Query psy14164
Match_columns 361
No_of_seqs 283 out of 1287
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:05:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xqr_A HSPBP1 protein; armadil 100.0 1.3E-50 4.5E-55 386.2 26.3 273 82-358 13-296 (296)
2 3tpo_A Importin subunit alpha- 100.0 6.2E-27 2.1E-31 238.7 29.2 244 97-354 246-502 (529)
3 3ul1_B Importin subunit alpha- 100.0 1.4E-26 4.7E-31 235.4 28.0 245 97-355 227-484 (510)
4 4b8j_A Importin subunit alpha- 99.9 9.5E-24 3.3E-28 213.9 30.4 241 112-356 256-503 (528)
5 4hxt_A De novo protein OR329; 99.9 2.7E-23 9.1E-28 188.7 28.7 244 100-356 4-248 (252)
6 4db6_A Armadillo repeat protei 99.9 1E-23 3.5E-28 187.8 24.5 185 112-300 24-209 (210)
7 2jdq_A Importin alpha-1 subuni 99.9 1.8E-22 6E-27 198.8 30.0 238 113-355 205-449 (450)
8 4db8_A Armadillo-repeat protei 99.9 1.4E-22 4.7E-27 185.2 26.7 234 102-348 16-250 (252)
9 4db6_A Armadillo repeat protei 99.9 8.7E-22 3E-26 175.2 25.5 200 138-348 9-208 (210)
10 4hxt_A De novo protein OR329; 99.9 1.1E-21 3.6E-26 178.1 26.5 198 100-303 46-244 (252)
11 1wa5_B Importin alpha subunit; 99.9 1.2E-21 4E-26 199.0 29.4 236 113-354 270-515 (530)
12 4db8_A Armadillo-repeat protei 99.9 4.7E-22 1.6E-26 181.7 22.9 195 100-300 56-251 (252)
13 3nmw_A APC variant protein; AR 99.9 7E-22 2.4E-26 192.4 23.7 193 112-307 139-341 (354)
14 3nmw_A APC variant protein; AR 99.9 2.9E-21 1E-25 188.0 26.4 227 114-350 98-335 (354)
15 3nmz_A APC variant protein; pr 99.9 1.1E-21 3.6E-26 197.0 22.4 192 112-306 255-456 (458)
16 3nmz_A APC variant protein; pr 99.9 3.3E-20 1.1E-24 186.2 26.1 227 114-350 214-451 (458)
17 1xm9_A Plakophilin 1; armadill 99.9 4E-20 1.4E-24 185.5 23.9 241 101-352 89-452 (457)
18 3tt9_A Plakophilin-2; cell adh 99.9 1.9E-20 6.6E-25 171.9 19.7 198 101-300 11-229 (233)
19 3tpo_A Importin subunit alpha- 99.8 1.7E-19 5.7E-24 183.8 25.8 200 102-305 123-327 (529)
20 3ul1_B Importin subunit alpha- 99.8 1.5E-19 5.2E-24 183.4 25.2 192 111-305 112-308 (510)
21 1xm9_A Plakophilin 1; armadill 99.8 3.8E-20 1.3E-24 185.6 20.4 195 100-299 4-219 (457)
22 4b8j_A Importin subunit alpha- 99.8 8.8E-19 3E-23 177.3 27.5 203 100-307 119-322 (528)
23 3now_A UNC-45 protein, SD10334 99.8 1.3E-19 4.4E-24 192.3 21.5 188 113-302 594-784 (810)
24 3now_A UNC-45 protein, SD10334 99.8 3.5E-19 1.2E-23 189.0 22.9 226 113-349 549-782 (810)
25 2jdq_A Importin alpha-1 subuni 99.8 3.4E-18 1.2E-22 168.1 27.2 203 100-307 66-270 (450)
26 1wa5_B Importin alpha subunit; 99.8 3.8E-18 1.3E-22 173.0 27.0 191 113-307 144-335 (530)
27 3tt9_A Plakophilin-2; cell adh 99.8 1.9E-18 6.5E-23 158.6 22.1 202 142-347 9-227 (233)
28 3l6x_A Catenin delta-1; cateni 99.8 2.2E-18 7.4E-23 177.3 22.8 198 100-301 50-271 (584)
29 1xqr_A HSPBP1 protein; armadil 99.8 3.7E-18 1.3E-22 162.2 19.8 152 112-264 94-247 (296)
30 1jdh_A Beta-catenin; beta-cate 99.8 1.3E-17 4.3E-22 167.6 23.1 223 112-347 278-528 (529)
31 3l6x_A Catenin delta-1; cateni 99.8 6.5E-17 2.2E-21 166.3 23.2 162 140-304 47-225 (584)
32 2z6h_A Catenin beta-1, beta-ca 99.7 2.5E-16 8.7E-21 163.7 26.0 185 112-301 275-487 (644)
33 1jdh_A Beta-catenin; beta-cate 99.7 6E-16 2E-20 155.3 26.4 197 99-301 60-257 (529)
34 2z6h_A Catenin beta-1, beta-ca 99.7 1.5E-15 5.2E-20 157.9 26.3 197 99-301 57-254 (644)
35 2z6g_A B-catenin; FULL-length, 99.7 1.7E-15 5.8E-20 161.3 23.9 185 112-301 411-623 (780)
36 2z6g_A B-catenin; FULL-length, 99.7 8.8E-15 3E-19 155.9 24.3 185 113-302 206-391 (780)
37 3opb_A SWI5-dependent HO expre 99.6 3.3E-15 1.1E-19 156.6 18.2 277 48-349 417-728 (778)
38 3opb_A SWI5-dependent HO expre 99.5 3.5E-14 1.2E-18 148.9 14.6 219 78-301 470-729 (778)
39 3grl_A General vesicular trans 99.4 1.3E-11 4.5E-16 126.6 23.3 221 79-301 37-293 (651)
40 3grl_A General vesicular trans 99.2 6.9E-10 2.3E-14 114.0 21.7 208 95-307 18-248 (651)
41 4gmo_A Putative uncharacterize 99.2 9.7E-11 3.3E-15 123.0 14.4 165 142-308 35-222 (684)
42 4gmo_A Putative uncharacterize 99.0 3.2E-09 1.1E-13 111.4 17.1 191 103-299 39-257 (684)
43 3ltj_A Alpharep-4; protein eng 99.0 3.5E-08 1.2E-12 86.5 19.0 151 99-298 15-165 (201)
44 3ltm_A Alpha-REP4; protein eng 99.0 4.2E-08 1.4E-12 86.7 18.6 184 100-350 21-204 (211)
45 3ltm_A Alpha-REP4; protein eng 99.0 2.3E-08 8E-13 88.3 16.8 154 101-303 53-206 (211)
46 3ltj_A Alpharep-4; protein eng 98.9 3.2E-08 1.1E-12 86.8 16.5 150 101-299 48-197 (201)
47 1oyz_A Hypothetical protein YI 98.9 3.8E-08 1.3E-12 90.8 17.0 121 150-299 100-220 (280)
48 1oyz_A Hypothetical protein YI 98.9 3E-07 1E-11 84.8 21.1 121 142-299 129-249 (280)
49 4fdd_A Transportin-1; heat rep 98.7 4.3E-08 1.5E-12 104.6 9.5 174 117-300 338-512 (852)
50 2vgl_B AP-2 complex subunit be 98.7 3.3E-07 1.1E-11 94.3 15.5 213 79-306 63-317 (591)
51 4fdd_A Transportin-1; heat rep 98.6 1.4E-07 4.9E-12 100.5 12.8 181 112-303 268-474 (852)
52 1te4_A Conserved protein MTH18 98.6 3.2E-09 1.1E-13 87.6 -1.2 120 140-297 11-130 (131)
53 2vgl_B AP-2 complex subunit be 98.6 1.3E-06 4.5E-11 89.8 17.5 167 113-303 26-192 (591)
54 1b3u_A Protein (protein phosph 98.6 9.7E-07 3.3E-11 88.8 16.2 175 112-298 176-351 (588)
55 1w63_A Adapter-related protein 98.6 2.6E-06 8.9E-11 88.1 19.6 177 114-307 121-349 (618)
56 1w63_A Adapter-related protein 98.6 7.3E-06 2.5E-10 84.7 22.9 149 142-305 108-268 (618)
57 3dad_A FH1/FH2 domain-containi 98.6 8E-06 2.7E-10 77.7 21.1 193 94-290 114-326 (339)
58 2qk2_A LP04448P; mini spindles 98.5 1.4E-06 4.7E-11 78.9 14.7 174 112-302 27-207 (242)
59 2qk1_A Protein STU2; STU2P, XM 98.5 1.4E-06 4.9E-11 80.0 12.7 181 112-300 28-220 (249)
60 1b3u_A Protein (protein phosph 98.4 1.4E-05 4.7E-10 80.4 19.6 186 100-301 47-233 (588)
61 2bpt_A Importin beta-1 subunit 98.4 7.6E-06 2.6E-10 86.3 18.5 180 115-304 346-533 (861)
62 1ibr_B P95, importin beta-1 su 98.3 2.4E-05 8.3E-10 76.1 18.7 156 142-301 129-289 (462)
63 3b2a_A TON_1937, putative unch 98.3 1.9E-05 6.5E-10 71.4 16.0 173 112-302 45-220 (265)
64 1te4_A Conserved protein MTH18 98.3 6.5E-07 2.2E-11 73.5 5.8 88 142-252 43-130 (131)
65 1ibr_B P95, importin beta-1 su 98.3 8.9E-06 3E-10 79.2 14.7 182 113-303 230-440 (462)
66 2qk2_A LP04448P; mini spindles 98.3 6.7E-06 2.3E-10 74.3 12.7 147 144-302 18-164 (242)
67 1qgr_A Protein (importin beta 98.3 2.6E-06 9E-11 90.0 11.1 180 115-303 343-540 (876)
68 3qml_C Protein SLS1, nucleotid 98.2 2.9E-05 1E-09 72.7 15.9 241 101-352 25-304 (315)
69 2vgl_A Adaptor protein complex 98.2 6.4E-05 2.2E-09 77.8 20.2 170 112-305 50-221 (621)
70 1qgr_A Protein (importin beta 98.2 0.00029 9.8E-09 74.3 23.7 200 100-304 174-441 (876)
71 3b2a_A TON_1937, putative unch 98.1 0.00017 5.8E-09 65.2 17.6 187 142-351 34-220 (265)
72 1u6g_C TIP120 protein, CAND1; 98.1 5.2E-05 1.8E-09 83.9 17.3 185 143-349 933-1132(1230)
73 2bpt_A Importin beta-1 subunit 98.1 1.7E-05 5.7E-10 83.6 11.4 198 99-303 499-714 (861)
74 2db0_A 253AA long hypothetical 98.0 0.001 3.5E-08 58.1 19.6 166 116-304 48-214 (253)
75 3dad_A FH1/FH2 domain-containi 97.9 0.0008 2.7E-08 64.0 19.2 156 146-303 123-289 (339)
76 1u6g_C TIP120 protein, CAND1; 97.9 0.00016 5.5E-09 80.0 16.8 189 101-303 9-207 (1230)
77 3tjz_B Coatomer subunit gamma; 97.8 0.00098 3.3E-08 64.3 18.0 139 143-303 70-208 (355)
78 2qk1_A Protein STU2; STU2P, XM 97.8 7E-05 2.4E-09 68.6 9.3 152 146-303 21-178 (249)
79 2vgl_A Adaptor protein complex 97.8 0.00068 2.3E-08 70.1 17.2 130 78-217 87-220 (621)
80 2of3_A ZYG-9; multifunctional 97.6 0.016 5.3E-07 53.6 21.7 190 113-324 59-261 (266)
81 4ffb_C Protein STU2; tubulin f 97.3 0.0043 1.5E-07 57.0 14.0 177 114-301 23-213 (278)
82 4ady_A RPN2, 26S proteasome re 97.2 0.016 5.5E-07 62.3 19.6 135 142-304 542-680 (963)
83 3tjz_B Coatomer subunit gamma; 97.2 0.0011 3.8E-08 63.8 9.7 155 143-311 141-327 (355)
84 4ady_A RPN2, 26S proteasome re 97.2 0.016 5.4E-07 62.4 19.3 100 143-258 579-679 (963)
85 2db0_A 253AA long hypothetical 97.2 0.056 1.9E-06 47.3 19.2 200 81-300 30-246 (253)
86 3eg5_B Protein diaphanous homo 96.9 0.069 2.4E-06 51.8 19.1 158 118-279 85-275 (383)
87 1upk_A MO25 protein; transfera 96.9 0.26 8.7E-06 46.8 21.8 172 172-347 153-333 (341)
88 3c2g_A SYS-1 protein; beta-cat 96.8 0.023 7.9E-07 54.3 14.1 184 115-300 258-473 (619)
89 1ho8_A Vacuolar ATP synthase s 96.8 0.52 1.8E-05 46.8 24.9 195 101-302 80-303 (480)
90 3u0r_A Apoptosis inhibitor 5; 96.8 0.057 1.9E-06 53.6 17.0 125 153-301 40-164 (507)
91 2f31_A Diaphanous protein homo 96.7 0.026 8.8E-07 50.9 13.6 145 129-276 32-207 (233)
92 4hat_C Exportin-1; heat repeat 96.7 0.006 2E-07 66.7 10.3 143 153-303 465-621 (1023)
93 2bnx_A Diaphanous protein homo 96.6 0.24 8.2E-06 48.0 20.6 149 129-280 36-215 (386)
94 1wa5_C Importin alpha RE-expor 96.6 0.038 1.3E-06 59.6 15.8 144 152-300 416-582 (960)
95 3ebb_A Phospholipase A2-activa 96.5 0.31 1.1E-05 45.6 19.6 229 46-291 54-297 (304)
96 2x19_B Importin-13; nuclear tr 96.2 0.042 1.4E-06 58.8 13.6 141 151-303 459-602 (963)
97 2x1g_F Cadmus; transport prote 96.1 0.045 1.6E-06 58.8 13.5 138 153-302 476-617 (971)
98 2fv2_A RCD1 required for cell 96.0 0.16 5.6E-06 46.3 14.4 195 99-302 4-226 (268)
99 1ho8_A Vacuolar ATP synthase s 95.8 0.12 3.9E-06 51.5 13.3 140 116-255 288-476 (480)
100 2iw3_A Elongation factor 3A; a 95.7 0.76 2.6E-05 49.8 20.3 170 113-300 147-324 (986)
101 1lsh_A Lipovitellin (LV-1N, LV 95.6 0.99 3.4E-05 49.4 21.4 158 143-329 393-576 (1056)
102 3m1i_C Exportin-1; heat repeat 95.5 0.069 2.4E-06 58.1 11.7 143 153-303 465-621 (1049)
103 2x1g_F Cadmus; transport prote 95.5 0.17 5.9E-06 54.2 14.5 131 115-256 479-616 (971)
104 2x19_B Importin-13; nuclear tr 95.3 0.45 1.5E-05 50.8 17.1 177 113-300 462-649 (963)
105 4ffb_C Protein STU2; tubulin f 95.2 1.2 4.1E-05 40.3 17.6 146 146-301 14-169 (278)
106 2fv2_A RCD1 required for cell 95.1 0.71 2.4E-05 42.1 15.2 167 96-265 46-233 (268)
107 2iw3_A Elongation factor 3A; a 95.1 4.7 0.00016 43.7 24.0 133 118-255 70-204 (986)
108 4hat_C Exportin-1; heat repeat 95.0 0.83 2.8E-05 49.8 18.2 168 83-258 431-621 (1023)
109 1wa5_C Importin alpha RE-expor 95.0 0.97 3.3E-05 48.5 18.6 191 103-301 460-671 (960)
110 3gs3_A Symplekin, LD45768P; he 94.9 1.4 4.7E-05 40.2 16.8 130 113-254 28-172 (257)
111 3ibv_A Exportin-T; karyopherin 94.9 0.93 3.2E-05 49.1 18.0 110 96-214 4-120 (980)
112 3ebb_A Phospholipase A2-activa 94.4 1.8 6.3E-05 40.4 16.6 160 143-310 105-273 (304)
113 1juq_A ADP-ribosylation factor 94.3 0.17 5.7E-06 43.5 8.4 71 143-213 52-128 (171)
114 1x5b_A Signal transducing adap 94.2 0.27 9.4E-06 41.7 9.7 70 143-212 54-124 (163)
115 1mhq_A ADP-ribosylation factor 93.7 0.52 1.8E-05 39.3 10.2 72 142-213 39-116 (148)
116 3l9t_A Putative uncharacterize 93.6 2.3 8E-05 38.2 14.9 146 99-266 71-218 (240)
117 3l9t_A Putative uncharacterize 93.5 0.83 2.8E-05 41.2 11.8 141 144-308 74-215 (240)
118 3m1i_C Exportin-1; heat repeat 93.5 0.62 2.1E-05 50.6 13.2 170 82-256 430-619 (1049)
119 3zyq_A Hepatocyte growth facto 93.4 0.49 1.7E-05 42.3 10.2 71 142-212 46-117 (226)
120 2of3_A ZYG-9; multifunctional 93.4 0.42 1.4E-05 43.9 9.8 107 143-262 134-244 (266)
121 1dvp_A HRS, hepatocyte growth 93.1 0.56 1.9E-05 41.6 10.1 70 143-212 44-114 (220)
122 3o2t_A Symplekin; heat repeat, 92.8 7.2 0.00025 37.6 23.8 178 115-305 40-261 (386)
123 3pst_A Protein DOA1; protein d 92.7 2.5 8.7E-05 41.2 14.8 148 116-272 242-406 (425)
124 1lsh_A Lipovitellin (LV-1N, LV 92.7 1.7 5.9E-05 47.4 15.1 122 150-302 449-578 (1056)
125 3oc3_A Helicase MOT1, MOT1; re 92.4 0.14 4.9E-06 51.9 5.6 159 115-299 243-403 (800)
126 3g2s_A C-terminal fragment of 92.4 1.2 4.2E-05 37.1 10.6 71 143-213 50-126 (149)
127 3gae_A Protein DOA1; UFD3, CDC 92.2 0.76 2.6E-05 41.8 9.8 172 76-261 34-223 (253)
128 1elk_A Target of MYB1; superhe 92.0 1.1 3.7E-05 37.7 9.9 70 143-212 55-129 (157)
129 3qml_C Protein SLS1, nucleotid 92.0 2.4 8.1E-05 39.6 12.9 99 196-300 82-189 (315)
130 3ldz_A STAM-1, signal transduc 91.9 0.92 3.2E-05 37.4 9.2 70 142-212 43-113 (140)
131 1lrv_A LRV, leucine-rich repea 91.6 0.11 3.6E-06 47.3 3.3 21 144-164 101-121 (244)
132 3l3f_X Protein DOA1, DOA1/UFD3 91.2 2.9 0.0001 40.0 13.1 139 117-264 180-335 (362)
133 3eg5_B Protein diaphanous homo 91.1 1.3 4.5E-05 42.7 10.8 96 203-302 86-193 (383)
134 1lrv_A LRV, leucine-rich repea 91.1 0.12 4E-06 47.0 3.1 23 143-165 76-98 (244)
135 2f31_A Diaphanous protein homo 90.4 1.3 4.6E-05 39.4 9.5 96 202-301 19-126 (233)
136 3ldz_A STAM-1, signal transduc 87.7 2.1 7.2E-05 35.1 8.1 91 202-300 23-114 (140)
137 1upk_A MO25 protein; transfera 86.6 22 0.00074 33.6 20.3 174 124-299 147-331 (341)
138 3gjx_A Exportin-1; transport, 86.0 1.7 5.9E-05 47.6 8.4 102 153-257 491-597 (1073)
139 3u0r_A Apoptosis inhibitor 5; 85.6 21 0.00073 35.4 15.1 128 106-254 34-162 (507)
140 3gjx_A Exportin-1; transport, 84.8 8 0.00027 42.3 12.9 113 184-305 478-600 (1073)
141 3g2s_A C-terminal fragment of 84.1 4.1 0.00014 33.8 8.1 96 202-302 29-128 (149)
142 1juq_A ADP-ribosylation factor 83.9 3 0.0001 35.5 7.4 94 203-301 32-129 (171)
143 2bnx_A Diaphanous protein homo 83.3 6.5 0.00022 37.8 10.4 95 203-301 24-130 (386)
144 1mhq_A ADP-ribosylation factor 83.3 2.5 8.6E-05 35.1 6.5 94 203-301 20-117 (148)
145 3ibv_A Exportin-T; karyopherin 82.9 8.7 0.0003 41.5 12.2 144 148-299 200-360 (980)
146 1x5b_A Signal transducing adap 81.5 2.6 9E-05 35.5 6.0 90 204-300 35-125 (163)
147 3a6p_A Exportin-5; exportin-5, 81.1 20 0.00069 39.5 14.6 107 99-214 12-126 (1204)
148 3zyq_A Hepatocyte growth facto 81.1 4.2 0.00014 36.1 7.5 112 184-302 8-120 (226)
149 3hjl_A Flagellar motor switch 79.5 16 0.00054 34.4 11.2 51 198-248 154-220 (329)
150 3oc3_A Helicase MOT1, MOT1; re 78.8 5.5 0.00019 40.6 8.0 141 143-299 176-327 (800)
151 3rru_A TOM1L1 protein; structu 75.3 17 0.00059 30.1 9.1 73 143-215 55-132 (152)
152 3ut4_A CTHE_2751, putative unc 74.0 20 0.00069 29.1 8.9 100 227-350 32-131 (134)
153 1elk_A Target of MYB1; superhe 72.2 13 0.00046 30.8 7.8 92 204-300 36-130 (157)
154 1dvp_A HRS, hepatocyte growth 71.6 8.2 0.00028 33.9 6.6 91 204-301 25-116 (220)
155 1vdy_A Hypothetical protein (R 61.9 9.5 0.00033 31.3 4.6 77 269-352 50-133 (140)
156 1vdy_A Hypothetical protein (R 61.5 35 0.0012 27.9 8.0 95 203-301 30-131 (140)
157 3c2g_A SYS-1 protein; beta-cat 60.9 75 0.0026 30.5 11.0 125 205-336 263-388 (619)
158 2xpp_A IWS1, ECU08_0440; trans 60.1 70 0.0024 26.2 9.8 93 115-211 35-134 (145)
159 4atg_A TAF6; transcription, TF 58.8 88 0.003 26.9 11.7 126 76-211 4-160 (196)
160 1sz9_A PCF11 protein; RNA poly 54.9 60 0.0021 26.4 8.5 90 152-252 22-111 (144)
161 3a6p_A Exportin-5; exportin-5, 53.5 1.6E+02 0.0053 32.4 14.0 130 153-301 25-163 (1204)
162 3l3f_X Protein DOA1, DOA1/UFD3 53.4 1.1E+02 0.0037 29.0 11.1 140 158-307 180-333 (362)
163 3gae_A Protein DOA1; UFD3, CDC 53.0 56 0.0019 29.2 8.7 141 157-307 70-224 (253)
164 3pst_A Protein DOA1; protein d 52.5 1.7E+02 0.0058 28.3 12.5 141 158-308 243-397 (425)
165 4atg_A TAF6; transcription, TF 51.7 1E+02 0.0035 26.5 9.8 119 184-312 41-171 (196)
166 3o2t_A Symplekin; heat repeat, 49.0 1.8E+02 0.0063 27.7 13.6 107 182-299 62-182 (386)
167 3fga_B Serine/threonine-protei 47.3 2E+02 0.0068 27.6 14.1 154 144-310 216-376 (403)
168 3nfq_A Transcription factor IW 43.5 1.5E+02 0.005 25.0 9.7 95 115-213 50-151 (170)
169 3rru_A TOM1L1 protein; structu 37.7 31 0.0011 28.5 4.1 94 204-302 36-132 (152)
170 1bwx_A Parathyroid hormone; pe 33.4 27 0.00092 22.0 2.2 17 77-93 16-32 (39)
171 1vsy_5 Proteasome activator BL 33.0 29 0.001 37.5 4.0 148 97-255 796-966 (997)
172 1et1_A Parathyroid hormone; he 32.1 26 0.0009 21.4 2.0 15 78-92 17-31 (34)
173 3gs3_A Symplekin, LD45768P; he 31.8 2.8E+02 0.0094 24.7 14.4 130 156-299 30-172 (257)
174 1vsy_5 Proteasome activator BL 29.5 52 0.0018 35.6 5.2 103 143-255 135-245 (997)
175 1n4k_A Inositol 1,4,5-trisphos 29.5 3.6E+02 0.012 25.4 13.0 112 97-216 227-380 (381)
176 3jxy_A Alkylpurine DNA glycosy 26.2 3.1E+02 0.011 23.6 12.3 166 78-267 40-207 (232)
177 2npp_B PP2A, B subunit, serine 24.2 5E+02 0.017 25.2 14.6 139 162-311 268-410 (449)
178 4fu3_A Regulation of nuclear P 23.1 96 0.0033 24.4 4.5 60 144-214 10-69 (135)
179 2jak_A Serine/threonine-protei 22.9 2.7E+02 0.0092 26.6 8.3 146 143-292 176-359 (392)
180 4flb_A Regulation of nuclear P 22.5 81 0.0028 24.8 4.0 62 143-215 10-71 (132)
181 2ccq_A P97, peptide N-glycanas 21.7 1.5E+02 0.0052 22.4 5.2 47 144-190 4-67 (99)
182 3jxy_A Alkylpurine DNA glycosy 21.4 1.2E+02 0.0041 26.4 5.2 78 143-229 133-211 (232)
183 4gof_A Small glutamine-rich te 20.4 2E+02 0.0069 19.2 4.9 39 316-354 9-47 (52)
No 1
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=100.00 E-value=1.3e-50 Score=386.16 Aligned_cols=273 Identities=33% Similarity=0.493 Sum_probs=244.5
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHhcC----------CCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hh
Q psy14164 82 RGFLLDALNSMMVNVGAELEKIIKTLKEN----------QDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LL 150 (361)
Q Consensus 82 ~~~L~eal~~~~~~~~~~mk~~l~~L~~~----------~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL 150 (361)
..||.++|... +|++++||+++.+|.++ +.+.+.|+.|++.|.++++++||+++|++.||+++|+. +|
T Consensus 13 ~~~~~~~~~~~-~d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL 91 (296)
T 1xqr_A 13 LVPRGSHMRGQ-RGEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYL 91 (296)
T ss_dssp -------CCSC-HHHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTT
T ss_pred hHHHHHHHcCC-CCHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHH
Confidence 57899988753 78999999999999997 33457999999999999999999999999999999999 99
Q ss_pred cCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHH
Q psy14164 151 EGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSV 230 (361)
Q Consensus 151 ~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~ 230 (361)
.++++.||..|+|+||+++++||.+|+.+++.|++|+|+++|+++++..++++|+|||||++|++++..+.|++.||++.
T Consensus 92 ~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~ 171 (296)
T 1xqr_A 92 EAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSV 171 (296)
T ss_dssp TCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999997667899999999999999999999999999999999
Q ss_pred HHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhc
Q psy14164 231 LLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCR 310 (361)
Q Consensus 231 Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~ 310 (361)
|+.+|++++.++|++|+|+|++|+.++++.+..+++.|++++|+.+|.++ +.+++++++.+|.+|+..++..+..|+
T Consensus 172 L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~---d~~v~~~al~aL~~l~~~~~~~~~~~~ 248 (296)
T 1xqr_A 172 LMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE---HSPFHEHVLGALCSLVTDFPQGVRECR 248 (296)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSC---CSTHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCC---ChhHHHHHHHHHHHHHhCChhHHHHHh
Confidence 99999999999999999999999998899999999999999999999999 999999999999999999998899998
Q ss_pred cCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcCCCCCcccCC
Q psy14164 311 LEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEEDSPEEFDH 358 (361)
Q Consensus 311 ~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~~~~~~~~~~ 358 (361)
.+...|..+|+++++.++.|++|+++|+||.+|+++||+++++++|||
T Consensus 249 ~~~~~l~~lL~~~~~~lq~~e~~~e~~~~~~~il~~~f~~~~~~~~~~ 296 (296)
T 1xqr_A 249 EPELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCFSSPADDSMDR 296 (296)
T ss_dssp CGGGCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCC---------
T ss_pred ccHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 876678899999999999888899999999999999999999999997
No 2
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.96 E-value=6.2e-27 Score=238.72 Aligned_cols=244 Identities=14% Similarity=0.199 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHhhcCccc-HHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCH
Q psy14164 97 GAELEKIIKTLKEN--QDQKDICIGALDNLSDYICSIDY-ANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNP 173 (361)
Q Consensus 97 ~~~mk~~l~~L~~~--~~~~~~~~~Al~~L~~lve~idn-a~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~ 173 (361)
...+..++..|... +.+.+.+..|++.|.+++...++ ...++..|+++.|+.+|.+++..++..|+++|++++.+++
T Consensus 246 ~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~ 325 (529)
T 3tpo_A 246 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 325 (529)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccch
Confidence 44445555554321 24567889999999999976544 4557788999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHH
Q psy14164 174 FSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACL 253 (361)
Q Consensus 174 ~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L 253 (361)
..+..+++.|+++.|+.+|.+ ++..+++.|+|+|+||+.+++.....+++.|+++.|+.+|.+++.++|..|+|+|++|
T Consensus 326 ~~~~~i~~~g~l~~L~~LL~~-~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl 404 (529)
T 3tpo_A 326 EQTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNY 404 (529)
T ss_dssp HHHHHHHHTTGGGGHHHHTTC-SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccHHHHHHHHcC-CCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 999999999999999999997 6789999999999999999999999999999999999999999999999999999999
Q ss_pred hcC-CchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChH---------HHHhhccCcchHHHHHHHH
Q psy14164 254 CTD-NNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPE---------AQSLCRLEPLNLKFKLNFI 323 (361)
Q Consensus 254 ~~~-~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~---------~~~~~~~~~l~l~~~Le~~ 323 (361)
+.+ +++....+++.|+|++|+.+|.+. |++++..++.+|.+|++..+. .+++| .++ +.
T Consensus 405 ~~~~~~~~~~~l~~~g~i~~L~~LL~~~---d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~----ggl-----~~ 472 (529)
T 3tpo_A 405 TSGGTVEQIVYLVHCGIIEPLMNLLSAK---DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEEC----GGL-----DK 472 (529)
T ss_dssp HHHSCHHHHHHHHHTTCHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHT----TCH-----HH
T ss_pred HcCCCHHHHHHHHHCcCHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHC----CcH-----HH
Confidence 875 677889999999999999999999 999999999999999864321 12233 123 56
Q ss_pred HHhhcChhhhHHHHHHHHHHHHHhcCCCCCc
Q psy14164 324 KEKHAGNEVYHKELEYVNSVLTEVFEEDSPE 354 (361)
Q Consensus 324 ~~~l~~~~e~~~e~~~~~~il~~~f~~~~~~ 354 (361)
++.|+.| ++.++|++|..|+++||++++++
T Consensus 473 ie~Lq~~-~n~~i~~~A~~iie~yf~~~~~~ 502 (529)
T 3tpo_A 473 IEALQRH-ENESVYKASLNLIEKYFSVEEEE 502 (529)
T ss_dssp HTGGGGC-SSHHHHHHHHHHHHHHC------
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHHCCCcccc
Confidence 7788765 89999999999999999976654
No 3
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.95 E-value=1.4e-26 Score=235.36 Aligned_cols=245 Identities=14% Similarity=0.204 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHhhcCccc-HHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCH
Q psy14164 97 GAELEKIIKTLKEN--QDQKDICIGALDNLSDYICSIDY-ANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNP 173 (361)
Q Consensus 97 ~~~mk~~l~~L~~~--~~~~~~~~~Al~~L~~lve~idn-a~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~ 173 (361)
...++.++..|... +.+.+.+..|+..|.++++..++ ...+...|+++.|+.+|.+++..++..|+++|++++.+++
T Consensus 227 ~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~ 306 (510)
T 3ul1_B 227 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 306 (510)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCH
Confidence 44445555554322 34568889999999999976554 3557788999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHH
Q psy14164 174 FSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACL 253 (361)
Q Consensus 174 ~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L 253 (361)
..+..+++.|+++.|+.+|.+ ++..+++.|+|+|+||+.+++.....+++.|+++.|+.+|.+++.++|+.|+|+|++|
T Consensus 307 ~~~~~i~~~g~l~~L~~LL~~-~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl 385 (510)
T 3ul1_B 307 EQTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNY 385 (510)
T ss_dssp HHHHHHHHTTGGGGCC-CTTC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccchHHHHHHhcC-CCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999999999999999997 5789999999999999999999999999999999999999999999999999999999
Q ss_pred hcC-CchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChH---------HHHhhccCcchHHHHHHHH
Q psy14164 254 CTD-NNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPE---------AQSLCRLEPLNLKFKLNFI 323 (361)
Q Consensus 254 ~~~-~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~---------~~~~~~~~~l~l~~~Le~~ 323 (361)
+.. +++.+..+++.|++++|+.+|.+. |++++..++.+|.+|++..++ .+++| .++ +.
T Consensus 386 ~~~~~~~~~~~L~~~g~i~~L~~LL~~~---d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~----ggl-----~~ 453 (510)
T 3ul1_B 386 TSGGTVEQIVYLVHCGIIEPLMNLLSAK---DTKIIQVILDAISNIFQAAEKLGETEKLSIMIEEC----GGL-----DK 453 (510)
T ss_dssp HHHCCHHHHHHHHHTTCHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHT----THH-----HH
T ss_pred HccCCHHHHHHHHHCCCHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHc----CcH-----HH
Confidence 975 677889999999999999999999 999999999999999874421 12222 122 46
Q ss_pred HHhhcChhhhHHHHHHHHHHHHHhcCCCCCcc
Q psy14164 324 KEKHAGNEVYHKELEYVNSVLTEVFEEDSPEE 355 (361)
Q Consensus 324 ~~~l~~~~e~~~e~~~~~~il~~~f~~~~~~~ 355 (361)
++.|+.| ++.++|+++..|+++||+++++++
T Consensus 454 ie~Lq~~-~n~~i~~~A~~iie~yf~~~~~~~ 484 (510)
T 3ul1_B 454 IEALQRH-ENESVYKASLNLIEKYFSVEEEED 484 (510)
T ss_dssp HHHGGGC-SSHHHHHHHHHHHHHHCC------
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHHCCCccccc
Confidence 7788765 789999999999999999776543
No 4
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.93 E-value=9.5e-24 Score=213.87 Aligned_cols=241 Identities=16% Similarity=0.216 Sum_probs=201.5
Q ss_pred CCHHHHHHHHHHHHHhhcCcccH-HHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHH
Q psy14164 112 DQKDICIGALDNLSDYICSIDYA-NDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLT 190 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~idna-~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~ 190 (361)
.+.+.+..|+..|.+++...+.. ..+...|+++.|+.+|.++++.++..|+++|++++.+++..++.+++.|++|.|+.
T Consensus 256 ~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~ 335 (528)
T 4b8j_A 256 NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLS 335 (528)
T ss_dssp CCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHH
Confidence 34678899999999998765543 56788999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCc
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGM 269 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~ 269 (361)
+|.+..+..+++.|+|+|++++.+++.....+++.|+++.|+.+|.+++.+++..|+|+|++|+.. +++....+++.|+
T Consensus 336 lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~ 415 (528)
T 4b8j_A 336 LLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGC 415 (528)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTC
T ss_pred HHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC
Confidence 999743789999999999999999988888999999999999999999999999999999999987 6889999999999
Q ss_pred HHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHH-----HHHHhhcChhhhHHHHHHHHHHH
Q psy14164 270 VEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLN-----FIKEKHAGNEVYHKELEYVNSVL 344 (361)
Q Consensus 270 i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le-----~~~~~l~~~~e~~~e~~~~~~il 344 (361)
++.|+.+|..+ +.+++..++.+|.+|+...+.....+..+...+...++ +.+..++.| ++.++++++..|+
T Consensus 416 i~~L~~lL~~~---d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~-~~~~v~~~a~~il 491 (528)
T 4b8j_A 416 IKPLCDLLICP---DIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSH-DNNEIYEKAVKIL 491 (528)
T ss_dssp HHHHHHGGGCS---CHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGC-SSHHHHHHHHHHH
T ss_pred HHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcC-CCHHHHHHHHHHH
Confidence 99999999998 99999999999999998765433222111112233333 345566644 7889999999999
Q ss_pred HHhcCCCCCccc
Q psy14164 345 TEVFEEDSPEEF 356 (361)
Q Consensus 345 ~~~f~~~~~~~~ 356 (361)
++||+.++++++
T Consensus 492 ~~~~~~e~~~~~ 503 (528)
T 4b8j_A 492 EAYWMDEEDDTM 503 (528)
T ss_dssp HHHCC-------
T ss_pred HHHCCCcccccc
Confidence 999997665543
No 5
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.93 E-value=2.7e-23 Score=188.70 Aligned_cols=244 Identities=17% Similarity=0.253 Sum_probs=206.3
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcc-cHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICSID-YANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~id-na~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.+. +.+.+..|+..|..++...+ +...+.+.|+++.|+.+|.+++..+|..|+++|++++.+++..+..
T Consensus 4 i~~L~~~L~~~--~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 4 VEKLVKLLTST--DSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp HHHHHHHTTCS--CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 45566666653 36889999999999987654 7888999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+++.|+++.|+.+|.+ .+..++..|+++|++++.+++.....+.+.|+++.|+++|.+++..++..|+++|.+|+...+
T Consensus 82 ~~~~~~i~~l~~ll~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~ 160 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTS-TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD 160 (252)
T ss_dssp HHHTTHHHHHHHHTTC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999996 678999999999999999899999999999999999999999999999999999999999888
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHH
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELE 338 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~ 338 (361)
..+..+.+.|+++.|+.+|.++ +..++..++.+|.+++..++.........+ .+....+-++. ...+..+
T Consensus 161 ~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~-----~i~~L~~ll~~--~~~~v~~ 230 (252)
T 4hxt_A 161 EAIKAIVDAGGVEVLVKLLTST---DSEVQKEAARALANIASGPTSAIKAIVDAG-----GVEVLQKLLTS--TDSEVQK 230 (252)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSBHHHHHHHHHTT-----HHHHHHHGGGC--SCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCC-----CHHHHHHHHCC--CcHHHHH
Confidence 8889999999999999999988 999999999999999987776544433322 22233333332 3346777
Q ss_pred HHHHHHHHhcCCCCCccc
Q psy14164 339 YVNSVLTEVFEEDSPEEF 356 (361)
Q Consensus 339 ~~~~il~~~f~~~~~~~~ 356 (361)
.+..+|.++.........
T Consensus 231 ~a~~~L~~l~~~~~~~~~ 248 (252)
T 4hxt_A 231 EAQRALENIKSGGWLEHH 248 (252)
T ss_dssp HHHHHHHHHHHTCBCCC-
T ss_pred HHHHHHHHHHcCCCcccc
Confidence 888888877765554433
No 6
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.93 E-value=1e-23 Score=187.77 Aligned_cols=185 Identities=18% Similarity=0.285 Sum_probs=174.0
Q ss_pred CCHHHHHHHHHHHHHhh-cCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHH
Q psy14164 112 DQKDICIGALDNLSDYI-CSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLT 190 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lv-e~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~ 190 (361)
.+.+.+..|+..|..+. .+.++...+.+.|+++.|+.+|.++++.+|..|+++|++++.+++..++.+++.|++|.|+.
T Consensus 24 ~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ 103 (210)
T 4db6_A 24 PDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ 103 (210)
T ss_dssp SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHH
Confidence 45688899999999998 45667788999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV 270 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i 270 (361)
+|.+ .+..++..|+|+|++++.+++.....+++.|+++.|+++|++++.+++..|+++|.+|+..++..+..+.+.|++
T Consensus 104 lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i 182 (210)
T 4db6_A 104 LLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGAL 182 (210)
T ss_dssp HTTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred HHcC-CcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCH
Confidence 9997 578999999999999999999888899999999999999999999999999999999999888999999999999
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
+.|+.+|.++ +..+++.|+.+|.+|+.
T Consensus 183 ~~L~~ll~~~---~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 183 EKLEQLQSHE---NEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHHHHGGGCS---CHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHhc
Confidence 9999999988 99999999999999874
No 7
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.92 E-value=1.8e-22 Score=198.79 Aligned_cols=238 Identities=14% Similarity=0.186 Sum_probs=197.9
Q ss_pred CHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHh
Q psy14164 113 QKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTS 191 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~L 191 (361)
+.+.+..|++.|.+++... ++...+...|+++.|+.+|.++++.+|..|+++|++++.+++...+.+++.|++|.|+.+
T Consensus 205 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l 284 (450)
T 2jdq_A 205 DTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHL 284 (450)
T ss_dssp CHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHH
Confidence 4577888999999998754 456678889999999999999999999999999999999999988889999999999999
Q ss_pred hccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcH
Q psy14164 192 IEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMV 270 (361)
Q Consensus 192 L~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i 270 (361)
|.+ ++..+|..|+|+|++++.+++...+.+++.|+++.|+.+|.+++.++|..|+|+|++|+.. .++....+++.|++
T Consensus 285 l~~-~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i 363 (450)
T 2jdq_A 285 LSS-PKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCI 363 (450)
T ss_dssp TTC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCH
T ss_pred HcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCH
Confidence 997 5789999999999999999998888999999999999999999999999999999999976 67788888899999
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHH-----HHHHhhcChhhhHHHHHHHHHHHH
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLN-----FIKEKHAGNEVYHKELEYVNSVLT 345 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le-----~~~~~l~~~~e~~~e~~~~~~il~ 345 (361)
+.|+.+|..+ +.++++.++.+|.+++..++............+...+. +.+..+..+ ++.++++.+..+++
T Consensus 364 ~~L~~ll~~~---~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~-~~~~v~~~a~~~l~ 439 (450)
T 2jdq_A 364 KPLCDLLTVM---DSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSH-ENQEIYQKAFDLIE 439 (450)
T ss_dssp HHHHHGGGSS---CHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHHHcC-CCHHHHHHHHHHHH
Confidence 9999999988 99999999999999998665422110000012233332 335556655 56688999999999
Q ss_pred HhcCCCCCcc
Q psy14164 346 EVFEEDSPEE 355 (361)
Q Consensus 346 ~~f~~~~~~~ 355 (361)
+||+++++++
T Consensus 440 ~~~~~~~~~~ 449 (450)
T 2jdq_A 440 HYFGTEDEDS 449 (450)
T ss_dssp HHHCCC----
T ss_pred HHCCcccccC
Confidence 9998776553
No 8
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.91 E-value=1.4e-22 Score=185.24 Aligned_cols=234 Identities=15% Similarity=0.255 Sum_probs=192.7
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHhh-cCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy14164 102 KIIKTLKENQDQKDICIGALDNLSDYI-CSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFII 180 (361)
Q Consensus 102 ~~l~~L~~~~~~~~~~~~Al~~L~~lv-e~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~ 180 (361)
..+..|.+ .+.+.+..|+..|..++ .+.++...+.+.|+++.|+.+|+++++.+|..|+++|++++.+++..+..++
T Consensus 16 ~~~~~L~s--~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~ 93 (252)
T 4db8_A 16 QMTQQLNS--DDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 93 (252)
T ss_dssp HHHHHHHS--SCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 33444544 23467788888885543 3445667789999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchH
Q psy14164 181 QTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQV 260 (361)
Q Consensus 181 ~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~ 260 (361)
+.|++|.|+.+|.+ ++..++..|+|+|++++.+.+.....+.+.|+++.|+.+|++++..++..|+|+|.+|+...+..
T Consensus 94 ~~g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 172 (252)
T 4db8_A 94 DAGALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 172 (252)
T ss_dssp HTTHHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred HcCCHHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHH
Confidence 99999999999997 57899999999999999988777688999999999999999999999999999999999988888
Q ss_pred HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHH
Q psy14164 261 KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYV 340 (361)
Q Consensus 261 ~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~ 340 (361)
+..+.+.|+++.|+.+|.++ +..+++.++.+|.+++..++.........+ .+....+-++ + ...+..+.+
T Consensus 173 ~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g-----~i~~L~~ll~-~-~~~~v~~~A 242 (252)
T 4db8_A 173 IQAVIDAGALPALVQLLSSP---NEQILQEALWALSNIASGGNEQKQAVKEAG-----ALEKLEQLQS-H-ENEKIQKEA 242 (252)
T ss_dssp HHHHHHTTCHHHHHHGGGCS---SHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-----HHHHHHTTTT-C-SSSHHHHTH
T ss_pred HHHHHHCCCHHHHHHHHCCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHCC-----cHHHHHHHhC-C-CCHHHHHHH
Confidence 99999999999999999998 999999999999999987775544332221 2222233332 2 344667777
Q ss_pred HHHHHHhc
Q psy14164 341 NSVLTEVF 348 (361)
Q Consensus 341 ~~il~~~f 348 (361)
..+|.+++
T Consensus 243 ~~~L~~l~ 250 (252)
T 4db8_A 243 QEALEKLQ 250 (252)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 77777665
No 9
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.90 E-value=8.7e-22 Score=175.22 Aligned_cols=200 Identities=15% Similarity=0.232 Sum_probs=170.5
Q ss_pred HHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChh
Q psy14164 138 LKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEE 217 (361)
Q Consensus 138 ~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~ 217 (361)
..-|+.++|+.+|+++++.+|..|+++|++++.+++..+..+++.|++|.|+++|.+ .+..++..|+|+|++++.+++.
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~ 87 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSS-PNEQILQEALWALSNIASGGNE 87 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTSCHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCcH
Confidence 345789999999999999999999999999999999999999999999999999997 5789999999999999999999
Q ss_pred hHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHH
Q psy14164 218 CLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALAS 297 (361)
Q Consensus 218 ~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~ 297 (361)
....+++.|+++.|+.+|++++..++..|+|+|.+|+..++..+..+++.|+++.|+.+|.++ +..+++.++++|.+
T Consensus 88 ~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~aL~~ 164 (210)
T 4db6_A 88 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP---NEQILQEALWALSN 164 (210)
T ss_dssp HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC---CHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888889999999999999999998 99999999999999
Q ss_pred HHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhc
Q psy14164 298 LIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVF 348 (361)
Q Consensus 298 L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f 348 (361)
++..++.........+ .++...+-+. + ...+..+.+..+|.++-
T Consensus 165 l~~~~~~~~~~~~~~g-----~i~~L~~ll~-~-~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 165 IASGGNEQKQAVKEAG-----ALEKLEQLQS-H-ENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HHTSCHHHHHHHHHTT-----HHHHHHHGGG-C-SCHHHHHHHHHHHHHHC
T ss_pred HHcCCcHHHHHHHHCC-----CHHHHHHHHh-C-CCHHHHHHHHHHHHHHh
Confidence 9998765544332222 1222222332 2 45567778888887664
No 10
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.90 E-value=1.1e-21 Score=178.09 Aligned_cols=198 Identities=19% Similarity=0.296 Sum_probs=181.9
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcC-cccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICS-IDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~-idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.+ .+.+.+..|+..|..++.. .++...+.+.|+++.|+.+|.++++.+|..|+++|++++..++..+..
T Consensus 46 i~~L~~ll~~--~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 123 (252)
T 4hxt_A 46 VEVLVKLLTS--TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 123 (252)
T ss_dssp HHHHHHHTTC--SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHhC--CCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4445555554 3468899999999999987 677888999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+++.|+++.|++++.+ .+..++..|+++|++++.+++.....+++.|+++.|+.+|.+++..++..|+++|.+|+..++
T Consensus 124 ~~~~~~i~~L~~~l~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 202 (252)
T 4hxt_A 124 IVDAGGVEVLVKLLTS-TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPT 202 (252)
T ss_dssp HHHTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBH
T ss_pred HHHCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999996 578999999999999999988888899999999999999999999999999999999999888
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
..+..+.+.|+++.|+.++.++ +..+++.|+++|.+|....+
T Consensus 203 ~~~~~l~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 203 SAIKAIVDAGGVEVLQKLLTST---DSEVQKEAQRALENIKSGGW 244 (252)
T ss_dssp HHHHHHHHTTHHHHHHHGGGCS---CHHHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHHHCCCHHHHHHHHCCC---cHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999988 99999999999999998664
No 11
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.90 E-value=1.2e-21 Score=198.96 Aligned_cols=236 Identities=16% Similarity=0.191 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHh
Q psy14164 113 QKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTS 191 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~L 191 (361)
+.+.+..|+..|.+++... +....+...|+++.|+.+|.+++..+|..|+++|++++.+++...+.+++.|++|.|+.+
T Consensus 270 d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l 349 (530)
T 1wa5_B 270 DTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLL 349 (530)
T ss_dssp CHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHH
Confidence 3567888999999998654 345677888999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-Cc--hHHHHHHhCC
Q psy14164 192 IEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NN--QVKQVLLSMG 268 (361)
Q Consensus 192 L~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~--~~~~~l~~~g 268 (361)
|.+ .+..++..|+|+|++++.+++.....+++.|+++.|+.+|.+++.++|..|+|+|.+|+.. .+ +....+++.|
T Consensus 350 L~~-~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~ 428 (530)
T 1wa5_B 350 LSS-PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQG 428 (530)
T ss_dssp TTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTT
T ss_pred HcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCC
Confidence 997 4789999999999999999988888899999999999999999999999999999999985 44 7888999999
Q ss_pred cHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHh-hccCcchHHHHHH-----HHHHhhcChhhhHHHHHHHHH
Q psy14164 269 MVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSL-CRLEPLNLKFKLN-----FIKEKHAGNEVYHKELEYVNS 342 (361)
Q Consensus 269 ~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~-~~~~~l~l~~~Le-----~~~~~l~~~~e~~~e~~~~~~ 342 (361)
+++.|+.+|... +..+++.++.+|.+++..++..... +.... .+...+. +.+..++.+ .+.++++++..
T Consensus 429 ~l~~L~~ll~~~---~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~L~~L~~~-~~~~v~~~a~~ 503 (530)
T 1wa5_B 429 CIKPLCDLLEIA---DNRIIEVTLDALENILKMGEADKEARGLNIN-ENADFIEKAGGMEKIFNCQQN-ENDKIYEKAYK 503 (530)
T ss_dssp CHHHHHHHTTTC---CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC-HHHHHHHHTTHHHHHHGGGGC-SCHHHHHHHHH
T ss_pred CHHHHHHHHhCC---CHHHHHHHHHHHHHHHHhhhhhhhccccccc-HHHHHHHHcCcHHHHHHHHcC-CCHHHHHHHHH
Confidence 999999999988 9999999999999999876543211 10000 1122222 345566644 67889999999
Q ss_pred HHHHhcCCCCCc
Q psy14164 343 VLTEVFEEDSPE 354 (361)
Q Consensus 343 il~~~f~~~~~~ 354 (361)
++++||..++++
T Consensus 504 il~~~~~~~~~~ 515 (530)
T 1wa5_B 504 IIETYFGEEEDA 515 (530)
T ss_dssp HHHHHSSSCC--
T ss_pred HHHHHCCccccc
Confidence 999999876654
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.90 E-value=4.7e-22 Score=181.67 Aligned_cols=195 Identities=19% Similarity=0.298 Sum_probs=177.2
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhc-CcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYIC-SIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve-~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.+. +.+.+..|+..|..++. +.++...+.+.|+++.|+.+|+++++.+|..|+++|++++.+.+..+..
T Consensus 56 i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (252)
T 4db8_A 56 LPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (252)
T ss_dssp HHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHH
Confidence 34455555553 36889999999999987 5678888999999999999999999999999999999999998887688
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+++.|++|.|+++|.+ .+..++..|+|+|++++.+++.....+++.|+++.|+++|.+++..++..|+++|.+|+..++
T Consensus 134 ~~~~~~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 212 (252)
T 4db8_A 134 VIDAGALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 212 (252)
T ss_dssp HHHTTHHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCH
T ss_pred HHHCCCHHHHHHHHhC-CCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCH
Confidence 9999999999999987 578999999999999999998888899999999999999999999999999999999998888
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
..+..+++.|+++.|+.+|.++ +.++++.|+++|.+|+.
