BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14161
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 131 bits (329), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/86 (77%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ K + DK G V LVPEESEDMWHAYNLI +GDSVR++TIRKVQ+E+ TGSSTSS
Sbjct: 1 MKLLGKYV-DKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LTI+VESIDFDTQACVLRLKG
Sbjct: 60 RVRTTLTIAVESIDFDTQACVLRLKG 85
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLVHK+I +KD +G V L+P+E+EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS SS
Sbjct: 1 MKLVHKDI-EKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVETIDFDSQACQLRVKG 85
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV KNI +KD +G V LVPEE EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKNI-EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV KNI +KD +G V LVPEE EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKNI-EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV K+I +KD +G V LVPEE EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKDI-EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV K+I +KD +G V LVPEE EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKDI-EKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV K+I +KD +G V LVPEE EDMWH +NL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKDI-EKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKLV K++ +KD +G V L+PEE EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLVRKDL-EKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
R+RT LT+ VE+IDFD+QAC LR+KG
Sbjct: 60 RIRTTLTLCVEAIDFDSQACQLRVKG 85
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 119 bits (297), Expect = 6e-27, Method: Composition-based stats.
Identities = 58/86 (67%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ K+I +KD +G V L+PEE+EDMWH YNL+ GDS++ASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLIRKDI-EKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RVRT LTI VE+IDFD+QAC LR+KG
Sbjct: 60 RVRTTLTICVETIDFDSQACQLRVKG 85
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ KNI +K+ SG + + PEE EDMWH YN++ GD ++AST+R+V TGS++ S
Sbjct: 1 MKLIQKNI-EKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RV L I VE++DFDT+A L +KG
Sbjct: 60 RVVMKLRILVENMDFDTKAAQLHIKG 85
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MK + I ++D +G V L+ EE+EDMWH YNLI GD ++ASTIRKV SE++TG+++S
Sbjct: 1 MKQFKRGI-ERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQ 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
RV TMLT+SVESIDFD A L LKG
Sbjct: 60 RVHTMLTVSVESIDFDPGAQELHLKG 85
>sp|A2BL82|PELO_HYPBU Protein pelota homolog OS=Hyperthermus butylicus (strain DSM 5456
/ JCM 9403) GN=pelA PE=3 SV=1
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 13 KSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K G+V +VPE ++D+W +I GD VRA T+R++ + GS SSR+ +LT+ VE+
Sbjct: 9 KRGLVRVVPETTDDIWLLSTVIQPGDLVRAKTLREIHF-GDRGSGRSSRIPMVLTVRVEA 67
Query: 73 IDFDTQACVLRLKG 86
++F LR++G
Sbjct: 68 VEFQAFTTRLRIRG 81
>sp|A3MX13|PELO_PYRCJ Protein pelota homolog OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=pelA PE=3 SV=1
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 12 DKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVE 71
+K VV +VPE ED++ Y LI GD VR T+R+ + E G+ RV+ L ISVE
Sbjct: 7 EKRRVVRIVPEREEDLYFIYLLIDRGDIVRGWTVREYKPE---GAKEGERVKMYLGISVE 63
