.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014171|gb|ADM76139.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014173|gb|ADM76140.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014175|gb|ADM76141.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014177|gb|ADM76142.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014179|gb|ADM76143.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014181|gb|ADM76144.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014183|gb|ADM76145.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014185|gb|ADM76146.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014187|gb|ADM76147.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014189|gb|ADM76148.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014191|gb|ADM76149.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014193|gb|ADM76150.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014195|gb|ADM76151.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014197|gb|ADM76152.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014199|gb|ADM76153.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014201|gb|ADM76154.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014203|gb|ADM76155.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014205|gb|ADM76156.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014207|gb|ADM76157.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014209|gb|ADM76158.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014211|gb|ADM76159.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014213|gb|ADM76160.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014215|gb|ADM76161.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014217|gb|ADM76162.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014219|gb|ADM76163.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014221|gb|ADM76164.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014223|gb|ADM76165.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014225|gb|ADM76166.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014227|gb|ADM76167.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014229|gb|ADM76168.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014231|gb|ADM76169.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014233|gb|ADM76170.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014235|gb|ADM76171.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014237|gb|ADM76172.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014239|gb|ADM76173.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014241|gb|ADM76174.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 141
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F I + L
Sbjct: 50 LVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQRLAES 109
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + K K + CC
Sbjct: 110 DTKVEPQTIKINKPDPAKGPGKAAERSSCC 139
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 118 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMA 166
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV TE Q A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ S VN+ + G KCC
Sbjct: 180 KTDTGTSSGVNVGEKNDAASG--KCC 203
>gi|21592670|gb|AAM64619.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE +FM+I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIA 174
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+++GI ETSAK+ NVE+ FM + + K
Sbjct: 118 LVGNKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KNRMA 174
Query: 152 ERQVLNS----DTVNIRKHTTKPGGKKKCC 177
+ L+S + V +R T P G CC
Sbjct: 175 SQPALSSTSRPNNVQLRGQTILPKG--GCC 202
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK+D +K++V E+AQ +A G+ ETSAK +NV E+F+AI + +S
Sbjct: 127 IALAGNKSDLAEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDA- 185
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q ++ VN+ +P + CC
Sbjct: 186 QNPTHAAHNRGVNVHGSEQQP--RSGCC 211
>gi|355754356|gb|EHH58321.1| hypothetical protein EGM_08143, partial [Macaca fascicularis]
Length = 192
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 109 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 161
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 162 YRAGQQANEPSFQIRDYVESQKKRSSCC 189
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
L+GNK D + V TEDAQ +A + G+ ETSA + +NVE+ F I + + R SKK
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 150 QKERQ------VLNSDTVNIRKHTTKPGGKKKCC 177
Q + T+++ T++ KK CC
Sbjct: 182 ISSDQTTANASIKEGQTIDV-AATSESTAKKPCC 214
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FE SAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQRLAET 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + T+ K CC
Sbjct: 185 DSKTEPQTIKINQQEQGAGTSAASQKSACC 214
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q+ A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + VN+ + + G KCC
Sbjct: 180 KNEQPAASGVNVGEQS---GAGGKCC 202
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +KKVV + + A++ GI+ ETSAK+++NVEE F+ + K+ K
Sbjct: 125 LIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLA-------KDIK 177
Query: 152 ERQVLNSDTVNIRKHT--TKPGGKKKCC 177
+R + DT N HT P KK C
Sbjct: 178 KRMI---DTPNDPDHTICITPNNKKNTC 202
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 12/62 (19%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHT--TKPGGKKK 59
GI+ ETSAK+++NVEE F+ + K+ K+R + DT N HT P KK
Sbjct: 151 GIKFLETSAKNSVNVEEAFIGLA-------KDIKKRMI---DTPNDPDHTICITPNNKKN 200
Query: 60 VC 61
C
Sbjct: 201 TC 202
>gi|402900984|ref|XP_003913439.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Papio anubis]
Length = 196
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 113 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 165
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 166 YRAGQQANEPSFQIRDYVESQKKRSSCC 193
>gi|402900982|ref|XP_003913438.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Papio anubis]
Length = 223
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 193 YRAGQQANEPSFQIRDYVESQKKRSSCC 220
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI FETSAK N+NVE++F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIARDIKQRLSES 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + G +K C
Sbjct: 185 DSKPEGGTIKIKPEGEADAAGAQKSAC 211
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F +I
Sbjct: 125 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFSIA 173
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 125 LVGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 184
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ + KP G +K+CC
Sbjct: 185 IRDPPEGDTIRPQNVEQIEVKPTMNAEGVRKQCC 218
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
++GNK D K+VV TE ++ A + G+ FETSAK I+VEE F A+ + + K + K
Sbjct: 118 ILGNKCDMEDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSI-KQKMDSK 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK--KCC 177
E + +I K KP K CC
Sbjct: 177 EVSTPHEHEKDIIKPDNKPEPKSGGGCC 204
>gi|345313882|ref|XP_001506096.2| PREDICTED: ras-related protein Rab-3C-like [Ornithorhynchus
anatinus]
Length = 172
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L GNK D +++VV ++ +R Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 81 LAGNKCDMEEERVVSSDRGRRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESV 140
Query: 152 ERQVLNSDTVNIRKHTTK 169
E + K +T+
Sbjct: 141 EADPAIAAAAGAGKQSTR 158
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTK 53
+G + FETSAKDNINV++ F + +++ E E + K +T+
Sbjct: 106 LGFEFFETSAKDNINVKQTFERLVDIICDKMSESVEADPAIAAAAGAGKQSTR 158
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q+ A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEEKRVVSTEKGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + VN+ + + G KCC
Sbjct: 180 KNEQPTASGVNVGE---QGGAGGKCC 202
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV----LRSK 147
L+GNK+D +K+ V TE + A ++GI ETSAK N NVEE F + V + +
Sbjct: 119 LIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTA 178
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ S VN+ K GG CC
Sbjct: 179 AVTQASPAAASANVNVNS-APKTGGAGGCC 207
>gi|355568894|gb|EHH25175.1| hypothetical protein EGK_08953 [Macaca mulatta]
Length = 223
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 193 YRAGQQANEPSFQIRDYVESQKKRSSCC 220
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V E A+ FA+++GI ETSAKD NVE+ FMA+ + Q
Sbjct: 118 LVGNKCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AANNARPPTVQIRGQPVPQ--KNGCC 201
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NV+E+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAES 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q L + + + + CC
Sbjct: 185 DSKTEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
++GNK D+ K+ VL +A+ A I+ ETSAK NIN++ F+ + N +L +K K
Sbjct: 119 ILGNKVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDIL-NKMPGK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q S+T++I+ H+ +K+ C
Sbjct: 178 RSQA--SETISIQNHSRPNSNQKRGC 201
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
I+ ETSAK NIN++ F+ + N +L +K K Q S+T++I+ H+ +K+ C
Sbjct: 146 IRFMETSAKTNINIDAAFLGLANDIL-NKMPGKRSQA--SETISIQNHSRPNSNQKRGC 201
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK+D +K++V E+AQ +A G+ ETSAK +NV E+F+AI + +S +
Sbjct: 127 IALAGNKSDLAEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQ 186
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
N VN++ +P + CC
Sbjct: 187 NPTHGAHNRG-VNVQGSEQQP--RSGCC 211
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D DP ++ V T+ Q A++ GI+ FETSAK N N++E F +I + + E
Sbjct: 120 LIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLAES 179
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ ++ ++ R ++ K CC
Sbjct: 180 EHDRLDVANGSKFRVDESQDQTKDGCC 206
>gi|328875088|gb|EGG23453.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 172
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRS 146
LVGNK D +KVV T A+ +A+ GI ETSAK NVE++FM I N + R+
Sbjct: 100 LVGNKFDLDDRKVVSTTAAKEYADSQGIPFIETSAKTGFNVEQIFMTIANDIHRA 154
>gi|281205763|gb|EFA79952.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 493
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 81 IYCWLFPSGLR-LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
I+ + F R LVGNK D +KVV T + +A+ +GI E SAK NVE++F+ I
Sbjct: 104 IHRYAFAGVSRVLVGNKFDLDDRKVVSTTMVKEYADSLGIPFLEASAKTGFNVEQIFLTI 163
Query: 140 TNLVLR-----SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
N + + SK ER LN++ KKKCC
Sbjct: 164 ANEIYKLPTGLSKGTGGERLSLNTNQ------------KKKCC 194
>gi|388453587|ref|NP_001253537.1| ras-related protein Rab-37 [Macaca mulatta]
gi|383417977|gb|AFH32202.1| ras-related protein Rab-37 isoform 2 [Macaca mulatta]
Length = 223
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 193 YRAGQQANEPSFQIRDYVESQKKRSSCC 220
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVGNK D KKVV E A+ FA+ +GI+ ETSAK++ NVE FM + +++
Sbjct: 118 LVGNKADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQ 171
>gi|402900986|ref|XP_003913440.1| PREDICTED: ras-related protein Rab-37 isoform 3 [Papio anubis]
Length = 186
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 103 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 155
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q N + IR + + CC
Sbjct: 156 YRAGQQANEPSFQIRDYVESQKKRSSCC 183
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ LVGNK+D K V T+DA FA G+ ETSA DN NVEE F +I + + R
Sbjct: 119 IMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYR 174
>gi|348584804|ref|XP_003478162.1| PREDICTED: ras-related protein Rab-26-like [Cavia porcellus]
Length = 251
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK IN+E F AI KE
Sbjct: 167 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPYMETSAKTGINIELAFTAIA-------KE 219
Query: 150 QKER--QVLNSDTVNIRKHTTKPGGKKKCC 177
K+R + N + + + G CC
Sbjct: 220 LKQRITKAPNEPHFRLHDYVKRQGRGPSCC 249
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q+ A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + VN+ + + G KCC
Sbjct: 180 KNEQPAASGVNVGESSGSGG---KCC 202
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV TE + FA+ +GI+ ETSAK + NVE+ F+ + + + K Q
Sbjct: 118 LVGNKCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
V++R K CC
Sbjct: 178 SAAPATKPGVSLRSQQVKK--DSSCC 201
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ LVGNK+D K V T+DA FA G+ ETSA DN NVEE F +I + + R
Sbjct: 120 IMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYR 175
>gi|354467588|ref|XP_003496251.1| PREDICTED: ras-related protein Rab-3C-like [Cricetulus griseus]
Length = 228
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++++ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 141 LVGNKCDMEDERIISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 200
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 201 ETDPAITAAKQSTRLKETPPPPQPNC 226
>gi|196011170|ref|XP_002115449.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
gi|190582220|gb|EDV22294.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
Length = 222
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV + ++ A+Q+G FETSAKDNINV+ F + +++ E
Sbjct: 135 LVGNKCDREDERVVSIDRGKQLADQLGFPFFETSAKDNINVKSTFETLVDIICEKMSESL 194
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + + T +P + C
Sbjct: 195 DSDPTVVNPTKVTRITERPSQQDGSC 220
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKV 60
+G FETSAKDNINV+ F + +++ E + + + + T +P +
Sbjct: 160 LGFPFFETSAKDNINVKSTFETLVDIICEKMSESLDSDPTVVNPTKVTRITERPSQQDGS 219
Query: 61 C 61
C
Sbjct: 220 C 220
>gi|290999034|ref|XP_002682085.1| rab family small GTPase [Naegleria gruberi]
gi|284095711|gb|EFC49341.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 23/109 (21%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV-------- 143
L+GNK D +KK+V TE Q A GI ETSAK+NINVEE F I +
Sbjct: 127 LIGNKCDLIEKKIVETERGQSLAKSYGIPFMETSAKNNINVEEAFFTIAREIKSRLIDSG 186
Query: 144 -------------LRSKKEQKERQVLNSDTVNI--RKHTTKPGGKKKCC 177
+ E+++ + NS TV I ++T+ KK CC
Sbjct: 187 EVEPIVEDSSPSNTKKSTEEEKPKTSNSGTVRIDQNQNTSNEKKKKSCC 235
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KKVV T A+ FA+ +GI+ ETSAK + NVE+ F+ + + Q
Sbjct: 118 LVGNKNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ Q +S +++ + + CC
Sbjct: 178 QTQKTSSG-IHVGANAQEVKESSSCC 202
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D +++ V TE+AQRFA + + FETSAKD+ NV ++F AI
Sbjct: 124 IALAGNKADLEERRQVPTEEAQRFAEEENLLFFETSAKDSTNVTDIFTAIA 174
>gi|123482533|ref|XP_001323810.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944359|gb|AAY83815.1| small Rab GTPase Rab5a [Trichomonas vaginalis]
gi|121906682|gb|EAY11587.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLF-ETSAKDNINVEEMFMAITNLVLRSKK 148
+ L GNK+D Q++ V TEDAQ FA + GI +F ETSA IN++E+F + + R
Sbjct: 119 IALAGNKSDLDQQRCVATEDAQSFAQKHGIPIFKETSALKGINIQEIFTDVAVAIARGAV 178
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + N + KKKCC
Sbjct: 179 STAPAEQVTLTESNPKDK------KKKCC 201
>gi|344235947|gb|EGV92050.1| Ras-related protein Rab-3C [Cricetulus griseus]
Length = 220
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++++ TE Q Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 133 LVGNKCDMEDERIISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 192
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + + R T P + C
Sbjct: 193 ETDPAITAAKQSTRLKETPPPPQPNC 218
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ + KP G +K+CC
Sbjct: 181 IRDPPEGDTIRPQNVEQIEVKPTMNAEGMRKQCC 214
>gi|431918954|gb|ELK17821.1| Ras-related protein Rab-3D [Pteropus alecto]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|311248642|ref|XP_003123225.1| PREDICTED: ras-related protein Rab-3D-like [Sus scrofa]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TE+ +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDIICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ + KP G +K+CC
Sbjct: 181 IRDPPEGDTIRPHNVEQIEVKPTMNAEGMRKQCC 214
>gi|195609720|gb|ACG26690.1| ras-related protein ARA-3 [Zea mays]
gi|414591886|tpg|DAA42457.1| TPA: ras protein ARA-3 [Zea mays]
Length = 224
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F A+ V
Sbjct: 131 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMARDV 182
>gi|281201174|gb|EFA75388.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D ++VV E+ +RFA + I ETSAKDN NVE+ F T V++ KE K
Sbjct: 116 LIGNKSDHNDRRVVKVEEGERFARENNILFIETSAKDNTNVEKAFEDATRQVVKLIKEGK 175
>gi|432872022|ref|XP_004072078.1| PREDICTED: ras-related protein R-Ras-like [Oryzias latipes]
Length = 176
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 86 FPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
FP + LVGNK D Q++V+ +EDAQ FA + I E SAK+ NV+E+F+ + +++ R
Sbjct: 92 FP--MLLVGNKADLEQQRVISSEDAQAFARENRIHYMEASAKNRYNVDEVFLKLVHIIRR 149
>gi|297806315|ref|XP_002871041.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
gi|297316878|gb|EFH47300.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----- 145
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE +F++I + +
Sbjct: 115 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVENVFLSIAKDIKQRLTET 174
Query: 146 -SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+K E + ++ DT + ++ K CC
Sbjct: 175 DTKAEPQGIKITKQDTAS----SSSTAEKSACC 203
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D Q + V E+A+ FA+ G+ ETSA D+ NVEE F I + ++QK
Sbjct: 121 LVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQK 180
Query: 152 ERQVLNSDTVNIRKH---TTKP--GGKKKCC 177
+R S+TV++ +T P ++ CC
Sbjct: 181 QRSS-QSNTVSLASESPASTAPVQAERRPCC 210
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V T Q A++ GI+ FETSAK N+N+EE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNMEEVFFSIARDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + + K CC
Sbjct: 185 DSKSEPQTIKINQPDQGAGAAQAAQKSACC 214
>gi|410924594|ref|XP_003975766.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV ++ Q+ ++Q+G + FETSAKDNINV++ F + +++
Sbjct: 131 LVGNKCDMEDERVVASQRGQQLSDQLGFEFFETSAKDNINVKQTFERLVDII 182
>gi|403273311|ref|XP_003928462.1| PREDICTED: ras-related protein Rab-26 [Saimiri boliviensis
boliviensis]
Length = 256
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 172 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 224
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H ++ G + CC
Sbjct: 225 LKQRSMKAPSEPRFRLHDYVSREGHRASCC 254
>gi|195164155|ref|XP_002022914.1| GL16463 [Drosophila persimilis]
gi|194104976|gb|EDW27019.1| GL16463 [Drosophila persimilis]
Length = 223
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L +VGNK D +++ + EDA+++A +G Q E SAK+N V E+F +T L+L +
Sbjct: 122 LIIVGNKTDLEEQRAIGYEDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLML-ERLS 180
Query: 150 QKER--------QVLNSDTVNIRKHTTKPG-----GKKKCC 177
Q+ER ++ SD V++ + G G++ CC
Sbjct: 181 QRERDAEPPNLLRLDASDAVSVSEGEEGNGEDTGTGQRSCC 221
>gi|76779772|gb|AAI06309.1| Rab3d protein [Xenopus laevis]
Length = 217