T Consensus 213 ~~~~~~~~~g~i~~L~~ll~~~---~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 213 EQKQAVKEAGALEKLEQLQSHE---NEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HHHHHHHHTTHHHHHHTTTTCS---SSHHHHTHHHHHHTTC-
T ss_pred HHHHHHHHCCcHHHHHHHhCCC---CHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998 99999999999998864
No 13
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.89 E-value=7e-22 Score=192.36 Aligned_cols=193 Identities=16% Similarity=0.169 Sum_probs=173.6
Q ss_pred CCHHHHHHHHHHHHHhhcC--cccHHHHHHCCCHHHHHHh-hcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH-hcChHHH
Q psy14164 112 DQKDICIGALDNLSDYICS--IDYANDFLKMGGLPVLQPL-LEGSDPELRWRAAETVADIVQNNPFSQNFII-QTDFLNL 187 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~--idna~~~~~~Gg~~~Lv~L-L~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~-~~g~l~~ 187 (361)
.+.+.+..|...|..+... .+++..+.+.||+|+|+++ +++++..++..|+++|.|++..++..+..+. ..|++|.
T Consensus 139 ~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~ 218 (354)
T 3nmw_A 139 ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAF 218 (354)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHH
Confidence 4568889999999999863 4577889999999999997 5778999999999999999987877777777 7899999
Q ss_pred HHHhhccCCCH---HHHHHHHHHHHHHhc---CChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHH
Q psy14164 188 LLTSIEHDSNT---TVQVKSLYAVSCLVR---ENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVK 261 (361)
Q Consensus 188 Ll~LL~~~~~~---~v~~~Al~ALS~l~r---~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~ 261 (361)
|+++|.+..+. .+++.|+|+|+|++. +++...+.+++.|+++.|+.+|++++..+++.|+|+|++|+..+++.+
T Consensus 219 Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~ 298 (354)
T 3nmw_A 219 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQ 298 (354)
T ss_dssp HHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHH
T ss_pred HHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHH
Confidence 99999865432 599999999999997 788899999999999999999999999999999999999998889999
Q ss_pred HHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHH
Q psy14164 262 QVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQS 307 (361)
Q Consensus 262 ~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~ 307 (361)
..+++.|+|++|+.+|.++ +..+++.|+.+|.+|+...|..++
T Consensus 299 ~~i~~~G~i~~Lv~LL~s~---~~~i~~~A~~aL~nL~~~~~~~~~ 341 (354)
T 3nmw_A 299 EALWDMGAVSMLKNLIHSK---HKMIAMGSAAALRNLMANRPAKYK 341 (354)
T ss_dssp HHHHHTTHHHHHHTTTTCS---SHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred HHHHHCCCHHHHHHHHhCC---CHHHHHHHHHHHHHHHcCCHHHHh
Confidence 9999999999999999998 999999999999999998876553
No 14
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.89 E-value=2.9e-21 Score=188.01 Aligned_cols=227 Identities=11% Similarity=0.071 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhhcCcc-cHHHHHHCCC-HHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHhcChHHHHHH
Q psy14164 114 KDICIGALDNLSDYICSID-YANDFLKMGG-LPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQNFIIQTDFLNLLLT 190 (361)
Q Consensus 114 ~~~~~~Al~~L~~lve~id-na~~~~~~Gg-~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~~~g~l~~Ll~ 190 (361)
.+.+..|...|..++..-+ +...+...|| +|+|+.+|.+++++++..|+|+|+|++.+ ++.++..+++.|++|+|++
T Consensus 98 ~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~ 177 (354)
T 3nmw_A 98 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 177 (354)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHH
Confidence 4678899999999986654 5555666777 99999999999999999999999999986 7889999999999999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHH-hhCcHHHHHHhhccCCH----HHHHHHHHHHHHHhc---CCchHHH
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFI-KRDGFSVLLRCIQSKKE----KLVIKSCFLIACLCT---DNNQVKQ 262 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~-~~ggi~~Lv~lL~s~~~----~v~~kA~~ll~~L~~---~~~~~~~ 262 (361)
+|.+..+..+++.|+++|.||+.+++.....+. ..|+++.|+++|.+++. .++..|+|+|++|+. .+++.++
T Consensus 178 lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~ 257 (354)
T 3nmw_A 178 CALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQ 257 (354)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 865445779999999999999997777777777 78999999999987644 699999999999997 6788999
Q ss_pred HHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHH
Q psy14164 263 VLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNS 342 (361)
Q Consensus 263 ~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~ 342 (361)
.+++.|+++.|+.+|.++ +..+++.|+++|.+|+..+++......+.+ . +.-..+-++. ......+.+..
T Consensus 258 ~i~~~g~i~~Lv~lL~~~---~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G-~----i~~Lv~LL~s--~~~~i~~~A~~ 327 (354)
T 3nmw_A 258 ILRENNCLQTLLQHLKSH---SLTIVSNACGTLWNLSARNPKDQEALWDMG-A----VSMLKNLIHS--KHKMIAMGSAA 327 (354)
T ss_dssp HHHTTTHHHHHHHHTTCS---CHHHHHHHHHHHHHHTSSCHHHHHHHHHTT-H----HHHHHTTTTC--SSHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHcCC---ChHHHHHHHHHHHHHhCCCHHHHHHHHHCC-C----HHHHHHHHhC--CCHHHHHHHHH
Confidence 999999999999999998 999999999999999977765443332222 1 2222223322 23455666666
Q ss_pred HHHHhcCC
Q psy14164 343 VLTEVFEE 350 (361)
Q Consensus 343 il~~~f~~ 350 (361)
.|.++...
T Consensus 328 aL~nL~~~ 335 (354)
T 3nmw_A 328 ALRNLMAN 335 (354)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 66666654
No 15
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=197.05 Aligned_cols=192 Identities=16% Similarity=0.170 Sum_probs=171.9
Q ss_pred CCHHHHHHHHHHHHHhhcC--cccHHHHHHCCCHHHHHHh-hcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH-hcChHHH
Q psy14164 112 DQKDICIGALDNLSDYICS--IDYANDFLKMGGLPVLQPL-LEGSDPELRWRAAETVADIVQNNPFSQNFII-QTDFLNL 187 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~--idna~~~~~~Gg~~~Lv~L-L~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~-~~g~l~~ 187 (361)
.+.+.+..|+..|.++... .++...+.+.||+++|+.+ +.+++..++..|+.+|+|++..++..+..+. ..|++|.
T Consensus 255 ~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~ 334 (458)
T 3nmz_A 255 ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAF 334 (458)
T ss_dssp SCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHH
Confidence 4567888999999998763 4577888999999999997 5678899999999999999997777777777 7999999
Q ss_pred HHHhhccCCCH---HHHHHHHHHHHHHhc---CChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHH
Q psy14164 188 LLTSIEHDSNT---TVQVKSLYAVSCLVR---ENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVK 261 (361)
Q Consensus 188 Ll~LL~~~~~~---~v~~~Al~ALS~l~r---~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~ 261 (361)
|+++|.+..+. .+++.|+|+|+||+. +++...+.+++.|+++.|+.+|.+++..+++.|+|+|++|+..+++.+
T Consensus 335 Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~ 414 (458)
T 3nmz_A 335 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQ 414 (458)
T ss_dssp HHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHH
Confidence 99999875432 599999999999997 788899999999999999999999999999999999999998889999
Q ss_pred HHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHH
Q psy14164 262 QVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQ 306 (361)
Q Consensus 262 ~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~ 306 (361)
..+++.|+|++|+.+|.+. +..+++.|+.+|.+|+..+|..+
T Consensus 415 ~~i~~~G~I~~Lv~LL~s~---~~~v~~~Aa~AL~nL~~~~p~ky 456 (458)
T 3nmz_A 415 EALWDMGAVSMLKNLIHSK---HKMIAMGSAAALRNLMANRPAKY 456 (458)
T ss_dssp HHHHHHTHHHHHHTTTTCS---SHHHHHHHHHHHHHHHTCCSCC-
T ss_pred HHHHHCCCHHHHHHHHhCC---CHHHHHHHHHHHHHHHcCCHhhh
Confidence 9999999999999999998 99999999999999999887544
No 16
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.87 E-value=3.3e-20 Score=186.18 Aligned_cols=227 Identities=11% Similarity=0.071 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHhhcCcc-cHHHHHHCCC-HHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHhcChHHHHHH
Q psy14164 114 KDICIGALDNLSDYICSID-YANDFLKMGG-LPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQNFIIQTDFLNLLLT 190 (361)
Q Consensus 114 ~~~~~~Al~~L~~lve~id-na~~~~~~Gg-~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~~~g~l~~Ll~ 190 (361)
...+..|...|..++..-+ +...+...|| +|+|+.+|.+++++++..|+|+|+|++.+ ++.++..+++.|++|+|++
T Consensus 214 ~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~ 293 (458)
T 3nmz_A 214 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 293 (458)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHH
Confidence 3568889999999987655 4445656777 99999999999999999999999999986 7889999999999999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHH-hhCcHHHHHHhhccCCH----HHHHHHHHHHHHHhc---CCchHHH
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFI-KRDGFSVLLRCIQSKKE----KLVIKSCFLIACLCT---DNNQVKQ 262 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~-~~ggi~~Lv~lL~s~~~----~v~~kA~~ll~~L~~---~~~~~~~ 262 (361)
+|.+..+..+++.|+.+|.||+.+++.....+. ..||++.|+++|.+++. .++..|+|+|++|+. .+++.++
T Consensus 294 lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~ 373 (458)
T 3nmz_A 294 CALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQ 373 (458)
T ss_dssp HHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 865445789999999999999987767777777 79999999999987643 599999999999997 6889999
Q ss_pred HHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHH
Q psy14164 263 VLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNS 342 (361)
Q Consensus 263 ~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~ 342 (361)
.+++.|+++.|+.+|.++ +..+++.|+++|.+|+..+++......+.+ . +.-...-+.. ......+.+..
T Consensus 374 ~i~~~G~i~~Lv~LL~~~---~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G-~----I~~Lv~LL~s--~~~~v~~~Aa~ 443 (458)
T 3nmz_A 374 ILRENNCLQTLLQHLKSH---SLTIVSNACGTLWNLSARNPKDQEALWDMG-A----VSMLKNLIHS--KHKMIAMGSAA 443 (458)
T ss_dssp HHHHTTHHHHHHHHSSCS---CHHHHHHHHHHHHHHHSSCHHHHHHHHHHT-H----HHHHHTTTTC--SSHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHcCC---ChHHHHHHHHHHHHHHcCCHHHHHHHHHCC-C----HHHHHHHHhC--CCHHHHHHHHH
Confidence 999999999999999998 999999999999999977765443322211 1 2222223322 23455666766
Q ss_pred HHHHhcCC
Q psy14164 343 VLTEVFEE 350 (361)
Q Consensus 343 il~~~f~~ 350 (361)
.|.++...
T Consensus 444 AL~nL~~~ 451 (458)
T 3nmz_A 444 ALRNLMAN 451 (458)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 67666543
No 17
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.86 E-value=4e-20 Score=185.45 Aligned_cols=241 Identities=12% Similarity=0.172 Sum_probs=181.5
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhh--------cCC--------CHHHHHHHHHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLL--------EGS--------DPELRWRAAET 164 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL--------~s~--------~~~vr~~Aa~~ 164 (361)
...+..|.. +.+.+.+..|.+.|..+....++...+.. |++|+|+.+| .++ +..++..|+|+
T Consensus 89 ~~Lv~lL~~-~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~a 166 (457)
T 1xm9_A 89 REAVSLLRR-TGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGC 166 (457)
T ss_dssp HHHHHHHTT-CCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHH
T ss_pred HHHHHHHhh-CCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHH
Confidence 344455542 34568888999999999888677777889 9999999999 333 46677799999
Q ss_pred HHHHhhcCHHHHHHHHhc-ChHHHHHHhhccC------------------------------------------------
Q psy14164 165 VADIVQNNPFSQNFIIQT-DFLNLLLTSIEHD------------------------------------------------ 195 (361)
Q Consensus 165 Lg~iaqnn~~~q~~v~~~-g~l~~Ll~LL~~~------------------------------------------------ 195 (361)
|+|++.+ +.+++.+.+. |++|+|+.+|.+.
T Consensus 167 L~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (457)
T 1xm9_A 167 LRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKS 245 (457)
T ss_dssp HHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--------
T ss_pred HHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhccccccccccccc
Confidence 9999987 8899999998 9999999888630
Q ss_pred --------------------------------------------------CCHHHHHHHHHHHHHHhcCChhh---H-HH
Q psy14164 196 --------------------------------------------------SNTTVQVKSLYAVSCLVRENEEC---L-KE 221 (361)
Q Consensus 196 --------------------------------------------------~~~~v~~~Al~ALS~l~r~~~~~---~-~~ 221 (361)
.++.++..|+|||+|+++++... . +.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~ 325 (457)
T 1xm9_A 246 STGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQL 325 (457)
T ss_dssp --------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHH
T ss_pred ccchhhccchhhhhccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHHHHHH
Confidence 12456777899999999986432 2 33
Q ss_pred HH-hhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCC---CChhHHHHHHHHHHH
Q psy14164 222 FI-KRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDA---LDTEMNEHLLSALAS 297 (361)
Q Consensus 222 f~-~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~---~d~~~~e~al~aL~~ 297 (361)
++ +.||++.|+++|.+++.+++++|+|+|++|+.+ +..+ .++..|++++|+++|..++. .+.++...++.+|.+
T Consensus 326 ~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~-~~~~-~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~n 403 (457)
T 1xm9_A 326 IGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 403 (457)
T ss_dssp HHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS-GGGH-HHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHH
T ss_pred HHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcC-HHHH-HHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHH
Confidence 44 689999999999999999999999999999874 4444 45556899999999998610 123688899999999
Q ss_pred HHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcCCCC
Q psy14164 298 LIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEEDS 352 (361)
Q Consensus 298 L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~~~~ 352 (361)
++..+++......+. .++ ..+..+..++.+.++|+.+..+|.+||...+
T Consensus 404 i~~~~~~~~~~i~~~-g~l-----~~L~~L~~~~~~~~i~~~A~~~L~~~~~~~~ 452 (457)
T 1xm9_A 404 LMASQPQLAKQYFSS-SML-----NNIINLCRSSASPKAAEAARLLLSDMWSSKE 452 (457)
T ss_dssp HHTTCTHHHHHHCCH-HHH-----HHHHHHHHCTTCHHHHHHHHHHHHTTSSSTT
T ss_pred HHhcCHHHHHHHHHc-CCH-----HHHHHHHcCCCcHHHHHHHHHHHHHHHcchh
Confidence 998877644433222 133 2333444342267899999999999997654
No 18
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.86 E-value=1.9e-20 Score=171.88 Aligned_cols=198 Identities=10% Similarity=0.097 Sum_probs=165.6
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhh-cCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYI-CSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFI 179 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lv-e~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v 179 (361)
...+..|.+.+...+.+..|...|..++ .+.++...++..||+|+|+++|.++++++|..|+|+|.|++.+++.++..+
T Consensus 11 ~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I 90 (233)
T 3tt9_A 11 ERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEV 90 (233)
T ss_dssp HHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 4455556654444467778888888887 456678889999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc----------------cCCHHHH
Q psy14164 180 IQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ----------------SKKEKLV 243 (361)
Q Consensus 180 ~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~----------------s~~~~v~ 243 (361)
.+.|++|+|+++|.+..+..+++.|+.+|.+|+. ++.....+.+ +|++.|++++. +.+..++
T Consensus 91 ~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~ 168 (233)
T 3tt9_A 91 AELNGVPRLLQVLKQTRDLETKKQITGLLWNLSS-NDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDIF 168 (233)
T ss_dssp HHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHH
T ss_pred HHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHHHH
Confidence 9999999999999854578999999999999976 4555566664 68999988663 1367999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHhC-CcHHHHHHhccCC---CCCChhHHHHHHHHHHHHHh
Q psy14164 244 IKSCFLIACLCTDNNQVKQVLLSM-GMVEQMCVLIDIE---DALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 244 ~kA~~ll~~L~~~~~~~~~~l~~~-g~i~~Lv~lL~~~---~~~d~~~~e~al~aL~~L~~ 300 (361)
..|+.+|.||+..+++.|+.+.+. |+|+.|+.+|+.. ...+.+.+|+++.+|.+|.-
T Consensus 169 ~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~ 229 (233)
T 3tt9_A 169 YNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSY 229 (233)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHHh
Confidence 999999999999888999999986 6789999999863 22367899999999999874
No 19
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.85 E-value=1.7e-19 Score=183.79 Aligned_cols=200 Identities=16% Similarity=0.250 Sum_probs=174.2
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHhhcC-cccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy14164 102 KIIKTLKENQDQKDICIGALDNLSDYICS-IDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFII 180 (361)
Q Consensus 102 ~~l~~L~~~~~~~~~~~~Al~~L~~lve~-idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~ 180 (361)
..+..|.. +++.+.+..|++.|..++.. .++...++..|++|+|+.+|.+++..++..|+|+|+|++.+++.++..++
T Consensus 123 ~Lv~lL~~-~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~ 201 (529)
T 3tpo_A 123 KFVSFLGK-TDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVI 201 (529)
T ss_dssp HHHHHHTC-TTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 34444433 34567888899999998754 45667899999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHhhccCC----CHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC
Q psy14164 181 QTDFLNLLLTSIEHDS----NTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD 256 (361)
Q Consensus 181 ~~g~l~~Ll~LL~~~~----~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~ 256 (361)
+.|++++|+.+|.... ...+.+.++|+|++++++..+........++++.|+.+|.+++..++..|+|+|++|+..
T Consensus 202 ~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~ 281 (529)
T 3tpo_A 202 KHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDG 281 (529)
T ss_dssp HTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSS
T ss_pred HcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhh
Confidence 9999999999998532 246788999999999998766555555578999999999999999999999999999998
Q ss_pred CchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHH
Q psy14164 257 NNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEA 305 (361)
Q Consensus 257 ~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~ 305 (361)
.+.....+++.|+++.|+.+|.++ +..++..++.+|.+|+..++..
T Consensus 282 ~~~~~~~v~~~g~i~~Lv~lL~~~---~~~v~~~a~~aL~nl~~~~~~~ 327 (529)
T 3tpo_A 282 PNERIEMVVKKGVVPQLVKLLGAT---ELPIVTPALRAIGNIVTGTDEQ 327 (529)
T ss_dssp CHHHHHHHHTTTCHHHHHHHHTCS---CHHHHHHHHHHHHHHTTSCHHH
T ss_pred hhhhHHHHHhccchHHHHHHhcCC---ChhHHHHHHHHHHHHHccchHH
Confidence 888888999999999999999998 9999999999999999887653
No 20
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.85 E-value=1.5e-19 Score=183.44 Aligned_cols=192 Identities=15% Similarity=0.250 Sum_probs=170.7
Q ss_pred CCCHHHHHHHHHHHHHhhc-CcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHH
Q psy14164 111 QDQKDICIGALDNLSDYIC-SIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLL 189 (361)
Q Consensus 111 ~~~~~~~~~Al~~L~~lve-~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll 189 (361)
++..+.+..|++.|..+.. +.++...+++.|++|.|+.+|.+++..+|..|+|+|+|++.+++.+++.+++.|++++|+
T Consensus 112 ~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll 191 (510)
T 3ul1_B 112 TDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLL 191 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHH
Confidence 3456778899999999864 556778899999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCC----CHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHH
Q psy14164 190 TSIEHDS----NTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLL 265 (361)
Q Consensus 190 ~LL~~~~----~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~ 265 (361)
.+|.... ...+++.++|+|++++++..+........++++.|+++|.+++..++..|+|+|++|+...++....++
T Consensus 192 ~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~ 271 (510)
T 3ul1_B 192 ALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVV 271 (510)
T ss_dssp HHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHH
Confidence 9998532 246788999999999998765544445568899999999999999999999999999998888888899
Q ss_pred hCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHH
Q psy14164 266 SMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEA 305 (361)
Q Consensus 266 ~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~ 305 (361)
+.|+++.|+.+|.++ +..++..++++|.+|+..++..
T Consensus 272 ~~g~i~~Lv~lL~~~---~~~v~~~al~aL~nl~~~~~~~ 308 (510)
T 3ul1_B 272 KKGVVPQLVKLLGAT---ELPIVTPALRAIGNIVTGTDEQ 308 (510)
T ss_dssp TTTCHHHHHHHHTCS---CHHHHHHHHHHHHHHTTSCHHH
T ss_pred hcccchhhhhhhcCC---ChhhhhHHHHHHHHhhcCCHHH
Confidence 999999999999998 9999999999999999887643
No 21
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.85 E-value=3.8e-20 Score=185.61 Aligned_cols=195 Identities=13% Similarity=0.176 Sum_probs=166.6
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCccc-HHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICSIDY-ANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idn-a~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.++ +.+.+..|+..|..++..-++ ...+.+.||+|+|+.+|+++++.++..|+|+|.|++.+|+.++..
T Consensus 4 l~~lv~~L~s~--~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~ 81 (457)
T 1xm9_A 4 IPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 81 (457)
T ss_dssp HHHHHHHHHSS--CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHHHCCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 34556667664 457889999999999865555 458999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhh--------cc--------CCHHH
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCI--------QS--------KKEKL 242 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL--------~s--------~~~~v 242 (361)
+++.|++|+|+++|....+..++..|+|+|+||+.+ +.....+++ ||++.|+++| .+ .+..+
T Consensus 82 i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHH
Confidence 999999999999998446789999999999999997 667777888 9999999999 33 24677
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHhC-CcHHHHHHhccCC---CCCChhHHHHHHHHHHHHH
Q psy14164 243 VIKSCFLIACLCTDNNQVKQVLLSM-GMVEQMCVLIDIE---DALDTEMNEHLLSALASLI 299 (361)
Q Consensus 243 ~~kA~~ll~~L~~~~~~~~~~l~~~-g~i~~Lv~lL~~~---~~~d~~~~e~al~aL~~L~ 299 (361)
++.|+|+|++|+.. ++.+..+++. |+++.|+.+|.+. ...+..++++++.+|.++.
T Consensus 160 ~~~a~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs 219 (457)
T 1xm9_A 160 FFNATGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 219 (457)
T ss_dssp HHHHHHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcc
Confidence 77999999999986 8899999998 9999999999861 0016678999999999886
No 22
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.84 E-value=8.8e-19 Score=177.34 Aligned_cols=203 Identities=15% Similarity=0.278 Sum_probs=177.3
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcC-cccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICS-IDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~-idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.+. ++.+.+..|+..|..+... .++...++..|++++|+.+|.++++.+|..|+|+|++++.+++.++..
T Consensus 119 v~~Lv~lL~~~-~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~ 197 (528)
T 4b8j_A 119 VPRFVQFLTRE-DFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 197 (528)
T ss_dssp HHHHHHHHTCT-TCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCC-CCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHH
Confidence 34444555442 3367889999999999875 567778899999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+++.|++++|+.+|..+.+..++..|+|+|++++++.+... .....++++.|+.+|.+++..++..|+|+|++|+...+
T Consensus 198 i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~-~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~ 276 (528)
T 4b8j_A 198 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPS-FEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTN 276 (528)
T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCC-HHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCH
T ss_pred HHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCc-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999655788999999999999999864433 33458999999999999999999999999999998877
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHH
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQS 307 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~ 307 (361)
...+.+++.|+++.|+.+|.++ +..+++.|+++|.+|+..++....
T Consensus 277 ~~~~~~~~~g~v~~Lv~lL~~~---~~~v~~~a~~~L~nl~~~~~~~~~ 322 (528)
T 4b8j_A 277 DKIQAVIEAGVCPRLVELLLHP---SPSVLIPALRTVGNIVTGDDAQTQ 322 (528)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHcCC---ChhHHHHHHHHHHHHHcCCHHHHH
Confidence 7788999999999999999998 899999999999999998775443
No 23
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.83 E-value=1.3e-19 Score=192.26 Aligned_cols=188 Identities=13% Similarity=0.145 Sum_probs=167.3
Q ss_pred CHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHh-cChHHHHHH
Q psy14164 113 QKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQ-TDFLNLLLT 190 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~-~g~l~~Ll~ 190 (361)
+...+..|+..|.++.... ++...+++.||++.|+.||.|+++.||..|+++|+|++.+. ..+..+++ .|+++.|+.
T Consensus 594 ~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~-~~~~~~v~~~g~l~~Lv~ 672 (810)
T 3now_A 594 TALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSE-DVIKMFEGNNDRVKFLAL 672 (810)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSH-HHHHHHHSSSSHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCh-HHHHHHHhccCcHHHHHH
Confidence 3445668999999998764 56778999999999999999999999999999999999865 46666765 799999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHh-hCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCc
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIK-RDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGM 269 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~-~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~ 269 (361)
|+.+ .+..+|+.|+||||+|+.+++...+.+++ .||++.|+++|.+++.++|..|+|+|+||+.++++....+++.|+
T Consensus 673 LL~s-~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~ 751 (810)
T 3now_A 673 LCED-EDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDI 751 (810)
T ss_dssp GGGC-SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTH
T ss_pred HhcC-CCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 9997 57899999999999999988888899998 899999999999999999999999999999988889999999999
Q ss_pred HHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 270 VEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 270 i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
+++|+.+|+.....+.++.+.|+.+|.+++...
T Consensus 752 i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g 784 (810)
T 3now_A 752 MELLSGLGQLPDDTRAKAREVATQCLAAAERYR 784 (810)
T ss_dssp HHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCC
Confidence 999999997642236899999999999998643
No 24
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.83 E-value=3.5e-19 Score=189.00 Aligned_cols=226 Identities=12% Similarity=0.071 Sum_probs=181.4
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHH---HCCCHHHHHHhhcCC-CHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHH
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFL---KMGGLPVLQPLLEGS-DPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLL 188 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~---~~Gg~~~Lv~LL~s~-~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~L 188 (361)
+...+..|...|..++...+....|. ..|++|+|+.||.++ +...+..|+|+|+|++.+++..++.+++.|++|.|
T Consensus 549 ~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~L 628 (810)
T 3now_A 549 TEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKI 628 (810)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHH
Confidence 45678889999999876555444332 257999999999876 44556789999999999999999999999999999
Q ss_pred HHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHh-hCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHh-
Q psy14164 189 LTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIK-RDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLS- 266 (361)
Q Consensus 189 l~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~-~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~- 266 (361)
+.+|.+ .++.+++.|+++|+||+.+ +..+..|++ .|+++.|+.++.+++..+|+.|+|+|++|+.+++...+.+++
T Consensus 629 v~LL~s-~~~~Vq~~A~~~L~NLa~~-~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~ 706 (810)
T 3now_A 629 EYYLME-DHLYLTRAAAQCLCNLVMS-EDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAI 706 (810)
T ss_dssp HHHHHS-CCTTHHHHHHHHHHHHTTS-HHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTS
T ss_pred HHHHcC-CCHHHHHHHHHHHHHHhCC-hHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 999997 4678999999999999985 557778885 789999999999999999999999999999877888889998
Q ss_pred CCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhh-cCh-hhhHHHHHHHHHHH
Q psy14164 267 MGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKH-AGN-EVYHKELEYVNSVL 344 (361)
Q Consensus 267 ~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l-~~~-~e~~~e~~~~~~il 344 (361)
.|++++|+.+|.++ +.+++..|+++|.+++..+++........+ .+ ..+..+ +.+ ....++++.+...|
T Consensus 707 ~g~I~~Lv~LL~s~---d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G-~i-----~~L~~LL~~~d~~~~~i~e~Al~aL 777 (810)
T 3now_A 707 ASWLDILHTLIANP---SPAVQHRGIVIILNMINAGEEIAKKLFETD-IM-----ELLSGLGQLPDDTRAKAREVATQCL 777 (810)
T ss_dssp TTHHHHHHHHHTCS---SHHHHHHHHHHHHHHHTTCHHHHHHHHTST-HH-----HHHTTSCCCTTSTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHCCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHCC-CH-----HHHHHHHhCcccCcHHHHHHHHHHH
Confidence 89999999999998 999999999999999987765444333322 22 222233 222 14567777777777
Q ss_pred HHhcC
Q psy14164 345 TEVFE 349 (361)
Q Consensus 345 ~~~f~ 349 (361)
+....
T Consensus 778 ~~ll~ 782 (810)
T 3now_A 778 AAAER 782 (810)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65543
No 25
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.82 E-value=3.4e-18 Score=168.05 Aligned_cols=203 Identities=14% Similarity=0.250 Sum_probs=175.7
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcC-cccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICS-IDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~-idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
+...+..|.+ .++.+.+..|+..|..++.. .++...++..|+++.|+.+|+++++.+|..|+++|++++.+++.++..
T Consensus 66 i~~L~~~L~~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~ 144 (450)
T 2jdq_A 66 VARFVEFLKR-KENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDY 144 (450)
T ss_dssp HHHHHHHHTC-TTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHH
Confidence 4444555554 23567889999999998863 456677888999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCC-hhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCC
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVREN-EECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDN 257 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~-~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~ 257 (361)
+++.|+++.|++++.++.+..++..|+|+|++++++. +.....++ .++++.|+.+|.+++..++..|+|++.+|+...
T Consensus 145 ~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~ 223 (450)
T 2jdq_A 145 VLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGP 223 (450)
T ss_dssp HHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSS
T ss_pred HHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCC
Confidence 9999999999999996567899999999999999876 33322333 789999999999999999999999999999887
Q ss_pred chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHH
Q psy14164 258 NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQS 307 (361)
Q Consensus 258 ~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~ 307 (361)
+..+..+.+.|+++.|+.+|.++ +..+++.++++|.+++..++...+
T Consensus 224 ~~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~~l~~~~~~~~~ 270 (450)
T 2jdq_A 224 NDKIQAVIDAGVCRRLVELLMHN---DYKVVSPALRAVGNIVTGDDIQTQ 270 (450)
T ss_dssp HHHHHHHHHTTTHHHHHHHTTCS---CHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cHHHHHHHHcCcHHHHHHHHCCC---chhHHHHHHHHHHHHhhCChHHHH
Confidence 78888899999999999999988 999999999999999988765433
No 26
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.82 E-value=3.8e-18 Score=173.05 Aligned_cols=191 Identities=13% Similarity=0.224 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHh
Q psy14164 113 QKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTS 191 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~L 191 (361)
+.+.+..|+..|..++... ++...++..|+++.|+.+|.++++.+|..|+|+|++++.+++.++..++..|+++.|+.+
T Consensus 144 ~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~l 223 (530)
T 1wa5_B 144 PEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGL 223 (530)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHG
T ss_pred CHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHH
Confidence 4578889999999988643 466778889999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHH
Q psy14164 192 IEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVE 271 (361)
Q Consensus 192 L~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~ 271 (361)
|.+ .+..++..|+|+|++++++..+....+...++++.|+.+|.+++..++..|+|+|.+|+...+.....+++.|+++
T Consensus 224 l~~-~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~ 302 (530)
T 1wa5_B 224 FNS-NKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPK 302 (530)
T ss_dssp GGS-CCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHH
T ss_pred hcc-CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHH
Confidence 997 6789999999999999998633334556689999999999999999999999999999988888888999999999
Q ss_pred HHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHH
Q psy14164 272 QMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQS 307 (361)
Q Consensus 272 ~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~ 307 (361)
.|+.+|.++ +..+++.|+++|.+++..++....
T Consensus 303 ~Lv~lL~~~---~~~v~~~a~~~L~~l~~~~~~~~~ 335 (530)
T 1wa5_B 303 RLVELLSHE---STLVQTPALRAVGNIVTGNDLQTQ 335 (530)
T ss_dssp HHHHGGGCS---CHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHCCC---ChhhHHHHHHHHHHHHcCCHHHHH
Confidence 999999988 999999999999999988765443
No 27
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.82 E-value=1.9e-18 Score=158.57 Aligned_cols=202 Identities=17% Similarity=0.125 Sum_probs=158.3
Q ss_pred CHHHHHHhhcCCCH--HHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhH
Q psy14164 142 GLPVLQPLLEGSDP--ELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECL 219 (361)
Q Consensus 142 g~~~Lv~LL~s~~~--~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~ 219 (361)
.+|+|+++|+++++ .++..|+++|.+++.+++..+..+.+.|++|+|+++|.+ .++.++..|+|||.||+.+++.+.
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s-~~~~vq~~Aa~aL~nLa~~~~~nk 87 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKV-QNEDVQRAVCGALRNLVFEDNDNK 87 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGC-CCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHhCCHHHH
Confidence 58999999999988 999999999999999999999999999999999999997 578999999999999999899999
Q ss_pred HHHHhhCcHHHHHHhhc-cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCC-------------CCCCh
Q psy14164 220 KEFIKRDGFSVLLRCIQ-SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIE-------------DALDT 285 (361)
Q Consensus 220 ~~f~~~ggi~~Lv~lL~-s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~-------------~~~d~ 285 (361)
..+.++||++.|+++|. +++..++..|+.+|.+|.. .+..+..+++ +.+++|+.+|..+ ...+.
T Consensus 88 ~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~ 165 (233)
T 3tt9_A 88 LEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSS-NDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDF 165 (233)
T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCH
T ss_pred HHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchH
Confidence 99999999999999998 5799999999999999976 4567777776 5699999887411 01267
Q ss_pred hHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhh-cChhhhHHHHHHHHHHHHHh
Q psy14164 286 EMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKH-AGNEVYHKELEYVNSVLTEV 347 (361)
Q Consensus 286 ~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l-~~~~e~~~e~~~~~~il~~~ 347 (361)
+++++|..+|.+|+..+++.-+.-+.-. ++.+.|-..++.- ...+-.....|-|..+|.++
T Consensus 166 ~v~~na~~~L~nLss~~~~~R~~~r~~~-Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nL 227 (233)
T 3tt9_A 166 DIFYNVTGCLRNMSSAGADGRKAMRRCD-GLIDSLVHYVRGTIADYQPDDKATENCVCILHNL 227 (233)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHTST-THHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHCC-CcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHH
Confidence 8999999999999987754433222211 2333333333322 11111223566777777653
No 28
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.81 E-value=2.2e-18 Score=177.27 Aligned_cols=198 Identities=16% Similarity=0.197 Sum_probs=168.2
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhc-CcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYIC-SIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQN 177 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve-~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~ 177 (361)
+...+..|.+ .+.+.+..|...|..++. +.++...++..||+|+||.+|.+++..++..|+|+|+|++.+ |+.++.
T Consensus 50 i~~LV~~L~s--~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~ 127 (584)
T 3l6x_A 50 LPEVIAMLGF--RLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKI 127 (584)
T ss_dssp HHHHHHHTTC--SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHCC--CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHH
Confidence 3555666654 456788889999999884 677888999999999999999999999999999999999986 799999
Q ss_pred HHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc------------------cCC
Q psy14164 178 FIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ------------------SKK 239 (361)
Q Consensus 178 ~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~------------------s~~ 239 (361)
.+++.|++|+|+++|.+..+..++..|+++|.+|+. ++.....++ .+|++.|+++|. +.+
T Consensus 128 ~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~-~~~~k~~I~-~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d 205 (584)
T 3l6x_A 128 AIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS-HDSIKMEIV-DHALHALTDEVIIPHSGWEREPNEDCKPRHIEW 205 (584)
T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT-SGGGHHHHH-HHTHHHHHHHTHHHHHCCC----------CCCC
T ss_pred HHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhhHHHH-hccHHHHHHHHhccccccccccccccccccccc
Confidence 999999999999999975677899999999999998 566666777 578999999872 236
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHhC-CcHHHHHHhccCC---CCCChhHHHHHHHHHHHHHhc
Q psy14164 240 EKLVIKSCFLIACLCTDNNQVKQVLLSM-GMVEQMCVLIDIE---DALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 240 ~~v~~kA~~ll~~L~~~~~~~~~~l~~~-g~i~~Lv~lL~~~---~~~d~~~~e~al~aL~~L~~~ 301 (361)
..++..|+++|.||+..+++.+..+++. |+++.|+.+|.+. ...+...+++|+.+|.+|...
T Consensus 206 ~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~ 271 (584)
T 3l6x_A 206 ESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQ 271 (584)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhcc
Confidence 8999999999999999888889999985 6678999999751 112678999999999999865
No 29
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.79 E-value=3.7e-18 Score=162.21 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=137.4
Q ss_pred CCHHHHHHHHHHHHHhhcCcc-cHHHHHHCCCHHHHHHhhcC-CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHH
Q psy14164 112 DQKDICIGALDNLSDYICSID-YANDFLKMGGLPVLQPLLEG-SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLL 189 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~id-na~~~~~~Gg~~~Lv~LL~s-~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll 189 (361)
.+.+.+..|++.|..++.+-+ +...+++.||+++|+.+|++ ++..+|..|+|+|++++.+++..++.|++.|++|.|+
T Consensus 94 ~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~ 173 (296)
T 1xqr_A 94 GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLM 173 (296)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHH
Confidence 456889999999999987544 55678899999999999985 5899999999999999999999999999999999999
Q ss_pred HhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHH
Q psy14164 190 TSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVL 264 (361)
Q Consensus 190 ~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l 264 (361)
.+|.+ .+..++++|+|+|++++.+++.....|++.|+++.|+.+|.+++.+++..|+++|.+|+...+.....+
T Consensus 174 ~lL~~-~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~~~~~~~ 247 (296)
T 1xqr_A 174 RAMQQ-QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVREC 247 (296)
T ss_dssp HHHHS-SCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHcC-CCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCChhHHHHH
Confidence 99997 578999999999999999999999999999999999999999999999999999999999865544443
No 30
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.78 E-value=1.3e-17 Score=167.60 Aligned_cols=223 Identities=11% Similarity=0.075 Sum_probs=173.2
Q ss_pred CCHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcC--CCHHHHHHHHHHHHHHhhcCHH---HHHHHHhcChH
Q psy14164 112 DQKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEG--SDPELRWRAAETVADIVQNNPF---SQNFIIQTDFL 185 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s--~~~~vr~~Aa~~Lg~iaqnn~~---~q~~v~~~g~l 185 (361)
.+.+.+..|+..|.+++... ++...+.+.||++.|+.+|.+ +++.++..|+++|++++.+++. .+..+++.|++
T Consensus 278 ~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i 357 (529)
T 1jdh_A 278 DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGL 357 (529)
T ss_dssp SCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCCh
Confidence 45678899999999998753 578889999999999999975 4489999999999999987655 57789999999
Q ss_pred HHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHH-------------
Q psy14164 186 NLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIAC------------- 252 (361)
Q Consensus 186 ~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~------------- 252 (361)
|.|+++|.++.+..+++.++|+|+|++.+. ..+..+++.|+++.|+.+|.+++..+|+.|+|++++
T Consensus 358 ~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~-~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~~~~~~~~i~ 436 (529)
T 1jdh_A 358 PVVVKLLHPPSHWPLIKATVGLIRNLALCP-ANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIV 436 (529)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHHHTTSG-GGHHHHHHTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHH
T ss_pred hHHHHHhccccchHHHHHHHHHHHHHhcCh-hhhHHHHHcCCHHHHHHHHHHHhHHHHHHHhcccCchhhhccccHHHHH
Confidence 999999997655699999999999999864 456889999999999999999889999988887776
Q ss_pred ---------HhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHH
Q psy14164 253 ---------LCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFI 323 (361)
Q Consensus 253 ---------L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~ 323 (361)
|+. .++.+..+.+.|+++.|+.+|.++ +..++..+..+|.++..+.+. .......+ ++ +.
T Consensus 437 ~~~~~al~~L~~-~~~~~~~l~~~~~v~~l~~ll~~~---~~~v~~~a~~~l~~l~~~~~~-~~~i~~~~-~~-----~~ 505 (529)
T 1jdh_A 437 EGCTGALHILAR-DVHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQDKEA-AEAIEAEG-AT-----AP 505 (529)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTTCHHHHHHGGGCS---CHHHHHHHHHHHHHHTTSHHH-HHHHHHTT-CH-----HH
T ss_pred HHHHHHHHHHhc-CchHHHHHhccCCccHHHHHHcCC---chHHHHHHHHHHHHHhcCHHH-HHHHHHcC-Ch-----HH
Confidence 433 456677899999999999999998 999999999999999865322 11111111 22 33
Q ss_pred HHhhcChhhhHHHHHHHHHHHHHh
Q psy14164 324 KEKHAGNEVYHKELEYVNSVLTEV 347 (361)
Q Consensus 324 ~~~l~~~~e~~~e~~~~~~il~~~ 347 (361)
+..+..+ ++.++++++..+|.++
T Consensus 506 L~~l~~~-~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 506 LTELLHS-RNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHGGGC-SSHHHHHHHHHHHHHH
T ss_pred HHHHhcC-CCHHHHHHHHHHHHhc
Confidence 4455433 6788999999998765
No 31
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.76 E-value=6.5e-17 Score=166.31 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=144.6
Q ss_pred CCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcC-Chhh
Q psy14164 140 MGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRE-NEEC 218 (361)
Q Consensus 140 ~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~-~~~~ 218 (361)
.+++++||.+|.++++.++..|+++|.+++.+++..+..+++.|+||+|+++|.+ .+..++..|+|||.||+.+ ++.+
T Consensus 47 ~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s-~~~~vq~~Aa~AL~nLa~~~~~~n 125 (584)
T 3l6x_A 47 QPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH-PKKEVHLGACGALKNISFGRDQDN 125 (584)
T ss_dssp CCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC-SSHHHHHHHHHHHHHHTSSSCHHH
T ss_pred cccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCC-CCHHHHHHHHHHHHHHHccCCHHH
Confidence 5789999999999999999999999999999999999999999999999999997 5789999999999999986 6889
Q ss_pred HHHHHhhCcHHHHHHhhcc-CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCC---------------CC
Q psy14164 219 LKEFIKRDGFSVLLRCIQS-KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIE---------------DA 282 (361)
Q Consensus 219 ~~~f~~~ggi~~Lv~lL~s-~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~---------------~~ 282 (361)
...++++||++.|+++|.+ .+..++..|+++|.+|+. .++.+..+++ ++++.|+++|..+ ..
T Consensus 126 k~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~-~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~ 203 (584)
T 3l6x_A 126 KIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS-HDSIKMEIVD-HALHALTDEVIIPHSGWEREPNEDCKPRHI 203 (584)
T ss_dssp HHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT-SGGGHHHHHH-HTHHHHHHHTHHHHHCCC----------CC
T ss_pred HHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC-CchhhHHHHh-ccHHHHHHHHhccccccccccccccccccc
Confidence 9999999999999999997 588999999999999987 5678888885 5799999987210 01
Q ss_pred CChhHHHHHHHHHHHHHhcChH
Q psy14164 283 LDTEMNEHLLSALASLIKDSPE 304 (361)
Q Consensus 283 ~d~~~~e~al~aL~~L~~~~~~ 304 (361)
.+.++++.|..+|.+|+..++.
T Consensus 204 ~d~~V~~nAa~~L~NLs~~~~~ 225 (584)
T 3l6x_A 204 EWESVLTNTAGCLRNVSSERSE 225 (584)
T ss_dssp CCHHHHHHHHHHHHHHTSSCHH
T ss_pred ccHHHHHHHHHHHHHHhcCCHH
Confidence 1579999999999999988754
No 32
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.5e-16 Score=163.74 Aligned_cols=185 Identities=11% Similarity=0.105 Sum_probs=155.3
Q ss_pred CCHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcCC--CHHHHHHHHHHHHHHhhcCH---HHHHHHHhcChH
Q psy14164 112 DQKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEGS--DPELRWRAAETVADIVQNNP---FSQNFIIQTDFL 185 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s~--~~~vr~~Aa~~Lg~iaqnn~---~~q~~v~~~g~l 185 (361)
.+.+.+..|+..|.+++... ++...+.+.||++.|+.+|.+. ...++..|+++|++++.+++ ..|..+++.|++
T Consensus 275 ~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l 354 (644)
T 2z6h_A 275 DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGL 354 (644)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccCh
Confidence 35678899999999998753 5677889999999999999763 37999999999999998765 567778999999
Q ss_pred HHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHH---------------------
Q psy14164 186 NLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVI--------------------- 244 (361)
Q Consensus 186 ~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~--------------------- 244 (361)
|.|+++|.+..+..+++.|+|+|+|++.+.. .+..+++.|+++.|+++|.+.+..+|+
T Consensus 355 ~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~-~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~ 433 (644)
T 2z6h_A 355 PVVVKLLHPPSHWPLIKATVGLIRNLALCPA-NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIV 433 (644)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHHHTTSGG-GHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHH
T ss_pred HHHHHHhCccCchHHHHHHHHHHHHHccCHH-HHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHHH
Confidence 9999999976557999999999999999644 558899999999999999876555544
Q ss_pred -HHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 245 -KSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 245 -kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
.|+.+|.+|+. ++..+..+.+.|+++.|+.+|.+. +..++..++.+|.+++..
T Consensus 434 ~~a~~aL~~La~-~~~~~~~l~~~~~i~~Lv~lL~~~---~~~v~~~a~~aL~~l~~~ 487 (644)
T 2z6h_A 434 EGCTGALHILAR-DVHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQD 487 (644)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTTCHHHHHHHTTCS---CHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhc-CHHHHHHHHhCCcHHHHHHHHcCC---CHHHHHHHHHHHHHHHcC
Confidence 55555555654 346677888999999999999988 899999999999999865
No 33
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.74 E-value=6e-16 Score=155.34 Aligned_cols=197 Identities=14% Similarity=0.190 Sum_probs=170.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
.+...+..|.+ ..+.+.+..|+..|..+....++...+.+.|+++.|+.+|+++++.++..|+++|++++.+++..+..
T Consensus 60 ~i~~Lv~~L~~-~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 138 (529)
T 1jdh_A 60 MVSAIVRTMQN-TNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 138 (529)
T ss_dssp HHHHHHHHHHH-CCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred hHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHH
Confidence 34445555554 23567889999999999988888889999999999999999999999999999999999998888999
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC-CHHHHHHHHHHHHHHhcCC
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK-KEKLVIKSCFLIACLCTDN 257 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~-~~~v~~kA~~ll~~L~~~~ 257 (361)
+.+.|++|.|+++|.+ .+..++..++.+|++++.+++.....+.+.||++.|+.+|++. +..++..++.++.+|+. .
T Consensus 139 i~~~g~i~~L~~ll~~-~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~ 216 (529)
T 1jdh_A 139 VRLAGGLQKMVALLNK-TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-C 216 (529)
T ss_dssp HHHHTHHHHHHHGGGC-CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-S
T ss_pred HHHcCCHHHHHHHHhc-CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhc-C
Confidence 9999999999999997 5778999999999999999999999999999999999999876 56777778889999986 5
Q ss_pred chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 258 NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 258 ~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..+..+++.|+++.|+.+|.++ +..+++.++++|.+++..
T Consensus 217 ~~~~~~~~~~g~~~~L~~ll~~~---~~~~~~~a~~~L~~l~~~ 257 (529)
T 1jdh_A 217 SSNKPAIVEAGGMQALGLHLTDP---SQRLVQNCLWTLRNLSDA 257 (529)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTSS---CHHHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHCCCHHHHHHHHhCC---ChHHHHHHHHHHHHHhcC
Confidence 67889999999999999999877 777777777777777654
No 34
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.5e-15 Score=157.90 Aligned_cols=197 Identities=14% Similarity=0.190 Sum_probs=172.6
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
.+...+..|.+ ..+.+.+..|+..|..+....++...+.+.|+++.|+.+|+++++.+|..|+++|++++.+++..+..
T Consensus 57 ~i~~Lv~~L~~-~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~ 135 (644)
T 2z6h_A 57 MVSAIVRTMQN-TNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 135 (644)
T ss_dssp HHHHHHHHHHS-CCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHH
T ss_pred hHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHH
Confidence 35555666664 34567889999999999988888889999999999999999999999999999999999998888889
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC-CHHHHHHHHHHHHHHhcCC
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK-KEKLVIKSCFLIACLCTDN 257 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~-~~~v~~kA~~ll~~L~~~~ 257 (361)
+.+.|++|.|+++|.+ .+..++..++.+|++++.+++.....+.+.||++.|+++|++. ..+++..++.++.+|+. .
T Consensus 136 v~~~g~i~~Lv~lL~~-~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~-~ 213 (644)
T 2z6h_A 136 VRLAGGLQKMVALLNK-TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-C 213 (644)
T ss_dssp HHHTTHHHHHHHGGGC-CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT-C
T ss_pred HHHCCChHHHHHHHCc-CCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhc-C
Confidence 9999999999999997 4668888888999999998899999999999999999999876 47888999999999986 5
Q ss_pred chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 258 NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 258 ~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..+..+++.|+++.|+.+|..+ +..+++.++++|.+|+..
T Consensus 214 ~~~~~~l~~~g~l~~L~~ll~~~---~~~~~~~a~~~L~nL~~~ 254 (644)
T 2z6h_A 214 SSNKPAIVEAGGMQALGLHLTDP---SQRLVQNCLWTLRNLSDA 254 (644)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTCS---CHHHHHHHHHHHHHHGGG
T ss_pred cccHHHHHHCCCHHHHHHHHhcC---CHHHHHHHHHHHHHHhhc
Confidence 77899999999999999999877 777888888887777654
No 35
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.69 E-value=1.7e-15 Score=161.33 Aligned_cols=185 Identities=12% Similarity=0.109 Sum_probs=155.7
Q ss_pred CCHHHHHHHHHHHHHhhcCc-ccHHHHHHCCCHHHHHHhhcC-C-CHHHHHHHHHHHHHHhhcCHH---HHHHHHhcChH
Q psy14164 112 DQKDICIGALDNLSDYICSI-DYANDFLKMGGLPVLQPLLEG-S-DPELRWRAAETVADIVQNNPF---SQNFIIQTDFL 185 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~i-dna~~~~~~Gg~~~Lv~LL~s-~-~~~vr~~Aa~~Lg~iaqnn~~---~q~~v~~~g~l 185 (361)
.+.+.+..|+..|..+.... ++...+.+.||++.|+.+|.+ + ...+|..|+++|++++.+++. .|..+.+.|++
T Consensus 411 ~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l 490 (780)
T 2z6g_A 411 DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGL 490 (780)
T ss_dssp SCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCH
Confidence 45678899999999998754 567788899999999999976 3 349999999999999987665 46788999999
Q ss_pred HHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHH----------------------HH
Q psy14164 186 NLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEK----------------------LV 243 (361)
Q Consensus 186 ~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~----------------------v~ 243 (361)
|.|+++|.++....+++.|+|+|+||+++ +..+..+.+.|+++.|+++|.+++.. ++
T Consensus 491 ~~L~~lL~~~~~~~v~~~A~~aL~nLa~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~ 569 (780)
T 2z6g_A 491 PVVVKLLHPPSHWPLIKATVGLIRNLALC-PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIV 569 (780)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHHHHHHSS-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHHHhcC-HHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHH
Confidence 99999999865569999999999999985 45568888999999999999875544 45
Q ss_pred HHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 244 IKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 244 ~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
..++.+|.+|+. ++..+..+.+.|+++.|+.+|.+. +..++..++.+|.+++..
