BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14196
(79 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|443687679|gb|ELT90579.1| hypothetical protein CAPTEDRAFT_221674 [Capitella teleta]
Length = 135
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 52/53 (98%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCETT+G+++RGKLVEAEDNMNC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETTSGEVYRGKLVEAEDNMNCQMANITVTYRDG 53
>gi|291235317|ref|XP_002737590.1| PREDICTED: small nuclear ribonucleoprotein polypeptide D3-like
[Saccoglossus kowalevskii]
Length = 123
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 52/53 (98%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET++G+++RGKL+EAEDNMNC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETSSGEVYRGKLIEAEDNMNCQMANITVTYRDG 53
>gi|241690470|ref|XP_002411764.1| small nuclear ribonucleoprotein Sm D3, putative [Ixodes
scapularis]
gi|215504603|gb|EEC14097.1| small nuclear ribonucleoprotein Sm D3, putative [Ixodes
scapularis]
Length = 122
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKLVEAEDNMNC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG 53
>gi|405976315|gb|EKC40827.1| Small nuclear ribonucleoprotein Sm D3 [Crassostrea gigas]
Length = 131
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCETT G+++RGKLVEAEDNMNC M+ +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETTTGEVYRGKLVEAEDNMNCQMSAITVTYRDG 53
>gi|346472269|gb|AEO35979.1| hypothetical protein [Amblyomma maculatum]
Length = 122
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCET G+++RGKLVEAEDNMNC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG 53
>gi|115497280|ref|NP_001069947.1| small nuclear ribonucleoprotein Sm D3 [Bos taurus]
gi|86437979|gb|AAI12525.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Bos taurus]
Length = 125
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 51/57 (89%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG L
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGLAQL 57
>gi|308321147|gb|ADO27727.1| small nuclear ribonucleoprotein sm d3 [Ictalurus furcatus]
Length = 128
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|41054297|ref|NP_956054.1| small nuclear ribonucleoprotein D3 polypeptide, like [Danio
rerio]
gi|28278495|gb|AAH45929.1| Small nuclear ribonucleoprotein D3 polypeptide, like [Danio
rerio]
gi|182889668|gb|AAI65492.1| Snrpd3l protein [Danio rerio]
Length = 128
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVSQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|432888006|ref|XP_004075020.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like, partial
[Oryzias latipes]
Length = 117
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|47211785|emb|CAF93753.1| unnamed protein product [Tetraodon nigroviridis]
Length = 127
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|348513729|ref|XP_003444394.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Oreochromis niloticus]
Length = 127
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|4759160|ref|NP_004166.1| small nuclear ribonucleoprotein Sm D3 [Homo sapiens]
gi|13385598|ref|NP_080371.1| small nuclear ribonucleoprotein Sm D3 [Mus musculus]
gi|56119060|ref|NP_001007839.1| small nuclear ribonucleoprotein Sm D3 [Gallus gallus]
gi|62859245|ref|NP_001017093.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Xenopus
(Silurana) tropicalis]
gi|148230601|ref|NP_001084936.1| small nuclear ribonucleoprotein Sm D3 [Xenopus laevis]
gi|302563765|ref|NP_001180981.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|343478171|ref|NP_001230355.1| small nuclear ribonucleoprotein Sm D3 [Sus scrofa]
gi|73995845|ref|XP_849660.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Canis lupus
familiaris]
gi|109093572|ref|XP_001096170.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 1
[Macaca mulatta]
gi|109509970|ref|XP_001079870.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
gi|126344584|ref|XP_001362481.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Monodelphis domestica]
gi|149632566|ref|XP_001509901.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Ornithorhynchus anatinus]
gi|149720126|ref|XP_001489110.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Equus
caballus]
gi|291412675|ref|XP_002722599.1| PREDICTED: small nuclear ribonucleoprotein polypeptide D3
[Oryctolagus cuniculus]
gi|296191500|ref|XP_002743645.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Callithrix
jacchus]
gi|297708452|ref|XP_002830980.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 1 [Pongo
abelii]
gi|301779389|ref|XP_002925102.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Ailuropoda
melanoleuca]
gi|332263674|ref|XP_003280877.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Nomascus
leucogenys]
gi|344294995|ref|XP_003419200.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Loxodonta
africana]
gi|348584590|ref|XP_003478055.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cavia
porcellus]
gi|392355294|ref|XP_003751996.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
gi|395753126|ref|XP_003779546.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 2 [Pongo
abelii]
gi|395753128|ref|XP_003779547.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 3 [Pongo
abelii]
gi|395861839|ref|XP_003803182.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Otolemur
garnettii]
gi|397469575|ref|XP_003806425.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Pan paniscus]
gi|410055702|ref|XP_003953897.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 1 [Pan
troglodytes]
gi|410055704|ref|XP_003953898.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 2 [Pan
troglodytes]
gi|410976969|ref|XP_003994885.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Felis catus]
gi|426247570|ref|XP_004017554.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Ovis aries]
gi|426393867|ref|XP_004063231.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Gorilla gorilla
gorilla]
gi|51338667|sp|P62318.1|SMD3_HUMAN RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|54039609|sp|P62323.1|SMD3_XENLA RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|61246343|sp|P62320.1|SMD3_MOUSE RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|315583600|pdb|3PGW|Z Chain Z, Crystal Structure Of Human U1 Snrnp
gi|315583609|pdb|3PGW|W Chain W, Crystal Structure Of Human U1 Snrnp
gi|332639436|pdb|2Y9A|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639443|pdb|2Y9A|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639450|pdb|2Y9A|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639460|pdb|2Y9B|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639467|pdb|2Y9B|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639474|pdb|2Y9B|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639484|pdb|2Y9C|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639491|pdb|2Y9C|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639498|pdb|2Y9C|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639508|pdb|2Y9D|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639515|pdb|2Y9D|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639522|pdb|2Y9D|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|600750|gb|AAA57034.1| Sm D3 [Homo sapiens]
gi|12653375|gb|AAH00457.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo
sapiens]
gi|12837822|dbj|BAB23963.1| unnamed protein product [Mus musculus]
gi|12839911|dbj|BAB24705.1| unnamed protein product [Mus musculus]
gi|12859667|dbj|BAB31729.1| unnamed protein product [Mus musculus]
gi|13111955|gb|AAH03150.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo
sapiens]
gi|47122949|gb|AAH70616.1| MGC81359 protein [Xenopus laevis]
gi|47678697|emb|CAG30469.1| SNRPD3 [Homo sapiens]
gi|53130412|emb|CAG31535.1| hypothetical protein RCJMB04_7j2 [Gallus gallus]
gi|74227850|dbj|BAE35738.1| unnamed protein product [Mus musculus]
gi|89266931|emb|CAJ81806.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Xenopus
(Silurana) tropicalis]
gi|90085617|dbj|BAE91549.1| unnamed protein product [Macaca fascicularis]
gi|109451504|emb|CAK54613.1| SNRPD3 [synthetic construct]
gi|109452100|emb|CAK54912.1| SNRPD3 [synthetic construct]
gi|119580074|gb|EAW59670.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo
sapiens]
gi|148699966|gb|EDL31913.1| small nuclear ribonucleoprotein D3, isoform CRA_b [Mus musculus]
gi|149043764|gb|EDL97215.1| rCG60635, isoform CRA_b [Rattus norvegicus]
gi|170285144|gb|AAI61305.1| hypothetical protein LOC549847 [Xenopus (Silurana) tropicalis]
gi|197129341|gb|ACH45839.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197129342|gb|ACH45840.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197129343|gb|ACH45841.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197692199|dbj|BAG70063.1| small nuclear ribonucleoprotein polypeptide D3 [Homo sapiens]
gi|197692447|dbj|BAG70187.1| small nuclear ribonucleoprotein polypeptide D3 [Homo sapiens]
gi|208965532|dbj|BAG72780.1| small nuclear ribonucleoprotein D3 polypeptide [synthetic
construct]
gi|296478296|tpg|DAA20411.1| TPA: small nuclear ribonucleoprotein D3 polypeptide 18kDa [Bos
taurus]
gi|355563528|gb|EHH20090.1| hypothetical protein EGK_02876 [Macaca mulatta]
gi|355784846|gb|EHH65697.1| hypothetical protein EGM_02515 [Macaca fascicularis]
gi|380815844|gb|AFE79796.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815846|gb|AFE79797.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815848|gb|AFE79798.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815850|gb|AFE79799.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815852|gb|AFE79800.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|383420997|gb|AFH33712.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|384940658|gb|AFI33934.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|387018114|gb|AFJ51175.1| Small nuclear ribonucleoprotein D3 polypeptide [Crotalus
adamanteus]
gi|410211528|gb|JAA02983.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410264204|gb|JAA20068.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410264206|gb|JAA20069.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410302836|gb|JAA30018.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|417395981|gb|JAA45024.1| Putative small nuclear ribonucleoprotein sm d3 [Desmodus
rotundus]
gi|432095017|gb|ELK26406.1| Small nuclear ribonucleoprotein Sm D3 [Myotis davidii]
gi|449281570|gb|EMC88617.1| Small nuclear ribonucleoprotein Sm D3 [Columba livia]
Length = 126
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|15079335|gb|AAH11510.1| Small nuclear ribonucleoprotein D3 [Mus musculus]
Length = 126
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|410932149|ref|XP_003979456.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like, partial
[Takifugu rubripes]
gi|281343886|gb|EFB19470.1| hypothetical protein PANDA_014546 [Ailuropoda melanoleuca]
Length = 106
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|225734040|pdb|3CW1|D Chain D, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734049|pdb|3CW1|S Chain S, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734058|pdb|3CW1|T Chain T, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734067|pdb|3CW1|U Chain U, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 126
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|307192020|gb|EFN75404.1| Small nuclear ribonucleoprotein Sm D3 [Harpegnathos saltator]
Length = 143
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|440901202|gb|ELR52187.1| Small nuclear ribonucleoprotein Sm D3, partial [Bos grunniens
mutus]
Length = 107
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|156550773|ref|XP_001605596.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Nasonia
vitripennis]
Length = 142
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|148227688|ref|NP_001079359.1| uncharacterized protein LOC379046 [Xenopus laevis]
gi|27371312|gb|AAH40973.1| MGC52856 protein [Xenopus laevis]
gi|133736997|gb|AAI33764.1| MGC52856 protein [Xenopus laevis]
Length = 126
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|307192021|gb|EFN75405.1| Small nuclear ribonucleoprotein Sm D3 [Harpegnathos saltator]
Length = 142
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|444708595|gb|ELW49650.1| Small nuclear ribonucleoprotein Sm D3 [Tupaia chinensis]
Length = 112
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|332028955|gb|EGI68973.1| Small nuclear ribonucleoprotein Sm D3 [Acromyrmex echinatior]
Length = 142
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|321456914|gb|EFX68011.1| hypothetical protein DAPPUDRAFT_63450 [Daphnia pulex]
Length = 118
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKLVEAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEIYRGKLVEAEDNMNCQMTNITVTYRDG 53
>gi|307185014|gb|EFN71243.1| Small nuclear ribonucleoprotein Sm D3 [Camponotus floridanus]
Length = 142
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|260837085|ref|XP_002613536.1| hypothetical protein BRAFLDRAFT_114009 [Branchiostoma floridae]
gi|229298921|gb|EEN69545.1| hypothetical protein BRAFLDRAFT_114009 [Branchiostoma floridae]
Length = 120
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+T ETT G+++RGKLVEAEDNMNC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTLETTTGEVYRGKLVEAEDNMNCQMANITVTYRDG 53
>gi|332028142|gb|EGI68193.1| Small nuclear ribonucleoprotein Sm D3 [Acromyrmex echinatior]
Length = 141
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|225706764|gb|ACO09228.1| Small nuclear ribonucleoprotein Sm D3 [Osmerus mordax]
gi|225707146|gb|ACO09419.1| Small nuclear ribonucleoprotein Sm D3 [Osmerus mordax]
Length = 127
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC MA++TVT RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|225716266|gb|ACO13979.1| Small nuclear ribonucleoprotein Sm D3 [Esox lucius]
Length = 127
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC MA++TVT RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|395753131|ref|XP_003779548.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 4 [Pongo
abelii]
Length = 120
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|351701822|gb|EHB04741.1| Small nuclear ribonucleoprotein Sm D3, partial [Heterocephalus
glaber]
Length = 136
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|50344816|ref|NP_001002081.1| small nuclear ribonucleoprotein Sm D3 [Danio rerio]
gi|47938090|gb|AAH71554.1| Small nuclear ribonucleoprotein D3 polypeptide [Danio rerio]
Length = 127
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDN+NC MA++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNVNCQMANITVTYRDG 53
>gi|427786245|gb|JAA58574.1| Putative small nuclear ribonucleoprotein sm d3 [Rhipicephalus
pulchellus]
Length = 122
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKLVEAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMCNITVTYRDG 53
>gi|209732980|gb|ACI67359.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 127
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC MA++TVT RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG 53
>gi|194382308|dbj|BAG58909.1| unnamed protein product [Homo sapiens]
Length = 120
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|383853962|ref|XP_003702491.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Megachile
rotundata]
Length = 142
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|238231831|ref|NP_001154102.1| Small nuclear ribonucleoprotein Sm D3 [Oncorhynchus mykiss]
gi|209734524|gb|ACI68131.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
gi|225704048|gb|ACO07870.1| Small nuclear ribonucleoprotein Sm D3 [Oncorhynchus mykiss]
Length = 128
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT RDG
Sbjct: 1 MSIGVPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDGRVAQLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|354492024|ref|XP_003508152.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cricetulus
griseus]
Length = 126
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|91084331|ref|XP_972583.1| PREDICTED: similar to AGAP012380-PA [Tribolium castaneum]
Length = 137
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|391342640|ref|XP_003745624.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Metaseiulus occidentalis]
Length = 138
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 49/54 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
MSIG+PIK+LHEAEGHIITCET G+++RGKLVEAEDNMNC M +TVT+RDG+
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLVEAEDNMNCHMQGITVTYRDGS 54
>gi|149043763|gb|EDL97214.1| rCG60635, isoform CRA_a [Rattus norvegicus]
Length = 84
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|195455442|ref|XP_002074722.1| GK23009 [Drosophila willistoni]
gi|194170807|gb|EDW85708.1| GK23009 [Drosophila willistoni]
Length = 150
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|195384527|ref|XP_002050966.1| GJ19907 [Drosophila virilis]
gi|194145763|gb|EDW62159.1| GJ19907 [Drosophila virilis]
Length = 151
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|195030021|ref|XP_001987867.1| GH19718 [Drosophila grimshawi]
gi|195120652|ref|XP_002004838.1| GI20137 [Drosophila mojavensis]
gi|193903867|gb|EDW02734.1| GH19718 [Drosophila grimshawi]
gi|193909906|gb|EDW08773.1| GI20137 [Drosophila mojavensis]
Length = 151
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|195148972|ref|XP_002015436.1| GL11081 [Drosophila persimilis]
gi|198455755|ref|XP_002138132.1| GA24604 [Drosophila pseudoobscura pseudoobscura]
gi|194109283|gb|EDW31326.1| GL11081 [Drosophila persimilis]
gi|198135383|gb|EDY68690.1| GA24604 [Drosophila pseudoobscura pseudoobscura]
Length = 150
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|6730225|pdb|1D3B|A Chain A, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730227|pdb|1D3B|C Chain C, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730229|pdb|1D3B|E Chain E, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730231|pdb|1D3B|G Chain G, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730233|pdb|1D3B|I Chain I, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730235|pdb|1D3B|K Chain K, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
Length = 75
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|225714524|gb|ACO13108.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
gi|290462385|gb|ADD24240.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
gi|290563060|gb|ADD38924.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
Length = 138
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET NG+++RG+L+EAEDNMNC M+ V+VT RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETINGEVYRGRLIEAEDNMNCQMSSVSVTHRDG 53
>gi|24652901|ref|NP_725106.1| small ribonucleoprotein particle protein SmD3 [Drosophila
melanogaster]
gi|194883784|ref|XP_001975977.1| GG20251 [Drosophila erecta]