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ ED ++ A ++G + FE SAKDNINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDDRVIAAEDGRKLAEELGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|302563381|ref|NP_001181198.1| ras-related protein Rab-3D [Macaca mulatta]
gi|332253338|ref|XP_003275802.1| PREDICTED: ras-related protein Rab-3D [Nomascus leucogenys]
gi|402904261|ref|XP_003914965.1| PREDICTED: ras-related protein Rab-3D [Papio anubis]
gi|380786233|gb|AFE64992.1| ras-related protein Rab-3D [Macaca mulatta]
gi|383414467|gb|AFH30447.1| ras-related protein Rab-3D [Macaca mulatta]
gi|384944474|gb|AFI35842.1| ras-related protein Rab-3D [Macaca mulatta]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + E
Sbjct: 139 LVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAES 198
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + ++N + +K C
Sbjct: 199 DSKPEDRTISINRPEGGEASASQKSAC 225
>gi|426387223|ref|XP_004060073.1| PREDICTED: ras-related protein Rab-3D [Gorilla gorilla gorilla]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D DP K+ V Q A++ GI+ FETSAK N+NVE++F I
Sbjct: 123 LVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTI 171
>gi|4759000|ref|NP_004274.1| ras-related protein Rab-3D [Homo sapiens]
gi|6093901|sp|O95716.1|RAB3D_HUMAN RecName: Full=Ras-related protein Rab-3D
gi|20379042|gb|AAM21081.1|AF498933_1 small GTP binding protein RAB3D [Homo sapiens]
gi|3859936|gb|AAC72918.1| GTP-binding protein [Homo sapiens]
gi|16741272|gb|AAH16471.1| RAB3D, member RAS oncogene family [Homo sapiens]
gi|119604595|gb|EAW84189.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119604596|gb|EAW84190.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|126308787|ref|XP_001378194.1| PREDICTED: ras-related protein Rab-37-like [Monodelphis domestica]
Length = 273
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +++VV +ED Q A + G+ ETSAK +NVE F+AI R K +
Sbjct: 189 LLGNKADVNRERVVRSEDGQTLAREYGVPFMETSAKTGMNVELAFLAIA----RELKHRA 244
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q N + I + + CC
Sbjct: 245 GQQQPNEPSFQIHDYVESQKKQPSCC 270
>gi|154422723|ref|XP_001584373.1| hypothetical protein [Trichomonas vaginalis G3]
gi|62736316|gb|AAX97487.1| small Rab GTPase RabX10 [Trichomonas vaginalis]
gi|121918620|gb|EAY23387.1| hypothetical protein TVAG_070500 [Trichomonas vaginalis G3]
Length = 196
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L LVGNK D K+ V ++A+ AN+MG+ L ETSAK +N+E+ F I+ +++
Sbjct: 114 LLLVGNKADLEDKRAVTEQEAKELANRMGLVLLETSAKTALNIEDAFKQISRQLIKEAAA 173
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + N + V++ K K KKCC
Sbjct: 174 KPKSD--NKNQVSLDK---KQSSGKKCC 196
>gi|15042957|ref|NP_114080.2| ras-related protein Rab-3D [Mus musculus]
gi|464569|sp|P35276.1|RAB3D_MOUSE RecName: Full=Ras-related protein Rab-3D
gi|9082184|gb|AAF82769.1|AF263365_1 Rab3D [Mus musculus]
gi|9082186|gb|AAF82770.1|AF263366_1 Rab3D [Mus musculus]
gi|200632|gb|AAA40026.1| GTP-binding protein [Mus musculus]
gi|14789745|gb|AAH10779.1| Rab3d protein [Mus musculus]
gi|18042808|gb|AAH20010.1| Rab3d protein [Mus musculus]
gi|26339304|dbj|BAC33323.1| unnamed protein product [Mus musculus]
gi|74142115|dbj|BAE41117.1| unnamed protein product [Mus musculus]
gi|112292949|dbj|BAF02852.1| Rab3D [Mus musculus]
gi|148693272|gb|EDL25219.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693273|gb|EDL25220.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693274|gb|EDL25221.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693275|gb|EDL25222.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693277|gb|EDL25224.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV ++ + A+Q+G+ ETSAK++ NVE+ F+ +++ + K
Sbjct: 118 LVGNKTDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +R G + CC
Sbjct: 178 QPNRSGAGAARLRPGQPAHGNQSGCC 203
>gi|26347277|dbj|BAC37287.1| unnamed protein product [Mus musculus]
Length = 124
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 37 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 96
Query: 152 E 152
E
Sbjct: 97 E 97
>gi|30583917|gb|AAP36207.1| Homo sapiens RAB3D, member RAS oncogene family [synthetic
construct]
gi|61370253|gb|AAX43463.1| RAB3D member RAS oncogene family [synthetic construct]
Length = 220
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV + A+ FA+++GI ETSAK+ NVEE FM + + K
Sbjct: 118 LVGNKSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKMAGEI---KNRMA 174
Query: 152 ERQVLNSDTVNIRKHTTKPG-------GKKKCC 177
+ LN+ + T +PG K CC
Sbjct: 175 SQPALNNGP---KGATVRPGEGRPVNANKSNCC 204
>gi|224090593|ref|XP_002187909.1| PREDICTED: ras-related protein Rab-3C [Taeniopygia guttata]
Length = 227
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + A Q+G + FETSAK+NINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVIFTERGKHLAEQLGFEFFETSAKENINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N + T P + C
Sbjct: 200 EMNPTIAASNQNTQLKDTPPPQQSNCS 226
>gi|114675473|ref|XP_001167816.1| PREDICTED: ras-related protein Rab-3D [Pan troglodytes]
gi|397520876|ref|XP_003830534.1| PREDICTED: ras-related protein Rab-3D [Pan paniscus]
gi|410257900|gb|JAA16917.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410303346|gb|JAA30273.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410329687|gb|JAA33790.1| RAB3D, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+ NVE+ F+ + + KK+
Sbjct: 121 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI---KKKMG 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + N++ K CC
Sbjct: 178 SQPTSSKSSGNVQMKGQPIQQKSSCC 203
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V T++A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T++ + +PG GK+ CC
Sbjct: 182 QNSTRTNAITLSSAQAGQEPGPGKRACC 209
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRSK 147
LVGNK D D K+ V Q A++ G++ FETSAK N+NVEE+F +I + L
Sbjct: 125 LVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADT 184
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E Q + + + T++ K CC
Sbjct: 185 DARAEPQTIKINQSDQGAGTSQATQKSACC 214
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + Q
Sbjct: 118 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 178 AMNNARPPTVQIRGQPVNQ--KSGCC 201
>gi|432869273|ref|XP_004071705.1| PREDICTED: ras-related protein Rab-26-like [Oryzias latipes]
Length = 199
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKK 148
L L+GNK D +VV ED +R A + G+ ETSA+ +NVE F A+ L RS K
Sbjct: 116 LMLLGNKADSAHDRVVKREDGERLAKEFGVPFMETSARSGLNVELAFTAVAKELKHRSTK 175
Query: 149 EQKER 153
+ E+
Sbjct: 176 DPSEK 180
>gi|189069283|dbj|BAG36315.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|414872509|tpg|DAA51066.1| TPA: hypothetical protein ZEAMMB73_878736 [Zea mays]
Length = 1132
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + +Q
Sbjct: 868 LVGNKADMDESKQAVPTSKGQALADEYGIKFFETSAKKNLNVEQVFFSIARDI-----KQ 922
Query: 151 KERQVLNSDTVNIRKHTT 168
+ + + V ++ HT+
Sbjct: 923 RLSETDSKPEVQLKDHTS 940
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTT 52
GI+ FETSAK N+NVE++F +I + +Q+ + + V ++ HT+
Sbjct: 895 GIKFFETSAKKNLNVEQVFFSIARDI-----KQRLSETDSKPEVQLKDHTS 940
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + E
Sbjct: 125 LVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAES 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + ++N + +K C
Sbjct: 185 DSKPEDRTISINRPEGGEASASQKSAC 211
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|306014463|gb|ADM76285.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014489|gb|ADM76298.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014507|gb|ADM76307.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014519|gb|ADM76313.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014533|gb|ADM76320.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+VV + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 40 LVGNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQL 99
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++TV ++ + G CC
Sbjct: 100 TEGNRKANTVEMKGQPLQQKG--SCC 123
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D DP K+ V Q A++ GI+ FETSAK N+NVE++F I
Sbjct: 123 LVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIA 172
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F A+ V
Sbjct: 125 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMARDV 176
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|397776464|gb|AFO64930.1| Rab3 [Ruditapes philippinarum]
Length = 219
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV TE ++ A+Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 131 LVGNKCDLEDERVVSTERGKQLADQLGLEFFETSAKENINVKAVFERLVDII 182
>gi|440910159|gb|ELR59985.1| Ras-related protein Rab-3D, partial [Bos grunniens mutus]
Length = 222
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TE+ +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 135 LVGNKCDLEDERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 194
Query: 152 E 152
E
Sbjct: 195 E 195
>gi|354478791|ref|XP_003501598.1| PREDICTED: ras-related protein Rab-26-like, partial [Cricetulus
griseus]
Length = 234
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 150 LMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 202
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K R + + R H K G CC
Sbjct: 203 LKHRSIKAPSQPHFRLHDYVKKEGQGVSCC 232
>gi|145049708|gb|ABP35527.1| ARF small GTPase [Ipomoea batatas]
Length = 196
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 105 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA 154
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 155 LVGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 214
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP G +K+CC
Sbjct: 215 IRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 248
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +KVV TE+ Q+ A + G+ FE SAK++INVE+ F+ I V
Sbjct: 120 LVGNKCDMLDEKVVSTEEGQKLAKEFGVDFFECSAKNDINVEQSFLGIARSV 171
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ +E+ Q +G + FETSAKDNINV++ F + +++ E
Sbjct: 131 LVGNKCDMEDERVISSEEGQHLGEHLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 190
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R T P C
Sbjct: 191 ETDPPITAAKQNTRLKETPPPPHPNC 216
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV E A+ FA+++GI ETSAK+ NVE+ FM +
Sbjct: 118 LVGNKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMA 166
>gi|27696356|gb|AAH43857.1| Rab3d protein, partial [Xenopus laevis]
Length = 246
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ ED ++ A ++G + FE SAKDNINV+++F + +++ E
Sbjct: 161 LVGNKCDLEDDRVIAAEDGRKLAEELGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 220
Query: 152 E 152
E
Sbjct: 221 E 221
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L LVGNK D +K+VV TE Q A++ GI E S+K NINVEE F ++ + + +
Sbjct: 119 LILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAK 178
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K + S +NI + + KCC
Sbjct: 179 TKGNES-GSGGINIAEG--EENSASKCC 203
>gi|354475103|ref|XP_003499769.1| PREDICTED: ras-related protein Rab-3D-like [Cricetulus griseus]
gi|344240071|gb|EGV96174.1| Ras-related protein Rab-3D [Cricetulus griseus]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++V ED QR A+ +G + FE SAK+NINV+++F + + + E
Sbjct: 132 LVGNKCDLEDERLVPAEDGQRLADDLGFEFFEASAKENINVKQVFERLVDTICEKMTESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|306014457|gb|ADM76282.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014459|gb|ADM76283.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014461|gb|ADM76284.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014465|gb|ADM76286.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014467|gb|ADM76287.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014471|gb|ADM76289.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014473|gb|ADM76290.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014475|gb|ADM76291.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014477|gb|ADM76292.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014479|gb|ADM76293.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014481|gb|ADM76294.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014483|gb|ADM76295.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014485|gb|ADM76296.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014487|gb|ADM76297.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014491|gb|ADM76299.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014493|gb|ADM76300.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014495|gb|ADM76301.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014497|gb|ADM76302.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014499|gb|ADM76303.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014501|gb|ADM76304.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014503|gb|ADM76305.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014505|gb|ADM76306.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014509|gb|ADM76308.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014511|gb|ADM76309.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014513|gb|ADM76310.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014515|gb|ADM76311.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014517|gb|ADM76312.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014521|gb|ADM76314.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014523|gb|ADM76315.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014525|gb|ADM76316.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014527|gb|ADM76317.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014529|gb|ADM76318.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014531|gb|ADM76319.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014535|gb|ADM76321.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014537|gb|ADM76322.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014539|gb|ADM76323.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014541|gb|ADM76324.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014543|gb|ADM76325.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014545|gb|ADM76326.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014547|gb|ADM76327.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014549|gb|ADM76328.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+VV + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 40 LVGNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQL 99
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++TV ++ + G CC
Sbjct: 100 TEGNRKTNTVEMKGQPLQQKG--SCC 123
>gi|300798495|ref|NP_001178304.1| ras-related protein Rab-3D [Bos taurus]
gi|426229005|ref|XP_004008584.1| PREDICTED: ras-related protein Rab-3D [Ovis aries]
gi|296485855|tpg|DAA27970.1| TPA: RAB3D, member RAS oncogene family-like [Bos taurus]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV TE+ +R A+ +G + FE SAK+NINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+VV + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 118 LVGNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQL 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++TV ++ + G CC
Sbjct: 178 TEGNRKTNTVEMKGQPLQQKG--SCC 201
>gi|417397934|gb|JAA46000.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 256
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F+AI KE
Sbjct: 172 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKMGLNVDLAFIAIA-------KE 224
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + ++ + H + G CC
Sbjct: 225 LKQRSMKAPSELHFQLHDYVRREGRSASCC 254
>gi|397466907|ref|XP_003805180.1| PREDICTED: LOW QUALITY PROTEIN: putative Ras-related protein
Rab-1C-like [Pan paniscus]
Length = 223
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK+
Sbjct: 140 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKQMG 196
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 197 PGAASGGERPNLKIDSTPVKPAG-GGCC 223
>gi|395533067|ref|XP_003768585.1| PREDICTED: ras-related protein Rab-37 [Sarcophilus harrisii]
Length = 224
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +++VV +ED + A + G+ ETSAK +NVE F+AI R K +
Sbjct: 140 LLGNKADVSRERVVRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA----RELKHRA 195
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q N + I + + CC
Sbjct: 196 GQQPGNEPSFQIHDYVESQKKQPSCC 221
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q+ A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 120 LIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + VN+ + + G KCC
Sbjct: 180 KNEQPAASGVNVGE---QGGAGGKCC 202
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-----NLVLRS 146
L+GNK D +K+VV TE Q A+++GI E SAK NIN+++ F ++ L+ S
Sbjct: 120 LIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNS 179
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K +Q +N VN + + G KCC
Sbjct: 180 KNDQPAASGVN---VNDKSES----GGSKCC 203
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA 174
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + +
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADT 184
Query: 151 KERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+ T+ I + GG K CC
Sbjct: 185 DSKA--EPSTLKINQPEAGAGGSQTSQKSACC 214
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV TE Q A+++GI E SAK NIN+++ F ++ + + +
Sbjct: 120 LIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDSS 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ VN+ T G KCC
Sbjct: 180 KNDQATGTGVNVGDKT--DAGGSKCC 203
>gi|223634478|gb|ACN09816.1| GH27649p [Drosophila melanogaster]
Length = 263
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL---- 144
L +VGNK D +++ V ++A ++A +G Q ETSAK+N V E+F +T L+L
Sbjct: 162 ALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLS 221
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTK-------PGGKKKCC 177
+ + + ++ N DT N+ P G++ CC
Sbjct: 222 QRQPDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 261
>gi|147899840|ref|NP_001087991.1| RAB3D, member RAS oncogene family [Xenopus laevis]
gi|52139114|gb|AAH82662.1| LOC494677 protein [Xenopus laevis]
Length = 217
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ ED ++ A ++G + FE SAKDNINV+++F + +++ E
Sbjct: 132 LVGNKCDLEDDRVIPAEDGRKLAEELGFEFFEASAKDNINVKQVFERLVDIICEKMNESL 191
Query: 152 ER-QVLNSDTVNIRKHTTKPGGKKKC 176
E V S T + + + K C
Sbjct: 192 ENGPVPRSGTAQLTESSPKENSNCSC 217
>gi|260821258|ref|XP_002605950.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
gi|229291287|gb|EEN61960.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
Length = 218
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ TE ++ A+Q+G++ FETSAK+NINV++ F + +++
Sbjct: 131 LVGNKCDLEDERVISTERGKQLADQLGLEFFETSAKENINVKQTFERLVDII 182
>gi|357445239|ref|XP_003592897.1| Ras-like protein [Medicago truncatula]
gi|355481945|gb|AES63148.1| Ras-like protein [Medicago truncatula]
Length = 163
