Query psy14168
Match_columns 276
No_of_seqs 151 out of 892
Neff 7.0
Searched_HMMs 13730
Date Fri Aug 16 21:10:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14168.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14168hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v9da_ a.207.1.1 (A:) Diaphan 100.0 5E-55 3.7E-59 403.9 12.7 242 24-274 4-249 (332)
2 d1ux5a_ a.207.1.1 (A:) Bni1 {B 100.0 2.2E-51 1.6E-55 389.3 13.2 262 7-274 42-339 (411)
3 d2a6sa1 d.298.1.1 (A:1-83) Tox 21.9 28 0.0021 23.2 2.7 15 261-275 43-57 (83)
4 d1ynha1 d.126.1.7 (A:3-441) Su 19.6 51 0.0037 28.6 4.5 74 147-221 319-409 (439)
5 d1v9da_ a.207.1.1 (A:) Diaphan 19.1 26 0.0019 29.0 2.5 29 1-29 36-64 (332)
6 d1wa8b1 a.25.3.1 (B:602-695) E 17.7 1.2E+02 0.0091 19.5 5.7 28 229-256 4-31 (94)
7 d1ivsa1 a.2.7.3 (A:797-862) Va 15.5 69 0.005 19.7 3.4 25 235-259 2-26 (66)
8 d1ez3a_ a.47.2.1 (A:) Syntaxin 14.2 94 0.0068 21.3 4.3 27 126-152 4-30 (124)
9 d1gg2g_ a.137.3.1 (G:) Transdu 12.8 1.3E+02 0.0094 18.0 4.0 37 231-267 1-44 (54)
10 d1dj8a_ a.57.1.1 (A:) Protein 12.5 86 0.0063 20.5 3.2 29 246-275 47-75 (79)
No 1
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=5e-55 Score=403.88 Aligned_cols=242 Identities=20% Similarity=0.281 Sum_probs=208.9
Q ss_pred HHHHHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCChhhhhHHHHhccCCCHHHHHHHHHHHhCCCCCCCCh
Q psy14168 24 KCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLEREKLLSMLPTDEEKCKILEAVSANPGVPLGS 103 (276)
Q Consensus 24 ~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~~e~l~~~~Ll~~~Pt~eE~~~l~~~~~~~~~~~L~~ 103 (276)
+.-++++|+||++|+|++++ +++.++++||+.||..+|+.|.+ +.|++++||+||++.+++|. ++. +.|++
T Consensus 4 i~vLd~kr~~ni~I~L~~~k-----~~~~~i~~ai~~~D~~~l~~e~l--~~L~~~~Pt~eE~~~l~~~~-~~~-~~L~~ 74 (332)
T d1v9da_ 4 LKVLDSKTAQNLSIFLGSFR-----MPYQEIKNVILEVNEAVLTESMI--QNLIKQMPEPEQLKMLSELK-EEY-DDLAE 74 (332)
T ss_dssp CSSSCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHTCTTTCCHHHH--HHHHHHSCCHHHHHHHHTCG-GGG-GGSCH
T ss_pred eEeccHHHHHHHHHHHhhCC-----cCHHHHHHHHHhCCcccCCHHHH--HHHHHhCcCHHHHHHHHHhc-CCh-hhcCh
Confidence 34467899999999999975 78888999999999999999999 99999999999999999985 544 58999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcCC----Ccccce
Q psy14168 104 AENFLLELSNINELVARLKLWAFKLDYENLEREVAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLNG----TEVKGF 179 (276)
Q Consensus 104 ~E~F~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lNG----g~A~GF 179 (276)
||+|+++|++||+++.||+||.|+.+|++.++++.+.+..+..||+++++|++|+.+|++||++|||||| |+|+||
T Consensus 75 ~E~f~~~l~~ip~~~~Rl~~~~~~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~~L~~iL~~GN~mN~g~~~g~A~GF 154 (332)
T d1v9da_ 75 SEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGF 154 (332)
T ss_dssp HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC----------------------
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHhcchhcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 489999
Q ss_pred eccccccccccccCCCcchHHHHHHHHHHhhCCCccchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14168 180 QIEYLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQSTDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLIIKH 259 (276)
Q Consensus 180 kL~sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~ll~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~~ 259 (276)
+|+||.||.++|++|+++||||||++.+.+++|++++|.+||++|..|++++++++.+++++|++++..++.+++.....
