RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14166
(264 letters)
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 95.7 bits (237), Expect = 5e-25
Identities = 53/132 (40%), Positives = 80/132 (60%)
Query: 109 LRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMT 168
+R+ +VL+G GVGR +K LI PD+F P+TTRP K EE+GK Y+FVSH+ M
Sbjct: 2 MRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMM 61
Query: 169 SLISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVLFI 228
IS + +E+G ++ +YGT +++ ++ G +A+L+ Q+LKVLR+ F P V+FI
Sbjct: 62 QDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVFI 121
Query: 229 APPPFAALKESR 240
A P
Sbjct: 122 AAPTITPGLNED 133
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 88.1 bits (217), Expect = 7e-22
Identities = 50/123 (40%), Positives = 73/123 (59%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSL 170
RPVVL GPSG G+S L ++L F +TTR +PGEEDGK+Y+FV+ E M
Sbjct: 1 RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRD 60
Query: 171 ISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVLFIAP 230
I+AG IE E+ G+LYGTS ++V + R+ VL+ Q ++ ++ P+ +F+ P
Sbjct: 61 IAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQP 120
Query: 231 PPF 233
P
Sbjct: 121 PSL 123
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 85.3 bits (210), Expect = 8e-21
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVT-PYTTRPKKPGEEDGKEYHFVSHETMTS 169
++ PSG G+S L + L+ P TQV+ +TTR +PGE G+ Y FV+H+
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKE 62
Query: 170 LISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVLFIA 229
+IS +E E G+ YGTS +++ +++ +G L+ +Q + +R +FI
Sbjct: 63 MISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFIL 122
Query: 230 PPPF 233
PP
Sbjct: 123 PPSK 126
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 84.2 bits (207), Expect = 1e-20
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSL 170
RP+V+ GPSG G+S L ++L A PD F TTR + GE +GK+Y+FVS + S+
Sbjct: 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSM 61
Query: 171 ISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRS-PAFKPLVLFIA 229
I + IE+ ++ G+ YG++ SV ++ SG+ +L+ Q +K +++ P LFIA
Sbjct: 62 IKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIA 121
Query: 230 PPPFAALKESRITAFARSPFDQYNSR 255
PP LK+ + N R
Sbjct: 122 PPSVEDLKKRLEG-RGTETEESINKR 146
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 78.0 bits (191), Expect = 5e-18
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 105 PMET-LRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVS 163
ME RP++++GP + L++ PDKF P+TTRPK+ E DG++YHFVS
Sbjct: 3 QMEVHYARPIIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVS 59
Query: 164 HET-MTSLISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFK 222
M I A K IE G+Y HLYGTS SV E+ G+ +L+ + +++ L++
Sbjct: 60 SREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLH 119
Query: 223 PLVLFIAPPPFAALK 237
P+ +FI P +
Sbjct: 120 PIAIFIRPRSLENVL 134
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 58.5 bits (140), Expect = 3e-11
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSL 170
R VVL GPS VG+S + R L P+ V+ TTR +PGE DG +YHF+ L
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHFSVS-ATTRAPRPGEVDGVDYHFIDPTRFQQL 61
Query: 171 ISAGKMIEFGEYKG--HLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVLFI 228
I G+++E+ E G H GT + V +G ++ + ++ + + +F+
Sbjct: 62 IDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFL 121
Query: 229 APPPFAALKESRITAFARSPFDQYNSR 255
APP + L+ R+ D R
Sbjct: 122 APPSWQDLQA-RLIGRGTETADVIQRR 147
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 35.8 bits (81), Expect = 0.002
Identities = 16/108 (14%), Positives = 33/108 (30%)
Query: 110 RRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTS 169
++ ++ GP+GVG+S +RL A + G E + T +
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKN 61
Query: 170 LISAGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLR 217
+ + L + E + A ++ +L
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILW 109
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 35.3 bits (80), Expect = 0.003
Identities = 17/137 (12%), Positives = 36/137 (26%), Gaps = 25/137 (18%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSL 170
++L G G G+S + L G + +
Sbjct: 5 NILLLSGHPGSGKSTIAEALA---------------------NLPGVPKVHFHSDDLWGY 43
Query: 171 ISAGKMIEF----GEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVL 226
