Query psy14168
Match_columns 276
No_of_seqs 151 out of 892
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 21:10:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14168.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14168hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v9d_A Diaphanous protein homo 100.0 6.1E-58 2.1E-62 427.2 12.6 244 21-273 6-253 (340)
2 3obv_E Protein diaphanous homo 100.0 1.7E-56 5.8E-61 431.5 16.8 239 27-274 83-325 (457)
3 2j1d_G DAAM1, disheveled-assoc 100.0 6.7E-56 2.3E-60 430.6 20.9 260 5-273 44-336 (483)
4 4eah_A Formin-like protein 3, 100.0 4.5E-55 1.6E-59 415.8 21.2 243 5-254 48-311 (402)
5 1ux5_A BNI1 protein; structura 100.0 2.8E-53 9.7E-58 404.7 12.2 260 7-273 42-338 (411)
6 2b3g_B Cellular tumor antigen 51.5 5.8 0.0002 22.2 1.1 21 1-21 8-28 (28)
7 3twe_A Alpha4H; unknown functi 32.3 65 0.0022 17.6 3.4 23 232-254 3-25 (27)
8 3kpe_A Fusion glycoprotein F0; 31.3 90 0.0031 20.3 4.6 42 130-173 2-43 (51)
9 3v86_A De novo design helix; c 26.5 85 0.0029 17.1 3.7 23 234-256 4-26 (27)
10 3tq2_A KE1; parallel three hel 25.9 38 0.0013 19.7 1.8 22 103-124 13-34 (36)
11 4eah_A Formin-like protein 3, 25.3 38 0.0013 31.3 2.8 49 1-49 116-165 (402)
12 3pk1_B Apoptosis regulator BAX 24.6 24 0.00081 21.0 0.8 23 151-173 3-25 (34)
13 2yy0_A C-MYC-binding protein; 23.0 82 0.0028 20.5 3.3 31 228-258 17-47 (53)
No 1
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=6.1e-58 Score=427.22 Aligned_cols=244 Identities=21% Similarity=0.293 Sum_probs=210.5
Q ss_pred hhHHHHHHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCChhhhhHHHHhccCCCHHHHHHHHHHHhCCCCCC
Q psy14168 21 DEEKCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLEREKLLSMLPTDEEKCKILEAVSANPGVP 100 (276)
Q Consensus 21 ~~~~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~~e~l~~~~Ll~~~Pt~eE~~~l~~~~~~~~~~~ 100 (276)
+++++.|+++||||++|+|++++ ++..++++||+.||..+|+.+.| +.|++++||+||++.+++|. +++ ..
T Consensus 6 ~~~i~vLD~kraqNi~I~L~~~k-----~~~~ei~~aI~~~D~~~L~~e~l--~~L~~~~Pt~eE~~~l~~~~-~~~-~~ 76 (340)
T 1v9d_A 6 VKELKVLDSKTAQNLSIFLGSFR-----MPYQEIKNVILEVNEAVLTESMI--QNLIKQMPEPEQLKMLSELK-EEY-DD 76 (340)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHTCTTTCCHHHH--HHHHHHSCCHHHHHHHHTCG-GGG-GG
T ss_pred CCeeeecCHHHHhHHHHHHhhcC-----CCHHHHHHHHHhCCcccCCHHHH--HHHHccCCCHHHHHHHHHhh-CCh-hh
Confidence 34556678899999999999975 78888999999999999999999 99999999999999999995 444 58
Q ss_pred CChHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcC-C---Ccc
Q psy14168 101 LGSAENFLLELSNINELVARLKLWAFKLDYENLEREVAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLN-G---TEV 176 (276)
Q Consensus 101 L~~~E~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lN-G---g~A 176 (276)
|++||||++.|+.||++..||+||.|+.+|++.++++.+.+..+..||++|++|++|+.+|++||++||||| | |+|
T Consensus 77 L~~~EqF~~~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A 156 (340)
T 1v9d_A 77 LAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGA 156 (340)
T ss_dssp SCHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC-------------------
T ss_pred cCHHHHHHHHHHCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 4 599
Q ss_pred cceeccccccccccccCCCcchHHHHHHHHHHhhCCCccchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 177 KGFQIEYLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQSTDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLI 256 (276)
Q Consensus 177 ~GFkL~sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~ll~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~ 256 (276)