gi|195333626|ref|XP_002033491.1| GM21338 [Drosophila sechellia]
gi|195485512|ref|XP_002091120.1| GE12410 [Drosophila yakuba]
gi|195551839|ref|XP_002076307.1| GD15400 [Drosophila simulans]
gi|13124554|sp|O44437.1|SMD3_DROME RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|2708715|gb|AAB92621.1| small nuclear ribonucleoprotein Sm D3 [Drosophila melanogaster]
gi|7303511|gb|AAF58566.1| small ribonucleoprotein particle protein SmD3 [Drosophila
melanogaster]
gi|21064481|gb|AAM29470.1| RE39820p [Drosophila melanogaster]
gi|190659164|gb|EDV56377.1| GG20251 [Drosophila erecta]
gi|194125461|gb|EDW47504.1| GM21338 [Drosophila sechellia]
gi|194177221|gb|EDW90832.1| GE12410 [Drosophila yakuba]
gi|194201956|gb|EDX15532.1| GD15400 [Drosophila simulans]
gi|220948494|gb|ACL86790.1| SmD3-PA [synthetic construct]
gi|220957770|gb|ACL91428.1| SmD3-PA [synthetic construct]
Length = 151
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|270008821|gb|EFA05269.1| hypothetical protein TcasGA2_TC015424 [Tribolium castaneum]
Length = 152
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|170038404|ref|XP_001847040.1| small nuclear ribonucleoprotein SM D3 [Culex quinquefasciatus]
gi|167882083|gb|EDS45466.1| small nuclear ribonucleoprotein SM D3 [Culex quinquefasciatus]
Length = 155
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M +TVTFRDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQLTVTFRDG 53
>gi|340729743|ref|XP_003403155.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Bombus
terrestris]
gi|350411432|ref|XP_003489349.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Bombus
impatiens]
Length = 142
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH ITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|194753313|ref|XP_001958958.1| GF12297 [Drosophila ananassae]
gi|190620256|gb|EDV35780.1| GF12297 [Drosophila ananassae]
Length = 151
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHIITCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|209730588|gb|ACI66163.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 119
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT RDG
Sbjct: 1 MSIGVPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDG 53
>gi|110758613|ref|XP_001120143.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Apis mellifera]
gi|380017261|ref|XP_003692578.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 1
[Apis florea]
gi|380017263|ref|XP_003692579.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 2
[Apis florea]
Length = 142
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH ITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 53
>gi|148699965|gb|EDL31912.1| small nuclear ribonucleoprotein D3, isoform CRA_a [Mus musculus]
Length = 84
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG 53
>gi|322787518|gb|EFZ13606.1| hypothetical protein SINV_14465 [Solenopsis invicta]
Length = 115
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH ITCET G+++RGKL+EAEDNMNC M ++TVT+RDG
Sbjct: 11 MSIGVPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG 63
>gi|209731578|gb|ACI66658.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 127
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M IG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC MA++TVT RDG
Sbjct: 1 MPIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG 53
>gi|240848533|ref|NP_001155808.1| small nuclear ribonucleoprotein Sm D3 [Acyrthosiphon pisum]
gi|239789870|dbj|BAH71532.1| ACYPI009639 [Acyrthosiphon pisum]
Length = 139
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 50/53 (94%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET +G+++RGKL+EAEDNMNC ++ VTVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETIDGEVYRGKLIEAEDNMNCQVSHVTVTYRDG 53
>gi|58393584|ref|XP_320178.2| AGAP012380-PA [Anopheles gambiae str. PEST]
gi|55234277|gb|EAA00211.2| AGAP012380-PA [Anopheles gambiae str. PEST]
Length = 143
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG 53
>gi|357631535|gb|EHJ79005.1| hypothetical protein KGM_15381 [Danaus plexippus]
Length = 130
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCET G+++RGKL+EAEDNMNC M VTVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDG 53
>gi|389610295|dbj|BAM18759.1| small ribonucleoprotein particle protein SmD3 [Papilio xuthus]
Length = 130
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCET G+++RGKL+EAEDNMNC M VTVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCETITGEVYRGKLIEAEDNMNCQMTLVTVTYRDG 53
>gi|157129367|ref|XP_001661657.1| small nuclear ribonucleoprotein sm d3 [Aedes aegypti]
gi|108872253|gb|EAT36478.1| AAEL011433-PA [Aedes aegypti]
Length = 147
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M +TVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQLTVTYRDG 53
>gi|156402297|ref|XP_001639527.1| predicted protein [Nematostella vectensis]
gi|156226656|gb|EDO47464.1| predicted protein [Nematostella vectensis]
Length = 110
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 49/53 (92%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH+IT ET NG+++RGKL+EAEDNMNC M+++TVT RDG
Sbjct: 1 MSIGVPIKILHEAEGHVITLETLNGEVYRGKLIEAEDNMNCQMSNITVTARDG 53
>gi|198436795|ref|XP_002126080.1| PREDICTED: similar to Small nuclear ribonucleoprotein Sm D3
(Sm-D3) (snRNP core protein D3) [Ciona intestinalis]
Length = 130
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGH++TCE+ G+++RGKL+EAEDNMN M DVTVT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHVVTCESATGEVYRGKLIEAEDNMNSQMQDVTVTYRDG 53
>gi|332376959|gb|AEE63619.1| unknown [Dendroctonus ponderosae]
Length = 138
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LH+AEGHI+TCET G+++RGKL+EAEDNMNC + +TVT+RDG
Sbjct: 1 MSIGVPIKVLHDAEGHIVTCETITGEVYRGKLIEAEDNMNCQLTQITVTYRDG 53
>gi|339251460|ref|XP_003372752.1| putative LSM domain protein [Trichinella spiralis]
gi|316968894|gb|EFV53095.1| putative LSM domain protein [Trichinella spiralis]
Length = 133
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K+LHEAEGHI+ ETT G++FRGKL+EAEDNMNC M DVTVT+RDG
Sbjct: 1 MSLGVPLKILHEAEGHIVMLETTTGEVFRGKLLEAEDNMNCNMTDVTVTYRDG 53
>gi|339251454|ref|XP_003372749.1| putative LSM domain protein [Trichinella spiralis]
gi|316968905|gb|EFV53105.1| putative LSM domain protein [Trichinella spiralis]
Length = 133
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K+LHEAEGHI+ ETT G++FRGKL+EAEDNMNC M DVTVT+RDG
Sbjct: 1 MSLGVPLKILHEAEGHIVMLETTTGEVFRGKLLEAEDNMNCNMTDVTVTYRDG 53
>gi|294653209|gb|ADF28512.1| small nuclear robonucleoprotein SMD3 [Pelinobius muticus]
Length = 122
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 48/53 (90%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K+ HEAEGH++T ET G+++RG+LVEAEDNMNC MADVTVT+RDG
Sbjct: 1 MSLGVPVKVFHEAEGHVVTLETNTGEIYRGRLVEAEDNMNCQMADVTVTYRDG 53
>gi|242013355|ref|XP_002427375.1| Small nuclear ribonucleoprotein SM D3, putative [Pediculus
humanus corporis]
gi|212511744|gb|EEB14637.1| Small nuclear ribonucleoprotein SM D3, putative [Pediculus
humanus corporis]
Length = 136
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+TCET G+++RGKL+EAEDNMNC M +VT+RDG
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMVTCSVTYRDG 53
>gi|196006814|ref|XP_002113273.1| hypothetical protein TRIADDRAFT_8416 [Trichoplax adhaerens]
gi|190583677|gb|EDV23747.1| hypothetical protein TRIADDRAFT_8416, partial [Trichoplax
adhaerens]
Length = 101
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG-TYYLPA 59
MSIGIP+K+LHEAEGH+IT ET +G+++RGKL EAEDNMNC M V VT+RDG T YL
Sbjct: 1 MSIGIPVKILHEAEGHVITLETVSGEVYRGKLSEAEDNMNCQMYSVNVTYRDGRTAYLQQ 60
Query: 60 L 60
+
Sbjct: 61 I 61
>gi|358254548|dbj|GAA55787.1| small nuclear ribonucleoprotein D3 [Clonorchis sinensis]
Length = 715
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/53 (73%), Positives = 47/53 (88%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+GIPIK+LH+AEGH+IT ET NG++FRGKLVEAEDNMN MAD+ +T RDG
Sbjct: 1 MSVGIPIKVLHDAEGHVITLETVNGEVFRGKLVEAEDNMNIQMADIILTARDG 53
>gi|324540294|gb|ADY49583.1| Small nuclear ribonucleoprotein Sm D3, partial [Ascaris suum]
Length = 143
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
+IG+PIK+LHEAEGHI+T ETT G+++RGKL+EAEDNMNC M+DV VT+RDG + V
Sbjct: 3 AIGVPIKILHEAEGHIVTLETTIGEVYRGKLIEAEDNMNCQMSDVNVTYRDGRTHQLDNV 62
Query: 62 PIAG 65
I G
Sbjct: 63 FIRG 66
>gi|313228903|emb|CBY18055.1| unnamed protein product [Oikopleura dioica]
Length = 124
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIK+LHEAE H+ITCET+ G++FRGKLVEAE++MN M DVT T+R+G+ A
Sbjct: 1 MSLGIPIKVLHEAESHVITCETSTGEVFRGKLVEAEEHMNIQMQDVTATYRNGSTAQLAN 60
Query: 61 VPIAG 65
+ I G
Sbjct: 61 IYIRG 65
>gi|209732182|gb|ACI66960.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 128
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 47/53 (88%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIK+LHEAEGHI+T ET G+++RGKL+ AEDNMNC M+++TVT RDG
Sbjct: 1 MSIGVPIKILHEAEGHIVTGETNTGEVYRGKLIGAEDNMNCQMSNITVTHRDG 53
>gi|170574009|ref|XP_001892634.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|170579971|ref|XP_001895061.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|312076574|ref|XP_003140922.1| small nuclear ribonucleoprotein Sm D3 [Loa loa]
gi|158598127|gb|EDP36091.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
gi|158601689|gb|EDP38531.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
gi|307763915|gb|EFO23149.1| small nuclear ribonucleoprotein Sm D3 [Loa loa]
gi|402590446|gb|EJW84376.1| small nuclear ribonucleoprotein Sm D3 [Wuchereria bancrofti]
Length = 138
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG-TYYL 57
+IG+PIK+LHEAEGH+IT ETT G+++RGKL EAEDNMNC M++VTVT+RDG T++L
Sbjct: 3 AIGVPIKILHEAEGHVITLETTIGEVYRGKLNEAEDNMNCQMSEVTVTYRDGRTHHL 59
>gi|170585533|ref|XP_001897537.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|158595042|gb|EDP33618.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
Length = 91
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG-TYYL 57
+IG+PIK+LHEAEGH+IT ETT G+++RGKL EAEDNMNC M++VTVT+RDG T++L
Sbjct: 3 AIGVPIKILHEAEGHVITLETTIGEVYRGKLNEAEDNMNCQMSEVTVTYRDGRTHHL 59
>gi|340383261|ref|XP_003390136.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Amphimedon
queenslandica]
Length = 131
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIPIKLLHEAEGHI+T ET G+++RGKL+EAEDNMNC + +VTVT R G
Sbjct: 1 MSIGIPIKLLHEAEGHIVTLETVMGEIYRGKLLEAEDNMNCQLQNVTVTNRSG 53
>gi|308482400|ref|XP_003103403.1| CRE-SNR-1 protein [Caenorhabditis remanei]
gi|308259824|gb|EFP03777.1| CRE-SNR-1 protein [Caenorhabditis remanei]
Length = 152
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
S+G+PIK+LHEAEGH++T ET G+++RGKL+EAEDNMNC +++ VTFRDG +
Sbjct: 3 SVGVPIKILHEAEGHVVTLETVTGEVYRGKLIEAEDNMNCQLSETIVTFRDGRSH 57
>gi|442762477|gb|JAA73397.1| Putative small nuclear ribonucleoprotein sm d3, partial [Ixodes
ricinus]
Length = 119
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 44/47 (93%)
Query: 7 IKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IK+LHEAEGHI+TCET G+++RGKLVEAEDNMNC MA++TVT+RDG
Sbjct: 4 IKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG 50
>gi|341886102|gb|EGT42037.1| CBN-SNR-1 protein [Caenorhabditis brenneri]
Length = 136
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
S+G+PIK+LHEAEGH +T ET G+++RGKL+EAEDNMNC +A+ VTFRDG +
Sbjct: 3 SVGVPIKILHEAEGHTVTLETVTGEVYRGKLIEAEDNMNCQLAETIVTFRDGRSH 57
>gi|111226987|ref|XP_001134627.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|90971301|gb|EAS66961.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 146
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIP+K+LHEA+GHI+T E NG+L+RG L+E+EDNMNC M ++TVT RDG
Sbjct: 1 MSIGIPVKILHEADGHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTARDG 53
>gi|17542052|ref|NP_503027.1| Protein SNR-1 [Caenorhabditis elegans]
gi|21542463|sp|Q17348.2|SMD3_CAEEL RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|5832794|emb|CAB55132.1| Protein SNR-1 [Caenorhabditis elegans]
Length = 136
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
S+G+PIK+LHEAEGH++T ET G+++RGKL EAEDNMNC +A+ VTFRDG +
Sbjct: 3 SVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSH 57
>gi|430811877|emb|CCJ30671.1| unnamed protein product [Pneumocystis jirovecii]
Length = 114
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
SIGIP+KLLHEA GHI+TCE +NG +RGKL+EAEDNMN + D+TVT RDG +
Sbjct: 3 SIGIPLKLLHEATGHIVTCELSNGSTYRGKLLEAEDNMNIQLKDITVTARDGRVF 57
>gi|268534544|ref|XP_002632403.1| C. briggsae CBR-SNR-1 protein [Caenorhabditis briggsae]
Length = 136
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
S+G+PIK+LHEAEGH +T ET G+++RGKL+EAEDNMNC +++ VTFRDG +
Sbjct: 3 SVGVPIKILHEAEGHTVTLETVTGEVYRGKLIEAEDNMNCQLSETIVTFRDGRSH 57
>gi|330802087|ref|XP_003289052.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
gi|325080886|gb|EGC34423.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
Length = 149
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIP+K+LHEA+GHI+T E NG+L+RG L+E+EDNMNC M ++TVT +DG
Sbjct: 1 MSIGIPVKILHEADGHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTAKDG 53
>gi|226472944|emb|CAX71158.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
Length = 147
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+GIPIK+LH+AEGH++T ET +G++FRGKLVEAEDNMN M D+ +T RDG
Sbjct: 1 MSVGIPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG 53
>gi|56756683|gb|AAW26514.1| SJCHGC04758 protein [Schistosoma japonicum]
gi|226469480|emb|CAX76570.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469482|emb|CAX76571.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469484|emb|CAX76572.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469486|emb|CAX76573.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469488|emb|CAX76574.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469490|emb|CAX76575.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469492|emb|CAX76576.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469494|emb|CAX76577.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469496|emb|CAX76578.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226472942|emb|CAX71157.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
Length = 130
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+GIPIK+LH+AEGH++T ET +G++FRGKLVEAEDNMN M D+ +T RDG
Sbjct: 1 MSVGIPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG 53
>gi|221131194|ref|XP_002165640.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Hydra
magnipapillata]
Length = 130
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIG+PIK+LHEAEGHI+T ET G+++RGKL+EAEDNMNC + +T+T RDG
Sbjct: 4 SIGVPIKVLHEAEGHIVTLETLTGEVYRGKLLEAEDNMNCQLTHITMTARDG 55
>gi|384497430|gb|EIE87921.1| hypothetical protein RO3G_12632 [Rhizopus delemar RA 99-880]
Length = 129
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 44/53 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+IG+PIKLLHEA+GHII+ E G L+RGKL+EAEDNMN + D+TVT RDG
Sbjct: 1 MTIGVPIKLLHEAQGHIISLELKTGQLYRGKLLEAEDNMNIQLKDITVTARDG 53
>gi|333656534|gb|AEF68170.1| Sm-D3-like protein [Physarum polycephalum]
Length = 134
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+PIKLLHEAEGHI+T E G+++RG+L+E+EDNMNC + ++T+T RDG
Sbjct: 1 MSIGVPIKLLHEAEGHIVTIELKTGEVYRGQLIESEDNMNCQLGNITLTARDG 53
>gi|256083677|ref|XP_002578067.1| small nuclear ribonucleoprotein SM-D3 [Schistosoma mansoni]
gi|68165953|gb|AAY87930.1| small nuclear ribonucleoprotein SM-D3 [Schistosoma mansoni]
gi|353230790|emb|CCD77207.1| putative small nuclear ribonucleoprotein SM-D3 [Schistosoma
mansoni]
Length = 130
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+GIPIK+LH+AEGH++T ET +G++FRGKLVEAEDNMN M D+ +T RDG
Sbjct: 1 MSVGIPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG 53
>gi|290983277|ref|XP_002674355.1| predicted protein [Naegleria gruberi]
gi|284087945|gb|EFC41611.1| predicted protein [Naegleria gruberi]
Length = 134
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLLHEAE HII+ ET +G+L+RGKL+EAED+MN + DVTVT R+G
Sbjct: 4 NIGIPIKLLHEAESHIISLETKSGELYRGKLIEAEDSMNVQLVDVTVTHRNG 55
>gi|281201849|gb|EFA76057.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 351
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 45/53 (84%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIP+K+LHEA+ H+IT E NGDL+RG L+E+EDNMNC M ++T+T ++G
Sbjct: 70 MSIGIPVKILHEADSHVITLELRNGDLYRGTLIESEDNMNCRMENITMTAKNG 122
>gi|428184458|gb|EKX53313.1| hypothetical protein GUITHDRAFT_84386 [Guillardia theta CCMP2712]
Length = 130
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG+P+KLLHEAE HIIT E +G+L+RG L EAEDNMNC M +VT+T RDG+
Sbjct: 1 MSIGVPVKLLHEAESHIITVELKSGELYRGTLQEAEDNMNCNMTNVTMTGRDGSISTLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VFIRG 65
>gi|367024463|ref|XP_003661516.1| hypothetical protein MYCTH_2301009 [Myceliophthora thermophila
ATCC 42464]
gi|347008784|gb|AEO56271.1| hypothetical protein MYCTH_2301009 [Myceliophthora thermophila
ATCC 42464]
Length = 114
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 SIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|367037323|ref|XP_003649042.1| hypothetical protein THITE_57872, partial [Thielavia terrestris
NRRL 8126]
gi|346996303|gb|AEO62706.1| hypothetical protein THITE_57872, partial [Thielavia terrestris
NRRL 8126]
Length = 114
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 SIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|340904841|gb|EGS17209.1| small nuclear ribonucleoprotein smD3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 114
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIGIPIKLL+EA+GHI+T E T G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 SIGIPIKLLNEAQGHIVTLELTTGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|336269505|ref|XP_003349513.1| hypothetical protein SMAC_03101 [Sordaria macrospora k-hell]
gi|380093412|emb|CCC09070.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 116
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|451851728|gb|EMD65026.1| hypothetical protein COCSADRAFT_36375 [Cochliobolus sativus
ND90Pr]
gi|451995470|gb|EMD87938.1| hypothetical protein COCHEDRAFT_1183070 [Cochliobolus
heterostrophus C5]
Length = 116
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GHI+T E T+G+++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAAGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|189199034|ref|XP_001935854.1| small nuclear ribonucleoprotein Sm D3 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|330913493|ref|XP_003296291.1| hypothetical protein PTT_05811 [Pyrenophora teres f. teres 0-1]
gi|187982953|gb|EDU48441.1| small nuclear ribonucleoprotein Sm D3 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|311331686|gb|EFQ95612.1| hypothetical protein PTT_05811 [Pyrenophora teres f. teres 0-1]
Length = 118
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GHI+T E T+G+++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAAGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|169614183|ref|XP_001800508.1| hypothetical protein SNOG_10228 [Phaeosphaeria nodorum SN15]