I G++ + + + ++D G +L+ + + A +
Sbjct: 44 IKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLH 103
Query: 227 FIAPPPFAALKESRITA 243
+I AA R
Sbjct: 104 YIVLRTTAAEAIERCLD 120
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 33.4 bits (75), Expect = 0.013
Identities = 8/73 (10%), Positives = 22/73 (30%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
+++ G GVG++ L ++++ + R + + G +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62
Query: 173 AGKMIEFGEYKGH 185
+ G
Sbjct: 63 FFTSKKLVGSYGV 75
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 33.6 bits (75), Expect = 0.018
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 89 FDREEIPTYEEVAKLYPMETLRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR 147
FDRE+ E+ KL +++G G+S + + I + +
Sbjct: 15 FDREK-----EIEKL--KGLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFE 66
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 32.7 bits (73), Expect = 0.022
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 109 LRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYT 145
+R+ +V++G G++ L D+F +V T
Sbjct: 1 IRKKLVIVGDGACGKTCLLIVNSK---DQFPEVYVPT 34
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 32.7 bits (73), Expect = 0.028
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 106 METLRRPVVLIGPSGVGRSELKRRLI 131
M+T++ V++G VG++ L
Sbjct: 1 MQTIK--CVVVGDGAVGKTCLLISYT 24
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 32.0 bits (71), Expect = 0.036
Identities = 6/55 (10%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
++++G G G++ + RL + P + ++ +
Sbjct: 8 ILILGLDGAGKTTILYRLQV---GEVVTTIPTIGFNVETVTYKNLKFQVWDLGGL 59
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 32.6 bits (74), Expect = 0.038
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 16/136 (11%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVT---PYTTRPKKPGEEDGKEYHFVSHETMTS 169
++L+GPSG G++ R + L+ Q+ P+K K+ +
Sbjct: 32 MILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYA 91
Query: 170 LISAGKMIEFGEYKGHLYGTSS-------DSVLELVNSGRVAVLNPAY------QSLKVL 216
L + + + L V EL+ + P Q + +
Sbjct: 92 LYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALG 151
Query: 217 RSPAFKPLVLFIAPPP 232
R+ KP V + P
Sbjct: 152 RAIVRKPQVFLMDEPL 167
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 32.0 bits (72), Expect = 0.043
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHF 161
++LIG SGVG++ + R + T + E DGK
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKL 57
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.0 bits (71), Expect = 0.045
Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
++ +G G++ L L D+ + P T E F + +
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN---DRLATLQP--TWHPTSEELAIGNIKFTTFDLG 52
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 32.0 bits (71), Expect = 0.047
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
V+++G SGVG++ L + + + T K D + +T
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 58
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 31.2 bits (69), Expect = 0.058
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 110 RRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHF 161
++ ++ IG G G+S R IA +P F + R E+ EY +
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAKNPG-FYNINRDDYRQSIMAHEERDEYKY 52
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 31.3 bits (69), Expect = 0.064
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR 147
VVLIG GVG+S L + +
Sbjct: 6 VVLIGEQGVGKSTLANIFAG---VHDSMDSDCEVL 37
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 31.3 bits (70), Expect = 0.064
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
+VLIG +GVG++ L RR T K E +G++ +T
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 61
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 31.8 bits (72), Expect = 0.066
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDK 137
+ L+GP+G G+S L R+ + K
Sbjct: 28 LHLVGPNGAGKSTLLARMAGMTSGK 52
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 31.1 bits (69), Expect = 0.078
Identities = 13/55 (23%), Positives = 20/55 (36%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
VVL+G VG++ L R + T + K GK + +T
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTA 60
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 31.4 bits (70), Expect = 0.088
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Query: 113 VVLIGPSGVGRSELKRRLIA-LDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLI 171
