BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14164
(361 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XQS|A Chain A, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|B Chain B, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 280
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 134/240 (55%), Gaps = 4/240 (1%)
Query: 119 GALDNLSDYICSIDYANDFLKMGGLPVL-QPLLEGSDPELRWRAAETVADIVQNNPFSQN 177
GAL+ L+D ++D A DF ++ G+ +L LE LRWRAA+ + QN Q
Sbjct: 43 GALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQE 102
Query: 178 FIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS 237
++ L LL ++ D+ TV+VK+L+A+SCLVRE E L +F++ DGFSVL+R +Q
Sbjct: 103 QVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ 162
Query: 238 KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALAS 297
+ +KL +KS FL+ L + + K L SMGMV+Q+ L+ E + +EH+L AL S
Sbjct: 163 QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE---HSPFHEHVLGALCS 219
Query: 298 LIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEEDSPEEFD 357
L+ D P+ CR L L+ L + +E Y +ELE+ +L F + + D
Sbjct: 220 LVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCFSSPADDSMD 279
>pdb|1XQR|A Chain A, Crystal Structure Of The Hspbp1 Core Domain
pdb|1XQR|B Chain B, Crystal Structure Of The Hspbp1 Core Domain
Length = 296
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 131/244 (53%), Gaps = 7/244 (2%)
Query: 119 GALDNLSDYICSIDYANDFLKMGGLPVL-QPLLEGSDPELRWRAAETVADIVQNNPFSQN 177
GAL+ L+D + D A DF ++ G +L LE LRWRAA+ + QN Q
Sbjct: 59 GALELLADLCENXDNAADFCQLSGXHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQE 118
Query: 178 FIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS 237
++ L LL ++ D+ TV+VK+L+A+SCLVRE E L +F++ DGFSVL R Q
Sbjct: 119 QVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLXRAXQQ 178
Query: 238 KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALAS 297
+ +KL +KS FL+ L + + K L S G V+Q+ L+ E + +EH+L AL S
Sbjct: 179 QVQKLKVKSAFLLQNLLVGHPEHKGTLCSXGXVQQLVALVRTE---HSPFHEHVLGALCS 235
Query: 298 LIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEEDSPEEFD 357
L+ D P+ CR L L+ L + +E Y +ELE+ +L F SP + D
Sbjct: 236 LVTDFPQGVRECREPELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCF--SSPAD-D 292
Query: 358 HQDR 361
DR
Sbjct: 293 SXDR 296
>pdb|1K9D|A Chain A, The 1.7 A Crystal Structure Of Alpha-D-Glucuronidase, A
Family-67 Glycoside Hydrolase From Bacillus
Stearothermophilus T-1
pdb|1L8N|A Chain A, The 1.5a Crystal Structure Of Alpha-d-glucuronidase From
Bacillus Stearothermophilus T-1, Complexed With
4-o-methyl-glucuronic Acid And Xylotriose
pdb|1MQQ|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase From
Bacillus Stearothermophilus T-1 Complexed With
Glucuronic Acid
Length = 679
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 128 ICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTD 183
SI+YA+ +++GGLP PL DPE+RW ET I Q P F+++ D
Sbjct: 233 FLSINYASP-IEIGGLPTADPL----DPEVRWWWKETAKRIYQYIPDFGGFVVKAD 283
>pdb|1MQP|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase From
Bacillus Stearothermophilus T-6
Length = 679
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 128 ICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTD 183
SI+YA+ +++GGLP PL DPE+R ET I Q P F+++ D
Sbjct: 233 FLSINYASP-IEIGGLPTADPL----DPEVRRWWKETAKRIYQYIPDFGGFVVKAD 283
>pdb|1K9E|A Chain A, Crystal Structure Of A Mutated Family-67
Alpha-D-Glucuronidase (E285n) From Bacillus
Stearothermophilus T-6, Complexed With 4-O-Methyl-
Glucuronic Acid
pdb|1K9F|A Chain A, Crystal Structure Of A Mutated Family-67
Alpha-D-Glucuronidase (E285n) From Bacillus
Stearothermophilus T-6, Complexed With Aldotetraouronic
Acid
Length = 679
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 128 ICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTD 183
SI+YA+ +++GGLP PL DPE+R ET I Q P F+++ D
Sbjct: 233 FLSINYASP-IEIGGLPTADPL----DPEVRRWWKETAKRIYQYIPDFGGFVVKAD 283
>pdb|1MQR|A Chain A, The Crystal Structure Of Alpha-D-Glucuronidase (E386q)
From Bacillus Stearothermophilus T-6
Length = 679
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 128 ICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTD 183
SI+YA+ +++GGLP PL DPE+R ET I Q P F+++ D
Sbjct: 233 FLSINYASP-IEIGGLPTADPL----DPEVRRWWKETAKRIYQYIPDFGGFVVKAD 283
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 22/92 (23%)
Query: 258 NQVKQV-------LLSMGMVEQMCVLIDIEDALDTEMNE---------HLLSALASLIK- 300
QVKQV LL G E + IDI D L ++N+ LL A +
Sbjct: 132 GQVKQVKALGIMALLDEGETEWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRI 191
Query: 301 -----DSPEAQSLCRLEPLNLKFKLNFIKEKH 327
PE Q E N K+ L+ IKE H
Sbjct: 192 YKIPDGKPENQFAFSGEAKNKKYALDIIKETH 223
>pdb|3BAN|A Chain A, The Crystal Structure Of Mannonate Dehydratase From
Streptococcus Suis Serotype2
pdb|3BAN|B Chain B, The Crystal Structure Of Mannonate Dehydratase From
Streptococcus Suis Serotype2
pdb|3BDK|A Chain A, Crystal Structure Of Streptococcus Suis Mannonate
Dehydratase Complexed With Substrate Analogue
pdb|3BDK|B Chain B, Crystal Structure Of Streptococcus Suis Mannonate
Dehydratase Complexed With Substrate Analogue
pdb|3DBN|A Chain A, Crystal Structure Of The Streptoccocus Suis Serotype2 D-