T Consensus 570 ~~a~~aL~~La~-~~~~~~~l~~~~~i~~Lv~lL~~~---~~~v~~~a~~aL~~L~~~ 623 (780)
T 2z6g_A 570 EACTGALHILAR-DIHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQD 623 (780)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTCCHHHHHHGGGCS---CHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhc-ChhhHHHHHHCCcHHHHHHHHcCC---CHHHHHHHHHHHHHHhcC
Confidence 566667777765 567778888999999999999998 999999999999999854
No 36
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.66 E-value=8.8e-15 Score=155.86 Aligned_cols=185 Identities=14% Similarity=0.171 Sum_probs=163.8
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhh
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSI 192 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL 192 (361)
+.+.+..|+..|..+....++...+...|+++.|+.+|+++++.+|..|+++|++++.+++..+..+.+.|+++.|+.+|
T Consensus 206 d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL 285 (780)
T 2z6g_A 206 DVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL 285 (780)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHH
Confidence 56788899999999988878888899999999999999999999999999999999999989999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC-CHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHH
Q psy14164 193 EHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK-KEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVE 271 (361)
Q Consensus 193 ~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~-~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~ 271 (361)
.+ .+..++..++.+|.+++.+++.....+++.||++.|+.+|++. ...++..++.++.+|+. .+..+..+++.|+++
T Consensus 286 ~~-~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~-~~~~~~~i~~~g~l~ 363 (780)
T 2z6g_A 286 NK-TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-CSSNKPAIVEAGGMQ 363 (780)
T ss_dssp GC-CCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT-STTHHHHHHHTTHHH
T ss_pred hc-CCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhc-ChHHHHHHHHhchHH
Confidence 97 5778999999999999999999999999999999999999976 46677788899999986 567888899999999
Q ss_pred HHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 272 QMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 272 ~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
.|+.+|.+. +..+++.++++|.+|+...
T Consensus 364 ~Ll~lL~~~---~~~~~~~a~~~L~~L~~~~ 391 (780)
T 2z6g_A 364 ALGLHLTDP---SQRLVQNCLWTLRNLSDAA 391 (780)
T ss_dssp HHGGGTTCS---CHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCC---chHHHHHHHHHHHHHhccc
Confidence 999988876 7777777777777776543
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.64 E-value=3.3e-15 Score=156.60 Aligned_cols=277 Identities=10% Similarity=0.098 Sum_probs=175.8
Q ss_pred CHHHHHHHHhhcCCCCCCCCCCcccccCCCC-HH-hHHHHHHHHHhhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy14164 48 NLQDLLRYAVEAGSRSRAQEAPNINRAASMN-EA-NRGFLLDALNSMMVNVGAELEKIIKTLKENQDQKDICIGALDNLS 125 (361)
Q Consensus 48 ~l~~LL~w~~~~s~~~~~~~~~~~~~~~~~s-~e-~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~~~~~~~~~Al~~L~ 125 (361)
.+..|.+|+-.+ .|+..+.+ . +++ .+ -.+|-+.++ -+...+.-.+..+.+ .+...+..|...|.
T Consensus 417 ~l~~Lk~~A~~~-~p~~~~~d-----~-~~~~~~~v~~~~~~~l-----~eaGvIp~Lv~Ll~S--~s~~~re~A~~aL~ 482 (778)
T 3opb_A 417 XXXXXXXXXXXX-XPAADKVG-----A-EKAAKEDILLFNEKYI-----LRTELISFLKREMHN--LSPNCKQQVVRIIY 482 (778)
T ss_dssp -------------------CC-----T-HHHHHHHHHHHHHHHT-----TTTTHHHHHHHHGGG--SCHHHHHHHHHHHH
T ss_pred hhhhhhhhcccc-CcccCccc-----c-cccchHHHHHHHHHHH-----HHCcCHHHHHHHHcC--CCHHHHHHHHHHHH
Confidence 899999999776 35444332 1 111 11 011111111 112233333444433 46688999999999
Q ss_pred HhhcCcccHHHHHHCCCHHHHHHhhcCCCHH---HHHHHHHHHHHHh-hcCHHHHHHHHh---cChHHHHHHhhccCCCH
Q psy14164 126 DYICSIDYANDFLKMGGLPVLQPLLEGSDPE---LRWRAAETVADIV-QNNPFSQNFIIQ---TDFLNLLLTSIEHDSNT 198 (361)
Q Consensus 126 ~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~---vr~~Aa~~Lg~ia-qnn~~~q~~v~~---~g~l~~Ll~LL~~~~~~ 198 (361)
.++.+.++...+++.||+++|+.+|.+.... +|..|+++|+++. ..||.. .|-. .|++|+|+.||..++..
T Consensus 483 nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~--~f~~~~~~~aI~pLv~LL~~~~~~ 560 (778)
T 3opb_A 483 NITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL--IFKKYSALNAIPFLFELLPRSTPV 560 (778)
T ss_dssp HHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH--HSSSSCSTTHHHHHHHTSCCSSSC
T ss_pred HHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH--HcCCCccccchHHHHHHcCCCCCc
Confidence 9999999999999999999999999887554 8999999999998 556654 2211 39999999999832111
Q ss_pred -------------HHHHHHHHHHHHHhcCC----hhhHHHHHhh-CcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchH
Q psy14164 199 -------------TVQVKSLYAVSCLVREN----EECLKEFIKR-DGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQV 260 (361)
Q Consensus 199 -------------~v~~~Al~ALS~l~r~~----~~~~~~f~~~-ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~ 260 (361)
-.+..|+.||.||+... +.....++.. |+++.|..+|.+++..+|+.|+++|+||+.+ ++.
T Consensus 561 ~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~-~e~ 639 (778)
T 3opb_A 561 DDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSH-PLT 639 (778)
T ss_dssp SSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTS-GGG
T ss_pred ccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCC-cHH
Confidence 23779999999999975 2345677874 9999999999999999999999999999974 444
Q ss_pred H-HHHHhC------CcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHH-hhccCcchHHHHHHHHHHhhcChhh
Q psy14164 261 K-QVLLSM------GMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQS-LCRLEPLNLKFKLNFIKEKHAGNEV 332 (361)
Q Consensus 261 ~-~~l~~~------g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~-~~~~~~l~l~~~Le~~~~~l~~~~e 332 (361)
+ +.+... +.++.|+.++.++ |.++|..|.++|.+++..++...+ .+...+ +.+.|-+.++.. .+
T Consensus 640 i~~k~~~~~~~~~~~rL~lLV~Ll~s~---D~~~r~AAagALAnLts~~~~ia~~ll~~~~--gi~~Ll~lL~~~---~~ 711 (778)
T 3opb_A 640 IAAKFFNLENPQSLRNFNILVKLLQLS---DVESQRAVAAIFANIATTIPLIAKELLTKKE--LIENAIQVFADQ---ID 711 (778)
T ss_dssp TGGGTSCCSSHHHHHHHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHCHHHHHHHTTCHH--HHHHHHHHHHHT---TT
T ss_pred HHHHHHhhcCchhhccHHHHHHHHcCC---CHHHHHHHHHHHHHhcCCChHHHHHHHHccc--cHHHHHHHHhcc---CC
Confidence 3 233322 2388999999998 999999999999999877765433 232221 112222222222 24
Q ss_pred hHHHHHHHHHHHHHhcC
Q psy14164 333 YHKELEYVNSVLTEVFE 349 (361)
Q Consensus 333 ~~~e~~~~~~il~~~f~ 349 (361)
..+....+..++.+.+.
T Consensus 712 ~~~l~~R~~~~l~NL~~ 728 (778)
T 3opb_A 712 DIELRQRLLMLFFGLFE 728 (778)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 45566677777777665
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.5e-14 Score=148.88 Aligned_cols=219 Identities=16% Similarity=0.208 Sum_probs=169.5
Q ss_pred CHHhHHHHHHHHHhhcCCH--------HHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHhhcCcccHHHHHH---CCCHHH
Q psy14164 78 NEANRGFLLDALNSMMVNV--------GAELEKIIKTLKENQDQ-KDICIGALDNLSDYICSIDYANDFLK---MGGLPV 145 (361)
Q Consensus 78 s~e~~~~L~eal~~~~~~~--------~~~mk~~l~~L~~~~~~-~~~~~~Al~~L~~lve~idna~~~~~---~Gg~~~ 145 (361)
++.-|+-.-.+|.++..+. ...++-.+..|.+.... ...|..|+..|..+.-..+....|.. .|++++
T Consensus 470 s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~f~~~~~~~aI~p 549 (778)
T 3opb_A 470 SPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLIFKKYSALNAIPF 549 (778)
T ss_dssp CHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHHcCCCccccchHH
Confidence 4444555556666665222 11345556666654322 23789999999999877777766532 489999
Q ss_pred HHHhhcC-CCH-------------HHHHHHHHHHHHHhhcC----HHHHHHHHhc-ChHHHHHHhhccCCCHHHHHHHHH
Q psy14164 146 LQPLLEG-SDP-------------ELRWRAAETVADIVQNN----PFSQNFIIQT-DFLNLLLTSIEHDSNTTVQVKSLY 206 (361)
Q Consensus 146 Lv~LL~s-~~~-------------~vr~~Aa~~Lg~iaqnn----~~~q~~v~~~-g~l~~Ll~LL~~~~~~~v~~~Al~ 206 (361)
|+.||.. +.. --+..|+.+|+|++..+ +..+..+++. |++|.|..+|.+ .+..+|+.|++
T Consensus 550 Lv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s-~n~~VrrAA~e 628 (778)
T 3opb_A 550 LFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLD-ENVPLQRSTLE 628 (778)
T ss_dssp HHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGC-SSHHHHHHHHH
T ss_pred HHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhC-CCHHHHHHHHH
Confidence 9999983 221 12779999999999976 4567778885 999999999997 47799999999
Q ss_pred HHHHHhcCChhhH-HHHHhh------CcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhC-CcHHHHHHhcc
Q psy14164 207 AVSCLVRENEECL-KEFIKR------DGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSM-GMVEQMCVLID 278 (361)
Q Consensus 207 ALS~l~r~~~~~~-~~f~~~------ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~-g~i~~Lv~lL~ 278 (361)
+|+||+. ++..+ +.|... +++++|+.++++++.++|+.|+|+|+++++.++...+.+++. ++++.++.+|.
T Consensus 629 lI~NL~~-~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~ 707 (778)
T 3opb_A 629 LISNMMS-HPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFA 707 (778)
T ss_dssp HHHHHHT-SGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhC-CcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHh
Confidence 9999997 55553 456432 358899999999999999999999999988788888888887 79999999999
Q ss_pred C--CCCCChhHHHHHHHHHHHHHhc
Q psy14164 279 I--EDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 279 ~--~~~~d~~~~e~al~aL~~L~~~ 301 (361)
. + +.+++..++-++.+|+..
T Consensus 708 ~~~~---~~~l~~R~~~~l~NL~~~ 729 (778)
T 3opb_A 708 DQID---DIELRQRLLMLFFGLFEV 729 (778)
T ss_dssp HTTT---CHHHHHHHHHHHHHHHTT
T ss_pred ccCC---CHHHHHHHHHHHHHHHHh
Confidence 8 7 999999999999999973
No 39
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.44 E-value=1.3e-11 Score=126.60 Aligned_cols=221 Identities=19% Similarity=0.275 Sum_probs=174.7
Q ss_pred HHhHHHHHHHHHhhc---CCH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcc------------------cHH
Q psy14164 79 EANRGFLLDALNSMM---VNV--GAELEKIIKTLKENQDQKDICIGALDNLSDYICSID------------------YAN 135 (361)
Q Consensus 79 ~e~~~~L~eal~~~~---~~~--~~~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~id------------------na~ 135 (361)
++||.-+ .+|+++. +.+ ...|+-.+.+|.+..++.+-...+|+.|..+....+ ++.
T Consensus 37 eDRR~Av-~~Lk~~sk~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d 115 (651)
T 3grl_A 37 DDRRNAV-RALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTE 115 (651)
T ss_dssp HHHHHHH-HHHHHTTTTTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHH
T ss_pred hHHHHHH-HHHHHHHHHhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHH
Confidence 4444443 4466665 333 234888888888876777777778888877654332 223
Q ss_pred HHH-HCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHH-HHHHHHhc-ChHHHHHHhhccCCCHHHHHHHHHHHHHHh
Q psy14164 136 DFL-KMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPF-SQNFIIQT-DFLNLLLTSIEHDSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 136 ~~~-~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~-~q~~v~~~-g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~ 212 (361)
.|. +-++++.|+.+|++.+-.+|..++.+|..++.++|. .|+.++.. ++++.|+.+|++ ..+.+|-.|+..|++++
T Consensus 116 ~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d-~rE~iRneallLL~~Lt 194 (651)
T 3grl_A 116 IFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLAD-SREVIRNDGVLLLQALT 194 (651)
T ss_dssp HHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGC-SSHHHHHHHHHHHHHHH
T ss_pred HHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhC-chHHHHHHHHHHHHHHh
Confidence 343 457899999999999999999999999999999999 99999966 999999999996 57899999999999999
Q ss_pred cCChhhHHHHHhhCcHHHHHHhhccC----CHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCC---Ch
Q psy14164 213 RENEECLKEFIKRDGFSVLLRCIQSK----KEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDAL---DT 285 (361)
Q Consensus 213 r~~~~~~~~f~~~ggi~~Lv~lL~s~----~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~---d~ 285 (361)
++++..++.+.-.|+++.|+.++... ...+...++.++.+|+..+++.+..|.+.|+++.|+.+|..+++. ..
T Consensus 195 ~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~ 274 (651)
T 3grl_A 195 RSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSA 274 (651)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCH
T ss_pred cCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHH
Confidence 99999888888889999999999864 458999999999999999999999999999999999999865100 11
Q ss_pred hHHHH---HHHHHHHHHhc
Q psy14164 286 EMNEH---LLSALASLIKD 301 (361)
Q Consensus 286 ~~~e~---al~aL~~L~~~ 301 (361)
+.... ++.++..++..
T Consensus 275 Qk~~N~~~~L~iIrlLv~~ 293 (651)
T 3grl_A 275 QKVTNLHLMLQLVRVLVSP 293 (651)
T ss_dssp HHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 12222 56666666654
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=99.23 E-value=6.9e-10 Score=113.98 Aligned_cols=208 Identities=18% Similarity=0.235 Sum_probs=166.8
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcC--CCHHHHHHHHHHHHHHhhcC
Q psy14164 95 NVGAELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEG--SDPELRWRAAETVADIVQNN 172 (361)
Q Consensus 95 ~~~~~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s--~~~~vr~~Aa~~Lg~iaqnn 172 (361)
+..+-+.+.+.-+.+ +.-.++|..|+..|..+.. ++... +..+|++.|+..|+. .+.++-..++.+|.++...+
T Consensus 18 s~~etI~~L~~Rl~~-~tl~eDRR~Av~~Lk~~sk--~y~~~-Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~ 93 (651)
T 3grl_A 18 TEAETIQKLCDRVAS-STLLDDRRNAVRALKSLSK--KYRLE-VGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISND 93 (651)
T ss_dssp CHHHHHHHHHHHHHH-CCSHHHHHHHHHHHHHTTT--TTTTH-HHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC
T ss_pred ChhhHHHHHHHHHhh-ccchhHHHHHHHHHHHHHH--HhHHH-hhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCC
Confidence 345556666666665 3446899999999999975 44333 335689999999976 57888889999998887665
Q ss_pred HH-----------------HHHHHH-hcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChh-hHHHHHhh-CcHHHHH
Q psy14164 173 PF-----------------SQNFII-QTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEE-CLKEFIKR-DGFSVLL 232 (361)
Q Consensus 173 ~~-----------------~q~~v~-~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~-~~~~f~~~-ggi~~Lv 232 (361)
+. ..+.++ +.+.++.|+.+|++ .+..+|..++..|+.++.+.+. .++.++.. +|++.|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~-~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv 172 (651)
T 3grl_A 94 EEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE-FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLM 172 (651)
T ss_dssp --------------CHHHHHHHHHHHSTHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHH
T ss_pred CcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcC-ccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHH
Confidence 43 223343 45889999999986 6889999999999999999888 67777755 8999999
Q ss_pred HhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCC-CCChhHHHHHHHHHHHHHhcChHHHH
Q psy14164 233 RCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIED-ALDTEMNEHLLSALASLIKDSPEAQS 307 (361)
Q Consensus 233 ~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~-~~d~~~~e~al~aL~~L~~~~~~~~~ 307 (361)
.+|+++...+|.+|..+|.+|+.++++.++.+.-.|+++.|.+++.... .....+.+-++..|.+|++.++.-..
T Consensus 173 ~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~ 248 (651)
T 3grl_A 173 DLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQN 248 (651)
T ss_dssp GGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999999998751 01236788899999999999974433
No 41
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=99.21 E-value=9.7e-11 Score=122.98 Aligned_cols=165 Identities=15% Similarity=0.230 Sum_probs=136.0
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHH-hhccCCCHHHHHHHHHHHHHHhcC-ChhhH
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLT-SIEHDSNTTVQVKSLYAVSCLVRE-NEECL 219 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~-LL~~~~~~~v~~~Al~ALS~l~r~-~~~~~ 219 (361)
.+.|+++.|+|+++..|..||++|+++++ ++..+..++..|++++++. +|. +++..||..|++||.||+.+ .+...
T Consensus 35 ~i~Pll~~L~S~~~~~r~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~-D~~~~Vr~~A~gaLrnL~~~~g~d~~ 112 (684)
T 4gmo_A 35 KILPVLKDLKSPDAKSRTTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLT-DNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
T ss_dssp TTHHHHHHHSSSCCSHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcC-CCCHHHHHHHHHHHHHHHhhcCchHH
Confidence 57788899999999999999999999997 7889999999999988765 555 57889999999999999975 45667
Q ss_pred HHHHhhCcHHHHHHhhccCC---------------------HHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhcc
Q psy14164 220 KEFIKRDGFSVLLRCIQSKK---------------------EKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLID 278 (361)
Q Consensus 220 ~~f~~~ggi~~Lv~lL~s~~---------------------~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~ 278 (361)
..++..|++++|..+|.+.. ..+...++.++.+|+....+....+...+.++.|+.+|.
T Consensus 113 ~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~ 192 (684)
T 4gmo_A 113 VHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLI 192 (684)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHH
Confidence 77888999999999886421 123345778899999888888888999999999999986
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcChHHHHh
Q psy14164 279 IEDALDTEMNEHLLSALASLIKDSPEAQSL 308 (361)
Q Consensus 279 ~~~~~d~~~~e~al~aL~~L~~~~~~~~~~ 308 (361)
+......+++..|+.+|..+..+++..++.
T Consensus 193 ~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~ 222 (684)
T 4gmo_A 193 SADIAPQDIYEEAISCLTTLSEDNLKVGQA 222 (684)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHHhccCHHHHHH
Confidence 541224679999999999999999876554
No 42
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=99.05 E-value=3.2e-09 Score=111.41 Aligned_cols=191 Identities=13% Similarity=0.077 Sum_probs=150.7
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHH
Q psy14164 103 IIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LLEGSDPELRWRAAETVADIVQN-NPFSQNFII 180 (361)
Q Consensus 103 ~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~ 180 (361)
.++.|.+ .+.++|..|+..|..++++..+...+.+.|++.+++. +|.+++.+||..|+++|+|++.. .+.+...++
T Consensus 39 ll~~L~S--~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~ 116 (684)
T 4gmo_A 39 VLKDLKS--PDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCVHLY 116 (684)
T ss_dssp HHHHHSS--SCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHcCC--CCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 3444554 3457899999999999988777888999999988755 88999999999999999999975 588888999
Q ss_pred hcChHHHHHHhhccCC-------------C-------HHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhcc---
Q psy14164 181 QTDFLNLLLTSIEHDS-------------N-------TTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS--- 237 (361)
Q Consensus 181 ~~g~l~~Ll~LL~~~~-------------~-------~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s--- 237 (361)
..|++++|+.+|.+.. . ..+...++++|.+++.++..+...+...++++.|+.+|.+
T Consensus 117 ~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~ 196 (684)
T 4gmo_A 117 RLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISADI 196 (684)
T ss_dssp HTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCC
T ss_pred HcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCC
Confidence 9999999999985310 0 1234467889999999899999999999999999998854
Q ss_pred CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHH---HHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 238 KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVE---QMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 238 ~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~---~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
....++..|+.+|+.|+..++...+.+.+.+... .+..+.+ . +...+..+...|.++.
T Consensus 197 ~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~~~~~~~ll~~~~-~---~~~~~~la~giL~Ni~ 257 (684)
T 4gmo_A 197 APQDIYEEAISCLTTLSEDNLKVGQAITDDQETHVYDVLLKLAT-G---TDPRAVMACGVLHNVF 257 (684)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCSSCHHHHHHHHHH-S---SCTTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhccCHHHHHHHHhcchHHHHHHHHHHhc-C---CcHHHHHHHHHHHhHh
Confidence 2579999999999999999999999998877533 3333223 3 3445566777777764
No 43
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.99 E-value=3.5e-08 Score=86.50 Aligned_cols=151 Identities=17% Similarity=0.183 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
.....+..|.+ .+...+..|+..|..+-. -+.++.|+.+|.++++.+|..|+++|+.+..
T Consensus 15 ~~~~~i~~L~~--~~~~vr~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~-------- 74 (201)
T 3ltj_A 15 KVEMYIKNLQD--DSYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 74 (201)
T ss_dssp HHHHHHHHTTC--SCHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------
T ss_pred chHHHHHHhcC--CCHHHHHHHHHHHHhcCC----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------
Confidence 34555556655 345778888888876542 2468999999999999999999999998742
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
.++++.|+.+|.+ +++.+|..|+++|+.+.. ...++.|+.+|.+++..||..|++++..+..
T Consensus 75 ---~~~~~~L~~~l~d-~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--- 136 (201)
T 3ltj_A 75 ---ERAVEPLIKALKD-EDGWVRQSAAVALGQIGD-----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD--- 136 (201)
T ss_dssp ---GGGHHHHHHHTTC-SSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC---
T ss_pred ---HHHHHHHHHHHcC-CCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC---
Confidence 2578999999986 688999999999998732 2467888999999999999999999998843
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHH
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASL 298 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L 298 (361)
...++.|+.+|.++ +..+|..|+.+|..+
T Consensus 137 --------~~~~~~L~~~l~d~---~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 137 --------ERAVEPLIKALKDE---DGWVRQSAADALGEI 165 (201)
T ss_dssp --------GGGHHHHHHHTTCS---SHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHcCC---CHHHHHHHHHHHHHh
Confidence 25788899999888 899999999999888
No 44
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.97 E-value=4.2e-08 Score=86.67 Aligned_cols=184 Identities=15% Similarity=0.114 Sum_probs=136.7
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFI 179 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v 179 (361)
+...+..|.+ .+...+..|+..|..+-. -.+++.|+.+|.++++.+|..|+++|+.+..
T Consensus 21 ~~~L~~~L~~--~~~~vR~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------- 79 (211)
T 3ltm_A 21 VEMYIKNLQD--DSYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--------- 79 (211)
T ss_dssp HHHHHHHTTC--SSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHcC--CCHHHHHHHHHHHHHhCC----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC---------
Confidence 4555555553 456788888888877643 2579999999999999999999999998752
Q ss_pred HhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCch
Q psy14164 180 IQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQ 259 (361)
Q Consensus 180 ~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~ 259 (361)
.+.++.|+.+|.+ ++..+|..|+++|+.+.. ...++.|+.+|.+++..||..|++++..+..
T Consensus 80 --~~~~~~L~~~l~~-~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---- 141 (211)
T 3ltm_A 80 --ERAVEPLIKALKD-EDGWVRQSAAVALGQIGD-----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD---- 141 (211)
T ss_dssp --GGGHHHHHHHTTC-SSHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----
T ss_pred --HHHHHHHHHHHcC-CCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC----
Confidence 3578999999986 678999999999998842 2467889999999999999999999999842
Q ss_pred HHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHH
Q psy14164 260 VKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEY 339 (361)
Q Consensus 260 ~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~ 339 (361)
...++.|..+|.++ +..+|..++.+|..+.. +.. ...|.+.+. ++.......
T Consensus 142 -------~~~~~~L~~~l~d~---~~~vr~~a~~aL~~~~~--~~~-----------~~~L~~~l~-----d~~~~vr~~ 193 (211)
T 3ltm_A 142 -------ERAVEPLIKALKDE---DGWVRQSAADALGEIGG--ERV-----------RAAMEKLAE-----TGTGFARKV 193 (211)
T ss_dssp -------GGGHHHHHHHTTCS---SHHHHHHHHHHHHHHCS--HHH-----------HHHHHHHHH-----HCCHHHHHH
T ss_pred -------HHHHHHHHHHHcCC---CHHHHHHHHHHHHHhCc--hhH-----------HHHHHHHHh-----CCCHHHHHH
Confidence 24688899999888 89999999999988842 222 222332221 134456667
Q ss_pred HHHHHHHhcCC
Q psy14164 340 VNSVLTEVFEE 350 (361)
Q Consensus 340 ~~~il~~~f~~ 350 (361)
+...|..+.+.
T Consensus 194 A~~aL~~~~~~ 204 (211)
T 3ltm_A 194 AVNYLETHKSF 204 (211)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHhcCCC
Confidence 77777665543
No 45
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=98.97 E-value=2.3e-08 Score=88.33 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=120.1
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFII 180 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~ 180 (361)
...+..|.+ .+...+..|+..|..+-. .+.++.|+.+|.++++.||..|+++|+.+..
T Consensus 53 ~~L~~~l~~--~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~---------- 110 (211)
T 3ltm_A 53 EPLIKALKD--EDAWVRRAAADALGQIGD----------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD---------- 110 (211)
T ss_dssp HHHHHHTTC--SCHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHhhCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------
Confidence 344444444 356778888888777642 2468999999999999999999999998853
Q ss_pred hcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchH
Q psy14164 181 QTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQV 260 (361)
Q Consensus 181 ~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~ 260 (361)
.+.++.|+.+|.+ ++..||..|+++|+.+. . ...++.|..+|++++..||..|++++..+-.
T Consensus 111 -~~~~~~L~~~l~d-~~~~vr~~a~~aL~~~~--~---------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~----- 172 (211)
T 3ltm_A 111 -ERAVEPLIKALKD-EDWFVRIAAAFALGEIG--D---------ERAVEPLIKALKDEDGWVRQSAADALGEIGG----- 172 (211)
T ss_dssp -GGGHHHHHHHTTC-SSHHHHHHHHHHHHHHC--C---------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS-----
T ss_pred -HHHHHHHHHHHhC-CCHHHHHHHHHHHHHcC--C---------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----
Confidence 3578999999975 68899999999999983 2 2467889999999999999999999999842
Q ss_pred HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 261 KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 261 ~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
...++.|..+|..+ +..+|..|..+|..+...+.
T Consensus 173 ------~~~~~~L~~~l~d~---~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 173 ------ERVRAAMEKLAETG---TGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp ------HHHHHHHHHHHHHC---CHHHHHHHHHHHHC------
T ss_pred ------hhHHHHHHHHHhCC---CHHHHHHHHHHHHhcCCCCC
Confidence 24577888899888 99999999999988876553
No 46
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=98.94 E-value=3.2e-08 Score=86.80 Aligned_cols=150 Identities=15% Similarity=0.139 Sum_probs=119.7
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFII 180 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~ 180 (361)
...+..|.+ .+...+..|+..|..+-. -.+++.|+.+|.++++.||..|+++|+.+..
T Consensus 48 ~~L~~~l~~--~~~~vr~~a~~~L~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---------- 105 (201)
T 3ltj_A 48 EPLIKALKD--EDAWVRRAAADALGQIGD----------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD---------- 105 (201)
T ss_dssp HHHHHHTTC--SSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHhhCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------
Confidence 444444433 345677888877776532 2468999999999999999999999998742
Q ss_pred hcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchH
Q psy14164 181 QTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQV 260 (361)
Q Consensus 181 ~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~ 260 (361)
..+++.|+.+|.+ ++..||..|+++|+.+.. ...++.|+.+|.+++..||..|++++..+- .+
T Consensus 106 -~~~~~~L~~~l~d-~~~~vr~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~--~~-- 168 (201)
T 3ltj_A 106 -ERAVEPLIKALKD-EDWFVRIAAAFALGEIGD-----------ERAVEPLIKALKDEDGWVRQSAADALGEIG--GE-- 168 (201)
T ss_dssp -GGGHHHHHHHTTC-SSHHHHHHHHHHHHHHTC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC--SH--
T ss_pred -HHHHHHHHHHHcC-CCHHHHHHHHHHHHHhCC-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--ch--
Confidence 2478999999975 688999999999999842 346788999999999999999999999983 22
Q ss_pred HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 261 KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 261 ~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
..++.|..+|..+ +..+|..|..+|..+-
T Consensus 169 -------~~~~~L~~~l~d~---~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 169 -------RVRAAMEKLAETG---TGFARKVAVNYLETHK 197 (201)
T ss_dssp -------HHHHHHHHHHHHC---CHHHHHHHHHHHHHCC
T ss_pred -------hHHHHHHHHHhCC---CHHHHHHHHHHHHHHH
Confidence 3677888889888 9999999999987654
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.92 E-value=3.8e-08 Score=90.83 Aligned_cols=121 Identities=15% Similarity=0.194 Sum_probs=76.6
Q ss_pred hcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHH
Q psy14164 150 LEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFS 229 (361)
Q Consensus 150 L~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~ 229 (361)
++++++.||..|+++||.+...++.... .+++.|+.++.+ ++..||..|+++|+.+.. ...++
T Consensus 100 ~~d~~~~vr~~a~~aL~~l~~~~~~~~~-----~~~~~L~~~l~d-~~~~vR~~a~~aL~~~~~-----------~~~~~ 162 (280)
T 1oyz_A 100 LNDKSACVRATAIESTAQRCKKNPIYSP-----KIVEQSQITAFD-KSTNVRRATAFAISVIND-----------KATIP 162 (280)
T ss_dssp HHCSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHTTC-SCHHHHHHHHHHHHTC--------------CCHH
T ss_pred hcCCCHHHHHHHHHHHHHHhccCCcccH-----HHHHHHHHHhhC-CCHHHHHHHHHHHHhcCC-----------HHHHH
Confidence 3456666666666666666544443221 346666666664 456666666666665532 23677
Q ss_pred HHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 230 VLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 230 ~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
.|+.+|.+++..||..|++++..+....+ .+++.|+.+|.++ +..+|..++.+|..+.
T Consensus 163 ~L~~~l~d~~~~vr~~a~~aL~~~~~~~~---------~~~~~L~~~l~d~---~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 163 LLINLLKDPNGDVRNWAAFAININKYDNS---------DIRDCFVEMLQDK---NEEVRIEAIIGLSYRK 220 (280)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHTCCCH---------HHHHHHHHHTTCS---CHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhccCcH---------HHHHHHHHHhcCC---CHHHHHHHHHHHHHhC
Confidence 77777777777788888887777643222 3567777888776 7788888888887765
No 48
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=98.87 E-value=3e-07 Score=84.75 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=98.9
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
.++.|+.+|+++++.||..|+++||.+.. .+++|.|+.++.+ ++..||..|+++|+.+..+.+
T Consensus 129 ~~~~L~~~l~d~~~~vR~~a~~aL~~~~~-----------~~~~~~L~~~l~d-~~~~vr~~a~~aL~~~~~~~~----- 191 (280)
T 1oyz_A 129 IVEQSQITAFDKSTNVRRATAFAISVIND-----------KATIPLLINLLKD-PNGDVRNWAAFAININKYDNS----- 191 (280)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTC--------------CCHHHHHHHHTC-SSHHHHHHHHHHHHHHTCCCH-----
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcC-CCHHHHHHHHHHHHhhccCcH-----
Confidence 47888889999999999999999998642 2589999999986 678999999999999853332
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
..++.|+.+|.+++..+|..|++++..+.. ...++.|+.+|..+ + ++..+..+|..+.
T Consensus 192 ----~~~~~L~~~l~d~~~~vR~~A~~aL~~~~~-----------~~~~~~L~~~l~d~---~--vr~~a~~aL~~i~ 249 (280)
T 1oyz_A 192 ----DIRDCFVEMLQDKNEEVRIEAIIGLSYRKD-----------KRVLSVLCDELKKN---T--VYDDIIEAAGELG 249 (280)
T ss_dssp ----HHHHHHHHHTTCSCHHHHHHHHHHHHHTTC-----------GGGHHHHHHHHTSS---S--CCHHHHHHHHHHC
T ss_pred ----HHHHHHHHHhcCCCHHHHHHHHHHHHHhCC-----------HhhHHHHHHHhcCc---c--HHHHHHHHHHhcC
Confidence 346788999999999999999999998752 35788999999865 4 8888888888774
No 49
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.66 E-value=4.3e-08 Score=104.58 Aligned_cols=174 Identities=12% Similarity=0.092 Sum_probs=124.4
Q ss_pred HHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCC
Q psy14164 117 CIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDS 196 (361)
Q Consensus 117 ~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~ 196 (361)
+..|...|..++.... ..+.. ..++.+..+|.+++..+|..|+++||+++.+.+..-.. .-.+++|.|+.++.+ +
T Consensus 338 r~~a~~~L~~la~~~~--~~~~~-~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~-~l~~~l~~l~~~l~d-~ 412 (852)
T 4fdd_A 338 RKCSAAALDVLANVYR--DELLP-HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIP-YLPELIPHLIQCLSD-K 412 (852)
T ss_dssp HHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGG-GHHHHHHHHHHHTTC-S
T ss_pred HHHHHHHHHHHHHhcc--HHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHH-HHHHHHHHHHHHcCC-C
Confidence 5566666666654332 11111 24677777889999999999999999999887653322 224688999999985 6
Q ss_pred CHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHH
Q psy14164 197 NTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCV 275 (361)
Q Consensus 197 ~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~ 275 (361)
+..||..|+|+|++++...+......+-.+.++.|+..|.+++.++|..|++++.+++.. ++....++ .++++.|+.
T Consensus 413 ~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~~~~l~~~l--~~ll~~L~~ 490 (852)
T 4fdd_A 413 KALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL--AYILDTLVF 490 (852)
T ss_dssp SHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGGGGGH--HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhHhhHhHH--HHHHHHHHH
Confidence 789999999999999874322111111235678889999889999999999999999865 23333333 367888888
Q ss_pred hccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 276 LIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 276 lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
++... +......++.++..++.
T Consensus 491 ~l~~~---~~~~~~~~~~ai~~l~~ 512 (852)
T 4fdd_A 491 AFSKY---QHKNLLILYDAIGTLAD 512 (852)
T ss_dssp HHHHC---CHHHHHHHHHHHHHHHH
T ss_pred HHHHh---ChHHHHHHHHHHHHHHH
Confidence 88876 66666777888888764
No 50
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.66 E-value=3.3e-07 Score=94.31 Aligned_cols=213 Identities=15% Similarity=0.140 Sum_probs=145.2
Q ss_pred HHhHHHHHHHHHhhcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHH
Q psy14164 79 EANRGFLLDALNSMMVNVGAELEKIIKTLKENQ--DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPE 156 (361)
Q Consensus 79 ~e~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~--~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~ 156 (361)
.+-|+..--++..+.....+.+.-++..+...- .+...+..|+..|..+. ..+....+ ++.+.++|.++++.
T Consensus 63 ~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~-~~~~~~~l-----~~~l~~~L~d~~~~ 136 (591)
T 2vgl_B 63 LELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR-VDKITEYL-----CEPLRKCLKDEDPY 136 (591)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC-SGGGHHHH-----HHHHHHHSSCSCHH
T ss_pred HHHHHHHHHHHHHHcccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC-hHHHHHHH-----HHHHHHHcCCCChH
Confidence 344554444555554222333333344443222 23466777777776654 33333333 57789999999999
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhh---------HHHHHh---
Q psy14164 157 LRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEEC---------LKEFIK--- 224 (361)
Q Consensus 157 vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~---------~~~f~~--- 224 (361)
||..|+++++.+...+|..- -+.++++.|..+|. ++++.|+..|+++|+.++.+++.. ...++.
T Consensus 137 VRk~A~~al~~i~~~~p~~~---~~~~~~~~l~~lL~-d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~ 212 (591)
T 2vgl_B 137 VRKTAAVCVAKLHDINAQMV---EDQGFLDSLRDLIA-DSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALN 212 (591)
T ss_dssp HHHHHHHHHHHHHHSSCCCH---HHHHHHHHHHHTTS-CSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhChhhc---ccccHHHHHHHHhC-CCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCC
Confidence 99999999999999887632 33578999999998 478899999999999999876521 222221
Q ss_pred -------------------------hCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC---CchHHHHHHhCCcHHHHHHh
Q psy14164 225 -------------------------RDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD---NNQVKQVLLSMGMVEQMCVL 276 (361)
Q Consensus 225 -------------------------~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~---~~~~~~~l~~~g~i~~Lv~l 276 (361)
...++.+..+|++.+..|+..|++++.++... +++..+.+. ..+.+.|+.+
T Consensus 213 ~~~~~~q~~il~~l~~l~~~~~~~~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~~~~~~~~~~~~~~-~~~~~~L~~L 291 (591)
T 2vgl_B 213 ECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLL-KKLAPPLVTL 291 (591)
T ss_dssp HCCHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHH-HHTHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhhccCCCHHHHHHHH-HHHHHHHHHH
Confidence 12355666667788999999999999998742 334433332 3456778877
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHhcChHHH
Q psy14164 277 IDIEDALDTEMNEHLLSALASLIKDSPEAQ 306 (361)
Q Consensus 277 L~~~~~~d~~~~e~al~aL~~L~~~~~~~~ 306 (361)
+. + ++.+|-.++.+|..++...|+.+
T Consensus 292 ~~-~---d~~vr~~aL~~l~~i~~~~p~~~ 317 (591)
T 2vgl_B 292 LS-G---EPEVQYVALRNINLIVQKRPEIL 317 (591)
T ss_dssp TT-S---CHHHHHHHHHHHHHHHHHCCSTT
T ss_pred hc-C---CccHHHHHHHHHHHHHHhChHHH
Confidence 65 6 89999999999999998766543
No 51
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.64 E-value=1.4e-07 Score=100.54 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHHHhhcCcccHHHHHHC--CCHHHHHHhh-----------cC-----------CCHHHHHHHHHHHHH
Q psy14164 112 DQKDICIGALDNLSDYICSIDYANDFLKM--GGLPVLQPLL-----------EG-----------SDPELRWRAAETVAD 167 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~idna~~~~~~--Gg~~~Lv~LL-----------~s-----------~~~~vr~~Aa~~Lg~ 167 (361)
.+++.+..|++-+..+++.....+.+... ..+|.++..+ .. ++..+|..|+.+|+.
T Consensus 268 ~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~ 347 (852)
T 4fdd_A 268 QDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDV 347 (852)
T ss_dssp SSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHH
Confidence 34678899998888888654322222110 2255556655 22 233589999999999
Q ss_pred HhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHH
Q psy14164 168 IVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSC 247 (361)
Q Consensus 168 iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~ 247 (361)
++...+. .++. .++|.+..++.+ ++..+|..|+++|++++.+.......++ ...++.|+.+|++++..||..|+
T Consensus 348 la~~~~~---~~~~-~l~~~l~~~l~~-~~~~~R~aa~~alg~i~~~~~~~~~~~l-~~~l~~l~~~l~d~~~~Vr~~a~ 421 (852)
T 4fdd_A 348 LANVYRD---ELLP-HILPLLKELLFH-HEWVVKESGILVLGAIAEGCMQGMIPYL-PELIPHLIQCLSDKKALVRSITC 421 (852)
T ss_dssp HHHHHGG---GGHH-HHHHHHHHHHTC-SSHHHHHHHHHHHHHTTTTTHHHHGGGH-HHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHhccH---HHHH-HHHHHHHHHhcC-CCHHHHHHHHHHHHHHHhcchHHHHHHH-HHHHHHHHHHcCCCCHHHHHHHH
Confidence 9976542 2222 467888888876 5789999999999999998776544333 56789999999999999999999
Q ss_pred HHHHHHhcCCch--HHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 248 FLIACLCTDNNQ--VKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 248 ~ll~~L~~~~~~--~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
|++..++...+. ...++ .++++.|+..|..+ +..+++.|+.+|.+++..+.
T Consensus 422 ~~l~~l~~~~~~~~~~~~~--~~ll~~L~~~L~d~---~~~vr~~a~~aL~~l~~~~~ 474 (852)
T 4fdd_A 422 WTLSRYAHWVVSQPPDTYL--KPLMTELLKRILDS---NKRVQEAACSAFATLEEEAC 474 (852)
T ss_dssp HHHHHTHHHHHHSCTTTTH--HHHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhccchHHHHH--HHHHHHHHHHHhCC---CHHHHHHHHHHHHHHHHHhh
Confidence 999998863111 11111 25788889999877 89999999999999987554
No 52
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.60 E-value=3.2e-09 Score=87.59 Aligned_cols=120 Identities=9% Similarity=0.099 Sum_probs=90.8
Q ss_pred CCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhH
Q psy14164 140 MGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECL 219 (361)
Q Consensus 140 ~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~ 219 (361)
-..++.|+.+|+++++.+|..|+++|+.+.. ..++.|+.+|.+ ++..||..|+++|+.+.. +
T Consensus 11 ~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~------------~~~~~L~~~L~d-~~~~vR~~A~~aL~~~~~--~--- 72 (131)
T 1te4_A 11 SSGLVPRGSHMADENKWVRRDVSTALSRMGD------------EAFEPLLESLSN-EDWRIRGAAAWIIGNFQD--E--- 72 (131)
T ss_dssp ----------CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGC-SCHHHHHHHHHHHGGGCS--H---
T ss_pred cccHHHHHHHhcCCCHHHHHHHHHHHHHhCc------------hHHHHHHHHHcC-CCHHHHHHHHHHHHhcCC--H---
Confidence 3567889999999999999999999997632 126889999985 788999999999998742 1
Q ss_pred HHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHH
Q psy14164 220 KEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALAS 297 (361)
Q Consensus 220 ~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~ 297 (361)
..++.|+.+|.+++..||..|++++..+.. ...++.|+.+|+++ +..++..|..+|..
T Consensus 73 ------~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~-----------~~a~~~L~~~l~d~---~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 73 ------RAVEPLIKLLEDDSGFVRSGAARSLEQIGG-----------ERVRAAMEKLAETG---TGFARKVAVNYLET 130 (131)
T ss_dssp ------HHHHHHHHHHHHCCTHHHHHHHHHHHHHCS-----------HHHHHHHHHHTTSC---CTHHHHHHHHHGGG
T ss_pred ------HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-----------HHHHHHHHHHHhCC---CHHHHHHHHHHHHh
Confidence 247888999999999999999999998742 13578899999877 88999999988754
No 53
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.58 E-value=1.3e-06 Score=89.75 Aligned_cols=167 Identities=13% Similarity=0.167 Sum_probs=129.8
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhh
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSI 192 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL 192 (361)
+.+.|..++..+.++.-..... ..+++.+++++.+++..+|..+...+..++..+|+... -+++.|.+-|
T Consensus 26 ~~~~k~~~~~kli~~~~~G~d~-----~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~e~~~-----l~~n~l~kdL 95 (591)
T 2vgl_B 26 KKEKRKEAVKKVIAAMTVGKDV-----SSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI-----MAVNSFVKDC 95 (591)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCC-----GGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHHH-----TTHHHHGGGS
T ss_pred CHHHHHHHHHHHHHHHHCCCCh-----HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccCchHHH-----HHHHHHHHHc
Confidence 4567777777777654322211 13678889999999999999999999999887665432 2467777888
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHH
Q psy14164 193 EHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQ 272 (361)
Q Consensus 193 ~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~ 272 (361)
.+ +++.+|..|+.+|+++. .+..... .++.+..+|.++++.||++|++++..+...+|+... +.++++.
T Consensus 96 ~~-~n~~ir~~AL~~L~~i~--~~~~~~~-----l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~---~~~~~~~ 164 (591)
T 2vgl_B 96 ED-PNPLIRALAVRTMGCIR--VDKITEY-----LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVE---DQGFLDS 164 (591)
T ss_dssp SS-SSHHHHHHHHHHHHTCC--SGGGHHH-----HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHH---HHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHcCC--hHHHHHH-----HHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcc---cccHHHH
Confidence 86 68899999999999984 3443333 357788999999999999999999999987765432 3478899
Q ss_pred HHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 273 MCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 273 Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
+..+|.++ ++.++..|+.+|..+....+
T Consensus 165 l~~lL~d~---d~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 165 LRDLIADS---NPMVVANAVAALSEISESHP 192 (591)
T ss_dssp HHHTTSCS---CHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHhCCC---ChhHHHHHHHHHHHHHhhCC
Confidence 99999987 99999999999999998765
No 54
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.58 E-value=9.7e-07 Score=88.83 Aligned_cols=175 Identities=14% Similarity=0.184 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHh
Q psy14164 112 DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTS 191 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~L 191 (361)
.+...+..|+..|..+++...... .....+|.+..++++++..+|..|+.+|+.++...+.. .....++|.+..+
T Consensus 176 ~~~~VR~~a~~~l~~l~~~~~~~~--~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~ 250 (588)
T 1b3u_A 176 DTPMVRRAAASKLGEFAKVLELDN--VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE---DLEALVMPTLRQA 250 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHHH--HHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHH---HHHHHTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcHHh--HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHH
Confidence 456788888888888887654322 12345788888999999999999999999998765431 1223478888888
Q ss_pred hccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCC-chHHHHHHhCCcH
Q psy14164 192 IEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDN-NQVKQVLLSMGMV 270 (361)
Q Consensus 192 L~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~-~~~~~~l~~~g~i 270 (361)
+.+ ++..+|..|+.+|+.++....+ .......++.+..++++++..+|..|++++..++..- +..+....-..++
T Consensus 251 ~~d-~~~~vR~~a~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~ 326 (588)
T 1b3u_A 251 AED-KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQIL 326 (588)
T ss_dssp HTC-SSHHHHHHHHHTHHHHHHHHCH---HHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHH
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHhCc---ccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHH
Confidence 875 6789999999999999874322 1233456889999999999999999999999998752 2211111112344
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHH
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASL 298 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L 298 (361)
+.+..++.++ +..+|..++.+|..+
T Consensus 327 p~l~~~l~d~---~~~vR~~a~~~l~~l 351 (588)
T 1b3u_A 327 PCIKELVSDA---NQHVKSALASVIMGL 351 (588)
T ss_dssp HHHHHHHTCS---CHHHHHHHHTTGGGG
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHH
Confidence 5555555544 555555554444433
No 55
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.57 E-value=2.6e-06 Score=88.14 Aligned_cols=177 Identities=15% Similarity=0.137 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhc
Q psy14164 114 KDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIE 193 (361)
Q Consensus 114 ~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~ 193 (361)
+-.+..|+..|..+.. .+.+. ..++.+.++|.++++.||..|+.+++++...+|..- .+.++.+..+|.
T Consensus 121 ~~vr~lAL~~L~~i~~-~~~~~-----~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v-----~~~~~~l~~lL~ 189 (618)
T 1w63_A 121 QFVQGLALCTLGCMGS-SEMCR-----DLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNLLN 189 (618)
T ss_dssp SHHHHHHHHHHHHHCC-HHHHH-----HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGG-----GGGGGGTTTSTT
T ss_pred HhHHHHHHHHHHhcCC-HHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHH-----HHHHHHHHHHhC
Confidence 3455666666666542 22221 236788889999999999999999999999888532 267888888887
Q ss_pred cCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhcc---------------CCHHHHHHHHHHHHHHhcCCc
Q psy14164 194 HDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS---------------KKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 194 ~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s---------------~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+ .++.|+..|+++|+.++..++.....|. .-++.|+..|.. .++-+|.++..++..++..++
T Consensus 190 D-~d~~V~~~Al~~L~~i~~~~~~~~~~~~--~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~~~ 266 (618)
T 1w63_A 190 E-KNHGVLHTSVVLLTEMCERSPDMLAHFR--KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDD 266 (618)
T ss_dssp C-CCHHHHHHHHHHHHHHCCSHHHHHHHHH--TTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTTCH
T ss_pred C-CCHhHHHHHHHHHHHHHHhChHHHHHHH--HHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCCCH
Confidence 4 7889999999999999887655333343 445666655542 367777777777777766543
Q ss_pred hHHH-------HHH----------------------h--------CCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 259 QVKQ-------VLL----------------------S--------MGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 259 ~~~~-------~l~----------------------~--------~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
.... .+. . ..++..|..+|.+. ++.+|..++.+|..++..
T Consensus 267 ~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~~l~~~~~l~~~a~~~L~~~L~~~---d~~vr~~aL~~L~~i~~~ 343 (618)
T 1w63_A 267 DSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNN---DKNIRYVALTSLLKTVQT 343 (618)
T ss_dssp HHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCS---STTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCC---CCchHHHHHHHHHHHHhh
Confidence 3111 000 0 13567888888887 899999999999999988
Q ss_pred ChHHHH
Q psy14164 302 SPEAQS 307 (361)
Q Consensus 302 ~~~~~~ 307 (361)
.|..+.
T Consensus 344 ~p~~~~ 349 (618)
T 1w63_A 344 DHNAVQ 349 (618)
T ss_dssp HHHHHG
T ss_pred CHHHHH
Confidence 776543
No 56
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.57 E-value=7.3e-06 Score=84.74 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=117.9
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
.+..|.+-|+++++.+|..|+++||++. ++..- ..+++.+.++|.+ +++.||++|+.|+..+.+.+|....
T Consensus 108 ~in~l~kDL~~~n~~vr~lAL~~L~~i~--~~~~~-----~~l~~~l~~~L~~-~~~~VRk~A~~al~~l~~~~p~~v~- 178 (618)
T 1w63_A 108 MTNCIKNDLNHSTQFVQGLALCTLGCMG--SSEMC-----RDLAGEVEKLLKT-SNSYLRKKAALCAVHVIRKVPELME- 178 (618)
T ss_dssp HHHHHHHHHSCSSSHHHHHHHHHHHHHC--CHHHH-----HHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHCGGGGG-
T ss_pred HHHHHHHhcCCCCHhHHHHHHHHHHhcC--CHHHH-----HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHChHHHH-
Confidence 4677888899999999999999999997 34322 2468889999986 6889999999999999998886543
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCC------------CCCChhHHH
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIE------------DALDTEMNE 289 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~------------~~~d~~~~e 289 (361)
+.++.+..+|.+.+..|+..|++++..++..+++....+. .+++.++.+|..- ...++-.+.
T Consensus 179 ----~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~--~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~ 252 (618)
T 1w63_A 179 ----MFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFR--KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQV 252 (618)
T ss_dssp ----GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHH--TTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHH
T ss_pred ----HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHH--HHHHHHHHHHHHHHcCCCCccccccCCCCChHHH
Confidence 4567788889999999999999999999887665444443 5788888877530 011677888
Q ss_pred HHHHHHHHHHhcChHH
Q psy14164 290 HLLSALASLIKDSPEA 305 (361)
Q Consensus 290 ~al~aL~~L~~~~~~~ 305 (361)
.++.+|..+....|..
T Consensus 253 ~il~~L~~l~~~~~~~ 268 (618)
T 1w63_A 253 RILRLLRILGRNDDDS 268 (618)
T ss_dssp HHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHhCCCCHHH
Confidence 9999999998877653
No 57
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=98.57 E-value=8e-06 Score=77.69 Aligned_cols=193 Identities=15% Similarity=0.179 Sum_probs=147.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcC
Q psy14164 94 VNVGAELEKIIKTLKENQDQKDICIGALDNLSD-YICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNN 172 (361)
Q Consensus 94 ~~~~~~mk~~l~~L~~~~~~~~~~~~Al~~L~~-lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn 172 (361)
..+..+..++++.|.+ .+.+++..+|-.|.. +.++.+.+..|+..+|+..|+....+.+...+..++++++++.-..