V++ G G G+S R L A L + + P ++ + + T ++
Sbjct: 31 VLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVV 90
Query: 172 SAGKMIEFGEYKGHLYGTSS 191
+ G + + G
Sbjct: 91 D----LPLGVSEDRVVGALD 106
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 30.8 bits (68), Expect = 0.090
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
+++IG S VG++ L R A +F T T G + + + E + +
Sbjct: 5 IIVIGDSNVGKTCLTYRFCA---GRFPDRTEAT-----IGVDFRERAVDIDGERIKIQLW 56
Query: 173 AGK-MIEFGEYKGHLYGTSSDSVL 195
F + Y + +V+
Sbjct: 57 DTAGQERFRKSMVQHYYRNVHAVV 80
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 30.7 bits (68), Expect = 0.095
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR-PKKPGEEDGKEYHF 161
+ ++G + G+S L R + + + + KK DG+ +
Sbjct: 8 LGVLGDARSGKSSLIHRFLT---GSYQVLEKTESEQYKKEMLVDGQTHLV 54
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 31.3 bits (70), Expect = 0.10
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 8/37 (21%)
Query: 113 VVLIGPSGVGRSELKRRL--------IALDPDKFTQV 141
+++IGP+GVG++E+ RRL I ++ KFT+V
Sbjct: 52 ILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEV 88
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 30.4 bits (67), Expect = 0.11
Identities = 9/54 (16%), Positives = 24/54 (44%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
+V++G VG+S + +R K + T ++ + + ++ + +T
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDT 58
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 30.8 bits (68), Expect = 0.11
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYH 160
R ++L G S G+S + R L ++ P+ + + P + E
Sbjct: 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGG 53
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.5 bits (67), Expect = 0.12
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
V+L+G GVG+S L R ++ + +T + +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQ 58
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 30.4 bits (67), Expect = 0.13
Identities = 4/33 (12%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYT 145
++++G G++ + +L + P
Sbjct: 3 ILMVGLDAAGKTTILYKLKL---GEIVTTIPTI 32
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 30.2 bits (67), Expect = 0.13
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 8/117 (6%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
++IG GVG+S L + T + E G++ +T
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT------ 60
Query: 173 AGKMIEFGEYKGHLYGTSSDSVLELVNSGRVAVLNPAYQSLKVLRSPAFKPLVLFIA 229
AG+ E Y + L + + R + N L R+ V+ +
Sbjct: 61 AGQ--ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILI 115
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.5 bits (67), Expect = 0.13
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 110 RRPVVLIGPSGVGRSELKRRL 130
+R + L+GP G G+S + R+L
Sbjct: 2 KRNIFLVGPMGAGKSTIGRQL 22
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 30.3 bits (67), Expect = 0.14
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
V+L+G GVG+S L R + D T K E DG +T
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 62
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 30.3 bits (67), Expect = 0.14
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 109 LRRPVVLIGPSGVGRSELKRRL 130
+ P+ ++G G G + + R L
Sbjct: 1 MTEPIFMVGARGCGMTTVGREL 22
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.4 bits (67), Expect = 0.15
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 109 LRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYT 145
++ +V++G S G++ L D F + T
Sbjct: 1 VKCKIVVVGDSQCGKTALLHVFAK---DCFPENYVPT 34
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.0 bits (66), Expect = 0.16
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Query: 105 PMETLRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR--PKKPGEEDGKEYHFV 162
P ET + +V++G GVG+S L + I F T K DG
Sbjct: 3 PSETHK--LVVVGGGGVGKSALTIQFIQ---SYFVSDYDPTIEDSYTKICSVDGIPARLD 57
Query: 163 SHETM 167
+T
Sbjct: 58 ILDTA 62
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.7 bits (66), Expect = 0.19
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHF 161
++LIG SGVG+S L R + + T K + +GK+
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL 53
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 30.0 bits (66), Expect = 0.19
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYT 145
V+++G SGVG++ L R + DK++Q T