Query: 72 SIDFDTQACVLRLKG 86
I++ LR++G
Sbjct: 64 KIEYHKFRSSLRVRG 78
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pelA PE=1 SV=1
Length = 344
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
M++V +N+ +D G + L+PE +D+WH +I +GD V A+T R QS S+ S
Sbjct: 1 MQIVEENL--RDNEGEIKLIPETLDDLWHLRFIIEKGDVVFATTKRASQS-SDKLRSDKE 57
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
V L I VE ++F A LR+ G
Sbjct: 58 MVTVRLGIEVEKVEFHRFANRLRVSG 83
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-- 65
+ + +K+GV+ LVPE +D+WH ++I EGD + A T R++Q S + V+
Sbjct: 4 VEEDEKNGVIELVPETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFY 63
Query: 66 LTISVESIDFDTQACVLRLKG 86
L I VE++ F LR G
Sbjct: 64 LGIRVETVSFHIYTGRLRATG 84
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MK+V ++ K G+V LVPE +D+WH +++ GDSV + T R++Q NTG S
Sbjct: 1 MKIVKQD----KKEGIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQ--DNTGDKLRS 54
Query: 61 ----RVRTMLTISVESIDFDTQACVLRLKG 86
+ L I VE+I F LRL G
Sbjct: 55 DRGVKKTFTLRIDVENITFHIFTGKLRLTG 84
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=pelA PE=3 SV=2
Length = 347
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
M+++ +N+ + G ++LV E +D+WH +L++ GD V A+T RK+ ++ +
Sbjct: 1 MRVIKRNL--RGDEGEISLVAESLDDLWHLKHLVSPGDLVFATTQRKISGATDKLRPEKA 58
Query: 61 RVRTM-LTISVESIDFDTQACVLRLKG 86
RT+ L ISVE+++F T + LR+ G
Sbjct: 59 ERRTVRLGISVEAVEFHTYSNWLRIHG 85
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSE--SNTGSST 58
MK+V K+++ G + ++PE +D+WH Y+++ +GD V A R+V+ E
Sbjct: 1 MKVVEKDLD----KGYIEVLPETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDK 56
Query: 59 SSRVRTMLTISVESIDFDTQACVLRLKG 86
R L + VE ++FD A LR+KG
Sbjct: 57 GERKPVYLGVRVEDVEFDKYANRLRIKG 84
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
MK++ K++ + G + ++PE+ +D+W YN+I D V A+T R ++ + +S+S
Sbjct: 1 MKILEKDL----RKGYLKILPEDQDDLWALYNIIKPLDRVTATTSRDIK---HGETSSSR 53
Query: 61 RVRTMLTISVESIDFDTQACVLRLKG 86
R+ LTI V++++F LR++G
Sbjct: 54 RIPMTLTIEVKTLEFQPFTERLRIRG 79
>sp|B1Y9M9|PELO_PYRNV Protein pelota homolog OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=pelA PE=3 SV=1
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 13 KSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K V +VPE ED++ Y L+ GD VR T+R+ + E G+ RV+ L + VES
Sbjct: 8 KRRTVRVVPEREEDLYFVYLLVERGDVVRGWTVREYKPE---GAKEGERVKMYLAVRVES 64
Query: 73 IDFDTQACVLRLKG 86
+++ LR++G
Sbjct: 65 LEYHKFRGSLRIRG 78
>sp|A1RRT7|PELO_PYRIL Protein pelota homolog OS=Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189) GN=pelA PE=3 SV=1
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 13 KSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K ++ LVPE ED++ Y LI +GD +R T+R+ + + G R++ L I VES
Sbjct: 8 KRRIIKLVPEREEDLYFIYLLIDKGDIIRGWTVREYKPD---GVKEGERIKIYLAIKVES 64
Query: 73 IDFDTQACVLRLKG 86
+++ LR++G
Sbjct: 65 LEYHKFRGSLRIRG 78
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 15 GVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESI 73
G + L PE S+D+WH +NLIT G V A+T+R V+ S+ + L I VE +
Sbjct: 13 GEIRLFPENSDDLWHLHNLITPGSLVYATTLRSVEGSQDKIRPEKQEKRPVRLGIRVEDV 72
Query: 74 DFDTQACVLRLKG 86
+F + LR+ G
Sbjct: 73 EFHEYSIRLRVFG 85
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pelA PE=3 SV=1
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV-RTML 66
+ +K K G V + E +D+WH Y++IT GD V A T+RK S++ V L
Sbjct: 4 LEEKPKEGKVKIKVETLDDLWHLYHIITPGDVVYAKTLRKQSQRSDSLRPEKVEVIPVFL 63