gi|160707292|gb|EAT82563.2| hypothetical protein SNOG_10228 [Phaeosphaeria nodorum SN15]
Length = 117
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GHIIT E T+G+++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAAGHIITLEITSGEVYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|116206378|ref|XP_001228998.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183079|gb|EAQ90547.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 115
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|85102544|ref|XP_961352.1| small nuclear ribonucleoprotein Sm D3 [Neurospora crassa OR74A]
gi|12718393|emb|CAC28701.1| probable small nuclear ribonucleoprotein SM D3 [Neurospora
crassa]
gi|28922896|gb|EAA32116.1| small nuclear ribonucleoprotein Sm D3 [Neurospora crassa OR74A]
Length = 116
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|171693559|ref|XP_001911704.1| hypothetical protein [Podospora anserina S mat+]
gi|170946728|emb|CAP73532.1| unnamed protein product [Podospora anserina S mat+]
Length = 118
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG 55
>gi|295658451|ref|XP_002789786.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225682914|gb|EEH21198.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
gi|226282930|gb|EEH38496.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226290365|gb|EEH45849.1| small nuclear ribonucleoprotein Sm D3 [Paracoccidioides
brasiliensis Pb18]
gi|327350126|gb|EGE78983.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
ATCC 18188]
Length = 116
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|340519305|gb|EGR49544.1| predicted protein [Trichoderma reesei QM6a]
gi|358388432|gb|EHK26025.1| hypothetical protein TRIVIDRAFT_27430, partial [Trichoderma
virens Gv29-8]
gi|358392460|gb|EHK41864.1| hypothetical protein TRIATDRAFT_134655, partial [Trichoderma
atroviride IMI 206040]
Length = 114
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHIIT E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|212538165|ref|XP_002149238.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|242807429|ref|XP_002484954.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
stipitatus ATCC 10500]
gi|210068980|gb|EEA23071.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|218715579|gb|EED15001.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
stipitatus ATCC 10500]
Length = 116
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|119174174|ref|XP_001239448.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|258569991|ref|XP_002543799.1| small nuclear ribonucleoprotein SM D3 [Uncinocarpus reesii 1704]
gi|303314089|ref|XP_003067053.1| small nuclear ribonucleoprotein Sm D3, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|237904069|gb|EEP78470.1| small nuclear ribonucleoprotein SM D3 [Uncinocarpus reesii 1704]
gi|240106721|gb|EER24908.1| small nuclear ribonucleoprotein Sm D3, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320037285|gb|EFW19222.1| small nuclear ribonucleoprotein Sm D3 [Coccidioides posadasii
str. Silveira]
gi|392869636|gb|EAS28151.2| small nuclear ribonucleoprotein Sm D3 [Coccidioides immitis RS]
Length = 116
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|440634941|gb|ELR04860.1| small nuclear ribonucleoprotein D3 [Geomyces destructans
20631-21]
Length = 117
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|400601331|gb|EJP68974.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 115
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHIIT E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|239613701|gb|EEQ90688.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
ER-3]
Length = 123
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|296810002|ref|XP_002845339.1| small nuclear ribonucleoprotein SM D3 [Arthroderma otae CBS
113480]
gi|238842727|gb|EEQ32389.1| small nuclear ribonucleoprotein SM D3 [Arthroderma otae CBS
113480]
Length = 116
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH+IT E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVITLEITSGHVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|402079014|gb|EJT74279.1| small nuclear ribonucleoprotein Sm D3 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 130
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHIIT E T G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIITLEITTGQTYRGKLIEAEDNMNIQLRDITVTARDG 55
>gi|310799322|gb|EFQ34215.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 115
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|347841024|emb|CCD55596.1| hypothetical protein [Botryotinia fuckeliana]
Length = 117
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHVVTLEITTGQVYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|315044655|ref|XP_003171703.1| small nuclear ribonucleoprotein SM D3 [Arthroderma gypseum CBS
118893]
gi|327297404|ref|XP_003233396.1| small nuclear ribonucleoprotein Sm D3 [Trichophyton rubrum CBS
118892]
gi|311344046|gb|EFR03249.1| small nuclear ribonucleoprotein SM D3 [Arthroderma gypseum CBS
118893]
gi|326464702|gb|EGD90155.1| small nuclear ribonucleoprotein Sm D3 [Trichophyton rubrum CBS
118892]
gi|326472436|gb|EGD96445.1| pre-mRNA splicing factor [Trichophyton tonsurans CBS 112818]
gi|326481659|gb|EGE05669.1| small nuclear ribonucleoprotein D3 polypeptide [Trichophyton
equinum CBS 127.97]
Length = 116
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGHVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|380480731|emb|CCF42263.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 138
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|406867417|gb|EKD20455.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 115
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|70993910|ref|XP_751802.1| small nuclear ribonucleoprotein SmD3 [Aspergillus fumigatus
Af293]
gi|119500466|ref|XP_001266990.1| small nuclear ribonucleoprotein SmD3, putative [Neosartorya
fischeri NRRL 181]
gi|145258404|ref|XP_001402031.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus niger CBS
513.88]
gi|66849436|gb|EAL89764.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
fumigatus Af293]
gi|119415155|gb|EAW25093.1| small nuclear ribonucleoprotein SmD3, putative [Neosartorya
fischeri NRRL 181]
gi|134074637|emb|CAK44670.1| unnamed protein product [Aspergillus niger]
gi|159125281|gb|EDP50398.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
fumigatus A1163]
gi|350632459|gb|EHA20827.1| hypothetical protein ASPNIDRAFT_204683 [Aspergillus niger ATCC
1015]
gi|358370798|dbj|GAA87408.1| small nuclear ribonucleoprotein SmD3 [Aspergillus kawachii IFO
4308]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|326428962|gb|EGD74532.1| small nuclear ribonucleoprotein Sm D3 [Salpingoeca sp. ATCC
50818]
Length = 128
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+ +P+KL+HEAEGH IT E NG+++RGKL+EAEDNMN M DVT T RDG
Sbjct: 4 VSVPVKLMHEAEGHTITIELKNGEMYRGKLIEAEDNMNSQMRDVTFTARDG 54
>gi|115492327|ref|XP_001210791.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus terreus
NIH2624]
gi|169771623|ref|XP_001820281.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus oryzae RIB40]
gi|238485796|ref|XP_002374136.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
flavus NRRL3357]
gi|83768140|dbj|BAE58279.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|114197651|gb|EAU39351.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus terreus
NIH2624]
gi|220699015|gb|EED55354.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
flavus NRRL3357]
gi|391871729|gb|EIT80886.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus oryzae 3.042]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|255948872|ref|XP_002565203.1| Pc22g12590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592220|emb|CAP98547.1| Pc22g12590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425774880|gb|EKV13173.1| Small nuclear ribonucleoprotein SmD3, putative [Penicillium
digitatum PHI26]
gi|425780976|gb|EKV18959.1| Small nuclear ribonucleoprotein SmD3, putative [Penicillium
digitatum Pd1]
Length = 117
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTIEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|67523101|ref|XP_659611.1| hypothetical protein AN2007.2 [Aspergillus nidulans FGSC A4]
gi|40745683|gb|EAA64839.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487374|tpe|CBF86001.1| TPA: small nuclear ribonucleoprotein SmD3, putative
(AFU_orthologue; AFUA_4G10240) [Aspergillus nidulans
FGSC A4]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|313214383|emb|CBY42774.1| unnamed protein product [Oikopleura dioica]
Length = 137
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M++G+P+K+LHEAEGH +T E+ G+L+RG L+EAEDNMN + DV+ T+RDG
Sbjct: 1 MTLGVPVKVLHEAEGHTVTVESATGELYRGVLIEAEDNMNMQLRDVSATYRDG 53
>gi|320589183|gb|EFX01645.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 116
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RG+L+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGRLLEAEDNMNVQLKDITVTARDG 55
>gi|302410425|ref|XP_003003046.1| small nuclear ribonucleoprotein Sm D3 [Verticillium albo-atrum
VaMs.102]
gi|261358070|gb|EEY20498.1| small nuclear ribonucleoprotein Sm D3 [Verticillium albo-atrum
VaMs.102]
Length = 154
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHIIT E T+G +RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNIQLKDITVTARDG 55
>gi|261193182|ref|XP_002622997.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
SLH14081]
gi|239589132|gb|EEQ71775.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
SLH14081]
Length = 124
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|159480580|ref|XP_001698360.1| small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158282100|gb|EDP07853.1| small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 127
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IGIP+KLLHEAEGH++T E +G+++RG+L +AEDNMNC + DVT T RDG
Sbjct: 8 IGIPVKLLHEAEGHVVTVELKSGEMYRGELCDAEDNMNCQLKDVTATGRDG 58
>gi|302909812|ref|XP_003050156.1| hypothetical protein NECHADRAFT_84991 [Nectria haematococca mpVI
77-13-4]
gi|256731093|gb|EEU44443.1| hypothetical protein NECHADRAFT_84991 [Nectria haematococca mpVI
77-13-4]
Length = 384
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL++AEDNMN + D+TVT RDG
Sbjct: 274 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG 325
>gi|46123175|ref|XP_386141.1| hypothetical protein FG05965.1 [Gibberella zeae PH-1]
Length = 365
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL++AEDNMN + D+TVT RDG
Sbjct: 254 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG 305
>gi|313220248|emb|CBY31107.1| unnamed protein product [Oikopleura dioica]
gi|313235868|emb|CBY11255.1| unnamed protein product [Oikopleura dioica]
Length = 162
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M++G+P+K+LHEAEGH +T E+ G+L+RG L+EAEDNMN + DV+ T+RDG
Sbjct: 1 MTLGVPVKVLHEAEGHTVTVESATGELYRGVLIEAEDNMNMQLRDVSATYRDG 53
>gi|62664874|ref|XP_577651.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
gi|109508438|ref|XP_001063748.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
Length = 142
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 48/61 (78%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG PI++L EA+G+++T ET G+++ GKL+EAEDNMNC M+++TVT+RDG P
Sbjct: 1 MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQ 60
Query: 61 V 61
V
Sbjct: 61 V 61
>gi|389644246|ref|XP_003719755.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae 70-15]
gi|351639524|gb|EHA47388.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae 70-15]
gi|440466514|gb|ELQ35778.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae Y34]
gi|440477082|gb|ELQ58226.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae P131]
Length = 119
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHIIT E T G +RGKL++AEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIITLEITTGQTYRGKLIDAEDNMNIQLRDITVTARDG 55
>gi|302830880|ref|XP_002947006.1| small nuclear ribonucleoprotein [Volvox carteri f. nagariensis]
gi|300268050|gb|EFJ52232.1| small nuclear ribonucleoprotein [Volvox carteri f. nagariensis]
Length = 129
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVP 62
IGIP+KLLHEAEGH++T E +G+++RG+L EAEDNMN + DVT T RDG A +
Sbjct: 8 IGIPVKLLHEAEGHVVTVELKSGEMYRGELFEAEDNMNVQLKDVTATGRDGRVSQLAHIF 67
Query: 63 IAG 65
I G
Sbjct: 68 IRG 70
>gi|322694233|gb|EFY86068.1| small nuclear ribonucleoprotein Sm D3 [Metarhizium acridum CQMa
102]
Length = 113
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL++AEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG 55
>gi|345560308|gb|EGX43433.1| hypothetical protein AOL_s00215g169 [Arthrobotrys oligospora ATCC
24927]
Length = 123
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIGIP+KLL E++GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 3 SIGIPLKLLGESQGHVVTLELTSGQVYRGKLLEAEDNMNVQLKDITVTARDG 54
>gi|121707652|ref|XP_001271900.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
clavatus NRRL 1]
gi|119400048|gb|EAW10474.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
clavatus NRRL 1]
Length = 136
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|378726753|gb|EHY53212.1| small nuclear ribonucleoprotein D3 [Exophiala dermatitidis
NIH/UT8656]
Length = 116
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+EAEDNMN + D+T T RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLELTSGQVYRGKLLEAEDNMNVQLKDITATARDG 58
>gi|342888751|gb|EGU87970.1| hypothetical protein FOXB_01453 [Fusarium oxysporum Fo5176]
gi|408397687|gb|EKJ76827.1| hypothetical protein FPSE_03013 [Fusarium pseudograminearum
CS3096]
Length = 115
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GHI+T E T+G +RGKL++AEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG 55
>gi|154286938|ref|XP_001544264.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407905|gb|EDN03446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225555382|gb|EEH03674.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces capsulatus
G186AR]
gi|240273870|gb|EER37389.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325094696|gb|EGC48006.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces capsulatus
H88]
Length = 116
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E +G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEILSGQVYRGKLLEAEDNMNVQLKDITVTARDG 58
>gi|392577030|gb|EIW70160.1| hypothetical protein TREMEDRAFT_38820 [Tremella mesenterica DSM
1558]
Length = 124
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
++G+P+KLLHE+ GH++T E G+++RGKL+EAEDN+N A+ D+TVT RDG +V
Sbjct: 3 NLGVPVKLLHESLGHVVTVELKTGEMYRGKLMEAEDNLNIALKDITVTARDGRVSQMDMV 62
Query: 62 PIAG 65
I G
Sbjct: 63 YIRG 66
>gi|407923942|gb|EKG17004.1| hypothetical protein MPH_05830 [Macrophomina phaseolina MS6]
Length = 114
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH++T E T G ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEATGHVVTLELTTGHVYRGKLLEAEDNMNVQLKDITVTARDG 55
>gi|328866082|gb|EGG14468.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 170
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+P+K+LHEA+ HI+T E NG+++RG L+++EDNMNC + VT+T RDG
Sbjct: 1 MSIGVPVKILHEADSHIVTIELKNGEMYRGTLMQSEDNMNCKLKIVTMTARDG 53
>gi|154299390|ref|XP_001550114.1| hypothetical protein BC1G_10957 [Botryotinia fuckeliana B05.10]
Length = 117
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T G ++RGKL+ AEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQGHVVTLEITTGQVYRGKLLGAEDNMNVQLKDITVTARDG 55
>gi|403373657|gb|EJY86747.1| Small nuclear ribonucleoprotein [Oxytricha trifallax]
Length = 692
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
MSIG+PIKLLHEAE H+IT E +G+L+RG L+EAED MN + DV VT +DG Y
Sbjct: 1 MSIGVPIKLLHEAENHVITVELKSGELYRGYLMEAEDTMNMRLDDVYVTGKDGRQY 56
>gi|167524150|ref|XP_001746411.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775173|gb|EDQ88798.1| predicted protein [Monosiga brevicollis MX1]
Length = 325
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
I +PIK++HE EGH++T E NG+++RGKLVEAEDNMN + DVT T RDG
Sbjct: 175 ISVPIKIMHEGEGHVVTIELKNGEIYRGKLVEAEDNMNSQLRDVTFTARDG 225
>gi|403412007|emb|CCL98707.1| predicted protein [Fibroporia radiculosa]
Length = 127
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+GIP+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGIPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 56
>gi|392569479|gb|EIW62652.1| small nuclear ribonucleo protein Sm D3 [Trametes versicolor
FP-101664 SS1]
Length = 131
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+GIP+KLLHE+ GH+IT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGIPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTQRDG 56
>gi|390602523|gb|EIN11916.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 127
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+GIP+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGIPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 56
>gi|336363219|gb|EGN91635.1| hypothetical protein SERLA73DRAFT_192176 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384161|gb|EGO25309.1| hypothetical protein SERLADRAFT_465253 [Serpula lacrymans var.
lacrymans S7.9]
Length = 127
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+ +G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 4 VGLGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 56
>gi|393244822|gb|EJD52333.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 126
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+P+KLLHEA GHIIT E G L+RGKL+EAED++N ++ D+TVT RDG
Sbjct: 4 TLGVPVKLLHEAMGHIITVELKTGQLYRGKLLEAEDSLNISLKDITVTGRDG 55
>gi|320165991|gb|EFW42890.1| small nuclear ribonucleoprotein Sm D3 [Capsaspora owczarzaki ATCC
30864]
Length = 135
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MSIG PIK+LHEA GHI+T E +++RGKL + EDNMNC + D+T T RDG
Sbjct: 1 MSIGTPIKVLHEAVGHIVTIELKTSEVYRGKLFQVEDNMNCQLEDITFTSRDGQVSRLQQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|169846820|ref|XP_001830124.1| small nuclear ribonucleoprotein Sm D3 [Coprinopsis cinerea
okayama7#130]
gi|116508894|gb|EAU91789.1| small nuclear ribonucleoprotein Sm D3 [Coprinopsis cinerea
okayama7#130]
Length = 126
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 56
>gi|170087186|ref|XP_001874816.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650016|gb|EDR14257.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 127
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 5 LGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 55
>gi|392594010|gb|EIW83335.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 125
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GH+IT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 4 LGVPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTARDG 54
>gi|409080651|gb|EKM81011.1| hypothetical protein AGABI1DRAFT_112714 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197565|gb|EKV47492.1| hypothetical protein AGABI2DRAFT_192678 [Agaricus bisporus var.