T Consensus 155 kL~sL~kL~d~Ks~d~~~tLL~~iv~~~~~~~p~l~~~~~eL~~v~~ask~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~ 234 (332)
T d1v9da_ 155 NISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAA 234 (332)
T ss_dssp --CCHHHHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CHHHHHhHhhccCCCCCccHHHHHHHHHHHhCchhccchhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred CCCcchhhhhhhhcc
Q psy14168 260 DGSATSVKVKTQGAW 274 (276)
Q Consensus 260 ~~~~~~~~~~~~~~~ 274 (276)
..+.++|+.+|..|-
T Consensus 235 ~~~~d~f~~~~~~Fl 249 (332)
T d1v9da_ 235 TDEKDKFVEKMTSFV 249 (332)
T ss_dssp SSSSCCHHHHHHHHH
T ss_pred ccchhhHHHHHHHHH
Confidence 566689999998763
No 2
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.2e-51 Score=389.32 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=232.8
Q ss_pred ChhhhhHHhccCCChhH----------HHHHHHhhhcCCCcccccccchhhhccCHHHHHHHhhcCccCCChhhhhHHHH
Q psy14168 7 NREGIEKLLSMLPTDEE----------KCKILEAVSANPGVPLGSAENFLLELSNINELVARLKLWAFKLDYENLEREKL 76 (276)
Q Consensus 7 ~~~~iE~lf~~~~~~~~----------~~~i~~~raqN~~I~L~~~k~~~l~l~~~~~~~ail~~D~~~L~~e~l~~~~L 76 (276)
+...+|++|+.++.... .+.|+++|+||++|+|++++ .++..++++||..||..+|+.+.+ ..+
T Consensus 42 ~~~~le~~F~~k~~~~~~~~~~~~~~~~~lLd~kr~qni~I~L~~~~----~~s~~~i~~ai~~~d~~~l~~~~l--~~l 115 (411)
T d1ux5a_ 42 VLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQFGINLHMYS----SLSVADLVKKILNCDRDFLQTPSV--VEF 115 (411)
T ss_dssp HHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHHHHHTGGGT----TSCHHHHHHHHHTTTHHHHTCHHH--HHH
T ss_pred hHHHHHHHhccCCCCCCcccccccccccccCcHHHHHHHHHHHHHcc----CCCHHHHHHHHHhcChhhcCHHHH--HHH
Confidence 34579999998765431 12356789999999999974 378889999999999999988887 665
Q ss_pred h--------------ccCCCHHHHHHHHHHHhCC----CCCCCChHHHHHHHHh--cccchHHHHHHHHHHHHHHHHHHH
Q psy14168 77 L--------------SMLPTDEEKCKILEAVSAN----PGVPLGSAENFLLELS--NINELVARLKLWAFKLDYENLERE 136 (276)
Q Consensus 77 l--------------~~~Pt~eE~~~l~~~~~~~----~~~~L~~~E~F~~~l~--~ip~~~~Rl~~l~f~~~f~~~~~~ 136 (276)
+ +++||++|.+.+++|.... +.+.|++||+|+++|+ .||++..||+||.|+.+|++.+++
T Consensus 116 l~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d~~~L~~~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~ 195 (411)
T d1ux5a_ 116 LSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNE 195 (411)
T ss_dssp TTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHH
T ss_pred HhhcchhhhHHHHHHHhCCCcHHHHHHHHHHhhccccCChhhcCHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 5 7999999999999996421 2258999999999987 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHhhhhcCCC--cccceeccccccccccccCCCcchHHHHHHHHHHhhCCCc
Q psy14168 137 VAEPLMDLKQGMDILRRNPTFKAILSTLLSIGIFLNGT--EVKGFQIEYLTKVPEVKDTVHKHSLLHHLCDLVLHQFPQS 214 (276)
Q Consensus 137 l~~~l~~~~~a~~~l~~S~~l~~lL~~vL~iGN~lNGg--~A~GFkL~sL~KL~d~Ks~d~k~tLLhylv~~~~~~~p~l 214 (276)
+.+.+..+..||++|++|++|+.+|++||++||||||| +|+||+|+||.||.++||+|+++||||||++.+.+++|++
T Consensus 196 l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~~~A~GFkL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l 275 (411)