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D K+V T A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 79 LVGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMA 127
>gi|374256039|gb|AEZ00881.1| putative small GTP-binding protein, partial [Elaeis guineensis]
Length = 111
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N +VE++F +I + + E
Sbjct: 20 LVGNKADMDESKRAVSTSQGQMLADEYGIKFFETSAKTNFHVEQVFFSIAREIKQRLAES 79
Query: 151 KERQVLNSDTVNIRKHTTKPGG---KKKCC 177
+ + ++ T+ P K CC
Sbjct: 80 DSKAEPQTIKISKPDATSAPSAAEQKSSCC 109
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR----- 145
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + +
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAET 184
Query: 146 -SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
SK E K ++ D + + P ++ C
Sbjct: 185 DSKPEDKAIKINKPD-----QGSEAPAAQRSAC 212
>gi|301765878|ref|XP_002918360.1| PREDICTED: ras-related protein Rab-3C-like [Ailuropoda melanoleuca]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGRHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R + P + C
Sbjct: 192 ETDPAITAAKQNTRLKESPPPPQPNC 217
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D K+V T A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 119 LVGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTM 166
>gi|66803370|ref|XP_635528.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|60463853|gb|EAL62025.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 160
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+V T A+ +A+ +GI E SA +NVEE FMA+ N + R+
Sbjct: 79 LVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGS 138
Query: 152 ERQVLN 157
+ V+N
Sbjct: 139 KPSVVN 144
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP G +K+CC
Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|296219343|ref|XP_002755819.1| PREDICTED: ras-related protein Rab-26 [Callithrix jacchus]
Length = 256
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI L RS K
Sbjct: 172 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMK 231
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + D VN + G + CC
Sbjct: 232 APSEPRFRLHDYVN------RKGRRASCC 254
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ + N+ T+ + +PG G+K+ C
Sbjct: 182 QNSIRTNAITLGSAQAGQEPGPGEKRAC 209
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+ NVE+ F+ + + KK+
Sbjct: 118 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI---KKKMG 174
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + N++ K CC
Sbjct: 175 SQPTSSKSSGNVQMKGQPIQQKSSCC 200
>gi|449280987|gb|EMC88191.1| Ras-related protein Rab-10 [Columba livia]
Length = 164
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++VV + ++ A + GI FETSA+DN+N+E+ F +T +L E+K
Sbjct: 86 LLGNKCDKESERVVPKQKGEKLAWEHGIPFFETSARDNVNIEDAFTILTKEIL----EKK 141
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + D V +R+ K+ CC
Sbjct: 142 TCVLYDLDVVTLRE-----SKKRTCC 162
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 10/60 (16%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
GI FETSA+DN+N+E+ F +T +L E+K + + D V +R+ KK+ C
Sbjct: 112 GIPFFETSARDNVNIEDAFTILTKEIL----EKKTCVLYDLDVVTLRE------SKKRTC 161
>gi|432844372|ref|XP_004065737.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 82 YCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
Y W + + LVGNK D + + V +D QR A ++G Q FE SAKDNINV+++F + +
Sbjct: 125 YSWD-SAQVVLVGNKLDLEEDRQVPRQDGQRVATELGFQFFEASAKDNINVKQVFDRLVD 183
Query: 142 LVLRSKKEQKERQVLNSDT 160
++ +K Q N D
Sbjct: 184 VIC-----EKMNQSFNGDA 197
>gi|325297096|ref|NP_001191556.1| Rab3 [Aplysia californica]
gi|392973|gb|AAA03315.1| Rab3 [Aplysia californica]
Length = 219
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV TE ++ A+Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 131 LVGNKCDLEDERVVSTERGKQLADQLGLEFFETSAKENINVKAVFERLVDII 182
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N NVE++F +I
Sbjct: 146 LVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIA 195
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 144 LVGNKSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 203
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP G +K CC
Sbjct: 204 IRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKPCC 237
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN-----LVLRS 146
L+GNK D +K+VV TE Q A+++GI E SAK NIN+E+ F ++ + L+ S
Sbjct: 120 LIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDSS 179
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K+ ++ VN+ ++ G KCC
Sbjct: 180 KETGAATGNQSAGGVNVAQN-QGAGVGGKCC 209
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KKVV E A+ FA+ + I + ETSA D+ NVEE F+ + + + Q+
Sbjct: 118 LVGNKNDLKDKKVVDFEVAKEFADSLSIPVLETSALDSSNVEEAFLTMARQIKETMSHQQ 177
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
+ D + K + G CC
Sbjct: 178 KDTGKKDDKSGVNLKGQSLTGSSSGCC 204
>gi|322800183|gb|EFZ21268.1| hypothetical protein SINV_07541 [Solenopsis invicta]
Length = 220
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++V+ TE ++ A Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 127 LVGNKCDMEEERVISTERGKQLAEQLGVRFFETSAKENINVKAVFETLVDII 178
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K+ V +DAQ +A+ + ETSAK ++NV E+FMAI + +S+ +
Sbjct: 129 IALSGNKADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQ 188
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
S V++ + T P K CC
Sbjct: 189 AAGANSGRSRGVDLTE--TAPPTKAPCC 214
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
L+GNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 126 LIGNKADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSI 174
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+VV TE Q A+++GI E SAK NIN+++ F ++ + + +
Sbjct: 120 LIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNS 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ ++ VN+ + G KCC
Sbjct: 180 KNDQPSASGVNVGDKS--EAGGSKCC 203
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP G +K+CC
Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMSSEGMRKQCC 214
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ + A+++GI ETSAKD+INVE+ F+ + + + Q
Sbjct: 118 LVGNKCDLVENKVVDTQTGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV I+ + K CC
Sbjct: 178 AGAKKTGSTVQIKGQPIEQ--KSNCC 201
>gi|67481421|ref|XP_656060.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537443|dbj|BAB40676.1| small GTPase RabF5 [Entamoeba histolytica]
gi|56473237|gb|EAL50676.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407034121|gb|EKE37072.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702003|gb|EMD42718.1| small GTPase RabF5, putative [Entamoeba histolytica KU27]
Length = 196
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L +VGNK+D + V T++ + FA++ +E SA + NV E+F IT + S+ +
Sbjct: 109 LCIVGNKSDLEASRQVSTDEGKEFASKKNAMFYEVSAMNGKNVTELFTEITRKIKSSQPQ 168
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + +SD +N+ +T+P KK C
Sbjct: 169 KPQGGLSSSDNINVATVSTQPTKKKGFC 196
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 5 LFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
+E SA + NV E+F IT + S+ ++ + + +SD +N+ +T+P KK C
Sbjct: 140 FYEVSAMNGKNVTELFTEITRKIKSSQPQKPQGGLSSSDNINVATVSTQPTKKKGFC 196
>gi|99032489|pdb|2GF9|A Chain A, Crystal Structure Of Human Rab3d In Complex With Gdp
Length = 189
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV ED +R A+ +G + FE SAK+NINV+++F + +++
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVI 183
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP G +K+CC
Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|332849007|ref|XP_003315766.1| PREDICTED: ras-related protein Rab-37 [Pan troglodytes]
Length = 228
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 145 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 197
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 198 YRAGHQADEPSFQIRDYVESQKKRSSCC 225
>gi|296203112|ref|XP_002748751.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Callithrix
jacchus]
Length = 223
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R ++D + IR + + CC
Sbjct: 193 YRAGQSADEPSFQIRDYVESQKKRSSCC 220
>gi|281342126|gb|EFB17710.1| hypothetical protein PANDA_016232 [Ailuropoda melanoleuca]
Length = 192
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 108 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 160
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 161 LKQRSMKAPSEPRFRLHDYVKREGRGASCC 190
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K+ V E A+ FA+++GI ETSAK+ NVE+ FM + + K
Sbjct: 118 LVGNKSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KTRMA 174
Query: 152 ERQVLNSDT--VNIRKHTTKPGGK--KKCC 177
+ LN +R +P GK +CC
Sbjct: 175 SQPALNQGPKGATVRPGEGRPVGKANSQCC 204
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV +E A+ FA+++GI ETSAK+ NVE+ FMA+ ++++ +
Sbjct: 118 LVGNKSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMA-AEIKNRMASQ 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR K CC
Sbjct: 177 PSNNARPPTVQIRGQPVNQ--KSGCC 200
>gi|332849005|ref|XP_003315767.1| PREDICTED: ras-related protein Rab-37 [Pan troglodytes]
Length = 196
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 113 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 165
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 166 YRAGHQADEPSFQIRDYVESQKKRSSCC 193
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D KKVV T A +ANQ+GI ETSAK+ NVE+ FM +
Sbjct: 123 LVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTM 170
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKK- 148
LVGNK D + V T+DAQ FA G+ ETSA + NVEE F I + R SKK
Sbjct: 123 LVGNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKP 182
Query: 149 -------EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ V T+N+ KK+CC
Sbjct: 183 VASDESGQGAAGGVKEGKTINVATGGDAAAEKKQCC 218
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D+ KKVV A+ +A+Q+ I ETSAK+ NVE+ FM + + +
Sbjct: 118 LVGNKCDEVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPS 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
V S V I + T K CC
Sbjct: 178 SAAVTESAKVKIDQGRTIETNKSGCC 203
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KK V T+ A+ FA+ + I L ETSAKD NVE+ F+ + +
Sbjct: 118 LVGNKSDLVDKKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQIKDRMGSSM 177
Query: 152 ERQVLNSDTVNI-RKHTTKPGGKKKCC 177
++Q N TV + + +P CC
Sbjct: 178 QQQQQNKSTVRVGQGAAVQPQQSGGCC 204
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSI 173
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D +P K+ + T DA+ +A + G+ FETSAK + NV E+F AI +
Sbjct: 126 IALAGNKLDLVTENPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPL 185
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ + + V++R T+ G C
Sbjct: 186 DQAGPRNLRTTPRPGVDLRPETSGTQGAGAC 216
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV E A+ FA+++GI ETS K+ +NV + FMA++ + Q
Sbjct: 118 LVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV IR + G CC
Sbjct: 178 AANNARPATVQIRGQPVEQKG--SCC 201
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 126 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 185
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ + N+ T+ + +PG G+K+ C
Sbjct: 186 QNSIRTNAITLGSAQAGQEPGPGEKRAC 213
>gi|296232933|ref|XP_002761799.1| PREDICTED: ras-related protein Rab-3D [Callithrix jacchus]
gi|403302366|ref|XP_003941831.1| PREDICTED: ras-related protein Rab-3D [Saimiri boliviensis
boliviensis]
Length = 219
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV ED +R A+ +G + FE SAK+N+NV+++F + +++ E
Sbjct: 132 LVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENVNVKQVFERLVDVICEKMNESL 191
Query: 152 E 152
E
Sbjct: 192 E 192
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 92 LVGNKND-DPQKKV-----VLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV-- 143
LVGNK D D K+V V T Q A++ GI+ FETSAK N+NVEE+F +I +
Sbjct: 125 LVGNKADMDESKRVRTFSSVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQ 184
Query: 144 -LRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
L + E Q + + + ++ K CC
Sbjct: 185 RLSDSDSKSEPQTIKINQADNGAGASQTAQKSACC 219
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>gi|363730757|ref|XP_419183.3| PREDICTED: ras-related protein Rab-10 [Gallus gallus]
Length = 94
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++VV ++ A + GI FETSAKDN+N+E+ F +T +L E+K
Sbjct: 16 LLGNKCDKESERVVPKHKGEKLAWEHGIPFFETSAKDNVNIEDAFSVLTKEIL----EKK 71
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + D V++ + K+ CC
Sbjct: 72 SWVLYDLDVVDLNE-----SKKRTCC 92
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSK 31
GI FETSAKDN+N+E+ F +T +L K
Sbjct: 42 GIPFFETSAKDNVNIEDAFSVLTKEILEKK 71
>gi|301782311|ref|XP_002926579.1| PREDICTED: ras-related protein Rab-26-like, partial [Ailuropoda
melanoleuca]
Length = 232
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 148 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 200
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 201 LKQRSMKAPSEPRFRLHDYVKREGRGASCC 230
>gi|403280619|ref|XP_003931813.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 223
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R ++D + IR + + CC
Sbjct: 193 YRAGQSADEPSFQIRDYVESQKKRSSCC 220
>gi|194897947|ref|XP_001978753.1| GG17497 [Drosophila erecta]
gi|190650402|gb|EDV47680.1| GG17497 [Drosophila erecta]
Length = 222
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L +VGNK D +++ V ++A ++A +G Q ETSAK+N V E+F +T+L+L
Sbjct: 121 ALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTHLMLEQLS 180
Query: 149 EQKER------QVLNSDTVNIRKHTTKP-----GGKKKCC 177
+++ Q ++DT+N + + P G++ CC
Sbjct: 181 QRQPDASPLRLQNPDTDTLNNSEDSGAPDPGDLAGQRSCC 220
>gi|414588873|tpg|DAA39444.1| TPA: hypothetical protein ZEAMMB73_754957 [Zea mays]
gi|414588874|tpg|DAA39445.1| TPA: hypothetical protein ZEAMMB73_754957 [Zea mays]
Length = 126
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + E
Sbjct: 37 LVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAES 96
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + ++N + +K C
Sbjct: 97 DSKPEDRTISINRPEGGEASASQKSAC 123
>gi|62858521|ref|NP_001016372.1| RAB15, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267008|emb|CAJ81786.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213624493|gb|AAI71178.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213625715|gb|AAI71180.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
Length = 212
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 87 PSGLR--LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
P G++ L+GNK D+ QK+ V + A + G+ FETSA N N++E F +T LVL
Sbjct: 111 PDGVQKILIGNKADEEQKRQVGKNQGMKLAEEYGMDFFETSACTNYNIKESFTRLTELVL 170
Query: 145 RSKKEQKERQVLNS-DTVNI 163
+ K + E ++S D +N+
Sbjct: 171 MAHKRELEGLRMSSADELNL 190
>gi|407039029|gb|EKE39422.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
G LVGNK D Q + V TE Q A+++GI ETSA N++E F + V+ ++K
Sbjct: 120 GRILVGNKTDLEQHRTVSTEMGQSLADKIGIPFIETSAAKGENIQETFTCLIKEVIENQK 179
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q + +++ VN+ K TT ++ C
Sbjct: 180 QQTSTK--SAERVNVTKPTTPSTQEQAGC 206
>gi|414867230|tpg|DAA45787.1| TPA: hypothetical protein ZEAMMB73_964234 [Zea mays]
Length = 320
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 231 LVGNKVDMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA 280
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++V+ TE ++ A Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 167 LVGNKCDMEEERVISTERGKQLAEQLGVRFFETSAKENINVKAVFEQLVDII 218
>gi|255683305|ref|NP_001157461.1| ras-related protein Rab-37 isoform 4 [Homo sapiens]
gi|221044570|dbj|BAH13962.1| unnamed protein product [Homo sapiens]
gi|261860674|dbj|BAI46859.1| RAB37, member RAS oncogene family [synthetic construct]
Length = 228
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 145 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 197
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 198 YRAGHQADEPSFQIRDYVESQKKRSSCC 225
>gi|193806493|sp|Q92928.2|RAB1C_HUMAN RecName: Full=Putative Ras-related protein Rab-1C; Short=hRab1c
gi|119578676|gb|EAW58272.1| hCG2011109 [Homo sapiens]
Length = 201
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK+
Sbjct: 118 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKQMG 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + E
Sbjct: 125 LIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAET 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +N + P C
Sbjct: 185 DSKPEDKTIKINKAEGGDAPAASGSAC 211
>gi|312371535|gb|EFR19696.1| hypothetical protein AND_21957 [Anopheles darlingi]
Length = 683
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ E ++ A+Q+G++ FETSAK+N+NV+ +F + +++ K
Sbjct: 88 LVGNKCDMESERVISFERGKQLADQLGVEFFETSAKENVNVKNVFERLVDIIC-----DK 142
Query: 152 ERQVLNSDTVNI------RKHTTKPG 171
+ L+SD + ++ T +PG
Sbjct: 143 MSESLDSDPTLVAGGPKGQRLTDQPG 168
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D +P K+ + T DA+ +A + G+ FETSAK N NV+E+F AI
Sbjct: 126 IALAGNKLDLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIA 180
>gi|449283056|gb|EMC89759.1| Ras-related protein Rab-37, partial [Columba livia]
Length = 213
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L+GNK D ++ V TED A + G+ ETSAK +NVE F+A+ KE
Sbjct: 128 IMLLGNKADVSSERAVRTEDGASLAREYGVPFMETSAKTGMNVELAFLAVA-------KE 180
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKK--CC 177
K+R V D + H KKK CC
Sbjct: 181 LKQRAVQPLDEPRFQIHDYIESQKKKSSCC 210
>gi|427781093|gb|JAA55998.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 255
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D Q + V TED +R A + G+ ETSAK NVE FMA V R K++
Sbjct: 169 LIGNKADITQDRQVRTEDGERLAREYGVAFMETSAKTGCNVELAFMA----VARELKQRA 224
Query: 152 ERQVLNSD-----TVNIRKHT-TKPGGKKKCC 177
R + T IR+ + +P G CC
Sbjct: 225 SRSAHGASGRFNMTEYIRQESQARPNG---CC 253
>gi|118388061|ref|XP_001027131.1| Ras family protein [Tetrahymena thermophila]
gi|89308901|gb|EAS06889.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 270
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
L+GNK D ++ V TE+ Q AN+ G FETSA+D+INV+E F + + R
Sbjct: 144 LIGNKKDKESQRQVQTEEGQAVANENGFLFFETSARDSINVDEAFTKLAEQITR 197
>gi|431922009|gb|ELK19182.1| cAMP-specific 3',5'-cyclic phosphodiesterase 4C [Pteropus alecto]
Length = 900
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNK D ++VV +E ++ A+ +G + FE SAKDNINV++ F + +++ E
Sbjct: 812 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE 869
>gi|306014455|gb|ADM76281.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014469|gb|ADM76288.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 124
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+VV + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 40 LVGNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQL 99
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++TV ++ + G CC
Sbjct: 100 TEGNRKTNTVEMKGQPLQQKG--SCC 123