Query: 67 TISVESIDFDTQACVLRLKG 86
+ VE I+F A LR+ G
Sbjct: 64 GVKVEKINFHKFANQLRVTG 83
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pelA PE=3 SV=1
Length = 347
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 6 KNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM 65
K I + + ++ L+PE +D+W YN+I EGD + A T R+VQ + + + R M
Sbjct: 2 KIIEEIPQKNIIKLMPENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKRKM 61
Query: 66 -LTISVESIDFDTQACVLRLKG 86
L I V++++FD +R+ G
Sbjct: 62 FLGIEVKNVEFDENTKRVRILG 83
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8)
GN=pelA PE=3 SV=1
Length = 341
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
KD G + L PE +D+WH +L++ GD V A+T R V+ ++ R + L +
Sbjct: 9 KDNYGEIRLFPESIDDLWHLQHLVSPGDLVFATTFRSVEGATDKIRPEKVEKRPVRLGVR 68
Query: 70 VESIDFDTQACVLRLKG 86
VE ++F LR+ G
Sbjct: 69 VEKVEFSHHGVRLRISG 85
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 9 NDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSR---VRTM 65
N K G++ +VPE +D+WH +++ D V T R++Q ++N+G + + R +
Sbjct: 5 NQDKKQGLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRIQ-DNNSGKTRADRGVKKKFF 63
Query: 66 LTISVESIDFDTQACVLRLKG 86
L I VE I+F +LR G
Sbjct: 64 LGIRVEKINFHKYTGMLRFTG 84
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTML 66
+ +K K G + + E +D+WH Y++I+EGD V A T+RK S++ V L
Sbjct: 4 LEEKPKEGKIKIKAETLDDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVFL 63
Query: 67 TISVESIDFDTQACVLRLKG 86
I E I+ A LR+ G
Sbjct: 64 GIKAEKINLHRFANQLRITG 83
>sp|A4WLJ8|PELO_PYRAR Protein pelota homolog OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=pelA PE=3 SV=1
Length = 333
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 16 VVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDF 75
+V + PE ED++ Y LI GD VR T+R+ + + G+ RV+ L I VE++++
Sbjct: 11 IVRVTPERDEDLYFLYLLIDVGDVVRGWTVREYKPD---GTKEGERVKMFLGIKVEALEY 67
Query: 76 DTQACVLRLKG 86
LR++G
Sbjct: 68 HKFRGSLRVRG 78
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS 60
M+++H++ K G V + E +D+WH Y++I EGD V A T+RK S++ +
Sbjct: 1 MQIIHED----PKEGKVKVKAETLDDLWHLYHIIDEGDVVYAKTLRKQSQRSDSLRAEKV 56
Query: 61 RV-RTMLTISVESIDFDTQACVLRLKG 86
V L + E I+F A +R+ G
Sbjct: 57 EVIPVFLGVRAEKINFHKFANQVRVTG 83
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV-RTML 66
+ +K K G+V + E +D+WH Y++I GD V A T+RK S++ + V L
Sbjct: 4 LEEKPKEGIVKVKAETLDDLWHLYHVIDPGDVVYAKTLRKQAQRSDSLRAEKVEVIPVYL 63
Query: 67 TISVESIDFDTQACVLRLKG 86
+ E I+F A +R+ G
Sbjct: 64 GVKAEKINFHKFANQVRVTG 83
>sp|Q8ZTE8|PELO_PYRAE Protein pelota homolog OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=pelA PE=3 SV=1
Length = 332
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 13 KSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K V+ +VPE ED++ Y LI +GD +R T+R+ + + G R++ L I E+
Sbjct: 8 KRLVIRVVPEREEDLYFIYLLIDKGDIIRGWTVREYKPD---GVKEGERIKMYLAIKAEA 64
Query: 73 IDFDTQACVLRLKG 86
+++ LR++G
Sbjct: 65 LEYHKFRGSLRVRG 78
>sp|B8GIR5|PELO_METPE Protein pelota homolog OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=pelA PE=3 SV=1
Length = 340
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 15 GVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESI 73
G + L PE +D+WH +LI GD V A T R V++ ++ + R + + I VE +
Sbjct: 13 GEIRLFPESVDDIWHLSHLIAPGDLVFAQTFRSVETATDKLRPEKAEKRPVRIGIRVEKV 72
Query: 74 DFDTQACVLRLKG 86
+F + LR+ G