T Consensus 114 tsps~ra~~iiekL~~--~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v 191 (339)
T 3dad_A 114 TQLSVRVNAILEKLYS--SSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFV 191 (339)
T ss_dssp ECHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSH
T ss_pred cCcHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhcc
Confidence 4667777888888886 456789999999999 5578999999999999999999999999999999999999998653
Q ss_pred HHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhh-------Cc---HHHHHHhhc---cCC
Q psy14164 173 PFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKR-------DG---FSVLLRCIQ---SKK 239 (361)
Q Consensus 173 ~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~-------gg---i~~Lv~lL~---s~~ 239 (361)
......+-....+..|..++.+ .+..|.+.|+..|-++|-..+.....+.+. .| ++.|+.+|+ +.+
T Consensus 192 ~Gm~gvvs~~~fI~~lyslv~s-~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D 270 (339)
T 3dad_A 192 DGMLGVVAHSDTIQWLYTLCAS-LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGAD 270 (339)
T ss_dssp HHHHHHHHCHHHHHHHHHGGGC-SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCC
T ss_pred ccccchhCCHHHHHHHHHHHcC-ccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCC
Confidence 3333333345678889999986 678999999999999988766554444432 23 889999998 779
Q ss_pred HHHHHHHHHHHHHHhcCCch------HHHHHHhCCcHHHHHHhccCCCCCChhHHHH
Q psy14164 240 EKLVIKSCFLIACLCTDNNQ------VKQVLLSMGMVEQMCVLIDIEDALDTEMNEH 290 (361)
Q Consensus 240 ~~v~~kA~~ll~~L~~~~~~------~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~ 290 (361)
..++.+|..+|..++..-++ ....+-+.|+=..+..+|++. ..+.+++++
T Consensus 271 ~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r~l~~~-~~~~~l~~Q 326 (339)
T 3dad_A 271 PELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTA-GTDVDLRTQ 326 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHHHHSCT-TSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHHHHhcc-CCCHHHHHH
Confidence 99999999999999887442 334455666655666666553 114455444
No 58
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.54 E-value=1.4e-06 Score=78.89 Aligned_cols=174 Identities=14% Similarity=0.168 Sum_probs=130.6
Q ss_pred CCHHHHHHHHHHHHHhhcC-ccc-HHHHHHCCCHHHHHHhhc-CCCHHHHHHHHHHHHHHhhcCH-HHHHHHHhcChHHH
Q psy14164 112 DQKDICIGALDNLSDYICS-IDY-ANDFLKMGGLPVLQPLLE-GSDPELRWRAAETVADIVQNNP-FSQNFIIQTDFLNL 187 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~-idn-a~~~~~~Gg~~~Lv~LL~-s~~~~vr~~Aa~~Lg~iaqnn~-~~q~~v~~~g~l~~ 187 (361)
.+-..|..|+..|..+++. .+. ..++.+ .++.|..+|. .++..||..|+.+|+.++..-. .....+ ..++|.
T Consensus 27 ~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~--i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~--~~ilp~ 102 (242)
T 2qk2_A 27 KKWTLRKESLEVLEKLLTDHPKLENGEYGA--LVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYA--SACVPS 102 (242)
T ss_dssp SSHHHHHHHHHHHHHHHHHCSSBCCCCCHH--HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHH--HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHccCCCCCCCCHHH--HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHH--HHHHHH
Confidence 4557888999999888864 111 112222 2667788884 8999999999999999996421 222222 238999
Q ss_pred HHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-Cch--HHHHH
Q psy14164 188 LLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQ--VKQVL 264 (361)
Q Consensus 188 Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~--~~~~l 264 (361)
|+..+.+ ++..||..|..||.+++...+ ... .++.|...|++.+.++|..++.+|..++.. ++. ....+
T Consensus 103 ll~~l~d-~~~~vr~~a~~aL~~~~~~~~--~~~-----ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l 174 (242)
T 2qk2_A 103 LLEKFKE-KKPNVVTALREAIDAIYASTS--LEA-----QQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL 174 (242)
T ss_dssp HHHGGGC-CCHHHHHHHHHHHHHHHTTSC--HHH-----HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHH
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHHHHcCC--HHH-----HHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHH
Confidence 9999985 678999999999999987543 222 457788889999999999999999997655 343 23333
Q ss_pred HhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 265 LSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 265 ~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
- .+++.|+.+|... +..+|..|..++..+...-
T Consensus 175 ~--~l~p~l~~~l~D~---~~~VR~~A~~~l~~l~~~v 207 (242)
T 2qk2_A 175 K--LLTTSLVKTLNEP---DPTVRDSSAEALGTLIKLM 207 (242)
T ss_dssp H--HHHHHHHHHHTSS---CHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHhcCC---ChHHHHHHHHHHHHHHHHc
Confidence 2 6899999999888 9999999999999988543
No 59
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=98.47 E-value=1.4e-06 Score=80.01 Aligned_cols=181 Identities=13% Similarity=0.137 Sum_probs=130.6
Q ss_pred CCHHHHHHHHHHHHH-hhcC-ccc---HHHHHHCCCHHHHHHhh-cCCCHHHHHHHHHHHHHHhhcC--HHHH-HHHHhc
Q psy14164 112 DQKDICIGALDNLSD-YICS-IDY---ANDFLKMGGLPVLQPLL-EGSDPELRWRAAETVADIVQNN--PFSQ-NFIIQT 182 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~-lve~-idn---a~~~~~~Gg~~~Lv~LL-~s~~~~vr~~Aa~~Lg~iaqnn--~~~q-~~v~~~ 182 (361)
..-.+|..|++.|.. +++. .+. ..++.. .+..|.+.| +.++..||..|+.+|+.++.+- +..+ .+..
T Consensus 28 ~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~--~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~-- 103 (249)
T 2qk1_A 28 SKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSN--LLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYVS-- 103 (249)
T ss_dssp SSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHH--HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHH--
T ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCcccHHH--HHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHHH--
Confidence 445788899999998 8753 111 112222 266777788 7889999999999999999642 2333 3332
Q ss_pred ChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc---h
Q psy14164 183 DFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN---Q 259 (361)
Q Consensus 183 g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~---~ 259 (361)
-++|.++..+.+ ....|+..+..|+-+++...++....-.-...++.|...|++++..+|..++.+|..++...+ .
T Consensus 104 ~llp~ll~~l~d-kk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~ 182 (249)
T 2qk1_A 104 LVFTPLLDRTKE-KKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYS 182 (249)
T ss_dssp HHHHHHHHGGGC-CCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSH
T ss_pred HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcch
Confidence 279999999985 667999999999999988553211000001246778889999999999999999999887644 2
Q ss_pred HHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 260 VKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 260 ~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
.....+...+++.|+.+|..+ +..+|+.|..++..+..
T Consensus 183 ~l~~~l~~~iip~l~~~l~D~---~~~VR~aA~~~l~~i~~ 220 (249)
T 2qk1_A 183 TLQRYLKDEVVPIVIQIVNDT---QPAIRTIGFESFAILIK 220 (249)
T ss_dssp HHHHHHTTTHHHHHHHHHTCS---SHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHH
Confidence 222233357899999999888 99999999999998874
No 60
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.42 E-value=1.4e-05 Score=80.36 Aligned_cols=186 Identities=11% Similarity=0.076 Sum_probs=105.9
Q ss_pred HHHHHHHHhcCC-CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14164 100 LEKIIKTLKENQ-DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNF 178 (361)
Q Consensus 100 mk~~l~~L~~~~-~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~ 178 (361)
.++.+..|.... ++.+.+..+...|..+++.++.... ....++.|..++.+++..||..|+.+|++++...+..+
T Consensus 47 ~~~l~~~L~~~~d~~~~vr~~~~~~L~~~~~~~~~~~~--~~~ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~~~-- 122 (588)
T 1b3u_A 47 RSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEY--VHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSD-- 122 (588)
T ss_dssp HHTHHHHHHHTCCCCHHHHHHHHHHHTTCSGGGTSGGG--GGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHH--
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhccCcHHH--HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHCCHHH--
Confidence 344455554322 3456777777777776654322211 12245666677788899999999999999988765421
Q ss_pred HHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 179 IIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 179 v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
+..-.+|.+..+..+ .+..+|..|+..|+.++.+.+... ....++.+..++++++..||..|+.++..++...+
T Consensus 123 -~~~~l~~~l~~l~~~-~~~~~R~~a~~~l~~~~~~~~~~~----~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~ 196 (588)
T 1b3u_A 123 -LEAHFVPLVKRLAGG-DWFTSRTSACGLFSVCYPRVSSAV----KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLE 196 (588)
T ss_dssp -HHHTHHHHHHHHHTC-SSHHHHHHHGGGHHHHTTTSCHHH----HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSC
T ss_pred -HHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHhcCHHH----HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc
Confidence 222345555555543 355666666666666665443221 12335555566666666677666666666665422
Q ss_pred hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 259 QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 259 ~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
.. .....+++.+..++..+ +..+|..|+.+|..++..
T Consensus 197 ~~---~~~~~l~~~l~~~~~d~---~~~vr~~a~~~l~~l~~~ 233 (588)
T 1b3u_A 197 LD---NVKSEIIPMFSNLASDE---QDSVRLLAVEACVNIAQL 233 (588)
T ss_dssp HH---HHHHTHHHHHHHHHTCS---CHHHHTTHHHHHHHHHHH
T ss_pred HH---hHHHHHHHHHHHHhcCC---cHHHHHHHHHHHHHHHHh
Confidence 10 11224455555555555 556666666666555543
No 61
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.41 E-value=7.6e-06 Score=86.27 Aligned_cols=180 Identities=12% Similarity=0.180 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCH-HHHHHHHhcChHHHHHHhhc
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNP-FSQNFIIQTDFLNLLLTSIE 193 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~-~~q~~v~~~g~l~~Ll~LL~ 193 (361)
..+..|...|..++.... ..+.. ..++.+...|++++..+|..|++++|.++.+.. ..-...+. .++|.|+..+.
T Consensus 346 ~~r~~a~~~L~~l~~~~~--~~~~~-~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~~l~ 421 (861)
T 2bpt_A 346 NVSMSAGACLQLFAQNCG--NHILE-PVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMN 421 (861)
T ss_dssp HHHHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGG
T ss_pred cHHHHHHHHHHHHHHHcc--HhHHH-HHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHcC
Confidence 456667777766664332 11111 135556667788999999999999999997642 32222232 47888999987
Q ss_pred cCCCHHHHHHHHHHHHHHhcCChhhH--HHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-C----chHHHHHHh
Q psy14164 194 HDSNTTVQVKSLYAVSCLVRENEECL--KEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-N----NQVKQVLLS 266 (361)
Q Consensus 194 ~~~~~~v~~~Al~ALS~l~r~~~~~~--~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~----~~~~~~l~~ 266 (361)
+ +++.+|..++|+|+.++....+.. ..++ ...++.|+..|+++ .+++..|++++.+++.. . .....++
T Consensus 422 d-~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~-~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~~-- 496 (861)
T 2bpt_A 422 D-QSLQVKETTAWCIGRIADSVAESIDPQQHL-PGVVQACLIGLQDH-PKVATNCSWTIINLVEQLAEATPSPIYNFY-- 496 (861)
T ss_dssp C-SCHHHHHHHHHHHHHHHHHHGGGSCTTTTH-HHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGGH--
T ss_pred C-CcHHHHHHHHHHHHHHHHHhhhhcCCHHHH-HHHHHHHHHHhccC-hHHHHHHHHHHHHHHHhcccccchhhHHHH--
Confidence 5 678999999999999987532210 1111 24577888888776 99999999999999864 1 2222232
Q ss_pred CCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChH
Q psy14164 267 MGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPE 304 (361)
Q Consensus 267 ~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~ 304 (361)
..+++.|+.++... ..+..+|..++.+|..++...+.
T Consensus 497 ~~il~~L~~~l~~~-d~~~~vr~~a~~al~~l~~~~~~ 533 (861)
T 2bpt_A 497 PALVDGLIGAANRI-DNEFNARASAFSALTTMVEYATD 533 (861)
T ss_dssp HHHHHHHHHHHTCS-CCGGGHHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHHHhCc-CcchHHHHHHHHHHHHHHHHcch
Confidence 24578888888754 11378999999999999987653
No 62
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.34 E-value=2.4e-05 Score=76.06 Aligned_cols=156 Identities=8% Similarity=0.079 Sum_probs=109.9
Q ss_pred CHHHHHHhhcCC--CHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHHHHHhhccCC-CHHHHHHHHHHHHHHhcCChh
Q psy14164 142 GLPVLQPLLEGS--DPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNLLLTSIEHDS-NTTVQVKSLYAVSCLVRENEE 217 (361)
Q Consensus 142 g~~~Lv~LL~s~--~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~Ll~LL~~~~-~~~v~~~Al~ALS~l~r~~~~ 217 (361)
.++.|+.++.++ ++.+|..|+.+++.++... +..-.... ..+++.++.+|.+.. +..||..|+.++++++.....
T Consensus 129 ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~ 207 (462)
T 1ibr_B 129 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 207 (462)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345667778888 8999999999999999754 32211111 247888999998743 689999999999997653322
Q ss_pred hHHHH-HhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHH
Q psy14164 218 CLKEF-IKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALA 296 (361)
Q Consensus 218 ~~~~f-~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~ 296 (361)
..... ...-.++.|...+.+++..+|..++.++..++...+......+..++++.++..+... +..++..++..+.
T Consensus 208 ~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~v~~~a~~~l~ 284 (462)
T 1ibr_B 208 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD---IDEVALQGIEFWS 284 (462)
T ss_dssp HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCS---SHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHH
Confidence 21100 0111356667778888999999999999999876543322222226777888888877 8999999999988
Q ss_pred HHHhc
Q psy14164 297 SLIKD 301 (361)
Q Consensus 297 ~L~~~ 301 (361)
.++..
T Consensus 285 ~~~~~ 289 (462)
T 1ibr_B 285 NVCDE 289 (462)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 63
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.33 E-value=1.9e-05 Score=71.42 Aligned_cols=173 Identities=12% Similarity=0.156 Sum_probs=137.7
Q ss_pred CCHHHHHHHHHHHHHhhcCcccHHHHH-HCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHH
Q psy14164 112 DQKDICIGALDNLSDYICSIDYANDFL-KMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLT 190 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~idna~~~~-~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~ 190 (361)
.+...+..+|..|++++...|-.-... --..++.++.++.+.+..|--.|.+||+++..+.|-.-+.+.+ ++..|..
T Consensus 45 kD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y~K--l~~aL~d 122 (265)
T 3b2a_A 45 DDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTFLK--AAKTLVS 122 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHHHH--HHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHHHH--HHHHHHH
Confidence 556889999999999998754433322 2246999999999999999999999999999999887777755 6788888
Q ss_pred hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC--CchHHHHHHhCC
Q psy14164 191 SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD--NNQVKQVLLSMG 268 (361)
Q Consensus 191 LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~--~~~~~~~l~~~g 268 (361)
++.+ ++.-++..|+-.++.+ +-.... ...+..|.+++.|++.++|.-+..++.+++.. +++.. .+
T Consensus 123 lik~-~~~il~~eaae~Lgkl-kv~~~~------~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~-----~~ 189 (265)
T 3b2a_A 123 LLES-PDDMMRIETIDVLSKL-QPLEDS------KLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHL-----TL 189 (265)
T ss_dssp HTTS-CCHHHHHHHHHHHHHC-CBSCCC------HHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCG-----GG
T ss_pred HhcC-CCchHHHHHHHHhCcC-Ccccch------HHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHH-----HH
Confidence 8885 7889999999999998 211111 23456778899999999999999999999874 33333 24
Q ss_pred cHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 269 MVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 269 ~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
++.-+-.+|++. |+.+++.|+.+|..+++..
T Consensus 190 I~~eI~elL~~e---D~~l~e~aLd~Le~ils~p 220 (265)
T 3b2a_A 190 ILDEIPSLLQND---NEFIVELALDVLEKALSFP 220 (265)
T ss_dssp TTTTHHHHHTCS---CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCc
Confidence 566677889998 9999999999999999764
No 64
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=98.31 E-value=6.5e-07 Score=73.54 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=74.3
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
.++.|+.+|+++++.||..|+++||++.. + .+++.|+.+|.+ ++..||..|+++|+.+. .
T Consensus 43 ~~~~L~~~L~d~~~~vR~~A~~aL~~~~~--~---------~a~~~L~~~L~d-~~~~VR~~A~~aL~~~~--~------ 102 (131)
T 1te4_A 43 AFEPLLESLSNEDWRIRGAAAWIIGNFQD--E---------RAVEPLIKLLED-DSGFVRSGAARSLEQIG--G------ 102 (131)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGGCS--H---------HHHHHHHHHHHH-CCTHHHHHHHHHHHHHC--S------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--H---------HHHHHHHHHHcC-CCHHHHHHHHHHHHHhC--c------
Confidence 37899999999999999999999998752 2 358999999985 67799999999999984 1
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHH
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIAC 252 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~ 252 (361)
...++.|+.+|++++..||..|+++|..
T Consensus 103 ---~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 103 ---ERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp ---HHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred ---HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 2357888999999999999999988764
No 65
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.30 E-value=8.9e-06 Score=79.19 Aligned_cols=182 Identities=8% Similarity=0.121 Sum_probs=128.3
Q ss_pred CHHHHHHHHHHHHHhhcCcccH-HHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHH--------------
Q psy14164 113 QKDICIGALDNLSDYICSIDYA-NDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQN-------------- 177 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna-~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~-------------- 177 (361)
+.+.+..+++.|..+++..... ..+...+.++.++.++.+.+..+|..|++.+++++........
T Consensus 230 ~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (462)
T 1ibr_B 230 DTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEH 309 (462)
T ss_dssp SHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccc
Confidence 4566777888887776532210 0111114567778888899999999999999999865311100
Q ss_pred ---HHHh---cChHHHHHHhhccC------CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHH
Q psy14164 178 ---FIIQ---TDFLNLLLTSIEHD------SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIK 245 (361)
Q Consensus 178 ---~v~~---~g~l~~Ll~LL~~~------~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~k 245 (361)
.+++ ..++|.|++.+... .+..+|..|+.+|+.++...+. .++ ...++.+...|.+++.++|..
T Consensus 310 ~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~---~~~-~~~~~~l~~~l~~~~~~~r~a 385 (462)
T 1ibr_B 310 TSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED---DIV-PHVLPFIKEHIKNPDWRYRDA 385 (462)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTT---THH-HHHHHHHHHHTTCSSHHHHHH
T ss_pred hhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccH---HHH-HHHHHHHHHHhcCCChHHHHH
Confidence 0111 23677787777531 2237999999999999886553 222 346788888999999999999
Q ss_pred HHHHHHHHhcCCc-h-HHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 246 SCFLIACLCTDNN-Q-VKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 246 A~~ll~~L~~~~~-~-~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
|++++..++.+.. + ....+ ..+++.++.+|.++ +..+|..|+++|..++...+
T Consensus 386 al~~l~~l~~~~~~~~~~~~l--~~~~~~l~~~l~d~---~~~Vr~~a~~~l~~~~~~~~ 440 (462)
T 1ibr_B 386 AVMAFGCILEGPEPSQLKPLV--IQAMPTLIELMKDP---SVVVRDTAAWTVGRICELLP 440 (462)
T ss_dssp HHHHHHHTSSSSCTTTTCTTT--TTHHHHHHHGGGCS---CHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcCCcHHHHHHHH--HHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHhcc
Confidence 9999999997632 2 12222 46899999999988 99999999999999997553
No 66
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=98.29 E-value=6.7e-06 Score=74.33 Aligned_cols=147 Identities=14% Similarity=0.143 Sum_probs=114.6
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHH
Q psy14164 144 PVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFI 223 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~ 223 (361)
+.+...+.+.+...|..|+..|+.++.+++.....-+ ..+++.|..++..+++..|+..|+.+|+.++.+-.+.+..+.
T Consensus 18 ~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~-~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~ 96 (242)
T 2qk2_A 18 KDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYA 96 (242)
T ss_dssp TTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHH
T ss_pred HHHHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCCH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3477888999999999999999999987554211101 246778888885347889999999999999976444333333
Q ss_pred hhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 224 KRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 224 ~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
...++.|+..+.++...+|..|+.++..++...+ . ..+++.+...|.+. +..+++.++..|..++...
T Consensus 97 -~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~-~------~~ll~~l~~~l~~~---~~~vr~~~l~~l~~~l~~~ 164 (242)
T 2qk2_A 97 -SACVPSLLEKFKEKKPNVVTALREAIDAIYASTS-L------EAQQESIVESLSNK---NPSVKSETALFIARALTRT 164 (242)
T ss_dssp -HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC-H------HHHHHHHHHHTTCS---CHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC-H------HHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999987532 1 13578888999988 9999999999999977654
No 67
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.28 E-value=2.6e-06 Score=90.00 Aligned_cols=180 Identities=13% Similarity=0.200 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCH-HHHHHHHhcChHHHHHHhhc
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNP-FSQNFIIQTDFLNLLLTSIE 193 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~-~~q~~v~~~g~l~~Ll~LL~ 193 (361)
..+..|...|..+++... ..+.. ..++.+...|.+++..+|..|++++|.++.+.+ ..-...+ ..++|.|+..|.
T Consensus 343 ~~r~~a~~~l~~l~~~~~--~~~~~-~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~ 418 (876)
T 1qgr_A 343 NPCKAAGVCLMLLATCCE--DDIVP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMK 418 (876)
T ss_dssp CHHHHHHHHHHHHHHHHG--GGGHH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCc--HhhHH-HHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhC
Confidence 456666666666654322 11111 235666677888999999999999999998754 3222222 358999999998
Q ss_pred cCCCHHHHHHHHHHHHHHhcCChhhH--HHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc-------------
Q psy14164 194 HDSNTTVQVKSLYAVSCLVRENEECL--KEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN------------- 258 (361)
Q Consensus 194 ~~~~~~v~~~Al~ALS~l~r~~~~~~--~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~------------- 258 (361)
+ ++..||..|+|+|++++...+... ..++ ...++.|+..|.++ .+++..|++++.+++....
T Consensus 419 d-~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l-~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~ 495 (876)
T 1qgr_A 419 D-PSVVVRDTAAWTVGRICELLPEAAINDVYL-APLLQCLIEGLSAE-PRVASNVCWAFSSLAEAAYEAADVADDQEEPA 495 (876)
T ss_dssp C-SSHHHHHHHHHHHHHHHHHCGGGTSSTTTH-HHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCC
T ss_pred C-CCHHHHHHHHHHHHHHHHhCchhcccHHHH-HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 5 678999999999999998755421 1121 34567888888775 9999999999999986411
Q ss_pred --hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 259 --QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 259 --~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
....++ ..+++.|..++......+..++..++.+|..++...+
T Consensus 496 ~~~l~~~~--~~il~~L~~~l~~~~~~~~~~r~~~~~~l~~l~~~~~ 540 (876)
T 1qgr_A 496 TYCLSSSF--ELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSA 540 (876)
T ss_dssp CCSSTTTH--HHHHHHHHHHTTSCSSCSTTHHHHHHHHHHHHHHTCC
T ss_pred chhhhHhH--HHHHHHHHHHHhCcCcchhhHHHHHHHHHHHHHHHCc
Confidence 122222 2467888888876411235788889999999887653
No 68
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=98.25 E-value=2.9e-05 Score=72.68 Aligned_cols=241 Identities=13% Similarity=0.140 Sum_probs=144.9
Q ss_pred HHHHHHHhcC-C--C-CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH--hhcCCCHHHHHHHHHHHHHHhhcCHH
Q psy14164 101 EKIIKTLKEN-Q--D-QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQP--LLEGSDPELRWRAAETVADIVQNNPF 174 (361)
Q Consensus 101 k~~l~~L~~~-~--~-~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~--LL~s~~~~vr~~Aa~~Lg~iaqnn~~ 174 (361)
.++...+.+. . . +.+....||+.|.++.+++...-.+.... +..|-. |..+.++.+|+.|+++||.+.+|||.
T Consensus 25 ~~~r~ll~sg~~~~~~D~~~le~aLD~L~ElSHDi~~G~KI~~~e-f~lL~nL~~~~~~~~~~rE~aarII~ssLRNNP~ 103 (315)
T 3qml_C 25 KEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAHDYKHGYKIITHE-FALLANLSLNENLPLTLRELSTRVITSCLRNNPP 103 (315)
T ss_dssp HHHHHHHHHCSSCCHHHHHHHHHHHHHHGGGTTSHHHHHHHHHHH-HHHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHhhhhHHhhhHHHhCc-HHHHHHHHhhccCChhHHHHHHHHHHHHHccCHH
Confidence 4455555553 2 2 23578899999999999998877766532 444444 44567789999999999999999999
Q ss_pred HHHHHHhc--ChHHHHHHhhcc------CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC--CHHHHH
Q psy14164 175 SQNFIIQT--DFLNLLLTSIEH------DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK--KEKLVI 244 (361)
Q Consensus 175 ~q~~v~~~--g~l~~Ll~LL~~------~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~--~~~v~~ 244 (361)
+-+.|.+. ..+..+..-|.. .....+++.-+++|..|+... ..| ...|+..|.+++... +..+|.
T Consensus 104 Al~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~----~~F-~~~~m~~L~~ly~~~~~d~~~k~ 178 (315)
T 3qml_C 104 VVEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTS----EDL-PIYSTVVLQNVYERNNKDKQLQI 178 (315)
T ss_dssp HHHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCS----TTC---CCHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhcCh----Hhh-hhccHHHHHHHHccCCCCHHHHH
Confidence 99988775 333333332221 134578888999999999864 234 366889998888877 999999
Q ss_pred HHHHHHHHHhcC---Cc------hHHHHHH-----hCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhc
Q psy14164 245 KSCFLIACLCTD---NN------QVKQVLL-----SMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCR 310 (361)
Q Consensus 245 kA~~ll~~L~~~---~~------~~~~~l~-----~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~ 310 (361)
|++.+|..+... .. ..++.+- .+++...+-.++.+. ..|..-....-..|.+|=+..+..+
T Consensus 179 Kvl~li~d~f~~~~~~~~~~~~~~~kR~~e~~~~~~q~w~~~~q~~iq~k-~~dE~~~r~fF~~L~~ik~~~~~~l---- 253 (315)
T 3qml_C 179 KVLELISKILKADMYENDDTNLILFKRNAENWSSNLQEWANEFQEMVQNK-SIDELHTRTFFDTLYNLKKIFKSDI---- 253 (315)
T ss_dssp HHHHHHHHHHHHHTTC-------------------CHHHHHHHHHHHTCT-TSCHHHHHHHHHHHHHHHHHHGGGS----
T ss_pred HHHHHHHHHcccccccccccccchhhhcccccCchHHHHHHHHHHHHhcc-ccCHHHHHHHHHHHHHHHHhccccc----
Confidence 999999988741 10 1111111 112444555655543 2233334455666777665442222
Q ss_pred cCcchHHHHHHHHH----HhhcCh--hhhHHHHHHHHHHHH---HhcCCCC
Q psy14164 311 LEPLNLKFKLNFIK----EKHAGN--EVYHKELEYVNSVLT---EVFEEDS 352 (361)
Q Consensus 311 ~~~l~l~~~Le~~~----~~l~~~--~e~~~e~~~~~~il~---~~f~~~~ 352 (361)
.+...|.+||-+-. +++.+. +-..++-++=..+++ ..||.|-
T Consensus 254 K~~~~FLnWLa~E~e~Rk~~~~~~~~~rd~eq~~FD~~li~sRH~VFGNPm 304 (315)
T 3qml_C 254 TINKGFLNWLAQQCKARQSNLDNGLQERDTEQDSFDKKLIDSRHLIFGNPM 304 (315)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTSCCSCCCHHHHHHHHHHHHHHTTTC----
T ss_pred CCCHHHHHHHHHHHHHHHhhhccccccCChHHHHHHHHHHHHHHHHcCCch
Confidence 33347888887543 232211 112333444444544 5677653
No 69
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.24 E-value=6.4e-05 Score=77.82 Aligned_cols=170 Identities=10% Similarity=-0.007 Sum_probs=133.3
Q ss_pred CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHh
Q psy14164 112 DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTS 191 (361)
Q Consensus 112 ~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~L 191 (361)
.+...|..++..+.++.-..... .-|+..+++++.+++..+|..+--.+..++..+++.--. ++..+.+=
T Consensus 50 ~~~~~k~~~l~Kli~l~~~G~d~-----s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~~e~~~L-----~iN~l~kD 119 (621)
T 2vgl_A 50 LDGYSKKKYVCKLLFIFLLGHDI-----DFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRL-----INNAIKND 119 (621)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCCC-----CSCHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCHHHHHH-----HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCC-----chhHHHHHHHhcCCCHHHHHHHHHHHHHHccCCcHHHHH-----HHHHHHHh
Confidence 45677888888887764322111 247899999999999999999999999999888754322 35556666
Q ss_pred hccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhh--ccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCc
Q psy14164 192 IEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCI--QSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGM 269 (361)
Q Consensus 192 L~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL--~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~ 269 (361)
|.+ +++.+|.-|+.+||++. .+.-. ...++.+.++| .+.++.||++|+.++..+...+|+.... .++
T Consensus 120 l~~-~n~~ir~lALr~L~~i~--~~e~~-----~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~~---~~~ 188 (621)
T 2vgl_A 120 LAS-RNPTFMGLALHCIANVG--SREMA-----EAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPM---GDW 188 (621)
T ss_dssp HHS-CCHHHHHHHHHHHHHHC--CHHHH-----HHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCC---CSC
T ss_pred cCC-CCHHHHHHHHHHhhccC--CHHHH-----HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcCc---hhH
Confidence 664 68899999999999994 33322 24567888999 8889999999999999999877765432 589
Q ss_pred HHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHH
Q psy14164 270 VEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEA 305 (361)
Q Consensus 270 i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~ 305 (361)
++.+..+|... |+.++..|+.+|..+....|..
T Consensus 189 ~~~l~~lL~d~---d~~V~~~a~~~l~~i~~~~~~~ 221 (621)
T 2vgl_A 189 TSRVVHLLNDQ---HLGVVTAATSLITTLAQKNPEE 221 (621)
T ss_dssp HHHHHHHTTCS---CHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHhCCC---CccHHHHHHHHHHHHHHhChHH
Confidence 99999999877 9999999999999999888753
No 70
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.16 E-value=0.00029 Score=74.32 Aligned_cols=200 Identities=10% Similarity=0.123 Sum_probs=129.9
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccH--HHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHH
Q psy14164 100 LEKIIKTLKENQDQKDICIGALDNLSDYICSIDYA--NDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQN 177 (361)
Q Consensus 100 mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna--~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~ 177 (361)
+...+..+.+.+.+.+.+..|+..|..++...... ........++.+..++.+++..+|..|+++|+.++...+..-.
T Consensus 174 l~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 253 (876)
T 1qgr_A 174 LTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYME 253 (876)
T ss_dssp HHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCH
T ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 33344444443335677888999988877543211 0000011366677788889999999999999999987765422
Q ss_pred HHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCh---------------------hh----HHHHH---------
Q psy14164 178 FIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENE---------------------EC----LKEFI--------- 223 (361)
Q Consensus 178 ~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~---------------------~~----~~~f~--------- 223 (361)
..+...+++.++..+.+ .++.++..|+..++.+++... .. ...++
T Consensus 254 ~~~~~~l~~~~~~~~~~-~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~ 332 (876)
T 1qgr_A 254 TYMGPALFAITIEAMKS-DIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTK 332 (876)
T ss_dssp HHHTTTHHHHHHHHHTC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhc
Confidence 33334677777776654 456777777777776664210 00 00000
Q ss_pred ------------------------h-------hCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc-hHHHHHHhCCcHH
Q psy14164 224 ------------------------K-------RDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN-QVKQVLLSMGMVE 271 (361)
Q Consensus 224 ------------------------~-------~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~-~~~~~l~~~g~i~ 271 (361)
. ...++.+...|.+++.++|..|++++..++.+.. +...... ..+++
T Consensus 333 ~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~ 411 (876)
T 1qgr_A 333 QDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMP 411 (876)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHCcHhhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Confidence 0 0123445566677889999999999999987643 3332222 34788
Q ss_pred HHHHhccCCCCCChhHHHHHHHHHHHHHhcChH
Q psy14164 272 QMCVLIDIEDALDTEMNEHLLSALASLIKDSPE 304 (361)
Q Consensus 272 ~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~ 304 (361)
.++..|..+ +..+|..|+++|..++...+.
T Consensus 412 ~l~~~l~d~---~~~vr~~a~~~l~~~~~~~~~ 441 (876)
T 1qgr_A 412 TLIELMKDP---SVVVRDTAAWTVGRICELLPE 441 (876)
T ss_dssp HHHHHHTCS---SHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHhCCC---CHHHHHHHHHHHHHHHHhCch
Confidence 999999887 899999999999999987643
No 71
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=98.12 E-value=0.00017 Score=65.24 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=138.7
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
.+..|+.+|...++.++.+|+.+|+.+...-|.......=..+++.++.++.+ .++.+..+|+-+|-.+..+.|..-..
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~-~dEkval~A~r~L~~LLe~vpL~~~~ 112 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQ-ENEKVTIKALRALGYLVKDVPMGSKT 112 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCS-TTHHHHHHHHHHHHHHHTTCCBCHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHcCCCCCHHH
Confidence 36778889999999999999999999998754444444445699999999986 78899999999999999998887777
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
|. -....|..++.+++.-++..|+-.+..+---.+ . .+++..+..++++. |.+++..++.+|.+++..
T Consensus 113 y~--Kl~~aL~dlik~~~~il~~eaae~Lgklkv~~~-~------~~V~~~l~sLl~Sk---d~~vK~agl~~L~eia~~ 180 (265)
T 3b2a_A 113 FL--KAAKTLVSLLESPDDMMRIETIDVLSKLQPLED-S------KLVRTYINELVVSP---DLYTKVAGFCLFLNMLNS 180 (265)
T ss_dssp HH--HHHHHHHHHTTSCCHHHHHHHHHHHHHCCBSCC-C------HHHHHHHHHHHTCS---SHHHHHHHHHHHHHHGGG
T ss_pred HH--HHHHHHHHHhcCCCchHHHHHHHHhCcCCcccc-h------HHHHHHHHHHHhCC---ChhHHHHHHHHHHHhhcc
Confidence 76 356788888889999999999999998822121 1 14577788888888 999999999999999976
Q ss_pred ChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcCCC
Q psy14164 302 SPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEED 351 (361)
Q Consensus 302 ~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~~~ 351 (361)
+.+ ++ .+.+++.+...-++ + +.....+++-.+++..++-+
T Consensus 181 S~D-------~~-i~~~I~~eI~elL~-~-eD~~l~e~aLd~Le~ils~p 220 (265)
T 3b2a_A 181 SAD-------SG-HLTLILDEIPSLLQ-N-DNEFIVELALDVLEKALSFP 220 (265)
T ss_dssp CSS-------CC-CGGGTTTTHHHHHT-C-SCHHHHHHHHHHHHHHTTSC
T ss_pred cCC-------HH-HHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHcCc
Confidence 521 11 11222223333333 3 24556677777777766643
No 72
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.11 E-value=5.2e-05 Score=83.92 Aligned_cols=185 Identities=10% Similarity=0.130 Sum_probs=132.9
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
++.|+..+.+.+..+|..++.+||.++...| ...+|.|.+.+.+ .+..+|..++.++..++.+.+......
T Consensus 933 ~~~L~~~~~~~~~~~r~~~a~~lg~l~~~~~--------~~l~p~l~~~l~~-~~~~~R~~~~~~l~~~~~~~~~~~~~~ 1003 (1230)
T 1u6g_C 933 WALLLKHCECAEEGTRNVVAECLGKLTLIDP--------ETLLPRLKGYLIS-GSSYARSSVVTAVKFTISDHPQPIDPL 1003 (1230)
T ss_dssp HHHHTTCCCCSSTTHHHHHHHHHHHHHHSSG--------GGTHHHHTTTSSS-SCHHHHHHHHHHTGGGCCSSCCTHHHH
T ss_pred HHHHHHHhcCcchhhHHHHHHHHhhhhccCh--------HHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHccCchhhHHH
Confidence 3444555556778899999999999998876 4588989888886 567899999999998887766554433
Q ss_pred HhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCC---------------CCChhH
Q psy14164 223 IKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIED---------------ALDTEM 287 (361)
Q Consensus 223 ~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~---------------~~d~~~ 287 (361)
+. .-++.++..|++++..||+.|+.++..++...+......+. .+++.|...+...+ ....++
T Consensus 1004 l~-~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~l~-~~lp~l~~~~~~~~~~~~~v~~gp~k~~vd~~l~~ 1081 (1230)
T 1u6g_C 1004 LK-NCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLD-TVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDI 1081 (1230)
T ss_dssp HH-HHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHH-HHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHH
T ss_pred HH-HHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcChHhHHHHHH-HHHHHHHHHhcccHHhheeeccCCcccccCCcHHH
Confidence 32 23466677889999999999999999998877665433332 36777777664330 012389
Q ss_pred HHHHHHHHHHHHhcChHHHHhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcC
Q psy14164 288 NEHLLSALASLIKDSPEAQSLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFE 349 (361)
Q Consensus 288 ~e~al~aL~~L~~~~~~~~~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~ 349 (361)
|+.|..++..|+..+... ..+.+++.+-+..+..+ .|+.-+|..++.++..
T Consensus 1082 rk~a~~~~~~ll~~~~~~--------i~~~~~~~~~~~gl~d~---~di~~~~~~~l~~l~~ 1132 (1230)
T 1u6g_C 1082 RKAAFECMYTLLDSCLDR--------LDIFEFLNHVEDGLKDH---YDIKMLTFLMLVRLST 1132 (1230)
T ss_dssp HHHHHHHHHHHHHSSCSS--------SCHHHHHHHHHHTTSSC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh--------CCHHHHHHHHHcccCch---HHHHHHHHHHHHHHHh
Confidence 999999999999876432 24566777766666643 4666677777776654
No 73
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.05 E-value=1.7e-05 Score=83.65 Aligned_cols=198 Identities=13% Similarity=0.185 Sum_probs=132.1
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccH-HHHHHCCCHHHHHHhhcC---------------CCHHHHHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYA-NDFLKMGGLPVLQPLLEG---------------SDPELRWRAA 162 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna-~~~~~~Gg~~~Lv~LL~s---------------~~~~vr~~Aa 162 (361)
.|...+..+...+.+...+..++..|..++...... ..+.. ..++.++..|.. ....+|..++
T Consensus 499 il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~~~~~~~~~-~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 577 (861)
T 2bpt_A 499 LVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSA-SISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNIL 577 (861)
T ss_dssp HHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHHH-HHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHcchhhHHHHH-HHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHH
Confidence 344444555543332456777788877777644322 11111 246667776652 2457899999
Q ss_pred HHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCH-HHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHH
Q psy14164 163 ETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNT-TVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEK 241 (361)
Q Consensus 163 ~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~-~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~ 241 (361)
.+|++++..-+..-..++ ...++.++.++... +. .++..+++++++++.........++ ...++.|...|.+++..
T Consensus 578 ~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~~-~~~~v~~~~~~~l~~l~~~~~~~~~~~l-~~i~~~l~~~l~~~~~~ 654 (861)
T 2bpt_A 578 TVLAAVIRKSPSSVEPVA-DMLMGLFFRLLEKK-DSAFIEDDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQVDSP 654 (861)
T ss_dssp HHHHHHHHHCGGGTGGGH-HHHHHHHHHHHHST-TGGGTHHHHHHHHHHHHHHHGGGGHHHH-HHHHHHHHHHHHCTTSH
T ss_pred HHHHHHHHHhhhhhHHHH-HHHHHHHHHHHccC-CCCcHHHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHHhccccHH
Confidence 999999987654111111 24778888888763 34 7899999999999876544444444 24678889999888889
Q ss_pred HHHHHHHHHHHHhcCC-chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 242 LVIKSCFLIACLCTDN-NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 242 v~~kA~~ll~~L~~~~-~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
++..|+.++..++..- .....++ ..+++.++..|.++ +.+.++++.++.++..++...+
T Consensus 655 vr~~a~~~l~~l~~~~~~~~~~~~--~~l~~~l~~~l~~~-~~~~~vr~~~~~~l~~l~~~~~ 714 (861)
T 2bpt_A 655 VSITAVGFIADISNSLEEDFRRYS--DAMMNVLAQMISNP-NARRELKPAVLSVFGDIASNIG 714 (861)
T ss_dssp HHHHHHHHHHHHHHHTGGGGHHHH--HHHHHHHHHHHHCT-TCCTTHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHhchhccchH--HHHHHHHHHHhCCc-cccHhhhHHHHHHHHHHHHHhh
Confidence 9999999999998753 2333333 35677888888765 1137899999999999887543
No 74
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=98.01 E-value=0.001 Score=58.14 Aligned_cols=166 Identities=12% Similarity=0.158 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhh-cCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc
Q psy14164 116 ICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLL-EGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH 194 (361)
Q Consensus 116 ~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL-~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~ 194 (361)
.+..|+..+..+.+....... -.+.-|+.+| .|+.-.+-..-++++|.++.-+|+.-. +++|.|..-..-
T Consensus 48 V~kNAl~vi~~i~~~~~el~e----pl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v~-----~vVp~lfanyri 118 (253)
T 2db0_A 48 VVKNAISIIMVIAKTREDLYE----PMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVK-----SMIPVLFANYRI 118 (253)
T ss_dssp HHHHHHHHHHHHHTTCGGGHH----HHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHHH-----HHHHHHHHHSCC
T ss_pred HHHhHHHHHHHHHHHhHHHHH----HHHHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHHH-----hhHHHHHHHHhc
Confidence 566777777776665442211 0133344444 466667777889999999999997443 468888887776
Q ss_pred CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHH
Q psy14164 195 DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMC 274 (361)
Q Consensus 195 ~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv 274 (361)
.++.+|..-.|+|.-|.|.||.....+ +.-+..+|.+++..=|.-|..+|..+-.+++ +++ .-+++.|.
T Consensus 119 -gd~kikIn~~yaLeeIaranP~l~~~v-----~rdi~smltskd~~Dkl~aLnFi~alGen~~---~yv--~PfLprL~ 187 (253)
T 2db0_A 119 -GDEKTKINVSYALEEIAKANPMLMASI-----VRDFMSMLSSKNREDKLTALNFIEAMGENSF---KYV--NPFLPRII 187 (253)
T ss_dssp -CSHHHHHHHHHHHHHHHHHCHHHHHHH-----HHHHHHHTSCSSHHHHHHHHHHHHTCCTTTH---HHH--GGGHHHHH
T ss_pred -CCccceecHHHHHHHHHHhChHHHHHH-----HHHHHHHhcCCChHHHHHHHHHHHHHhccCc---ccc--CcchHHHH
Confidence 488999999999999999998765433 4567778889998778888888887755544 333 25799999
Q ss_pred HhccCCCCCChhHHHHHHHHHHHHHhcChH
Q psy14164 275 VLIDIEDALDTEMNEHLLSALASLIKDSPE 304 (361)
Q Consensus 275 ~lL~~~~~~d~~~~e~al~aL~~L~~~~~~ 304 (361)
.||... |.-+|..+..+|.+++..+|.
T Consensus 188 aLL~D~---deiVRaSaVEtL~~lA~~npk 214 (253)
T 2db0_A 188 NLLHDG---DEIVRASAVEALVHLATLNDK 214 (253)
T ss_dssp GGGGCS---SHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHcCc---chhhhHHHHHHHHHHHHcCHH
Confidence 999998 999999999999999999975
No 75
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=97.93 E-value=0.0008 Score=63.97 Aligned_cols=156 Identities=13% Similarity=0.106 Sum_probs=122.4
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHh-
Q psy14164 146 LQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIK- 224 (361)
Q Consensus 146 Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~- 224 (361)
++.-|.+++...+..|+.-|..+.+.....-..|++.+|+..|+++..+ .+-+.+..++.|+.++.- +..+...++.
T Consensus 123 iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~-~~gN~q~Y~L~AL~~LM~-~v~Gm~gvvs~ 200 (339)
T 3dad_A 123 ILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAA-ADHNYQSYILRALGQLML-FVDGMLGVVAH 200 (339)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTT-SCHHHHHHHHHHHHHHTT-SHHHHHHHHHC
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHh-cChHHHHHHHHHHHHHHh-ccccccchhCC
Confidence 4454556777888899999999888777788889999999999999986 477999999999999876 6777777774
Q ss_pred hCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHH--------hCC--cHHHHHHhccCCCCCChhHHHHHHHH
Q psy14164 225 RDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLL--------SMG--MVEQMCVLIDIEDALDTEMNEHLLSA 294 (361)
Q Consensus 225 ~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~--------~~g--~i~~Lv~lL~~~~~~d~~~~e~al~a 294 (361)
...+..|..++.+.+..|.+.|..++-.++...+.....+. +.| .+..|+.+|...+..|.+++.+++..
T Consensus 201 ~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtL 280 (339)
T 3dad_A 201 SDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTL 280 (339)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 34788889999988999999999999998876543332222 122 36789999972222399999999999
Q ss_pred HHHHHhcCh
Q psy14164 295 LASLIKDSP 303 (361)
Q Consensus 295 L~~L~~~~~ 303 (361)
|-.++...|
T Consensus 281 IN~lL~~ap 289 (339)
T 3dad_A 281 INKTLAALP 289 (339)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhcCC
Confidence 988888766
No 76
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=97.93 E-value=0.00016 Score=79.95 Aligned_cols=189 Identities=11% Similarity=0.116 Sum_probs=130.3
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhhcCccc---HHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYICSIDY---ANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQN 177 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lve~idn---a~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~ 177 (361)
...+..+.+ .+.+.+..|+..|...+..-.. ...+ -..++.|++.|.++++.+|..|+.+|+.++...+..
T Consensus 9 ~~lL~~l~s--~d~~~R~~A~~~L~~~l~~~~~~~~~~~~--~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~-- 82 (1230)
T 1u6g_C 9 SNLLEKMTS--SDKDFRFMATNDLMTELQKDSIKLDDDSE--RKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY-- 82 (1230)
T ss_dssp HHHHHHTTC--SSHHHHHHHHHHHHHHTSSSCCSCCTTHH--HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH--
T ss_pred HHHHHhcCC--CCHhHHHHHHHHHHHHHcccccCCChhHH--HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHH--
Confidence 344444443 3456788888887776532100 0011 124778899999999999999999999999865541
Q ss_pred HHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhh-----HHHHHhhCcHHHHHHhhc-cCCHHHHHHHHHHHH
Q psy14164 178 FIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEEC-----LKEFIKRDGFSVLLRCIQ-SKKEKLVIKSCFLIA 251 (361)
Q Consensus 178 ~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~-----~~~f~~~ggi~~Lv~lL~-s~~~~v~~kA~~ll~ 251 (361)
. + ..+++.|+..+.+ ++..+|..|+.+|+.++....+. .....-...++.|+..+. +++.+++..|+.++.
T Consensus 83 ~-~-~~i~~~Ll~~l~d-~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~ 159 (1230)
T 1u6g_C 83 Q-V-ETIVDTLCTNMLS-DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMA 159 (1230)
T ss_dssp H-H-HHHHHHHHHHTTC-SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHH
T ss_pred H-H-HHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 1 1 2367888888875 45589999999999998765432 011122456889999998 578999999999999
Q ss_pred HHhcCC-chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 252 CLCTDN-NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 252 ~L~~~~-~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
.++... .....++ ..+++.+...|.++ +..+|+.|+.+|..++...+
T Consensus 160 ~~~~~~~~~l~~~~--~~ll~~l~~~L~~~---~~~vR~~a~~al~~l~~~~~ 207 (1230)
T 1u6g_C 160 DMLSRQGGLLVNFH--PSILTCLLPQLTSP---RLAVRKRTIIALGHLVMSCG 207 (1230)
T ss_dssp HHHHHTCSSCTTTH--HHHHHHHGGGGGCS---SHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHhHhHHHHHH--HHHHHHHHHHHcCC---cHHHHHHHHHHHHHHHHhcC
Confidence 998532 1111111 24677888888887 88999999999999887553
No 77
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=97.81 E-value=0.00098 Score=64.27 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=84.3
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
+..+++++.+++..+|...--.+-+++...+ +.++ +...|.+=+.+ +++-+|..|+.++++|.- +.-.+
T Consensus 70 f~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~---e~iL---v~Nsl~kDl~~-~N~~iR~lALRtL~~I~~--~~m~~-- 138 (355)
T 3tjz_B 70 FFAMTKLFQSNDPTLRRMCYLTIKEMSCIAE---DVII---VTSSLTKDMTG-KEDSYRGPAVRALCQITD--STMLQ-- 138 (355)
T ss_dssp HHHHHGGGGCCCHHHHHHHHHHHHHHTTTSS---CGGG---GHHHHHHHHHS-SCHHHHHHHHHHHHHHCC--TTTHH--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHhCCCHH---HHHH---HHHHHHhhcCC-CcHhHHHHHHHHHhcCCC--HHHHH--
Confidence 4555667777777777777766666665422 1111 34455555554 456777777777777743 22222
Q ss_pred HhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 223 IKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 223 ~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
...+.+.++|.+.++-||++|+.++.+|....|+..+ +++..+-+++.+. ++-++-+|+.+|..+...+
T Consensus 139 ---~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v~-----~~~~~l~~ll~d~---n~~V~~~Al~lL~ei~~~d 207 (355)
T 3tjz_B 139 ---AIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK-----RWVNEAQEAASSD---NIMVQYHALGLLYHVRKND 207 (355)
T ss_dssp ---HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHHH-----TTHHHHHHHTTCS---SHHHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHHH-----HHHHHHHHHhcCC---CccHHHHHHHHHHHHHhhc
Confidence 2234566677777777777777777777666655432 4666677777666 6666667777776666555
Q ss_pred h
Q psy14164 303 P 303 (361)
Q Consensus 303 ~ 303 (361)
+
T Consensus 208 ~ 208 (355)
T 3tjz_B 208 R 208 (355)
T ss_dssp H
T ss_pred h
Confidence 4
No 78
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=97.80 E-value=7e-05 Score=68.58 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=112.9
Q ss_pred HHHhhcCCCHHHHHHHHHHHHH-HhhcCHHHHHHHHh-cChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCh-hhHH-H
Q psy14164 146 LQPLLEGSDPELRWRAAETVAD-IVQNNPFSQNFIIQ-TDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENE-ECLK-E 221 (361)
Q Consensus 146 Lv~LL~s~~~~vr~~Aa~~Lg~-iaqnn~~~q~~v~~-~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~-~~~~-~ 221 (361)
+...+.|++..-|..|+..|+. ++.+++.......+ ...+..|.+.+..+++..++..|+.+|+.|+.+-. +.+. .
T Consensus 21 f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~ 100 (249)
T 2qk1_A 21 FQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKD 100 (249)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHH
Confidence 3456789999999999999999 98776543210011 13577788888556788999999999999997654 3443 3
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCC-chHHH-HHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDN-NQVKQ-VLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~-~~~~~-~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
+. .-.++.|+..+.+....|+..+..++..++..- +.... ++ ..+++.|...|.+. +..+++.++.+|..++
T Consensus 101 y~-~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l--~~ll~~l~~~l~~k---~~~vk~~al~~l~~~~ 174 (249)
T 2qk1_A 101 YV-SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRN--EDMLKDILEHMKHK---TPQIRMECTQLFNASM 174 (249)
T ss_dssp HH-HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTT--HHHHHHHHHHTTCS---SHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcH--HHHHHHHHHHHcCC---ChHHHHHHHHHHHHHH
Confidence 43 236889999999989999999999998888642 21100 01 12577888999988 8999999999999999
Q ss_pred hcCh
Q psy14164 300 KDSP 303 (361)
Q Consensus 300 ~~~~ 303 (361)
...+
T Consensus 175 ~~~~ 178 (249)
T 2qk1_A 175 KEEK 178 (249)
T ss_dssp HHCC
T ss_pred HHcC
Confidence 7665
No 79
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=97.76 E-value=0.00068 Score=70.08 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=91.0
Q ss_pred CHHhHHHHHHHHHhhcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhh--cCC
Q psy14164 78 NEANRGFLLDALNSMMVNVGAELEKIIKTLKENQ--DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLL--EGS 153 (361)
Q Consensus 78 s~e~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~--~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL--~s~ 153 (361)
+.+.|+..-=++..+...+.+.+.-++..+...- .+.-.+-.||..|..+.. .+.+.. .++.+.++| .++
T Consensus 87 ~~~~Krl~YL~l~~~~~~~~e~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~-~e~~~~-----l~~~v~~~l~~~d~ 160 (621)
T 2vgl_A 87 RYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGS-REMAEA-----FAGEIPKILVAGDT 160 (621)
T ss_dssp CHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC-HHHHHH-----HTTHHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC-HHHHHH-----HHHHHHHHHhCCCC
Confidence 3445555555566666444555555444443211 234556777777777642 233332 368888999 889
Q ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChh
Q psy14164 154 DPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEE 217 (361)
Q Consensus 154 ~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~ 217 (361)
++-||..|+-++..+...+|..- -..+.++.|.++|. +.++.|+..|+.+|..++..++.