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV A+ FA+Q+GI ETSAKD+ NVE+ F+ + + +++ Q
Sbjct: 118 LVGNKCDLTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEI-KARMAQA 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++ + G KK CC
Sbjct: 177 PAPKSGGQSIQVGAGAA-VGEKKGCC 201
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + GI+ ETSAK NIN+E F + +L R
Sbjct: 119 ILGNKCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTAGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ER V++ R++ K K CC
Sbjct: 179 SAENPERVVVD------RRNNEKAPAYKSCC 203
>gi|194704152|gb|ACF86160.1| unknown [Zea mays]
gi|224034869|gb|ACN36510.1| unknown [Zea mays]
gi|414591887|tpg|DAA42458.1| TPA: hypothetical protein ZEAMMB73_159434 [Zea mays]
gi|414591888|tpg|DAA42459.1| TPA: hypothetical protein ZEAMMB73_159434 [Zea mays]
Length = 160
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F A+
Sbjct: 67 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMA 115
>gi|187471093|sp|Q54FL2.2|RABG2_DICDI RecName: Full=Ras-related protein RabG2
Length = 197
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+V T A+ +A+ +GI E SA +NVEE FMA+ N + R+
Sbjct: 116 LVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGS 175
Query: 152 ERQVLN 157
+ V+N
Sbjct: 176 KPSVVN 181
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIA 174
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 129 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 185
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 186 PGAATGGERPNLKIDSTPVKPAG-GGCC 212
>gi|348533147|ref|XP_003454067.1| PREDICTED: ras-related protein Rab-37-like [Oreochromis niloticus]
Length = 228
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-TNLVLRSKK 148
+ L+GNK+D ++VV TED ++ A + G+ ETSAK +NV+ F AI L R+ +
Sbjct: 144 IMLLGNKSDMAAERVVKTEDGEKLAKEYGVPFMETSAKTGVNVDLAFHAIGKELKHRATQ 203
Query: 149 EQKERQVLNSDTVNIRKHTT 168
+ E + D + +KH T
Sbjct: 204 QPNEPKFQIHDYIESQKHKT 223
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KVV E A+ FA+++GI ETSAK NVE+ FMA+ + K +
Sbjct: 118 LVGNKSDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q +N+ TV IR K CC
Sbjct: 174 ATQPMNNARPPTVQIRGQPVNQ--KSGCC 200
>gi|417407683|gb|JAA50442.1| Putative gtpase rab3 small g protein superfamily, partial [Desmodus
rotundus]
Length = 103
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VVL ED QR A + FE SAK+NINV+++F + +++ E
Sbjct: 16 LVGNKCDLEDERVVLAEDGQRLAXXXXFEFFEASAKENINVKQVFERLVDIICEKMNESL 75
Query: 152 E 152
E
Sbjct: 76 E 76
>gi|440792400|gb|ELR13622.1| Ras family protein rasG, putative, partial [Acanthamoeba
castellanii str. Neff]
Length = 132
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 56 GKKKVCTVLNECAWLGCGWMTICPIIY------CWLFPSGLR------------LVGNKN 97
G+ + ++ G G++ + II +F S ++ LVGNK
Sbjct: 1 GQDDFSAIRDQYYRTGDGFLCVYSIILRSSYDEVKIFHSAIKRVKDSGSRIPFVLVGNKT 60
Query: 98 DDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
D ++ V E+ + A Q+ Q E SAK INVEEMF+ + V++++KE
Sbjct: 61 DLEDERKVTKEEGEELAKQLNAQFMEASAKKKINVEEMFITLVREVMQARKE 112
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR---S 146
+ LVGNK+D + V TE+A+ FA + + ETSA D NVE F I + R S
Sbjct: 118 IMLVGNKSDLKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSS 177
Query: 147 KKEQKERQVL---NSDTVNIRKHTTKPGGKKKCC 177
K ++ + SDT+ + + P KCC
Sbjct: 178 KTLEQSSDPIKAPTSDTIPVAIDSAAPASGSKCC 211
>gi|427779031|gb|JAA54967.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 297
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D Q + V TED +R A + G+ ETSAK NVE FMA+ R K++
Sbjct: 211 LIGNKADITQDRQVRTEDGERLAREYGVAFMETSAKTGCNVELAFMAVA----RELKQRA 266
Query: 152 ERQVLNSD-----TVNIRKHT-TKPGGKKKCC 177
R + T IR+ + +P G CC
Sbjct: 267 SRSAHGASGRFNMTEYIRQESQARPNG---CC 295
>gi|426346639|ref|XP_004040979.1| PREDICTED: ras-related protein Rab-37 isoform 3 [Gorilla gorilla
gorilla]
gi|221041138|dbj|BAH12246.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 113 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 165
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 166 YRAGHQADEPSFQIRDYVESQKKRSSCC 193
>gi|13325196|gb|AAH04416.1| Unknown (protein for IMAGE:3641449), partial [Homo sapiens]
Length = 127
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 36 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 95
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ + N+ T+ + +PG G+K+ C
Sbjct: 96 QNSIRTNAITLGSAQAGQEPGPGEKRAC 123
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KVV + A+ FA+++GI ETSAKD+INVE+ F+ +
Sbjct: 118 LVGNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQAFLTM 165
>gi|19424194|ref|NP_598220.1| ras-related protein Rab-3C [Rattus norvegicus]
gi|1373214|gb|AAC52879.1| GTP-binding protein [Rattus norvegicus]
Length = 227
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV TE + Q+G + FETSAKDNINV++ F + +++
Sbjct: 140 LVGNKCDMEDERVVSTERGRHLGEQLGFEFFETSAKDNINVKQTFERLVDII 191
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV T+ A+ FA+++GI ETSAK+ NVE+ FM + + K
Sbjct: 118 LVGNKADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KNRMA 174
Query: 152 ERQVLNSDTV-NIRKHTTKPGGKKKCC 177
+ +NS+ N+ + +P +K C
Sbjct: 175 SQPAMNSNKPNNVSLNKGQPLNQKGGC 201
>gi|440792412|gb|ELR13634.1| RasG, putative [Acanthamoeba castellanii str. Neff]
Length = 193
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 55 GGKKKVCTVLNECAWLGCGWMTICPIIY------CWLFPSGLR------------LVGNK 96
G+ + ++ G G++ + II +F S ++ LVGNK
Sbjct: 61 AGQDDFSAIRDQYYRTGDGFLCVYSIILRSSYDEVKIFHSAIKRVKDSGSRIPFVLVGNK 120
Query: 97 NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
D ++ V E+ + A Q+ Q E SAK INVEEMF+ + V++++KE
Sbjct: 121 TDLEDERKVTKEEGEELAKQLNAQFMEASAKKKINVEEMFITLVREVMQARKE 173
>gi|414873638|tpg|DAA52195.1| TPA: hypothetical protein ZEAMMB73_474344 [Zea mays]
Length = 127
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I
Sbjct: 37 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA 86
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KVV + A+ FA+++GI ETSAKD+I+VE+ F+ +T
Sbjct: 118 LVGNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSISVEQAFLTMT 166
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
L+GNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F +I + + E
Sbjct: 125 LIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAET 184
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +N + P C
Sbjct: 185 DSKPEDKTIKINKTEGGDAPAASGSAC 211
>gi|67476106|ref|XP_653656.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56470631|gb|EAL48270.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790130|dbj|BAD82861.1| small GTPase EhRabX13 [Entamoeba histolytica]
gi|449708841|gb|EMD48222.1| small GTPase EhRabX13, putative [Entamoeba histolytica KU27]
Length = 207
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
G LVGNK D Q + V TE Q A+++GI ETSA N++E F + V+ ++K
Sbjct: 120 GRILVGNKTDLEQHRTVSTEMGQSLADKIGIPFIETSAAKGENIQETFTCLIKEVIENQK 179
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+Q + +++ VN+ K TT ++ C
Sbjct: 180 QQTSTK--STERVNVTKPTTPSTQEQAGC 206
>gi|414883913|tpg|DAA59927.1| TPA: hypothetical protein ZEAMMB73_741957 [Zea mays]
Length = 130
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVGNK D K+VV Q+ A++ GI+ FETSAK N NVE++F A+ V R
Sbjct: 37 LVGNKVDMDAKRVVSMAQGQKLADEYGIKFFETSAKTNQNVEQVFFAMARDVKR 90
>gi|241997950|ref|XP_002433618.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
gi|215495377|gb|EEC05018.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV TE ++ A+Q+G++ FETSAK+N+NV+ +F + +++
Sbjct: 131 LVGNKCDMEDERVVSTERGKQLADQLGLEFFETSAKENVNVKAVFERLVDII 182
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
L+GNK D + V TEDAQ +A + G+ ETSA + +NVE+ F I + + R SKK
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 150 QKERQ------VLNSDTVNIRKHTTKPGGKKKCC 177
Q V T+++ +++ KK CC
Sbjct: 182 ISSDQASANANVKEGQTIDV-AASSESNTKKPCC 214
>gi|396468450|ref|XP_003838176.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
gi|312214743|emb|CBX94697.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVL 144
+ L GNK D P K+ + T DA+++A + G+ FETSAK + NV E+F AI L +
Sbjct: 269 IALAGNKLDLVTESPDKRAITTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPI 328
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ R VN+R + G C
Sbjct: 329 DQSGPRNLRPGQQRQGVNLRPEANQTQGPGAC 360
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L LVGNKND+ + V +E + A ++GI E SAK N NV+E+F + ++ ++
Sbjct: 121 LILVGNKNDEKDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELFFKLAKII---QEN 177
Query: 150 QKERQVLNSDT--VNIRKHTTKPGGKKKCC 177
K + LNS+ +N+ T G CC
Sbjct: 178 NKSNENLNSNNGGINVNSRTESKG----CC 203
>gi|307777766|dbj|BAJ21279.1| Rab-family small GTPase Rab2C [Tetrahymena thermophila]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
L+GNK D ++ V TE+ Q AN+ G FETSA+D+INV+E F + + R
Sbjct: 117 LIGNKKDKESQRQVQTEEGQAVANENGFLFFETSARDSINVDEAFTKLAEQITR 170
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ + N+ T+ + +PG G+K+ C
Sbjct: 182 QNSIRTNAITLGSAQPGQEPGPGEKRAC 209
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 132 LVGNKCDMEDERVISTERGKHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R + P + C
Sbjct: 192 ETDPAIAAGKQNTRLKESPPPQQPNC 217
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 181 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 237
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 238 PGAASGGERPNLKIDSTPVKPAG-GGCC 264
>gi|346321156|gb|EGX90756.1| GTP-binding protein SAS1 [Cordyceps militaris CM01]
Length = 227
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+V+ E Q A+++GI E SAK NIN+++ F ++ + + +
Sbjct: 143 LIGNKCDWEDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNS 202
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +S VN+ T+ G KCC
Sbjct: 203 KNEAGSSGGVNVGDK-TEGGMGGKCC 227
>gi|432105575|gb|ELK31772.1| Ras-related protein Rab-3C [Myotis davidii]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV E Q Q+G + FETSAKDNINV++ F + +++
Sbjct: 132 LVGNKCDMEDERVVSVERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDVI 183
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE + Q+G + FETSAKDNINV++ F + +++ E
Sbjct: 140 LVGNKCDMEDERVISTERGKHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKC 176
E + + N R + P + C
Sbjct: 200 ETDPAIAAGKQNTRLKESPPPQQPNC 225
>gi|221500833|ref|NP_001036321.2| Rab21, isoform C [Drosophila melanogaster]
gi|442617211|ref|NP_001259785.1| Rab21, isoform D [Drosophila melanogaster]
gi|220901851|gb|EAA46055.3| Rab21, isoform C [Drosophila melanogaster]
gi|440217029|gb|AGB95623.1| Rab21, isoform D [Drosophila melanogaster]
Length = 222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL---- 144
L +VGNK D +++ V ++A ++A +G Q ETSAK+N V E+F +T L+L
Sbjct: 121 ALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLS 180
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTK-------PGGKKKCC 177
+ + + ++ N DT N+ P G++ CC
Sbjct: 181 QRQPDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 220
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KK V TE A FA + I L ETSAKD NVE+ F+ + + + +
Sbjct: 122 LVGNKSDLTDKKAVSTEQANEFAESIKISLLETSAKDATNVEQAFLTMAKQI-KDRMGTT 180
Query: 152 ERQVLNSDTVNIRKHTT-KPGGKKKCC 177
+Q TV + + + +P CC
Sbjct: 181 MQQTQTKSTVKVGQGASLEPKQSGGCC 207
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D + VLTE+A+ FA + G+ ETSA D+ NV+ F I + R +++
Sbjct: 121 LVGNKSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQ 180
Query: 152 ERQVLNSDTV---NIRKHTTKP-----GGKKKCC 177
R DT+ N+ KP +K+CC
Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMSSDSVRKQCC 214
>gi|114670336|ref|XP_001135551.1| PREDICTED: ras-related protein Rab-37 isoform 5 [Pan troglodytes]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 193 YRAGHQADEPSFQIRDYVESQKKRSSCC 220
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV---LRS 146
+ L GNK D ++VV E+AQ +ANQ G+ ETSAK NV E+F AI + +
Sbjct: 117 IALAGNKVDLEAQRVVSHEEAQEYANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEP 176
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ +Q+ +D+ P +++CC
Sbjct: 177 PRSSGAQQLTQNDS---------PAQQRQCC 198
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D ++VV E Q AN+ I+ FETSAK +INVEE F+ I
Sbjct: 122 LVGNKADMEDRRVVSKEQGQALANEFRIKFFETSAKADINVEEAFVCIA 170
>gi|296203114|ref|XP_002748752.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Callithrix
jacchus]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R ++D + IR + + CC
Sbjct: 186 YRAGQSADEPSFQIRDYVESQKKRSSCC 213
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV T A+ FA+ +GI ETSAK + NVE+ FM +
Sbjct: 118 LVGNKSDLVAKKVVDTNTAKSFADTLGIPFLETSAKQSTNVEQAFMTM 165
>gi|21429138|gb|AAM50288.1| RE42508p [Drosophila melanogaster]
gi|220948536|gb|ACL86811.1| Rab21-PA [synthetic construct]
gi|220957812|gb|ACL91449.1| Rab21-PA [synthetic construct]
Length = 222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL---- 144
L +VGNK D +++ V ++A ++A +G Q ETSAK+N V E+F +T L+L
Sbjct: 121 ALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLS 180
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTK-------PGGKKKCC 177
+ + + ++ N DT N+ P G++ CC
Sbjct: 181 QRQPDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 220
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 186 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 242
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 243 PGAASGGERPNLKIDSTPVKPAG-GGCC 269
>gi|357613110|gb|EHJ68321.1| ras-related GTP-binding protein Rab3 [Danaus plexippus]
Length = 155
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++VV +E ++ A+Q+G++ +ETSAK+NINV+ +F + +++
Sbjct: 66 LVGNKCDMEEERVVSSERGRQLADQLGVEFYETSAKENINVKAVFERLVDII 117
>gi|332022383|gb|EGI62695.1| Ras-related protein Rab-21 [Acromyrmex echinatior]
Length = 239
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L + GNK D + + V TE+A+ +A Q+G F TSAK N N+EEMF+ +T +++ E
Sbjct: 119 LVIAGNKVDLEKDRNVATEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQRADE 178
Query: 150 QKERQVL 156
+++ L
Sbjct: 179 AEQKSTL 185
>gi|226499762|ref|NP_001148897.1| LOC100282517 [Zea mays]
gi|195623018|gb|ACG33339.1| ras-related protein ARA-3 [Zea mays]
Length = 130
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F A+
Sbjct: 37 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVFFAMA 85
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-----TNLVLRS 146
L+GNK D +K+V+ TE Q+ A+++GI E SAK IN+++ F + T +V +
Sbjct: 120 LIGNKCDWEEKRVISTERGQQLADELGIPFLEVSAKSGINIDKAFYNLASDIKTRIVDTA 179
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K EQ S VN+ G KCC
Sbjct: 180 KTEQTA-----SAGVNVNSSGDSNGLGGKCC 205
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V Q FA++ GI+ FETSAK N+NVE++F I
Sbjct: 125 LVGNKADMDESKRAVPPSKGQAFADEYGIKFFETSAKTNLNVEQVFFFIA 174
>gi|440292001|gb|ELP85243.1| Ras family protein, partial [Entamoeba invadens IP1]
Length = 145
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 81 IYCWLFPSGLR--LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFM 137
+YC P G++ LVGNK D + Q + V + ++FA++ G FETSAK NI VE+ F
Sbjct: 49 MYC---PQGVKIVLVGNKVDLENQARAVTYAEGKKFADEGGYDFFETSAKLNIKVEDAFR 105
Query: 138 A-ITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+T +V E + D V I + T+ KK CC
Sbjct: 106 GLVTKIVQADHSHTTEVTQSSQDRVKITQQKTQE-EKKGCC 145
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+V+ E Q A+++GI E SAK NIN+++ F ++ + + +
Sbjct: 122 LIGNKCDWEDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNS 181
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +S VN+ T+ G KCC
Sbjct: 182 KNETGSSGGVNV-GDKTEGGMGSKCC 206
>gi|403280621|ref|XP_003931814.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R ++D + IR + + CC
Sbjct: 186 YRAGQSADEPSFQIRDYVESQKKRSSCC 213
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV-LRSKKEQ 150
LVGNK+D KKVV ++ + A+Q+GI ETSAK++ NVE+ F+ ++ + R K
Sbjct: 123 LVGNKSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTP 182
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +R G + CC
Sbjct: 183 QPSRSGAGGPARLRPGQPAHGNQSGCC 209
>gi|54859685|ref|NP_001006639.1| ras-related protein Rab-37 isoform 2 [Homo sapiens]
gi|20139581|sp|Q96AX2.3|RAB37_HUMAN RecName: Full=Ras-related protein Rab-37; Flags: Precursor
gi|16741621|gb|AAH16615.1| RAB37 protein [Homo sapiens]
gi|21758002|dbj|BAC05227.1| unnamed protein product [Homo sapiens]
gi|119609585|gb|EAW89179.1| RAB37, member RAS oncogene family, isoform CRA_c [Homo sapiens]
gi|119609587|gb|EAW89181.1| RAB37, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 193 YRAGHQADEPSFQIRDYVESQKKRSSCC 220
>gi|116007254|ref|NP_001036322.1| Rab21, isoform A [Drosophila melanogaster]
gi|30923579|gb|EAA46056.1| Rab21, isoform A [Drosophila melanogaster]
Length = 189
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL---- 144
L +VGNK D +++ V ++A ++A +G Q ETSAK+N V E+F +T L+L
Sbjct: 88 ALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLS 147
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTK-------PGGKKKCC 177
+ + + ++ N DT N+ P G++ CC
Sbjct: 148 QRQPDASPLRLQNPDTDNLNNSDDSEAPDPGDPAGQRSCC 187
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D Q + V E+A+ FA+ G+ ETSA D+ NVE+ F I + ++QK
Sbjct: 121 LVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQK 180
Query: 152 ERQVLNSDTVNIRKHTTKPGG-----KKKCC 177
+R S+ V++ + + K++CC
Sbjct: 181 QRNS-QSNAVSLANESPESAAAARMEKRQCC 210
>gi|312071697|ref|XP_003138728.1| rab family protein 3 [Loa loa]
gi|307766114|gb|EFO25348.1| Ras-like protein Rab-3 [Loa loa]
Length = 221
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV E ++ A+Q+G++ FETSAK+NINV+ +F + ++ +K
Sbjct: 133 LVGNKCDMDDERVVSCERGKQLADQLGLEFFETSAKENINVKAVFEKLVEIIC-----EK 187
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK 174
+ L+SD T P G++
Sbjct: 188 MAESLDSDPA-----ATHPKGQR 205
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIA 174
>gi|332849009|ref|XP_003315768.1| PREDICTED: ras-related protein Rab-37 [Pan troglodytes]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 103 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 155
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 156 YRAGHQADEPSFQIRDYVESQKKRSSCC 183
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N NVE++F++I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIA 174
>gi|195355659|ref|XP_002044308.1| GM10050 [Drosophila sechellia]
gi|194129619|gb|EDW51662.1| GM10050 [Drosophila sechellia]
Length = 224
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L +VGNK D Q++ V +DA ++A +G Q ETSAK+N V E+F +T L+L
Sbjct: 121 ALIIVGNKTDLEQQRAVTQDDALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLS 180
Query: 149 EQKER------QVLNSDTVNIRKHTTKPG-------GKKKCC 177
+++ Q DT+N + P G++ CC
Sbjct: 181 QRQPDASPLRLQNPEPDTLNNSDDSEAPDPGDPARTGQRSCC 222
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ FA +G+ ETSAK++INVE F+ +++
Sbjct: 119 LVGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSS 168
>gi|301762494|ref|XP_002916664.1| PREDICTED: ras-related protein Rab-1B-like isoform 2 [Ailuropoda