+||+|+||.||.||||+|+++|||||||+++.+++|++++|.+||++|..|++||+++|.+++.+|+++++.++.+++.+
T Consensus 157 ~GFkL~sL~KL~d~Ks~d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~ 236 (340)
T 1v9d_A 157 FGFNISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNF 236 (340)
T ss_dssp -----CCHHHHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeehHHHHhhhhhcCCCCCccHHHHHHHHHHHhCchhccchhHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HhcCCCcchhhhhhhhc
Q psy14168 257 IKHDGSATSVKVKTQGA 273 (276)
Q Consensus 257 ~~~~~~~~~~~~~~~~~ 273 (276)
++...+.++|+.+|..|
T Consensus 237 ~~~~~~~d~f~~~m~~F 253 (340)
T 1v9d_A 237 PAATDEKDKFVEKMTSF 253 (340)
T ss_dssp CCCSSSSCCHHHHHHHH
T ss_pred ccccchhHHHHHHHHHH
Confidence 66555668999999876
No 2
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=1.7e-56 Score=431.53 Aligned_cols=239 Identities=21% Similarity=0.302 Sum_probs=226.9
Q ss_pred HHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCChhhhhHHHHhccCCCHHHHHHHHHHHhCCCCCCCChHHH
Q psy14168 27 ILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLEREKLLSMLPTDEEKCKILEAVSANPGVPLGSAEN 106 (276)
Q Consensus 27 i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~~e~l~~~~Ll~~~Pt~eE~~~l~~~~~~~~~~~L~~~E~ 106 (276)
|+++||||++|+|++++ ++..++++||+.||+.+|+.+.| +.|++++||+||++.|++|. ++. ..|++|||
T Consensus 83 LD~kraqNi~I~L~~lk-----~~~~ei~~aI~~~D~~~L~~e~l--~~L~~~~Pt~eE~~~l~~~~-~d~-~~L~~~Eq 153 (457)
T 3obv_E 83 LDSKTAQNLSIFLGSFR-----MPYQEIKNVILEVNEAVLTESMI--QNLIKQMPEPEQLKMLSELK-EEY-DDLAESEQ 153 (457)
T ss_dssp SCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHTCTTTCCHHHH--HHHHHHCCCHHHHHHHHTTT-TSG-GGSCHHHH
T ss_pred cCHHHHhHHHHHHhccC-----CCHHHHHHHHHhCCcccCCHHHH--HHHHHhCCCHHHHHHHHHhc-cCh-hhcCHHHH
Confidence 57789999999999975 78888999999999999999999 99999999999999999995 444 58999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcC-C---Ccccceecc
Q psy14168 107 FLLELSNINELVARLKLWAFKLDYENLEREVAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLN-G---TEVKGFQIE 182 (276)
Q Consensus 107 F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lN-G---g~A~GFkL~ 182 (276)
|++.|++||++..||+||+|+.+|++.+.++.+.+..+..||++|++|+.|+.+|++||++||||| | |+|+||+|+
T Consensus 154 F~~~l~~Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~ 233 (457)
T 3obv_E 154 FGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNIS 233 (457)
T ss_dssp HHHHHTSSTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGG
T ss_pred HHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhhccCCcCCCeeeEehH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 4 599999999
Q ss_pred ccccccccccCCCcchHHHHHHHHHHhhCCCccchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14168 183 YLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQSTDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLIIKHDGS 262 (276)
Q Consensus 183 sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~ll~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~~~~~ 262 (276)
||.||.|||++|+++||||||++++.+++|++++|.+||++|..|++||+++|..++++|.++++.++++++.+++...+
T Consensus 234 sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~~ 313 (457)
T 3obv_E 234 FLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDE 313 (457)
T ss_dssp GHHHHTTCBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCCCSST
T ss_pred HHHHHHhhhcCCCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988766566
Q ss_pred cchhhhhhhhcc
Q psy14168 263 ATSVKVKTQGAW 274 (276)
Q Consensus 263 ~~~~~~~~~~~~ 274 (276)
.++|+.+|..|-
T Consensus 314 ~d~f~~~m~~Fl 325 (457)
T 3obv_E 314 KDKFVEKMTSFV 325 (457)
T ss_dssp TCCHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 689999998764