bisporus H97]
Length = 128
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG 56
>gi|395333040|gb|EJF65418.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 128
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GH+IT E G L+RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 6 LGVPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTQRDG 56
>gi|354547206|emb|CCE43940.1| hypothetical protein CPAR2_501650 [Candida parapsilosis]
Length = 106
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GHIIT E TNGD +RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGIPVRLLNEAQGHIITIELTNGDTYRGKLLENEDNMNASLFDVTIT 49
>gi|448515433|ref|XP_003867337.1| Smd3 core snRNP protein [Candida orthopsilosis Co 90-125]
gi|380351676|emb|CCG21899.1| Smd3 core snRNP protein [Candida orthopsilosis]
Length = 106
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GHIIT E TNGD +RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGIPVRLLNEAQGHIITIELTNGDTYRGKLLENEDNMNSSLFDVTIT 49
>gi|393217444|gb|EJD02933.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 126
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+G+P+KLLHE+ GH+IT E G L+RGKL EAED++N ++ D+TVT RDG
Sbjct: 4 SLGVPVKLLHESLGHVITVELKTGQLYRGKLAEAEDSLNISLKDITVTGRDG 55
>gi|452822235|gb|EME29256.1| small nuclear ribonucleoprotein D3 [Galdieria sulphuraria]
Length = 125
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIKLLHEA +T ET +GDL+RG L +AEDNMNC + VT T RDG +
Sbjct: 1 MSVGIPIKLLHEAISQTVTVETKSGDLYRGTLYDAEDNMNCQLKKVTCTGRDG-----KI 55
Query: 61 VPIAGMWNGTSGLRW 75
P ++ S +R+
Sbjct: 56 TPFEHVFLRGSKIRF 70
>gi|353236668|emb|CCA68658.1| related to small nuclear ribonucleoprotein sm d3 [Piriformospora
indica DSM 11827]
Length = 129
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+P+KLLHEA GH+IT E G L+RGKL EAED++N ++ D+TVT RDG
Sbjct: 4 TLGVPVKLLHEALGHVITVELKTGQLYRGKLAEAEDSLNISLKDITVTGRDG 55
>gi|401887212|gb|EJT51213.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS
2479]
Length = 200
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 44/52 (84%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+P+KLLHE+ GHI+T E G+++RGKL+EAED++N A+ D+TVT RDG
Sbjct: 3 NLGVPVKLLHESLGHIVTVELKTGEMYRGKLMEAEDSLNMALKDITVTARDG 54
>gi|449546694|gb|EMD37663.1| hypothetical protein CERSUDRAFT_123559 [Ceriporiopsis
subvermispora B]
Length = 127
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ ++TVT RDG
Sbjct: 6 LGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKEITVTQRDG 56
>gi|19112491|ref|NP_595699.1| Sm snRNP core protein Smd3 [Schizosaccharomyces pombe 972h-]
gi|12230614|sp|Q9UUC6.1|SMD3_SCHPO RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|5689996|emb|CAB52041.1| Sm snRNP core protein Smd3 [Schizosaccharomyces pombe]
Length = 97
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 7 IKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IKLLHE +GHI+T E NG +RGKL+EAEDNMNC M D++VT RDG
Sbjct: 5 IKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDG 51
>gi|448082089|ref|XP_004195048.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|448086614|ref|XP_004196142.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|359376470|emb|CCE87052.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|359377564|emb|CCE85947.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
Length = 106
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP+KLL+EA+GHII+ E T GD++RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGIPVKLLNEAQGHIISVELTTGDIYRGKLLENEDNMNLSLYDVTIT 49
>gi|302679434|ref|XP_003029399.1| hypothetical protein SCHCODRAFT_16877 [Schizophyllum commune
H4-8]
gi|300103089|gb|EFI94496.1| hypothetical protein SCHCODRAFT_16877 [Schizophyllum commune
H4-8]
Length = 125
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GHIIT E G L+RGKL EAEDN+N ++ ++TVT RDG
Sbjct: 5 LGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKEITVTGRDG 55
>gi|297845022|ref|XP_002890392.1| hypothetical protein ARALYDRAFT_335306 [Arabidopsis lyrata subsp.
lyrata]
gi|297336234|gb|EFH66651.1| hypothetical protein ARALYDRAFT_335306 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GHI+T E +G+L+RG ++E EDN NC + D+T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGK 56
>gi|440790083|gb|ELR11371.1| LSM domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 136
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIPIK+ HEA+GH +T E G+++RG+L + EDNMNC MA++ T RDG
Sbjct: 1 MSIGIPIKVFHEAKGHTVTIELKTGEVYRGQLGDTEDNMNCQMANIQYTARDG 53
>gi|302811572|ref|XP_002987475.1| hypothetical protein SELMODRAFT_183167 [Selaginella
moellendorffii]
gi|300144881|gb|EFJ11562.1| hypothetical protein SELMODRAFT_183167 [Selaginella
moellendorffii]
Length = 135
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEAEGH++T E +G+L+RG L+E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAEGHVVTVELKSGELYRGTLIECEDNWNCQLENITYTAKDGK 56
>gi|254567285|ref|XP_002490753.1| Core Sm protein Sm D3 [Komagataella pastoris GS115]
gi|238030549|emb|CAY68473.1| Core Sm protein Sm D3 [Komagataella pastoris GS115]
Length = 100
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M++ IP+KLL+EA+GHII+ E T+G+ +RGKLVE+ED+MN + DVT+T +DG
Sbjct: 1 MALSIPVKLLNEAQGHIISAELTSGESYRGKLVESEDSMNIQLKDVTLTAQDG 53
>gi|389741899|gb|EIM83087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 126
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+ GH+IT E G L+RGKL EAEDN+N ++ ++TVT RDG
Sbjct: 5 LGVPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKEITVTGRDG 55
>gi|302796635|ref|XP_002980079.1| hypothetical protein SELMODRAFT_112116 [Selaginella
moellendorffii]
gi|300152306|gb|EFJ18949.1| hypothetical protein SELMODRAFT_112116 [Selaginella
moellendorffii]
Length = 95
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEAEGH++T E +G+L+RG L+E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAEGHVVTVELKSGELYRGTLIECEDNWNCQLENITYTAKDG 55
>gi|296005187|ref|XP_002808925.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
gi|225631811|emb|CAX64206.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
Length = 116
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIKLLHE GH I+ ET +G L+RG L+ AEDNMNC + +V+V +DG L
Sbjct: 1 MSVGIPIKLLHEGIGHTISVETKSGILYRGTLLFAEDNMNCLLENVSVVKKDGKQILLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|21555384|gb|AAM63846.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
Length = 131
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GHI+T E +G+L+RG ++E EDN NC + D+T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGK 56
>gi|149237821|ref|XP_001524787.1| small nuclear ribonucleoprotein Sm D3 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146451384|gb|EDK45640.1| small nuclear ribonucleoprotein Sm D3 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 106
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 42/49 (85%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GHI++ E NGD++RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGIPVRLLNEAQGHIVSIEVNNGDVYRGKLLENEDNMNSSLYDVTIT 49
>gi|58264244|ref|XP_569278.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107716|ref|XP_777469.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321248376|ref|XP_003191109.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|50260161|gb|EAL22822.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223928|gb|AAW41971.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317457576|gb|ADV19322.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
gi|405118776|gb|AFR93550.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii
H99]
Length = 124
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 43/52 (82%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+P+KLLHE+ GHIIT E G+++RGKL+EAED +N A+ ++TVT RDG
Sbjct: 3 NLGVPVKLLHESLGHIITVELKTGEMYRGKLMEAEDTLNIALREITVTARDG 54
>gi|18394883|ref|NP_564119.1| small nuclear ribonucleoprotein-like protein [Arabidopsis
thaliana]
gi|8886923|gb|AAF80609.1|AC069251_2 F2D10.7 [Arabidopsis thaliana]
gi|15724292|gb|AAL06539.1|AF412086_1 At1g20580/F2D10_6 [Arabidopsis thaliana]
gi|20334748|gb|AAM16235.1| At1g20580/F2D10_6 [Arabidopsis thaliana]
gi|332191869|gb|AEE29990.1| small nuclear ribonucleoprotein-like protein [Arabidopsis
thaliana]
Length = 131
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GHI+T E +G+L+RG ++E EDN NC + D+T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGK 56
>gi|328856039|gb|EGG05162.1| hypothetical protein MELLADRAFT_48913 [Melampsora larici-populina
98AG31]
Length = 138
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 16/89 (17%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT------- 54
+IG+P KLLHEA GH+IT E G ++RGKL +AEDN+N ++ D+TVT RDG
Sbjct: 4 NIGVPTKLLHEALGHVITVELKTGQVYRGKLHDAEDNLNISLKDITVTHRDGRVTQLDQV 63
Query: 55 ---------YYLPALVPIAGMWNGTSGLR 74
Y +P ++ A M+ +G++
Sbjct: 64 YIRGPMIRLYVIPDMLQNAPMFKRGTGVK 92
>gi|363751767|ref|XP_003646100.1| hypothetical protein Ecym_4216 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889735|gb|AET39283.1| hypothetical protein Ecym_4216 [Eremothecium cymbalariae
DBVPG#7215]
Length = 102
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
GIP+KLL+EA+GH ++ E T G+ +RGKLVE+EDNMNC + DVT T R+G
Sbjct: 5 GIPVKLLNEAQGHTVSLELTTGETYRGKLVESEDNMNCQLRDVTATARNG 54
>gi|331242127|ref|XP_003333710.1| small nuclear ribonucleoprotein D3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309312700|gb|EFP89291.1| small nuclear ribonucleoprotein D3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 131
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IG+P KLLHEA GH+IT E G ++RGKL +AEDN+N ++ D+TVT RDG
Sbjct: 4 NIGVPTKLLHEALGHVITVELKTGQVYRGKLHDAEDNLNISLKDITVTHRDG 55
>gi|449302555|gb|EMC98564.1| hypothetical protein BAUCODRAFT_137738 [Baudoinia compniacensis
UAMH 10762]
Length = 116
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH +T E +G +RGKL+EAEDNMNC + ++ VT RDG
Sbjct: 4 TIGIPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNCQLENINVTQRDG 55
>gi|323454301|gb|EGB10171.1| hypothetical protein AURANDRAFT_36815 [Aureococcus
anophagefferens]
Length = 113
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+PIKLLHE EGH++T E NG+++RG L E+E+ MNC + DV VT RDG
Sbjct: 7 AVGVPIKLLHEGEGHMVTIELKNGEIYRGHLDESEETMNCLVTDVVVTARDG 58
>gi|8778615|gb|AAF79623.1|AC027665_24 F5M15.9 [Arabidopsis thaliana]
Length = 207
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GHI+T E +G+L+RG ++E EDN NC + D+T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG 55
>gi|358055777|dbj|GAA98122.1| hypothetical protein E5Q_04805 [Mixia osmundae IAM 14324]
Length = 128
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
SIGIP KLLHE+ GH+IT E G +RGKL++AEDN+N +M+ +TVT RDG
Sbjct: 4 SIGIPCKLLHESVGHVITIELKTGQTYRGKLLDAEDNLNISMSQITVTQRDG 55
>gi|156097204|ref|XP_001614635.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium vivax Sal-1]
gi|148803509|gb|EDL44908.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
vivax]
Length = 116
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIKLLHE GH I+ ET G L+RG L+ AEDNMNC + +V+V +DG L
Sbjct: 1 MSVGIPIKLLHEGIGHTISVETKAGVLYRGTLLFAEDNMNCLLENVSVVKKDGKQILLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|67476256|ref|XP_653731.1| small nuclear ribonucleoprotein [Entamoeba histolytica HM-1:IMSS]
gi|56470719|gb|EAL48353.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709025|gb|EMD48372.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
KU27]
Length = 111
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
M+IG P+K+ HE++G I+T E G+ +RG++VE EDNMNC + DVT+T +DG+
Sbjct: 1 MNIGAPLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQSRTEY 60
Query: 61 VPIAG 65
+ I G
Sbjct: 61 IFIRG 65
>gi|389582938|dbj|GAB65674.1| small nuclear ribonucleoprotein [Plasmodium cynomolgi strain B]
Length = 116
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIKLLHE GH I+ ET G L+RG L+ AEDNMNC + +V+V +DG L
Sbjct: 1 MSVGIPIKLLHEGIGHTISVETKAGVLYRGTLLFAEDNMNCLLENVSVVKKDGKQILLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|145344044|ref|XP_001416549.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576775|gb|ABO94842.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHE+EGH++T E G+ +RG+LVE+EDN NC M DVT RDG
Sbjct: 5 VGVPVKLLHESEGHVVTVELKTGETYRGQLVESEDNWNCQMTDVTHVGRDG 55
>gi|50545379|ref|XP_500227.1| YALI0A19030p [Yarrowia lipolytica]
gi|49646092|emb|CAG84160.1| YALI0A19030p [Yarrowia lipolytica CLIB122]
Length = 105
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
GIP+KLL EA+GH++T E T+G +RGKL+EAEDNMN + DVTVT R G
Sbjct: 5 GIPLKLLSEAQGHVVTVELTSGHTYRGKLIEAEDNMNVQIRDVTVTARGG 54
>gi|50422631|ref|XP_459888.1| DEHA2E13420p [Debaryomyces hansenii CBS767]
gi|49655556|emb|CAG88129.1| DEHA2E13420p [Debaryomyces hansenii CBS767]
Length = 106
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP+KLL+EA+GHII+ E T GD +RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGIPVKLLNEAQGHIISLELTTGDTYRGKLLENEDNMNLSLYDVTIT 49
>gi|328351139|emb|CCA37539.1| Calcium-binding mitochondrial carrier protein SCaMC-1-B
[Komagataella pastoris CBS 7435]
Length = 521
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 46/56 (82%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
M++ IP+KLL+EA+GHII+ E T+G+ +RGKLVE+ED+MN + DVT+T +DG +
Sbjct: 1 MALSIPVKLLNEAQGHIISAELTSGESYRGKLVESEDSMNIQLKDVTLTAQDGKKF 56
>gi|167378504|ref|XP_001734822.1| small nuclear ribonucleoprotein Sm D3 [Entamoeba dispar SAW760]
gi|165903473|gb|EDR29003.1| small nuclear ribonucleoprotein Sm D3, putative [Entamoeba dispar
SAW760]
Length = 111
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
M+IG P+K+ HE++G I+T E G+ +RG++VE EDNMNC + DVT+T +DG+
Sbjct: 1 MNIGAPLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQSRTEY 60
Query: 61 VPIAG 65
+ I G
Sbjct: 61 IFIRG 65
>gi|301108107|ref|XP_002903135.1| small nuclear ribonucleoprotein Sm D3 [Phytophthora infestans
T30-4]
gi|262097507|gb|EEY55559.1| small nuclear ribonucleoprotein Sm D3 [Phytophthora infestans
T30-4]
Length = 113
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
++G+PI LLHE EG +T E NG+++RG L E+ED+MNC ++DV +T RDG LV
Sbjct: 4 TVGVPISLLHEGEGRTVTIELKNGEVYRGHLTESEDSMNCQLSDVVLTQRDGQKSKLELV 63
Query: 62 PIAG 65
+ G
Sbjct: 64 YVRG 67
>gi|398407783|ref|XP_003855357.1| hypothetical protein MYCGRDRAFT_36580 [Zymoseptoria tritici
IPO323]
gi|339475241|gb|EGP90333.1| hypothetical protein MYCGRDRAFT_36580 [Zymoseptoria tritici
IPO323]
Length = 119
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH +T E T+G +RGKL+EAEDNMN + ++ VT RDG
Sbjct: 4 TIGIPIKLLNEATGHQVTVEITSGQTYRGKLIEAEDNMNVQLENINVTQRDG 55
>gi|298714042|emb|CBJ27274.1| Small nuclear ribonucleoprotein-associated protein D3 [Ectocarpus
siliculosus]
Length = 113
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+PIKLLHE EGH +T E NG+++RG L EAED MNC M VT+T RDG
Sbjct: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDG 54
>gi|221054464|ref|XP_002258371.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193808440|emb|CAQ39143.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 116
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
MS+GIPIKLLHE GH I+ ET G L+RG L+ AEDNMNC + +V+V +DG L
Sbjct: 1 MSVGIPIKLLHEGIGHTISVETKAGVLYRGTLLFAEDNMNCLLENVSVIKKDGKQILLEQ 60
Query: 61 VPIAG 65
V I G
Sbjct: 61 VYIRG 65
>gi|336473142|gb|EGO61302.1| hypothetical protein NEUTE1DRAFT_107812 [Neurospora tetrasperma
FGSC 2508]
Length = 247
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 11/63 (17%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVE-----------AEDNMNCAMADVTVTF 50
+IGIPIKLL+EA+GHI+T E T+G +RGKL+E AEDNMN + D+TVT
Sbjct: 124 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAMLTNALPPKTAEDNMNVQLKDITVTA 183
Query: 51 RDG 53
RDG
Sbjct: 184 RDG 186
>gi|407038001|gb|EKE38889.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 111
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
M+IG P+K+ HE++G I+T E G+ +RG++VE EDNMNC + DVT+T +DG+
Sbjct: 1 MNIGAPLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQSRTEY 60
Query: 61 VPIAG 65
+ I G
Sbjct: 61 IFIRG 65
>gi|224065689|ref|XP_002301922.1| predicted protein [Populus trichocarpa]
gi|222843648|gb|EEE81195.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GHI+T E +G+L+RG +VE EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDG 55
>gi|260947028|ref|XP_002617811.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238847683|gb|EEQ37147.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 106
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 41/49 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS G+P++LL+EA+GHI++ E T GD +RGKL+E EDNMN ++ DVT+T
Sbjct: 1 MSAGVPVRLLNEAQGHIVSLELTTGDTYRGKLIENEDNMNLSLYDVTIT 49
>gi|452985910|gb|EME85666.1| hypothetical protein MYCFIDRAFT_52885 [Pseudocercospora fijiensis
CIRAD86]
Length = 115
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH +T E +G +RG+L+EAEDNMNC + ++ VT RDG
Sbjct: 4 TIGIPIKLLNEATGHQVTVEIDSGQTYRGRLIEAEDNMNCQLENINVTQRDG 55
>gi|350293601|gb|EGZ74686.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 11/63 (17%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVE-----------AEDNMNCAMADVTVTF 50
+IGIPIKLL+EA+GHI+T E T+G +RGKL+E AEDNMN + D+TVT
Sbjct: 113 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLIEAMLTNALPPKTAEDNMNVQLKDITVTA 172
Query: 51 RDG 53
RDG