Sbjct: 5 VIILGDSGVGKTSLMHRYVN---DKYSQQYKAT 34
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 30.0 bits (67), Expect = 0.21
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
LIGP+G G++ R + L VT + + E K ++
Sbjct: 31 FGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPE--EAGAYR 88
Query: 173 AGKMIEFGEYKGHLYGTSSDSVLELVN 199
+ IE+ + Y +SS + E+V
Sbjct: 89 NMQGIEYLRFVAGFYASSSSEIEEMVE 115
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.6 bits (65), Expect = 0.21
Identities = 5/57 (8%), Positives = 22/57 (38%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTS 169
++++G G++ + ++ D D + + + + + +++ S
Sbjct: 5 LLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRS 61
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 30.3 bits (68), Expect = 0.22
Identities = 7/52 (13%), Positives = 14/52 (26%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSH 164
V LIG +G G++ + L + ++
Sbjct: 35 VTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALV 86
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 30.1 bits (67), Expect = 0.25
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKF----TQVTPYTTRPKKPGEEDGKEYHFVS 163
V + G +G G+S L + ++ T V T + F
Sbjct: 59 VAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 113
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 29.5 bits (66), Expect = 0.27
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 106 METLRRPVVLIGPSGVGRSELKRRLIA 132
++ V++ G SGVG+SE L+
Sbjct: 10 VDIYGLGVLITGDSGVGKSETALELVQ 36
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 29.5 bits (66), Expect = 0.27
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 106 METLRRPVVLIGPSGVGRSELKRRLIA 132
+E V+L G SG+G+SE LI
Sbjct: 11 LEVFGVGVLLTGRSGIGKSECALDLIN 37
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 29.3 bits (64), Expect = 0.27
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 107 ETLRRPVVLIGPSGVGRSELKRRLI 131
++ R + ++G VG+S L + +
Sbjct: 1 QSKSRKIAILGYRSVGKSSLTIQFV 25
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 29.5 bits (65), Expect = 0.30
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR 147
++L+G G++ L ++L + D T + +
Sbjct: 19 ILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIK 53
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.2 bits (64), Expect = 0.34
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
V + G GVG+S L R + F + T
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK---GTFRESYIPTV 35
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 29.2 bits (64), Expect = 0.34
Identities = 11/54 (20%), Positives = 19/54 (35%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
+V +G VG++ L R + D Q T K + + +T
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDT 56
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 29.2 bits (64), Expect = 0.34
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+VL+G G G++ +R +
Sbjct: 6 LVLVGDGGTGKTTFVKRHL 24
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 29.5 bits (66), Expect = 0.34
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 32/137 (23%)
Query: 97 YEEVAKLYPMETLRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDG 156
E++ K+ E PV++ G SGVG+ + R + L
Sbjct: 13 LEKIKKISCAEC---PVLITGESGVGKEVVARLIHKLSDRSKEPFVALN----------- 58
Query: 157 KEYHFVSHETMTSLISAGKMIEFGEYKGHLYGTSSDSV--LELVNSG-----RVAVLNPA 209
+ + + + FG KG G S EL + G + L+
Sbjct: 59 --VASIPRDIFEAEL-------FGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLE 109
Query: 210 YQS--LKVLRSPAFKPL 224
Q+ L+V+ S F L
Sbjct: 110 AQAKLLRVIESGKFYRL 126
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 29.2 bits (64), Expect = 0.36
Identities = 8/55 (14%), Positives = 15/55 (27%), Gaps = 6/55 (10%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
+++ GP G++ L L V P + D +
Sbjct: 6 IIIAGPQNSGKTSLLTLLTT------DSVRPTVVSQEPLSAADYDGSGVTLVDFP 54
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 29.1 bits (64), Expect = 0.38
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHET 166
VVLIG SGVG+S L R + + ++ T + + DGK +T
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 29.3 bits (65), Expect = 0.39
Identities = 6/42 (14%), Positives = 14/42 (33%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEE 154
V++GP+G G++ + ++ E
Sbjct: 29 FVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE 70
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 28.8 bits (63), Expect = 0.40