No 3
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=6.7e-56 Score=430.59 Aligned_cols=260 Identities=24% Similarity=0.327 Sum_probs=237.1
Q ss_pred ccChhhhhHHhccCCCh---------------------------hHHHHHHHhhhcCCCcccccccchhhhccCHHHHHH
Q psy14168 5 VVNREGIEKLLSMLPTD---------------------------EEKCKILEAVSANPGVPLGSAENFLLELSNINELVA 57 (276)
Q Consensus 5 ~~~~~~iE~lf~~~~~~---------------------------~~~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~a 57 (276)
.++.+.+|.+|+..++. +++..|+++||||++|+|++++ ++..++++|
T Consensus 44 ~ld~~~lE~lF~~~~~~~~~~~~~~~~~k~~~s~~~~~~~~kk~~~v~lLD~kRaqNi~I~L~~lk-----~~~~ei~~a 118 (483)
T 2j1d_G 44 ILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLK-----LSNDEIKRA 118 (483)
T ss_dssp HSCHHHHHHHTBSBC-----------------------------CCBCCSCHHHHHHHHHHHHHHC-----CCHHHHHHH
T ss_pred ccCHHHHHHHHhhhccccccccccccccccccccccccccccCCCcceeCCHHHHHHHHHHHhcCC-----CCHHHHHHH
Confidence 36788999999853210 0112356789999999999964 788889999
Q ss_pred HhhcCc-cCCChhhhhHHHHhccCCCHHHHHHHHHHHhCCCCCCCChHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Q psy14168 58 RLKLWA-FKLDYENLEREKLLSMLPTDEEKCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLERE 136 (276)
Q Consensus 58 il~~D~-~~L~~e~l~~~~Ll~~~Pt~eE~~~l~~~~~~~~~~~L~~~E~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~ 136 (276)
|+.||+ ..|+.+.| +.|++++||+||++.+++|. +++ +.|++||||+++|+.||+|..||+||+|+.+|++.+.+
T Consensus 119 Il~~D~~~~L~~e~l--~~Ll~~~Pt~eE~~~l~~~~-~d~-~~L~~aEqFl~~l~~ip~~~~Rl~~l~f~~~f~~~~~~ 194 (483)
T 2j1d_G 119 ILTMDEQEDLPKDML--EQLLKFVPEKSDIDLLEEHK-HEL-DRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAE 194 (483)
T ss_dssp HHTTSTTCCCCHHHH--HHHHHSCCCHHHHHHHHTTT-TCG-GGBCHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCccccCCHHHH--HHHHHhCCCHHHHHHHHHhc-cCh-hhcCHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999 99999999999999999994 555 58999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcC-C--CcccceeccccccccccccC-CCcchHHHHHHHHHHhhCC
Q psy14168 137 VAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLN-G--TEVKGFQIEYLTKVPEVKDT-VHKHSLLHHLCDLVLHQFP 212 (276)
Q Consensus 137 l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lN-G--g~A~GFkL~sL~KL~d~Ks~-d~k~tLLhylv~~~~~~~p 212 (276)
+.+.+..+..||++|++|++|+.+|++||++||||| | |+|+||+|+||.||.|||++ |+++|||||||+++.+++|
T Consensus 195 l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~~d~k~TLLhylv~~v~~~~p 274 (483)
T 2j1d_G 195 VKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYP 274 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCSSSCCCSCCCGGGGGGGGGSBCSSCTTCBHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccCCCCCceeeehHHHHhhhhcccCCCCCccHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999 4 59999999999999999995 9999999999999999999
Q ss_pred CccchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-Ccchhhhhhhhc
Q psy14168 213 QSTDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLIIKHDG-SATSVKVKTQGA 273 (276)
Q Consensus 213 ~ll~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 273 (276)
++++|.+||++|..|++|++++|.+++++|+++++.++++++....++. +.++|+.+|..|
T Consensus 275 ~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~~~d~f~~~m~~F 336 (483)
T 2j1d_G 275 SVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPGDKFVSVVSQF 336 (483)
T ss_dssp GGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHH
T ss_pred hhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876533 447899998876
No 4
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=4.5e-55 Score=415.81 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=223.8