Sbjct: 173 RDG 175
>gi|255539216|ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
gi|223551374|gb|EEF52860.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
Length = 131
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GHI+T E +G+L+RG +VE EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGK 56
>gi|255718497|ref|XP_002555529.1| KLTH0G11396p [Lachancea thermotolerans]
gi|238936913|emb|CAR25092.1| KLTH0G11396p [Lachancea thermotolerans CBS 6340]
Length = 102
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S GIPIKLL E++GH+++ E T G+ +RGKLV++EDNMN + DVT T RDG+
Sbjct: 3 SNGIPIKLLTESQGHVVSLELTTGEAYRGKLVDSEDNMNVQLRDVTATARDGS 55
>gi|402224280|gb|EJU04343.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 127
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IG+PIKLLHE+ GH+IT E G +RGKL +AED++N ++ D+TVT RDG
Sbjct: 4 TIGVPIKLLHESLGHVITVELKTGQTYRGKLADAEDSLNISLRDITVTGRDG 55
>gi|212538167|ref|XP_002149239.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|210068981|gb|EEA23072.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
Length = 114
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+GH++T E T+G ++RGKL+ EDNMN + D+TVT RDG
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGQVYRGKLL--EDNMNVQLKDITVTARDG 56
>gi|224083270|ref|XP_002306975.1| predicted protein [Populus trichocarpa]
gi|222856424|gb|EEE93971.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GHI+T E +G+L+RG +VE EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDGK 56
>gi|388579924|gb|EIM20243.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 123
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+PIKL+HE+ GH++T E +G ++RGKL EAEDN+N ++ D+TVT RDG
Sbjct: 4 VPIKLVHESLGHVVTIELKSGQMYRGKLQEAEDNLNVSLQDITVTARDG 52
>gi|351721470|ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
gi|356525557|ref|XP_003531391.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Glycine
max]
gi|255626793|gb|ACU13741.1| unknown [Glycine max]
Length = 131
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGK 56
>gi|388502716|gb|AFK39424.1| unknown [Lotus japonicus]
Length = 133
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 6 SLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGK 58
>gi|209881474|ref|XP_002142175.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209557781|gb|EEA07826.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 126
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIP+K+L+E GHII+ E +GDL+RG L EDNMNC + V VT +DG
Sbjct: 1 MSIGIPVKILYEGLGHIISIEMKSGDLYRGTLAHVEDNMNCMLDTVNVTMKDG 53
>gi|429329451|gb|AFZ81210.1| LSM domain-containing protein [Babesia equi]
Length = 121
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIGIP+KLL+E GHI+T E N L+RG L EDNMNC + VT+T +DG
Sbjct: 1 MSIGIPVKLLYEGIGHIVTAELQNSQLYRGTLTNVEDNMNCLLEGVTLTMKDG 53
>gi|147822390|emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera]
Length = 116
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGK 56
>gi|357519697|ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
gi|355524159|gb|AET04613.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
gi|388503694|gb|AFK39913.1| unknown [Medicago truncatula]
Length = 131
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGK 56
>gi|414865765|tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea mays]
Length = 126
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
S+GIP+KLLHEA GH++T E G+++RG LVE EDN NC + ++T T +DG V
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDGKVSQLEHV 63
Query: 62 PIAG 65
I G
Sbjct: 64 FIRG 67
>gi|225428263|ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
gi|297744494|emb|CBI37756.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGK 56
>gi|66362186|ref|XP_628057.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
gi|46227630|gb|EAK88565.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
Length = 143
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+IGIP+KLL+E GHI+T E +GDL+RG L EDNMNC + V T RDG
Sbjct: 23 MTIGIPLKLLYEGLGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDG 75
>gi|67601489|ref|XP_666403.1| aspartyl protease-like [Cryptosporidium hominis TU502]
gi|54657392|gb|EAL36172.1| aspartyl protease-like [Cryptosporidium hominis]
Length = 128
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+IGIP+KLL+E GHI+T E +GDL+RG L EDNMNC + V T RDG
Sbjct: 1 MTIGIPLKLLYEGLGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDG 53
>gi|303273780|ref|XP_003056242.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462326|gb|EEH59618.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 122
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IGIP+KLLHEAEGH +T E NG+ +RG L+E+EDN NC + +T T RDG
Sbjct: 9 IGIPVKLLHEAEGHTVTIELKNGETYRGTLLESEDNWNCQLEGITQTGRDG 59
>gi|255726920|ref|XP_002548386.1| small nuclear ribonucleoprotein Sm D3 [Candida tropicalis
MYA-3404]
gi|240134310|gb|EER33865.1| small nuclear ribonucleoprotein Sm D3 [Candida tropicalis
MYA-3404]
Length = 106
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 41/49 (83%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GH+I+ E TNGD +RGKL+E EDNMN ++ + TVT
Sbjct: 1 MSAGIPVRLLNEAQGHVISIELTNGDTYRGKLLENEDNMNLSLYEATVT 49
>gi|195657699|gb|ACG48317.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|414865766|tpg|DAA44323.1| TPA: small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG LVE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG 55
>gi|195656155|gb|ACG47545.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E G+++RG LVE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDGK 56
>gi|300175666|emb|CBK20977.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
M+ +PIKLLHE EG+ + E TNG+ +RG LV AEDNMNC + +VT+ RDG
Sbjct: 1 MASSVPIKLLHEGEGNTVIVELTNGEKYRGHLVRAEDNMNCQLTNVTMRARDGK 54
>gi|195658123|gb|ACG48529.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG LVE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG 55
>gi|449455595|ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH+++ E +G+L+RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGK 56
>gi|449512675|ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH+++ E +G+L+RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGK 56
>gi|45200940|ref|NP_986510.1| AGL157Cp [Ashbya gossypii ATCC 10895]
gi|44985710|gb|AAS54334.1| AGL157Cp [Ashbya gossypii ATCC 10895]
gi|374109756|gb|AEY98661.1| FAGL157Cp [Ashbya gossypii FDAG1]
Length = 102
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
GIP+KLL+EA+GH ++ E T G+ +RGKLV +EDNMNC + DVT T R+G
Sbjct: 5 GIPVKLLNEAQGHTVSLELTTGETYRGKLVGSEDNMNCQLRDVTATARNG 54
>gi|168011639|ref|XP_001758510.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168011861|ref|XP_001758621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690120|gb|EDQ76488.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690231|gb|EDQ76599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEAEGHI+T E +G+++RG L+E EDN N + +T T +DG
Sbjct: 4 SLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDG 55
>gi|399215849|emb|CCF72537.1| unnamed protein product [Babesia microti strain RI]
Length = 142
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG P+KLL+E GHIIT E+ NG L+RG L ED MNC M V VT RDG
Sbjct: 27 MSIGTPVKLLYEGIGHIITAESCNGLLYRGTLTNVEDTMNCLMEGVVVTMRDG 79
>gi|453087211|gb|EMF15252.1| Sm-like ribonucleo protein, partial [Mycosphaerella populorum
SO2202]
Length = 115
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH +T E +G +RGKL+EAEDNMN + ++ VT RDG
Sbjct: 4 TIGIPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNVQLENINVTQRDG 55
>gi|255081394|ref|XP_002507919.1| predicted protein [Micromonas sp. RCC299]
gi|226523195|gb|ACO69177.1| predicted protein [Micromonas sp. RCC299]
Length = 123
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IGIP+KLLHEAEGH +T E GD +RG L+EAEDN NC + +T T RDG
Sbjct: 9 IGIPVKLLHEAEGHTVTIELKTGDTYRGTLLEAEDNWNCQLEGITHTGRDG 59
>gi|452845934|gb|EME47867.1| hypothetical protein DOTSEDRAFT_42182 [Dothistroma septosporum
NZE10]
Length = 115
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA GH +T E +G +RGKL+EAEDNMN + ++ VT RDG
Sbjct: 4 TIGIPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNVQLENINVTQRDG 55
>gi|15223010|ref|NP_177757.1| snRNP core protein SMD3 [Arabidopsis thaliana]
gi|6554488|gb|AAF16670.1|AC012394_19 putative small nuclear ribonucleoprotein Sm D3; 79504-78381
[Arabidopsis thaliana]
gi|6573711|gb|AAF17631.1|AC009978_7 T23E18.23 [Arabidopsis thaliana]
gi|14190503|gb|AAK55732.1|AF380651_1 At1g76300/F15M4_20 [Arabidopsis thaliana]
gi|15809764|gb|AAL06810.1| At1g76300/F15M4_20 [Arabidopsis thaliana]
gi|21592857|gb|AAM64807.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332197701|gb|AEE35822.1| snRNP core protein SMD3 [Arabidopsis thaliana]
Length = 128
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHE+ GHI++ E +G+L+RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYTAKDGK 56
>gi|116780936|gb|ABK21888.1| unknown [Picea sitchensis]
Length = 133
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDGK 56
>gi|294874372|ref|XP_002766923.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|294881753|ref|XP_002769480.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239868298|gb|EEQ99640.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239872939|gb|EER02198.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
Length = 119
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++GIPIKLLHE+ GH +T E G+L+RG L+ EDNMN +A+V VT RDG
Sbjct: 3 AVGIPIKLLHESVGHTVTVEMQTGELYRGHLIHTEDNMNLLIAEVVVTRRDG 54
>gi|148909638|gb|ABR17910.1| unknown [Picea sitchensis]
Length = 133
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDGK 56
>gi|223975955|gb|ACN32165.1| unknown [Zea mays]
gi|413935154|gb|AFW69705.1| hypothetical protein ZEAMMB73_559735 [Zea mays]
Length = 125
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG 55
>gi|68531941|ref|XP_723655.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478019|gb|EAA15220.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 215
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G PIKL+HE GH I+ ET +G L+RG L+ AEDNMNC +++VTV +DG
Sbjct: 1 MSVGTPIKLIHEGIGHTISVETKSGILYRGILLFAEDNMNCLLSNVTVVKQDG 53
>gi|226507464|ref|NP_001150683.1| LOC100284316 [Zea mays]
gi|194696928|gb|ACF82548.1| unknown [Zea mays]
gi|195619600|gb|ACG31630.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|195641042|gb|ACG39989.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|413956400|gb|AFW89049.1| Small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG 55
>gi|359491835|ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
vinifera]
gi|297745546|emb|CBI40711.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDGK 56
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIP+KL+HEA GH+IT E G +RG L +AEDN N AM D+TVT DG
Sbjct: 3 TIGIPVKLIHEAVGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDG 54
>gi|388516583|gb|AFK46353.1| unknown [Lotus japonicus]
Length = 132
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHE+ GHI++ E +G+L+RG ++E EDN NC + +T T +DG
Sbjct: 4 SLGIPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGK 56
>gi|226505392|ref|NP_001152085.1| LOC100285722 [Zea mays]
gi|194699166|gb|ACF83667.1| unknown [Zea mays]
gi|195652485|gb|ACG45710.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|413935155|gb|AFW69706.1| Small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG 55
>gi|242041599|ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
gi|241922048|gb|EER95192.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
Length = 132
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDG 55
>gi|50307679|ref|XP_453819.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642953|emb|CAH00915.1| KLLA0D17160p [Kluyveromyces lactis]
Length = 100
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IPIKLL+E++GH IT E NGD++RGKLVE EDNMNC + DV T +G
Sbjct: 3 AIPIKLLNESQGHEITLELNNGDMYRGKLVENEDNMNCQLRDVIFTQANG 52
>gi|50294275|ref|XP_449549.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528863|emb|CAG62525.1| unnamed protein product [Candida glabrata]
Length = 99
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
IP+KLL EA+GH++T E NGD +RGKLVE+EDNMN + DV VT
Sbjct: 3 NIPVKLLSEAQGHVVTIELNNGDTYRGKLVESEDNMNVQLRDVMVT 48
>gi|115443639|ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|41052905|dbj|BAD07817.1| putative small nuclear ribonucleoprotein polypeptide D3 [Oryza
sativa Japonica Group]
gi|41053239|dbj|BAD08200.1| putative small nuclear ribonucleoprotein polypeptide D3 [Oryza
sativa Japonica Group]
gi|113535130|dbj|BAF07513.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|215692366|dbj|BAG87786.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692586|dbj|BAG88006.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737277|dbj|BAG96206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189864|gb|EEC72291.1| hypothetical protein OsI_05466 [Oryza sativa Indica Group]
gi|222621997|gb|EEE56129.1| hypothetical protein OsJ_05002 [Oryza sativa Japonica Group]
Length = 132
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDG 55
>gi|118490850|ref|XP_001238734.1| small nuclear ribonucleoprotein (snrnp),putative [Eimeria tenella
strain Houghton]
gi|109238517|emb|CAK51481.1| small nuclear ribonucleoprotein (snrnp),putative [Eimeria
tenella]
Length = 125
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 37/52 (71%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHE GH IT ET G L+RG L AEDNMN + VTVT +DG
Sbjct: 6 SVGIPVKLLHEGLGHTITVETKTGSLYRGTLENAEDNMNMLIQGVTVTHKDG 57
>gi|357145745|ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Brachypodium distachyon]
Length = 134
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG ++E EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG 55
>gi|241955335|ref|XP_002420388.1| small nuclear ribonucleoprotein, putative; snRNP core protein,
putative [Candida dubliniensis CD36]
gi|223643730|emb|CAX41466.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 106
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GHII+ E NGD +RGKL+E EDNMN ++ + T+T
Sbjct: 1 MSAGIPVRLLNEAQGHIISIELVNGDTYRGKLLENEDNMNLSLYEATIT 49
>gi|125543063|gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indica Group]
gi|125585557|gb|EAZ26221.1| hypothetical protein OsJ_10089 [Oryza sativa Japonica Group]
Length = 134
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDG 55
>gi|296083703|emb|CBI23692.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRD 52
S+GIP+KLLHEA GH++T E +G+L+RG ++E EDN NC + ++T T +D
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKD 54
>gi|343427423|emb|CBQ70950.1| related to small nuclear ribonucleoprotein sm d3 [Sporisorium
reilianum SRZ2]
Length = 136
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIP+KL+HEA GH+IT E G +RG L +AEDN N AM D+TVT DG
Sbjct: 3 TIGIPVKLIHEAVGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDG 54
>gi|115451821|ref|NP_001049511.1| Os03g0240800 [Oryza sativa Japonica Group]
gi|108707095|gb|ABF94890.1| Small nuclear ribonucleoprotein Sm D3, putative, expressed [Oryza
sativa Japonica Group]
gi|113547982|dbj|BAF11425.1| Os03g0240800 [Oryza sativa Japonica Group]
gi|215686515|dbj|BAG87776.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765251|dbj|BAG86948.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768316|dbj|BAH00545.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S+GIP+KLLHEA GH++T E G+++RG +VE EDN NC + ++T T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDG 55
>gi|84996607|ref|XP_953025.1| snRNP protein [Theileria annulata strain Ankara]
gi|65304021|emb|CAI76400.1| snRNP protein, putative [Theileria annulata]
Length = 118
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG PIKLL+E GH++T E N +L+RG L EDNMNC M V +T +DG
Sbjct: 1 MSIGAPIKLLYEGIGHVVTVELQNSNLYRGTLTNVEDNMNCLMEGVVMTMKDG 53
>gi|146415963|ref|XP_001483951.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|146391076|gb|EDK39234.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 106
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP+KLL+EA+GH+++ E GD +RGKL+E EDNMN ++ DV VT
Sbjct: 1 MSAGIPVKLLNEAQGHVVSLELVTGDTYRGKLLENEDNMNLSLYDVVVT 49
>gi|68489557|ref|XP_711397.1| hypothetical protein CaO19.11622 [Candida albicans SC5314]
gi|68489657|ref|XP_711350.1| hypothetical protein CaO19.4146 [Candida albicans SC5314]
gi|46432646|gb|EAK92119.1| hypothetical protein CaO19.4146 [Candida albicans SC5314]
gi|46432696|gb|EAK92167.1| hypothetical protein CaO19.11622 [Candida albicans SC5314]
gi|238882554|gb|EEQ46192.1| small nuclear ribonucleoprotein Sm D3 [Candida albicans WO-1]
Length = 106
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS GIP++LL+EA+GHII+ E NGD +RGKL+E EDNMN ++ + T+T
Sbjct: 1 MSAGIPVRLLNEAQGHIISIELINGDTYRGKLLENEDNMNLSLYEATIT 49
>gi|294933185|ref|XP_002780640.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239890574|gb|EER12435.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
Length = 120
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++GIPIKLLHE+ GH +T E G+L+RG L+ EDNMN +A+V VT +DG
Sbjct: 3 AVGIPIKLLHESVGHTVTVEMQTGELYRGHLIHTEDNMNLLIAEVVVTRKDG 54
>gi|297839503|ref|XP_002887633.1| hypothetical protein ARALYDRAFT_476783 [Arabidopsis lyrata subsp.