melanoleuca]
Length = 169
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 86 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 142
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 143 PGAASGGERPNLKIDSTPVKPAG-GGCC 169
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+ NVE+ F+ +
Sbjct: 118 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMA 166
>gi|426346635|ref|XP_004040977.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Gorilla gorilla
gorilla]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 193 YRAGHQADEPSFQIRDYVESQKKRSSCC 220
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V E A+ FA+ +GI ETSAKD NVE+ FMA+T S K++
Sbjct: 118 LVGNKCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMT----ASIKDRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G CC
Sbjct: 174 ASQPANNARPPTVQIRGQPVAQKG--GCC 200
>gi|6919949|sp|O93856.1|RAS_LACBI RecName: Full=Ras-like protein; Flags: Precursor
gi|4104252|gb|AAD01987.1| ras protein [Laccaria bicolor]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 86 FPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
FP + +VGNK D +++VV ++ + A Q G + ETSAK INVE F + + R
Sbjct: 114 FP--IIVVGNKCDLDKERVVSKQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIRR 171
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
KE + + + ++PG CC
Sbjct: 172 YNKEMSNPSGFGARAPDSKMDVSEPGESAGCC 203
>gi|297697814|ref|XP_002826037.1| PREDICTED: ras-related protein Rab-26 isoform 2 [Pongo abelii]
Length = 290
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 206 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 258
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G + CC
Sbjct: 259 LKQRSMKAPSEPRFRLHDYVKREGRRASCC 288
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+VV + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 118 LVGNKCDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQL 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++T+ ++ P CC
Sbjct: 178 TEGNRKANTIEMKGQPL-PQRGGSCC 202
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NVE++F I
Sbjct: 125 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIA 174
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV +A+ FA+++GI ETSAK+ NVE+ F+ ++
Sbjct: 119 LVGNKSDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMS 167
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V Q A++ GI+ FETSAK N+NVEE+F +I
Sbjct: 125 LVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 173
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D + KVV T+ A+ FA+++GI ETSAKD+ NVE+ F+ +
Sbjct: 122 LVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMA 170
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 92 LVGNKNDDPQ-KKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-RSKKE 149
LVGNK D + K+VV Q A++ G + +ETSAKDN++VEE F+A+ VL R + E
Sbjct: 123 LVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGE 182
Query: 150 QKERQVLN------SDTVNIRKHTTKPGGKKKCC 177
+Q+L + V + + P K CC
Sbjct: 183 HANQQLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVL 28
G + +ETSAKDN++VEE F+A+ VL
Sbjct: 149 FGFRFYETSAKDNVHVEEAFIAVAKDVL 176
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK D D K+ V Q AN+ GI+ FETSAK N+NV+E F +I R K++
Sbjct: 126 LVGNKVDMDESKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAFFSIA----RDIKQR 181
Query: 151 KERQVLNSDTVNIRKH---TTKPGGKK-KCC 177
+ I KH T G +K +CC
Sbjct: 182 LPDSKKTPSRIRINKHNNATAARGSQKSECC 212
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKH---TTKPGGK 57
GI+ FETSAK N+NV+E F +I R K++ + I KH T G +
Sbjct: 152 YGIKFFETSAKTNLNVDEAFFSIA----RDIKQRLPDSKKTPSRIRINKHNNATAARGSQ 207
Query: 58 KKVC 61
K C
Sbjct: 208 KSEC 211
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q A+++GI E SAK NINV++ F ++ + + + +
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLAGDIKKRIVDTQ 179
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
+ Q N V++ + GG K CC
Sbjct: 180 QPQQGNQQGVSVGGQQSAAGGLGKNCC 206
>gi|432873564|ref|XP_004072279.1| PREDICTED: ras-related protein Rab-3C-like [Oryzias latipes]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L GNK D +++VV E + A Q+G + FETSAKDNINV++ F + +L+
Sbjct: 131 LAGNKCDMEEERVVSVESGRLLAEQLGFEFFETSAKDNINVKQTFERLVDLI 182
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G + FETSAKDNINV++ F + +L+
Sbjct: 156 LGFEFFETSAKDNINVKQTFERLVDLI 182
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQ 150
LVGNK+D + V TE A+ FA+ +G+ ETSAK NVEE F+ + +++ ++ +
Sbjct: 125 LVGNKSDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMAGELIKQREAK 183
>gi|393909074|gb|EJD75305.1| hypothetical protein LOAG_17513 [Loa loa]
Length = 125
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D+ Q++ V +E Q+ A++ G ETSAKDN N+ E+F + +
Sbjct: 49 LVGNKKDEDQRREVSSELGQKLASKWGTDFIETSAKDNENITELFQRLLAM--------- 99
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
ER+ + T+N + + K G K+KC
Sbjct: 100 ERKRTLALTMN--EESGKSGSKRKCS 123
>gi|311266848|ref|XP_003131275.1| PREDICTED: ras-related protein Rab-37-like isoform 1 [Sus scrofa]
Length = 223
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ ++
Sbjct: 140 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQA 199
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+E D V +K +PG CC
Sbjct: 200 EEPSFQIRDYVESQKK--RPG----CC 220
>gi|167390752|ref|XP_001739484.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896757|gb|EDR24084.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
G LVGNK D Q + V TE Q A+++GI ETSA N++E F + V+ ++K
Sbjct: 120 GRILVGNKTDLEQHRTVSTEMGQSLADKIGIPFIETSAAKGENIQETFTCLIKEVIENQK 179
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKK--CC 177
+Q + +++ VN+ K TT P +++ CC
Sbjct: 180 QQTSTK--SAERVNVTKPTT-PNTQEQAGCC 207
>gi|397484432|ref|XP_003813381.1| PREDICTED: ras-related protein Rab-37 isoform 3 [Pan paniscus]
Length = 228
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 145 LLGNKADMSGERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 197
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 198 YRAGHQADEPSFQIRDYVESQKKRSSCC 225
>gi|390459930|ref|XP_002806670.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-3C-like
[Callithrix jacchus]
Length = 225
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++V+ TE Q Q+G + FETSAKDNINV++ + +++ E
Sbjct: 138 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTXERLVDIICDKMSEGL 197
Query: 152 ERQ-VLNSDTVNIRKHTTKPGGKKKCC 177
E + + N R T P + C
Sbjct: 198 ETDPAITAAKQNTRLKETPPPPQPNCA 224
>gi|198471676|ref|XP_002133801.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
gi|198146025|gb|EDY72428.1| GA22589 [Drosophila pseudoobscura pseudoobscura]
Length = 224
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L +VGNK D +++ + EDA+++A +G Q E SAK+N V E+F +T L+L +
Sbjct: 122 LIIVGNKTDLEEQRAIGYEDARQYAQTVGAQYLEASAKENEGVAEIFELLTQLML-ERLS 180
Query: 150 QKER--------QVLNSDTVNIRK-----HTTKPG-GKKKCC 177
Q+ER ++ SD V++ + T G G++ CC
Sbjct: 181 QRERDAEPPNLLRLDASDAVSVSEGEEGNDTDDTGTGQRSCC 222
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++V+ +E ++ A Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 166 LVGNKCDMEEERVISSERGKQLAEQLGVRFFETSAKENINVKAVFETLVDII 217
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K+ V ++AQ +A+ + ETSAK ++NV E+FMAI + +S+ +
Sbjct: 128 IALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQ 187
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
V++ + T P K +CC
Sbjct: 188 SAGANSARGRGVDLTEPTQPP--KSQCC 213
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV T+ + A+++GI ETSAKD+INVE+ F+ + + + Q
Sbjct: 118 LVGNKCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV I+ + G CC
Sbjct: 178 AGAKRTGSTVQIKGQPIEQKG--NCC 201
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
L+GNK D K+ V T+ Q A+++G++ ETSAK NINVEE F ++
Sbjct: 119 LIGNKCDWDDKRAVSTQQGQELADELGVRFLETSAKQNINVEEAFFSLA 167
>gi|383854082|ref|XP_003702551.1| PREDICTED: ras-related protein Rab-3-like [Megachile rotundata]
Length = 264
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++V+ E ++ A+Q+G+Q FETSAK+NIN++ +F + +++
Sbjct: 172 LVGNKCDMDEERVISFERGKQLADQLGVQFFETSAKENINIKTVFEQLVDII 223
>gi|184186083|ref|NP_001116967.1| rab3 GTPase [Strongylocentrotus purpuratus]
gi|60653473|gb|AAB67800.2| GTP-binding protein [Strongylocentrotus purpuratus]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++V+ T+ ++ A+Q+G++ FETSAK+NINV++ F + +++
Sbjct: 132 LVGNKCDMEDERVISTDKGKQLADQLGLEFFETSAKENINVKQTFERLVDII 183
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV + A+ FA+++GI ETSAK+ NVE+ FM + + Q
Sbjct: 118 LVGNKCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
T+ +R + K CC
Sbjct: 178 SMSAAKPTTIPLRGQVLQ--HKPNCC 201
>gi|186969250|gb|ACC97494.1| R-ras1 [Kryptolebias marmoratus]
Length = 197
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 86 FPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
FP + LVGN+ D Q++V+ EDAQ FA+ I E SAK+ NV+E FM + ++ R
Sbjct: 113 FP--MVLVGNQADLEQQRVISREDAQAFASDNRIHYMEASAKNRYNVDEAFMELVQIIRR 170
Query: 146 SKK 148
K+
Sbjct: 171 FKE 173
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVGNK+D QKKVV A+ FA+Q+ I ETSAK+ NVE+ F+ + + R
Sbjct: 251 LVGNKSDLQQKKVVDYTVAKEFADQLAIPFLETSAKNATNVEQAFLVMAEHIKR 304
>gi|255683308|ref|NP_001157462.1| ras-related protein Rab-37 isoform 5 [Homo sapiens]
gi|221041190|dbj|BAH12272.1| unnamed protein product [Homo sapiens]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 103 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 155
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 156 YRAGHQADEPSFQIRDYVESQKKRSSCC 183
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND KKVV E A+ FA+ + I + ETSA D+ NVEE F+ + + + Q+
Sbjct: 118 LVGNKNDLKDKKVVDFEVAREFADSLNIPVLETSALDSSNVEEAFLTMARQIKETMSHQQ 177
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
+ D VN++ + G CC
Sbjct: 178 KESGKKDDKSGVNLKGQSLANSG-GGCC 204
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D D K+ V T Q A++ GI+ FETSAK N NVE++F++I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIA 174
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV +A+ FA+++GI ETSAK+ NVE+ F+ ++
Sbjct: 119 LVGNKSDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMS 167
>gi|311266850|ref|XP_003131276.1| PREDICTED: ras-related protein Rab-37-like isoform 2 [Sus scrofa]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ ++
Sbjct: 103 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQA 162
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+E D V +K +PG CC
Sbjct: 163 EEPSFQIRDYVESQKK--RPG----CC 183
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D P + V E A+ FA+++GI ETSAKD NVE+ FMA+T
Sbjct: 118 LVGNKCDLPNRAVSY-ESAKAFADEVGIPFMETSAKDATNVEQAFMAMT 165
>gi|294899961|ref|XP_002776830.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239884031|gb|EER08646.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D K+ V TE+ Q A++ G+ FETSAK +NVE+ F AI V
Sbjct: 133 LVGNKADMAAKRKVSTEEGQALADKYGMTFFETSAKSGLNVEQAFRAIAERV 184
>gi|444727864|gb|ELW68342.1| Ras-related protein Rab-37 [Tupaia chinensis]
Length = 293
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI + K +
Sbjct: 210 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA----KELKYRA 265
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
RQ N + IR + + CC
Sbjct: 266 GRQA-NEPSFQIRDYVESQKKRPGCC 290
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N+NV E+F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEVFFSI 173
>gi|426346641|ref|XP_004040980.1| PREDICTED: ras-related protein Rab-37 isoform 4 [Gorilla gorilla
gorilla]
Length = 186
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 103 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 155
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 156 YRAGHQADEPSFQIRDYVESQKKRSSCC 183
>gi|294914394|ref|XP_002778264.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239886467|gb|EER10059.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV-LRSKKEQ 150
LVGNK+D KKVV ++ + A+Q+GI ETSAK++ NVE+ F+ ++ + R K
Sbjct: 70 LVGNKSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTP 129
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + +R G + CC
Sbjct: 130 QPNRSGAGGPARLRPGQPAHGNQSGCC 156
>gi|300794443|ref|NP_001180153.1| ras-related protein Rab-37 [Bos taurus]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADVSTERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 186 YRATRQADEPSFQIRDYVESQKKRPSCC 213
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|15277822|gb|AAK94004.1| GTP binding protein Rab1a [Scyliorhinus canicula]
Length = 94
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + +
Sbjct: 10 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA 69
Query: 152 ERQVLNSDTVNIRKHTTKP--GGKKKCC 177
VNI+ KP GG CC
Sbjct: 70 TSGGSEKSNVNIQSTPVKPSSGG---CC 94
>gi|348538866|ref|XP_003456911.1| PREDICTED: ras-related protein R-Ras-like [Oreochromis niloticus]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 86 FPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
FP + LVGNK D Q++V+ EDAQ FA + I E SAK+ NV+E F+ + +++ R
Sbjct: 113 FP--MVLVGNKADLEQQRVIPKEDAQAFARENRIHYMEASAKNRYNVDEAFLELVHIIRR 170
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A +ANQ+GI ETSAK NVE+ FM +
Sbjct: 121 LVGNKSDLTTKKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTM 168
>gi|1279590|emb|CAA96432.1| ras-related small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 80
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 102 KKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTV 161
+KVV TE AQ FA+++GI ETSAK+ NVE+ FMA+ + Q TV
Sbjct: 5 QKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTV 64
Query: 162 NIRKHTTKPGGKKKCC 177
IR K CC
Sbjct: 65 QIRGQPVN--QKSGCC 78
>gi|397484434|ref|XP_003813382.1| PREDICTED: ras-related protein Rab-37 isoform 4 [Pan paniscus]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 113 LLGNKADMSGERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 165
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 166 YRAGHQADEPSFQIRDYVESQKKRSSCC 193
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 119 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 175
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 176 PGAASGGERPNLKIDSTPVKPAG-GGCC 202
>gi|449268714|gb|EMC79563.1| Ras-related protein Rab-17 [Columba livia]
Length = 214
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ LVGNK D K+ V TE+ + FA G+ ETSAK N V ++FMAI +L ++E
Sbjct: 127 IALVGNKTDLAAKREVATEEGEEFARTKGLLFMETSAKSNHQVNDIFMAIAQELLEREQE 186
Query: 150 Q 150
+
Sbjct: 187 K 187
>gi|426346637|ref|XP_004040978.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Gorilla gorilla
gorilla]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 186 YRAGHQADEPSFQIRDYVESQKKRSSCC 213
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 92 LVGNKND------DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
LVGNK D + K+ V TE+A+ +AN+ + +E SAK +NV+++F +I +
Sbjct: 120 LVGNKVDLCDEDAEDNKRAVGTEEARSYANEQNLLFYEVSAKTGLNVQQIFQSIGEKLFE 179
Query: 146 SKKEQ----KERQVLNS-DTVNIRKHTTKPGGKKKCC 177
+K E+ K RQ+ +S D VN++ CC
Sbjct: 180 TKSEEIAAAKNRQIGSSNDHVNVQLQRASTNDPTSCC 216
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ E+A+ +A + I ETSAK NINV E+F I + R+
Sbjct: 117 LVGNKCDLADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRN----- 171
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ +++ D V I + T KK CC
Sbjct: 172 EKGLIDPDEVLISNNKTD--NKKGCC 195
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
++GNK+D +K+VV TE + A + GI+ ETSAK NIN++ F + +L ++
Sbjct: 119 ILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKE 178
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + TVNI + +CC
Sbjct: 179 PQDAADRVTVNI----PRERNSNRCC 200
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 115 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 171
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 172 PGAASGGERPNLKIDSTPVKPAG-GGCC 198
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-TNLVLRSKKEQ 150
L+GNK D +K+ V TE Q A+++GI E SAK NIN+++ F ++ +++ R+
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTA 179
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
KE Q N +VN+ + T+ CC
Sbjct: 180 KEYQ--NPSSVNVGAN-TEASRTGNCC 203
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D KVV +E A+ FA+++GI ETSAK+ NVE+ FMA+
Sbjct: 118 LVGNKCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMA 166
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+VV TE Q A+++GI E SAK NIN+++ F ++ + + + +
Sbjct: 122 LIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQ 181
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ S V + + + G KCC
Sbjct: 182 KTDAGVSSGVKVGEQSDN--GGSKCC 205
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 113 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 169
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 170 PGAASGGERPNLKIDSTPVKPAG-GGCC 196
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVL 144
+ L GNK D P K+ + T DA+++A + G+ FETSAK + NV E+F AI L L
Sbjct: 129 IALAGNKLDLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPL 188
Query: 145 RSKKEQKERQVLNSDTVNIRK---HTTKPGG 172
+ R VN+R T PGG
Sbjct: 189 DQAGPRNLRPGQQRAGVNLRPEANQTQGPGG 219
>gi|28376635|ref|NP_783865.1| ras-related protein Rab-37 isoform 3 [Homo sapiens]
gi|26252126|gb|AAH40547.1| RAB37, member RAS oncogene family [Homo sapiens]
gi|119609586|gb|EAW89180.1| RAB37, member RAS oncogene family, isoform CRA_d [Homo sapiens]
gi|158261427|dbj|BAF82891.1| unnamed protein product [Homo sapiens]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 186 YRAGHQADEPSFQIRDYVESQKKRSSCC 213
>gi|338711687|ref|XP_003362562.1| PREDICTED: ras-related protein Rab-37-like [Equus caballus]
Length = 223
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI + K +
Sbjct: 140 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA----KELKYRA 195
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
RQ N + IR + + CC
Sbjct: 196 GRQA-NEPSFQIRDYVESQKKRPGCC 220
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-----NLVLRS 146
L+GNK D K+VV TE Q+ A+++GI E SAK NINVE+ F ++ +V S
Sbjct: 120 LIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADIKKRIVDTS 179
Query: 147 KKEQKERQ 154
K +Q +Q
Sbjct: 180 KIDQAAQQ 187
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V E A+ FA+++GI ETSAKD NVE+ FMA+ S K++
Sbjct: 118 LVGNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMA----ASIKDRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G CC
Sbjct: 174 ASQPANNARPPTVQIRGQPVAQKG--GCC 200
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
L+GNK D +K+VV TE Q+ A+++GI E SAK NINVE+ F ++
Sbjct: 120 LIGNKCDWEEKRVVSTERGQQLADELGIPFMEVSAKSNINVEKAFFSLA 168
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D K+VV T Q+ A++ GI+ FETSAK N NVE++F +
Sbjct: 125 LVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTM 172
>gi|195482441|ref|XP_002102048.1| GE15254 [Drosophila yakuba]