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+V++G GVG+S L +LI
Sbjct: 6 LVVVGAGGVGKSALTIQLI 24
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 28.8 bits (63), Expect = 0.41
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+V++G GVG+S L + I
Sbjct: 8 LVVVGGGGVGKSALTIQFI 26
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 28.7 bits (63), Expect = 0.42
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V+++G GVG+S L + +
Sbjct: 7 VIMVGSGGVGKSALTLQFM 25
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 29.1 bits (64), Expect = 0.42
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
++ +G SGVG++ R +KF T
Sbjct: 8 LLALGDSGVGKTTFLYRYTD---NKFNPKFITTV 38
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 28.8 bits (63), Expect = 0.43
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
+ + G +GVG+S L R + +F T
Sbjct: 5 LAIFGRAGVGKSALVVRFLT---KRFIWEYDPTL 35
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 28.7 bits (63), Expect = 0.43
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 111 RPVVLIGPSGVGRSELKRRL 130
+ +V IG G G+S L R L
Sbjct: 1 KNIVFIGFMGSGKSTLARAL 20
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 28.9 bits (63), Expect = 0.45
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+V++G GVG+S L +
Sbjct: 7 LVVVGDGGVGKSALTIQFF 25
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 28.7 bits (63), Expect = 0.46
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
++IG +GVG+S L + +F V T + + + +
Sbjct: 6 YIIIGDTGVGKSCLLLQFTD---KRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 57
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 28.8 bits (63), Expect = 0.49
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
V++G VG++ L D F + T
Sbjct: 12 CVVVGDGAVGKTCLLMSYAN---DAFPEEYVPTV 42
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.8 bits (63), Expect = 0.50
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+V++G GVG+S L + +
Sbjct: 6 LVVLGSGGVGKSALTVQFV 24
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 28.8 bits (63), Expect = 0.51
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
R V+ +G G++ L RL+ ++ T
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLT---GQYRDTQTSIT 33
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.7 bits (63), Expect = 0.52
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
VV++G GVG+S L + +
Sbjct: 6 VVVLGSGGVGKSALTVQFV 24
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 28.4 bits (62), Expect = 0.62
Identities = 4/58 (6%), Positives = 16/58 (27%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSL 170
++++G G++ + +L + + + + L
Sbjct: 15 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPL 72
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 28.8 bits (64), Expect = 0.62
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
VV +GPSG G+S L R + L+ +
Sbjct: 29 VVFVGPSGCGKSTLLRMIAGLETITSGDLF 58
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 28.4 bits (62), Expect = 0.64
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V L+G +GVG+S + R +
Sbjct: 7 VCLLGDTGVGKSSIMWRFV 25
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 28.5 bits (63), Expect = 0.75
Identities = 9/48 (18%), Positives = 17/48 (35%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYH 160
++GPSG G++ R + LD ++ G+
Sbjct: 34 FGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPED 81
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.0 bits (62), Expect = 0.75
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 111 RPVVLIGPSGVGRSELKRRLIA 132
V++ G SG+G+SE LI
Sbjct: 16 VGVLITGDSGIGKSETALELIK 37
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 28.1 bits (61), Expect = 0.76
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+VL+G + VG+S + R +
Sbjct: 6 LVLLGEAAVGKSSIVLRFV 24
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.1 bits (61), Expect = 0.79
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+VL+G S VG+S L R +
Sbjct: 9 LVLLGESAVGKSSLVLRFV 27
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 28.4 bits (63), Expect = 0.83
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
VL+GP+G G+S + +
Sbjct: 27 CVLLGPTGAGKSVFLELIAGIVK 49
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 28.4 bits (63), Expect = 0.85
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
++IGP+G G+S L +
Sbjct: 33 TLIIGPNGSGKSTLINVITGFLK 55
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 27.7 bits (60), Expect = 0.88