Mannonate Dehydratase In Complex With Its Substrate
pdb|3DBN|B Chain B, Crystal Structure Of The Streptoccocus Suis Serotype2 D-
Mannonate Dehydratase In Complex With Its Substrate
pdb|3FVM|A Chain A, Crystal Structure Of Steptococcus Suis Mannonate
Dehydratase With Metal Mn++
pdb|3FVM|B Chain B, Crystal Structure Of Steptococcus Suis Mannonate
Dehydratase With Metal Mn++
Length = 386
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%)
Query: 13 RKQPIRLEDSQAQPNLAIEYAPNQDIPARQPRQPSNLQDLLRYAVEAGSRSRAQEAPNIN 72
+K P+ LE+ +A P + D+P Q N+ +L + EAG E+ ++
Sbjct: 30 KKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVH 89
Query: 73 RAASMNEANRGFLLDALNSMMVNVGA 98
+ NR L++ + + NVGA
Sbjct: 90 EDIKQGKPNRDALIENYKTSIRNVGA 115
>pdb|3DA5|A Chain A, Crystal Structure Of PiwiARGONAUTEZWILLE(PAZ) DOMAIN FROM
Thermococcus Thioreducens
pdb|3DA5|B Chain B, Crystal Structure Of PiwiARGONAUTEZWILLE(PAZ) DOMAIN FROM
Thermococcus Thioreducens
Length = 128
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 201 QVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCF 248
Q++S + LV N++ L++F+K ++LLR I S + K+V K F
Sbjct: 4 QIRSKKTLWELVGRNKDALRDFLKEHRGTILLRDIAS-EHKVVYKPIF 50
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 298 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 357
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 358 VVKLLH---PPSHWPLIKATVGLIRN 380
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 285 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 344
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 345 VVKLLH---PPSHWPLIKATVGLIRN 367
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 289 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 348
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 349 VVKLLH---PPSHWPLIKATVGLIRN 371
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 302 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 361
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 362 VVKLLH---PPSHWPLIKATVGLIRN 384
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 301 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 360
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 361 VVKLLH---PPSHWPLIKATVGLIRN 383
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 285 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 344
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 345 VVKLLH---PPSHWPLIKATVGLIRN 367
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 287 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 346
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 347 VVKLLH---PPSHWPLIKATVGLIRN 369
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 300 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 359
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 360 VVKLLH---PPSHWPLIKATVGLIRN 382
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 302 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 361
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 362 VVKLLH---PPSHWPLIKATVGLIRN 384
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 303 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 362
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 363 VVKLLH---PPSHWPLIKATVGLIRN 385
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 304 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 363
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 364 VVKLLH---PPSHWPLIKATVGLIRN 386
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 298 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 357
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 358 VVKLLH---PPSHWPLIKATVGLIRN 380
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 297 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 356
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 357 VVKLLH---PPSHWPLIKATVGLIRN 379
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 90 NSMMVNVGAELEKIIKTLKENQDQKDI---CIGALDNLSDYICSIDYANDFLKMG-GLPV 145
N MMV +E +++T+ D++DI I AL +L+ + A + +++ GLPV
Sbjct: 433 NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPV 492
Query: 146 LQPLLEGSDPELRWRAAETVADIVQN 171
+ LL P W + +++N
Sbjct: 493 VVKLLH---PPSHWPLIKATVGLIRN 515
>pdb|2H3G|X Chain X, Structure Of The Type Iii Pantothenate Kinase (Coax) From
Bacillus Anthracis
Length = 268
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 63 SRAQEAPNINRAASMNEANRGFLLDALNSMMVNVGAELEKIIKTLKE--NQDQKDICIGA 120
SRA + P I + + + + ++ ++E I+K +KE Q+ K I G
Sbjct: 163 SRAAKLPRIEITKPSSVVGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGG 222
Query: 121 LDNL-SDYICSIDYANDFLKMGGLPVL 146
L L S+ ID + FL + GL +L
Sbjct: 223 LAKLISEESNVIDVVDPFLTLKGLYML 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,997,305
Number of Sequences: 62578
Number of extensions: 392290
Number of successful extensions: 1005
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 998
Number of HSP's gapped (non-prelim): 29
length of query: 361
length of database: 14,973,337
effective HSP length: 100
effective length of query: 261
effective length of database: 8,715,537
effective search space: 2274755157
effective search space used: 2274755157
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)