T d1ux5a_ 196 LLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSF 275 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhhhhcCCCCCcceeehHHHHHhhhccCCCCCeeHHHHHHHHHHHhCcHh
Confidence 99999999999999999999999999999999999954 8999999999999999999999999999999999999999
Q ss_pred cchhccccchHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----Ccchhhhhhhhcc
Q psy14168 215 TDLYSEIGPVTRASKVDFDELASSLRRMETECKASFDYLKLIIKHDG----SATSVKVKTQGAW 274 (276)
Q Consensus 215 l~~~~eL~~v~~Aa~v~l~~l~~d~~~L~~~l~~~~~~l~~~~~~~~----~~~~~~~~~~~~~ 274 (276)
+.|.+||++|..|++++++++.+++++|++++..++++++...+... +.++|+.+|+.|-
T Consensus 276 ~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~~~~~~~~~d~f~~~~~~fl 339 (411)
T d1ux5a_ 276 NDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPVL 339 (411)
T ss_dssp GGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999988665543 3468888888763
No 3
>d2a6sa1 d.298.1.1 (A:1-83) Toxin YoeB {Escherichia coli [TaxId: 562]}
Probab=21.89 E-value=28 Score=23.19 Aligned_cols=15 Identities=33% Similarity=0.683 Sum_probs=13.0
Q ss_pred CCcchhhhhhhhccc
Q psy14168 261 GSATSVKVKTQGAWS 275 (276)
Q Consensus 261 ~~~~~~~~~~~~~~~ 275 (276)
+.+.++|-.+.|+||
T Consensus 43 gkpE~Lkg~l~g~wS 57 (83)
T d2a6sa1 43 GKPEPLKHNLSGFWS 57 (83)
T ss_dssp TCCEECCGGGTTCEE
T ss_pred CCCccccCCCCCEEE
Confidence 455799999999998
No 4
>d1ynha1 d.126.1.7 (A:3-441) Succinylarginine dihydrolase {Escherichia coli [TaxId: 562]}
Probab=19.55 E-value=51 Score=28.58 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=52.2
Q ss_pred HHHHHhcChhHHHHHHHHHHhhh-------------hcCCCcccceeccccccccccccCCCc----chHHHHHHHHHHh
Q psy14168 147 GMDILRRNPTFKAILSTLLSIGI-------------FLNGTEVKGFQIEYLTKVPEVKDTVHK----HSLLHHLCDLVLH 209 (276)
Q Consensus 147 a~~~l~~S~~l~~lL~~vL~iGN-------------~lNGg~A~GFkL~sL~KL~d~Ks~d~k----~tLLhylv~~~~~ 209 (276)
+..++++++..+..|.-+++-+| .+||||-.=.+|.-...=.+..+.+.+ ..++.-|..++.+
T Consensus 319 ~P~Ec~~~~~v~~~l~~l~~~~~PI~~v~~~DlrQSM~NGGGPACLRLRVvLn~~E~~avn~~~lm~~~l~~~L~~wV~~ 398 (439)
T d1ynha1 319 LPQECREHAGVWGYLNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDR 398 (439)
T ss_dssp EETHHHHSHHHHHHHHHHHHSSSSEEEEEEECCHHHHTTTCCTTTTEEEEEECHHHHHTSCGGGBCSHHHHHHHHHHHHH
T ss_pred cChHHhcChHHHHHHHHHHhcCCCcceEEEecHHHHhhcCCCchhheeeeecCHHHHhhcCCceecCHHHHHHHHHHHHH
Confidence 34456677777777777777554 467765555666666655667777654 5799999999999
Q ss_pred hCCCccchhccc
Q psy14168 210 QFPQSTDLYSEI 221 (276)
Q Consensus 210 ~~p~ll~~~~eL 221 (276)
+|+|-+. .+||
T Consensus 399 hYRD~L~-~~DL 409 (439)
T d1ynha1 399 YYRDRLT-AADL 409 (439)
T ss_dssp HCCSCBC-GGGG
T ss_pred hccccCC-hhhc
Confidence 9998765 3344
No 5
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.13 E-value=26 Score=29.03 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=25.6
Q ss_pred CCCcccChhhhhHHhccCCChhHHHHHHH
Q psy14168 1 MDSTVVNREGIEKLLSMLPTDEEKCKILE 29 (276)
Q Consensus 1 ~~~~~~~~~~iE~lf~~~~~~~~~~~i~~ 29 (276)
||..+++.+.++.|....||++|..++..