Identities = 5/33 (15%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYT 145
+ L+G G++ + + +F + T
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS---GQFNEDMIPT 34
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 28.3 bits (62), Expect = 0.89
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 83 LAETDDFDREEIPTYEEVAKLYPMETLRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
L E+ + + T + + + P + + G G G+S L + +V
Sbjct: 28 LVESRHPRHQALST-QLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVA 86
Query: 143 PYTTRPKKP 151
P P
Sbjct: 87 VIAVDPSSP 95
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.9 bits (61), Expect = 0.96
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
+++IG S VG++ R
Sbjct: 8 ILIIGNSSVGKTSFLFRYA 26
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.7 bits (60), Expect = 1.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V++G VG++ L
Sbjct: 8 CVVVGDGAVGKTCLLISYT 26
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.6 bits (60), Expect = 1.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
++IG +G G+S L + I
Sbjct: 8 FLVIGNAGTGKSCLLHQFI 26
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 1.1
Identities = 11/80 (13%), Positives = 19/80 (23%), Gaps = 3/80 (3%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
+V +G G++ L L D+ Q P + G +
Sbjct: 16 LVFLGLDNAGKTTLLHMLK---DDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARR 72
Query: 173 AGKMIEFGEYKGHLYGTSSD 192
K +D
Sbjct: 73 VWKNYLPAINGIVFLVDCAD 92
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 27.6 bits (60), Expect = 1.1
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPY 144
++++G G G++ + RL + P
Sbjct: 20 ILILGLDGAGKTTILYRLQ---IGEVVTTKPT 48
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.5 bits (60), Expect = 1.1
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 106 METLRRPVVLIGPSGVGRSELKRRLI 131
+ TL+ +++IG SGVG+S L R
Sbjct: 5 LTTLK--ILIIGESGVGKSSLLLRFT 28
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 27.9 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTT 146
++LIG SGVG+S L R D +T T
Sbjct: 9 LLLIGNSGVGKSCLLLRFSD---DTYTNDYISTI 39
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 27.5 bits (60), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V+L+G SGVG++ L R
Sbjct: 9 VMLVGDSGVGKTCLLVRFK 27
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 27.6 bits (60), Expect = 1.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 113 VVLIGPSGVGRSELKRRL 130
VL+G G G+S + RRL
Sbjct: 4 AVLVGLPGSGKSTIGRRL 21
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 27.7 bits (60), Expect = 1.2
Identities = 13/79 (16%), Positives = 23/79 (29%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
VL+G SG G+S + + F R G+ + + ++
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALN 68
Query: 173 AGKMIEFGEYKGHLYGTSS 191
K L S+
Sbjct: 69 DAAFAMQRTNKVSLIVCSA 87
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 27.7 bits (60), Expect = 1.2
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTR 147
++ G S VG+S L RL P TR
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKV--RRGKRPGVTR 35
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.3
Identities = 3/19 (15%), Positives = 10/19 (52%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V+++G G++ + +
Sbjct: 18 VIIVGLDNAGKTTILYQFS 36
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 27.5 bits (61), Expect = 1.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
V ++GPSG G+S + + LD
Sbjct: 34 VSIMGPSGSGKSTMLNIIGCLDK 56
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.3 bits (59), Expect = 1.6
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 111 RPVVLIGPSGVGRSELKRRL 130
+ V ++G G+S L +L
Sbjct: 8 KTVAILGGESSGKSVLVNKL 27
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.0 bits (58), Expect = 1.6
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
VV+ G G+S L L
Sbjct: 4 VVIAGRPNAGKSSLLNALA 22
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 27.5 bits (61), Expect = 1.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
+ +IG SG G+S R + L+
Sbjct: 31 ISIIGSSGSGKSTFLRCINFLEK 53
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 1.6
Identities = 10/49 (20%), Positives = 19/49 (38%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHF 161
++L G GVG++ L + L + K+ V + D +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCP 55