Sbjct: 73 EFHQYSSRLRVTG 85
>sp|Q97BJ3|PELO_THEVO Protein pelota homolog OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=pelA PE=3 SV=1
Length = 340
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 10 DKD-KSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTG-SSTSSRVRTMLT 67
DKD K G L E +D+W+ N+I GD + A T R+++ S+ S R+ +T
Sbjct: 5 DKDEKLGRYTLRIENLDDLWYLKNIIAPGDKISAVTFRRIEESSDMQRSREKERIPIRVT 64
Query: 68 ISVESIDFDTQACVLRLKGNCGN 90
I VE I+F LR+ G N
Sbjct: 65 IEVEKIEFQDFENRLRILGKVTN 87
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM
16790) GN=pelA PE=3 SV=1
Length = 355
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 19 LVPEESEDMWHAYNLITEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESIDFDT 77
LVPE +D+WH +++ GD V T R++Q ++ N + R ++TI V ++F
Sbjct: 18 LVPENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDENLRDTGGQREHLVVTIEVADVEFAR 77
Query: 78 QACVLRLKGNCGNC 91
A LR+ G +C
Sbjct: 78 FANRLRVGGEIISC 91
>sp|A8A935|PELO_IGNH4 Protein pelota homolog OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=pelA PE=3 SV=1
Length = 346
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 12 DKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVE 71
+ G V + E+ ED+W ++ + GD VRA T R V GSS ++ LTI V
Sbjct: 8 ESKGEVKVRVEDEEDVWILHSALRPGDLVRARTARSV-----AGSSGKEKIPMTLTIKVT 62
Query: 72 SIDFDTQACVLRLKG 86
+F + VLR+KG
Sbjct: 63 GSEFQAFSNVLRVKG 77
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=pelA PE=3 SV=1
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTS 59
M++ ++++ K + G +A+ E +D+WH +I +GD V A T RK S S+
Sbjct: 1 MRVTNRSL--KGREGEIAVTAETLDDLWHLKYIIEKGDMVFALTRRKADSASDKLRPEKV 58
Query: 60 SRVRTMLTISVESIDFDTQACVLRLKG 86
+V+ L I VE ++F A LR+ G
Sbjct: 59 EKVKVRLGIRVEELEFHKFANRLRIHG 85
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRK-VQSESNTGSSTSSRVRTML 66
+ +K K G V + E +D+WH Y++I GD V A T+RK Q + + + L
Sbjct: 4 LEEKPKEGKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPVFL 63
Query: 67 TISVESIDFDTQACVLRLKG 86
+ E I+F A +R+ G
Sbjct: 64 GVQAEKINFHKFANQVRVTG 83
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
K + G + L PE +D+WH +L+ GD V A+T R V++ ++ R + L I
Sbjct: 9 KRQFGEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSVEAATDKLRPEKVEKRPVRLGIW 68
Query: 70 VESIDFDTQACVLRLKG 86
VE ++F LR+ G
Sbjct: 69 VEKVEFHQHTNRLRIAG 85
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRK-VQSESNTGSSTSSRVRTML 66
+ +K K G V L E +D+WH Y++I+ GD V A T+RK Q + + L
Sbjct: 4 LEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFL 63
Query: 67 TISVESIDFDTQACVLRLKG 86
+ E I+ A LR+ G
Sbjct: 64 GVRAEKINLHRFANQLRVTG 83
>sp|A2SQV7|PELO_METLZ Protein pelota homolog OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=pelA PE=3 SV=1
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
KD G L+PE +D+WH +LI+ G++V A T+R V S+ S R + + +
Sbjct: 11 KDGFGEYKLMPESIDDLWHLSHLISPGNTVYAVTLRTVDGPSDKLRSEKLEKRPVRIGVK 70
Query: 70 VESIDFDTQACVLRLKG 86
E +F ++ LR+ G
Sbjct: 71 CEKAEFVPESSRLRVFG 87
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 6 KNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRT 64
K I + + ++ ++PE +D+WH N+I + ++V A T R+ + + + + ++ R
Sbjct: 2 KIIKEIPEKNIIKVMPENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGTKRRV 61
Query: 65 MLTISVESIDFDTQACVLRLKG 86
L + E I FD LR+ G
Sbjct: 62 YLGVKAEKIKFDENTNRLRVSG 83
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTS 59