gi|194189572|gb|EDX03156.1| GE15254 [Drosophila yakuba]
Length = 222
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L +VGNK D +++ V ++A +A +G Q ETSAK+N V E+F +T+L+L
Sbjct: 121 ALIIVGNKTDLEEQRSVTHDEALPYARTVGAQYVETSAKENEGVAELFDLLTHLMLEQLS 180
Query: 149 EQKER------QVLNSDTVNIRKHTT-----KPGGKKKCC 177
+++ Q ++DT N + + P G++ CC
Sbjct: 181 QRQPDASPLRLQTSDTDTFNNSEDSEAPDPGDPAGQRSCC 220
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ FA+Q+GI ETSAK+ NVE+ F+ +
Sbjct: 119 LVGNKSDLTSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTM 166
>gi|112983326|ref|NP_001037620.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
gi|102993253|gb|ABF71469.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++VV E ++ A+Q+G++ +ETSAK+NINV+ +F + +++
Sbjct: 129 LVGNKCDMEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDII 180
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 182 QNSTRTNAITLGSAQGGQEPGSGEKRAC 209
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-RSKKEQ 150
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + +L + K++
Sbjct: 108 LVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQR 167
Query: 151 KERQVLNSDTVNIRKHTTK--PGGKKKCC 177
+ N+ T+ + + PG K+ CC
Sbjct: 168 QSSSRTNAITLGGAQAGQEQGPGEKRACC 196
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ +A+Q+GI ETSAK+ +NVE+ FM +
Sbjct: 121 LVGNKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTM 168
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|351711287|gb|EHB14206.1| Ras-related protein Rab-26 [Heterocephalus glaber]
Length = 319
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 235 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPYMETSAKTGLNVDLAFTAIA-------KE 287
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + + R H + G CC
Sbjct: 288 LKQRTMKAPSEPHFRLHDYVKQEGRGASCC 317
>gi|115471033|ref|NP_001059115.1| Os07g0195100 [Oryza sativa Japonica Group]
gi|113610651|dbj|BAF21029.1| Os07g0195100, partial [Oryza sativa Japonica Group]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D K+VV T Q+ A++ G++ FETSAK N NVE++F I
Sbjct: 183 LVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTI 230
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV----LRSK 147
L+GNK+D +K+ V TE + A ++GI ETSAK N NVEE F + V + +
Sbjct: 119 LIGNKSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTA 178
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + VN+ K G CC
Sbjct: 179 AVTQASPAAATGNVNVNS-APKTGAAGGCC 207
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SK 147
+ LVGNK D + V T+D Q FA G+ ETSA + NVEE F I + R SK
Sbjct: 130 IMLVGNKTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISK 189
Query: 148 KE---------QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
K V T+N+ T G KK+CC
Sbjct: 190 KAVALDDGGAGGAGGGVKEGKTINVAASDT-SGEKKQCC 227
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 182 QNSTRTNAITLGSAQAGQEPGPGEKRAC 209
>gi|149455296|ref|XP_001508915.1| PREDICTED: ras-related protein Rab-1B-like, partial
[Ornithorhynchus anatinus]
Length = 108
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 25 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 81
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 82 PGAASGGERPNLKIDSTPVKPAG-GGCC 108
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D +P K+ + T DA+ +A + G+ FETSAK + NV E+F AI +
Sbjct: 126 IALAGNKLDLVTENPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKLPL 185
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ + + V++R G C
Sbjct: 186 DQAGPRNMRTTPRPGVDLRPEAPGTQGAGSC 216
>gi|440895166|gb|ELR47427.1| Ras-related protein Rab-37, partial [Bos grunniens mutus]
Length = 192
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R++++
Sbjct: 109 LLGNKADVSTERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRARRQA 168
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + IR + + CC
Sbjct: 169 DE------PSFQIRDYVESQKKRPSCC 189
>gi|397484428|ref|XP_003813379.1| PREDICTED: ras-related protein Rab-37 isoform 1 [Pan paniscus]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADMSGERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 193 YRAGHQADEPSFQIRDYVESQKKRSSCC 220
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ +A+Q+GI ETSAK+ +NVE+ FM +
Sbjct: 117 LVGNKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTM 164
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV TE A+ +A+ +GI ETSAK+ NVEE F+ + ++R +E
Sbjct: 119 LVGNKCD-MEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIR-LREAS 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + K + KKCC
Sbjct: 177 QSAKPGAGGASGLKLSGGSSRTKKCC 202
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + V E A+ FA+++GI ETSAKD NVE+ FMA+ S K++
Sbjct: 118 LVGNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMA----ASIKDRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q N+ TV IR G CC
Sbjct: 174 ASQPANNARPPTVQIRGQPVAQKG--GCC 200
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K+VV E+AQ +A++ G+ ETSAK +NV ++F+AI +KK
Sbjct: 127 IALAGNKADLGNKRVVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAI------AKKL 180
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKK----KCC 177
K Q N+ T + + G+K CC
Sbjct: 181 PKNEQAGNASTSGQGRRLVESEGQKPATGNCC 212
>gi|119570735|gb|EAW50350.1| hCG2036720 [Homo sapiens]
Length = 108
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 25 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 81
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 82 PGAASGGERPNLKIDSTPVKPAG-GGCC 108
>gi|170590884|ref|XP_001900201.1| small GTP-binding protein domain containing protein [Brugia malayi]
gi|158592351|gb|EDP30951.1| small GTP-binding protein domain containing protein [Brugia malayi]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ LVGNK D+ Q++ V +E Q+ A + G ETSAKDN N+ E+F + + E
Sbjct: 140 IMLVGNKKDEDQRREVSSELGQKLAAKWGTGFIETSAKDNENITELFQRLLAM------E 193
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKC 176
+K L D + ++K G K+KC
Sbjct: 194 KKRTLALTMD-----EESSKSGSKRKC 215
>gi|311266846|ref|XP_003131277.1| PREDICTED: ras-related protein Rab-37-like isoform 3 [Sus scrofa]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ ++
Sbjct: 133 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQA 192
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
+E D V +K +PG CC
Sbjct: 193 EEPSFQIRDYVESQK--KRPG----CC 213
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 90 LRLVGNK----NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D P K+ + T DA+ +A + G+ FETSAK + NV E+F AI
Sbjct: 126 IALAGNKLDLVTDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIA 180
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK D K+VV T Q+ A++ G++ FETSAK N NVE++F I
Sbjct: 125 LVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIA 173
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D + KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + K +
Sbjct: 118 LVGNKCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q +N+ TV IR K CC
Sbjct: 174 ASQPVNNARPPTVQIRGQPVNQ--KSGCC 200
>gi|239611052|gb|EEQ88039.1| ypt5 protein [Ajellomyces dermatitidis ER-3]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 90 LRLVGNK----NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D P K+ + T DA+ +A + G+ FETSAK + NV E+F AI
Sbjct: 117 IALAGNKLDLVTDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIA 171
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ LVGNK+D K V T+DA FA G+ ETSA DN VEE F +I + + R
Sbjct: 119 IMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYR 174
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV +E A+ FA+++GI ETSAK+ NVE+ FMA+ + K +
Sbjct: 118 LVGNKCDLTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q +N+ TV IR K CC
Sbjct: 174 ASQPVNNARPPTVQIRGQPVNQ--KAGCC 200
>gi|145496190|ref|XP_001434086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831499|emb|CAI39317.1| rab_C12 [Paramecium tetraurelia]
gi|124401209|emb|CAK66689.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
LVGNK D + V +AQ+FA + GI+ FETSAK NVEE+F+ + ++L
Sbjct: 116 LVGNKGDLESDRQVSYNEAQQFAKECGIEFFETSAKTANNVEEIFIKMAQIIL 168
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
L+GNK D K+ V E ++ A GI+ FETSAK +INVEE F+A+ +L+
Sbjct: 118 LLGNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILK 171
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLR 29
GI+ FETSAK +INVEE F+A+ +L+
Sbjct: 144 GIRFFETSAKSSINVEESFLALARDILK 171
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKE 149
LVGNK+D D K+ V Q A++ +Q FETSAK+N NV+E+F ++ +++LR K
Sbjct: 118 LVGNKSDMDESKRAVAYSRGQALADEFRMQFFETSAKNNTNVDEVFQSVARDIMLRLKDT 177
Query: 150 QKE 152
Q +
Sbjct: 178 QPD 180
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K++V EDAQ +A G+ ETSAK +NV ++F+AI + +S
Sbjct: 129 IALSGNKADLASKRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNT 188
Query: 150 QKERQVLNSDT-VNIRKHTTKPGGKKKCC 177
+Q + VN+R+ T P CC
Sbjct: 189 PGGQQSSQRNQGVNLRE--TSPQHSGGCC 215
>gi|149723329|ref|XP_001497263.1| PREDICTED: ras-related protein Rab-37-like isoform 2 [Equus
caballus]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI + K +
Sbjct: 133 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA----KELKYRA 188
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
RQ N + IR + + CC
Sbjct: 189 GRQA-NEPSFQIRDYVESQKKRPGCC 213
>gi|50539696|ref|NP_001002318.1| ras-related protein Rab-15 [Danio rerio]
gi|49899166|gb|AAH75754.1| Zgc:86635 [Danio rerio]
Length = 212
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
LVGNK+D+ +K+ V TE + A G+ FETSA N N+ E F + LVL++ K
Sbjct: 118 LVGNKSDEQEKRQVATEQGDKLAKAYGMDFFETSAFTNHNITESFTRLAELVLQANK 174
>gi|260942787|ref|XP_002615692.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
gi|238850982|gb|EEQ40446.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+DD + + V E Q+ A+ + I E SAK N NVE +F + +L+ +K
Sbjct: 123 LVGNKSDDEENRQVSREQGQQLASSLNIPFLEASAKTNENVESIFYELASLI--QEKHID 180
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E V S +++ +T G K CC
Sbjct: 181 EEPVQRSTGIDV--SSTGNGIKNNCC 204
>gi|430812572|emb|CCJ30031.1| unnamed protein product [Pneumocystis jirovecii]
Length = 193
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
+ L GNK D ++ V T DAQ +A + G+ FETSAKD NV +F AI
Sbjct: 88 IALAGNKADLASRRAVETSDAQAYAEEAGLIFFETSAKDAQNVNNLFQAI 137
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K+ V T A+ +A+ +GI ETSAKD+ NVE+ F+ + + +++ Q
Sbjct: 118 LVGNKSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEI-KARMAQA 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
S ++ + K + KK CC
Sbjct: 177 PAGKEGSASIQVGKGSEVT--KKGCC 200
>gi|156366233|ref|XP_001627044.1| predicted protein [Nematostella vectensis]
gi|156213941|gb|EDO34944.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 82 YCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
Y W + + LVGNK D +++VV + ++ A+Q+G++ +ETSAKDN NV+++F + +
Sbjct: 122 YSWA-NAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERLVD 180
Query: 142 LVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKK 174
++ K Q L++D + KPG K
Sbjct: 181 IIC-----DKMSQSLDTDPTIVSGQ--KPGTTK 206
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 90 LRLVGNK----NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D P K+ V T DA+ +A + G+ FETSAK + NV E+F AI
Sbjct: 126 IALAGNKLDLVTDSPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIA 180
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM +
Sbjct: 796 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM 843
>gi|293340566|ref|XP_002724622.1| PREDICTED: ras-related protein Rab-37-like isoform 1 [Rattus
norvegicus]
gi|149054743|gb|EDM06560.1| rCG35079, isoform CRA_b [Rattus norvegicus]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKK 148
+ L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ K
Sbjct: 138 IMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGK 197
Query: 149 EQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ E + IR + + CC
Sbjct: 198 QPDE------PSFQIRDYVESQKKRSSCC 220
>gi|348525216|ref|XP_003450118.1| PREDICTED: ras-related protein Rab-26-like [Oreochromis niloticus]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKK 148
L L+GNK D +VV ED +R A + G+ ETSA+ +NVE F A+ L RS K
Sbjct: 169 LMLLGNKADATHDRVVKREDGERLAKEFGVPFMETSARSGLNVELAFTAVAKELKHRSMK 228
Query: 149 EQKER 153
+ E+
Sbjct: 229 DPNEK 233
>gi|218199254|gb|EEC81681.1| hypothetical protein OsI_25244 [Oryza sativa Indica Group]
gi|222636607|gb|EEE66739.1| hypothetical protein OsJ_23431 [Oryza sativa Japonica Group]
Length = 192
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D K+VV T Q+ A++ G++ FETSAK N NVE++F I
Sbjct: 102 LVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTI 149
>gi|307207614|gb|EFN85274.1| Ras-related protein Rab-3 [Harpegnathos saltator]
Length = 222
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D +++V+ +E ++ A Q+G++ FETSAK+NINV+ +F + +++
Sbjct: 130 LVGNKCDMEEERVISSERGRQLAEQLGVRFFETSAKENINVKAVFEQLVDII 181
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNKND K+ V + A+ FA+++GI ETSAK + NVE+ FM + E K
Sbjct: 118 LVGNKNDLTSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMA-------AEIK 170
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK 174
R + T +PG K
Sbjct: 171 NRMASQTMAAKPGAATIRPGEGK 193
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
LVGNK D +K+VV + A++ G + FETSAKDN+ VEE F+++ VL
Sbjct: 122 LVGNKLDLSEKRVVSEARGRALADEYGFRFFETSAKDNVCVEEAFLSVAKDVL 174
>gi|410985361|ref|XP_003998991.1| PREDICTED: ras-related protein Rab-26 [Felis catus]
Length = 190
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F A+ KE
Sbjct: 106 LMLLGNKVDSAQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAVA-------KE 158
Query: 150 QKER--QVLNSDTVNIRKHTTKPGGKKKCC 177
K+R +V + + + + G CC
Sbjct: 159 LKQRSMKVPSEPRFRLHDYVKREGRGASCC 188
>gi|402593303|gb|EJW87230.1| hypothetical protein WUBG_01858 [Wuchereria bancrofti]
Length = 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D+ Q++ V +E Q+ A + G ETSAKDN N+ E+F + + E+K
Sbjct: 49 LVGNKKDEDQRREVSSELGQKLATKWGTGFIETSAKDNENITELFQRLLAM------EKK 102
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
L D + + K G K+KC
Sbjct: 103 RTLALTMD-----EESGKSGSKRKCS 123
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 90 LRLVGNK----NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK N+ P K+ + T DA+ +A + G+ FETSAK NV E+F AI +
Sbjct: 127 IALAGNKLDLVNEHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKLPL 186
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ + + V++R +T G C
Sbjct: 187 DQAGPRNLRSNPRPGVDLRPESTGTQGAGNC 217
>gi|351701680|gb|EHB04599.1| Ras-related protein Rab-37 [Heterocephalus glaber]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL 144
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI N +
Sbjct: 140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIANFLF 192
>gi|348527766|ref|XP_003451390.1| PREDICTED: ras-related protein Rab-3B-like [Oreochromis niloticus]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
+VGNK D +++VV E + A+Q+G + +E SAK+NINV ++F + +++ E+
Sbjct: 132 MVGNKCDMDEERVVPPEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERV 191
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
+ + + + T KP +KCC
Sbjct: 192 DVEAPAAPGSKTTRLTDKPAQLPQKCC 218
>gi|312072690|ref|XP_003139180.1| small GTP-binding protein domain-containing protein [Loa loa]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ LVGNK D+ Q++ V +E Q+ A++ G ETSAKDN N+ E+F + +
Sbjct: 159 IMLVGNKKDEDQRREVSSELGQKLASKWGTDFIETSAKDNENITELFQRLLAM------- 211
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKC 176
ER+ + T+N + + K G K+KC
Sbjct: 212 --ERKRTLALTMN--EESGKSGSKRKC 234
>gi|170590438|ref|XP_001899979.1| Ras-related protein Rab-3 [Brugia malayi]
gi|158592611|gb|EDP31209.1| Ras-related protein Rab-3, putative [Brugia malayi]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D ++VV E ++ A+Q+G++ FETSAK+NINV+ +F + ++ K
Sbjct: 125 LVGNKCDMDDERVVSCERGKQLADQLGLEFFETSAKENINVKAVFEKLVEIIC-----DK 179
Query: 152 ERQVLNSDTVNIRKHTTKPGGKK 174
+ L+SD T P G++
Sbjct: 180 MAESLDSDPT-----TAHPKGQR 197
>gi|403419531|emb|CCM06231.1| predicted protein [Fibroporia radiculosa]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+Q+ I ETSAK+ NVE+ F+ + K+ K
Sbjct: 116 LVGNKSDLTSKKVVEYSAAKEFADQLTIPFLETSAKNATNVEQAFLTM-------AKQIK 168
Query: 152 ERQVLNSDTVN--IRKHTTKPG 171
+R +S TV + T PG
Sbjct: 169 DRMGSSSSTVGGTGKSSTITPG 190
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV A+++A Q+GI ETSAK++ NVE+ FM + + +++
Sbjct: 118 LVGNKCDLTTKKVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEI-KARVGPP 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ V I + GK CC
Sbjct: 177 STGAAPAGHVKIDQGQPIDTGKSSCC 202
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV +A+ FA+++GI ETSAK+ NVE+ F+ ++
Sbjct: 119 LVGNKSDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMS 167
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 182 QNSTRTNAITLGGAQGGQEPGSGEKRAC 209
>gi|410981792|ref|XP_003997250.1| PREDICTED: ras-related protein Rab-37 [Felis catus]
Length = 340
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 257 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 309
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R + D + IR + CC
Sbjct: 310 YRALWQPDGPSFQIRDFVESQKKRPSCC 337
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-RSKKEQ 150
L+GNK D K+ V E ++ A GI+ FETSAK +INVEE F+++ + +L +S K+Q
Sbjct: 118 LLGNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSKKQ 177
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVL-RSKKEQ 34
GI+ FETSAK +INVEE F+++ + +L +S K+Q
Sbjct: 144 GIRFFETSAKSSINVEESFLSLAHDILQKSSKKQ 177
>gi|338711689|ref|XP_003362563.1| PREDICTED: ras-related protein Rab-37-like [Equus caballus]
Length = 186
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI + K +
Sbjct: 103 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIA----KELKYRA 158
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
RQ N + IR + + CC
Sbjct: 159 GRQA-NEPSFQIRDYVESQKKRPGCC 183
>gi|149054742|gb|EDM06559.1| rCG35079, isoform CRA_a [Rattus norvegicus]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ K+
Sbjct: 133 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGKQP 192
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + IR + + CC
Sbjct: 193 DE------PSFQIRDYVESQKKRSSCC 213
>gi|123481715|ref|XP_001323626.1| GTP-binding protein YPTM1 [Trichomonas vaginalis G3]
gi|121906494|gb|EAY11403.1| GTP-binding protein YPTM1, putative [Trichomonas vaginalis G3]
Length = 201
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
+VGNK D K+ V ++ Q FA+ +G+ ETSAK N++++F+ + V R Q
Sbjct: 119 IVGNKTDLSDKRAVRRDEGQAFADSLGVPFIETSAKTANNIQQLFIQMCQAVSRKFGLQS 178
Query: 152 ERQVLNSDTVNIRKHTTKPG---GKKKCC 177
R + + T +PG GKK CC
Sbjct: 179 PRD------QELDQWTLRPGQSVGKKGCC 201
>gi|268577759|ref|XP_002643862.1| Hypothetical protein CBG02097 [Caenorhabditis briggsae]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L LVGNK D Q++ V + A+R A+++G+ L+E SAK IN EE F +T + +E