T Consensus 161 ~~~VRK~A~~al~kl~~~~p~~~---~~~~~~~~l~~lL~-d~d~~V~~~a~~~l~~i~~~~~~ 220 (621)
T 2vgl_A 161 MDSVKQSAALCLLRLYRTSPDLV---PMGDWTSRVVHLLN-DQHLGVVTAATSLITTLAQKNPE 220 (621)
T ss_dssp CHHHHHHHHHHHHHHHHHCGGGC---CCCSCHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHHHHhChhhc---CchhHHHHHHHHhC-CCCccHHHHHHHHHHHHHHhChH
Confidence 99999999999999999887532 22488999999997 47889999999999999987765
No 80
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=97.58 E-value=0.016 Score=53.57 Aligned_cols=190 Identities=13% Similarity=0.094 Sum_probs=121.8
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHh----hcCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHhcCh
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPL----LEGSDPELRWRAAETVADIVQN----NPFSQNFIIQTDF 184 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~L----L~s~~~~vr~~Aa~~Lg~iaqn----n~~~q~~v~~~g~ 184 (361)
+-..+..|++.|...+++ +...+.. -+..+++. +.+++..|...++.+|..+..- +....+.-. .-.
T Consensus 59 d~k~~~~ale~L~~~l~~--~~~~~~~--~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea-~~~ 133 (266)
T 2of3_A 59 DFKQHLAALDSLVRLADT--SPRSLLS--NSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEV-SAF 133 (266)
T ss_dssp CHHHHHHHHHHHHHHHHH--CHHHHHH--THHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH-HHH
T ss_pred CHHHHHHHHHHHHHHhhh--ChHHHHH--HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHH-HHH
Confidence 457788888888887753 2222221 23334442 2367999999999999887532 111111100 236
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHH
Q psy14164 185 LNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQV 263 (361)
Q Consensus 185 l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~ 263 (361)
+|.|+.-+-+ +.+.+|..+-..+-.++.-+++. ..++.+...+.+.+.|+|..++..+.++... +..
T Consensus 134 lP~LveKlGd-~k~~vR~~~r~il~~l~~v~~~~-------~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~---- 201 (266)
T 2of3_A 134 VPYLLLKTGE-AKDNMRTSVRDIVNVLSDVVGPL-------KMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS---- 201 (266)
T ss_dssp HHHHHHGGGC-SSHHHHHHHHHHHHHHHHHHCHH-------HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG----
T ss_pred HHHHHHHhCC-ChHHHHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC----
Confidence 8999888864 56688887776665544322222 2456778899999999999999999999865 322
Q ss_pred HHhCCcH---HHHHHhccCCCCCChhHHHHHHHHHHHHHhcC-hHHHHhhccCcchHHHHHHHHH
Q psy14164 264 LLSMGMV---EQMCVLIDIEDALDTEMNEHLLSALASLIKDS-PEAQSLCRLEPLNLKFKLNFIK 324 (361)
Q Consensus 264 l~~~g~i---~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~-~~~~~~~~~~~l~l~~~Le~~~ 324 (361)
....+ +.++.+|... |..+|..|+.++..+-... ...+...++-.-.-++.|++++
T Consensus 202 --~~~~l~~~~~ia~ll~D~---d~~VR~aAl~~lve~y~~~Gd~v~k~lg~L~~~~~~~l~er~ 261 (266)
T 2of3_A 202 --PLKSLSVEKTVAPFVGDK---DVNVRNAAINVLVACFKFEGDQMWKAAGRMADKDKSLVEERI 261 (266)
T ss_dssp --GGGGGCHHHHHGGGGGCS---SHHHHHHHHHHHHHHHHHHTTHHHHHHCCCCHHHHHHHHHHH
T ss_pred --ccccccchHHHHHHHcCC---CHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCHHHHHHHHHHH
Confidence 13467 9999999998 9999999999998776533 2333333322223344444443
No 81
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0043 Score=57.00 Aligned_cols=177 Identities=12% Similarity=0.147 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHhhcCccc---H-HHHHHCCCHHHH-HHhhcCCCHHHHHHHHHHHHHHhhcCHH-----HHHHHHhcC
Q psy14164 114 KDICIGALDNLSDYICSIDY---A-NDFLKMGGLPVL-QPLLEGSDPELRWRAAETVADIVQNNPF-----SQNFIIQTD 183 (361)
Q Consensus 114 ~~~~~~Al~~L~~lve~idn---a-~~~~~~Gg~~~L-v~LL~s~~~~vr~~Aa~~Lg~iaqnn~~-----~q~~v~~~g 183 (361)
=..|..|+++|..++..... . ..+...+.+..+ -..+...+..|...|+.+|..++..-.. ......-..
T Consensus 23 WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~ 102 (278)
T 4ffb_C 23 WKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLIST 102 (278)
T ss_dssp HHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH
Confidence 36788888888887764321 1 122234444444 4588899999999999999998864221 111112234
Q ss_pred hHHHHHH-hhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchH-
Q psy14164 184 FLNLLLT-SIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQV- 260 (361)
Q Consensus 184 ~l~~Ll~-LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~- 260 (361)
++|.|+. .|.+ ....++..|+.++..++....+.. . .++.+...+.+.+++++..++.+|..++.. +...
T Consensus 103 ~l~~lveK~l~~-~k~~~~~~a~~~l~~~~~~~~~~~-~-----~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~ 175 (278)
T 4ffb_C 103 WTPLLVEKGLTS-SRATTKTQSMSCILSLCGLDTSIT-Q-----SVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNV 175 (278)
T ss_dssp HHHHHHHHTSSC-CCHHHHHHHHHHHHHHHHTSSSSH-H-----HHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHhcCcHH-H-----HHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcC
Confidence 6787775 4654 567899999998888775432221 1 135667788999999999999999988754 2111
Q ss_pred -HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 261 -KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 261 -~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
....+ ..+++.+..+|.+. |..+|+.|..++..+...
T Consensus 176 ~~k~~l-~~i~~~l~k~l~d~---~~~VR~aA~~l~~~ly~~ 213 (278)
T 4ffb_C 176 NVQTFL-PELLKHVPQLAGHG---DRNVRSQTMNLIVEIYKV 213 (278)
T ss_dssp CHHHHH-HHHGGGHHHHHTCS---SHHHHHHHHHHHHHHHTC
T ss_pred CchhHH-HHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHH
Confidence 11111 13455677888888 999999999999888753
No 82
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=97.24 E-value=0.016 Score=62.29 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=100.3
Q ss_pred CHHHHHHhhc-CCCHHHHHHHHHHHHHHhh--cCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhh
Q psy14164 142 GLPVLQPLLE-GSDPELRWRAAETVADIVQ--NNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEEC 218 (361)
Q Consensus 142 g~~~Lv~LL~-s~~~~vr~~Aa~~Lg~iaq--nn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~ 218 (361)
.++.+++.|. +.++-+|..|+.++|-... +|+. ++..|+..+.++.+..||..|+.+|+-+..+.+..
T Consensus 542 ~~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~---------aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~e~ 612 (963)
T 4ady_A 542 LADDLITKMLASDESLLRYGGAFTIALAYAGTGNNS---------AVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDYTT 612 (963)
T ss_dssp GGHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHH---------HHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHH---------HHHHHHHHhccCCcHHHHHHHHHHHHhhccCCHHH
Confidence 5777777664 6788888888888775443 3432 46667776666677889999999999988776532
Q ss_pred HHHHHhhCcHHHHHH-hhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHH
Q psy14164 219 LKEFIKRDGFSVLLR-CIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALAS 297 (361)
Q Consensus 219 ~~~f~~~ggi~~Lv~-lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~ 297 (361)
++.++. ++++.+..+|..|++++.-++.+.+. ..++..|..+++.. +..++..|+.+|..
T Consensus 613 ---------v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~-------~~aid~L~~L~~D~---d~~Vrq~Ai~ALG~ 673 (963)
T 4ady_A 613 ---------VPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL-------QSAIDVLDPLTKDP---VDFVRQAAMIALSM 673 (963)
T ss_dssp ---------HHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC-------HHHHHHHHHHHTCS---SHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc-------HHHHHHHHHHccCC---CHHHHHHHHHHHHH
Confidence 334444 45677999999999999999877653 13466777777777 99999999999999
Q ss_pred HHhcChH
Q psy14164 298 LIKDSPE 304 (361)
Q Consensus 298 L~~~~~~ 304 (361)
+.....+
T Consensus 674 Ig~gtnn 680 (963)
T 4ady_A 674 ILIQQTE 680 (963)
T ss_dssp HSTTCCT
T ss_pred HhcCCcc
Confidence 9977644
No 83
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=97.23 E-value=0.0011 Score=63.85 Aligned_cols=155 Identities=15% Similarity=0.199 Sum_probs=90.8
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
.+++.++|.+.++-||..|+.+...+...+|+.- .+++..+-.++.+ .+..|...|+.+|..+.++...+...+
T Consensus 141 ~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v-----~~~~~~l~~ll~d-~n~~V~~~Al~lL~ei~~~d~~a~~kL 214 (355)
T 3tjz_B 141 ERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASS-DNIMVQYHALGLLYHVRKNDRLAVSKM 214 (355)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHH-----HTTHHHHHHHTTC-SSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHH-----HHHHHHHHHHhcC-CCccHHHHHHHHHHHHHhhchHHHHHH
Confidence 4556668889999999999999999998888743 2678888888875 677888899998888887555332222
Q ss_pred Hh---hCc-----------------------------HHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH
Q psy14164 223 IK---RDG-----------------------------FSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV 270 (361)
Q Consensus 223 ~~---~gg-----------------------------i~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i 270 (361)
+. .+| ++.|..+|++.+.-|.-.|+.+|.+|........ .-++
T Consensus 215 v~~l~~~~l~~~~~q~~llr~l~~~~~~d~~~~~~~~~~~l~~~L~~~~~aVvyEa~k~I~~l~~~~~~~~-----~~a~ 289 (355)
T 3tjz_B 215 ISKFTRHGLKSPFAYCMMIRVASRQLEDEDGSRDSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKEL-----APAV 289 (355)
T ss_dssp HHHHHSSCCSCHHHHHHHHHHHTCC-----------------CCCCCSSHHHHHHHHHHHTC----------------CC
T ss_pred HHHHhcCCCcChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHcCCChHHHHHHHHHHHhccCCCHHHH-----HHHH
Confidence 21 111 1233444555667778888888777644222111 2234
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhcc
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRL 311 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~ 311 (361)
..|..+|.++ ++.+|=.|++.|..++...|..+..|+.
T Consensus 290 ~~L~~fLss~---d~niryvaLr~L~~l~~~~P~~v~~~n~ 327 (355)
T 3tjz_B 290 SVLQLFCSSP---KAALRYAAVRTLNKVAMKHPSAVTACNL 327 (355)
T ss_dssp CTHHHHHHSS---SSSSHHHHHHCC----------------
T ss_pred HHHHHHHcCC---CchHHHHHHHHHHHHHHHCcHHHHHHHH
Confidence 5666778777 8899999999999999999998888743
No 84
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=97.23 E-value=0.016 Score=62.37 Aligned_cols=100 Identities=9% Similarity=0.103 Sum_probs=80.8
Q ss_pred HHHHHH-hhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 143 LPVLQP-LLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 143 ~~~Lv~-LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
+..|+. +.++.+..||..|+..||.+.-+++ ..++.++.+|.+..++.+|..|++||+-++.+++..
T Consensus 579 Iq~LL~~~~~d~~d~VRraAViaLGlI~~g~~---------e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~~--- 646 (963)
T 4ady_A 579 VKRLLHVAVSDSNDDVRRAAVIALGFVLLRDY---------TTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGLQ--- 646 (963)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSC---------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCCH---
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHhhccCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCcH---
Confidence 444555 3457888999999999999987775 357888887776678999999999999999887641
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
..+..|..++++.+..|++.|++++.-+..+..
T Consensus 647 ----~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gtn 679 (963)
T 4ady_A 647 ----SAIDVLDPLTKDPVDFVRQAAMIALSMILIQQT 679 (963)
T ss_dssp ----HHHHHHHHHHTCSSHHHHHHHHHHHHHHSTTCC
T ss_pred ----HHHHHHHHHccCCCHHHHHHHHHHHHHHhcCCc
Confidence 234577888888999999999999999887644
No 85
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=97.23 E-value=0.056 Score=47.32 Aligned_cols=200 Identities=13% Similarity=0.183 Sum_probs=142.5
Q ss_pred hHHHHHHHHHhhcCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHhh---cCccc----HHHHHHC---------CCH
Q psy14164 81 NRGFLLDALNSMMVNVGAELEKIIKTLKENQDQ-KDICIGALDNLSDYI---CSIDY----ANDFLKM---------GGL 143 (361)
Q Consensus 81 ~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~~~-~~~~~~Al~~L~~lv---e~idn----a~~~~~~---------Gg~ 143 (361)
+++||++.+..+--|-...-|.++.++.....+ .+....++..|..++ |.|+- |..|..+ +.+
T Consensus 30 d~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v~~vV 109 (253)
T 2db0_A 30 DESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMI 109 (253)
T ss_dssp CHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHHHhhH
Confidence 678888888777433356778888887765544 344555556655553 33333 2222111 234
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHH
Q psy14164 144 PVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFI 223 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~ 223 (361)
|.|..=..-.++.+|..-..+|+.++..||..--. ++.-+..++.+ ++..=|..|+.-|+.+--+++.-.
T Consensus 110 p~lfanyrigd~kikIn~~yaLeeIaranP~l~~~-----v~rdi~smlts-kd~~Dkl~aLnFi~alGen~~~yv---- 179 (253)
T 2db0_A 110 PVLFANYRIGDEKTKINVSYALEEIAKANPMLMAS-----IVRDFMSMLSS-KNREDKLTALNFIEAMGENSFKYV---- 179 (253)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHHH-----HHHHHHHHTSC-SSHHHHHHHHHHHHTCCTTTHHHH----
T ss_pred HHHHHHHhcCCccceecHHHHHHHHHHhChHHHHH-----HHHHHHHHhcC-CChHHHHHHHHHHHHHhccCcccc----
Confidence 44555556689999999999999999999986543 56678889985 777888889999998866544332
Q ss_pred hhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 224 KRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 224 ~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
..-+|.|+.+|.+.+.-||..|+-.+.+|+.-+|..|..+. ..+.-+... +..++..+-.+|..|+-
T Consensus 180 -~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~npklRkii~------~kl~e~~D~---S~lv~~~V~egL~rl~l 246 (253)
T 2db0_A 180 -NPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVI------KRLEELNDT---SSLVNKTVKEGISRLLL 246 (253)
T ss_dssp -GGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTSCHHHHHHHH------HHHHHCCCS---CHHHHHHHHHHHHHHHH
T ss_pred -CcchHHHHHHHcCcchhhhHHHHHHHHHHHHcCHHHHHHHH------HHHHHhcCc---HHHHHHHHHHHHHHHHH
Confidence 35578999999999999999999999999999888775542 334445665 77888888888887763
No 86
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=96.91 E-value=0.069 Score=51.81 Aligned_cols=158 Identities=17% Similarity=0.280 Sum_probs=115.0
Q ss_pred HHHHHHHHHhh--cCcccHHHHHHCCCHHHHHHhhc-----------CCCHHHHHHHHHHHHHHhhcCHHHHHHHHh-cC
Q psy14164 118 IGALDNLSDYI--CSIDYANDFLKMGGLPVLQPLLE-----------GSDPELRWRAAETVADIVQNNPFSQNFIIQ-TD 183 (361)
Q Consensus 118 ~~Al~~L~~lv--e~idna~~~~~~Gg~~~Lv~LL~-----------s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~-~g 183 (361)
...|..|...+ ..+++-..|+ .+|+..|+..|. ..+..+...+++||..+. |+...-+.+++ ..
T Consensus 85 ~~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalm-N~~~G~~~vl~~~~ 162 (383)
T 3eg5_B 85 LSCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEE 162 (383)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHT-SSHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHh-cchhhHHHHHcChH
Confidence 34556666544 3467888998 789999999875 234578889999999887 55555555555 47
Q ss_pred hHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCh-hh-HHHHH----------hhCcHHHHHHhhcc-CCHHHHHHHHHHH
Q psy14164 184 FLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENE-EC-LKEFI----------KRDGFSVLLRCIQS-KKEKLVIKSCFLI 250 (361)
Q Consensus 184 ~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~-~~-~~~f~----------~~ggi~~Lv~lL~s-~~~~v~~kA~~ll 250 (361)
++..|...|.+ +...+++.|+--|+.+|.-.. .+ ...++ +..-+..++..|.+ .+...+..+..+|
T Consensus 163 ~i~~l~~~L~s-~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lI 241 (383)
T 3eg5_B 163 GILLLVRAMDP-AVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLI 241 (383)
T ss_dssp HHHHHHHTCCT-TSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHH
Confidence 89999999986 677899999999998886442 22 22222 22347889999987 5889999999999
Q ss_pred HHHhcCCc------hHHHHHHhCCcHHHHHHhccC
Q psy14164 251 ACLCTDNN------QVKQVLLSMGMVEQMCVLIDI 279 (361)
Q Consensus 251 ~~L~~~~~------~~~~~l~~~g~i~~Lv~lL~~ 279 (361)
..++.+.+ ..+..+...|+.+.+-. |+.
T Consensus 242 N~li~~~~dl~~R~~lR~ef~~~Gl~~il~~-lr~ 275 (383)
T 3eg5_B 242 NALITPAEELDFRVHIRSELMRLGLHQVLQE-LRE 275 (383)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHTTHHHHHHH-HTT
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCChHHHHHH-Hhc
Confidence 99998754 35677888898877766 444
No 87
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=96.86 E-value=0.26 Score=46.78 Aligned_cols=172 Identities=12% Similarity=0.138 Sum_probs=117.3
Q ss_pred CHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhC---cHHHHHHhhccCCHHHHHHHHH
Q psy14164 172 NPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRD---GFSVLLRCIQSKKEKLVIKSCF 248 (361)
Q Consensus 172 n~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~g---gi~~Lv~lL~s~~~~v~~kA~~ 248 (361)
++.+...++..+.+..+.+.+.. ++-.|...|...+-.+...+......|+..+ -+.....+|.+++.-+|+.+.-
T Consensus 153 ~e~la~~iL~~~~f~~fF~yv~~-~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlK 231 (341)
T 1upk_A 153 HEPLAKIILWSEQFYDFFRYVEM-STFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLK 231 (341)
T ss_dssp SHHHHHHHHHSGGGGHHHHHTTC-SSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHH
T ss_pred hHHHHHHHhccHHHHHHHHHhcC-CCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHH
Confidence 34445555666666666666665 5678888888888887777777777888766 3556678899999999999999
Q ss_pred HHHHHhcC--CchH-HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC---hHHHHhhccCcchHHHHHHH
Q psy14164 249 LIACLCTD--NNQV-KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS---PEAQSLCRLEPLNLKFKLNF 322 (361)
Q Consensus 249 ll~~L~~~--~~~~-~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~---~~~~~~~~~~~l~l~~~Le~ 322 (361)
+++.|+.. +..+ .+++-+..-+..++.+|++. ...++-.|...+.-.+... +.....-...+-.|...|.+
T Consensus 232 LLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~---sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~ 308 (341)
T 1upk_A 232 LLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDK---SRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSK 308 (341)
T ss_dssp HHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCS---CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCc---hhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 99999975 2233 34444556689999999998 8999999999988887643 22232222222233333333
Q ss_pred HHHhhcChhhhHHHHHHHHHHHHHh
Q psy14164 323 IKEKHAGNEVYHKELEYVNSVLTEV 347 (361)
Q Consensus 323 ~~~~l~~~~e~~~e~~~~~~il~~~ 347 (361)
-...-...+.+.+|..|.-+.++..
T Consensus 309 f~~d~~eDeqF~dEK~~lI~~I~~L 333 (341)
T 1upk_A 309 FQNDRTEDEQFNDEKTYLVKQIRDL 333 (341)
T ss_dssp TTTTC-CCSHHHHHHHHHHHHHHTC
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhC
Confidence 2221122457888888888887765
No 88
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=96.81 E-value=0.023 Score=54.28 Aligned_cols=184 Identities=14% Similarity=0.222 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH 194 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~ 194 (361)
+....+++-|--+.++.+--..|++..|+..+...++.++.++-...+..|-.++..-.-|...+ ...+|-++..+.-
T Consensus 258 QVvtR~FDLL~LLmHdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDaksL~~t~L--~e~LPFi~~~i~~ 335 (619)
T 3c2g_A 258 QVIIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDAKALAKTPL--ENILPFLLRLIEI 335 (619)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCGGGGTSCC--TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccceeecccceeEEEEeecCCcHHHHhhhheeeeecchHHHhhccc--cccchHHHHHhcc
Confidence 45677888888888887777889999999999999999999999999999887764332222111 3578999998876
Q ss_pred CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhcc-------CCHHHHHHHHHHHHHHhcC-----------
Q psy14164 195 DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS-------KKEKLVIKSCFLIACLCTD----------- 256 (361)
Q Consensus 195 ~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s-------~~~~v~~kA~~ll~~L~~~----------- 256 (361)
.++..|......-|||.+.|..+..+.-+..|+++.|-..+.. .+..-+..||..++|-+..
T Consensus 336 h~eDdvvYSGTGFLSNVVAHKq~VKelAI~~nAI~LLh~~I~ky~~Lsdf~ea~Kkk~aC~IicN~LRalNNFLMmWIPm 415 (619)
T 3c2g_A 336 HPDDEVIYSGTGFLSNVVAHKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFLMMWIPT 415 (619)
T ss_dssp CCCHHHHHHHHHHHHHHSTTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCCSHHHHHHHHHHHHHHHHHHHHHHGGGSCC
T ss_pred CCCcceEEecchHHHHHHhcccchHHHHhccCcHHHHHHHHhhCCChhhhhhhhhhcchHHHHHHHHHHHhhheeEEEec
Confidence 5677999999999999999999888888899999988776542 2556677788877765531
Q ss_pred --------C---chHHHHHHhCCcHHHHHHhccCCCCCC---hhHHHHHHHHHHHHHh
Q psy14164 257 --------N---NQVKQVLLSMGMVEQMCVLIDIEDALD---TEMNEHLLSALASLIK 300 (361)
Q Consensus 257 --------~---~~~~~~l~~~g~i~~Lv~lL~~~~~~d---~~~~e~al~aL~~L~~ 300 (361)
+ ..+...+++..+++.|+.+|+.+.-+- -++|-..++...-++.
T Consensus 416 ~NGqr~~~G~~EqQQVckFIE~d~LKrLMtCLS~e~fDv~~LlELRSTILR~F~LvlR 473 (619)
T 3c2g_A 416 PNGETKTAGPNEKQQVCKFIEIDILKKLMSCLSCEGMDTPGLLELRSTILRSFILLLR 473 (619)
T ss_dssp TTSCCCCCCHHHHHHHHGGGSHHHHHHHHHHHHCCC-CCTTHHHHHHHHHHHHHHHHT
T ss_pred CCCccccCChHHHHHHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHhc
Confidence 1 134456777789999999998762112 2566677776665554
No 89
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=96.75 E-value=0.52 Score=46.79 Aligned_cols=195 Identities=16% Similarity=0.137 Sum_probs=120.0
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhhcCc----ccHHHHHHCCCHH-HHHH-hhcCCCHHHHHHHHHHHHHHhhcCHH
Q psy14164 101 EKIIKTLKENQDQKDICIGALDNLSDYICSI----DYANDFLKMGGLP-VLQP-LLEGSDPELRWRAAETVADIVQNNPF 174 (361)
Q Consensus 101 k~~l~~L~~~~~~~~~~~~Al~~L~~lve~i----dna~~~~~~Gg~~-~Lv~-LL~s~~~~vr~~Aa~~Lg~iaqnn~~ 174 (361)
+-.+..|.. ...++...-.|--+.+++... ..+..|.+..... .+.. ++..++.-....|+.+++.+++.++.
T Consensus 80 ~~~l~lL~~-~~~~d~vqYvL~Li~DlL~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~dd~~~ll~a~~l~~ll~~~~~~ 158 (480)
T 1ho8_A 80 IPLIHLLST-SDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLH 158 (480)
T ss_dssp HHHHHHHHS-CCCHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHCTTHHHHHHHHCSCSSHHHHHHHHHHHHHHHTSTTTC
T ss_pred HHHHHHHhh-cChHHHHHHHHHHHHHHHhcCcchHHHHHHHhhCcccchHHHHHHhcccchHHHHHHHHHHHHHhccCCc
Confidence 444455554 334455555566666766542 2234555554332 2333 44556666778888888888766655
Q ss_pred HHHHHHhcChHH--HHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCc--HHHHHHhhc----c---------
Q psy14164 175 SQNFIIQTDFLN--LLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDG--FSVLLRCIQ----S--------- 237 (361)
Q Consensus 175 ~q~~v~~~g~l~--~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~gg--i~~Lv~lL~----s--------- 237 (361)
..+.+ ...+. -++..|.+..+...+--++.+++.|.| .+..+..|...+| ++.++.++. +
T Consensus 159 ~~~~l--~~l~~~~~~~~~L~~~~~~~~~~i~v~~L~~Ll~-~~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~ 235 (480)
T 1ho8_A 159 NVKLV--EKLLKNNNLINILQNIEQMDTCYVCIRLLQELAV-IPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVAT 235 (480)
T ss_dssp CHHHH--HHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHT-SHHHHHHHHTTHHHHHHHHHHHHHHHHC----------
T ss_pred cHhHH--HHHhhhHHHHHHhccccCCchHHHHHHHHHHHhc-chhHHHHHHHcccchhHHHHHHHHHhhccccccccccc
Confidence 33222 11222 345555542233456678999999999 4566777877665 455544332 1
Q ss_pred ---C-CHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH--HHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 238 ---K-KEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV--EQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 238 ---~-~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i--~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
+ ...++=.+++++.-|.. .++..+.+.+.+++ ..|+..++.. .-.++...++.+|.+++...
T Consensus 236 ~~~~~~~Ql~Y~~ll~iWlLSF-~~~~~~~l~~~~i~~~~~L~~i~k~s--~KEKvvRv~la~l~Nll~~~ 303 (480)
T 1ho8_A 236 NSNHLGIQLQYHSLLLIWLLTF-NPVFANELVQKYLSDFLDLLKLVKIT--IKEKVSRLCISIILQCCSTR 303 (480)
T ss_dssp ---CCHHHHHHHHHHHHHHHTT-SHHHHHHHHTTSHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHTTSSS
T ss_pred cCCCccHHHHHHHHHHHHHHHc-CHHHHHHHHhcchHHHHHHHHHHHhh--ccchhHHHHHHHHHHHhccc
Confidence 1 36778888998887766 45677788877754 5677777654 15788888999999999876
No 90
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=96.75 E-value=0.057 Score=53.59 Aligned_cols=125 Identities=12% Similarity=0.140 Sum_probs=99.2
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHH
Q psy14164 153 SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLL 232 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv 232 (361)
++...+..|+..|......-|..++.. +..++.|... .+..||+.|+-.|..+|++ .....+ ..+|+
T Consensus 40 g~~k~K~LaaQ~I~kffk~FP~l~~~A-----i~a~lDLcED-ed~~IR~qaik~Lp~~ck~--~~i~ki-----aDvL~ 106 (507)
T 3u0r_A 40 GGTKEKRLAAQFIPKFFKHFPELADSA-----INAQLDLCED-EDVSIRRQAIKELPQFATG--ENLPRV-----ADILT 106 (507)
T ss_dssp SCHHHHHHHHHHHHHHGGGCGGGHHHH-----HHHHHHHHTC-SSHHHHHHHHHHGGGGCCT--TCHHHH-----HHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhChhhHHHH-----HHHHHHHHhc-ccHHHHHHHHHhhHHHhhh--hhhhhH-----HHHHH
Confidence 468999999999999999999998874 6678999985 6889999999999999997 333333 45889
Q ss_pred HhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 233 RCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 233 ~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
++|++.+..-..-+-..+..|...++. +.+..|...+.++ +..+||+++..|..-+..
T Consensus 107 QlLqtdd~~E~~~V~~sL~sllk~Dpk--------~tl~~lf~~i~~~---~e~~Rer~lkFi~~kl~~ 164 (507)
T 3u0r_A 107 QLLQTDDSAEFNLVNNALLSIFKMDAK--------GTLGGLFSQILQG---EDIVRERAIKFLSTKLKT 164 (507)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHCHH--------HHHHHHHHHHHHS---CHHHHHHHHHHHHHHGGG
T ss_pred HHHhccchHHHHHHHHHHHHHHhcChH--------HHHHHHHHHHccc---chHHHHHHHHHHHHHHhh
Confidence 999998877777777777777776653 4566666666667 889999999988766654
No 91
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=96.73 E-value=0.026 Score=50.89 Aligned_cols=145 Identities=18% Similarity=0.292 Sum_probs=101.6
Q ss_pred cCcccHHHHHHCCCHHHHHHhhcC----C-------CHHHHHHHHHHHHHHhhcCHHHHHHHHh-cChHHHHHHhhccCC
Q psy14164 129 CSIDYANDFLKMGGLPVLQPLLEG----S-------DPELRWRAAETVADIVQNNPFSQNFIIQ-TDFLNLLLTSIEHDS 196 (361)
Q Consensus 129 e~idna~~~~~~Gg~~~Lv~LL~s----~-------~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~-~g~l~~Ll~LL~~~~ 196 (361)
..+++-..| ..||+..|+.+|.. + +..+...++.||..+. |+...-+.+++ .+++..|...|.+ +
T Consensus 32 ~~~~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalm-n~~~G~~~vl~~~~~i~~l~~~L~s-~ 108 (233)
T 2f31_A 32 NPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEEGILLLVRAMDP-A 108 (233)
T ss_dssp SCHHHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHT-SSHHHHHHHHTSSSHHHHHHTTCCT-T
T ss_pred CCcHHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHh-CChHHHHHHHcCcHHHHHHHHHhCC-C
Confidence 356777888 57889888887752 1 4577888999999887 55555555554 4689999999986 6
Q ss_pred CHHHHHHHHHHHHHHhcCCh-hh-HHHHH----------hhCcHHHHHHhhcc-CCHHHHHHHHHHHHHHhcCCc-----
Q psy14164 197 NTTVQVKSLYAVSCLVRENE-EC-LKEFI----------KRDGFSVLLRCIQS-KKEKLVIKSCFLIACLCTDNN----- 258 (361)
Q Consensus 197 ~~~v~~~Al~ALS~l~r~~~-~~-~~~f~----------~~ggi~~Lv~lL~s-~~~~v~~kA~~ll~~L~~~~~----- 258 (361)
...+|+.++--|+.+|.-.. .+ ...++ +..-+..+++.|.+ .+...+..+..+|..|+.+.+
T Consensus 109 ~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~~~m~lIN~li~~~~dl~~R 188 (233)
T 2f31_A 109 VPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFR 188 (233)
T ss_dssp SHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHHHHHHHhcCChHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 77999999888887776432 12 22222 12246678888874 578889989999999988744
Q ss_pred -hHHHHHHhCCcHHHHHHh
Q psy14164 259 -QVKQVLLSMGMVEQMCVL 276 (361)
Q Consensus 259 -~~~~~l~~~g~i~~Lv~l 276 (361)
..|..+...|+.+.+-.+
T Consensus 189 ~~lR~ef~~~Gl~~il~~l 207 (233)
T 2f31_A 189 VHIRSELMRLGLHQVLQEL 207 (233)
T ss_dssp HHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHCChHHHHHHH
Confidence 346677777876655544
No 92
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=96.65 E-value=0.006 Score=66.67 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=92.5
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccC----CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcH
Q psy14164 153 SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHD----SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGF 228 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~----~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi 228 (361)
.+-..++.++|++|.++.+-..-+..-.=..++|.|+.++.+. ....++..++|.||..++--. .-..++ ...+
T Consensus 465 ~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~-~~~~~L-~~vl 542 (1023)
T 4hat_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLK-AHWNFL-RTVI 542 (1023)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHH-HCHHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHh-ccHHHH-HHHH
Confidence 5789999999999999976433222211134788899988641 223455678899998765211 111222 3445
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHh------CCcHHHHHH----hccCCCCCChhHHHHHHHHHHHH
Q psy14164 229 SVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLS------MGMVEQMCV----LIDIEDALDTEMNEHLLSALASL 298 (361)
Q Consensus 229 ~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~------~g~i~~Lv~----lL~~~~~~d~~~~e~al~aL~~L 298 (361)
..|++.|..++++++..||+++.+|+.. .+..++. ..+++.++. .+..- +..-+..+..++..+
T Consensus 543 ~~L~~~l~~~~~~v~~~A~~al~~l~~~---c~~~l~~~~~~e~~p~~~~il~~l~~~~~~l---~~~~~~~lyeai~~v 616 (1023)
T 4hat_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQK---CKYHFVIQQPRESEPFIQTIIRDIQKTTADL---QPQQVHTFYKACGII 616 (1023)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHH---HTHHHHSCCTTCSSCHHHHHHHTHHHHHTTS---CHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHH---HHHHhhccCCCCCchhHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 6677888778899999999999999974 2333331 123444443 33333 566778889999999
Q ss_pred HhcCh
Q psy14164 299 IKDSP 303 (361)
Q Consensus 299 ~~~~~ 303 (361)
++..|
T Consensus 617 i~~~~ 621 (1023)
T 4hat_C 617 ISEER 621 (1023)
T ss_dssp HTTCC
T ss_pred HHhCC
Confidence 88765
No 93
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=96.63 E-value=0.24 Score=48.01 Aligned_cols=149 Identities=18% Similarity=0.286 Sum_probs=105.4
Q ss_pred cCcccHHHHHHCCCHHHHHHhhcC-----------CCHHHHHHHHHHHHHHhhcCHHHHHHHHh-cChHHHHHHhhccCC
Q psy14164 129 CSIDYANDFLKMGGLPVLQPLLEG-----------SDPELRWRAAETVADIVQNNPFSQNFIIQ-TDFLNLLLTSIEHDS 196 (361)
Q Consensus 129 e~idna~~~~~~Gg~~~Lv~LL~s-----------~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~-~g~l~~Ll~LL~~~~ 196 (361)
..+++-..|. .+|+..|+.+|.. .+..+...++.||..+. |+...-+.++. .+++..|...|.+ +
T Consensus 36 ~~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalm-N~~~Gl~~vl~~~~~i~~l~~sL~s-~ 112 (386)
T 2bnx_A 36 NPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFM-NNKFGIKTMLETEEGILLLVRAMDP-A 112 (386)
T ss_dssp SCHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHT-SSHHHHHHHHHSSSHHHHHHHTCCT-T
T ss_pred CCcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHh-CCHHHHHHHHcCcHHHHHHHHHhCC-C
Confidence 3567778886 6888888887742 14577888999999887 45544445554 4789999999986 5
Q ss_pred CHHHHHHHHHHHHHHhcCCh-hh-HHHHH----------hhCcHHHHHHhhc-cCCHHHHHHHHHHHHHHhcCCc-----
Q psy14164 197 NTTVQVKSLYAVSCLVRENE-EC-LKEFI----------KRDGFSVLLRCIQ-SKKEKLVIKSCFLIACLCTDNN----- 258 (361)
Q Consensus 197 ~~~v~~~Al~ALS~l~r~~~-~~-~~~f~----------~~ggi~~Lv~lL~-s~~~~v~~kA~~ll~~L~~~~~----- 258 (361)
...+++.++--|+.+|--.. .+ ...++ +..-+..|++.|. +.+...+..+..+|..|+.+.+
T Consensus 113 ~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~lIN~lv~~~~dl~~R 192 (386)
T 2bnx_A 113 VPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFR 192 (386)
T ss_dssp SHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred CchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 67888888888887776432 12 22222 2234667888887 4578999999999999998755
Q ss_pred -hHHHHHHhCCcHHHHHHhccCC
Q psy14164 259 -QVKQVLLSMGMVEQMCVLIDIE 280 (361)
Q Consensus 259 -~~~~~l~~~g~i~~Lv~lL~~~ 280 (361)
..|..|...|+.+.+-.+=...
T Consensus 193 ~~LR~Ef~~~GL~~il~~Lr~~~ 215 (386)
T 2bnx_A 193 VHIRSELMRLGLHQVLQELREIE 215 (386)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCC
T ss_pred HHHHHHHHHCChHHHHHHHhccC
Confidence 4577888889887766553333
No 94
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=96.55 E-value=0.038 Score=59.59 Aligned_cols=144 Identities=8% Similarity=0.115 Sum_probs=84.7
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhc-----ChHHH----HHHhhccC--CCHHHHHHHHHHHHHHhcCChhhHH
Q psy14164 152 GSDPELRWRAAETVADIVQNNPFSQNFIIQT-----DFLNL----LLTSIEHD--SNTTVQVKSLYAVSCLVRENEECLK 220 (361)
Q Consensus 152 s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~-----g~l~~----Ll~LL~~~--~~~~v~~~Al~ALS~l~r~~~~~~~ 220 (361)
+++...|..|..++|.++.+...+.. .... ...+. ++..|.+. ..+-+|..|+|+|+.++...++
T Consensus 416 ~~~w~~reaal~algaia~~~~~~~~-~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~~--- 491 (960)
T 1wa5_C 416 SKNWKFKDLYIYLFTALAINGNITNA-GVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTK--- 491 (960)
T ss_dssp --CHHHHHHHHHHHHHHHBSSCCBTT-BCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCH---
T ss_pred chhHHHHHHHHHHHHHHHHHhccccC-CcccccccccHHHHHHHHhHHHhcCCCCCCceehHHHHHHHHHHHhhCCH---
Confidence 56778999999999999864211100 0000 12222 23334432 2689999999999998875432
Q ss_pred HHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-C------chH-HHHHHh--CCcHHHHHHhccCCCC--CChhHH
Q psy14164 221 EFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-N------NQV-KQVLLS--MGMVEQMCVLIDIEDA--LDTEMN 288 (361)
Q Consensus 221 ~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~------~~~-~~~l~~--~g~i~~Lv~lL~~~~~--~d~~~~ 288 (361)
.+. ...++.++..|.+++.+|+..||+++.+|+.. + +.. +..+.. ..++..|..++....+ ......
T Consensus 492 ~~l-~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~ 570 (960)
T 1wa5_C 492 AQL-IELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAEN 570 (960)
T ss_dssp HHH-HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSC
T ss_pred HHH-HHHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccHHHhhhhHHHHHHHHHHHHHhccCCCCccccc
Confidence 222 34678888999888999999999999999874 1 111 111110 1345566666665300 001123
Q ss_pred HHHHHHHHHHHh
Q psy14164 289 EHLLSALASLIK 300 (361)
Q Consensus 289 e~al~aL~~L~~ 300 (361)
+.++.+|..++.
T Consensus 571 e~l~~al~~vv~ 582 (960)
T 1wa5_C 571 EFLMRSIFRVLQ 582 (960)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666666654
No 95
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=96.46 E-value=0.31 Score=45.63 Aligned_cols=229 Identities=14% Similarity=0.149 Sum_probs=138.7
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCCCcccccCCCCHHhHHHHHHHHHhhc-----CCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy14164 46 PSNLQDLLRYAVEAGSRSRAQEAPNINRAASMNEANRGFLLDALNSMM-----VNVGAELEKIIKTLKENQDQKDICIGA 120 (361)
Q Consensus 46 ~~~l~~LL~w~~~~s~~~~~~~~~~~~~~~~~s~e~~~~L~eal~~~~-----~~~~~~mk~~l~~L~~~~~~~~~~~~A 120 (361)
..|++++++=-.|-.... ++ . ..+++++..-|.+.+..+. ......+.-..+++ ....+.+..+
T Consensus 54 ~an~~~i~~KL~EfN~~~--~~-----~-~~Ls~~el~~L~~l~~~l~~~s~~~~~~~~l~~l~kil---~WP~~~~fPv 122 (304)
T 3ebb_A 54 QANPTQILGKLKELNGTA--PE-----E-KKLTEDDLILLEKILSLICNSSSEKPTVQQLQILWKAI---NCPEDIVFPA 122 (304)
T ss_dssp CCCHHHHHHHHHHHHTTS--CG-----G-GCCCHHHHHHHHHHHHHHHTTCSSCCCHHHHHHHHHHH---TSCTTTCHHH
T ss_pred ccCHHHHHHHHHHHHHcc--cc-----c-cCcCHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHH---cCCHHhHHHH
Confidence 456776666655543221 11 1 2599999999998887654 11122233333333 3556788899
Q ss_pred HHHHHHhhcCcccHHHHHHCCCHHHHH----Hhhc-CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhc--ChHHHHHHhhc
Q psy14164 121 LDNLSDYICSIDYANDFLKMGGLPVLQ----PLLE-GSDPELRWRAAETVADIVQNNPFSQNFIIQT--DFLNLLLTSIE 193 (361)
Q Consensus 121 l~~L~~lve~idna~~~~~~Gg~~~Lv----~LL~-s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~--g~l~~Ll~LL~ 193 (361)
+|-|.-++-+.+-+..|+..+.-..++ ..+. ...+..+..++++++|+..+. ..++.++.. .+++.+...+.
T Consensus 123 LDLlRl~~l~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~~-~g~~~l~~~~~~il~~~~~~~~ 201 (304)
T 3ebb_A 123 LDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVGQ-AGQKLMMSQRESLMSHAIELKS 201 (304)
T ss_dssp HHHHHHHTTSHHHHHHHHSTTTHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGSH-HHHHHHHHTHHHHHHHHHGGGS
T ss_pred HHHHHHHHcCccHHHHhhccccchHHHHHHHHhcCCCCChHHHHHHHHHHHHccCCc-hhHHHHHHHHHHHHHHHHHHhc
Confidence 999988887666555565443333343 3332 245667999999999999754 455555542 24444555544
Q ss_pred cCCCHHHHHHHHHHHHHHhcCChh--hHHHHHhhCcHHHHHHhhcc-CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH
Q psy14164 194 HDSNTTVQVKSLYAVSCLVRENEE--CLKEFIKRDGFSVLLRCIQS-KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV 270 (361)
Q Consensus 194 ~~~~~~v~~~Al~ALS~l~r~~~~--~~~~f~~~ggi~~Lv~lL~s-~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i 270 (361)
. .+..+|..++..+-|++..... ....-. -.+..+..++.. .+....-+++-++.+|+..+.+.++.....|+-
T Consensus 202 ~-~nknl~iA~ATl~~NlAv~~~~~~~~~~~~--~ll~~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~ 278 (304)
T 3ebb_A 202 G-SNKNIHIALATLALNYSVCFHKDHNIEGKA--QCLSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVD 278 (304)
T ss_dssp S-CCHHHHHHHHHHHHHHHHHHHHSCCHHHHH--HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred C-CChhHHHHHHHHHHHHHHHHhhcCCchHHH--HHHHHHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHH
Confidence 3 5778998888888777642110 001100 123344444543 488999999999999998877777777777777
Q ss_pred HHHHHhccCCCCCChhHHHHH
Q psy14164 271 EQMCVLIDIEDALDTEMNEHL 291 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~a 291 (361)
..+-......+ ..++.+.+
T Consensus 279 ~~v~~~~~~~~--~~kv~~~~ 297 (304)
T 3ebb_A 279 SQIKKYSSVSE--PAKVSECC 297 (304)
T ss_dssp HHGGGGGGCCS--SHHHHHHH
T ss_pred HHHHHHHhCCC--chhHHHHH
Confidence 66666665531 44555543
No 96
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=96.20 E-value=0.042 Score=58.81 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=92.9
Q ss_pred cCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc--CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcH
Q psy14164 151 EGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH--DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGF 228 (361)
Q Consensus 151 ~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~--~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi 228 (361)
.+++...+..|++++|.++.+-... ....++.++..+.. +.++.+|..++|+|+..+...... ..++ ...+
T Consensus 459 ~~~~w~~~eaal~al~~i~~~~~~~-----~~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~-~~~l-~~vl 531 (963)
T 2x19_B 459 EPYSWQHTEALLYGFQSIAETIDVN-----YSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADH-PVMI-NSVL 531 (963)
T ss_dssp CSCCHHHHHHHHHHHHHHTTSCCSS-----CCSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHC-HHHH-TTTH
T ss_pred CCCchHHHHHHHHHHHHHHhhcCch-----hhHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhC-HHHH-HHHH
Confidence 5667889999999999999764321 12334444443321 135789999999999987632221 1343 4678
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHHHhcCCchH-HHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcCh
Q psy14164 229 SVLLRCIQSKKEKLVIKSCFLIACLCTDNNQV-KQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 229 ~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~-~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~ 303 (361)
+.|+..|++ .+|+..|++++.+|+...... ..++ ..++..|..++... ..+...++.++.++..++...+
T Consensus 532 ~~l~~~l~~--~~V~~~A~~al~~l~~~~~~~l~p~~--~~il~~l~~~l~~~-~~~~~~~~~~~eai~~i~~~~~ 602 (963)
T 2x19_B 532 PLVLHALGN--PELSVSSVSTLKKICRECKYDLPPYA--ANIVAVSQDVLMKQ-IHKTSQCMWLMQALGFLLSALQ 602 (963)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHHTGGGCTTTH--HHHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHhccC-CCChHHHHHHHHHHHHHHhcCC
Confidence 888888864 799999999999999643221 1111 13444555666643 1256789999999999987553
No 97
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=96.15 E-value=0.045 Score=58.79 Aligned_cols=138 Identities=9% Similarity=0.075 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhh---c-cCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcH
Q psy14164 153 SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSI---E-HDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGF 228 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL---~-~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi 228 (361)
++...++.|+.++|.++.+-+... ...++.++.++ . ++.++.||..++|+|+.++....... .++ ...+
T Consensus 476 ~~w~~~eaal~~l~~iae~~~~~~-----~~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~-~~l-~~vl 548 (971)
T 2x1g_F 476 THWTKLEACIYSFQSVAEHFGGEE-----KRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENP-AYI-PPAI 548 (971)
T ss_dssp TCCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC-----CH-HHHH
T ss_pred CcHHHHHHHHHHHHHHHhhcChhh-----hHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCH-HHH-HHHH
Confidence 566789999999999987654322 13344444433 2 23467999999999999875311111 122 2345
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 229 SVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 229 ~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
+.|+..|. .+|+..|++++.+|+........... ..++..+..++..+ ..+.+.++.++.++..++...
T Consensus 549 ~~l~~~l~---~~v~~~A~~al~~l~~~~~~~l~p~~-~~ll~~l~~~l~~~-~~~~~~~~~~~~ai~~i~~~~ 617 (971)
T 2x1g_F 549 NLLVRGLN---SSMSAQATLGLKELCRDCQLQLKPYA-DPLLNACHASLNTG-RMKNSDSVRLMFSIGKLMSLL 617 (971)
T ss_dssp HHHHHHHH---SSCHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHHHHST-TSCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhC---hHHHHHHHHHHHHHHHHHHHhccccH-HHHHHHHHHHHcCC-CCChHHHHHHHHHHHHHHHhC
Confidence 67777773 78999999999999965332221111 24566666777763 125788999999999998754
No 98
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=96.04 E-value=0.16 Score=46.32 Aligned_cols=195 Identities=14% Similarity=0.180 Sum_probs=125.8
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCccc-HHHH-HHCCCHHHHHHh-------hcCCC----HHHH-HHHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDY-ANDF-LKMGGLPVLQPL-------LEGSD----PELR-WRAAET 164 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idn-a~~~-~~~Gg~~~Lv~L-------L~s~~----~~vr-~~Aa~~ 164 (361)
.+.+.+..|.++ +.++.|+-+|..--|+... |--+ +.-|.+..|++= |..+. ..-| ..|+.+
T Consensus 4 ~i~qli~~L~~p----~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaL 79 (268)
T 2fv2_A 4 KIYQWINELSSP----ETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALAL 79 (268)
T ss_dssp HHHHHHHHTSST----TTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCc----hhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHH
Confidence 344445555554 4688888888887766543 3333 344556666542 22111 1223 223333
Q ss_pred HHHHhhcCHHHHHHHHhcChHHHHHHhhccC----CCHHHHHHHHHHHHHHhcCChh-hHHHHHhhCcHHHHHHhhccCC
Q psy14164 165 VADIVQNNPFSQNFIIQTDFLNLLLTSIEHD----SNTTVQVKSLYAVSCLVRENEE-CLKEFIKRDGFSVLLRCIQSKK 239 (361)
Q Consensus 165 Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~----~~~~v~~~Al~ALS~l~r~~~~-~~~~f~~~ggi~~Lv~lL~s~~ 239 (361)
+-.+| .+|+.+..|++++..-.|...|+.. +-+.+|-.++..|++++....+ ...-++....+|...+.|..++
T Consensus 80 lQcvA-shpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~Gs 158 (268)
T 2fv2_A 80 LQCVA-SHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGS 158 (268)
T ss_dssp HHHHH-HCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSC
T ss_pred HHHHH-cCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 33344 6899999999998766666666542 2257999999999999986544 4444456788999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHH-------H-HhCCcHHHHHHhc-cCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 240 EKLVIKSCFLIACLCTDNNQVKQV-------L-LSMGMVEQMCVLI-DIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 240 ~~v~~kA~~ll~~L~~~~~~~~~~-------l-~~~g~i~~Lv~lL-~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
+-.|.-|.|.+..+...+. ...+ + .=..++..++.-| ..+ +..+..++.++-..|..+.