T Consensus 36 ~D~~~l~~e~l~~L~~~~Pt~eE~~~l~~ 64 (332)
T d1v9da_ 36 VNEAVLTESMIQNLIKQMPEPEQLKMLSE 64 (332)
T ss_dssp TCTTTCCHHHHHHHHHHSCCHHHHHHHHT
T ss_pred CCcccCCHHHHHHHHHhCcCHHHHHHHHH
Confidence 57889999999999999999999987743
No 6
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=17.73 E-value=1.2e+02 Score=19.50 Aligned_cols=28 Identities=7% Similarity=0.133 Sum_probs=14.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14168 229 KVDFDELASSLRRMETECKASFDYLKLI 256 (276)
Q Consensus 229 ~v~l~~l~~d~~~L~~~l~~~~~~l~~~ 256 (276)
++++..|..-...+......++..|..+
T Consensus 4 ~~d~~~l~~~a~~i~~~~~~i~~~l~~L 31 (94)
T d1wa8b1 4 QWNFAGIEAAASAIQGNVTSIHSLLDEG 31 (94)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555554443
No 7
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=15.47 E-value=69 Score=19.74 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14168 235 LASSLRRMETECKASFDYLKLIIKH 259 (276)
Q Consensus 235 l~~d~~~L~~~l~~~~~~l~~~~~~ 259 (276)
+..++..|.+.+..++.++..+.+.
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~k 26 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRK 26 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666554443
No 8
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.23 E-value=94 Score=21.32 Aligned_cols=27 Identities=7% Similarity=0.196 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14168 126 FKLDYENLEREVAEPLMDLKQGMDILR 152 (276)
Q Consensus 126 f~~~f~~~~~~l~~~l~~~~~a~~~l~ 152 (276)
|+..|-..++.++..|..+...+..|.
T Consensus 4 ~m~~Ff~eV~~Ir~~I~~i~~~v~~i~ 30 (124)
T d1ez3a_ 4 FMDEFFEQVEEIRGFIDKIAENVEEVK 30 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999998885
No 9
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.80 E-value=1.3e+02 Score=18.02 Aligned_cols=37 Identities=5% Similarity=0.064 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHHH-------HHHHHHHHHHHhcCCCcchhh
Q psy14168 231 DFDELASSLRRMETEC-------KASFDYLKLIIKHDGSATSVK 267 (276)
Q Consensus 231 ~l~~l~~d~~~L~~~l-------~~~~~~l~~~~~~~~~~~~~~ 267 (276)
++.++...+..|+..+ ..+-.+|..++.+-.+.|+|-
T Consensus 1 ~i~q~rk~VeqLr~e~~~~RikvS~aa~~l~~y~e~~~~~Dpll 44 (54)
T d1gg2g_ 1 SIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLL 44 (54)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHGGGCTTT
T ss_pred CHHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhcCcCCCCc
Confidence 3566667777777665 455556666666656666653
No 10
>d1dj8a_ a.57.1.1 (A:) Protein HNS-dependent expression A; HdeA {Escherichia coli [TaxId: 562]}
Probab=12.46 E-value=86 Score=20.53 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCCCcchhhhhhhhccc
Q psy14168 246 CKASFDYLKLIIKHDGSATSVKVKTQGAWS 275 (276)
Q Consensus 246 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 275 (276)
+..+.-.+-..++.... .+|.+|++|-|.
T Consensus 47 iekvtP~vv~~Ck~~pk-~s~~~kv~~~~~ 75 (79)
T d1dj8a_ 47 IATVTPAIVQACTQDKQ-ANFKDKVKGEWD 75 (79)
T ss_dssp HHHHHHHHHHHHHTTTT-SBHHHHHHHHHT
T ss_pred hhhccHHHHHHHHhCcH-HHHHHHHHHHHH
Confidence 34555666666777544 899999999985
Done!