Q ss_pred ccChhhhhHHhccCCCh-----------------hHHHHHHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCC
Q psy14168 5 VVNREGIEKLLSMLPTD-----------------EEKCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLD 67 (276)
Q Consensus 5 ~~~~~~iE~lf~~~~~~-----------------~~~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~ 67 (276)
.++...+|.+|+.++.. ++++.|+++||||++|+|++++ ++..++++||+.||..+|+
T Consensus 48 ~ld~~~~E~lF~~k~~~~~~~~~~~k~k~~~k~~~~v~lLd~kra~Ni~I~L~~l~-----~~~~ei~~aI~~~D~~~L~ 122 (402)
T 4eah_A 48 DLDLDRFEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKAG-----RSAEEICRAIHTFDLQTLP 122 (402)
T ss_dssp TTTHHHHHHHSCCCC--------------------CBCSSCHHHHHHHHHHHHHHC-----CCHHHHHHHHHTTSCSCCC
T ss_pred ccCHHHHHHHHhhcccCCccccchhcccccccCCCceeeCCHHHHHHHHHHHhcCC-----CCHHHHHHHHHcCCcccCC
Confidence 46788999999875310 1122367789999999999964 7888999999999999999
Q ss_pred hhhhhHHHHhccCCCHHHHHHHHHHHhC-CCCCCCChHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 68 YENLEREKLLSMLPTDEEKCKILEAVSA-NPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLEREVAEPLMDLKQ 146 (276)
Q Consensus 68 ~e~l~~~~Ll~~~Pt~eE~~~l~~~~~~-~~~~~L~~~E~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~~~~ 146 (276)
.+.| +.|++++||+||++.+++|.+. .|.+.|++||||+++|+.||+++.||+||.|+.+|++.+.++.+.+..+..
T Consensus 123 ~e~l--~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~v~~ 200 (402)
T 4eah_A 123 VDFV--ECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIA 200 (402)
T ss_dssp HHHH--HHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHhcCCCHHHHHHHHHhhccCCchhhccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999643 233689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHhhhhcCC---CcccceeccccccccccccCCCcchHHHHHHHHHHhhCCCccchhccccc
Q psy14168 147 GMDILRRNPTFKAILSTLLSIGIFLNG---TEVKGFQIEYLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQSTDLYSEIGP 223 (276)
Q Consensus 147 a~~~l~~S~~l~~lL~~vL~iGN~lNG---g~A~GFkL~sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~ll~~~~eL~~ 223 (276)
||++|++|++|+.+|++||++|||||| |+|+||+|+||.||.|||++|+++||||||++++.+++|++++|.+||++
T Consensus 201 A~~~l~~S~~l~~lL~~iL~~GN~mN~g~rg~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~~~~~~p~l~~f~~eL~~ 280 (402)
T 4eah_A 201 ASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYPELANFWQELHF 280 (402)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHCSSSCCCSCBCGGGGGSSSSSBCTTSSSBHHHHHHHHHHHHCGGGGTCSTTCCS
T ss_pred HHHHHHccHHHHHHHHHHHHHhhhccCCCCCccceeeHHHHHHHHhccCCCCCccHHHHHHHHHHhhhHHHHHHhhhhhh
Confidence 999999999999999999999999995 48999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 224 VTRASKVDFDELASSLRRMETECKASFDYLK 254 (276)
Q Consensus 224 v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~ 254 (276)
|..|++|++++|.+|+++|+++++.+++++.
T Consensus 281 v~~Aa~v~~~~l~~d~~~L~~~l~~~~~e~~ 311 (402)
T 4eah_A 281 VEKAAAVSLENVLLDVKELGRGMELIRRECS 311 (402)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998875
No 5
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=2.8e-53 Score=404.75 Aligned_cols=260 Identities=20% Similarity=0.270 Sum_probs=223.1
Q ss_pred ChhhhhHHhccCCChh----------HHHHHHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCChhh-hhHHH
Q psy14168 7 NREGIEKLLSMLPTDE----------EKCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYEN-LEREK 75 (276)
Q Consensus 7 ~~~~iE~lf~~~~~~~----------~~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~~e~-l~~~~ 75 (276)
+.+.+|.+|+..++.. +++.|+++||||++|+|++++ .++..++++||+.||..+|+.+. + +.
