RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14194
         (87 letters)



>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey
           (Saimiri boliviensis) [TaxId: 27679]}
          Length = 115

 Score = 22.7 bits (48), Expect = 6.6
 Identities = 7/35 (20%), Positives = 12/35 (34%)

Query: 38  GVMLRLVEDLVTHMIPSSYSFGSARPIATHLAPNS 72
            +     E+     +   Y FG A      + PN+
Sbjct: 67  ALEKMQREEQCILHLGPRYGFGEAGKPKFGIEPNA 101


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0686    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 314,942
Number of extensions: 12013
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 3
Length of query: 87
Length of database: 2,407,596
Length adjustment: 52
Effective length of query: 35
Effective length of database: 1,693,636
Effective search space: 59277260
Effective search space used: 59277260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.0 bits)