lyrata]
gi|297333474|gb|EFH63892.1| hypothetical protein ARALYDRAFT_476783 [Arabidopsis lyrata subsp.
lyrata]
Length = 129
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHE+ GHI++ E +G+L+RG ++E EDN NC + ++T +DG
Sbjct: 4 SLGIPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYKAKDGK 56
>gi|147809809|emb|CAN60390.1| hypothetical protein VITISV_006493 [Vitis vinifera]
Length = 133
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++ E +G+L+RG ++E +DN NC + ++T T +DG
Sbjct: 5 SLGIPVKLLHEAAGHVVXVELKSGELYRGSMIECKDNWNCQLENITFTVKDGK 57
>gi|403224047|dbj|BAM42177.1| snRNP protein [Theileria orientalis strain Shintoku]
Length = 119
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG P+KLL+E GHI+T E N +L+RG L EDNMNC + VT+T +DG
Sbjct: 1 MSIGAPVKLLYEGIGHIVTIELQNSNLYRGTLTNVEDNMNCLLEGVTMTTKDG 53
>gi|384251125|gb|EIE24603.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 124
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+P+KLLHEAEGH+IT E +G+ +RG+L EAED+ N + VT T +DG
Sbjct: 7 VGVPVKLLHEAEGHVITVELKSGETYRGELAEAEDSWNVQLKQVTATAKDG 57
>gi|254584500|ref|XP_002497818.1| ZYRO0F14212p [Zygosaccharomyces rouxii]
gi|238940711|emb|CAR28885.1| ZYRO0F14212p [Zygosaccharomyces rouxii]
Length = 100
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
IP+KLL+EA+GH+++ E T G+ +RGKLVE+EDNMN + DVTVT
Sbjct: 4 IPVKLLNEAQGHVVSLELTTGETYRGKLVESEDNMNVQLRDVTVT 48
>gi|164661203|ref|XP_001731724.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
gi|159105625|gb|EDP44510.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
Length = 126
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++GIP+KLLHE GH +T E G +RG+L +AEDN N +M D+ VT RDG
Sbjct: 3 TVGIPVKLLHEGLGHTVTIELKGGATYRGRLFDAEDNFNISMKDIAVTARDG 54
>gi|71028700|ref|XP_763993.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68350947|gb|EAN31710.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 118
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG PIKLL+E GH++T E N +L+RG L EDNMNC + V +T +DG
Sbjct: 1 MSIGAPIKLLYEGIGHVVTVELQNSNLYRGTLTNVEDNMNCLLEGVVMTMKDG 53
>gi|156084564|ref|XP_001609765.1| small nuclear ribonucleoprotein (snRNP) [Babesia bovis T2Bo]
gi|154797017|gb|EDO06197.1| small nuclear ribonucleoprotein (snRNP), putative [Babesia bovis]
Length = 110
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG P+KL +E GHI+T E N L+RG LV EDNMNC + VT+ +DG
Sbjct: 1 MSIGTPVKLFYEGIGHIVTVEMQNSQLYRGTLVNVEDNMNCLLEGVTMVMKDG 53
>gi|344301770|gb|EGW32075.1| hypothetical protein SPAPADRAFT_138952 [Spathaspora passalidarum
NRRL Y-27907]
Length = 103
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 1 MSI-GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS+ GIP++LL+EA+GH+I+ E T GD +RGKL+E EDNMN ++ DV +T
Sbjct: 1 MSVAGIPVRLLNEAQGHVISVELTTGDTYRGKLLENEDNMNLSLYDVVIT 50
>gi|366991799|ref|XP_003675665.1| hypothetical protein NCAS_0C03090 [Naumovozyma castellii CBS
4309]
gi|342301530|emb|CCC69299.1| hypothetical protein NCAS_0C03090 [Naumovozyma castellii CBS
4309]
Length = 102
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
S IP+KLL+EA+GHI++ E T G+ +RGKL+E+EDNMN + DV VT D
Sbjct: 3 SNSIPVKLLNEAQGHIVSIELTTGETYRGKLIESEDNMNVQLRDVVVTQTDS 54
>gi|367016010|ref|XP_003682504.1| hypothetical protein TDEL_0F04820 [Torulaspora delbrueckii]
gi|359750166|emb|CCE93293.1| hypothetical protein TDEL_0F04820 [Torulaspora delbrueckii]
Length = 100
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IP+KLL+EA+GHI++ E T G+ +RGKLVE+EDNMN + D TVT D
Sbjct: 3 SIPVKLLNEAQGHIVSLELTTGETYRGKLVESEDNMNVQLRDATVTGADS 52
>gi|126133653|ref|XP_001383351.1| hypothetical protein PICST_13887 [Scheffersomyces stipitis CBS
6054]
gi|126095500|gb|ABN65322.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 97
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
GIP++LL+EA+GH+I+ E T GD +RGKL+E EDNMN ++ DV +T
Sbjct: 2 GIPVRLLNEAQGHVISLELTTGDTYRGKLLENEDNMNLSLYDVVIT 47
>gi|68076469|ref|XP_680154.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium berghei
strain ANKA]
gi|56501047|emb|CAH95430.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
berghei]
Length = 126
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLV----------EAEDNMNCAMADVTVTF 50
MS+G PIKL+HE GH I+ ET +G L+RG LV AEDNMNC +A+VTV
Sbjct: 1 MSVGTPIKLIHEGIGHTISVETKSGILYRGILVCSVATRTIYLFAEDNMNCLLANVTVVK 60
Query: 51 RDGTYYLPALVPIAG 65
+DG L V I G
Sbjct: 61 QDGKQVLLEQVYIRG 75
>gi|156848641|ref|XP_001647202.1| hypothetical protein Kpol_1036p91 [Vanderwaltozyma polyspora DSM
70294]
gi|156117886|gb|EDO19344.1| hypothetical protein Kpol_1036p91 [Vanderwaltozyma polyspora DSM
70294]
Length = 100
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
IP+KLL EA+GH++T E + G+ +RGKLV++EDNMN + DVTVT
Sbjct: 4 IPLKLLSEAQGHVVTLELSTGETYRGKLVDSEDNMNVQLQDVTVT 48
>gi|410082351|ref|XP_003958754.1| hypothetical protein KAFR_0H02100 [Kazachstania africana CBS
2517]
gi|372465343|emb|CCF59619.1| hypothetical protein KAFR_0H02100 [Kazachstania africana CBS
2517]
Length = 102
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
MS IPIKLL+E++GHII+ E NGD +RGKL+ EDNMN + D VT
Sbjct: 1 MSSNIPIKLLNESQGHIISLELNNGDTYRGKLLTNEDNMNLQLRDTIVT 49
>gi|401411081|ref|XP_003884988.1| hypothetical protein NCLIV_053870 [Neospora caninum Liverpool]
gi|325119407|emb|CBZ54960.1| hypothetical protein NCLIV_053870 [Neospora caninum Liverpool]
Length = 132
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G P+KLL+E GH +T E +G+++RG L AEDNMNC + VTVT RDG
Sbjct: 3 TVGTPVKLLYEGLGHTVTVEIKSGEVYRGVLENAEDNMNCLLQTVTVTHRDG 54
>gi|237829847|ref|XP_002364221.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211961885|gb|EEA97080.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221487294|gb|EEE25526.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221507086|gb|EEE32690.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 131
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G P+KLL+E GH +T E +G+++RG L AEDNMNC + VTVT RDG
Sbjct: 3 TVGTPVKLLYEGLGHTVTVEIKSGEVYRGVLENAEDNMNCLLQTVTVTHRDG 54
>gi|388854781|emb|CCF51674.1| related to small nuclear ribonucleoprotein sm d3 [Ustilago
hordei]
Length = 134
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIP+KL+HEA GH+IT E G +RG L +AED+ N AM DVT T DG
Sbjct: 3 TIGIPVKLIHEAVGHVITVELKGGACYRGTLYDAEDSFNVAMKDVTATAPDG 54
>gi|396081074|gb|AFN82693.1| small nuclear D3-like ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 87
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M I +P+KLLHEA+G I+T ET+NGD++RG++ E +D MN + +VTVT
Sbjct: 1 MPITVPLKLLHEAQGFIVTIETSNGDMYRGRMKEIDDYMNVVLDEVTVT 49
>gi|401840421|gb|EJT43250.1| SMD3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 99
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
G+P+KLL+EA+GH++T E T G +RGKLVE+ED+MN + DVT T
Sbjct: 3 GVPVKLLNEAQGHVVTLELTTGATYRGKLVESEDSMNVQLRDVTAT 48
>gi|344229960|gb|EGV61845.1| hypothetical protein CANTEDRAFT_107251 [Candida tenuis ATCC
10573]
Length = 108
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTF-RDGT 54
I IP++LL EA+GHI+T E GD +RGKL+E EDNMN ++ DV +T R GT
Sbjct: 3 KIDIPVRLLTEAQGHIVTVELVTGDTYRGKLLENEDNMNLSLYDVVITKGRSGT 56
>gi|444314147|ref|XP_004177731.1| hypothetical protein TBLA_0A04160 [Tetrapisispora blattae CBS
6284]
gi|387510770|emb|CCH58212.1| hypothetical protein TBLA_0A04160 [Tetrapisispora blattae CBS
6284]
Length = 100
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+PIKLL EA+GHI++ E NG+ ++G+LVE+EDNMN + DV VT
Sbjct: 3 SVPIKLLSEAQGHIVSLELINGETYKGRLVESEDNMNVQLQDVLVT 48
>gi|322706526|gb|EFY98106.1| small nuclear ribonucleoprotein Sm D3 [Metarhizium anisopliae
ARSEF 23]
Length = 137
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 24/76 (31%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVE------------------------AED 37
+IGIPIKLL+EA+GHI+T E T+G +RGKL++ AED
Sbjct: 4 TIGIPIKLLNEAQGHIVTLEITSGQTYRGKLLDGTPPLGPLPRNIRTCRVLVLTSRLAED 63
Query: 38 NMNCAMADVTVTFRDG 53
NMN + D+TVT RDG
Sbjct: 64 NMNVQLKDITVTARDG 79
>gi|307109545|gb|EFN57783.1| hypothetical protein CHLNCDRAFT_143127 [Chlorella variabilis]
Length = 126
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+G+PIKLLHEA GH+ T E +G+++RG++ EAEDN N +++V T RDG
Sbjct: 12 VGVPIKLLHEATGHVCTVELKSGEIYRGEMYEAEDNWNVQLSNVQATGRDG 62
>gi|357113192|ref|XP_003558388.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
Sm D3-like [Brachypodium distachyon]
Length = 132
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
S+GIP+KLLHEA GH++T E G+++R ++E EDN NC + +++ T +DG
Sbjct: 4 SLGIPVKLLHEAAGHVVTVELKTGEVYRXSMLECEDNWNCQLENISFTAKDGK 56
>gi|387220181|gb|AFJ69799.1| small nuclear ribonucleoprotein D3, partial [Nannochloropsis
gaditana CCMP526]
Length = 133
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 41/63 (65%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVP 62
+GIPI LLH+AEG IIT ET G+L+RG L EAEDNMN + DVT T G L+
Sbjct: 9 VGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIY 68
Query: 63 IAG 65
I G
Sbjct: 69 IKG 71
>gi|401825715|ref|XP_003886952.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
gi|392998109|gb|AFM97971.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
Length = 87
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M++ +P+KLLHEA+G ++T ET NGD++RG++ E +D MN + +VTVT
Sbjct: 1 MAVTVPLKLLHEAQGFVVTVETNNGDMYRGRMKEVDDYMNVVLDEVTVT 49
>gi|70952429|ref|XP_745383.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium chabaudi
chabaudi]
gi|56525689|emb|CAH74732.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
chabaudi chabaudi]
Length = 129
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLV-------------EAEDNMNCAMADVT 47
MS+G PIKL+HE GH I+ ET +G L+RG LV AEDNMNC +++VT
Sbjct: 1 MSVGTPIKLIHEGIGHTISVETKSGILYRGTLVCSFMLILYFLKDLFAEDNMNCLLSNVT 60
Query: 48 VTFRDGTYYLPALVPIAG 65
V +DG L V I G
Sbjct: 61 VVKQDGKQVLLEQVYIRG 78
>gi|403213468|emb|CCK67970.1| hypothetical protein KNAG_0A02810 [Kazachstania naganishii CBS
8797]
Length = 100
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
+ IPIKLL EA+GHI+ E G+ +RG+L+ +EDNMN + DVTVT DG+
Sbjct: 1 MSIPIKLLQEAQGHIVDLELHTGETYRGRLIGSEDNMNVQLGDVTVTKVDGS 52
>gi|410956322|ref|XP_003984791.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Felis
catus]
Length = 131
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS + IK+LHEA GHI+TCET ++ GKL EDN+NC M+++ V +R+G
Sbjct: 1 MSYSVLIKVLHEAAGHIMTCETNTDKMYHGKLGGREDNINCRMSNIAVPYREG 53
>gi|219110787|ref|XP_002177145.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411680|gb|EEC51608.1| predicted protein, partial [Phaeodactylum tricornutum CCAP
1055/1]
Length = 87
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++G+PIKLL EAEG IT E NG+++RG LV AED MN +++DV T R+G
Sbjct: 3 TVGVPIKLLFEAEGMKITVEMKNGEIYRGLLVGAEDTMNVSLSDVLRTARNG 54
>gi|410730161|ref|XP_003671258.2| hypothetical protein NDAI_0G02400 [Naumovozyma dairenensis CBS
421]
gi|401780078|emb|CCD26015.2| hypothetical protein NDAI_0G02400 [Naumovozyma dairenensis CBS
421]
Length = 67
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IP+KLL+EA+GHI++ E G+ +RGKL+E+EDNMN + DV VT D
Sbjct: 3 SIPVKLLNEAQGHIVSVELATGETYRGKLIESEDNMNIQLRDVIVTGTDS 52
>gi|118387719|ref|XP_001026962.1| Sm protein [Tetrahymena thermophila]
gi|89308732|gb|EAS06720.1| Sm protein [Tetrahymena thermophila SB210]
Length = 2269
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MSIG+P+K+L E+E H++T E GD FRG L E+ED MN + +VT+ R+G
Sbjct: 1 MSIGLPVKILRESESHVVTIELKTGDQFRGYLAESEDTMNVRLDNVTMINRNG 53
>gi|296090161|emb|CBI39980.3| unnamed protein product [Vitis vinifera]
Length = 117
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTF 50
S+GIP+KLLHEA GH++ E +G+L+RG ++E +DN NC + ++T T+
Sbjct: 4 SLGIPVKLLHEAAGHVVIVELKSGELYRGSMIECKDNWNCQLENITFTW 52
>gi|168003064|ref|XP_001754233.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694787|gb|EDQ81134.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
S+GI +KLLHEAEGHI+T E +G+ +RG L+E EDN N + VT T DG V
Sbjct: 4 SLGILVKLLHEAEGHIVTVELKSGEAYRGSLIECEDNWNSQLESVTYTAMDGKVSQLEHV 63
Query: 62 PIAG 65
I G
Sbjct: 64 SIRG 67
>gi|45270956|gb|AAS56859.1| YLR147C [Saccharomyces cerevisiae]
Length = 101
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
GIP+KLL+EA+GHI++ E T G +RGKLVE+ED+MN + DV T G
Sbjct: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG 54
>gi|6323176|ref|NP_013248.1| Smd3p [Saccharomyces cerevisiae S288c]
gi|1173457|sp|P43321.1|SMD3_YEAST RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|807056|gb|AAB32821.1| Smd3 protein, snRNP protein Smd3=D core small nuclear
ribonucleoprotein [Saccharomyces cerevisiae, BJ3434,
Peptide, 101 aa]
gi|1262307|gb|AAB82381.1| Smd3p: Small nuclear ribonucleoprotein D3 homolog [Saccharomyces
cerevisiae]
gi|1360574|emb|CAA97719.1| SMD3 [Saccharomyces cerevisiae]
gi|151941309|gb|EDN59687.1| Sm D3 [Saccharomyces cerevisiae YJM789]
gi|190406176|gb|EDV09443.1| small nuclear ribonucleoprotein Sm D3 [Saccharomyces cerevisiae
RM11-1a]
gi|256273010|gb|EEU07972.1| Smd3p [Saccharomyces cerevisiae JAY291]
gi|259148134|emb|CAY81383.1| Smd3p [Saccharomyces cerevisiae EC1118]
gi|285813562|tpg|DAA09458.1| TPA: Smd3p [Saccharomyces cerevisiae S288c]
gi|323303905|gb|EGA57686.1| Smd3p [Saccharomyces cerevisiae FostersB]
gi|323308144|gb|EGA61397.1| Smd3p [Saccharomyces cerevisiae FostersO]
gi|323332570|gb|EGA73978.1| Smd3p [Saccharomyces cerevisiae AWRI796]
gi|323336667|gb|EGA77933.1| Smd3p [Saccharomyces cerevisiae Vin13]
gi|323353994|gb|EGA85847.1| Smd3p [Saccharomyces cerevisiae VL3]
gi|349579868|dbj|GAA25029.1| K7_Smd3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764414|gb|EHN05938.1| Smd3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392297664|gb|EIW08763.1| Smd3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 101
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
GIP+KLL+EA+GHI++ E T G +RGKLVE+ED+MN + DV T G
Sbjct: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG 54
>gi|449329731|gb|AGE96001.1| small nuclear ribonucleoprotein d3 [Encephalitozoon cuniculi]
Length = 87
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M++ +P+KLLHE++G I+T ET++GD++RG++ E +D MN + DV VT
Sbjct: 1 MAVTVPLKLLHESQGFIVTVETSSGDMYRGRVREVDDYMNLVLDDVVVT 49
>gi|19173042|ref|NP_597593.1| similarity to SMALL NUCLEAR RIBONUCLEOPROTEIN D3 [Encephalitozoon
cuniculi GB-M1]
gi|19168709|emb|CAD26228.1| similarity to SMALL NUCLEAR RIBONUCLEOPROTEIN D3 [Encephalitozoon
cuniculi GB-M1]
Length = 87
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M++ +P+KLLHE++G I+T ET++GD++RG++ E +D MN + DV VT
Sbjct: 1 MAVTVPLKLLHESQGFIVTVETSSGDMYRGRVREVDDYMNLVLDDVVVT 49
>gi|325192510|emb|CCA26944.1| small nuclear ribonucleoprotein Sm D3 putative [Albugo laibachii
Nc14]
Length = 112
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
++ +PI LLHE EG IT E NG+++RG L E+ED+MNC +++V ++ R+G
Sbjct: 4 TMAVPIALLHEGEGRNITVELKNGEIYRGHLEESEDSMNCQLSNVVLSARNG 55
>gi|145495655|ref|XP_001433820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145545630|ref|XP_001458499.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400940|emb|CAK66423.1| unnamed protein product [Paramecium tetraurelia]
gi|124426319|emb|CAK91102.1| unnamed protein product [Paramecium tetraurelia]
Length = 122
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K++HEA HI+T E G++F G + EAED MN + +V + RDG
Sbjct: 1 MSLGVPLKIMHEAAHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG 53
>gi|366999829|ref|XP_003684650.1| hypothetical protein TPHA_0C00590 [Tetrapisispora phaffii CBS
4417]
gi|357522947|emb|CCE62216.1| hypothetical protein TPHA_0C00590 [Tetrapisispora phaffii CBS
4417]
Length = 100
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
IPIKLL EA+GH+++ E + G+ +RGKLV++EDNMN + DVT T
Sbjct: 4 IPIKLLSEAQGHVVSLELSTGETYRGKLVDSEDNMNVQLRDVTHT 48
>gi|397638104|gb|EJK72932.1| hypothetical protein THAOC_05490 [Thalassiosira oceanica]
Length = 112
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
+IGIPIKLL+EAEG +T E +G+++RG L+ AED MN +++V T R+G + V
Sbjct: 3 NIGIPIKLLYEAEGMKVTVEMKSGEIYRGLLLNAEDTMNMTLSEVVRTGRNGQVTKHSTV 62
Query: 62 PIAGMWNGTSGLRW 75
+ G SG+R+
Sbjct: 63 YLRG-----SGIRF 71
>gi|384497172|gb|EIE87663.1| hypothetical protein RO3G_12374 [Rhizopus delemar RA 99-880]
Length = 119
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 10/53 (18%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+IG+PIKLLHEA+GHII+ E G L+RGKL+E D+TVT RDG
Sbjct: 1 MTIGVPIKLLHEAQGHIISLELKTGQLYRGKLLE----------DITVTARDG 43
>gi|412990430|emb|CCO19748.1| Small nuclear ribonucleoprotein Sm D3 [Bathycoccus prasinos]
Length = 131
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 24/77 (31%)
Query: 3 IGIPIKLLHEAEGHIITC------------------------ETTNGDLFRGKLVEAEDN 38
+GIP+KL+HE+EGH+IT E +G+L+RG LVEAEDN
Sbjct: 10 VGIPVKLMHESEGHVITVPSLHSFLSFSLSLTKTFLSCAQQVELKSGELYRGTLVEAEDN 69
Query: 39 MNCAMADVTVTFRDGTY 55
NC + +V+ T RDG +
Sbjct: 70 WNCQLTNVSHTARDGKH 86
>gi|145493031|ref|XP_001432512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399624|emb|CAK65115.1| unnamed protein product [Paramecium tetraurelia]
Length = 122