T Consensus 42 d~~~lE~lF~~~~~~~~~~~k~~~~~~v~lLd~kraqNi~I~L~~~~----~~~~~ei~~ai~~~D~~~L~~~~li--e~ 115 (411)
T 1ux5_A 42 VLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQFGINLHMYS----SLSVADLVKKILNCDRDFLQTPSVV--EF 115 (411)
T ss_dssp HHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHHHHHTGGGT----TSCHHHHHHHHHTTTHHHHTCHHHH--HH
T ss_pred hHHHHHHHhcccccccccccccCCCCeeeecChHHHHHHHHHHHhcC----CCCHHHHHHHHHhcChhhcCHHHHH--HH
Confidence 4577999999876432 112367789999999999973 37888999999999999998433 3 33
Q ss_pred ------------Hh-ccCCCHHHHHHHH---HHH--hCCCCCCCChHHHHHHHHh-cc-cchHHHHHHHHHHHHHHHHHH
Q psy14168 76 ------------LL-SMLPTDEEKCKIL---EAV--SANPGVPLGSAENFLLELS-NI-NELVARLKLWAFKLDYENLER 135 (276)
Q Consensus 76 ------------Ll-~~~Pt~eE~~~l~---~~~--~~~~~~~L~~~E~F~~~l~-~i-p~~~~Rl~~l~f~~~f~~~~~ 135 (276)
|+ +++|+++|.+.++ +|. .+++ +.|++||||+++++ .| |+++.||+||.|+.+|++.+.
T Consensus 116 L~~~~~~ei~~~L~~~~~P~~~e~e~l~~~~~~~~~~~d~-~~L~~~eqf~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~ 194 (411)
T 1ux5_A 116 LSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDP-NDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYN 194 (411)
T ss_dssp TTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCS-TTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHH
T ss_pred hchhHHHhhHHHHHHhcCCCchhHHHHHHHHHhhhccCCh-hhCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 44 6899988876332 221 2444 68999999999986 79 568999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcCCC--cccceeccccccccccccCCCcchHHHHHHHHHHhhCCC
Q psy14168 136 EVAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLNGT--EVKGFQIEYLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQ 213 (276)
Q Consensus 136 ~l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lNGg--~A~GFkL~sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~ 213 (276)
++.+.+..+..||++|++|++|+.+|++||++||||||| +|+||+|+||.||.|||++|+++||||||++++.+++|+
T Consensus 195 ~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~ 274 (411)
T 1ux5_A 195 ELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPS 274 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhCcccCCCCCeeEeehhHHHHHHHhhCCCCCccHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999965 999999999999999999999999999999999999999
Q ss_pred ccchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCcchhhhhhhhc
Q psy14168 214 STDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLIIKHD----GSATSVKVKTQGA 273 (276)
Q Consensus 214 ll~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~~~----~~~~~~~~~~~~~ 273 (276)
+++|.+||++|..|++|+++++.+++++|.++++.++++++.....+ .+.++|..+|..|
T Consensus 275 l~~f~~eL~~v~~Aakv~~~~l~~d~~~L~~~l~~v~~~l~~~~~s~~~~~~~~d~f~~~~~~f 338 (411)
T 1ux5_A 275 FNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPV 338 (411)
T ss_dssp GGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHH
T ss_pred cccccchhhhHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999998633211 2347888888765
No 6
>2b3g_B Cellular tumor antigen P53; OB-fold, ssDNA mimicry, replication; 1.60A {Homo sapiens}
Probab=51.45 E-value=5.8 Score=22.15 Aligned_cols=21 Identities=24% Similarity=0.416 Sum_probs=15.5
Q ss_pred CCCcccChhhhhHHhccCCCh
Q psy14168 1 MDSTVVNREGIEKLLSMLPTD 21 (276)
Q Consensus 1 ~~~~~~~~~~iE~lf~~~~~~ 21 (276)
||++-++.++||+-|+..|.+
T Consensus 8 ~ddlmlspddi~qw~s~dp~p 28 (28)
T 2b3g_B 8 MDDLMLSPDDIEQWFTEDPGP 28 (28)
T ss_dssp TGGGGCCHHHHHHHHHC----
T ss_pred HHhhhcChHHHHHHhhcCCCC
Confidence 688899999999999887643
No 7
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=32.31 E-value=65 Score=17.59 Aligned_cols=23 Identities=22% Similarity=0.257 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 232 FDELASSLRRMETECKASFDYLK 254 (276)
Q Consensus 232 l~~l~~d~~~L~~~l~~~~~~l~ 254 (276)
.+++-.++..|...+.++.+.+.