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 27.7 bits (61), Expect = 1.7
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 98 EEVAKLYPMETLRR----PVVLIGPSGVGRS----ELKRRLIALD-PDKFTQVTPYTT 146
EE+ ++ ++ L R VLIG GVG++ L +R++ D P+ +
Sbjct: 29 EEIRRV--IQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSL 84
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 26.9 bits (58), Expect = 1.8
Identities = 6/59 (10%), Positives = 16/59 (27%), Gaps = 4/59 (6%)
Query: 113 VVLIGPSGVGRS----ELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
+++ G G G++ + L + ++ + E E
Sbjct: 8 ILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDR 66
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 27.2 bits (60), Expect = 1.8
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
V GP+G+G++ L + + ++
Sbjct: 30 VNFHGPNGIGKTTLLKTISTYLKPLKGEII 59
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 27.0 bits (60), Expect = 1.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
+VL+GPSG G++ R + L+
Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLEE 57
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 27.0 bits (58), Expect = 2.0
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETM 167
V+++G VG+S L +L+ + TR + F +T
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKK-AIVEDEEGVTRDPVQDTVEWYGKTFKLVDTC 56
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 26.6 bits (57), Expect = 2.6
Identities = 11/90 (12%), Positives = 25/90 (27%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
+ ++G VG+S L +L+ ++ T +G +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 173 AGKMIEFGEYKGHLYGTSSDSVLELVNSGR 202
+ + V+ +V R
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTR 97
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 25.4 bits (55), Expect = 2.8
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 2 RAGIIPSKALQERKILHERSLMENGDTNSNPS 33
G IPSK ER+ + G ++ +
Sbjct: 55 DIGFIPSKRRVERREWSRLKAKDWGSSSGSQG 86
>d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 186
Score = 26.3 bits (57), Expect = 3.6
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 132 ALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHE 165
+D +K+ + Y EE G +Y F +E
Sbjct: 150 EIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYE 183
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.1 bits (56), Expect = 3.9
Identities = 5/30 (16%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
++L+G G+S +++ + V
Sbjct: 5 LLLLGTGESGKSTFIKQMR---IIHGSGVP 31
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 26.3 bits (57), Expect = 4.0
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 11/101 (10%)
Query: 83 LAETDDFDREEIPTYEEVAKLYPMETLRRPVVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
L + D+ D + E +L L LIGP+G G++ + + L
Sbjct: 46 LKKQDNQDSNVELEHLEEVELSKSNIL-----LIGPTGSGKTLMAQTLAKHLDIPIAISD 100
Query: 143 PYTTRPKKPGEEDGKEYHFVSHETMTSLISAGKMIEFGEYK 183
+ E G V + L ++ ++ +
Sbjct: 101 ATSLT------EAGYVGEDVENILTRLLQASDWNVQKAQKG 135
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 26.0 bits (57), Expect = 4.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
+ ++G SG G+S L + + + QV
Sbjct: 32 IGIVGRSGSGKSTLTKLIQRFYIPENGQVL 61
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.1 bits (56), Expect = 4.2
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 111 RPVVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEED 155
R V L GP GVG++ L + + V + T + G
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRR 46
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 25.9 bits (55), Expect = 4.3
Identities = 11/56 (19%), Positives = 17/56 (30%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMT 168
+ L G S VG+S LI T P T+ + + +
Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGF 81
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 25.8 bits (55), Expect = 4.5
Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
V L+G G+S L + P K T P E +E F + +
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHP-KIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEG 62
Query: 173 AGKMIEFGE 181
A + G
Sbjct: 63 ASEGKGLGL 71
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 184
Score = 25.9 bits (56), Expect = 4.7
Identities = 5/36 (13%), Positives = 12/36 (33%)
Query: 30 SNPSLGPCGPRLDAACIPLVKIADTVYSSPSKAKSP 65
++ + + V + +TV K + P
Sbjct: 120 HGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCP 155