T Consensus 159 elSKtvAtfIlqKIL~dd~-GL~YiC~t~eRF~av~~vL~~mV~~l~~~p---s~RLLKhiircYlRLsdn~ 226 (268)
T 2fv2_A 159 ELSKTVATFILQKILLDDT-GLAYICQTYERFSHVAMILGKMVLQLSKEP---SARLLKHVVRCYLRLSDNP 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHSHH-HHHHHTSSHHHHHHHHHHHHHHHHHTTTSC---CHHHHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHhccch-hHHHHHccHHHHHHHHHHHHHHHHHHhcCC---ChHHHHHHHHHHHHHhcCH
Confidence 9999999999999987542 1111 1 1112444444433 344 7888899999988887654
No 99
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=95.78 E-value=0.12 Score=51.48 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhhcCc-cc----HHHHHHCCCHHHHHHhhcC---CCHHHHHHHHHHHHHHhhc----------------
Q psy14164 116 ICIGALDNLSDYICSI-DY----ANDFLKMGGLPVLQPLLEG---SDPELRWRAAETVADIVQN---------------- 171 (361)
Q Consensus 116 ~~~~Al~~L~~lve~i-dn----a~~~~~~Gg~~~Lv~LL~s---~~~~vr~~Aa~~Lg~iaqn---------------- 171 (361)
..--++..|..+++.. ++ ...++-.|..++++..|.. +++++...--.+...+-++
T Consensus 288 vvRv~la~l~Nll~~~~~~~~~~~~~~~~~~~~l~~l~~L~~rk~~Dedl~edl~~L~e~L~~~~~~ltsfDeY~~El~s 367 (480)
T 1ho8_A 288 VSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDS 367 (480)
T ss_dssp HHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccchhhhhHHHHHHHHccchHHHHHHhhCCCCcHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhc
Confidence 3344566777777643 11 1223322444667776654 6777776544443333222
Q ss_pred -----CHHHHH-HHH----------hcChHHHHHHhhcc---------CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhC
Q psy14164 172 -----NPFSQN-FII----------QTDFLNLLLTSIEH---------DSNTTVQVKSLYAVSCLVRENEECLKEFIKRD 226 (361)
Q Consensus 172 -----n~~~q~-~v~----------~~g~l~~Ll~LL~~---------~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~g 226 (361)
.|..+. .|- +..++..|+++|.+ +.++.+..-||+=|+..+|++|.+...+-+.|
T Consensus 368 G~L~WSP~H~se~FW~ENa~kf~e~~~~llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg 447 (480)
T 1ho8_A 368 KLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTG 447 (480)
T ss_dssp TCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHS
T ss_pred CCcccCCCccchhHHHHHHHHHHhcchHHHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcC
Confidence 222221 111 12378899999974 24678889999999999999999988888899
Q ss_pred cHHHHHHhhccCCHHHHHHHHHHHHHHhc
Q psy14164 227 GFSVLLRCIQSKKEKLVIKSCFLIACLCT 255 (361)
Q Consensus 227 gi~~Lv~lL~s~~~~v~~kA~~ll~~L~~ 255 (361)
|=..++++|.++|..||..|..++.-+..
T Consensus 448 ~K~~VM~Lm~h~d~~Vr~~AL~avQklm~ 476 (480)
T 1ho8_A 448 GKADIMELLNHSDSRVKYEALKATQAIIG 476 (480)
T ss_dssp HHHHHHHHTSCSSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887754
No 100
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=95.68 E-value=0.76 Score=49.75 Aligned_cols=170 Identities=17% Similarity=0.205 Sum_probs=121.5
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHH-HC-CCHHHHHHhhcCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHhcChHHHH
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFL-KM-GGLPVLQPLLEGSDPELRWRAAETVADIVQ--NNPFSQNFIIQTDFLNLL 188 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~-~~-Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaq--nn~~~q~~v~~~g~l~~L 188 (361)
.=..|+.||..|..+++.. ...+. .+ ..+|.+..++-...++|+.+|..++..+|+ .|... ...+|.|
T Consensus 147 kw~~k~~~l~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~------~~~~~~~ 218 (986)
T 2iw3_A 147 KWQEKIAILAAFSAMVDAA--KDQVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDI------ERFIPSL 218 (986)
T ss_dssp CHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTT------GGGHHHH
T ss_pred chHHHHHHHHHHHHHHHHh--HHHHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcch------hhhHHHH
Confidence 3589999999999999754 22221 11 236777777888999999999999999886 34332 2479999
Q ss_pred HHhhccCCCHHHHHHHHHHHHHHhcCC--hhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC--CchHHHHH
Q psy14164 189 LTSIEHDSNTTVQVKSLYAVSCLVREN--EECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD--NNQVKQVL 264 (361)
Q Consensus 189 l~LL~~~~~~~v~~~Al~ALS~l~r~~--~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~--~~~~~~~l 264 (361)
++.+.+ ++ . ..+++..||+.+--. ....-+++ +|.|.+.|......++++++-.+-|+|.- +|.....|
T Consensus 219 ~~~~~~-p~-~-~~~~~~~l~~~tfv~~v~~~~l~~~----~p~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f 291 (986)
T 2iw3_A 219 IQCIAD-PT-E-VPETVHLLGATTFVAEVTPATLSIM----VPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPF 291 (986)
T ss_dssp HHHHHC-TT-H-HHHHHHHHTTCCCCSCCCHHHHHHH----HHHHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHhcC-hh-h-hHHHHHHhhcCeeEeeecchhHHHH----HHHHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhh
Confidence 999986 33 3 567889998754321 12223333 68888899888999999999999999974 66555555
Q ss_pred HhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 265 LSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 265 ~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
+ -.++|.+-.....- .++++|+.+-+|+..|..
T Consensus 292 ~-~~l~p~~~~~~~~~--~~pe~r~~~~~a~~~l~~ 324 (986)
T 2iw3_A 292 L-GKLLPGLKSNFATI--ADPEAREVTLRALKTLRR 324 (986)
T ss_dssp H-TTTHHHHHHHTTTC--CSHHHHHHHHHHHHHHHH
T ss_pred h-hhhhhHHHHHhhcc--CCHHHHHHHHHHHHHHHH
Confidence 4 34566666555443 389999999999888854
No 101
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=95.64 E-value=0.99 Score=49.36 Aligned_cols=158 Identities=14% Similarity=0.118 Sum_probs=94.7
Q ss_pred HHHHHHhhcC----CCHHHHHHHHHHHHHHhhc----CHHHHHHHHhcChHHHHHHh----hccCCCHHHHHHHHHHHHH
Q psy14164 143 LPVLQPLLEG----SDPELRWRAAETVADIVQN----NPFSQNFIIQTDFLNLLLTS----IEHDSNTTVQVKSLYAVSC 210 (361)
Q Consensus 143 ~~~Lv~LL~s----~~~~vr~~Aa~~Lg~iaqn----n~~~q~~v~~~g~l~~Ll~L----L~~~~~~~v~~~Al~ALS~ 210 (361)
+..+..++.+ .++.+|..|.-++|+++.. ++.|.. ..++.+..+ +.. .+..-+..++.||+|
T Consensus 393 l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~~c~~-----~~v~~i~~~l~~~~~~-~~~~~~~~~LkaLGN 466 (1056)
T 1lsh_A 393 LSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPD-----ELLQPLHDLLSQSSDR-AKEEEIVLALKALGN 466 (1056)
T ss_dssp HHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCCG-----GGTHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCCCCCH-----HHHHHHHHHHHHHHhc-CChHHHHHHHHHhhc
Confidence 4445556665 4678899899999888742 222221 234555444 444 456778899999999
Q ss_pred HhcCChhhHHHHHhhCcHHHHHHhhc-------cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCC
Q psy14164 211 LVRENEECLKEFIKRDGFSVLLRCIQ-------SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDAL 283 (361)
Q Consensus 211 l~r~~~~~~~~f~~~ggi~~Lv~lL~-------s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~ 283 (361)
+- ++. .++.|..++. +...++|..|++++..+....|...+ +.+..++.+. ..
T Consensus 467 ~g--~p~---------~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~~v~--------~il~~i~~n~-~e 526 (1056)
T 1lsh_A 467 AG--QPN---------SIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQ--------EIVLPIFLNV-AI 526 (1056)
T ss_dssp HT--CGG---------GHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHHHH--------HHHHHHHHCT-TS
T ss_pred cC--Chh---------HHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchHHHH--------HHHHHHhcCC-CC
Confidence 83 453 3455555553 23679999999999999876654332 2344555322 12
Q ss_pred ChhHHHHHHHHHHHHHhcChHH--H-----HhhccCcchHHHHHHHHHHhhcC
Q psy14164 284 DTEMNEHLLSALASLIKDSPEA--Q-----SLCRLEPLNLKFKLNFIKEKHAG 329 (361)
Q Consensus 284 d~~~~e~al~aL~~L~~~~~~~--~-----~~~~~~~l~l~~~Le~~~~~l~~ 329 (361)
+.++|..|+..| ...+|.. + ..-..+.......+..+++.+.+
T Consensus 527 ~~EvRiaA~~~L---m~t~P~~~~l~~ia~~l~~E~~~QV~sfv~S~l~sla~ 576 (1056)
T 1lsh_A 527 KSELRIRSCIVF---FESKPSVALVSMVAVRLRREPNLQVASFVYSQMRSLSR 576 (1056)
T ss_dssp CHHHHHHHHHHH---HHTCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHH---HHHCcCHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHh
Confidence 788888877766 3333421 1 11233444555666666766654
No 102
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=95.49 E-value=0.069 Score=58.13 Aligned_cols=143 Identities=11% Similarity=0.051 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc----CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcH
Q psy14164 153 SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH----DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGF 228 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~----~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi 228 (361)
.+...++.|++++|.++.........-+-..+++.|+.+... ++.+.++..++|+++..++-.... ..++ ...+
T Consensus 465 ~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~-~~~l-~~vl 542 (1049)
T 3m1i_C 465 WSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAH-WNFL-RTVI 542 (1049)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHC-HHHH-HHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCchhhHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhH-HHHH-HHHH
Confidence 567889999999999986543321111111245555554332 123345557899999776421111 1233 2456
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHh----------CCcHHHHHHhccCCCCCChhHHHHHHHHHHHH
Q psy14164 229 SVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLS----------MGMVEQMCVLIDIEDALDTEMNEHLLSALASL 298 (361)
Q Consensus 229 ~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~----------~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L 298 (361)
+.|+..|.+++.+|+..||+++.+|+... +..+.. ..++..+..++..- +.+-...+..++..+
T Consensus 543 ~~ll~~l~~~~~~V~~~A~~al~~l~~~~---~~~l~~~~~~~~~p~~~~il~~l~~~~~~~---~~~~~~~~~eai~~i 616 (1049)
T 3m1i_C 543 LKLFEFMHETHEGVQDMACDTFIKIVQKC---KYHFVIQQPRESEPFIQTIIRDIQKTTADL---QPQQVHTFYKACGII 616 (1049)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHH---THHHHSCCTTCSSCHHHHHHHTHHHHHTTS---CHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHH---HHHhhcccCCCCCcHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 77888888889999999999999999742 222220 12333344444444 455567778888888
Q ss_pred HhcCh
Q psy14164 299 IKDSP 303 (361)
Q Consensus 299 ~~~~~ 303 (361)
+...+
T Consensus 617 i~~~~ 621 (1049)
T 3m1i_C 617 ISEER 621 (1049)
T ss_dssp HHTCC
T ss_pred HHcCC
Confidence 76544
No 103
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=95.47 E-value=0.17 Score=54.24 Aligned_cols=131 Identities=14% Similarity=0.139 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHh---hc--CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHH
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPL---LE--GSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLL 189 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~L---L~--s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll 189 (361)
..+..|+-.|..+.+....... ..++.++.+ |. .+++.||..|+|+||..+.--....+.+ ..+++.|+
T Consensus 479 ~~~eaal~~l~~iae~~~~~~~----~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l--~~vl~~l~ 552 (971)
T 2x1g_F 479 TKLEACIYSFQSVAEHFGGEEK----RQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYI--PPAINLLV 552 (971)
T ss_dssp HHHHHHHHHHHHTTTC----------CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcChhhh----HHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHH
Confidence 5677777777776665432211 223444433 23 2489999999999999874211111111 13667777
Q ss_pred HhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC--CHHHHHHHHHHHHHHhcC
Q psy14164 190 TSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK--KEKLVIKSCFLIACLCTD 256 (361)
Q Consensus 190 ~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~--~~~v~~kA~~ll~~L~~~ 256 (361)
..|. +.|+..|++|+.++++........++ ...+..|..++.++ +.+.+..+..+|..++..
T Consensus 553 ~~l~----~~v~~~A~~al~~l~~~~~~~l~p~~-~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~~ 616 (971)
T 2x1g_F 553 RGLN----SSMSAQATLGLKELCRDCQLQLKPYA-DPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSL 616 (971)
T ss_dssp HHHH----SSCHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHhC----hHHHHHHHHHHHHHHHHHHHhccccH-HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHh
Confidence 7773 36899999999999987765554444 34566777777773 688999999999988875
No 104
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=95.32 E-value=0.45 Score=50.78 Aligned_cols=177 Identities=15% Similarity=0.121 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhh---cCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHH
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLL---EGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLL 189 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL---~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll 189 (361)
+-..+..++-.|..+.+...... ..-++.++..| .++++.||..++|+||..+.--....+ ++ ..+++.|+
T Consensus 462 ~w~~~eaal~al~~i~~~~~~~~----~~~l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~~-~l-~~vl~~l~ 535 (963)
T 2x19_B 462 SWQHTEALLYGFQSIAETIDVNY----SDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPV-MI-NSVLPLVL 535 (963)
T ss_dssp CHHHHHHHHHHHHHHTTSCCSSC----CSHHHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCHH-HH-TTTHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCchh----hHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCHH-HH-HHHHHHHH
Confidence 34567777777777665543210 01133444432 346889999999999998753221122 23 36888899
Q ss_pred HhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC--CHHHHHHHHHHHHHHhcCCc-hHHHHHHh
Q psy14164 190 TSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK--KEKLVIKSCFLIACLCTDNN-QVKQVLLS 266 (361)
Q Consensus 190 ~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~--~~~v~~kA~~ll~~L~~~~~-~~~~~l~~ 266 (361)
..|.+ +.|+..|++||.++++........++ ...+..|..++.+. +.+.+..+..++..++..-+ +.....+
T Consensus 536 ~~l~~---~~V~~~A~~al~~l~~~~~~~l~p~~-~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~~~~~~~~- 610 (963)
T 2x19_B 536 HALGN---PELSVSSVSTLKKICRECKYDLPPYA-ANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNL- 610 (963)
T ss_dssp HHTTC---GGGHHHHHHHHHHHHHHTGGGCTTTH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCHHHHHHHH-
T ss_pred HHhCC---chHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCCHHHHHHHH-
Confidence 88864 57999999999999986554322222 23344555666652 67888888899999887543 3332222
Q ss_pred CCcHHHHHHhccC--CCCCChhHHH---HHHHHHHHHHh
Q psy14164 267 MGMVEQMCVLIDI--EDALDTEMNE---HLLSALASLIK 300 (361)
Q Consensus 267 ~g~i~~Lv~lL~~--~~~~d~~~~e---~al~aL~~L~~ 300 (361)
..+++++...+.. ....+.+.+. .++.+|..+..
T Consensus 611 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~l~~i~~ 649 (963)
T 2x19_B 611 HSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFT 649 (963)
T ss_dssp HHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2345555544431 0001333433 45555555554
No 105
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=95.23 E-value=1.2 Score=40.30 Aligned_cols=146 Identities=16% Similarity=0.102 Sum_probs=97.7
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHH--H-HHhcCh-HHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhh---
Q psy14164 146 LQPLLEGSDPELRWRAAETVADIVQNNPFSQN--F-IIQTDF-LNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEEC--- 218 (361)
Q Consensus 146 Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~--~-v~~~g~-l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~--- 218 (361)
|-.-|.|.+-..|..|..-|..+.++++.... . +...+- .+.+-+.+. |.+..+..+++.+|..++......
T Consensus 14 l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~-DsN~~v~~~al~~l~~~~~~~~~~~~~ 92 (278)
T 4ffb_C 14 LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYIT-DSNVVAQEQAIVALNSLIDAFASSSLK 92 (278)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTT-CSSHHHHHHHHHHHHHHHTTCC---CC
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 55778999999999999999998887654321 1 112233 344445665 678899999999999998753321
Q ss_pred --HHHHHhhCcHHHHHH-hhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHH
Q psy14164 219 --LKEFIKRDGFSVLLR-CIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSAL 295 (361)
Q Consensus 219 --~~~f~~~ggi~~Lv~-lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL 295 (361)
.....-...++.|+. +|.+...+++..|..++..++...... . .+++.++..+.+. ++.++..++..|
T Consensus 93 ~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~-~-----~~~e~l~~~l~~K---npkv~~~~l~~l 163 (278)
T 4ffb_C 93 NAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSI-T-----QSVELVIPFFEKK---LPKLIAAAANCV 163 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSS-H-----HHHHHHGGGGGCS---CHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcH-H-----HHHHHHHHHHhcc---CHHHHHHHHHHH
Confidence 111112344666664 688888999999988888776542111 1 1356677778887 999999999999
Q ss_pred HHHHhc
Q psy14164 296 ASLIKD 301 (361)
Q Consensus 296 ~~L~~~ 301 (361)
..++..
T Consensus 164 ~~~l~~ 169 (278)
T 4ffb_C 164 YELMAA 169 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 106
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=95.15 E-value=0.71 Score=42.13 Aligned_cols=167 Identities=16% Similarity=0.183 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHhcCC---CCH---HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCC-----HHHHHHHHHH
Q psy14164 96 VGAELEKIIKTLKENQ---DQK---DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSD-----PELRWRAAET 164 (361)
Q Consensus 96 ~~~~mk~~l~~L~~~~---~~~---~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~-----~~vr~~Aa~~ 164 (361)
-+-++++++.+...-+ -+. ...-.||.-|..+..+.+....|.+....-.|..+|+..+ .-+|-.++.+
T Consensus 46 ia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLlQcvAshpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGV 125 (268)
T 2fv2_A 46 IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGV 125 (268)
T ss_dssp HHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHHHHHHHCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHHHHHHcCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHH
Confidence 3567788877764332 222 3346777777888888999999999987777788886533 5799999999
Q ss_pred HHHHhh-cCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHH-------HHHhh-CcHHHHHH-h
Q psy14164 165 VADIVQ-NNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLK-------EFIKR-DGFSVLLR-C 234 (361)
Q Consensus 165 Lg~iaq-nn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~-------~f~~~-ggi~~Lv~-l 234 (361)
||.+++ +++++-..+++.+.+|..++.+..+ ++--|.-|.+-+..|.-+ ..+.. .|... ..+..++. +
T Consensus 126 IgaLvK~dd~eVi~fLL~tEiiplCLrime~G-selSKtvAtfIlqKIL~d-d~GL~YiC~t~eRF~av~~vL~~mV~~l 203 (268)
T 2fv2_A 126 IGALVKTDEQEVINFLLTTEIIPLCLRIMESG-SELSKTVATFILQKILLD-DTGLAYICQTYERFSHVAMILGKMVLQL 203 (268)
T ss_dssp HHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHS-HHHHHHHTSSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCcHHHHHHHHhhhHHHHHHHHHhhc-cHHHHHHHHHHHHHHhcc-chhHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 999997 4677888889999999999999984 668888899998888753 22322 22221 12333333 3
Q ss_pred hccCCHHHHHHHHHHHHHHhcCCchHHHHHH
Q psy14164 235 IQSKKEKLVIKSCFLIACLCTDNNQVKQVLL 265 (361)
Q Consensus 235 L~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~ 265 (361)
...++.++-+.+..+-..|+. ++..++.+.
T Consensus 204 ~~~ps~RLLKhiircYlRLsd-n~rar~aL~ 233 (268)
T 2fv2_A 204 SKEPSARLLKHVVRCYLRLSD-NPRAREALR 233 (268)
T ss_dssp TTSCCHHHHHHHHHHHHHHTT-SHHHHHHHH
T ss_pred hcCCChHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 345678888888877777654 455555544
No 107
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=95.09 E-value=4.7 Score=43.66 Aligned_cols=133 Identities=15% Similarity=0.124 Sum_probs=99.2
Q ss_pred HHHHHHHHHhhcCcccH--HHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccC
Q psy14164 118 IGALDNLSDYICSIDYA--NDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHD 195 (361)
Q Consensus 118 ~~Al~~L~~lve~idna--~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~ 195 (361)
+.|+..+..+++....+ -.-.-.+.++.++..+......||..|..++..++..-+... + ..++|.|+..|.+.
T Consensus 70 ~~a~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a--~--~~~~~~~~~~~~~~ 145 (986)
T 2iw3_A 70 ANAMQAVAHIANQSNLSPSVEPYIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVA--I--KALLPHLTNAIVET 145 (986)
T ss_dssp HHHHHHHHHHTCTTTCCTTTHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGG--H--HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHH--H--HHHHHHHHHHhccc
Confidence 77788888777544321 111223568888888888889999999999888887643322 1 34799999999865
Q ss_pred CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhc
Q psy14164 196 SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCT 255 (361)
Q Consensus 196 ~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~ 255 (361)
..=..+..|+..|..++...+.+ -...-...+|.+.+++.+.-..|+..|.-++..+|.
T Consensus 146 ~kw~~k~~~l~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~ 204 (986)
T 2iw3_A 146 NKWQEKIAILAAFSAMVDAAKDQ-VALRMPELIPVLSETMWDTKKEVKAAATAAMTKATE 204 (986)
T ss_dssp CCHHHHHHHHHHHHHHHHHSHHH-HHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGG
T ss_pred cchHHHHHHHHHHHHHHHHhHHH-HHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHh
Confidence 45588999999999999766543 333335689999999999999999998888888875
No 108
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=95.02 E-value=0.83 Score=49.81 Aligned_cols=168 Identities=10% Similarity=-0.014 Sum_probs=100.4
Q ss_pred HHHHHHHHhhc-CCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHhhcCcccH--HHHHHCCCHHHHHHhhcC---
Q psy14164 83 GFLLDALNSMM-VNVGAELEKIIKTLK----ENQDQKDICIGALDNLSDYICSIDYA--NDFLKMGGLPVLQPLLEG--- 152 (361)
Q Consensus 83 ~~L~eal~~~~-~~~~~~mk~~l~~L~----~~~~~~~~~~~Al~~L~~lve~idna--~~~~~~Gg~~~Lv~LL~s--- 152 (361)
+-+++.|-.+. ....+.++..+..|. +.+.+=..++.++..+..+.+.++.. +.+.. ..++.|+.++.+
T Consensus 431 ~~~Rd~L~~l~~l~~~~~~~~~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~-~vi~~Ll~l~~~~~~ 509 (1023)
T 4hat_C 431 KSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVV-TVIKDLLDLCVKKRG 509 (1023)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSSCHHHHHHHHH-HHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHcCCCchhHHHHHH-HHHHHHHHhhhcccc
Confidence 33456555544 232344444444442 22344578888888888888776532 33332 357888888864
Q ss_pred --CCHHHHHHHHHHHHHHhh---cCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH------
Q psy14164 153 --SDPELRWRAAETVADIVQ---NNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE------ 221 (361)
Q Consensus 153 --~~~~vr~~Aa~~Lg~iaq---nn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~------ 221 (361)
+...||..++|+||..+. .+|.. + ..++..|+.-+. ++.+.++..|++|+.++|..+......
T Consensus 510 ~d~k~~v~~t~~~~lGry~~wl~~~~~~----L-~~vl~~L~~~l~-~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~ 583 (1023)
T 4hat_C 510 KDNKAVVASDIMYVVGQYPRFLKAHWNF----L-RTVILKLFEFMH-ETHEGVQDMACDTFIKIVQKCKYHFVIQQPRES 583 (1023)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHCHHH----H-HHHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCS
T ss_pred CcchHHHHHHHHHHHHHHHHHHhccHHH----H-HHHHHHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence 345577788999998654 23321 1 123444555454 345789999999999999854432210
Q ss_pred --HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCc
Q psy14164 222 --FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 222 --f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
|+ ...+..+..++..-+.+-+..+.-+++.++...+
T Consensus 584 ~p~~-~~il~~l~~~~~~l~~~~~~~lyeai~~vi~~~~ 621 (1023)
T 4hat_C 584 EPFI-QTIIRDIQKTTADLQPQQVHTFYKACGIIISEER 621 (1023)
T ss_dssp SCHH-HHHHHTHHHHHTTSCHHHHHHHHHHHHHHHTTCC
T ss_pred chhH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 21 1223334444444577888888999999998744
No 109
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=94.99 E-value=0.97 Score=48.51 Aligned_cols=191 Identities=12% Similarity=0.159 Sum_probs=117.1
Q ss_pred HHHHHhcCC-CCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcC-------HH
Q psy14164 103 IIKTLKENQ-DQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNN-------PF 174 (361)
Q Consensus 103 ~l~~L~~~~-~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn-------~~ 174 (361)
.+..|.++. ...-.|..|++.|..+.+.+. ...+.. .++.++..|.+++..||..|+++|.+++... +.
T Consensus 460 v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~~-~~~l~~--~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~ 536 (960)
T 1wa5_C 460 IAPDLTSNNIPHIILRVDAIKYIYTFRNQLT-KAQLIE--LMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFI 536 (960)
T ss_dssp THHHHHCSSCSCHHHHHHHHHHHHHTGGGSC-HHHHHH--HHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBS
T ss_pred hHHHhcCCCCCCceehHHHHHHHHHHHhhCC-HHHHHH--HHHHHHHHhCCCChhHHHHHHHHHHHHHhccccccccccc
Confidence 444555532 145678899999999988663 333333 4788888888889999999999999998741 11
Q ss_pred -HHHHHHh--cChHHHHHHhhccCC--CHH--HHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhh----cc-CCHHH
Q psy14164 175 -SQNFIIQ--TDFLNLLLTSIEHDS--NTT--VQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCI----QS-KKEKL 242 (361)
Q Consensus 175 -~q~~v~~--~g~l~~Ll~LL~~~~--~~~--v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL----~s-~~~~v 242 (361)
.+..+.. ...++.|+.++.... ... ....++.||+.++.........++. ..++.|+..+ ++ .+..+
T Consensus 537 ~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~-~l~~~L~~~l~~~~~~~~~~~~ 615 (960)
T 1wa5_C 537 FHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFP-QLLAQFIEIVTIMAKNPSNPRF 615 (960)
T ss_dssp SCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHH-HHHHHHHHHHHHHTTSCCCHHH
T ss_pred ccHHHhhhhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHhCCCCcHH
Confidence 1222211 235666777777531 011 2345667776665432222222221 1234444433 23 36677
Q ss_pred HHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 243 VIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 243 ~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..++-+|+.++.. +++....+ ...+++.+...|... ..++.+.++..+..++..
T Consensus 616 ~~~~~e~l~~l~~~~~~~~~~~~-~~~~~p~~~~iL~~~---~~~~~~~~~~i~~~l~~~ 671 (960)
T 1wa5_C 616 THYTFESIGAILNYTQRQNLPLL-VDSMMPTFLTVFSED---IQEFIPYVFQIIAFVVEQ 671 (960)
T ss_dssp HHHHHHHHHHHHHTSCGGGHHHH-HHHHHHHHHHHHHTT---CTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHH-HHHHHHHHHHHHHhh---hHhhHHHHHHHHHHHHHh
Confidence 77888899988876 44443333 345678888888876 667888888888777754
No 110
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=94.94 E-value=1.4 Score=40.24 Aligned_cols=130 Identities=10% Similarity=0.086 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhh
Q psy14164 113 QKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSI 192 (361)
Q Consensus 113 ~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL 192 (361)
++++|+..|....+++-+.|.. -+-+ -++.++.+-..++.+||...+..|+.++...++.. ..+++.|..|+
T Consensus 28 ~~~~kl~~L~qa~el~~~~dp~-ll~~--~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~-----~~~l~~L~~Ll 99 (257)
T 3gs3_A 28 SPSTKCELLAKVQETVLGSCAE-LAEE--FLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELL-----PHVINVVSMLL 99 (257)
T ss_dssp CHHHHHHHHHHHHHHHTTTTGG-GHHH--HHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHccCHh-HHHH--HHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 4479999999999977654432 2222 36777787777899999999999999997665433 34678888899
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCc--------H-------HHHHHhhccCCHHHHHHHHHHHHHHh
Q psy14164 193 EHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDG--------F-------SVLLRCIQSKKEKLVIKSCFLIACLC 254 (361)
Q Consensus 193 ~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~gg--------i-------~~Lv~lL~s~~~~v~~kA~~ll~~L~ 254 (361)
.. .++.|.++++-+.+++- +..++.+...++ | ..++..+.+.+..+|..+.-++..++
T Consensus 100 ~d-~d~~V~K~~I~~~~~iY---~~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 100 RD-NSAQVIKRVIQACGSIY---KNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVV 172 (257)
T ss_dssp TC-SCHHHHHHHHHHHHHHH---HHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHH
T ss_pred cC-CCHHHHHHHHHHHHHHH---HHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 84 68899999999999983 445555554433 1 24556677788999999887777655
No 111
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=94.86 E-value=0.93 Score=49.15 Aligned_cols=110 Identities=12% Similarity=0.090 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCC---CHHHHHHHHHHHHHHhhcC
Q psy14164 96 VGAELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGS---DPELRWRAAETVADIVQNN 172 (361)
Q Consensus 96 ~~~~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~---~~~vr~~Aa~~Lg~iaqnn 172 (361)
+++.+.+++....++..+.+.|..|.+-|..+=++. ++|.....+|.++ +..+|..|+.+|-+..+.-
T Consensus 4 ~~~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~sp---------~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~~l 74 (980)
T 3ibv_A 4 SAQDVENAVEAALDPSVGPIIKQQATDFIGSLRSSS---------TGWKICHEIFSEKTKYKPSTRLICLQTLSEKVREW 74 (980)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHST---------THHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCh---------hHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 466778899877787777888999988888776543 3788888988664 7899999999999988743
Q ss_pred HHH----HHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcC
Q psy14164 173 PFS----QNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRE 214 (361)
Q Consensus 173 ~~~----q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~ 214 (361)
|.. +...++.-++..+.+.-....+..+|.|.+.+|+.++..
T Consensus 75 ~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~ 120 (980)
T 3ibv_A 75 NNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQ 120 (980)
T ss_dssp CTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHH
T ss_pred ChhhhHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHH
Confidence 444 555556666666665211123468999999999999864
No 112
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=94.37 E-value=1.8 Score=40.35 Aligned_cols=160 Identities=14% Similarity=0.156 Sum_probs=101.8
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcCh----HHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhh
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDF----LNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEEC 218 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~----l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~ 218 (361)
+..+.+++ +=..+.+-+++.++.-++- +|.+...+.+.+. +..++..+.....+..+--++..++|+..+ +..
T Consensus 105 l~~l~kil-~WP~~~~fPvLDLlRl~~l-~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~-~~g 181 (304)
T 3ebb_A 105 LQILWKAI-NCPEDIVFPALDILRLSIK-HPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVG-QAG 181 (304)
T ss_dssp HHHHHHHH-TSCTTTCHHHHHHHHHHTT-SHHHHHHHHSTTTHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGS-HHH
T ss_pred HHHHHHHH-cCCHHhHHHHHHHHHHHHc-CccHHHHhhccccchHHHHHHHHhcCCCCChHHHHHHHHHHHHccCC-chh
Confidence 45666665 4445677788888877765 5666655544322 333445555444567789999999999885 445
Q ss_pred HHHHHhh--CcHHHHHHhhccCCHHHHHHHHHHHHHHhcCC---chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHH
Q psy14164 219 LKEFIKR--DGFSVLLRCIQSKKEKLVIKSCFLIACLCTDN---NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLS 293 (361)
Q Consensus 219 ~~~f~~~--ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~---~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~ 293 (361)
.+.+... -.++.+..++.+.+..+|.-++.++.|++... ... +.. ..++..+..++... .|.+..-.++-
T Consensus 182 ~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~-~~~--~~ll~~l~~il~~~--~d~EalyR~Lv 256 (304)
T 3ebb_A 182 QKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNI-EGK--AQCLSLISTILEVV--QDLEATFRLLV 256 (304)
T ss_dssp HHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCH-HHH--HHHHHHHHHHHTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCc-hHH--HHHHHHHHHHHhcc--CCHHHHHHHHH
Confidence 4444432 24455566666678999999999999998631 111 111 11444555555532 37888888999
Q ss_pred HHHHHHhcChHHHHhhc
Q psy14164 294 ALASLIKDSPEAQSLCR 310 (361)
Q Consensus 294 aL~~L~~~~~~~~~~~~ 310 (361)
||.+++...++..+.|+
T Consensus 257 ALGtL~~~~~~~~~lak 273 (304)
T 3ebb_A 257 ALGTLISDDSNAVQLAK 273 (304)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCChhHHHHHH
Confidence 99999987766555553
No 113
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=94.27 E-value=0.17 Score=43.46 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=59.2
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHHHHHhhcc-----CCCHHHHHHHHHHHHHHhc
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNLLLTSIEH-----DSNTTVQVKSLYAVSCLVR 213 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~Ll~LL~~-----~~~~~v~~~Al~ALS~l~r 213 (361)
+..|.+-|+|.++.++..|+.+|-.+++|. +.++..|.+...+..|++++.. ..+..|+.+++..|-.-..
T Consensus 52 ~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 128 (171)
T 1juq_A 52 VRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTM 128 (171)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 566777889999999999999999999995 6678888888999999999963 2457899999888876544
No 114
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=94.24 E-value=0.27 Score=41.74 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=58.3
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHh
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~ 212 (361)
+..|.+-|.+.++.++..|+.+|-.+++| .+..+..|.....+..|++++....++.|+.+++..|-.-.
T Consensus 54 ~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~ 124 (163)
T 1x5b_A 54 LKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWS 124 (163)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 55666778899999999999999999999 57788888888899999999985567789999888776543
No 115
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=93.70 E-value=0.52 Score=39.34 Aligned_cols=72 Identities=10% Similarity=0.032 Sum_probs=60.0
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHhcChHHHHHHhhcc-----CCCHHHHHHHHHHHHHHhc
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQNFIIQTDFLNLLLTSIEH-----DSNTTVQVKSLYAVSCLVR 213 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~~~g~l~~Ll~LL~~-----~~~~~v~~~Al~ALS~l~r 213 (361)
++..|.+-|+|.++.++..|+.+|-.+++| .+.++..|.+...+..|++++.. ..+..|+.+++..|-.-..
T Consensus 39 a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 116 (148)
T 1mhq_A 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV 116 (148)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 356677778899999999999999999999 57788888889999999999974 2467999998877776543
No 116
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=93.61 E-value=2.3 Score=38.23 Aligned_cols=146 Identities=8% Similarity=0.004 Sum_probs=93.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hhcCCCHHHHHHHHHHHHHHhh-cCHHHH
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LLEGSDPELRWRAAETVADIVQ-NNPFSQ 176 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL~s~~~~vr~~Aa~~Lg~iaq-nn~~~q 176 (361)
.+......|.+ ++..+.+.-|...|..+ . .... .++.+.. +-..++=.||..++.+++.++. .+|.
T Consensus 71 ~~~~la~~L~~-~~~deVR~~Av~lLg~~-~--~~~~------~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe-- 138 (240)
T 3l9t_A 71 YIKKLAFLAYQ-SDVYQVRMYAVFLFGYL-S--KDKE------ILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK-- 138 (240)
T ss_dssp HHHHHHHHHHT-CSSHHHHHHHHHHHHHT-T--TSHH------HHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHh-CcchHHHHHHHHHHHhc-c--CcHH------HHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH--
Confidence 33444444444 24457888888766665 2 1111 2555555 4456778999999999999885 4443
Q ss_pred HHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC
Q psy14164 177 NFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD 256 (361)
Q Consensus 177 ~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~ 256 (361)
..++.+.....+ .+..||+.|+-.+---+.. + ..+. .-.-.++.|..+..+++.-||+-.+|.|..+...
T Consensus 139 ------~~l~~~~~W~~d-~n~~VRR~Ase~~rpW~~~-~-~~k~-dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~ 208 (240)
T 3l9t_A 139 ------KALPIIDEWLKS-SNLHTRRAATEGLRIWTNR-P-YFKE-NPNEAIRRIADLKEDVSEYVRKSVGNALRDISKK 208 (240)
T ss_dssp ------TTHHHHHHHHHC-SSHHHHHHHHHHTCSGGGS-T-TTTT-CHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHHhcC-CCHHHHHHHHHhhHHHhcc-c-hhhc-CHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhh
Confidence 156777777775 6789998887665321211 1 0000 0011456666677778999999999999999999
Q ss_pred CchHHHHHHh
Q psy14164 257 NNQVKQVLLS 266 (361)
Q Consensus 257 ~~~~~~~l~~ 266 (361)
+|+....+++
T Consensus 209 ~Pd~V~~~~~ 218 (240)
T 3l9t_A 209 FPDLVKIELK 218 (240)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9987666654
No 117
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=93.55 E-value=0.83 Score=41.18 Aligned_cols=141 Identities=11% Similarity=0.053 Sum_probs=95.5
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhc-CChhhHHHH
Q psy14164 144 PVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVR-ENEECLKEF 222 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r-~~~~~~~~f 222 (361)
+....|.+++..++|..|+.+||.. ... ...++.+...+..+..=.||.-++.+++.++. -.+..
T Consensus 74 ~la~~L~~~~~deVR~~Av~lLg~~-~~~---------~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe~---- 139 (240)
T 3l9t_A 74 KLAFLAYQSDVYQVRMYAVFLFGYL-SKD---------KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKK---- 139 (240)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHT-TTS---------HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTTT----
T ss_pred HHHHHHHhCcchHHHHHHHHHHHhc-cCc---------HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHH----
Confidence 3444577889999999999999977 211 22567777756666677899999999998884 23321
Q ss_pred HhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 223 IKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 223 ~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
.++.+...+.+++.-||+-|.-.+.--+.. +..+... .-+++.|-.+...+ +--+|..+.++|.-+++.+
T Consensus 140 ----~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~-~~~k~dp--~~ll~iL~~L~~D~---s~yVrKSVan~LrD~SK~~ 209 (240)
T 3l9t_A 140 ----ALPIIDEWLKSSNLHTRRAATEGLRIWTNR-PYFKENP--NEAIRRIADLKEDV---SEYVRKSVGNALRDISKKF 209 (240)
T ss_dssp ----THHHHHHHHHCSSHHHHHHHHHHTCSGGGS-TTTTTCH--HHHHHHHHTTTTCS---CHHHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHhcCCCHHHHHHHHHhhHHHhcc-chhhcCH--HHHHHHHHHhcCCh---HHHHHHHHHHHHHHHhhhC
Confidence 456678888999999999888765432221 1111000 01244444444444 6788999999999999999
Q ss_pred hHHHHh
Q psy14164 303 PEAQSL 308 (361)
Q Consensus 303 ~~~~~~ 308 (361)
|+.+..
T Consensus 210 Pd~V~~ 215 (240)
T 3l9t_A 210 PDLVKI 215 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 118
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=93.48 E-value=0.62 Score=50.60 Aligned_cols=170 Identities=11% Similarity=0.004 Sum_probs=91.4
Q ss_pred HHHHHHHHHhhc-CCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHhhcCcccH--HHHHHCCCHHHHHHhhcC--
Q psy14164 82 RGFLLDALNSMM-VNVGAELEKIIKTLK----ENQDQKDICIGALDNLSDYICSIDYA--NDFLKMGGLPVLQPLLEG-- 152 (361)
Q Consensus 82 ~~~L~eal~~~~-~~~~~~mk~~l~~L~----~~~~~~~~~~~Al~~L~~lve~idna--~~~~~~Gg~~~Lv~LL~s-- 152 (361)
|+-.++.|..+. ....+.+.-.+..+. +...+-..+..|+-.+..+.+..... +.+. -..++.|+.+...
T Consensus 430 ~~~~~~~L~~l~~~~~~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l-~~v~~~l~~l~~~~~ 508 (1049)
T 3m1i_C 430 YKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFV-VTVIKDLLDLTVKKR 508 (1049)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHH-HHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcccCchhhHHHH-HHHHHHHHHHHhhhc
Confidence 444556665554 222223333333332 22234467888888888776654322 2211 1124444443332
Q ss_pred ---CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHH--------H
Q psy14164 153 ---SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLK--------E 221 (361)
Q Consensus 153 ---~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~--------~ 221 (361)
+.+-++..++|++|..+.--....+. + ..+++.|+..+.+ +++.|+..|++|+.+++..+..... .
T Consensus 509 ~~~~~~~v~~~~~~~lgry~~~~~~~~~~-l-~~vl~~ll~~l~~-~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p 585 (1049)
T 3m1i_C 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNF-L-RTVILKLFEFMHE-THEGVQDMACDTFIKIVQKCKYHFVIQQPRESEP 585 (1049)
T ss_dssp SHHHHHHHHHHHHHHHHHCHHHHHHCHHH-H-HHHHHHHHHHTTS-SCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhHHHH-H-HHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc
Confidence 34566667999999765321111122 2 2367778887775 5789999999999999986443221 1
Q ss_pred HHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC
Q psy14164 222 FIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD 256 (361)
Q Consensus 222 f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~ 256 (361)
++ ...+..+..++..-+.+-.....-++..++..
T Consensus 586 ~~-~~il~~l~~~~~~~~~~~~~~~~eai~~ii~~ 619 (1049)
T 3m1i_C 586 FI-QTIIRDIQKTTADLQPQQVHTFYKACGIIISE 619 (1049)
T ss_dssp HH-HHHHHTHHHHHTTSCHHHHHHHHHHHHHHHHT
T ss_pred HH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHc
Confidence 11 12233334445544555555666666666654
No 119
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=93.40 E-value=0.49 Score=42.32 Aligned_cols=71 Identities=14% Similarity=0.261 Sum_probs=59.2
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhc-CHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHh
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQN-NPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn-n~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~ 212 (361)
++..|.+-|.+.++.++..|+.+|..+++| .+..+..|.....+..|.+++....+..|+.+++..|-.-.
T Consensus 46 a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 117 (226)
T 3zyq_A 46 AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWA 117 (226)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 356677778899999999999999999998 44477778888888889999877677899999988887654
No 120
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=93.35 E-value=0.42 Score=43.94 Aligned_cols=107 Identities=9% Similarity=0.098 Sum_probs=82.4
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
+|.|+.=|.++...||..+-.++..+..--|. ..+++.++.-+.+ .+.-+|..++..|++++..+...
T Consensus 134 lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~-------~~v~~~l~~g~ks-KN~R~R~e~l~~l~~li~~~G~~---- 201 (266)
T 2of3_A 134 VPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGP-------LKMTPMLLDALKS-KNARQRSECLLVIEYYITNAGIS---- 201 (266)
T ss_dssp HHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH-------HHHHHHHHHGGGC-SCHHHHHHHHHHHHHHHHHHCSG----
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHhcCCC----
Confidence 68888888889999999999999887643221 2367778887776 67899999999999998644332
Q ss_pred HhhCcH---HHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHH
Q psy14164 223 IKRDGF---SVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQ 262 (361)
Q Consensus 223 ~~~ggi---~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~ 262 (361)
...++ +.+..++.+.|..||..|..++..+... ++.+..
T Consensus 202 -~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v~k 244 (266)
T 2of3_A 202 -PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMWK 244 (266)
T ss_dssp -GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred -ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 24578 9999999999999999999998876654 444443
No 121
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=93.11 E-value=0.56 Score=41.62 Aligned_cols=70 Identities=13% Similarity=0.184 Sum_probs=58.0
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHh
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~ 212 (361)
+..|.+-|.+.++.++..|+.+|..++.|. +..+..|.+...+..|++++.+..+..|+.+++..|-.-.
T Consensus 44 ~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 44 FAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 556667788999999999999999999996 5577788888899999999886667889988887666544
No 122
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=92.83 E-value=7.2 Score=37.59 Aligned_cols=178 Identities=15% Similarity=0.150 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH 194 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~ 194 (361)
++|+..|..+.+++-+.|. .-+ -.-++.++.+-..++.+||...+..|+.++....+.. ..+++.|..||..
T Consensus 40 ~~Kl~~L~q~~EL~l~~dp-sLl--~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~-----~~~l~~L~~LL~d 111 (386)
T 3o2t_A 40 DSKITVLKQVQELIINKDP-TLL--DNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELL-----LKLIANLNMLLRD 111 (386)
T ss_dssp THHHHHHHHHHHHHHTTCG-GGG--GGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhccCH-HHH--HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHcC
Confidence 5788888888887544332 111 2358889998888999999999999999987554432 2367788888874
Q ss_pred CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCc--------H-------HHHHHhhccCCHHHHHHHHHHHHHHhc--C-
Q psy14164 195 DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDG--------F-------SVLLRCIQSKKEKLVIKSCFLIACLCT--D- 256 (361)
Q Consensus 195 ~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~gg--------i-------~~Lv~lL~s~~~~v~~kA~~ll~~L~~--~- 256 (361)
.++.|.++++.+.+++ ++.+++.++..++ | ..++..+.+.+.-+|..+.-++-.++. .
T Consensus 112 -~d~~V~K~~I~~~tsl---Ypl~f~~i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~aiKFle~VIl~qS~ 187 (386)
T 3o2t_A 112 -ENVNVVKKAILTMTQL---YKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSP 187 (386)
T ss_dssp -SSHHHHHHHHHHHHHH---HHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHTSC
T ss_pred -CCHHHHHHHHHHHHHH---HHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhCC
Confidence 6889999999999998 3455555554433 2 245566778899999999987776651 1
Q ss_pred ---Cch---------------------HHHHHH--hCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHH
Q psy14164 257 ---NNQ---------------------VKQVLL--SMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEA 305 (361)
Q Consensus 257 ---~~~---------------------~~~~l~--~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~ 305 (361)
++. ....+. -.+.+..|+..|..+ ..+......++.+|..|+..-|..
T Consensus 188 ~~~d~~~p~~~~~d~SL~~VP~nHp~L~~~~Le~EA~~lLd~LL~~l~~~-~iss~~l~a~lnsLa~Iak~RP~~ 261 (386)
T 3o2t_A 188 RMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVHP-AISSINLTTALGSLANIARQRPMF 261 (386)
T ss_dssp CCTTCCCCGGGTTSCCGGGSCTTCSSSCHHHHHHHHHHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHHHSGGG
T ss_pred CCCCcccccccCCCCCHhhCCCCCCcCCHHHHHHHHHHHHHHHHHHHccc-ccccHHHHHHHHHHHHHHHhcHHH
Confidence 100 012222 235688888888864 113445566788888888877753
No 123
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=92.70 E-value=2.5 Score=41.23 Aligned_cols=148 Identities=10% Similarity=0.106 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc
Q psy14164 116 ICIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH 194 (361)
Q Consensus 116 ~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~ 194 (361)
.+..++|-|..++-....+.. +..++. .+.+..+..+..++++++|+-++...-++.+........++.++..
T Consensus 242 ~~FPaLDLLRl~v~~p~~~~~------l~~li~~~l~~~~~an~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~ 315 (425)
T 3pst_A 242 IKTPAYDIVRLIVKKLPYSSD------IKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDT 315 (425)
T ss_dssp CCHHHHHHHHHHGGGCSCGGG------GHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHHHHHHHSCC
T ss_pred cccHHHHHHHHHHcCCchHHH------HHHHHHHhcCCCChhHHHHHHHHHHHhcCCcchHHHHhhCchhHHHHHHHHHH
Confidence 367788888888876665433 222332 3446688999999999999998766455555443345666665532
Q ss_pred C-------CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc---------cCCHHHHHHHHHHHHHHhcCCc
Q psy14164 195 D-------SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ---------SKKEKLVIKSCFLIACLCTDNN 258 (361)
Q Consensus 195 ~-------~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~---------s~~~~v~~kA~~ll~~L~~~~~ 258 (361)
. .+..++..++..+=|++.-.... -.+......+.+++. ..+....-+++-++.+|+...+
T Consensus 316 ~l~~~~~~~nkNl~IA~ATLllNlAv~~~~~---~~~~el~~~l~e~l~~~~g~~E~~~~d~EA~yRlLVALGtLv~~~~ 392 (425)
T 3pst_A 316 EFSQASAKQSQNLAIAVSTLIFNYSALVTKG---NSDLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEP 392 (425)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHS---CSCTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCH
T ss_pred HhhhcccCCCchHHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCH
Confidence 1 12356665555555554311100 001223445666665 2477888889999999987666
Q ss_pred hHHHHHHhCCcHHH
Q psy14164 259 QVKQVLLSMGMVEQ 272 (361)
Q Consensus 259 ~~~~~l~~~g~i~~ 272 (361)
..++....-..+..
T Consensus 393 ~~~~~a~~~~~~~~ 406 (425)
T 3pst_A 393 TLRQFANSVTWLAN 406 (425)
T ss_dssp HHHHHHTTCHHHHH
T ss_pred HHHHHhcCHHHHHH
Confidence 55554443333333
No 124
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=92.68 E-value=1.7 Score=47.45 Aligned_cols=122 Identities=18% Similarity=0.279 Sum_probs=84.0
Q ss_pred hcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc------CCCHHHHHHHHHHHHHHhcCChhhHHHHH
Q psy14164 150 LEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH------DSNTTVQVKSLYAVSCLVRENEECLKEFI 223 (361)
Q Consensus 150 L~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~------~~~~~v~~~Al~ALS~l~r~~~~~~~~f~ 223 (361)
+...+.+-+..++++|||+-. | ..++.|.+++.. +....+|..|+|||..+....|.....+
T Consensus 449 ~~~~~~~~~~~~LkaLGN~g~--p---------~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~~p~~v~~i- 516 (1056)
T 1lsh_A 449 SDRAKEEEIVLALKALGNAGQ--P---------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQEI- 516 (1056)
T ss_dssp HHTTCHHHHHHHHHHHHHHTC--G---------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHHHHHH-
T ss_pred HhcCChHHHHHHHHHhhccCC--h---------hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhhchHHHHHH-
Confidence 345667777888888888853 3 367788888752 1245788999999999988766554444
Q ss_pred hhCcHHHHHHhhc--cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 224 KRDGFSVLLRCIQ--SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 224 ~~ggi~~Lv~lL~--s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..++. ..+..+|..|+.++- ...|. ...+..+...|..+ .+.++.--+...|.+++..
T Consensus 517 -------l~~i~~n~~e~~EvRiaA~~~Lm---~t~P~-------~~~l~~ia~~l~~E--~~~QV~sfv~S~l~sla~s 577 (1056)
T 1lsh_A 517 -------VLPIFLNVAIKSELRIRSCIVFF---ESKPS-------VALVSMVAVRLRRE--PNLQVASFVYSQMRSLSRS 577 (1056)
T ss_dssp -------HHHHHHCTTSCHHHHHHHHHHHH---HTCCC-------HHHHHHHHHHHTTC--SCHHHHHHHHHHHHHHTTC
T ss_pred -------HHHHhcCCCCChHHHHHHHHHHH---HHCcC-------HHHHHHHHHHHhhC--chHHHHHHHHHHHHHHHhc
Confidence 366663 348899988887764 22332 13466677777763 2778888888888888876
Q ss_pred C
Q psy14164 302 S 302 (361)
Q Consensus 302 ~ 302 (361)
.
T Consensus 578 ~ 578 (1056)
T 1lsh_A 578 S 578 (1056)
T ss_dssp C
T ss_pred C
Confidence 5
No 125
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=92.43 E-value=0.14 Score=51.89 Aligned_cols=159 Identities=11% Similarity=0.110 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH 194 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~ 194 (361)
..++.+.+.|.-+ -..+.. ...+..++..+..+.-++|..++-.|..+ .+...+ =.++++.++.-|..
T Consensus 243 PVRETaAQtLGaL-~hLp~e-----~~IL~qLV~~l~~~~WEVRHGGLLGLKYL---~DLL~~---Ld~Vv~aVL~GL~D 310 (800)
T 3oc3_A 243 PVRDAAAYLLSRI-YPLIGP-----NDIIEQLVGFLDSGDWQVQFSGLIALGYL---KEFVED---KDGLCRKLVSLLSS 310 (800)
T ss_dssp HHHHHHHHHHHHH-TTTSCS-----CCHHHHHTTGGGCSCHHHHHHHHHHHHHT---GGGCCC---HHHHHHHHHHHTTC
T ss_pred ehHHHHHHHHHHH-HhCChh-----HHHHHHHHhhcCCCCeeehhhhHHHHHHH---HHHHHH---HHHHHHHHHhhcCC
Confidence 7788888888777 454443 34566666666888999999999999887 121111 13567888888885
Q ss_pred CCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhcc--CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHH
Q psy14164 195 DSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS--KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQ 272 (361)
Q Consensus 195 ~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s--~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~ 272 (361)
.++.||.-|+.+|..++ .+.....++ ..+-.+|.. +-.........+++.|++..+.. -.....|+.