T Consensus 3 adelykeledlqerlrklrkklr 25 (27)
T 3twe_A 3 ADELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 46677788888888888777664
No 8
>3kpe_A Fusion glycoprotein F0; peptide-small-molecule complex, alpha helix, coiled-coil, EN protein, fusion protein; HET: TM3 PG4; 1.47A {Human respiratory syncytial virus} PDB: 1g2c_A
Probab=31.28 E-value=90 Score=20.31 Aligned_cols=42 Identities=12% Similarity=0.248 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcCC
Q psy14168 130 YENLEREVAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLNG 173 (276)
Q Consensus 130 f~~~~~~l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lNG 173 (276)
++..+..++..+....+|+.+|.+ ..+.+--.|-++-||.|.
T Consensus 2 le~~I~~Lk~ai~~TNeAV~~L~~--g~~~la~Av~~iQ~~IN~ 43 (51)
T 3kpe_A 2 LEGEVNKIKSALLSTNKAVVSLSN--GVSVLTSKVLDLKNYIDK 43 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 467788888999999999998854 566777788888898883
No 9
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=26.54 E-value=85 Score=17.12 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 234 ELASSLRRMETECKASFDYLKLI 256 (276)
Q Consensus 234 ~l~~d~~~L~~~l~~~~~~l~~~ 256 (276)
++..++.+|+...+.++++++..
T Consensus 4 qlkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 4 QLKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhHHHHHHHHHhcc
Confidence 46677888888888888877643
No 10
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=25.87 E-value=38 Score=19.72 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=15.9
Q ss_pred hHHHHHHHHhcccchHHHHHHH
Q psy14168 103 SAENFLLELSNINELVARLKLW 124 (276)
Q Consensus 103 ~~E~F~~~l~~ip~~~~Rl~~l 124 (276)
--|||+.-|-++..+++++.++
T Consensus 13 lkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 13 LKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3478888887887777776654
No 11
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=25.28 E-value=38 Score=31.28 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=34.2
Q ss_pred CCCcccChhhhhHHhccCCChhHHHHHHHh-hhcCCCcccccccchhhhc
Q psy14168 1 MDSTVVNREGIEKLLSMLPTDEEKCKILEA-VSANPGVPLGSAENFLLEL 49 (276)
Q Consensus 1 ~~~~~~~~~~iE~lf~~~~~~~~~~~i~~~-raqN~~I~L~~~k~~~l~l 49 (276)
||..+++.+.+|.|....|+++|...|..- +.++.---|+..-.+++.+
T Consensus 116 ~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l 165 (402)
T 4eah_A 116 FDLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLF 165 (402)
T ss_dssp TSCSCCCHHHHHHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHhcCCCHHHHHHHHHhhccCCchhhccHHHHHHHHH
Confidence 578899999999999999999999877653 3334333455444443333
No 12
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=24.61 E-value=24 Score=21.01 Aligned_cols=23 Identities=22% Similarity=0.271 Sum_probs=17.2
Q ss_pred HhcChhHHHHHHHHHHhhhhcCC
Q psy14168 151 LRRNPTFKAILSTLLSIGIFLNG 173 (276)
Q Consensus 151 l~~S~~l~~lL~~vL~iGN~lNG 173 (276)
+.+.+..+++-++++.||+-|||
T Consensus 3 ~~~Dp~~K~l~~cL~~IgDEld~ 25 (34)
T 3pk1_B 3 VPQDASTKKLSECLKRIGDELDS 25 (34)
T ss_dssp ----CTHHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHcc
Confidence 34677889999999999999985
No 13
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=23.01 E-value=82 Score=20.50 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=23.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14168 228 SKVDFDELASSLRRMETECKASFDYLKLIIK 258 (276)
Q Consensus 228 a~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~ 258 (276)
...+++.+..+..+|+..+..+..+++..++
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557788888888888888888887776554
Done!