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 25.9 bits (55), Expect = 4.7
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Query: 100 VAKLYPMETLRRPVVLI-GPSGVGRSELKRRLIAL------DPDKFTQVTPYTTRPKKPG 152
+ ++T R V+ I G S G++ L +L F R K+
Sbjct: 11 CKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYH 70
Query: 153 EEDGKEYHF 161
+ + + +
Sbjct: 71 TGNEEWFEY 79
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 26.0 bits (57), Expect = 4.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 113 VVLIGPSGVGRSELKRRLIALDP 135
+IG SG G+S L R + L+
Sbjct: 34 YGVIGASGAGKSTLIRCVNLLER 56
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 26.1 bits (57), Expect = 4.8
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 110 RRPVVLI-GPSGVGRSELKRRLIAL 133
+ P++ + G SG G S +K +
Sbjct: 3 KHPIISVTGSSGAGTSTVKHTFDQI 27
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 25.7 bits (55), Expect = 5.0
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
+V++G VG+S L RL+ D P TTR E + F +T
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDR-AIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 173 AGKMIEF 179
++E
Sbjct: 62 TNDLVER 68
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 25.7 bits (55), Expect = 5.5
Identities = 8/70 (11%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Query: 88 DFDREEIPTYEEVAKLYPMETLRRP-----VVLIGPSGVGRSELKRRLIALDPDKFTQVT 142
+F ++ ++ + +L G G G++ L+ + +
Sbjct: 5 NFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVID 64
Query: 143 PYTTRPKKPG 152
T + + P
Sbjct: 65 NDTFKQQHPN 74
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 25.7 bits (55), Expect = 5.5
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMTSLIS 172
V L+G VG+S L + + P K T P E FV + +
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKP-KIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEG 62
Query: 173 AGKMIEFGEY 182
A + + G
Sbjct: 63 AHQGVGLGHQ 72
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 25.5 bits (54), Expect = 5.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 113 VVLIGPSGVGRSELKRRLI 131
V ++G VG+S L L+
Sbjct: 8 VAIVGKPNVGKSTLLNNLL 26
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 25.1 bits (54), Expect = 6.5
Identities = 13/99 (13%), Positives = 22/99 (22%), Gaps = 29/99 (29%)
Query: 2 RAGIIPSKALQERKILHERSLMENGDTNSNPSLGPCGPRLDAACIPLVKIADTVYSSPSK 61
G IPS E + + + S
Sbjct: 76 EIGFIPSPLRLENIRIQQEQ-----------------------------KRKRFHGGKSS 106
Query: 62 AKSPTGLSCSAAVKTKKIIYDLAETDDFDREEIPTYEEV 100
S + L + + A+ + IP Y+ V
Sbjct: 107 GNSSSSLGEMVSGTFRATPTTTAKQKQKVTKHIPPYDVV 145
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.5 bits (55), Expect = 7.1
Identities = 4/18 (22%), Positives = 12/18 (66%)
Query: 113 VVLIGPSGVGRSELKRRL 130
++L+G G+S + +++
Sbjct: 9 LLLLGAGESGKSTIVKQM 26
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 25.4 bits (54), Expect = 7.2
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Query: 112 PVVLI-GPSGVGRSELKRRL 130
PV+ I GPSG G+ L + +
Sbjct: 4 PVITIDGPSGAGKGTLCKAM 23
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 25.3 bits (54), Expect = 7.4
Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 112 PVV-LIGPSGVGRSELKRRLIALDPDKFTQV 141
P++ SG G++ L ++LI + +
Sbjct: 3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRP 33
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 25.3 bits (55), Expect = 7.8
Identities = 7/27 (25%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 113 VVLIGPSGVGRSELKRRLIA--LDPDK 137
+ + G +G G++ L LI L+ +
Sbjct: 65 LAITGSTGSGKTSLL-MLILGELEASE 90
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 25.2 bits (54), Expect = 8.4
Identities = 7/56 (12%), Positives = 15/56 (26%), Gaps = 1/56 (1%)
Query: 113 VVLIGPSGVGRSELKRRLIALDPDKFTQVTPYTTRPKKPGEEDGKEYHFVSHETMT 168
++++G GVG+S +I + +T
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGERVVS-ISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 89
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 978,016
Number of extensions: 44344
Number of successful extensions: 247
Number of sequences better than 10.0: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 130
Length of query: 264
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 180
Effective length of database: 1,254,276
Effective search space: 225769680
Effective search space used: 225769680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.5 bits)