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K++HEA HI+T E G++F G + EAED MN + +V + RDG
Sbjct: 1 MSLGVPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG 53
>gi|145510771|ref|XP_001441315.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408561|emb|CAK73918.1| unnamed protein product [Paramecium tetraurelia]
Length = 363
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS+G+P+K++HEA HI+T E G++F G + EAED MN + +V + RDG
Sbjct: 1 MSLGVPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG 53
>gi|147768951|emb|CAN69253.1| hypothetical protein VITISV_038147 [Vitis vinifera]
Length = 611
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 8 KLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRD 52
+LLHEA GH++T E +G+LFRG L+E EDN NC + ++T T +D
Sbjct: 40 QLLHEAAGHVVTVELKSGELFRGSLIECEDNWNCQLENITFTVKD 84
>gi|406607031|emb|CCH41546.1| Small nuclear ribonucleoprotein Sm D3 [Wickerhamomyces ciferrii]
Length = 95
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 5/53 (9%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS GIP+KLL+EA+GHI++ E +G+ +R AEDNMN + D+T+T RDG
Sbjct: 1 MSAGIPVKLLNEAQGHIVSLELNSGETYR-----AEDNMNVQLNDITLTSRDG 48
>gi|303388687|ref|XP_003072577.1| small nuclear D3-like ribonucleoprotein [Encephalitozoon
intestinalis ATCC 50506]
gi|303301718|gb|ADM11217.1| small nuclear D3-like ribonucleoprotein [Encephalitozoon
intestinalis ATCC 50506]
Length = 86
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M + IP+KLLHEA+G ++T ET +GD++RG++ E +D MN + D VT
Sbjct: 1 MGVTIPLKLLHEAQGFVVTVETNSGDMYRGQMKEVDDYMNIILTDAVVT 49
>gi|328771488|gb|EGF81528.1| hypothetical protein BATDEDRAFT_7518, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 77
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 8 KLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+LLHEA GHI+T E G ++RGKL+ AEDNMN + D+T T R+G
Sbjct: 1 QLLHEAMGHIVTIELKTGSVYRGKLLNAEDNMNVQLRDITHTARNG 46
>gi|773428|gb|AAA65451.1| small nuclear ribonucleoprotein, partial [Caenorhabditis elegans]
Length = 71
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 14 EGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVPIAG 65
H++T ET G+++RGKL EAEDNMNC +A+ VTFRDG + V I G
Sbjct: 1 RSHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNVFIRG 52
>gi|323447696|gb|EGB03608.1| hypothetical protein AURANDRAFT_8431 [Aureococcus
anophagefferens]
Length = 118
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+G+P+ L+H+ EG I+T E NGD +RG L E EDNMNC + D T T
Sbjct: 3 VGVPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLKDATRT 49
>gi|323445642|gb|EGB02152.1| hypothetical protein AURANDRAFT_35508 [Aureococcus
anophagefferens]
Length = 87
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+G+P+ L+H+ EG I+T E NGD +RG L E EDNMNC + D T T
Sbjct: 9 VGVPLILMHDGEGTIVTIECKNGDTYRGFLDETEDNMNCVLKDATRT 55
>gi|42491563|gb|AAS16923.1| small nuclear ribonucleoprotein D3 polypeptide [Prionace glauca]
Length = 34
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 19 TCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRD 52
TCET G+++RGKL+EAEDNMNC M+++TVT+RD
Sbjct: 1 TCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRD 34
>gi|123480015|ref|XP_001323163.1| Sm protein [Trichomonas vaginalis G3]
gi|121906022|gb|EAY10940.1| Sm protein [Trichomonas vaginalis G3]
Length = 112
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
MS GIPIKLLHEA ++ GD +RG L EDNMNC + +V T +DG
Sbjct: 1 MSNGIPIKLLHEATNFVVEIHLNTGDSYRGTLKYVEDNMNCWLTNVVHTQKDG 53
>gi|443917507|gb|ELU38208.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 132
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IG+P+KLLHEA GHIIT E +G L+ ED++N ++ D+TVT RDG
Sbjct: 4 TIGVPVKLLHEALGHIITVELKSGALY------PEDSLNISLKDITVTGRDG 49
>gi|361128454|gb|EHL00389.1| putative Small nuclear ribonucleoprotein Sm D3 [Glarea lozoyensis
74030]
Length = 266
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 12/52 (23%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+ ++RGKL+EAEDNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQ------------VYRGKLLEAEDNMNVQLKDITVTARDG 43
>gi|224004388|ref|XP_002295845.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585877|gb|ACI64562.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 85
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTV 48
+GIPI LLH+AEG ++T ET G+L RG L EAED MN + V
Sbjct: 1 VGIPIVLLHDAEGAVVTVETKRGELIRGLLFEAEDMMNLYLKKAVV 46
>gi|301099995|ref|XP_002899088.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104400|gb|EEY62452.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 143
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+GIP LLH+ EG I++ E G+ +RG L E EDNMNC M D T
Sbjct: 9 VGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRT 55
>gi|348674274|gb|EGZ14093.1| hypothetical protein PHYSODRAFT_510917 [Phytophthora sojae]
Length = 146
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+GIP LLH+ EG I++ E G+ +RG L E EDNMNC M D T
Sbjct: 9 VGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRT 55
>gi|219122966|ref|XP_002181806.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407082|gb|EEC47020.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 95
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT 54
+GIPI +LH+AEG +I ET G+L RG L EAED MN + + V +G
Sbjct: 8 RVGIPIVVLHDAEGAVIEVETKKGELIRGLLFEAEDMMNLYIKNAVVLDPNGV 60
>gi|325182649|emb|CCA17104.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 133
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVP 62
+GIP LLH+ EG ++ E +G+++RG L E EDNMNC + + T +G LV
Sbjct: 9 VGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVY 68
Query: 63 IAG 65
+ G
Sbjct: 69 VRG 71
>gi|340508275|gb|EGR34016.1| lsm domain protein [Ichthyophthirius multifiliis]
Length = 93
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAE 36
MSIG+P+K+L E+E H+IT E GD FRG L E+E
Sbjct: 1 MSIGLPVKILRESESHVITVEMKTGDQFRGYLAESE 36
>gi|396476736|ref|XP_003840106.1| predicted protein [Leptosphaeria maculans JN3]
gi|312216677|emb|CBX96627.1| predicted protein [Leptosphaeria maculans JN3]
Length = 54
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEA-EDNMNCA 42
+IGIPIKLL+EA GHI+T E T+G+++RGKL+E CA
Sbjct: 4 TIGIPIKLLNEAAGHIVTLEITSGEVYRGKLIEGTRGQYECA 45
>gi|168038469|ref|XP_001771723.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677030|gb|EDQ63506.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTF 50
+P+KLLHE EGH +T E NGD+ RGKL+E+E+N + F
Sbjct: 1 VPLKLLHEGEGHGVTVELKNGDVCRGKLIESENNWTLQLDTANFIF 46
>gi|298709378|emb|CBJ31311.1| Small nuclear ribonucleoprotein-associated protein D3 [Ectocarpus
siliculosus]
Length = 177
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMAD-VTVTFRDGTYYLPAL 60
+PI LLH+AEG IIT E NG++ RG L EAED+MN + D V R T L L
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQL 57
>gi|349804137|gb|AEQ17541.1| putative small nuclear ribonucleoprotein sm d3 [Hymenochirus
curtipes]
Length = 105
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%), Gaps = 1/33 (3%)
Query: 21 ETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
ET G+++R KL+EAEDNMNC M+++TVT+RDG
Sbjct: 1 ETNTGEVYR-KLIEAEDNMNCQMSNITVTYRDG 32
>gi|154414287|ref|XP_001580171.1| Sm protein [Trichomonas vaginalis G3]
gi|121914386|gb|EAY19185.1| Sm protein [Trichomonas vaginalis G3]
Length = 119
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 7 IKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
I +LHEA+G ++T ET G+++RG L +ED MN + DVT T
Sbjct: 12 IAILHEADGFVVTIETKQGEMYRGTLFGSEDTMNVELHDVTYT 54
>gi|161899479|ref|XP_001712973.1| spliceosomal snRNA-associated Sm core protein required for
pre-mRNA splicing [Bigelowiella natans]
gi|75756468|gb|ABA27361.1| spliceosomal snRNA-associated Sm core protein required for
pre-mRNA splicing [Bigelowiella natans]
Length = 141
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALV 61
++GIP+KL+H+AE H I+ + +G L G+L+ +EDN N + V + ++ L
Sbjct: 7 NVGIPLKLIHQAEKHQISVKLKDGKLLIGELMNSEDNWNLCLKKVIIKEKENKSSKSMLY 66
Query: 62 PIAG 65
+ G
Sbjct: 67 FVRG 70
>gi|399949598|gb|AFP65256.1| small nuclear ribonucleoprotein Sm D3 [Chroomonas mesostigmatica
CCMP1168]
Length = 83
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMAD 45
M +P++L+ EA ++T E+ G+ +RGKLV+ E+NMNC + +
Sbjct: 1 MFTSLPLQLIFEARPFVVTIESKMGEKYRGKLVQVENNMNCYLEN 45
>gi|158263375|gb|ABW24416.1| small nuclear ribonucleoprotein [Riftia pachyptila]
Length = 104
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 23/25 (92%)
Query: 29 RGKLVEAEDNMNCAMADVTVTFRDG 53
RGKL+EAEDNMNC M+D+T T+RDG
Sbjct: 1 RGKLLEAEDNMNCQMSDITCTYRDG 25
>gi|330038680|ref|XP_003239668.1| small nuclear ribonucleoprotein Sm D3 [Cryptomonas paramecium]
gi|327206592|gb|AEA38770.1| small nuclear ribonucleoprotein Sm D3 [Cryptomonas paramecium]
Length = 84
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTV 48
M IPI LL E + +I+T ET NG +RG L E NMNC + D V
Sbjct: 1 MKNSIPINLLLETKPYIVTIETRNGTKYRGSLNFIEKNMNCCLKDAIV 48
>gi|71663921|ref|XP_818947.1| small nuclear ribonucleoprotein SmD3 [Trypanosoma cruzi strain CL
Brener]
gi|70884226|gb|EAN97096.1| small nuclear ribonucleoprotein SmD3, putative [Trypanosoma
cruzi]
Length = 115
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+ IP+K+L +A G I+ E +NG+L+ G L E +DNMN + T + G
Sbjct: 3 TFSIPLKVLFDAIGTTISLEVSNGELYTGTLSEVQDNMNVLLISAKKTKKSG 54
>gi|162606428|ref|XP_001713244.1| putative small nuclear ribonucleoprotein Sm D3 [Guillardia theta]
gi|12580710|emb|CAC27028.1| putative small nuclear ribonucleoprotein Sm D3 [Guillardia theta]
Length = 79
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 9 LLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTV 48
+L E++ ++IT E NG ++RGKL+ E+NMNC + + V
Sbjct: 9 ILRESKPYVITIECKNGFIYRGKLIHIEENMNCILKEAFV 48
>gi|167516422|ref|XP_001742552.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779176|gb|EDQ92790.1| predicted protein [Monosiga brevicollis MX1]
Length = 115
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H++ E NG+ + G L + ++ MN M DVT+T +DG +
Sbjct: 2 LPLSLLRAASNHMMLVELKNGETYNGHLSKCDNYMNITMRDVTLTSKDGDRF 53
>gi|300122650|emb|CBK23217.2| unnamed protein product [Blastocystis hominis]
Length = 125
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVP 62
IG+P LL+EAEG +T +G ++RG ++E +DN N M +VT+ T Y ++P
Sbjct: 15 IGMPTLLLYEAEGCTALIQTRDGSIYRGIIMEVQDNWNLNMKNVTMK----TKYSNEIIP 70
Query: 63 IAGMW 67
++
Sbjct: 71 FEMLF 75
>gi|340053110|emb|CCC47397.1| putative small nuclear ribonucleoprotein SmD3 [Trypanosoma vivax
Y486]
Length = 115
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+ +P+K+L++A G +++ E NG ++ G L + EDNMN + T + G
Sbjct: 3 TFSVPLKVLYDAIGTVVSLEVANGSVYTGTLSQLEDNMNVLLTKAQKTSKSG 54
>gi|328862497|gb|EGG11598.1| hypothetical protein MELLADRAFT_31042 [Melampsora larici-populina
98AG31]
Length = 108
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LLH A+G + E NG+ F G L+++++ MN M +V +T DG +
Sbjct: 1 LPLALLHGAQGKPMLVELKNGETFNGHLIQSDNFMNLTMREVYLTSSDGEKF 52
>gi|429965752|gb|ELA47749.1| hypothetical protein VCUG_00710 [Vavraia culicis 'floridensis']
Length = 90
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M + +P+KLL+E E +T E NG GKL++ +D MN + DV +T +G
Sbjct: 1 MKLSVPLKLLYECENFQLTVELDNGVKVTGKLMQMDDLMNLTLDDVVLTEANG 53
>gi|440494060|gb|ELQ76472.1| Small nuclear ribonucleoprotein Sm D3 [Trachipleistophora
hominis]
Length = 90
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M +P+KLL+E E +T E NG GKLV+ +D MN + DV +T +G
Sbjct: 1 MKPSVPLKLLYECENFQLTVELDNGTKATGKLVQVDDLMNLTLDDVVLTEING 53
>gi|328774253|gb|EGF84290.1| hypothetical protein BATDEDRAFT_85018 [Batrachochytrium
dendrobatidis JAM81]
Length = 132
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL++A+GH + E NGD F G LV + MN + +V T DG +
Sbjct: 2 LPLSLLNKAQGHPMLIELKNGDTFNGHLVNCDPYMNVNLREVIRTSADGEKF 53
>gi|323452593|gb|EGB08466.1| hypothetical protein AURANDRAFT_25994 [Aureococcus
anophagefferens]
Length = 139
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E NGD + G+LV A+ MN + +V T RDG +
Sbjct: 2 LPLSLLTTAKGQPMLIELKNGDTYNGRLVSADTWMNVNLEEVICTSRDGDRF 53
>gi|301108373|ref|XP_002903268.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
gi|262097640|gb|EEY55692.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
Length = 79
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NGD + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRF 53
>gi|301108303|ref|XP_002903233.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
gi|262097605|gb|EEY55657.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
Length = 82
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NGD + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRF 53
>gi|148696909|gb|EDL28856.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Mus musculus]
Length = 143
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
S +P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 4 SCSLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 58
>gi|348673931|gb|EGZ13750.1| hypothetical protein PHYSODRAFT_347058 [Phytophthora sojae]
Length = 153
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NGD + G LV + MN + +V T +DG +
Sbjct: 3 SLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRF 55
>gi|324523014|gb|ADY48174.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 166
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G LV + MN + D T RDG +L
Sbjct: 39 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRFL 91
>gi|410921860|ref|XP_003974401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Takifugu rubripes]
Length = 147
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
I +P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 4 IKLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 57
>gi|159107430|ref|XP_001703995.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia lamblia
ATCC 50803]
gi|157432041|gb|EDO76321.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia lamblia
ATCC 50803]
Length = 90
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+I PI+LL EA ++ ET G ++ GKLV E ++ +++ T+T G
Sbjct: 1 MTITAPIQLLFEAIDMCVSVETRTGSIYEGKLVSVEPTLSVTISNCTITHPTG 53
>gi|47217413|emb|CAG00773.1| unnamed protein product [Tetraodon nigroviridis]
Length = 131
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|449017546|dbj|BAM80948.1| Sm protein D3 [Cyanidioschyzon merolae strain 10D]
Length = 170
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTV 48
+P LL EA+ I++ ET NG +RG+L MN ++ VTV
Sbjct: 11 LPRALLREAKNQIVSVETKNGMEYRGRLDNVSSRMNLVLSAVTV 54
>gi|403174347|ref|XP_003333333.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170935|gb|EFP88914.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 248
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LLH A+G + E NG+ F G L++ ++ MN M +V T +G +
Sbjct: 101 LPLALLHGAQGKPMLVELKNGETFNGHLIQCDNFMNLTMREVYQTSANGEQF 152
>gi|307195781|gb|EFN77595.1| U6 snRNA-associated Sm-like protein LSm4 [Harpegnathos saltator]
Length = 138
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 1 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNVNLREVICTSRDGDKF 52
>gi|262401386|gb|ACY66595.1| small nuclear ribonucleoprotein SM D3 (snRNP core protein D3)
(SM-D3)-like protein [Scylla paramamosain]
Length = 101
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 28 FRGKLVEAEDNMNCAMADVTVTFRDG 53
+RGKL+EAEDNMN M TVT+R+G
Sbjct: 1 YRGKLLEAEDNMNVQMEACTVTYRNG 26
>gi|170578381|ref|XP_001894384.1| Probable U6 snRNA-associated Sm-like protein LSm4 [Brugia malayi]
gi|158599053|gb|EDP36777.1| Probable U6 snRNA-associated Sm-like protein LSm4, putative
[Brugia malayi]
Length = 163
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLP 58
+ +P+ LL A+ H + E NG+ + G LV + MN + D T RDG +L
Sbjct: 32 LQLPLSLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLK 87
>gi|355700149|gb|AES01356.1| LSM4-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 153
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 17 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 68
>gi|354473886|ref|XP_003499163.1| PREDICTED: hypothetical protein LOC100769464 [Cricetulus griseus]
Length = 391
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 255 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 306
>gi|345488677|ref|XP_003425963.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Nasonia
vitripennis]
Length = 138
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|270007999|gb|EFA04447.1| hypothetical protein TcasGA2_TC014750 [Tribolium castaneum]
Length = 130
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 14 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 65
>gi|195434128|ref|XP_002065055.1| GK14878 [Drosophila willistoni]
gi|194161140|gb|EDW76041.1| GK14878 [Drosophila willistoni]
Length = 303
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 3656 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 3707
>gi|395513176|ref|XP_003760805.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Sarcophilus
harrisii]
Length = 152