M++ ++++ + + G +A+ E +D+WH +I +GD V A T RK S S+
Sbjct: 1 MRVTNRSL--RGREGEIAITAETLDDLWHLKYIIEKGDLVFALTKRKADSASDKLRPEKV 58
Query: 60 SRVRTMLTISVESIDFDTQACVLRLKG 86
+V+ L I VE ++F A LR+ G
Sbjct: 59 EKVKVRLGIRVEEMEFHKFANRLRIHG 85
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3
SV=1
Length = 355
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 VALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSST-SSRVRTMLTISVESIDF 75
+ LVPE +D+WH +++ GD V T R++Q + T R +T+ V+ ++F
Sbjct: 16 LTLVPENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQMRDTGGQREHLFVTLQVDEVEF 75
Query: 76 DTQACVLRLKGNCGNC 91
A LR+ G C
Sbjct: 76 ARFANRLRVSGVIVGC 91
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160
/ ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 17 VALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + + T M + I V +++F
Sbjct: 16 ITLVPETLDDLWHLTYVLEPGDLVAGDTTRRIQRDDDKMRDTGGEREPMWIRIDVNNVEF 75
Query: 76 DTQACVLRLKGNCGNC 91
A LR+ G+ +C
Sbjct: 76 AKFANRLRVGGDIVDC 91
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 15 GVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESI 73
G ++L PE +D+WH ++ GD+V A T R V S S+ + + L I VES
Sbjct: 13 GEISLQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVEST 72
Query: 74 DFDTQACVLRLKG 86
+F + LR+KG
Sbjct: 73 EFHKFSNRLRIKG 85
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTS 59
M++ ++++ K + G +A+ E +D+WH +I +GD V + T RK S S+
Sbjct: 1 MRVTNRSL--KGREGEIAVTAETLDDLWHLKYIIEKGDLVFSVTKRKADSASDKIRPEKV 58
Query: 60 SRVRTMLTISVESIDFDTQACVLRLKG 86
+V+ L I V+ ++F A LRL G
Sbjct: 59 EKVKVRLGIRVDDLEFHKFANRLRLHG 85
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 17 VALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSST-SSRVRTMLTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + T R +TI V ++F
Sbjct: 16 ITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEF 75
Query: 76 DTQACVLRLKGNCGNC 91
+ LR+ G +C
Sbjct: 76 HKFSNRLRVSGTIEDC 91
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 17 VALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSST-SSRVRTMLTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + T R +TI V ++F
Sbjct: 16 ITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEF 75
Query: 76 DTQACVLRLKGNCGNC 91
+ LR+ G +C
Sbjct: 76 HKFSNRLRVSGTIEDC 91
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 6 KNINDKDKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRT 64
K I + + ++ L+PE +D+WH N+I +++ A T R+ + + + + ++ R
Sbjct: 2 KIIQEIPEKNIIKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRV 61
Query: 65 MLTISVESIDFDTQACVLRLKG 86
L I E I+F LR+ G
Sbjct: 62 FLGIKAEKINFHEDFNRLRVSG 83
>sp|Q9YAZ5|PELO_AERPE Protein pelota homolog OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pelA PE=1
SV=2
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 12 DKSGVVALVPEESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVE 71
+K +V L PE ED+W + GD VR T R V GS RV L I ++
Sbjct: 8 NKRRIVRLRPESEEDLWLLRITLRPGDVVRIRTSRDVP----VGSGRKERVVMTLRIRLD 63
Query: 72 SIDFDTQACVLRLKG 86
SI+F LR+ G
Sbjct: 64 SIEFQPFTGKLRISG 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,481,849
Number of Sequences: 539616
Number of extensions: 850634
Number of successful extensions: 1952
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1874
Number of HSP's gapped (non-prelim): 74
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)