Sbjct: 120 LMLVGNKADLDQERKVDFDRAERLASRLGVSLYEVSAKTGINCEEAFHTLT----AAMRE 175
Query: 150 QKERQVLNSD 159
+ LNSD
Sbjct: 176 RLTASSLNSD 185
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV + A FA Q+GI ETSAK+ NVE+ F+ + + + K
Sbjct: 156 LVGNKSDLETKKVVDAKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQI-KDKMGAA 214
Query: 152 ERQVLNSDTVNIR-KHTTKPGGKKKCC 177
N NI+ P CC
Sbjct: 215 SSAQSNQAKANIKVGQAVAPQQSSGCC 241
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV + A+ FA+++GI ETSAK+ NVE+ FM + + Q
Sbjct: 118 LVGNKCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
T+ +R + K CC
Sbjct: 178 SMSSAKPTTIPLRGQVLQ--HKPNCC 201
>gi|397484436|ref|XP_003813383.1| PREDICTED: ras-related protein Rab-37 isoform 5 [Pan paniscus]
Length = 186
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 103 LLGNKADMSGERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 155
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R +D + IR + + CC
Sbjct: 156 YRAGHQADEPSFQIRDYVESQKKRSSCC 183
>gi|76363526|sp|P51156.2|RAB26_RAT RecName: Full=Ras-related protein Rab-26
gi|38303826|gb|AAH61984.1| Rab26 protein [Rattus norvegicus]
gi|149052027|gb|EDM03844.1| RAB26, member RAS oncogene family [Rattus norvegicus]
Length = 257
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 173 LMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIA-------KE 225
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R R H + G CC
Sbjct: 226 LKQRSTKAPSEPRFRLHDYVKREGRGVSCC 255
>gi|449689121|ref|XP_002157570.2| PREDICTED: ras-related protein Rab-10-like, partial [Hydra
magnipapillata]
Length = 144
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
++GNK D K++V E + A + I+ +ETSAKDNI VEE FM +T +LR +
Sbjct: 60 ILGNKCDMNDKRMVSKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGA 119
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + V +++ KP CC
Sbjct: 120 TQDQATTGVVIPKENRAKPA---NCC 142
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPG 55
I+ +ETSAKDNI VEE FM +T +LR + + + V +++ KP
Sbjct: 87 IKFYETSAKDNICVEEAFMRLTQDILRKHQAGATQDQATTGVVIPKENRAKPA 139
>gi|296476035|tpg|DAA18150.1| TPA: RAB37, member RAS oncogene family-like [Bos taurus]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R++++
Sbjct: 133 LLGNKADVSTERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRARRQA 192
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + IR + + CC
Sbjct: 193 DE------PSFQIRDYVESQKKRPSCC 213
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KK V T+ AQ FA+ +GI ETSAK++ NVE F+ + ++ K++
Sbjct: 118 LVGNKCDLVTKKAVDTQMAQEFADSLGIPFLETSAKESSNVETAFIEMA----KNIKKRV 173
Query: 152 ERQVLNSD---------TVNIRKHTTKPGGKKKCC 177
Q NS T N R T G K CC
Sbjct: 174 AAQGANSGATAGGRPLLTGNNRPATNSGGQKSGCC 208
>gi|313220927|emb|CBY31762.1| unnamed protein product [Oikopleura dioica]
gi|313226508|emb|CBY21653.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 82 YCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
Y W + + LV NK D ++VV TE + A Q+G FETSAK+N+NV + F + +
Sbjct: 120 YSWD-SAKVMLVANKADMENERVVSTERGEELARQLGFDFFETSAKENLNVAQSFDRLVD 178
Query: 142 LVLRSKKEQKER--QVLNSDTVNIRKHTTKPGGKKKCC 177
++ E E Q +S+T N+ H K C
Sbjct: 179 VICDKMAESVEESAQAASSNTQNL--HDVGQAESKPPC 214
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV Q FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTTKKVVDNTTCQEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMG 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|355709860|gb|EHH31324.1| Ras-related protein Rab-26, partial [Macaca mulatta]
gi|355756462|gb|EHH60070.1| Ras-related protein Rab-26, partial [Macaca fascicularis]
Length = 191
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI K
Sbjct: 106 ALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------K 158
Query: 149 EQKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
E K+R + R H + G CC
Sbjct: 159 ELKQRSMKTPSEPRFRLHDYVKREGRGASCC 189
>gi|213403714|ref|XP_002172629.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
gi|212000676|gb|EEB06336.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
Length = 217
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 87 PSGL--RLVGNKNDDPQ-KKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN-L 142
P G+ L GNK D Q ++ V DA+ +AN+MG+ FETSAK NV E+F AI N L
Sbjct: 124 PEGIVIALAGNKLDLAQERRAVEKSDAESYANEMGLLFFETSAKTAENVTELFTAIANKL 183
Query: 143 VLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
L+ + Q + ++ ++ T+ G C
Sbjct: 184 PLQEQLTQAKNASPRGVNLSQARNATQTNGACAC 217
>gi|432115938|gb|ELK37080.1| Ras-related protein Rab-37 [Myotis davidii]
Length = 223
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R L + + IR + + CC
Sbjct: 193 YRAGLQAGEPSFQIRDYVESQKQRPGCC 220
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ LVGNK+D + V T++A+ F+ + G+ ETSA D NVE F I + R
Sbjct: 118 IMLVGNKSDLKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSS 177
Query: 150 QKERQVLNS------DTVNIRKHTTKPGGKK--KCC 177
+ Q +S D++ +R P K+ KCC
Sbjct: 178 KALEQAADSIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|307203700|gb|EFN82666.1| Ras-related protein Rab-21 [Harpegnathos saltator]
Length = 243
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L + GNK D + + V E+A+ +A Q+G F TSAK N N+EEMF+ +T +++ E
Sbjct: 121 LAIAGNKVDLEKDRNVAIEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMQHADE 180
Query: 150 QKERQVL 156
+++ L
Sbjct: 181 AEQKSTL 187
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK D D K+ V T Q A++ GI+ FETSAK N NVE++F +I
Sbjct: 125 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSI 173
>gi|403374107|gb|EJY86990.1| RAB-18, putative [Oxytricha trifallax]
Length = 213
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ LVGN+ D +P + V + AQ+FAN G++ ETSA N NV ++F + +L+
Sbjct: 121 IYLVGNQVDRVELNPALRQVPQDKAQKFANDHGLKFLETSAVTNANVTDVFDNLLHLIYE 180
Query: 146 SKKEQKERQVLNSDTVNIRK-HTTK--PGGKKKCC 177
K Q++ Q D +K H + GGKK CC
Sbjct: 181 VK--QRQEQTDGEDGQKTKKLHADQNVEGGKKSCC 213
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV +E+ Q+ AN++GI ETSAK+++ V++ F+++ V++ E
Sbjct: 117 LVGNKCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQRIGESS 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q V+ + T+P CC
Sbjct: 177 --QSAQPGIVDPTQQ-TQPTESTGCC 199
>gi|402907307|ref|XP_003916418.1| PREDICTED: ras-related protein Rab-26 isoform 2 [Papio anubis]
Length = 190
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI K
Sbjct: 105 ALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------K 157
Query: 149 EQKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
E K+R + R H + G CC
Sbjct: 158 ELKQRSMKTPSEPRFRLHDYVKREGRGASCC 188
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ FA+Q+GI ETSAK+ NVE+ F+ +
Sbjct: 142 LVGNKSDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTM 189
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
L+GNK D K+VV TE Q+ A+++GI E SAK NINVE+ F ++
Sbjct: 120 LIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSL 167
>gi|126343561|ref|XP_001362312.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D K +V A+ FA+ +GI ETSAK++INV+E+F+ + +++ KK K
Sbjct: 118 LVGNKSDLVTKNMVDRTIAKEFADSIGIPFLETSAKNSINVDEVFLTMASVI---KKRIK 174
Query: 152 ERQVLNSD 159
V SD
Sbjct: 175 ALPVSTSD 182
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D K+VV +E+ Q+ AN++GI ETSAK+++ V++ F+++ V++ E
Sbjct: 117 LVGNKCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQRIGESS 176
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
Q V+ + T+P CC
Sbjct: 177 --QSAQPGIVDPTQQ-TQPTESTGCC 199
>gi|4557959|pdb|1ZBD|A Chain A, Structural Basis Of Rab Effector Specificity: Crystal
Structure Of The Small G Protein Rab3a Complexed With
The Effector Domain Of Rabphilin-3a
Length = 203
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
LVGNK D ++VV +E ++ A+ +G + FE SAKDNINV++ F + +++ E
Sbjct: 118 LVGNKCDXEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKXSE 175
>gi|444727314|gb|ELW67815.1| Ras-related protein Rab-26 [Tupaia chinensis]
Length = 266
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q+ V ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 182 LMLLGNKVDSAQEHAVRREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 234
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + + R H + G CC
Sbjct: 235 LKQRSMKAPSEPHFRLHDYVEREGRGASCC 264
>gi|432853436|ref|XP_004067706.1| PREDICTED: ras-related protein Rab-3B-like [Oryzias latipes]
Length = 217
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
+VGNK D ++++V E + A+Q+G + +E SAK+NINV ++F + +++ E+
Sbjct: 131 MVGNKCDMEEERIVPLEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERV 190
Query: 152 ERQVLNSDTVNIRKHTTKPGG-KKKCC 177
+ + + + T KP +KCC
Sbjct: 191 DVEAPAAPGTKTTRLTDKPAQLPQKCC 217
>gi|297283256|ref|XP_002802407.1| PREDICTED: ras-related protein Rab-26-like, partial [Macaca
mulatta]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 131 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 183
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 184 LKQRSMKTPSEPRFRLHDYVKREGRGASCC 213
>gi|397484430|ref|XP_003813380.1| PREDICTED: ras-related protein Rab-37 isoform 2 [Pan paniscus]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE
Sbjct: 131 IMLLGNKADMSGERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KE 183
Query: 150 QKERQVLNSD--TVNIRKHTTKPGGKKKCC 177
K R +D + IR + + CC
Sbjct: 184 LKYRAGHQADEPSFQIRDYVESQKKRSSCC 213
>gi|363740987|ref|XP_003642414.1| PREDICTED: ras-related protein Rab-37-like [Gallus gallus]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L+GNK D +++V TED A + G+ ETSAK +NVE F+AI +E
Sbjct: 127 IMLLGNKADVSSERMVRTEDGASLAREYGVPFMETSAKTGMNVELAFLAIA-------RE 179
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKK--CC 177
K+R V D + H +K+ CC
Sbjct: 180 LKQRAVQPPDEPRFQIHDYIEAQQKRSGCC 209
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ F+ + + K+
Sbjct: 118 LVGNKSDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI---KERMG 174
Query: 152 ERQVLNSDTVNIRKHT-TKPGGKKKCC 177
V N TV + + + + G CC
Sbjct: 175 NTTVNNKPTVQVGQGSNVQSGSAGGCC 201
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM +
Sbjct: 158 LVGNKSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMA 206
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMF-MAITNLVLRSKKEQ 150
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + + K++
Sbjct: 108 LVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR 167
Query: 151 KERQVLNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 168 QNSSRTNAITLGSAQAGQEPGPGEKRAC 195
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K++V E+AQ +A+ + ETSAK +NV ++F+AI + +S+ +
Sbjct: 128 IALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 187
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKKCC 177
S V++ + T + K +CC
Sbjct: 188 STSGAAGRSRGVDLHEQTQQ--NKSQCC 213
>gi|348517184|ref|XP_003446115.1| PREDICTED: ras-related protein Rab-3C-like [Oreochromis niloticus]
Length = 218
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L GNK D +++VV ++ + A Q+G + FETSAKDNINV++ F + +L+
Sbjct: 130 LAGNKCDMEEERVVSVDNGRLLAEQLGFEFFETSAKDNINVKQTFERLVDLI 181
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G + FETSAKDNINV++ F + +L+
Sbjct: 155 LGFEFFETSAKDNINVKQTFERLVDLI 181
>gi|432871908|ref|XP_004072037.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 220
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +++ ED QR A++ G FE SAK+NINV+++F + +++
Sbjct: 135 LVGNKCDMEDDRLITREDGQRLADERGFLFFEASAKENINVKQVFEHLVDVICEQMNTST 194
Query: 152 ERQVLNSD 159
+ +NS+
Sbjct: 195 DGNAINSN 202
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++ V TE+ ++ A Q+ + +ETSAKD V+E F A+T + KK
Sbjct: 125 LIGNKTDLGAQRKVSTEEGRKLAEQLNMAFYETSAKDKSMVDEAFFALTRDI---KKRLG 181
Query: 152 ERQVLNSDTVNI---RKHTTKPGGKKKCC 177
E N T + ++ + GKKK C
Sbjct: 182 EHPGPNKSTGTVQVSKQEESSSAGKKKSC 210
>gi|402907305|ref|XP_003916417.1| PREDICTED: ras-related protein Rab-26 isoform 1 [Papio anubis]
Length = 256
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 172 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 224
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 225 LKQRSMKTPSEPRFRLHDYVKREGRGASCC 254
>gi|380811476|gb|AFE77613.1| ras-related protein Rab-26 [Macaca mulatta]
Length = 256
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 172 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 224
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 225 LKQRSMKTPSEPRFRLHDYVKREGRGASCC 254
>gi|291414764|ref|XP_002723624.1| PREDICTED: RAB37, member RAS oncogene family isoform 2 [Oryctolagus
cuniculus]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ ++
Sbjct: 140 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQA 199
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + IR + + CC
Sbjct: 200 HE------PSFQIRDYVESQKQRPSCC 220
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMF----MAITNLVL- 144
+ LVGNK D + VLTEDA+ FA Q G+ ETSA + NVEE F I N+V
Sbjct: 119 IMLVGNKCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSK 178
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
R E ++ ++ + + + K KKK C
Sbjct: 179 RPSFNADEGNIIPTNNLPVEEPNLKETTKKKFC 211
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D KVV TE+A+ A+ +G+ ETSAK++INVE+ F+ +++
Sbjct: 119 LVGNKCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSS 168
>gi|348520672|ref|XP_003447851.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis niloticus]
Length = 211
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L+GNK DD ++ V + A G++ FETSA NIN+ E F +T LVL++ K
Sbjct: 118 LIGNKCDDSLRREVSKNQGTKLAGSYGMEFFETSASKNINISESFKRLTELVLQAHK 174
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 2 GIQLFETSAKDNINVEEMFMAITNLVLRSKK 32
G++ FETSA NIN+ E F +T LVL++ K
Sbjct: 144 GMEFFETSASKNINISESFKRLTELVLQAHK 174
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + +Q+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 152 ERQV-LNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 182 QNSTRTNAITLGGAQAGQEPGPGEKRAC 209
>gi|384487663|gb|EIE79843.1| Ras-like protein 1 [Rhizopus delemar RA 99-880]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 74 WMTICPIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVE 133
+ IC + FP + LVGNK D + V +++ + A Q G Q ETSAK I+VE
Sbjct: 104 YQQICRVKDRDYFP--MVLVGNKCDLESDRQVSSQEGKDLAKQFGCQFIETSAKQKIHVE 161
Query: 134 EMFMAITNLVLRSKKEQKER 153
E F + + R KEQ+ R
Sbjct: 162 EAFFEVVKDIRRYNKEQENR 181
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +VV E + FA+++GI ETSAKD NVE+ FM + + Q
Sbjct: 118 LVGNKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQP 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
TV +R K CC
Sbjct: 178 AMNASRPATVQMRGQPVTQ--KSSCC 201
>gi|332266194|ref|XP_003282098.1| PREDICTED: ras-related protein Rab-37 [Nomascus leucogenys]
Length = 262
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 179 LLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIA-------KELK 231
Query: 152 ER--QVLNSDTVNIRKHTTKPGGKKKCC 177
R Q + + IR + + CC
Sbjct: 232 YRAGQQADEPSFQIRDYVESQKKRSSCC 259
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D K+++ E ++ A + GI+ FETSAK+NIN+E F ++ +L ++ +
Sbjct: 126 LIGNKCDMEDKRLISEERGRKVAEENGIKFFETSAKENINIEIAFNSLAEDILNKQRPVE 185
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + GG CC
Sbjct: 186 DNERKGGVVPGLGDGQAGSGGPGSCC 211
>gi|19424272|ref|NP_598264.1| ras-related protein Rab-26 [Rattus norvegicus]
gi|619734|gb|AAA69955.1| Rab26 [Rattus norvegicus]
Length = 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 106 LMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIA-------KE 158
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R R H + G CC
Sbjct: 159 LKQRSTKAPSEPRFRLHDYVKREGRGVSCC 188
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV T+ ++ A Q+G++ FETSAK+NINV++ F + +++
Sbjct: 127 LVGNKCDMEDERVVSTDRGRQLAEQLGLEFFETSAKENINVKQCFERLVDII 178
>gi|291414766|ref|XP_002723625.1| PREDICTED: RAB37, member RAS oncogene family isoform 3 [Oryctolagus
cuniculus]
Length = 186
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVLRSKKEQ 150
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI L R+ ++
Sbjct: 103 LLGNKADVSSERVIRSEDGEMLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQA 162
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
E + IR + + CC
Sbjct: 163 HE------PSFQIRDYVESQKQRPSCC 183
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVL-----RS 146
++GNK D K+VV E + A + I+ ETSAK NIN+E F + +L R
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTAGRE 178
Query: 147 KKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
E ER V++ R ++ K G KCC
Sbjct: 179 SAENPERVVID------RGNSDKAPGYNKCC 203
>gi|46577707|sp|Q9JKM7.2|RAB37_MOUSE RecName: Full=Ras-related protein Rab-37; Flags: Precursor
gi|26341240|dbj|BAC34282.1| unnamed protein product [Mus musculus]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R D + IR + + CC
Sbjct: 193 YRAGRQPDEPSFQIRDYVESQKKRSSCC 220
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D +K+ V TE Q+ A+++GI E SAK+NIN+E+ F + + + + K
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSK 179
Query: 152 ERQV 155
Q
Sbjct: 180 SEQA 183
>gi|440296530|gb|ELP89334.1| hypothetical protein EIN_286800 [Entamoeba invadens IP1]
Length = 193
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 73 GWMTICPIIYCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINV 132
++ PI+ C GNK+D + V E+ ++ A + + +ETSAK+ IN+
Sbjct: 112 AYIEHIPIVLC----------GNKSDLESVRTVSIEEGEKLAEEWRVSFYETSAKNKINI 161
Query: 133 EEMFMAITNLVLRSKKEQKE 152
E+F+ + N ++R+K +QK+
Sbjct: 162 NEIFIEVVNDIVRTKYKQKQ 181
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSKKEQKE 36
+ +ETSAK+ IN+ E+F+ + N ++R+K +QK+
Sbjct: 148 VSFYETSAKNKININEIFIEVVNDIVRTKYKQKQ 181
>gi|193211445|ref|NP_001123226.1| Rab-protein 14 [Nasonia vitripennis]
Length = 218
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D +++ V E+A++FA++ G+ E SAK NVEE F+ + +S Q
Sbjct: 121 LIGNKSDLDEQRDVTYEEAKQFADENGLMFVEASAKTGDNVEEAFLETAKKIFQSI--QD 178
Query: 152 ERQVLNSDTVNIRKHTTKPG 171
R LN+ ++ + ++PG
Sbjct: 179 GRLDLNAAESGVQHNPSQPG 198
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D +P K+ + T DA+ +A + G+ FETSAK NV+E+F AI +
Sbjct: 126 IALAGNKLDLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKLPL 185
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + + V++R G C
Sbjct: 186 DQAGPRNLRTNTRPGVDLRPEAAGTQGANGCA 217
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ E+A+ +A + I ETSAK NINV E+F I + R+
Sbjct: 117 LVGNKCDLADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRN----- 171
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ +++ D V I + K KK CC
Sbjct: 172 EKGLIDPDEVVISNN--KNENKKGCC 195
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
+ L GNK+D K++V E+AQ +A++ G+ ETSAK +NV ++F+AI N + +S+
Sbjct: 128 IALAGNKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSE 185
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV E ++ A+Q+G++ FETSAK+N+NV+ +F + +++