T Consensus 311 -~DDDVRAVAAetLiPIA--~p~~l~~LL-----~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~a---~~dp~LVPR 379 (800)
T 3oc3_A 311 -PDEDIKLLSAELLCHFP--ITDSLDLVL-----EKCWKNIESEELISVSKTSNLSLLTKIYRENPEL---SIPPERLKD 379 (800)
T ss_dssp -SSHHHHHHHHHHHTTSC--CSSTHHHHH-----HHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTTC---CCCSGGGGG
T ss_pred -cccHHHHHHHHHhhhhc--chhhHHHHH-----HHHHHHhhhhcccchhhHHHHHHHHHHHcCCccc---ccChHHHHH
Confidence 67899999999999998 333333332 333344332 21233344566777777644211 112378999
Q ss_pred HHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 273 MCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 273 Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
|-.+|+++ -+.+|..++.+|..++
T Consensus 380 L~PFLRHt---ITSVR~AVL~TL~tfL 403 (800)
T 3oc3_A 380 IFPCFTSP---VPEVRTSILNMVKNLS 403 (800)
T ss_dssp TGGGGTCS---SHHHHHHHHHHTTTCC
T ss_pred HHhhhcCC---cHHHHHHHHHHHHHHH
Confidence 99999999 9999999999998877
No 126
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=92.38 E-value=1.2 Score=37.10 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=58.1
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHHHHHhhcc-----CCCHHHHHHHHHHHHHHhc
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNLLLTSIEH-----DSNTTVQVKSLYAVSCLVR 213 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~Ll~LL~~-----~~~~~v~~~Al~ALS~l~r 213 (361)
+..|.+-|.|.++.++..|+.+|-.+++|. +.++..|.....+..|++++.. ..+..|+.+.+..|-.-..
T Consensus 50 ~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 50 TRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 556667788999999999999999999985 4567778888899999999963 2567899999888877654
No 127
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=92.19 E-value=0.76 Score=41.81 Aligned_cols=172 Identities=9% Similarity=0.071 Sum_probs=101.8
Q ss_pred CCCHHhHHHHHHHHHhhcCCHHHH-HHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hhcCC
Q psy14164 76 SMNEANRGFLLDALNSMMVNVGAE-LEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LLEGS 153 (361)
Q Consensus 76 ~~s~e~~~~L~eal~~~~~~~~~~-mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL~s~ 153 (361)
.+++|+..-+..++..+. +..+. ..-+++++.. .. .+..++|-+.-++-+...+..+. .++. .+.+.
T Consensus 34 ~ls~~el~~l~~~l~~l~-~~~~~~~~~~~ki~~~--WP--~~fP~lDllRl~~~~~~~~~~l~------~~l~~~~~~~ 102 (253)
T 3gae_A 34 TFDDEILAQIGGALHDID-ESWELLLSFANTIRSN--WE--IKTPAYDIVRLIVKKLPYSSDIK------DYIEEGLGNK 102 (253)
T ss_dssp CSCHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHHH--CS--CCHHHHHHHHHHGGGCSCGGGGH------HHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHh--CC--ccchHHHHHHHHHcCCchHHHHH------HHHHHhcCCC
Confidence 688998888887775443 11222 2223344433 22 57889999998887766554332 2332 34466
Q ss_pred CHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccC-------CCHHHHHHHHHHHHHHhcCChhhHHHHHhhC
Q psy14164 154 DPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHD-------SNTTVQVKSLYAVSCLVRENEECLKEFIKRD 226 (361)
Q Consensus 154 ~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~-------~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~g 226 (361)
++..+..++++++|+-.+....++.+........++..+... .+..+|..++..+-|++........ +..
T Consensus 103 ~~~~~ml~lR~l~NlF~~~~~g~~l~~~~~~~~~i~~~i~~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~---~~e 179 (253)
T 3gae_A 103 NITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---DLE 179 (253)
T ss_dssp SHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS---CTT
T ss_pred chhHHHHHHHHHHHcccCCchHHHHHhcchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc---hHH
Confidence 789999999999999987664566665543445555544221 2446777777666666542110000 122
Q ss_pred cHHHHHHhhcc---------CCHHHHHHHHHHHHHHhcCCchHH
Q psy14164 227 GFSVLLRCIQS---------KKEKLVIKSCFLIACLCTDNNQVK 261 (361)
Q Consensus 227 gi~~Lv~lL~s---------~~~~v~~kA~~ll~~L~~~~~~~~ 261 (361)
....+++++.. .+....-+++-++.+|+..++..+
T Consensus 180 ~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAlGtL~~~~~~~~ 223 (253)
T 3gae_A 180 LLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPTLR 223 (253)
T ss_dssp HHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCcHHHH
Confidence 34455555542 366777888888888886555444
No 128
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=92.00 E-value=1.1 Score=37.67 Aligned_cols=70 Identities=17% Similarity=0.155 Sum_probs=56.2
Q ss_pred HHHHHHhhc-CCCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHH-HHHhhcc--CCCHHHHHHHHHHHHHHh
Q psy14164 143 LPVLQPLLE-GSDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNL-LLTSIEH--DSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 143 ~~~Lv~LL~-s~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~-Ll~LL~~--~~~~~v~~~Al~ALS~l~ 212 (361)
+..|.+-|+ +.++.++..|+.+|-.+++|. +..+..+.+...+.. |++++.. .++..|+.+++..|-.-.
T Consensus 55 ~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W~ 129 (157)
T 1elk_A 55 LRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWA 129 (157)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Confidence 556667776 489999999999999999996 888888888889998 8898852 245689999887776643
No 129
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=91.98 E-value=2.4 Score=39.60 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHHhcCChhhHHHHHhhC--cHHH----HHHhhcc---CCHHHHHHHHHHHHHHhcCCchHHHHHHh
Q psy14164 196 SNTTVQVKSLYAVSCLVRENEECLKEFIKRD--GFSV----LLRCIQS---KKEKLVIKSCFLIACLCTDNNQVKQVLLS 266 (361)
Q Consensus 196 ~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~g--gi~~----Lv~lL~s---~~~~v~~kA~~ll~~L~~~~~~~~~~l~~ 266 (361)
.+..++..|...|++..|+||++...+...- -+.. |..++.. ....++++-+.+|..|+.....+. .
T Consensus 82 ~~~~~rE~aarII~ssLRNNP~Al~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~~~F~----~ 157 (315)
T 3qml_C 82 LPLTLRELSTRVITSCLRNNPPVVEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSEDLP----I 157 (315)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCSTTC------
T ss_pred CChhHHHHHHHHHHHHHccCHHHHHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhcChHhhh----h
Confidence 5678999999999999999999988776532 1222 2222222 345777777888888887643231 2
Q ss_pred CCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHh
Q psy14164 267 MGMVEQMCVLIDIEDALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 267 ~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~ 300 (361)
..+..|.+++... ..+.+++.+++..+..+..
T Consensus 158 -~~m~~L~~ly~~~-~~d~~~k~Kvl~li~d~f~ 189 (315)
T 3qml_C 158 -YSTVVLQNVYERN-NKDKQLQIKVLELISKILK 189 (315)
T ss_dssp -CCHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHccC-CCCHHHHHHHHHHHHHHcc
Confidence 3445566665533 2378999999998888774
No 130
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=91.88 E-value=0.92 Score=37.36 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=57.2
Q ss_pred CHHHHHHhhcCCCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHh
Q psy14164 142 GLPVLQPLLEGSDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLV 212 (361)
Q Consensus 142 g~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~ 212 (361)
++..|.+-|.+.++.++..|+.+|-.+++|. +..+..+.....+..|++++.. .++.|+.+.+..|-.-.
T Consensus 43 a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~-~~~~Vk~kil~li~~W~ 113 (140)
T 3ldz_A 43 CLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNK-GHPKVCEKLKALMVEWT 113 (140)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHH
Confidence 3566667788999999999999999999985 6677777777888888898875 57799999888777654
No 131
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=91.58 E-value=0.11 Score=47.28 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=14.7
Q ss_pred HHHHHhhcCCCHHHHHHHHHH
Q psy14164 144 PVLQPLLEGSDPELRWRAAET 164 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~ 164 (361)
+.|..+++.++..||..++.-
T Consensus 101 ~~L~~ll~D~d~~VR~~aA~~ 121 (244)
T 1lrv_A 101 EQLSALMFDEDREVRITVADR 121 (244)
T ss_dssp GGGGGTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHh
Confidence 456667777777777777763
No 132
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=91.20 E-value=2.9 Score=39.97 Aligned_cols=139 Identities=9% Similarity=0.097 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhhcCcccHHHHHHCCCHHHHHH-hhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhc--
Q psy14164 117 CIGALDNLSDYICSIDYANDFLKMGGLPVLQP-LLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIE-- 193 (361)
Q Consensus 117 ~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~-LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~-- 193 (361)
+..++|-|..++-....+.. +..++. .+.+..+..+..++++++|+-++...-++.+........+++.+.
T Consensus 180 ~FP~LDLLRl~v~~~~~~~~------l~~li~~~~~~~~~~n~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~~ 253 (362)
T 3l3f_X 180 KTPAYDIVRLIVKKLPYSSD------IKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDTE 253 (362)
T ss_dssp CHHHHHHHHHHGGGCSCGGG------GHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCSC
T ss_pred cchHHHHHHHHhcCCChHHH------HHHHHHHhcCCCChhHHHHHHHHHHHhccCcchHHHHHhcchhHHHHHHHHHHH
Confidence 67788888888876664432 222332 344667899999999999999876544554433222344455442
Q ss_pred --cC---CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc---------cCCHHHHHHHHHHHHHHhcCCch
Q psy14164 194 --HD---SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ---------SKKEKLVIKSCFLIACLCTDNNQ 259 (361)
Q Consensus 194 --~~---~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~---------s~~~~v~~kA~~ll~~L~~~~~~ 259 (361)
.. .+..++..++..+=|++...... -.+....+.+.+++. ..+....-+++-++.+|+..++.
T Consensus 254 ~~~~~~~~nkNl~IA~ATL~lNlAv~~~~~---~~~~el~~~l~~~l~~~~g~~E~~~~d~EA~yRlLVALGtL~~~~~~ 330 (362)
T 3l3f_X 254 FSQASAKQSQNLAIAVSTLIFNYSALVTKG---NSDLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEPT 330 (362)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHT---CSCTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCHH
T ss_pred hhhcccCCCchHHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCHH
Confidence 11 13456666665555554321100 001223445666665 24778888899999999875555
Q ss_pred HHHHH
Q psy14164 260 VKQVL 264 (361)
Q Consensus 260 ~~~~l 264 (361)
.++..
T Consensus 331 ~~~~a 335 (362)
T 3l3f_X 331 LRQFA 335 (362)
T ss_dssp HHHTG
T ss_pred HHHHh
Confidence 44433
No 133
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=91.15 E-value=1.3 Score=42.72 Aligned_cols=96 Identities=11% Similarity=0.098 Sum_probs=71.7
Q ss_pred HHHHHHHHHhcCCh-hhHHHHHhhCcHHHHHHhhcc-----------CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH
Q psy14164 203 KSLYAVSCLVRENE-ECLKEFIKRDGFSVLLRCIQS-----------KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV 270 (361)
Q Consensus 203 ~Al~ALS~l~r~~~-~~~~~f~~~ggi~~Lv~lL~s-----------~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i 270 (361)
+.+..|.--.|.++ ...+.|+ ++|+..|+.+|.. .+...+..+..++..|.....-....+-...+|
T Consensus 86 ~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i 164 (383)
T 3eg5_B 86 SCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGI 164 (383)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHH
T ss_pred HHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHH
Confidence 45666665556554 4568887 8999999999852 256888889999999987544344444456789
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
..|+..|.+. ...++..++..|..++...
T Consensus 165 ~~l~~~L~s~---~~~~~~~aleLL~~lc~~~ 193 (383)
T 3eg5_B 165 LLLVRAMDPA---VPNMMIDAAKLLSALCILP 193 (383)
T ss_dssp HHHHHTCCTT---SHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCC---chHHHHHHHHHHHHHHhCc
Confidence 9999999988 8999999999887777543
No 134
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=91.10 E-value=0.12 Score=46.99 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=17.3
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETV 165 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~L 165 (361)
...|..+++++++.||..|+..+
T Consensus 76 ~~~l~~L~~D~~~~VR~~aA~~L 98 (244)
T 1lrv_A 76 VEALTPLIRDSDEVVRRAVAYRL 98 (244)
T ss_dssp GGGGGGGTTCSSHHHHHHHHTTS
T ss_pred HHHHHHHccCcCHHHHHHHHHHC
Confidence 44566788888999998888653
No 135
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=90.40 E-value=1.3 Score=39.42 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=70.8
Q ss_pred HHHHHHHHHHhcCC-hhhHHHHHhhCcHHHHHHhhcc----C-------CHHHHHHHHHHHHHHhcCCchHHHHHHhCCc
Q psy14164 202 VKSLYAVSCLVREN-EECLKEFIKRDGFSVLLRCIQS----K-------KEKLVIKSCFLIACLCTDNNQVKQVLLSMGM 269 (361)
Q Consensus 202 ~~Al~ALS~l~r~~-~~~~~~f~~~ggi~~Lv~lL~s----~-------~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~ 269 (361)
.+.+..|.-..|.+ ....+.| ..+|+..|+..|.. + +...+..+..++..|.....-....+...++
T Consensus 19 ~~~L~~L~v~Lrt~~~~Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~ 97 (233)
T 2f31_A 19 LSCLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEG 97 (233)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSH
T ss_pred HHHHHHHhHhHhcCCcHHHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHH
Confidence 34556666555544 4567888 68999999888863 1 4677888999999998755444444555678
Q ss_pred HHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 270 VEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 270 i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..|+..|.++ +..++..++..|..++..
T Consensus 98 i~~l~~~L~s~---~~~~r~~~leLL~~lc~~ 126 (233)
T 2f31_A 98 ILLLVRAMDPA---VPNMMIDAAKLLSALCIL 126 (233)
T ss_dssp HHHHHTTCCTT---SHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCC---CchHHHHHHHHHHHHHhC
Confidence 99999999988 899999998888776653
No 136
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=87.65 E-value=2.1 Score=35.14 Aligned_cols=91 Identities=10% Similarity=0.168 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCC
Q psy14164 202 VKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIE 280 (361)
Q Consensus 202 ~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~ 280 (361)
...+--|+-+++..+.+.+ ..+..|..-|.+.++.++..|..++-.++.+ ++.+...+.+..++..|+.+++..
T Consensus 23 w~~ileicD~I~~~~~~~k-----~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~ 97 (140)
T 3ldz_A 23 WGLILDICDKVGQSRTGPK-----DCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKG 97 (140)
T ss_dssp HHHHHHHHHHHTTSTTHHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCcCHH-----HHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccC
Confidence 3456667777776654322 2355677778889999999999999888876 566777777788888899998777
Q ss_pred CCCChhHHHHHHHHHHHHHh
Q psy14164 281 DALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 281 ~~~d~~~~e~al~aL~~L~~ 300 (361)
+..++++++..+..-..
T Consensus 98 ---~~~Vk~kil~li~~W~~ 114 (140)
T 3ldz_A 98 ---HPKVCEKLKALMVEWTD 114 (140)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 89999999999877664
No 137
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=86.60 E-value=22 Score=33.57 Aligned_cols=174 Identities=13% Similarity=0.196 Sum_probs=118.0
Q ss_pred HHHhhcCcccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcC---hHHHHHHhhccCCCHHH
Q psy14164 124 LSDYICSIDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTD---FLNLLLTSIEHDSNTTV 200 (361)
Q Consensus 124 L~~lve~idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g---~l~~Ll~LL~~~~~~~v 200 (361)
|.+++..-..+.-+...+.+..+..+.+.++=+|-.-|...+-.+-+.+...-..++..+ .+...-+||.+ ++-.+
T Consensus 147 LRecir~e~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S-~NYVT 225 (341)
T 1upk_A 147 LRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHS-ENYVT 225 (341)
T ss_dssp HHHHHTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTC-SSHHH
T ss_pred HHHHHHhHHHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcC-Ccchh
Confidence 333333333344444555666777888889999999999999999988887766777654 56777788887 57899
Q ss_pred HHHHHHHHHHHhcC--ChhhHHHHHhh-CcHHHHHHhhccCCHHHHHHHHHHHHHHhcC---CchHHHHHHhC--CcHHH
Q psy14164 201 QVKSLYAVSCLVRE--NEECLKEFIKR-DGFSVLLRCIQSKKEKLVIKSCFLIACLCTD---NNQVKQVLLSM--GMVEQ 272 (361)
Q Consensus 201 ~~~Al~ALS~l~r~--~~~~~~~f~~~-ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~---~~~~~~~l~~~--g~i~~ 272 (361)
|+.++--|+-+.-+ |......++.. .-+..++.+|++.+..+|.+|-.++.-++.+ .+.....++.. .++..
T Consensus 226 kRQSlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl~f 305 (341)
T 1upk_A 226 KRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEF 305 (341)
T ss_dssp HHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999998864 66666666653 3688999999999999999999998887775 23455555543 23444
Q ss_pred HHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 273 MCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 273 Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
|-++.... ..|.++.+-=...+..|.
T Consensus 306 l~~f~~d~-~eDeqF~dEK~~lI~~I~ 331 (341)
T 1upk_A 306 LSKFQNDR-TEDEQFNDEKTYLVKQIR 331 (341)
T ss_dssp HHHTTTTC--CCSHHHHHHHHHHHHHH
T ss_pred HHhCCCCC-cchhhHHHHHHHHHHHHH
Confidence 44443321 124444443333344333
No 138
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=86.02 E-value=1.7 Score=47.56 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHHhhcCHH-HHHHHHhcChHHHHHHhhccCC----CHHHHHHHHHHHHHHhcCChhhHHHHHhhCc
Q psy14164 153 SDPELRWRAAETVADIVQNNPF-SQNFIIQTDFLNLLLTSIEHDS----NTTVQVKSLYAVSCLVRENEECLKEFIKRDG 227 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~-~q~~v~~~g~l~~Ll~LL~~~~----~~~v~~~Al~ALS~l~r~~~~~~~~f~~~gg 227 (361)
.+...+..++|++|.++..-.. .-+.++ -.+++.|+.|..+.. ...++...+|.+|...|=-. .-..|+ ...
T Consensus 491 ~sW~~lea~~~aigaIag~~~~~~E~~~L-p~vi~~Ll~L~e~~~~kd~k~~vas~i~~vlgrY~~wl~-~h~~~L-~~v 567 (1073)
T 3gjx_A 491 WSWKNLNTLCWAIGSISGAMHEEDEKRFL-VTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLR-AHWKFL-KTV 567 (1073)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCHHHHHHHH-HHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHCHHHHH-HCHHHH-HHH
T ss_pred CCHHHHhHHHHHHHHHHCcCCcccccchH-HHHHHHHhcccccccccchhHHHHHHHHHHHhhhHHHHH-hCHHHH-HHH
Confidence 4578899999999999864332 121222 136777777776532 12355556688887554211 112233 234
Q ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHhcCC
Q psy14164 228 FSVLLRCIQSKKEKLVIKSCFLIACLCTDN 257 (361)
Q Consensus 228 i~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~ 257 (361)
+..|++.+..++..|+..||.++..++...
T Consensus 568 l~~L~~~m~~~~~~vq~aA~~af~~i~~~C 597 (1073)
T 3gjx_A 568 VNKLFEFMHETHDGVQDMACDTFIKIAQKC 597 (1073)
T ss_dssp HHHHHHHTTCCSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 567778888889999999999999998753
No 139
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=85.59 E-value=21 Score=35.35 Aligned_cols=128 Identities=10% Similarity=0.097 Sum_probs=86.0
Q ss_pred HHhcCCCCHHHHHHHHHHHHHhhcC-cccHHHHHHCCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcCh
Q psy14164 106 TLKENQDQKDICIGALDNLSDYICS-IDYANDFLKMGGLPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDF 184 (361)
Q Consensus 106 ~L~~~~~~~~~~~~Al~~L~~lve~-idna~~~~~~Gg~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~ 184 (361)
+|.....+...|.-|.+-+..+... .+.++. ++..++.|...++..||..|.+-|..+|.+ .. + ..+
T Consensus 34 Il~~~kg~~k~K~LaaQ~I~kffk~FP~l~~~-----Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~----i--~ki 101 (507)
T 3u0r_A 34 ILDGVKGGTKEKRLAAQFIPKFFKHFPELADS-----AINAQLDLCEDEDVSIRRQAIKELPQFATG-EN----L--PRV 101 (507)
T ss_dssp HHHGGGSCHHHHHHHHHHHHHHGGGCGGGHHH-----HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TC----H--HHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhhChhhHHH-----HHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hh----h--hhH
Confidence 3444445677777777777776643 233333 578888999999999999999999999987 22 2 235
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHh
Q psy14164 185 LNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLC 254 (361)
Q Consensus 185 l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~ 254 (361)
.-.|++||..+ +.......-.+|-.+.+-++.+ -+..|...+.+++..+|.++.-+|+.=+
T Consensus 102 aDvL~QlLqtd-d~~E~~~V~~sL~sllk~Dpk~--------tl~~lf~~i~~~~e~~Rer~lkFi~~kl 162 (507)
T 3u0r_A 102 ADILTQLLQTD-DSAEFNLVNNALLSIFKMDAKG--------TLGGLFSQILQGEDIVRERAIKFLSTKL 162 (507)
T ss_dssp HHHHHHHTTCC-CHHHHHHHHHHHHHHHHHCHHH--------HHHHHHHHHHHSCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHhcc-chHHHHHHHHHHHHHHhcChHH--------HHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 66789999974 4455555666677776655543 2233333444457899999888886444
No 140
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=84.80 E-value=8 Score=42.30 Aligned_cols=113 Identities=9% Similarity=0.111 Sum_probs=73.6
Q ss_pred hHHHHHHhhcc-CCCHHHHHHHHHHHHHHhcCChh-hHHHHHhhCcHHHHHHhhccC---CHH--HHHHHHHHHHHHhc-
Q psy14164 184 FLNLLLTSIEH-DSNTTVQVKSLYAVSCLVRENEE-CLKEFIKRDGFSVLLRCIQSK---KEK--LVIKSCFLIACLCT- 255 (361)
Q Consensus 184 ~l~~Ll~LL~~-~~~~~v~~~Al~ALS~l~r~~~~-~~~~f~~~ggi~~Lv~lL~s~---~~~--v~~kA~~ll~~L~~- 255 (361)
.++.|-+.++. ..+-.....++||+++|+..-.+ ..+.|+ ...++.|+.+...+ +.+ ++...+|+++....
T Consensus 478 ~~~~l~~~~~~~~~sW~~lea~~~aigaIag~~~~~~E~~~L-p~vi~~Ll~L~e~~~~kd~k~~vas~i~~vlgrY~~w 556 (1073)
T 3gjx_A 478 MTKKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFL-VTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRF 556 (1073)
T ss_dssp HHHHHHHHHTSCCCCHHHHHHHHHHHHHTTTSSCHHHHHHHH-HHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhcCCCCCHHHHhHHHHHHHHHHCcCCcccccchH-HHHHHHHhcccccccccchhHHHHHHHHHHHhhhHHH
Confidence 44555555553 23467889999999999854332 233454 45677777776543 334 55555677765432
Q ss_pred --CCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHH
Q psy14164 256 --DNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEA 305 (361)
Q Consensus 256 --~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~ 305 (361)
.+++... -++..|++.+..+ +..+++.|..|+..+.+.|+..
T Consensus 557 l~~h~~~L~-----~vl~~L~~~m~~~---~~~vq~aA~~af~~i~~~C~~~ 600 (1073)
T 3gjx_A 557 LRAHWKFLK-----TVVNKLFEFMHET---HDGVQDMACDTFIKIAQKCRRH 600 (1073)
T ss_dssp HHHCHHHHH-----HHHHHHHHHTTCC---STTHHHHHHHHHHHHHHHTGGG
T ss_pred HHhCHHHHH-----HHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHH
Confidence 2333222 3466777777777 8999999999999999999754
No 141
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=84.06 E-value=4.1 Score=33.85 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=72.5
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCC
Q psy14164 202 VKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIE 280 (361)
Q Consensus 202 ~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~ 280 (361)
...+--|+-+++..+..-+ ..+..|..-|.+.++.++..|..++-.++.+ ++.+...+.+..++..|+.++...
T Consensus 29 w~~ileicD~I~~~~~~pk-----~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k 103 (149)
T 3g2s_A 29 WASINGFCEQLNEDFEGPP-----LATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPK 103 (149)
T ss_dssp HHHHHHHHHHGGGSSSHHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCCcHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHccc
Confidence 4466677777776553322 2455777778899999999999999988876 667788888889999999999631
Q ss_pred ---CCCChhHHHHHHHHHHHHHhcC
Q psy14164 281 ---DALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 281 ---~~~d~~~~e~al~aL~~L~~~~ 302 (361)
+..+..++++++..|..-...-
T Consensus 104 ~~~~~~~~~Vk~kil~li~~W~~~f 128 (149)
T 3g2s_A 104 YLGSRTSEKVKNKILELLYSWTVGL 128 (149)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0127899999999998877543
No 142
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=83.94 E-value=3 Score=35.46 Aligned_cols=94 Identities=10% Similarity=0.139 Sum_probs=70.9
Q ss_pred HHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCC-
Q psy14164 203 KSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIE- 280 (361)
Q Consensus 203 ~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~- 280 (361)
..+-.|+-+++..+...+ .++..|.+-|++.+..++..|+.++-.++.+ ++.+...+.+..++..|+.++...
T Consensus 32 ~~ileicD~I~~~~~~~k-----~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~ 106 (171)
T 1juq_A 32 EYIIGFCDQINKELEGPQ-----IAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKY 106 (171)
T ss_dssp HHHHHHHHHHHHSTTHHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHcCCccHH-----HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhcccc
Confidence 445567777765543322 2345778888899999999999999999887 567888888889999999998631
Q ss_pred --CCCChhHHHHHHHHHHHHHhc
Q psy14164 281 --DALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 281 --~~~d~~~~e~al~aL~~L~~~ 301 (361)
...+..++++++..|..-...
T Consensus 107 ~~~~~~~~Vk~kil~li~~W~~~ 129 (171)
T 1juq_A 107 LGDRVSEKVKTKVIELLYSWTMA 129 (171)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 123689999999998777654
No 143
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=83.35 E-value=6.5 Score=37.80 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=69.8
Q ss_pred HHHHHHHHHhcCC-hhhHHHHHhhCcHHHHHHhhcc-----------CCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcH
Q psy14164 203 KSLYAVSCLVREN-EECLKEFIKRDGFSVLLRCIQS-----------KKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMV 270 (361)
Q Consensus 203 ~Al~ALS~l~r~~-~~~~~~f~~~ggi~~Lv~lL~s-----------~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i 270 (361)
+.+..|.-..|.+ ....+.|. .+|+..|+..|.. .+...+..+..+|..|+....-....+...+++
T Consensus 24 ~~L~~L~v~Lrt~~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i 102 (386)
T 2bnx_A 24 SCLESLRVSLNNNPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGI 102 (386)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHH
T ss_pred HHHHHHhHHHhcCCcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHH
Confidence 3455555555544 45677885 7999999888752 156888899999999987655455555566789
Q ss_pred HHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 271 EQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 271 ~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
..|+..|.+. .+.++..++..|..++..
T Consensus 103 ~~l~~sL~s~---~~~~r~~vleLL~alc~~ 130 (386)
T 2bnx_A 103 LLLVRAMDPA---VPNMMIDAAKLLSALCIL 130 (386)
T ss_dssp HHHHHTCCTT---SHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCC---CchHHHHHHHHHHHHHcC
Confidence 9999999888 888888888877776653
No 144
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=83.26 E-value=2.5 Score=35.09 Aligned_cols=94 Identities=10% Similarity=0.074 Sum_probs=70.2
Q ss_pred HHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCC-
Q psy14164 203 KSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIE- 280 (361)
Q Consensus 203 ~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~- 280 (361)
...-.|+-+++..+..- ..++..|..=|++.++.++..|..++-.++.+ ++.+...+.+..++..|+.++...
T Consensus 20 ~~~leicD~I~~~~~~~-----k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~ 94 (148)
T 1mhq_A 20 SAIQNFCEQVNTDPNGP-----THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKY 94 (148)
T ss_dssp HHHHHHHHHHHHSSHHH-----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCST
T ss_pred HHHHHHHHHHHcCCccH-----HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHcccc
Confidence 34446666666544322 22356777778899999999999999999887 677888888899999999998741
Q ss_pred --CCCChhHHHHHHHHHHHHHhc
Q psy14164 281 --DALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 281 --~~~d~~~~e~al~aL~~L~~~ 301 (361)
...+..++++++..+..-...
T Consensus 95 ~~~~~~~~Vk~kil~li~~W~~~ 117 (148)
T 1mhq_A 95 LGSWATGKVKGRVIEILFSWTVW 117 (148)
T ss_dssp TSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 112789999999988776643
No 145
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=82.92 E-value=8.7 Score=41.52 Aligned_cols=144 Identities=11% Similarity=0.092 Sum_probs=88.3
Q ss_pred HhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCh--hhHHHHHhh
Q psy14164 148 PLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENE--ECLKEFIKR 225 (361)
Q Consensus 148 ~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~--~~~~~f~~~ 225 (361)
.++.+.++.++..++.+|+....--| ...+++.+.++.+.++|.. +.++..|+-+|..++.... .....++..
T Consensus 200 ~~~~~~~~~l~~~~L~~l~s~i~wi~--~~~i~~~~ll~~l~~~L~~---~~~r~~A~ecL~ei~~k~~~~~~k~~li~~ 274 (980)
T 3ibv_A 200 AYSNAKNYGTVGLCLQVYAQWVSWIN--INLIVNEPCMNLLYSFLQI---EELRCAACETMTEIVNKKMKPLEKLNLLNI 274 (980)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTTTSC--HHHHHCHHHHHHHHHHTTS---HHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHHHhhcC--HHhhhcchHHHHHHHHcCC---hHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Confidence 34445788999999999999987544 3456777899999999974 5899999999999887643 222233332
Q ss_pred CcHHHHHHhhc--cCCHHHHHHHHHHHHHHhcC------Cc-----hHHHHH--HhCCcHHHHHHhccCCCCCChhHHHH
Q psy14164 226 DGFSVLLRCIQ--SKKEKLVIKSCFLIACLCTD------NN-----QVKQVL--LSMGMVEQMCVLIDIEDALDTEMNEH 290 (361)
Q Consensus 226 ggi~~Lv~lL~--s~~~~v~~kA~~ll~~L~~~------~~-----~~~~~l--~~~g~i~~Lv~lL~~~~~~d~~~~e~ 290 (361)
=.+..++..+. ..|..+.++.+.++..+... .+ +.+... .=.++++.++.++..+ +.++-..
T Consensus 275 l~L~~~~~~l~~~~~D~d~~~~la~L~~~~ge~l~~~~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~---~deVs~~ 351 (980)
T 3ibv_A 275 LNLNLFFSKSQEQSTDPNFDEHVAKLINAQGVELVAIKSDPSELSPELKENCSFQLYNLFPYLIRYLSDD---YDETSTA 351 (980)
T ss_dssp HHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHTHHHHHHHHTCS---SHHHHHT
T ss_pred HhHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHccCccccchhhhhhHHHHHHHHHHHHHHHhCCC---chhHHHH
Confidence 12222233333 45777777777776655321 11 111100 0125677777777766 6666666
Q ss_pred HHHHHHHHH
Q psy14164 291 LLSALASLI 299 (361)
Q Consensus 291 al~aL~~L~ 299 (361)
++..+..++
T Consensus 352 t~~Fw~~~l 360 (980)
T 3ibv_A 352 VFPFLSDLL 360 (980)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655554444
No 146
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=81.54 E-value=2.6 Score=35.54 Aligned_cols=90 Identities=11% Similarity=0.167 Sum_probs=67.2
Q ss_pred HHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCCCC
Q psy14164 204 SLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIEDA 282 (361)
Q Consensus 204 Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~~~ 282 (361)
..-.|+-+++..+...+ ..+..|..-|.+.++.++..|+.++-.++.+ ++.+...+.+..++..|+.++...
T Consensus 35 ~~leicD~I~~~~~~~k-----eA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~~-- 107 (163)
T 1x5b_A 35 LIMDICDKVGSTPNGAK-----DCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKNK-- 107 (163)
T ss_dssp HHHHHHHHHHHSSSHHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHhCCCccHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHccC--
Confidence 34456666665443322 2345677778889999999999999988887 677888888888999999988752
Q ss_pred CChhHHHHHHHHHHHHHh
Q psy14164 283 LDTEMNEHLLSALASLIK 300 (361)
Q Consensus 283 ~d~~~~e~al~aL~~L~~ 300 (361)
.+..++++++..|..-..
T Consensus 108 ~~~~Vk~kil~li~~W~~ 125 (163)
T 1x5b_A 108 AHPKVCEKLKSLMVEWSE 125 (163)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 278999999998876664
No 147
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=81.14 E-value=20 Score=39.51 Aligned_cols=107 Identities=8% Similarity=0.065 Sum_probs=71.7
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhh--cCCCHHHHHHHHHHHHHHhhcC----
Q psy14164 99 ELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLL--EGSDPELRWRAAETVADIVQNN---- 172 (361)
Q Consensus 99 ~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL--~s~~~~vr~~Aa~~Lg~iaqnn---- 172 (361)
.+.+++..+.++..+.+.+..|-+.|..+-.+. .+|..+...| .+.+..+|..|+.+|-+.++.+
T Consensus 12 ~l~~~l~~~~~p~~~~~~r~~Ae~~L~~~~~~p---------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l 82 (1204)
T 3a6p_A 12 QLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKC---------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGM 82 (1204)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHC---------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGS
T ss_pred HHHHHHHHHhCCCCChHHHHHHHHHHHHHHhCc---------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccC
Confidence 456777777676556667888877777764332 2566665544 4668899999999999988651
Q ss_pred HHHHHHHHhcChHHHHHHhhccC--CCHHHHHHHHHHHHHHhcC
Q psy14164 173 PFSQNFIIQTDFLNLLLTSIEHD--SNTTVQVKSLYAVSCLVRE 214 (361)
Q Consensus 173 ~~~q~~v~~~g~l~~Ll~LL~~~--~~~~v~~~Al~ALS~l~r~ 214 (361)
+..+...++..++..+.+..... .+..+|.+.+.+|+.|++.
T Consensus 83 ~~e~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~ 126 (1204)
T 3a6p_A 83 SRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKR 126 (1204)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHH
Confidence 33344445555666655542211 3578999999999998874
No 148
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=81.10 E-value=4.2 Score=36.13 Aligned_cols=112 Identities=10% Similarity=0.178 Sum_probs=77.2
Q ss_pred hHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHH
Q psy14164 184 FLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQ 262 (361)
Q Consensus 184 ~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~ 262 (361)
-+..+|.-..++...+.-...+--|+-+++..+..-+ .++..|..=|++.++.++..|+.++-.++.+ ++.+..
T Consensus 8 ~~~~~i~kAT~~~~~~~dw~~ileicD~I~~~~~~~k-----~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~ 82 (226)
T 3zyq_A 8 TFERLLDKATSQLLLETDWESILQICDLIRQGDTQAK-----YAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHD 82 (226)
T ss_dssp HHHHHHHHHTCTTCSSCCHHHHHHHHHHHHTTSSCHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred hHHHHHHHHcCCCCCCcCHHHHHHHHHHHhCCCccHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHH
Confidence 3444454444332111223455667777765443322 2355677778899999999999999999887 667788
Q ss_pred HHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcC
Q psy14164 263 VLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 263 ~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~ 302 (361)
.+.+..++..|+.++... .+..++++++..|......-
T Consensus 83 eias~~fl~~l~~l~~~~--~~~~Vk~kil~li~~W~~~f 120 (226)
T 3zyq_A 83 EVANKQTMEELKDLLKRQ--VEVNVRNKILYLIQAWAHAF 120 (226)
T ss_dssp HHSSHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHT
T ss_pred hhccHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHh
Confidence 888888888888888653 27899999999998777543
No 149
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=79.52 E-value=16 Score=34.40 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhcCChhhHHHH----------------HhhCcHHHHHHhhccCCHHHHHHHHH
Q psy14164 198 TTVQVKSLYAVSCLVRENEECLKEF----------------IKRDGFSVLLRCIQSKKEKLVIKSCF 248 (361)
Q Consensus 198 ~~v~~~Al~ALS~l~r~~~~~~~~f----------------~~~ggi~~Lv~lL~s~~~~v~~kA~~ 248 (361)
+..|...++.|+.+-.-+|.....+ -..||+..+..+|+.-+........-
T Consensus 154 ~~~r~ev~~Ria~l~~v~p~~l~~le~~L~~~l~~~~~~~~~~~gG~~~vA~ILN~~d~~~e~~il~ 220 (329)
T 3hjl_A 154 EELKKEVVKRIATLENVNVQYVKELAQILLEEISSLGAKEALKLEGTAVAAELLNTLDKETRELILQ 220 (329)
T ss_dssp HHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcccccccccccHHHHHHHHhcCChHHHHHHHH
Confidence 3566666666666655555443222 23689999999988766655554443
No 150
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=78.79 E-value=5.5 Score=40.64 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=94.6
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHH--HhcChHHHHHHhhccC---------CCHHHHHHHHHHHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFI--IQTDFLNLLLTSIEHD---------SNTTVQVKSLYAVSCL 211 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v--~~~g~l~~Ll~LL~~~---------~~~~v~~~Al~ALS~l 211 (361)
++.|+.-|-++.-++|.-|+-.|..+........... .+....-.|+-+|.-| .-.-||..|+.+|+.+
T Consensus 176 cE~L~~DLFdp~WEiRHGAALGLREILR~hG~GAGR~~~~N~DLAvRLLCVLALDRFGDYVSDqVVAPVRETaAQtLGaL 255 (800)
T 3oc3_A 176 FEQISDNLLSYEWYKRHGAFLAFAAMFSEIDNGGDIQIRVDSKLFSKIYEILVTDKFNDFVDDRTVAPVRDAAAYLLSRI 255 (800)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHHHCC----CCCCCCTTHHHHHHHHHHHBCCBBCSSSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcchhhhhHHHHHHHHHHHHhccCCceeccccHHHHHHHHHHHHhccccccccCeeeeehHHHHHHHHHHH
Confidence 4456666778999999999999999875433210000 1113444444444211 2247999999999999
Q ss_pred hcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHH
Q psy14164 212 VRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHL 291 (361)
Q Consensus 212 ~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~a 291 (361)
.+-++. ...+..|+..+..+.-.+|--+...|.++ . +....+ .++++.++..|... |.+++..|
T Consensus 256 -~hLp~e------~~IL~qLV~~l~~~~WEVRHGGLLGLKYL-~---DLL~~L--d~Vv~aVL~GL~D~---DDDVRAVA 319 (800)
T 3oc3_A 256 -YPLIGP------NDIIEQLVGFLDSGDWQVQFSGLIALGYL-K---EFVEDK--DGLCRKLVSLLSSP---DEDIKLLS 319 (800)
T ss_dssp -TTTSCS------CCHHHHHTTGGGCSCHHHHHHHHHHHHHT-G---GGCCCH--HHHHHHHHHHTTCS---SHHHHHHH
T ss_pred -HhCChh------HHHHHHHHhhcCCCCeeehhhhHHHHHHH-H---HHHHHH--HHHHHHHHhhcCCc---ccHHHHHH
Confidence 765554 34555566666777899999999899988 1 111111 36688888888888 89999999
Q ss_pred HHHHHHHH
Q psy14164 292 LSALASLI 299 (361)
Q Consensus 292 l~aL~~L~ 299 (361)
+.+|.-++
T Consensus 320 AetLiPIA 327 (800)
T 3oc3_A 320 AELLCHFP 327 (800)
T ss_dssp HHHHTTSC
T ss_pred HHHhhhhc
Confidence 99887777
No 151
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=75.29 E-value=17 Score=30.12 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=54.2
Q ss_pred HHHHHHhhcC-CCHHHHHHHHHHHHHHhhcC-HHHHHHHHhcChHHH-HHHhhccC--CCHHHHHHHHHHHHHHhcCC
Q psy14164 143 LPVLQPLLEG-SDPELRWRAAETVADIVQNN-PFSQNFIIQTDFLNL-LLTSIEHD--SNTTVQVKSLYAVSCLVREN 215 (361)
Q Consensus 143 ~~~Lv~LL~s-~~~~vr~~Aa~~Lg~iaqnn-~~~q~~v~~~g~l~~-Ll~LL~~~--~~~~v~~~Al~ALS~l~r~~ 215 (361)
+..|.+-|.+ .++.+...|+.+|..+++|. +.++..|.....+.- |++++... .+..|+.+++..|-.-...+
T Consensus 55 ~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eiask~Fl~e~L~kl~~~~~~~~~~Vk~kil~li~~Wa~~F 132 (152)
T 3rru_A 55 VKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGF 132 (152)
T ss_dssp HHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHTTTTGGGGSGGGCCCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHhhHhHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 5556666664 68888889999999999984 456777777777764 78888642 34579999999998877544
No 152
>3ut4_A CTHE_2751, putative uncharacterized protein; non PFAM singleton, helical fold, unknown function; 2.03A {Clostridium thermocellum} PDB: 3ut8_A 3ut7_A
Probab=74.03 E-value=20 Score=29.14 Aligned_cols=100 Identities=10% Similarity=0.001 Sum_probs=62.7
Q ss_pred cHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHH
Q psy14164 227 GFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQ 306 (361)
Q Consensus 227 gi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~ 306 (361)
-++-|+.-|++.+--+...++-.+... .. -+++.+.+.|++. |..=.- +.|..+...-+...
T Consensus 32 ~lp~LL~WLQD~NWPvA~~i~~~L~~~---~~---------~l~p~I~~vl~s~---D~~W~y---wil~~lv~~~~~~~ 93 (134)
T 3ut4_A 32 IIFDLLKWLQDYNWPIAKDILPVVVLH---QS---------IAMPHILTILQGN---DIMWKY---WVIKLMIPYLIYPN 93 (134)
T ss_dssp HHHHHHGGGSCTTSTTHHHHHHHHHHT---HH---------HHHHHHHHHHHSS---CHHHHH---HHHHHHGGGCCHHH
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHc---cH---------hhHHHHHHHHHcC---ChHHHH---HHHHHHHHcCCHHH
Confidence 356777778877766666555554432 11 2466677777765 554443 44555565554332
Q ss_pred HhhccCcchHHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcCC
Q psy14164 307 SLCRLEPLNLKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEE 350 (361)
Q Consensus 307 ~~~~~~~l~l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~~ 350 (361)
. ..++..|++...+-.+.+...+..+.|.+||++||.+
T Consensus 94 ~------~~l~~eL~rl~~~pt~~E~~eev~e~A~~iL~~~~~~ 131 (134)
T 3ut4_A 94 K------QLVKSELERLSSLEIINEDIREIVNLSKDYLHFYYPD 131 (134)
T ss_dssp H------HHHHHHHHHHHTCCCSSGGGHHHHHHHHHHHHHHC--
T ss_pred H------HHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHccc
Confidence 2 2456677777777776767777889999999999964
No 153
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=72.15 E-value=13 Score=30.81 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=65.4
Q ss_pred HHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc-cCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHH-HHHhccCC
Q psy14164 204 SLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ-SKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQ-MCVLIDIE 280 (361)
Q Consensus 204 Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~-s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~-Lv~lL~~~ 280 (361)
..-.|+-+++..+.+.+ .++..|..-|+ +++..++..|..++-.++.+ ++.+...+.+..++.. |+.++...
T Consensus 36 ~~leicD~I~~~~~~~k-----~a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~~fh~eva~~~fl~e~Lvk~~~~k 110 (157)
T 1elk_A 36 LNMEICDIINETEEGPK-----DALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPK 110 (157)
T ss_dssp HHHHHHHHHHHSSSHHH-----HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTT
T ss_pred HHHHHHHHHhCCCccHH-----HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCHHHHHHHhhHHHHHHHHHHHhccC
Confidence 34456666664433322 23456777776 47899999999999998887 5778888888889998 88888532
Q ss_pred CCCChhHHHHHHHHHHHHHh
Q psy14164 281 DALDTEMNEHLLSALASLIK 300 (361)
Q Consensus 281 ~~~d~~~~e~al~aL~~L~~ 300 (361)
...+..++++++..+..-..
T Consensus 111 ~~~~~~Vk~kil~li~~W~~ 130 (157)
T 1elk_A 111 NNPPTIVHDKVLNLIQSWAD 130 (157)
T ss_dssp TCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHH
Confidence 11146899999988877664
No 154
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=71.56 E-value=8.2 Score=33.92 Aligned_cols=91 Identities=9% Similarity=0.196 Sum_probs=67.8
Q ss_pred HHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHHHHHhccCCCC
Q psy14164 204 SLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQMCVLIDIEDA 282 (361)
Q Consensus 204 Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~Lv~lL~~~~~ 282 (361)
.+-.|+-+++..+...+ ..+..|..-|+++++.++..|+.++-.++.+ ++.+...+.+..++..|+.++...
T Consensus 25 ~~leicd~i~~~~~~~k-----~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~~-- 97 (220)
T 1dvp_A 25 SILLICDEINQKDVTPK-----NAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLEST-- 97 (220)
T ss_dssp HHHHHHHHHHTTSSCHH-----HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhhcCCCcCHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcCC--
Confidence 34556667665443322 2345667778889999999999999999987 566777888888899999888753
Q ss_pred CChhHHHHHHHHHHHHHhc
Q psy14164 283 LDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 283 ~d~~~~e~al~aL~~L~~~ 301 (361)
.+..++++++..+..-...
T Consensus 98 ~~~~Vk~kil~li~~W~~~ 116 (220)
T 1dvp_A 98 PHENVRQKMLELVQTWAYA 116 (220)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 2789999999988777653
No 155
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=61.91 E-value=9.5 Score=31.32 Aligned_cols=77 Identities=10% Similarity=0.145 Sum_probs=50.8
Q ss_pred cHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChH-HHHhhccCcchHHHHHHHHH------HhhcChhhhHHHHHHHH
Q psy14164 269 MVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPE-AQSLCRLEPLNLKFKLNFIK------EKHAGNEVYHKELEYVN 341 (361)
Q Consensus 269 ~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~-~~~~~~~~~l~l~~~Le~~~------~~l~~~~e~~~e~~~~~ 341 (361)
+.+.|.+-|... +..+.-+||..|..|+..... .+..++..- . .++... ..+.+.+.+..+++.|.
T Consensus 50 im~~L~kRL~~k---~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~-~---~Ik~l~~F~g~~dp~~G~d~g~~VR~~Ak 122 (140)
T 1vdy_A 50 FSEFILKRLDNK---SPIVKQKALRLIKYAVGKSGSEFRREMQRNS-V---AVRNLFHYKGHPDPLKGDALNKAVRETAH 122 (140)
T ss_dssp HHHHHHHHHTSS---SHHHHHHHHHHHHHHTTTSCHHHHHHHHHTT-H---HHHTTTTCCCCCCTTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCC---CcceeehHHHHHHHHHHhCCHHHHHHHHHhH-H---HHHHHHhcCCCCCcccccchhHHHHHHHH
Confidence 466677778777 788999999999999976543 333332221 1 111111 11233456788999999
Q ss_pred HHHHHhcCCCC
Q psy14164 342 SVLTEVFEEDS 352 (361)
Q Consensus 342 ~il~~~f~~~~ 352 (361)
.+++..|.++.
T Consensus 123 El~~ll~d~~~ 133 (140)
T 1vdy_A 123 ETISAIFSEEN 133 (140)
T ss_dssp HHHHHHTCCSS
T ss_pred HHHHHHhCcCC
Confidence 99999998765
No 156
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=61.51 E-value=35 Score=27.89 Aligned_cols=95 Identities=13% Similarity=0.181 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCc-HHHHHHhccCC
Q psy14164 203 KSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGM-VEQMCVLIDIE 280 (361)
Q Consensus 203 ~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~-i~~Lv~lL~~~ 280 (361)
..+--|+.++++++... | .-.+..|.+-|.+++..++-||+.+|-+|+.. .+.++..+.+.-. |..+.++=..+
T Consensus 30 ylm~EIA~~T~~s~~~~--~--~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~Ik~l~~F~g~~ 105 (140)
T 1vdy_A 30 YKLEEICDLLRSSHVSI--V--KEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHP 105 (140)
T ss_dssp HHHHHHHHHHHHSCHHH--H--HHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHHHTTTTCCCCC
T ss_pred HHHHHHHHHHHhcchhH--H--HHHHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHhcCCCC
Confidence 34556677776553221 1 12356788888888999999999999999976 5566777765543 33222221111
Q ss_pred C--CCC---hhHHHHHHHHHHHHHhc
Q psy14164 281 D--ALD---TEMNEHLLSALASLIKD 301 (361)
Q Consensus 281 ~--~~d---~~~~e~al~aL~~L~~~ 301 (361)
. .++ ..||+.|-.++..|-..