Sbjct: 131 LVGNKCDMEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFERLVDII 182
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ +A+Q+GI ETSAK+ NVE+ FM +
Sbjct: 121 LVGNKSDMETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTM 168
>gi|73959514|ref|XP_853648.1| PREDICTED: ras-related protein Rab-26 [Canis lupus familiaris]
Length = 244
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q++VV +D ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 160 LMLLGNKVDSAQERVVKRKDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 212
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + + R H + G CC
Sbjct: 213 LKQRSMKAPSEPHFRLHDYVKREGQGTSCC 242
>gi|254939625|ref|NP_067386.3| ras-related protein Rab-37 isoform 1 [Mus musculus]
gi|7677422|gb|AAF67162.1|AF233582_1 GTPase Rab37 [Mus musculus]
gi|26333417|dbj|BAC30426.1| unnamed protein product [Mus musculus]
gi|26333651|dbj|BAC30543.1| unnamed protein product [Mus musculus]
gi|112293035|dbj|BAF02895.1| Rab37 [Mus musculus]
gi|118341700|gb|AAI28021.1| RAB37, member of RAS oncogene family [Mus musculus]
gi|148702512|gb|EDL34459.1| RAB37, member of RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R D + IR + + CC
Sbjct: 193 YRAGRQPDEPSFQIRDYVESQKKRSSCC 220
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM + + KK
Sbjct: 118 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMW 174
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+ N++ +T KP G CC
Sbjct: 175 PGAASGGERPNLKIDSTPVKPAG-GGCC 201
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SK 147
+ LVGNK+D + V TE+A+ FA + G+ ETSA D NVE F I + R S
Sbjct: 118 IMLVGNKSDLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSS 177
Query: 148 K--EQKERQV--LNSDTVNIRKHTTKPG-GKKKCC 177
K EQ + + + DT+ + P KCC
Sbjct: 178 KSLEQSDDPIKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|328866453|gb|EGG14837.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 231
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMF 136
L+GNK D +++VV E+AQRFA + ETSAKDN NVE++F
Sbjct: 116 LIGNKCDAKERRVVTLEEAQRFAKSNDLIFIETSAKDNTNVEKVF 160
>gi|322793255|gb|EFZ16912.1| hypothetical protein SINV_14392 [Solenopsis invicta]
Length = 265
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D ++ V E+A++FA++ G+ E SAK NVEE F+ + +S Q
Sbjct: 168 LIGNKSDLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSI--QD 225
Query: 152 ERQVLNSDTVNIRKHTTKPG 171
R LN+ ++ + ++PG
Sbjct: 226 GRLDLNAAESGVQHNPSQPG 245
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ F+ + + K+
Sbjct: 118 LVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI---KERMG 174
Query: 152 ERQVLNSDTVNIRKHT-TKPGGKKKCC 177
V N TV + + + + G CC
Sbjct: 175 NTTVNNKPTVQVGQGSNVQSGSAGGCC 201
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D K+ V T+ AQ +A Q+GI ETSAK + NVE+ F+ + +
Sbjct: 117 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMAS 166
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV----LRSK 147
L+GNK+D +K+ V TE + A ++GI ETSAK N NVEE F + V + +
Sbjct: 119 LIGNKSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTA 178
Query: 148 KEQKERQVLNSDTVNIRKHTTKPGGKKKCC 177
+ + VN+ K G CC
Sbjct: 179 AVTQASPAAAAGNVNVNS-APKSGATGGCC 207
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D K+ V T+ AQ +A Q+GI ETSAK + NVE+ F+ + +
Sbjct: 121 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMAS 170
>gi|413950279|gb|AFW82928.1| ras protein Rab11C [Zea mays]
Length = 182
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
LVGNK D + V T+DA+ FA G+ ETSA + NVEE F I + R SKK
Sbjct: 86 LVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKP 145
Query: 150 QKERQ-------VLNSDTVNIRKHTTKPGGKKKCC 177
+ V T+++ KK+CC
Sbjct: 146 VASDEVGAGQGGVKEGKTIDVATGADAAAHKKQCC 180
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D K+ V T+ AQ +A Q+GI ETSAK + NVE+ F+ + +
Sbjct: 120 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMAS 169
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK D K+ V T+ AQ +A Q+GI ETSAK + NVE+ F+ + +
Sbjct: 121 LVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMAS 170
>gi|60653095|gb|AAX29242.1| RAB26 member RAS oncogene family [synthetic construct]
gi|61365273|gb|AAX42682.1| RAB26 member RAS oncogene family [synthetic construct]
Length = 191
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI K
Sbjct: 105 ALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------K 157
Query: 149 EQKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
E K+R + R H + G CC
Sbjct: 158 ELKQRSMKAPSEPRFRLHDYVKREGRGASCC 188
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMF-MAITNLVLRSKKEQ 150
LVGNK+D Q + V TE+A+ FA G+ ETSA D+ NVE F + + + K++
Sbjct: 122 LVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR 181
Query: 151 KERQVLNSDTVNIRKHTTKPG-GKKKCC 177
+ N+ T+ + +PG G+K+ C
Sbjct: 182 QNSSRTNAITLGSAQAGQEPGPGEKRAC 209
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +K+ V + A+ FA+++GI ETSAKD NVE+ F+ + V R Q
Sbjct: 118 LVGNKCDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQL 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
++TV ++ + G CC
Sbjct: 178 TEGNRKANTVEMKGQPLQQKG--GCC 201
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 92 LVGNKND-DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFM 137
LVGNK D D ++ V T Q A++ GI+ FETSAK N+NVEE+F
Sbjct: 125 LVGNKADMDESERAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF 171
>gi|332029969|gb|EGI69794.1| Ras-related protein Rab-14 [Acromyrmex echinatior]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D ++ V E+A++FA++ G+ E SAK NVEE F+ + +S Q
Sbjct: 121 LIGNKSDLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSI--QD 178
Query: 152 ERQVLNSDTVNIRKHTTKPG 171
R LN+ ++ + ++PG
Sbjct: 179 GRLDLNAAESGVQHNPSQPG 198
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
+ L GNK D K+VV ++AQ +A++ G+ ETSAK +NV ++F+AI +KK
Sbjct: 128 IALAGNKADLANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAI------AKKL 181
Query: 150 QKERQVLNSDTVNIRKHTTKPGGKKK----CC 177
K Q N+ T + + G+K CC
Sbjct: 182 PKNEQSGNASTSGQGRRLVESDGQKAATSNCC 213
>gi|426380780|ref|XP_004057039.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-26 [Gorilla
gorilla gorilla]
Length = 265
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 181 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 233
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 234 LKQRSMKAPSEPRFRLHDYVKREGRGASCC 263
>gi|326929096|ref|XP_003210707.1| PREDICTED: ras-related protein Rab-26-like [Meleagris gallopavo]
Length = 233
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D Q +VV ED ++ A + G+ ETSAK +NVE F AI KE
Sbjct: 149 LMLLGNKVDSAQDRVVKREDGEKLAKEYGVPFMETSAKSGLNVELAFTAIA-------KE 201
Query: 150 QKER--QVLNSDTVNIRKHTTKPGGKKKCC 177
K R ++ N + + K CC
Sbjct: 202 LKHRSMKLPNEPKFKLHDYVKKEVRGSGCC 231
>gi|307173866|gb|EFN64623.1| Ras-related protein Rab-14 [Camponotus floridanus]
gi|307200826|gb|EFN80879.1| Ras-related protein Rab-14 [Harpegnathos saltator]
Length = 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK+D ++ V E+A++FA++ G+ E SAK NVEE F+ + +S Q
Sbjct: 102 LIGNKSDLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSI--QD 159
Query: 152 ERQVLNSDTVNIRKHTTKPG 171
R LN+ ++ + ++PG
Sbjct: 160 GRLDLNAAESGVQHNPSQPG 179
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI-TNLVLRSKKEQ 150
L+GNK D +K+VV TE Q+ A+++GI E SAK N N+++ F ++ ++ R
Sbjct: 120 LIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKTNTNIDKAFYSLAADIKKRIIDTS 179
Query: 151 KERQVLNSDTVNIRKHTTKPGGKKKCC 177
K Q VN+ + G KCC
Sbjct: 180 KPDQAAAGQAVNVGDKSGSESG-VKCC 205
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ +A+Q+GI ETSAK+ NVE+ FM +
Sbjct: 121 LVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTM 168
>gi|114660442|ref|XP_510740.2| PREDICTED: ras-related protein Rab-26 [Pan troglodytes]
gi|20379080|gb|AAM21100.1|AF498952_1 small GTP binding protein RAB26 [Homo sapiens]
gi|5931612|dbj|BAA84707.1| RAB-26 [Homo sapiens]
gi|60656145|gb|AAX32636.1| RAB26 member RAS oncogene family [synthetic construct]
gi|60813821|gb|AAX36276.1| RAB26 member RAS oncogene family [synthetic construct]
gi|61355174|gb|AAX41110.1| RAB26 member RAS oncogene family [synthetic construct]
gi|189054283|dbj|BAG36803.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI K
Sbjct: 105 ALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------K 157
Query: 149 EQKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
E K+R + R H + G CC
Sbjct: 158 ELKQRSMKAPSEPRFRLHDYVKREGRGASCC 188
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT-NLVL 144
+ L GNK D P K+ + T DA+++A + G+ FETSAK + NV+E+F AI L +
Sbjct: 128 IALAGNKLDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKLPI 187
Query: 145 RSKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ R VN+R + G C
Sbjct: 188 DQAGPRNLRPGQQRPGVNLRPEANQTQGPAGC 219
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ FA+ +GIQ ETSAK+ NVE+ F+ +
Sbjct: 118 LVGNKSDMADKKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTM 165
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A +ANQ+GI ETSAK NVE+ FM +
Sbjct: 121 LVGNKSDLTTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTM 168
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D P K+ + T DA+ +A + G+ FETSAK + NV+E+F AI +
Sbjct: 126 IALAGNKLDLVTEHPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKLPL 185
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGGKKKC 176
+ + + V++R G C
Sbjct: 186 DQAGPRNLRTTPRPGVDLRPEAPGTQGAGAC 216
>gi|254939635|ref|NP_001157225.1| ras-related protein Rab-37 isoform 2 [Mus musculus]
gi|26337951|dbj|BAC32661.1| unnamed protein product [Mus musculus]
gi|148702511|gb|EDL34458.1| RAB37, member of RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 133 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 185
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R D + IR + + CC
Sbjct: 186 YRAGRQPDEPSFQIRDYVESQKKRSSCC 213
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV E ++ A+Q+G++ FETSAK+N+NV+ +F + +++
Sbjct: 131 LVGNKCDMEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFERLVDII 182
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
LVGNK+D KKVV A+ FA+ +GI ETSAK+ NVE+ FM +
Sbjct: 249 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA 297
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KVV E A+ FA+++GI ETSAK+ NVE+ FMA+ + K +
Sbjct: 118 LVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI----KNRM 173
Query: 152 ERQVLNS---DTVNIRKHTTKPGGKKKCC 177
Q +N+ TV IR K CC
Sbjct: 174 ASQPVNNARPPTVQIRGQPVNQ--KSGCC 200
>gi|449550450|gb|EMD41414.1| rab-type small GTP-binding protein [Ceriporiopsis subvermispora B]
Length = 209
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
L+GNK+D K+ V TE Q AN++GI+ ETSAK N VEE F +
Sbjct: 119 LIGNKSDWTDKRAVTTEQGQELANELGIKFMETSAKINEGVEEAFFTL 166
>gi|397469236|ref|XP_003806267.1| PREDICTED: ras-related protein Rab-26 [Pan paniscus]
Length = 190
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 89 GLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKK 148
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI K
Sbjct: 105 ALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------K 157
Query: 149 EQKERQVLNSDTVNIRKHTT--KPGGKKKCC 177
E K+R + R H + G CC
Sbjct: 158 ELKQRSMKAPSEPRFRLHDYIKREGRGASCC 188
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR--SKKE 149
LVGNK+D + V T++A+ FA + G+ ETSA D+ NVE F I + R S+K+
Sbjct: 121 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ 180
Query: 150 QKERQ----VLNSDTVNIRKHTTKPGGKKKCC 177
+R+ +++ V+I+ T+ K +CC
Sbjct: 181 MSDRRDNDMSPSNNVVSIQVQPTENKPKMQCC 212
>gi|46361978|ref|NP_055168.2| ras-related protein Rab-26 [Homo sapiens]
gi|134044256|sp|Q9ULW5.3|RAB26_HUMAN RecName: Full=Ras-related protein Rab-26
gi|52854304|gb|AAU88191.1| Ras-related oncogene protein [Homo sapiens]
gi|119605958|gb|EAW85552.1| RAB26, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKE 149
L L+GNK D ++VV ED ++ A + G+ ETSAK +NV+ F AI KE
Sbjct: 172 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA-------KE 224
Query: 150 QKERQVLNSDTVNIRKH--TTKPGGKKKCC 177
K+R + R H + G CC
Sbjct: 225 LKQRSMKAPSEPRFRLHDYVKREGRGASCC 254
>gi|47217500|emb|CAG10880.1| unnamed protein product [Tetraodon nigroviridis]
Length = 221
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L GNK D +++VV + + A Q+G + FETSAKDNINV++ F + +L+
Sbjct: 133 LAGNKCDMEEERVVSVDSGRLLAEQLGFEFFETSAKDNINVKQTFERLVDLI 184
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G + FETSAKDNINV++ F + +L+
Sbjct: 158 LGFEFFETSAKDNINVKQTFERLVDLI 184
>gi|464553|sp|P35281.1|RAB10_RAT RecName: Full=Ras-related protein Rab-10
gi|455344|gb|AAA41991.1| RAB10 [Rattus norvegicus]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+ NK D K+VV ++ A + I+ FETSAK NIN+E+ F+ + +LR K K
Sbjct: 119 LLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILR-KTPVK 177
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E NS+ V+I G K KCC
Sbjct: 178 EP---NSENVDISSGGGVTGWKSKCC 200
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 3 IQLFETSAKDNINVEEMFMAITNLVLRSKKEQKERQVLNSDTVNIRKHTTKPGGKKKVC 61
I+ FETSAK NIN+E+ F+ + +LR K KE NS+ V+I G K K C
Sbjct: 146 IRFFETSAKANINIEKAFLTLPEDILR-KTPVKEP---NSENVDISSGGGVTGWKSKCC 200
>gi|409046611|gb|EKM56091.1| hypothetical protein PHACADRAFT_257157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
++GNK+D +++VV + A+ FA+Q+GI L ETSAK + VE+ F+A+ V
Sbjct: 118 ILGNKSDLAERRVVEHDTAKEFADQLGIPLLETSAKTSAGVEDAFIAMAKQV 169
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
L+GNK D +K+ V E Q A+++GI E SAK NIN+EE F ++ N
Sbjct: 120 LIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLAN 169
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D +P K+ + T DA+ +A + G+ FETSAK + NV E+F AI +
Sbjct: 126 IALAGNKLDLVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPL 185
Query: 146 SKKEQKERQVLNSDTVNIRKHT--TKPGGKKKC 176
+ + + V++R T+ GG C
Sbjct: 186 DQAGPRNMRTAPRPGVDLRPEAPGTQSGGACNC 218
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 90 LRLVGNKND----DPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLR 145
+ L GNK D P K+ V T DA+ +A + G+ FETSAK NV+E+F AI +
Sbjct: 125 IALAGNKADLVAEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKLPI 184
Query: 146 SKKEQKERQVLNSDTVNIRKHTTKPGG 172
+ Q+ +R +PGG
Sbjct: 185 EQATQR----------GMRGAAGRPGG 201
>gi|154275612|ref|XP_001538657.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
gi|150415097|gb|EDN10459.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 90 LRLVGNK----NDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAIT 140
+ L GNK D P K+ + T DA+ +A + G+ FETSAK + NV E+F AI
Sbjct: 90 IALAGNKLDLVTDSPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIA 144
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK+D ++ V TE+AQ FA++ G+ ETSA D+ NVE F + +
Sbjct: 120 LVGNKSDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAI 171
>gi|410922738|ref|XP_003974839.1| PREDICTED: ras-related protein Rab-3C-like [Takifugu rubripes]
Length = 219
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
L GNK D +++VV + + A Q+G + FETSAKDNINV++ F + +L+
Sbjct: 131 LAGNKCDMDEERVVSVDSGRLLAEQLGFEFFETSAKDNINVKQTFERLVDLI 182
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 1 MGIQLFETSAKDNINVEEMFMAITNLV 27
+G + FETSAKDNINV++ F + +L+
Sbjct: 156 LGFEFFETSAKDNINVKQTFERLVDLI 182
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D KKVV A+ FA+Q+ I ETSAK+ NVE+ FM + + R++
Sbjct: 118 LVGNKCDLTNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEIKRAQGPDN 177
Query: 152 ERQVLNSDTVNIRKHTT--KPGGKKKCC 177
+TV I + + KK CC
Sbjct: 178 GHVTPGGNTVRITPSSQPLQQDKKKGCC 205
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 90 LRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
+ L GNK+D K++V E+AQ +A++ G+ ETSAK +NV ++F+AI N + +S+
Sbjct: 130 IALAGNKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSE 187
>gi|354466525|ref|XP_003495724.1| PREDICTED: ras-related protein Rab-37-like [Cricetulus griseus]
Length = 223
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
L+GNK D ++V+ +ED + A + G+ ETSAK +NVE F+AI KE K
Sbjct: 140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIA-------KELK 192
Query: 152 ERQVLNSD--TVNIRKHTTKPGGKKKCC 177
R D + IR + + CC
Sbjct: 193 YRAGRQPDEPSFQIRDYVESQKKRPSCC 220
>gi|341881403|gb|EGT37338.1| hypothetical protein CAEBREN_30856 [Caenorhabditis brenneri]
Length = 283
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLV 143
LVGNK D ++VV E ++ A+Q+G++ FETSAK+NINV+ +F + ++
Sbjct: 196 LVGNKCDMDAERVVSMERGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 247
>gi|47216418|emb|CAG01969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 82 YCWLFPSGLRLVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
Y W L LVGNK D +++VV ++ ++ ++Q+G + FE SAKDNINV++ F + +
Sbjct: 122 YSWDNAQVL-LVGNKCDMEEERVVASQRGRQLSDQLGFEFFEASAKDNINVKQTFERLVD 180
Query: 142 LV 143
++
Sbjct: 181 II 182
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +KVV + A+ FA MGI ETSAK+ NVEE F+++ + +++
Sbjct: 120 LVGNKTDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDI-KNRLADI 178
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKC 176
+ S+ V+I+ GK+ C
Sbjct: 179 QDSPSKSEDVDIKAKKPIKSGKRMC 203
>gi|290981140|ref|XP_002673289.1| ras family small GTPase [Naegleria gruberi]
gi|284086871|gb|EFC40545.1| ras family small GTPase [Naegleria gruberi]
Length = 195
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSK 147
LVGNK D ++V+ ++ ++FA Q+ I ETSAK +NV+E FMA+ V +SK
Sbjct: 120 LVGNKCDLESERVISADEGKQFAKQLSIPSLETSAKQRLNVDEAFMALVREVRKSK 175
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITN 141
LVGNK+D +VV E A+ FA+++GI ETSAK NVEE F+ +
Sbjct: 125 LVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMAG 174
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAI 139
LVGNK+D KKVV A+ FA+Q+GI ETSAK+ NVE+ F+ +
Sbjct: 119 LVGNKSDLTNKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTM 166
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 92 LVGNKNDDPQKKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITNLVLRSKKEQK 151
LVGNK D +V+ E+A+ +A + I ETSAK NINV E+F I + R+
Sbjct: 117 LVGNKCDLDNSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRN----- 171
Query: 152 ERQVLNSDTVNIRKHTTKPGGKKKCC 177
E+ +++ D V I + K KK CC
Sbjct: 172 EKGLIDPDEVVISNN--KNENKKGCC 195
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,627,737,021
Number of Sequences: 23463169
Number of extensions: 99116854
Number of successful extensions: 281969
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7251
Number of HSP's successfully gapped in prelim test: 1927
Number of HSP's that attempted gapping in prelim test: 267039
Number of HSP's gapped (non-prelim): 17126
length of query: 177
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 44
effective length of database: 9,238,593,890
effective search space: 406498131160
effective search space used: 406498131160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)