T Consensus 106 dp~~G~d~g~~VR~~AkEl~~ll~d~ 131 (140)
T 1vdy_A 106 DPLKGDALNKAVRETAHETISAIFSE 131 (140)
T ss_dssp CTTTSSCHHHHHHHHHHHHHHHHTCC
T ss_pred CcccccchhHHHHHHHHHHHHHHhCc
Confidence 1 111 46788887777666543
No 157
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*
Probab=60.91 E-value=75 Score=30.50 Aligned_cols=125 Identities=15% Similarity=0.255 Sum_probs=80.4
Q ss_pred HHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccCCCCCC
Q psy14164 205 LYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDIEDALD 284 (361)
Q Consensus 205 l~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~d 284 (361)
.+-|=++..|...++.-|+..+|+..+-...+.++..+.+..+-++-....... ... .-=.+.++.++..+... ++
T Consensus 263 ~FDLL~LLmHdSnAIDGFVk~DGv~~I~TvinYpN~~l~RaG~KLLLQVSDaks-L~~-t~L~e~LPFi~~~i~~h--~e 338 (619)
T 3c2g_A 263 TFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQYPNNDLIRAGCKLLLQVSDAKA-LAK-TPLENILPFLLRLIEIH--PD 338 (619)
T ss_dssp HHHHHHHHCCSHHHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCGG-GGT-SCCTTHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHhcccccccceeecccceeEEEEeecCCcHHHHhhhheeeeecchHH-Hhh-ccccccchHHHHHhccC--CC
Confidence 455667888889999999999999999999999999999888888776644321 110 00124566677766543 26
Q ss_pred hhHHHHHHHHHHHHHhcChHHHHhh-ccCcchHHHHHHHHHHhhcChhhhHHH
Q psy14164 285 TEMNEHLLSALASLIKDSPEAQSLC-RLEPLNLKFKLNFIKEKHAGNEVYHKE 336 (361)
Q Consensus 285 ~~~~e~al~aL~~L~~~~~~~~~~~-~~~~l~l~~~Le~~~~~l~~~~e~~~e 336 (361)
+++.-.--..|.+.+.+.....+.. +... .-+|-+.+-+-....++.|-
T Consensus 339 DdvvYSGTGFLSNVVAHKq~VKelAI~~nA---I~LLh~~I~ky~~Lsdf~ea 388 (619)
T 3c2g_A 339 DEVIYSGTGFLSNVVAHKQHVKDIAIRSNA---IFLLHTIISKYPRLDELTDA 388 (619)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHTTH---HHHHHHHHHTSCCGGGCCSH
T ss_pred cceEEecchHHHHHHhcccchHHHHhccCc---HHHHHHHHhhCCChhhhhhh
Confidence 6777777777888887665443332 2222 22444555444444455444
No 158
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=60.07 E-value=70 Score=26.20 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhc------CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHH
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLE------GSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLL 188 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~------s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~L 188 (361)
-.|+.-|..+...+...+....|...|.+..+-.-|. -|+..||...+.+|.++ |-.++.+.+.|....+
T Consensus 35 ~~KlklL~~V~~~l~k~~l~~~~ld~giL~~l~~WL~PLpDgsLP~~~Ir~~lL~~L~~l----PI~~e~Lk~SglGkvv 110 (145)
T 2xpp_A 35 TGKIENVEEISDILMSKALQESLLDEGILDEIKGWLEPLPDKSMPNIKIRKRLLDVLKTM----KIHKEHLVTSGVGKIV 110 (145)
T ss_dssp CHHHHHHHHHHHHHTCTTTHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTS----CCCHHHHHHHCHHHHH
T ss_pred HHHHhhHHHHHHHHhhHHHHHHHHHcCHHHHHHHHhCcCCCCCCCCHHHHHHHHHHHHHC----CCCHHHhhcCCCCcch
Confidence 4788888999998888999999999998888877665 27889999999999987 4447778888888877
Q ss_pred HHhhccC-CCHHHHHHHHHHHHHH
Q psy14164 189 LTSIEHD-SNTTVQVKSLYAVSCL 211 (361)
Q Consensus 189 l~LL~~~-~~~~v~~~Al~ALS~l 211 (361)
+.+-.+. ..+..|+.|-.-+..-
T Consensus 111 ~~l~k~~~et~~nk~la~~Li~~W 134 (145)
T 2xpp_A 111 YFYSINPKESKEVRASAKALVQKW 134 (145)
T ss_dssp HHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred hhhhcCCccCHHHHHHHHHHHHHH
Confidence 7666553 3456777666555543
No 159
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=58.81 E-value=88 Score=26.93 Aligned_cols=126 Identities=16% Similarity=0.127 Sum_probs=75.9
Q ss_pred CCCHHhHHHHHHHHHhhcCCHHHHHHHHHHHHhcCCC---------------------CHHHHHHHHHHHHHhhcCccc-
Q psy14164 76 SMNEANRGFLLDALNSMMVNVGAELEKIIKTLKENQD---------------------QKDICIGALDNLSDYICSIDY- 133 (361)
Q Consensus 76 ~~s~e~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~~---------------------~~~~~~~Al~~L~~lve~idn- 133 (361)
.+|+|-+.++++.-+.+.. ...++++..|.+... +.......+.....++.|..-
T Consensus 4 ~LS~Elq~yf~~It~a~~~---~~r~~aL~sL~~D~gL~~LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N~~l~ 80 (196)
T 4atg_A 4 MLPKELQLYFDKILSMIKS---DMKDIAIECLEKESGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVF 80 (196)
T ss_dssp GSCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHCSSCTTTHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHCTTCC
T ss_pred ccCHHHHHHHHHHHHHHHh---HHHHHHHHHHhcCCChhhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCC
Confidence 5788888888877666653 456777777765331 112223333444444443221
Q ss_pred -HHHHHHCCCHHHHHHhhcC---CCHHHHHHHHHHHHHHhhc----CHHHHHHHHhcChHHHHHHhhc-cCCCHHHHHHH
Q psy14164 134 -ANDFLKMGGLPVLQPLLEG---SDPELRWRAAETVADIVQN----NPFSQNFIIQTDFLNLLLTSIE-HDSNTTVQVKS 204 (361)
Q Consensus 134 -a~~~~~~Gg~~~Lv~LL~s---~~~~vr~~Aa~~Lg~iaqn----n~~~q~~v~~~g~l~~Ll~LL~-~~~~~~v~~~A 204 (361)
-.-++. -+|+++.|+=+ ....+|..|+.+|+.++.. ++..+.. ++..|.+.+. ...+...+.-|
T Consensus 81 lepYlH~--LipsvLtCll~k~l~~~~LRd~AA~lL~~I~~~~~~~y~~L~~R-----I~~tl~k~l~dp~~~l~t~YGA 153 (196)
T 4atg_A 81 IDPYLHQ--ILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPR-----VLKTLKGVWMDPNRSEDSQYGA 153 (196)
T ss_dssp CGGGHHH--HHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTTTSTTHHHH-----HHHHHHHHHTCTTSCHHHHHHH
T ss_pred hHHHHHH--HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHhCccCchHHHH-----HHHHHHHHHcCCCCChHHHHHH
Confidence 122333 37888887632 2338999999999999864 2333332 3445555443 34567888889
Q ss_pred HHHHHHH
Q psy14164 205 LYAVSCL 211 (361)
Q Consensus 205 l~ALS~l 211 (361)
++.|+.+
T Consensus 154 i~GL~~l 160 (196)
T 4atg_A 154 LYCLSIL 160 (196)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999887
No 160
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=54.89 E-value=60 Score=26.38 Aligned_cols=90 Identities=13% Similarity=0.190 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHH
Q psy14164 152 GSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVL 231 (361)
Q Consensus 152 s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~L 231 (361)
.+-+.|.....|++-+. ..-.. ++..+-+.+.. ..+.-+-.++|-+-+|+++........+..+..+.+
T Consensus 22 nSk~~I~~LT~~a~~~~-----~~a~~-----Iv~~i~~~i~k-~~p~~KL~~LYL~DsIvkN~g~~y~~~F~~~l~~~f 90 (144)
T 1sz9_A 22 NSRPIITTLTKLAEENI-----SCAQY-----FVDAIESRIEK-CMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLY 90 (144)
T ss_dssp CCHHHHHHHHHHHHHTG-----GGHHH-----HHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHH
T ss_pred ccHhHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHhcc-CCHhhHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 34456666666666543 22222 34444555554 467899999999999999765555666667777788
Q ss_pred HHhhccCCHHHHHHHHHHHHH
Q psy14164 232 LRCIQSKKEKLVIKSCFLIAC 252 (361)
Q Consensus 232 v~lL~s~~~~v~~kA~~ll~~ 252 (361)
.+.....+..+|.+...++.-
T Consensus 91 ~~~~~~~d~~~r~k~~rL~~~ 111 (144)
T 1sz9_A 91 KRTYLLVDNTTRTKLINMFKL 111 (144)
T ss_dssp HHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHH
Confidence 887777788888888876653
No 161
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=53.48 E-value=1.6e+02 Score=32.40 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhc-cCCCHHHHHHHHHHHHHHhcCC----hhhHHHHHhhCc
Q psy14164 153 SDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIE-HDSNTTVQVKSLYAVSCLVREN----EECLKEFIKRDG 227 (361)
Q Consensus 153 ~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~-~~~~~~v~~~Al~ALS~l~r~~----~~~~~~f~~~gg 227 (361)
.+..+|..|-..|..+-++. .+...+...|. .+.+..+|-.|+..|-+.++.+ ++..+..++...
T Consensus 25 ~~~~~r~~Ae~~L~~~~~~p----------~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e~k~~Ir~~l 94 (1204)
T 3a6p_A 25 STQRYRLEALKFCEEFKEKC----------PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSV 94 (1204)
T ss_dssp CCHHHHHHHHHHHHHHHHHC----------TTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGGGSCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhCc----------hHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence 37788999988887764322 13333443332 4457789999999999887641 344555555555
Q ss_pred HHHHHHhhcc---CCHHHHHHHHHHHHHHhcCC-chHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhc
Q psy14164 228 FSVLLRCIQS---KKEKLVIKSCFLIACLCTDN-NQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKD 301 (361)
Q Consensus 228 i~~Lv~lL~s---~~~~v~~kA~~ll~~L~~~~-~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~ 301 (361)
+..+...-.. .+..++.+++.+++.++..+ |+.- -++++.|+.++.+ +...++.++.+|..|...
T Consensus 95 l~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~W-----p~ll~~L~~~~~~----~~~~~e~~L~iL~~L~Ee 163 (1204)
T 3a6p_A 95 MELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHW-----PDMLIELDTLSKQ----GETQTELVMFILLRLAED 163 (1204)
T ss_dssp HHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTC-----TTHHHHHHHHHHT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcccc-----hHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHH
Confidence 5555543221 46899999999999988652 3211 2567788888765 345678888888888653
No 162
>3l3f_X Protein DOA1, DOA1/UFD3; armadillo-like repeat structure, nucleus, UBL conjugation PA protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=53.45 E-value=1.1e+02 Score=29.02 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc-
Q psy14164 158 RWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ- 236 (361)
Q Consensus 158 r~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~- 236 (361)
|.++..++.-++..-+.. +.+..++.-......+..+--++.+++|+-.+..-..+.+....-...+++.+.
T Consensus 180 ~FP~LDLLRl~v~~~~~~-------~~l~~li~~~~~~~~~~n~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~ 252 (362)
T 3l3f_X 180 KTPAYDIVRLIVKKLPYS-------SDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDT 252 (362)
T ss_dssp CHHHHHHHHHHGGGCSCG-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSCS
T ss_pred cchHHHHHHHHhcCCChH-------HHHHHHHHHhcCCCChhHHHHHHHHHHHhccCcchHHHHHhcchhHHHHHHHHHH
Confidence 778888888887654422 233334332222356789999999999998754423333322111233343331
Q ss_pred -------cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccC----CC--CCChhHHHHHHHHHHHHHhcCh
Q psy14164 237 -------SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDI----ED--ALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 237 -------s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~----~~--~~d~~~~e~al~aL~~L~~~~~ 303 (361)
+.+..++.-++.++.|++.-....+. +...+..++.+|.. .+ ..|.+..-.+|-||.+|+...+
T Consensus 253 ~~~~~~~~~nkNl~IA~ATL~lNlAv~~~~~~~---~~el~~~l~~~l~~~~g~~E~~~~d~EA~yRlLVALGtL~~~~~ 329 (362)
T 3l3f_X 253 EFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEP 329 (362)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTCS---CTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCH
T ss_pred HhhhcccCCCchHHHHHHHHHHHHHHHHhcccc---hHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCH
Confidence 22567889999999998753110000 12344556666651 00 1177888888999999997776
Q ss_pred HHHH
Q psy14164 304 EAQS 307 (361)
Q Consensus 304 ~~~~ 307 (361)
....
T Consensus 330 ~~~~ 333 (362)
T 3l3f_X 330 TLRQ 333 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 163
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=52.96 E-value=56 Score=29.22 Aligned_cols=141 Identities=14% Similarity=0.130 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhh-
Q psy14164 157 LRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCI- 235 (361)
Q Consensus 157 vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL- 235 (361)
-+.++..++.-++.+-+.. +.+..++.-.....++..+.-++.+++|+-.+.....+.+....-...++..+
T Consensus 70 ~~fP~lDllRl~~~~~~~~-------~~l~~~l~~~~~~~~~~~~ml~lR~l~NlF~~~~~g~~l~~~~~~~~~i~~~i~ 142 (253)
T 3gae_A 70 IKTPAYDIVRLIVKKLPYS-------SDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETID 142 (253)
T ss_dssp CCHHHHHHHHHHGGGCSCG-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHTTHHHHSC
T ss_pred ccchHHHHHHHHHcCCchH-------HHHHHHHHHhcCCCchhHHHHHHHHHHHcccCCchHHHHHhcchhHHHHHHHHH
Confidence 3666777777666544321 22333332222234678999999999999986543455554332233334333
Q ss_pred ---c----cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccC----CC--CCChhHHHHHHHHHHHHHhcC
Q psy14164 236 ---Q----SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDI----ED--ALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 236 ---~----s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~----~~--~~d~~~~e~al~aL~~L~~~~ 302 (361)
. +.+..+|.-++.++.|++......+. +......++.++.. .+ ..|.+..-.++-||.+++..+
T Consensus 143 ~~~~~~~~~~~~nl~iA~ATl~~N~av~~~~~~~---~~e~~~~l~~~i~~~~~~~e~~~~d~Ea~yR~LvAlGtL~~~~ 219 (253)
T 3gae_A 143 TEFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVE 219 (253)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTSCS---CTTHHHHHHHHHHTTTTTSHHHHHSHHHHHHHHHHHHHHHHHS
T ss_pred HHhhhcccCCchhHHHHHHHHHHHHHHHHhhccc---hHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCc
Confidence 1 12567888999999988753100000 12234445555542 10 116677778888999999766
Q ss_pred hHHHH
Q psy14164 303 PEAQS 307 (361)
Q Consensus 303 ~~~~~ 307 (361)
+...+
T Consensus 220 ~~~~~ 224 (253)
T 3gae_A 220 PTLRQ 224 (253)
T ss_dssp GGGGC
T ss_pred HHHHH
Confidence 65443
No 164
>3pst_A Protein DOA1; protein degradation, CDC48, ubiquitin, nuclear protein; 2.00A {Saccharomyces cerevisiae} PDB: 3psp_A
Probab=52.46 E-value=1.7e+02 Score=28.31 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhc-
Q psy14164 158 RWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQ- 236 (361)
Q Consensus 158 r~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~- 236 (361)
|.++..++.-++..-+.. +.+..++.-.........+--++.+++|+-.+.......+....-...+++.+.
T Consensus 243 ~FPaLDLLRl~v~~p~~~-------~~l~~li~~~l~~~~~an~MltlR~laNlF~~~~~g~~ll~~~~~~~~i~~~i~~ 315 (425)
T 3pst_A 243 KTPAYDIVRLIVKKLPYS-------SDIKDYIEEGLGNKNITLTMLTVRILVNCFNNENWGVKLLESNQVYKSIFETIDT 315 (425)
T ss_dssp CHHHHHHHHHHGGGCSCG-------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTTCTTTHHHHHTSHHHHHHHHHHSCC
T ss_pred ccHHHHHHHHHHcCCchH-------HHHHHHHHHhcCCCChhHHHHHHHHHHHhcCCcchHHHHhhCchhHHHHHHHHHH
Confidence 778888888887665432 223333332222356789999999999998754423333322222445555442
Q ss_pred -------cCCHHHHHHHHHHHHHHhcCCchHHHHHHhCCcHHHHHHhccC--C-C---CCChhHHHHHHHHHHHHHhcCh
Q psy14164 237 -------SKKEKLVIKSCFLIACLCTDNNQVKQVLLSMGMVEQMCVLIDI--E-D---ALDTEMNEHLLSALASLIKDSP 303 (361)
Q Consensus 237 -------s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~g~i~~Lv~lL~~--~-~---~~d~~~~e~al~aL~~L~~~~~ 303 (361)
+.+..++.-++.++.|++.-....+. +...+..++.+|.. . . ..|.+..-.+|-||.+|+...+
T Consensus 316 ~l~~~~~~~nkNl~IA~ATLllNlAv~~~~~~~---~~el~~~l~e~l~~~~g~~E~~~~d~EA~yRlLVALGtLv~~~~ 392 (425)
T 3pst_A 316 EFSQASAKQSQNLAIAVSTLIFNYSALVTKGNS---DLELLPIVADAINTKYGPLEEYQECEEAAYRLTVAYGNLATVEP 392 (425)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCS---CTTHHHHHHHHHHHTTTTSHHHHTSHHHHHHHHHHHHHHHHHCH
T ss_pred HhhhcccCCCchHHHHHHHHHHHHHHHHhcccc---hHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHHHhcCH
Confidence 12467889999999998753110000 12344556666651 0 0 1177888888999999997666
Q ss_pred HHHHh
Q psy14164 304 EAQSL 308 (361)
Q Consensus 304 ~~~~~ 308 (361)
.....
T Consensus 393 ~~~~~ 397 (425)
T 3pst_A 393 TLRQF 397 (425)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 165
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=51.73 E-value=1e+02 Score=26.52 Aligned_cols=119 Identities=11% Similarity=0.102 Sum_probs=70.2
Q ss_pred hHHHHHHhhccC-----CCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccC---CHHHHHHHHHHHHHHhc
Q psy14164 184 FLNLLLTSIEHD-----SNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSK---KEKLVIKSCFLIACLCT 255 (361)
Q Consensus 184 ~l~~Ll~LL~~~-----~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~---~~~v~~kA~~ll~~L~~ 255 (361)
.+|.+++.+.+. .+...-...+..+.++..+. ...-.-+-+--+|.++.|+-+. ...+|..|+.+++.++.
T Consensus 41 LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N~-~l~lepYlH~LipsvLtCll~k~l~~~~LRd~AA~lL~~I~~ 119 (196)
T 4atg_A 41 LVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNK-HVFIDPYLHQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYD 119 (196)
T ss_dssp THHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHCT-TCCCGGGHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC-CCChHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 577777665431 24445555666666666643 2211122234567777766432 33899999999999997
Q ss_pred C----CchHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHHhcChHHHHhhccC
Q psy14164 256 D----NNQVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLIKDSPEAQSLCRLE 312 (361)
Q Consensus 256 ~----~~~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~~ 312 (361)
. .+..+.. ++..+.+.|.++ +..+ ..-..|+..+..-++++++.+--|
T Consensus 120 ~~~~~y~~L~~R-----I~~tl~k~l~dp---~~~l-~t~YGAi~GL~~lG~~~vr~~llP 171 (196)
T 4atg_A 120 TYSRSYKTLAPR-----VLKTLKGVWMDP---NRSE-DSQYGALYCLSILSKNVVNTVIRE 171 (196)
T ss_dssp HHTTTSTTHHHH-----HHHHHHHHHTCT---TSCH-HHHHHHHHHHHHHCHHHHHTHHHH
T ss_pred HhCccCchHHHH-----HHHHHHHHHcCC---CCCh-HHHHHHHHHHHHhHHHHHHHhhhc
Confidence 5 2333333 455666666655 4334 334667777777778888766333
No 166
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=49.03 E-value=1.8e+02 Score=27.66 Aligned_cols=107 Identities=14% Similarity=0.201 Sum_probs=74.4
Q ss_pred cChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhc------
Q psy14164 182 TDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCT------ 255 (361)
Q Consensus 182 ~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~------ 255 (361)
.++++.++.+-.. .+..+|+-.+.-|.-.+....... ...++.|..+|.+.+..|.+++..+.+++..
T Consensus 62 ~~fl~~il~f~~d-~~~~vRk~~a~FieEa~~~~~el~-----~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f~~i 135 (386)
T 3o2t_A 62 DNFLDEIIAFQAD-KSIEVRKFVIGFIEEACKRDIELL-----LKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWM 135 (386)
T ss_dssp GGGHHHHHGGGGC-SCHHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC-CcHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999988774 678999999999988876443332 2346678888888899999998877776641
Q ss_pred --CCc------hHHHHHHhCCcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 256 --DNN------QVKQVLLSMGMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 256 --~~~------~~~~~l~~~g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
+.. ..-..+. .+-..++.++.+. +..++..++..+..++
T Consensus 136 ~~~~~~~~~~e~~W~~m~--~lK~~Il~~~ds~---n~GVrl~aiKFle~VI 182 (386)
T 3o2t_A 136 VKSRVISELQEACWDMVS--AMAGDIILLLDSD---NDGIRTHAIKFVEGLI 182 (386)
T ss_dssp HHC-CCCHHHHHHHHHHH--HHHHHHHHGGGCS---SHHHHHHHHHHHHHHH
T ss_pred hcCCCcchhHHHHHHHHH--HHHHHHHHHhccC---CcchHHHHHHHHHHHH
Confidence 111 1122221 2334567777777 8899999988888766
No 167
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=47.34 E-value=2e+02 Score=27.61 Aligned_cols=154 Identities=13% Similarity=0.127 Sum_probs=89.9
Q ss_pred HHHHHhhcCCCH-HHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 144 PVLQPLLEGSDP-ELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 144 ~~Lv~LL~s~~~-~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
..|+.|-+.... .--.+=+.|+...+..+|.....++ ..|++.=-. ++..=..--+.-|..++..-++..-.-
T Consensus 216 ~vLlPLHk~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi-----~~LLk~WP~-tns~KevlFL~Ele~iLe~~~~~~f~~ 289 (403)
T 3fga_B 216 KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVV-----MALLKYWPK-THSPKEVMFLNELEEILDVIEPSEFVK 289 (403)
T ss_dssp HTTTGGGGSTTGGGTHHHHHHHHHHHHHHCGGGHHHHH-----HHHHHTCCS-SCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHHHHhCchhHHHHH-----HHHHHhCCC-CCcHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 344444444332 2223445666667777777665543 334443332 233334456666777776554432222
Q ss_pred HhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhcCCchHHHHHHhC--CcHHH----HHHhccCCCCCChhHHHHHHHHHH
Q psy14164 223 IKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCTDNNQVKQVLLSM--GMVEQ----MCVLIDIEDALDTEMNEHLLSALA 296 (361)
Q Consensus 223 ~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~--g~i~~----Lv~lL~~~~~~d~~~~e~al~aL~ 296 (361)
+....+..+..++.|++.+|-.+|.++.. ++.....+.+. -+++. |.+..+..+ +..++..+..++.
T Consensus 290 i~~~lf~~la~ci~S~hfqVAErAL~~wn-----Ne~i~~li~~n~~~IlPii~p~L~~~~~~HW--n~~v~~l~~~vlk 362 (403)
T 3fga_B 290 IMEPLFRQLAKCVSSPHFQVAERALYYWN-----NEYIMSLISDNAAKILPIMFPSLYRNSKTHW--NKTIHGLIYNALK 362 (403)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHHGGGG-----CHHHHHHHHTTHHHHHHHHHHHHHHTTSCCS--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHhc-----cHHHHHHHHHhHHHHHHHHHHHHHHHHHHcc--CHHHHHHHHHHHH
Confidence 22456778889999999999999987652 22222222111 12333 333333223 7899999999999
Q ss_pred HHHhcChHHHHhhc
Q psy14164 297 SLIKDSPEAQSLCR 310 (361)
Q Consensus 297 ~L~~~~~~~~~~~~ 310 (361)
.+...++...+.|.
T Consensus 363 ~l~e~d~~lF~~~~ 376 (403)
T 3fga_B 363 LFMEMNQKLFDDCT 376 (403)
T ss_dssp HHHTTSCCCCCTTH
T ss_pred HHHHhCHHHHHHHH
Confidence 99999998888774
No 168
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=43.55 E-value=1.5e+02 Score=24.98 Aligned_cols=95 Identities=11% Similarity=0.111 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhc------CCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHH
Q psy14164 115 DICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLE------GSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLL 188 (361)
Q Consensus 115 ~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~------s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~L 188 (361)
-.|+.-|..+...+...+....|...|++..+-.-|. -|+..||...+.+|.++ |-.++.+.+.|....+
T Consensus 50 l~KLkmL~~V~~~L~k~~L~~~~ld~giL~~l~~WLePLpDgSLP~~~Ir~~lL~~L~~l----PI~~e~Lk~SglGkvV 125 (170)
T 3nfq_A 50 MQKVKLLPKVVSVLSKANLADTILDNNLLQSVRIWLEPLPDGSLPSFEIQKSLFAALNDL----PVKTEHLKESGLGRVV 125 (170)
T ss_dssp CHHHHHHHHHHHHHTCGGGHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTS----CCCHHHHHHHSHHHHH
T ss_pred HHHHhhHHHHHHHHhHHHHHHHHHHcchHHHHHHHhCcCCCCCCCcHHHHHHHHHHHHHC----CCCHHHHhhCCCCcee
Confidence 4688889999999988999999999999988877665 27789999999999976 4446777778877777
Q ss_pred HHhhccC-CCHHHHHHHHHHHHHHhc
Q psy14164 189 LTSIEHD-SNTTVQVKSLYAVSCLVR 213 (361)
Q Consensus 189 l~LL~~~-~~~~v~~~Al~ALS~l~r 213 (361)
+-+-.+. ..+..++.|-.-|+.-.|
T Consensus 126 ~~l~k~~~et~~nkrla~~Li~~WsR 151 (170)
T 3nfq_A 126 IFYTKSKRVEAQLARLAEKLIAEWTR 151 (170)
T ss_dssp HHHHHCTTSCHHHHHHHHHHHHHHTC
T ss_pred eehhcCCcccHHHHHHHHHHHHHHHH
Confidence 6665542 345777777666665544
No 169
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=37.71 E-value=31 Score=28.52 Aligned_cols=94 Identities=11% Similarity=0.213 Sum_probs=62.5
Q ss_pred HHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhcc-CCHHHHHHHHHHHHHHhcC-CchHHHHHHhCCcHHH-HHHhccCC
Q psy14164 204 SLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQS-KKEKLVIKSCFLIACLCTD-NNQVKQVLLSMGMVEQ-MCVLIDIE 280 (361)
Q Consensus 204 Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s-~~~~v~~kA~~ll~~L~~~-~~~~~~~l~~~g~i~~-Lv~lL~~~ 280 (361)
.+--|+-+++..+..- ..++..|..-|.+ .+..++..|..++-.++.+ +..+...+.+..++.. |+.++...
T Consensus 36 ~ileicD~In~~~~~p-----keA~ral~KRl~~~~n~~~~l~AL~LLe~cvkNCG~~fh~eiask~Fl~e~L~kl~~~~ 110 (152)
T 3rru_A 36 QFMHICDIINTTQDGP-----KDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPR 110 (152)
T ss_dssp HHHHHHHHHHHSTTHH-----HHHHHHHHHHHTTCCBHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHTTTTGGGGSGG
T ss_pred HHHHHHHHHhCCCccH-----HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHhhHhHHHHHHHHhcCC
Confidence 4455555555443321 1234566666664 5888888899988888876 6667777777777764 77777642
Q ss_pred CCCChhHHHHHHHHHHHHHhcC
Q psy14164 281 DALDTEMNEHLLSALASLIKDS 302 (361)
Q Consensus 281 ~~~d~~~~e~al~aL~~L~~~~ 302 (361)
......++++++..|...+..-
T Consensus 111 ~~~~~~Vk~kil~li~~Wa~~F 132 (152)
T 3rru_A 111 YNLPLDIQNRILNFIKTWSQGF 132 (152)
T ss_dssp GCCCHHHHHHHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHHHHHHHHHHHh
Confidence 1114579999999998888654
No 170
>1bwx_A Parathyroid hormone; peptide hormone, solution structure; NMR {Homo sapiens} SCOP: j.15.1.1 PDB: 1zwf_A 1zwg_A* 2l1x_A
Probab=33.42 E-value=27 Score=22.00 Aligned_cols=17 Identities=12% Similarity=0.104 Sum_probs=13.8
Q ss_pred CCHHhHHHHHHHHHhhc
Q psy14164 77 MNEANRGFLLDALNSMM 93 (361)
Q Consensus 77 ~s~e~~~~L~eal~~~~ 93 (361)
-+.+|+.||++.|+.+-
T Consensus 16 q~~~R~~WLq~~L~~vH 32 (39)
T 1bwx_A 16 NSMERVEWLRKKLQDVH 32 (39)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 46789999999987663
No 171
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=32.98 E-value=29 Score=37.53 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHhhc----CcccHHHHHHCCCHHHHHHhhcCCC-HHHHHHHHHHHHHH
Q psy14164 97 GAELEKIIKTLKENQ---DQKDICIGALDNLSDYIC----SIDYANDFLKMGGLPVLQPLLEGSD-PELRWRAAETVADI 168 (361)
Q Consensus 97 ~~~mk~~l~~L~~~~---~~~~~~~~Al~~L~~lve----~idna~~~~~~Gg~~~Lv~LL~s~~-~~vr~~Aa~~Lg~i 168 (361)
.+.+..++..+.... .+- .+..+|.-+.-++- .+..... ...+..++.+|.++. .+||..|+.+|+.+
T Consensus 796 ~~~~~~~l~~l~~~~~~s~sW-~R~~~L~~lq~~~f~n~f~l~~~~~---~~i~~~v~~~L~D~q~~EVRe~Aa~tLsgl 871 (997)
T 1vsy_5 796 KNHVAAIVDYVCSSNVALSSN-QTKLQLAFIQHFLSAELLQLTEEEK---NKILEFVVSNLYNEQFVEVRVRAASILSDI 871 (997)
T ss_dssp HHHHHHHHHHSSCTTTTSCSS-SHHHHHHHHHHHHHHHTTTSCTTHH---HHTHHHHTTTTTCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHcCHHHH---HHHHHHHHHHhcCCccHHHHHHHHHHHHHH
Confidence 445566666665433 234 77777766555442 1111111 134778888999999 99999999999999
Q ss_pred hhcC-H-HHHHHHHhcChHHHHHHhhcc-----------CCCHHHHHHHHHHHHHHhcCChhhH--HHHHhhCcHHHHHH
Q psy14164 169 VQNN-P-FSQNFIIQTDFLNLLLTSIEH-----------DSNTTVQVKSLYAVSCLVRENEECL--KEFIKRDGFSVLLR 233 (361)
Q Consensus 169 aqnn-~-~~q~~v~~~g~l~~Ll~LL~~-----------~~~~~v~~~Al~ALS~l~r~~~~~~--~~f~~~ggi~~Lv~ 233 (361)
.+.. + .....+ +..+-+.+.. ..+...|-.|+-+||+++..+|-.. -.++ -..+..|..
T Consensus 872 l~c~~~~~~~~~l-----i~~f~~~~~~~~~~~~~~~~~~~~~~~rH~aVLgL~AlV~a~Py~vP~P~w~-P~~l~~La~ 945 (997)
T 1vsy_5 872 VHNWKEEQPLLSL-----IERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAIISAFPYVFPLPPWI-PKNLSNLSS 945 (997)
T ss_dssp HHSCCSHHHHHHH-----HHHHTTSSTTTSSCHHHHHHHHHHCHHHHHHHHHHHHHHTTCSCCSSCCTHH-HHHHHHHHT
T ss_pred HHcCCchhhHHHH-----HHHHHHHHhhcccccccccccchHHHHHHHHHHHHHHHHhhCCCCCCCCccc-HHHHHHHHH
Confidence 9887 5 222222 2222222211 0011345567888888887766442 1222 111222222
Q ss_pred hhccCCHHHHHHHHHHHHHHhc
Q psy14164 234 CIQSKKEKLVIKSCFLIACLCT 255 (361)
Q Consensus 234 lL~s~~~~v~~kA~~ll~~L~~ 255 (361)
.+.++. -++.-+--+++.+-.
T Consensus 946 ~~~~~~-~i~~tvk~tlseFkr 966 (997)
T 1vsy_5 946 WARTSG-MTGNAAKNTISEFKK 966 (997)
T ss_dssp TSSSCS-SHHHHTHHHHHHHHH
T ss_pred HhCCCC-chHHHHHHHHHHHHh
Confidence 233322 255555556666544
No 172
>1et1_A Parathyroid hormone; helical dimer, hormone/growth factor complex; 0.90A {Homo sapiens} SCOP: j.15.1.1 PDB: 1hpy_A 1zwa_A 1hph_A 1zwb_A 1zwd_A 1zwc_A 1zwe_A 1hth_A* 1fvy_A 3c4m_C*
Probab=32.11 E-value=26 Score=21.43 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=11.9
Q ss_pred CHHhHHHHHHHHHhh
Q psy14164 78 NEANRGFLLDALNSM 92 (361)
Q Consensus 78 s~e~~~~L~eal~~~ 92 (361)
+-+||.||++.|..+
T Consensus 17 ~~~R~~WLq~~l~~v 31 (34)
T 1et1_A 17 SMERVEWLRKKLQDV 31 (34)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 356999999988764
No 173
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=31.82 E-value=2.8e+02 Score=24.71 Aligned_cols=130 Identities=13% Similarity=0.144 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHH-hhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHh
Q psy14164 156 ELRWRAAETVADI-VQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRC 234 (361)
Q Consensus 156 ~vr~~Aa~~Lg~i-aqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~l 234 (361)
+.+...+.=+-.+ ..++|..- ..+++.++.+.. +++..+|+..+.-|.-.++..+.. -...++.|..+
T Consensus 30 ~~kl~~L~qa~el~~~~dp~ll-----~~~l~~il~~~~-~~~~~vrk~~~~Fi~e~~~~k~~l-----~~~~l~~L~~L 98 (257)
T 3gs3_A 30 STKCELLAKVQETVLGSCAELA-----EEFLESVLSLAH-DSNMEVRKQVVAFVEQVCKVKVEL-----LPHVINVVSML 98 (257)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGH-----HHHHHHHHGGGG-CSCHHHHHHHHHHHHHHHHHCGGG-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHhHH-----HHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 4555555555553 33344322 236777777654 477899999999998887654432 23456788888
Q ss_pred hccCCHHHHHHHHHHHHHHhc--------CCc---hHHHHHHhC-CcHHHHHHhccCCCCCChhHHHHHHHHHHHHH
Q psy14164 235 IQSKKEKLVIKSCFLIACLCT--------DNN---QVKQVLLSM-GMVEQMCVLIDIEDALDTEMNEHLLSALASLI 299 (361)
Q Consensus 235 L~s~~~~v~~kA~~ll~~L~~--------~~~---~~~~~l~~~-g~i~~Lv~lL~~~~~~d~~~~e~al~aL~~L~ 299 (361)
|.+.+..|.+++..+.+++.. ... ...+..-.. .+-..++.++.+. +..++..++..+..++
T Consensus 99 l~d~d~~V~K~~I~~~~~iY~~~l~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~---n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 99 LRDNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNE---NDGIRTNAIKFLEGVV 172 (257)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSS---CHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccC---CcchHHHHHHHHHHHH
Confidence 888899999999887776642 111 011221111 2344677778877 8899999998888876
No 174
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=29.51 E-value=52 Score=35.60 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=67.6
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhcc---CCCHHHHHHHHHHHH-----HHhcC
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEH---DSNTTVQVKSLYAVS-----CLVRE 214 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~---~~~~~v~~~Al~ALS-----~l~r~ 214 (361)
+.-|+.+-.|..++||..|-.+|-++.+--+.+... ++|.+++.|+. +.+..--+-|+|.|. ..+.+
T Consensus 135 l~dL~~Ls~S~Y~~VR~~AQ~~L~~~~~~~~gs~~~-----iip~ll~~L~~~~~~~~~~~iKGaLy~L~~k~~~~~~~~ 209 (997)
T 1vsy_5 135 LVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGV-----VINKIIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMT 209 (997)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTTBTTHHHH-----HHHHHHHHHHHHHHTCSCHHHHHHHHHTTSHHHHHHGGG
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHhcccHHHH-----HHHHHHHHHhccccCCCHHHHHHHHHHHhhhhhhhHHhc
Confidence 445566667889999999999999999877766654 57888888865 445566677888766 22222
Q ss_pred ChhhHHHHHhhCcHHHHHHhhccCCHHHHHHHHHHHHHHhc
Q psy14164 215 NEECLKEFIKRDGFSVLLRCIQSKKEKLVIKSCFLIACLCT 255 (361)
Q Consensus 215 ~~~~~~~f~~~ggi~~Lv~lL~s~~~~v~~kA~~ll~~L~~ 255 (361)
+.... .--++.|+++...+.+.++.-+-.+...+..
T Consensus 210 d~~~~-----~~~~~ali~~~~~dKpsI~~l~~~l~~~i~~ 245 (997)
T 1vsy_5 210 DYKDI-----GRLIFLLIECCRVNELEIGMYADKILTDIVI 245 (997)
T ss_dssp CHHHH-----HHHHHHHHHTCSCSSSSTTTHHHHHHHHHHT
T ss_pred ChHHH-----HHHHHHHHHhCcCCCHHHHHHHHHHHHHHHh
Confidence 22222 2346778888776666666555544444443
No 175
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=29.46 E-value=3.6e+02 Score=25.35 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHhhcCccc-----------------HHHHHHCCCHHHHHHhhcCC---
Q psy14164 97 GAELEKIIKTLKENQDQ---KDICIGALDNLSDYICSIDY-----------------ANDFLKMGGLPVLQPLLEGS--- 153 (361)
Q Consensus 97 ~~~mk~~l~~L~~~~~~---~~~~~~Al~~L~~lve~idn-----------------a~~~~~~Gg~~~Lv~LL~s~--- 153 (361)
...+.+.+..|.+..-+ -.....+|+.|..++.+.++ .+-|...|.+..|+.+|..+
T Consensus 227 ~~~l~~f~~~l~~~~i~~~~~~~v~~~L~dLi~F~~~~~~~~~~~l~~~~g~p~r~RQkLlrEq~il~ll~~iL~~~f~~ 306 (381)
T 1n4k_A 227 SKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTD 306 (381)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTTSCCSSCSGGGGGCCCCHHHHHHHHHTTHHHHHHHHHHGGGC-
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhcCcchhcccchhhhcCCccHHHHHHHHhhChHHHHHHHHHhhccc
Confidence 45566666666643333 24566777888887765532 13367888899999988553
Q ss_pred C-------------------HHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcC
Q psy14164 154 D-------------------PELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRE 214 (361)
Q Consensus 154 ~-------------------~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~ 214 (361)
+ ..|-..+-++|..++++|..+|..+.+ .++.+...+.. + ..|..+|..|+.+
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~i~~l~Y~LL~~~~~~~r~Nq~y~ak--~~~~~q~qig~--~----~~a~d~i~~ll~n 378 (381)
T 1n4k_A 307 CGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAK--QFGFMQKQIGY--D----VLAEDTITALLHN 378 (381)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH--HHHHHHHHHCT--T----HHHHHHHHHHHTT
T ss_pred cCccchhhHHHhcchhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--HHHHHHHHhCc--c----ccHHHHHHHHHhc
Confidence 1 125566788899999999999988855 57766666653 2 4566677777766
Q ss_pred Ch
Q psy14164 215 NE 216 (361)
Q Consensus 215 ~~ 216 (361)
|.
T Consensus 379 N~ 380 (381)
T 1n4k_A 379 NR 380 (381)
T ss_dssp C-
T ss_pred CC
Confidence 53
No 176
>3jxy_A Alkylpurine DNA glycosylase ALKD; heat repeat, DNA binding, DNA glycosylase, DNA alkylation, L complex, hydrolase-DNA complex; HET: DNA; 1.50A {Bacillus cereus} SCOP: a.118.1.0 PDB: 3jx7_A* 3bvs_A 3jy1_A* 3jxz_A*
Probab=26.18 E-value=3.1e+02 Score=23.56 Aligned_cols=166 Identities=16% Similarity=0.106 Sum_probs=88.5
Q ss_pred CHHhHHHHHHHHHhhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCcccHHHHHHCCCHHHHHHhhc-CCCHH
Q psy14164 78 NEANRGFLLDALNSMMVNVGAELEKIIKTLKENQDQKDICIGALDNLSDYICSIDYANDFLKMGGLPVLQPLLE-GSDPE 156 (361)
Q Consensus 78 s~e~~~~L~eal~~~~~~~~~~mk~~l~~L~~~~~~~~~~~~Al~~L~~lve~idna~~~~~~Gg~~~Lv~LL~-s~~~~ 156 (361)
.|+.|+.-++..+.....+.....+.+..|-.. .-.|.+.-|+..+.......+. ..++.+-.++. -++-.
T Consensus 40 ~P~lR~laK~~~k~~~~~~~~~~~~~~~~L~~~-~~~E~r~~ai~~l~~~~k~~~~-------~~l~~~~~~l~~~~nWd 111 (232)
T 3jxy_A 40 TPERRQLLKDIIQIHTLPDQKDFQIIIRELWDL-PEREFQAAALDIMQKYKKHINE-------THIPFLEELIVTKSWWD 111 (232)
T ss_dssp HHHHHHHHHHHHHHHCCCCGGGHHHHHHHHHTS-SBHHHHHHHHHHHHHTGGGCCG-------GGHHHHHHHHTSSCCHH
T ss_pred hHHHHHHHHHHHHhccccchhhHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHccCCChH
Confidence 456666666655544311111112233333332 2346777777766544322211 11333333443 24444
Q ss_pred HHHH-HHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhh
Q psy14164 157 LRWR-AAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCI 235 (361)
Q Consensus 157 vr~~-Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL 235 (361)
+... |..++|.+...+|. ...+.+...+.+ .+.-+|+.|+-.+ +......... ..+..+..++
T Consensus 112 ~~D~~a~~~~g~~~~~~p~--------~~~~~l~~W~~s-~~~w~rR~ai~~~--l~~~~~~d~~-----~~~~~i~~~~ 175 (232)
T 3jxy_A 112 SVDSIVPTFLGDIFLKHPE--------LISAYIPKWIAS-DNIWLQRAAILFQ--LKYKQKMDEE-----LLFWIIGQLH 175 (232)
T ss_dssp HHHHHTTTHHHHHHHHCGG--------GGGGTHHHHHHS-SCHHHHHHHHHTT--TTCGGGCCHH-----HHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHCHH--------HHHHHHHHHhcC-CchHHHHHHHHHH--HHHHhCCCHH-----HHHHHHHHhc
Confidence 4433 34677777766654 133455566665 5677777776543 2211000001 1234556677
Q ss_pred ccCCHHHHHHHHHHHHHHhcCCchHHHHHHhC
Q psy14164 236 QSKKEKLVIKSCFLIACLCTDNNQVKQVLLSM 267 (361)
Q Consensus 236 ~s~~~~v~~kA~~ll~~L~~~~~~~~~~l~~~ 267 (361)
.+++.-||+-+.|+|+.+...+|+....+++.
T Consensus 176 ~d~~~yV~kAvgW~Lr~~~k~~p~~v~~fl~~ 207 (232)
T 3jxy_A 176 SSKEFFIQKAIGWVLREYAKTNPDVVWEYVQN 207 (232)
T ss_dssp TCCCHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 88899999999999999988888766665543
No 177
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=24.21 E-value=5e+02 Score=25.18 Aligned_cols=139 Identities=12% Similarity=0.135 Sum_probs=81.4
Q ss_pred HHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHHHhhCcHHHHHHhhccCCHH
Q psy14164 162 AETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEFIKRDGFSVLLRCIQSKKEK 241 (361)
Q Consensus 162 a~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f~~~ggi~~Lv~lL~s~~~~ 241 (361)
+.|+...+..+|.....+ +..|++.=-. ++..=.+--+.-|..++..-++..-.=+....+..|.+++.|.+.+
T Consensus 268 ~ycv~qf~eKDp~L~~~v-----i~~LLk~WP~-tns~KevlFL~eleeile~~~~~ef~~i~~~lF~~la~ci~S~hfq 341 (449)
T 2npp_B 268 AYCVVQFLEKDSTLTEPV-----VMALLKYWPK-THSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQ 341 (449)
T ss_dssp HHHHHHHHHHCGGGHHHH-----HHHHHHTCCS-SCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHH
T ss_pred HHHHHHHHhcCcHhHHHH-----HHHHHHhCCC-CCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 345555555566555443 2333333322 2323334456667777765444322222245677888999999999
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHhC--CcHHHHHHhccCC--CCCChhHHHHHHHHHHHHHhcChHHHHhhcc
Q psy14164 242 LVIKSCFLIACLCTDNNQVKQVLLSM--GMVEQMCVLIDIE--DALDTEMNEHLLSALASLIKDSPEAQSLCRL 311 (361)
Q Consensus 242 v~~kA~~ll~~L~~~~~~~~~~l~~~--g~i~~Lv~lL~~~--~~~d~~~~e~al~aL~~L~~~~~~~~~~~~~ 311 (361)
|-.+|+++.. ++.....+.+. -+++.+..-|... +.=+..++..+..++..+...++.....|..
T Consensus 342 VAErAL~~w~-----N~~i~~li~~n~~~IlPii~p~L~~~s~~HWn~~V~~la~~vlk~l~e~d~~lf~~c~~ 410 (449)
T 2npp_B 342 VAERALYYWN-----NEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQ 410 (449)
T ss_dssp HHHHHHGGGG-----CHHHHHHHHTTHHHHHHHHHHHHTSCTTCCSSTTHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHC-----CHHHHHHHHhchhhhHHhhHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 9999986543 22222222211 1345555544221 1116789999999999999999998888843
No 178
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=23.07 E-value=96 Score=24.37 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=39.3
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcC
Q psy14164 144 PVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRE 214 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~ 214 (361)
...+.-|+.+...|+..+.|++-+.- .-..+ +..+.+.+... ...-|...+|.+..++++
T Consensus 10 ~~~L~~L~~s~~sI~~~s~w~l~~~~-----~a~~i-----v~~i~~~l~~~-~~~~KL~~LYLindIl~n 69 (135)
T 4fu3_A 10 EKKLSELSNSQQSVQTLSLWLIHHRK-----HAGPI-----VSVWHRELRKA-KSNRKLTFLYLANDVIQN 69 (135)
T ss_dssp HHHHHHCCSSTTHHHHHHHHHHHTGG-----GHHHH-----HHHHHHHHHHS-CTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHccccHHHHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHHhc-ccchhHHHHHHHHHHHHH
Confidence 33455567778899999999997643 22222 33445555543 335788999999999753
No 179
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=22.95 E-value=2.7e+02 Score=26.59 Aligned_cols=146 Identities=15% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKEF 222 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~f 222 (361)
+..|+.++.|+++.=|..-..+|-.+=..-...+..+.+. .-..+.+.+.......-....+..++++++|+....+.-
T Consensus 176 i~~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~-i~nif~~fiye~e~~~GIaeLLeilgsIIngfa~PLKee 254 (392)
T 2jak_A 176 VLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQ-INNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEE 254 (392)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHH-HHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCHH
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccCCCCCHHHHHHHHHHHHhccCCCCcHH
Q ss_pred HhhCcHHHHHHhhccC-CHHHHHHHHHHHHHHhcCCchHHHHHHh-----------------------------------
Q psy14164 223 IKRDGFSVLLRCIQSK-KEKLVIKSCFLIACLCTDNNQVKQVLLS----------------------------------- 266 (361)
Q Consensus 223 ~~~ggi~~Lv~lL~s~-~~~v~~kA~~ll~~L~~~~~~~~~~l~~----------------------------------- 266 (361)
-..=-...|+.+.+.. -...-..-+.++..++..++.....+++
T Consensus 255 hk~Fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~eleeiLe~~~~~~f~~ 334 (392)
T 2jak_A 255 HKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVK 334 (392)
T ss_dssp HHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHhHhhccCCcHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHH
Q ss_pred --CCcHHHHHHhccCCCCCChhHHHHHH
Q psy14164 267 --MGMVEQMCVLIDIEDALDTEMNEHLL 292 (361)
Q Consensus 267 --~g~i~~Lv~lL~~~~~~d~~~~e~al 292 (361)
.-+...+..++.++ +-++-|.|+
T Consensus 335 i~~~lF~~la~ci~S~---hfqVAErAL 359 (392)
T 2jak_A 335 IMEPLFRQLAKCVSSP---HFQVAERAL 359 (392)
T ss_dssp HHHHHHHHHHHHHTCS---SHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC---cHHHHHHHH
No 180
>4flb_A Regulation of nuclear PRE-mRNA domain-containing; structural genomics consortium, SGC, protein binding; 1.80A {Homo sapiens}
Probab=22.47 E-value=81 Score=24.77 Aligned_cols=62 Identities=5% Similarity=0.032 Sum_probs=43.2
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHhhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCC
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADIVQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVREN 215 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~ 215 (361)
+...++-|+.+...|+..+.|++-+.- .-.. ++..+.+.+.. .++.-|...+|.+..++++.
T Consensus 10 l~~~L~~L~~s~~sI~~~s~w~l~h~~-----~a~~-----Iv~~i~~~l~~-~~~~~KL~~LYL~ndIl~ns 71 (132)
T 4flb_A 10 LDRKFQSVTNTMESIQGLSSWCIENKK-----HHST-----IVYHWMKWLRR-SAYPHRLNLFYLANDVIQNC 71 (132)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHTGG-----GHHH-----HHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCcccHHHHHHHHHHHHHhHH-----HHHH-----HHHHHHHHHHc-CChhhHHHHHHHHHHHHHHh
Confidence 444556667778899999999998643 2222 34445555655 45678999999999999754
No 181
>2ccq_A P97, peptide N-glycanase homolog; glycoprotein; 1.6A {Homo sapiens} SCOP: d.314.1.1 PDB: 2hpl_A 2hpj_A 2cm0_A
Probab=21.75 E-value=1.5e+02 Score=22.38 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=28.4
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhhc----------------CHHHHHHHHhc-ChHHHHHH
Q psy14164 144 PVLQPLLEGSDPELRWRAAETVADIVQN----------------NPFSQNFIIQT-DFLNLLLT 190 (361)
Q Consensus 144 ~~Lv~LL~s~~~~vr~~Aa~~Lg~iaqn----------------n~~~q~~v~~~-g~l~~Ll~ 190 (361)
...+..|...+.+....|..+|..++.| |+..|+.+... |++..|..
T Consensus 4 ~~~l~~L~~n~~~~~~~a~~tL~k~l~Nil~~P~e~KyR~Ir~~N~~f~~~v~~~~G~~e~L~a 67 (99)
T 2ccq_A 4 SPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAVECLFE 67 (99)
T ss_dssp SHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHCTTCGGGGEEETTCHHHHHHTTTSTTHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCCcccceeecCCHHHHHHhcCCccHHHHHHH
Confidence 3445556665666666666666665554 77777777655 55555444
No 182
>3jxy_A Alkylpurine DNA glycosylase ALKD; heat repeat, DNA binding, DNA glycosylase, DNA alkylation, L complex, hydrolase-DNA complex; HET: DNA; 1.50A {Bacillus cereus} SCOP: a.118.1.0 PDB: 3jx7_A* 3bvs_A 3jy1_A* 3jxz_A*
Probab=21.40 E-value=1.2e+02 Score=26.37 Aligned_cols=78 Identities=6% Similarity=0.028 Sum_probs=51.5
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHH-hhcCHHHHHHHHhcChHHHHHHhhccCCCHHHHHHHHHHHHHHhcCChhhHHH
Q psy14164 143 LPVLQPLLEGSDPELRWRAAETVADI-VQNNPFSQNFIIQTDFLNLLLTSIEHDSNTTVQVKSLYAVSCLVRENEECLKE 221 (361)
Q Consensus 143 ~~~Lv~LL~s~~~~vr~~Aa~~Lg~i-aqnn~~~q~~v~~~g~l~~Ll~LL~~~~~~~v~~~Al~ALS~l~r~~~~~~~~ 221 (361)
++.+...+.|++.-+|..|.-.+-.- -..++. ..++.+..++. +++.-|++...|+|.-+...++.....
T Consensus 133 ~~~l~~W~~s~~~w~rR~ai~~~l~~~~~~d~~--------~~~~~i~~~~~-d~~~yV~kAvgW~Lr~~~k~~p~~v~~ 203 (232)
T 3jxy_A 133 SAYIPKWIASDNIWLQRAAILFQLKYKQKMDEE--------LLFWIIGQLHS-SKEFFIQKAIGWVLREYAKTNPDVVWE 203 (232)
T ss_dssp GGTHHHHHHSSCHHHHHHHHHTTTTCGGGCCHH--------HHHHHHHHHTT-CCCHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHhCCCHH--------HHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 35566677788887777765443111 111111 13334445555 467799999999999999999999999
Q ss_pred HHhhCcHH
Q psy14164 222 FIKRDGFS 229 (361)
Q Consensus 222 f~~~ggi~ 229 (361)
|++.+.++
T Consensus 204 fl~~~~l~ 211 (232)
T 3jxy_A 204 YVQNNELA 211 (232)
T ss_dssp HHHHSCCC
T ss_pred HHHHCCCC
Confidence 99876433
No 183
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=20.36 E-value=2e+02 Score=19.19 Aligned_cols=39 Identities=13% Similarity=-0.004 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhcChhhhHHHHHHHHHHHHHhcCCCCCc
Q psy14164 316 LKFKLNFIKEKHAGNEVYHKELEYVNSVLTEVFEEDSPE 354 (361)
Q Consensus 316 l~~~Le~~~~~l~~~~e~~~e~~~~~~il~~~f~~~~~~ 354 (361)
+.++|.+.+..-.-.+++.|-.+-|-+||++-|+.+.++
T Consensus 9 Ii~FL~~~~~~~~~s~D~~ESleVAiqCi~~aF~v~~~d 47 (52)
T 4gof_A 9 IIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVED 47 (52)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHhcccCCcCHhHHHHHHHHHHHHHHHcCCCccc
Confidence 345565555443335577888999999999999976644
Done!