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 15 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 66
>gi|41152340|ref|NP_956990.1| U6 snRNA-associated Sm-like protein LSm4 [Danio rerio]
gi|37589787|gb|AAH59435.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
gi|38328316|gb|AAH62285.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 143
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|209735614|gb|ACI68676.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 150
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|326934546|ref|XP_003213349.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Meleagris gallopavo]
Length = 174
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 38 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 89
>gi|301753917|ref|XP_002912773.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Ailuropoda melanoleuca]
Length = 152
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|119605093|gb|EAW84687.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 163
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+ +P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 22 FAFQLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 77
>gi|432854576|ref|XP_004067969.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Oryzias
latipes]
Length = 144
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|426230288|ref|XP_004009208.1| PREDICTED: uncharacterized protein LOC101110507, partial [Ovis
aries]
Length = 207
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 6 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 57
>gi|226372266|gb|ACO51758.1| U6 snRNA-associated Sm-like protein LSm4 [Rana catesbeiana]
Length = 140
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|147902804|ref|NP_001088454.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|54311207|gb|AAH84779.1| LOC495318 protein [Xenopus laevis]
Length = 138
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|350535801|ref|NP_001232447.1| U6 snRNA-associated Sm-like protein LSm4 [Taeniopygia guttata]
gi|363743848|ref|XP_418245.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Gallus
gallus]
gi|197129949|gb|ACH46447.1| putative LSM4 homolog U6 small nuclear RNA associated
[Taeniopygia guttata]
Length = 138
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|91084013|ref|XP_975325.1| PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA
associated [Tribolium castaneum]
Length = 163
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 14 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 65
>gi|45361593|ref|NP_989371.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|39849973|gb|AAH64199.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
gi|52078460|gb|AAH82491.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 138
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|10720074|sp|Q9QXA5.1|LSM4_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|6692064|emb|CAB65729.1| Lsm4 protein [Mus musculus]
Length = 137
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|449279546|gb|EMC87118.1| U6 snRNA-associated Sm-like protein LSm4, partial [Columba livia]
Length = 138
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|209733716|gb|ACI67727.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 147
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|332376551|gb|AEE63415.1| unknown [Dendroctonus ponderosae]
Length = 135
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|348523129|ref|XP_003449076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Oreochromis niloticus]
Length = 147
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|357619535|gb|EHJ72069.1| hypothetical protein KGM_17625 [Danaus plexippus]
Length = 138
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|427784849|gb|JAA57876.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 142
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|157823641|ref|NP_001099543.1| U6 snRNA-associated Sm-like protein LSm4 [Rattus norvegicus]
gi|159032056|ref|NP_056631.2| U6 snRNA-associated Sm-like protein LSm4 [Mus musculus]
gi|12846677|dbj|BAB27261.1| unnamed protein product [Mus musculus]
gi|20073103|gb|AAH26747.1| Lsm4 protein [Mus musculus]
gi|26354156|dbj|BAC40708.1| unnamed protein product [Mus musculus]
gi|74198684|dbj|BAE39816.1| unnamed protein product [Mus musculus]
gi|74228648|dbj|BAE25390.1| unnamed protein product [Mus musculus]
gi|148696910|gb|EDL28857.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Mus musculus]
gi|149036057|gb|EDL90723.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 138
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|6912486|ref|NP_036453.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Homo sapiens]
gi|78369240|ref|NP_001030513.1| U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|160837874|ref|NP_001104275.1| LSM4 homolog, U6 small nuclear RNA associated [Canis lupus
familiaris]
gi|386780610|ref|NP_001247502.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|296233291|ref|XP_002761949.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Callithrix
jacchus]
gi|297704123|ref|XP_002828970.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pongo abelii]
gi|338718643|ref|XP_001500651.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Equus
caballus]
gi|397493881|ref|XP_003817824.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pan paniscus]
gi|402904782|ref|XP_003915219.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Papio anubis]
gi|410950868|ref|XP_003982124.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Felis catus]
gi|426387786|ref|XP_004060343.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Gorilla gorilla gorilla]
gi|10720082|sp|Q9Y4Z0.1|LSM4_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm4; AltName:
Full=Glycine-rich protein; Short=GRP
gi|109892572|sp|Q3ZBK6.1|LSM4_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|5919149|gb|AAD56228.1|AF182290_1 U6 snRNA-associated Sm-like protein LSm4 [Homo sapiens]
gi|6563244|gb|AAF17216.1|AF117235_1 glycine-rich protein [Homo sapiens]
gi|9623197|gb|AAF90055.1|AF251218_1 LSm4 autoantigen [Homo sapiens]
gi|5262858|emb|CAB45867.1| Lsm4 protein [Homo sapiens]
gi|12653237|gb|AAH00387.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|13177763|gb|AAH03652.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18645159|gb|AAH22198.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|23273864|gb|AAH23665.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|73587230|gb|AAI03244.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|119605092|gb|EAW84686.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|190690627|gb|ACE87088.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|190691985|gb|ACE87767.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|208966682|dbj|BAG73355.1| LSM4 homolog, U6 small nuclear RNA associated [synthetic
construct]
gi|296486080|tpg|DAA28193.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|380784377|gb|AFE64064.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Macaca
mulatta]
gi|383408443|gb|AFH27435.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|410214894|gb|JAA04666.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410249724|gb|JAA12829.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410289766|gb|JAA23483.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410328789|gb|JAA33341.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 139
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|395848095|ref|XP_003796696.1| PREDICTED: uncharacterized protein LOC100963645 [Otolemur
garnettii]
Length = 312
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 175 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 226
>gi|13161882|emb|CAC33027.1| Lsm4 protein [Takifugu rubripes]
Length = 144
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|355755618|gb|EHH59365.1| hypothetical protein EGM_09452, partial [Macaca fascicularis]
Length = 138
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 1 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 52
>gi|348558677|ref|XP_003465143.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Cavia
porcellus]
Length = 139
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|355703322|gb|EHH29813.1| Glycine-rich protein, partial [Macaca mulatta]
gi|440903986|gb|ELR54561.1| U6 snRNA-associated Sm-like protein LSm4, partial [Bos grunniens
mutus]
Length = 139
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|346469961|gb|AEO34825.1| hypothetical protein [Amblyomma maculatum]
Length = 142
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|195051225|ref|XP_001993055.1| GH13613 [Drosophila grimshawi]
gi|193900114|gb|EDV98980.1| GH13613 [Drosophila grimshawi]
Length = 155
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|351701223|gb|EHB04142.1| U6 snRNA-associated Sm-like protein LSm4, partial [Heterocephalus
glaber]
Length = 117
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|387016780|gb|AFJ50509.1| u6 snRNA-associated Sm-like protein LSm4-like [Crotalus
adamanteus]
Length = 139
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|223974607|gb|ACN31491.1| unknown [Zea mays]
Length = 146
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVEPKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|194859892|ref|XP_001969475.1| GG23936 [Drosophila erecta]
gi|190661342|gb|EDV58534.1| GG23936 [Drosophila erecta]
Length = 154
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|417408054|gb|JAA50600.1| Putative small nuclear ribonucleoprotein snrnp, partial [Desmodus
rotundus]
Length = 142
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 5 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 56
>gi|383858764|ref|XP_003704869.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Megachile rotundata]
Length = 158
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+ +P+ LL A+ H + E NG+ + G LV + MN + +V T RDG +
Sbjct: 19 VDLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKF 72
>gi|390362890|ref|XP_003730251.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 151
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 29 LPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRF 80
>gi|324507721|gb|ADY43268.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 130
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G LV + MN + D T RDG +L
Sbjct: 3 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRFL 55
>gi|195578187|ref|XP_002078947.1| GD22262 [Drosophila simulans]
gi|194190956|gb|EDX04532.1| GD22262 [Drosophila simulans]
Length = 154
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|78706862|ref|NP_001027236.1| CG17768, isoform A [Drosophila melanogaster]
gi|320544912|ref|NP_001188778.1| CG17768, isoform B [Drosophila melanogaster]
gi|45445082|gb|AAF52938.3| CG17768, isoform A [Drosophila melanogaster]
gi|201065957|gb|ACH92388.1| FI07244p [Drosophila melanogaster]
gi|318068412|gb|ADV37028.1| CG17768, isoform B [Drosophila melanogaster]
Length = 154
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|344283091|ref|XP_003413306.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Loxodonta africana]
Length = 151
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 14 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 65
>gi|332019235|gb|EGI59745.1| U6 snRNA-associated Sm-like protein LSm4 [Acromyrmex echinatior]
Length = 138
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 1 LPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 52
>gi|307178481|gb|EFN67170.1| U6 snRNA-associated Sm-like protein LSm4 [Camponotus floridanus]
Length = 139
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 LPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 53
>gi|303279759|ref|XP_003059172.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459008|gb|EEH56304.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 129
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVSCDTWMNVHLKEVICTSKDGDRF 53
>gi|449457365|ref|XP_004146419.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 138
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|414876858|tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
Length = 112
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|25012547|gb|AAN71375.1| RE35747p [Drosophila melanogaster]
Length = 154
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|159107444|ref|XP_001704002.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia lamblia
ATCC 50803]
gi|157432048|gb|EDO76328.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia lamblia
ATCC 50803]
Length = 62
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
M+I PI+LL EA ++ ET G ++ GKLV E ++ +++ T+T
Sbjct: 1 MTITAPIQLLFEAIDMCVSVETRTGSIYEGKLVSVEPTLSVTISNCTIT 49
>gi|298715431|emb|CBJ28042.1| Sm-like protein LSm4 [Ectocarpus siliculosus]
Length = 165
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+G + E NGD + G+L + MN + DV T RD ++
Sbjct: 2 LPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFV 54
>gi|297812937|ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
gi|297320189|gb|EFH50611.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|328780963|ref|XP_624908.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Apis
mellifera]
Length = 138
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKF 53
>gi|308158291|gb|EFO61046.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia lamblia
P15]
Length = 90
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPAL 60
M+I PI+LL EA ++ ET G ++ GKLV E ++ +++ T+T G +
Sbjct: 1 MTITAPIQLLFEAIDMRVSVETRAGTIYEGKLVSVEPTLSVTISNCTITHPTGQREIAQT 60
Query: 61 VPIAG 65
V + G
Sbjct: 61 VMLRG 65
>gi|357519603|ref|XP_003630090.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355524112|gb|AET04566.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 161
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|300122633|emb|CBK23201.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A + I E TNG+ + GKLV + MN + D +T + G+ +
Sbjct: 19 LPLSLLRAARDNEILVELTNGETYNGKLVSCDSYMNLVLNDAILTTKTGSRFF 71
>gi|297743868|emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 48 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 99
>gi|350409693|ref|XP_003488818.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Bombus
impatiens]
gi|380028027|ref|XP_003697713.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Apis
florea]
Length = 139
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T RDG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKF 53
>gi|403303582|ref|XP_003942405.1| PREDICTED: uncharacterized protein LOC101034609 [Saimiri
boliviensis boliviensis]
Length = 285
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 148 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 199
>gi|293335959|ref|NP_001170512.1| uncharacterized LOC100384520 [Zea mays]
gi|238005774|gb|ACR33922.1| unknown [Zea mays]
gi|413947013|gb|AFW79662.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|414876859|tpg|DAA53990.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|226491554|ref|NP_001152235.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|195654155|gb|ACG46545.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|195146798|ref|XP_002014371.1| GL19160 [Drosophila persimilis]
gi|194106324|gb|EDW28367.1| GL19160 [Drosophila persimilis]
Length = 151
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 53
>gi|242056887|ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
gi|241929564|gb|EES02709.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
Length = 145
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|255564128|ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus
communis]
gi|223537623|gb|EEF39246.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus
communis]
Length = 147
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|357129770|ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Brachypodium distachyon]
gi|326528247|dbj|BAJ93305.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 142
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|326516310|dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|195655461|gb|ACG47198.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|427778567|gb|JAA54735.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 167
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 6 PIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 28 PLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 78
>gi|146099718|ref|XP_001468724.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|134073092|emb|CAM71812.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
Length = 113
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+ IPIK+L +A ++ E G+++ G + E ++NMN + D T T R G
Sbjct: 1 MAESIPIKVLFDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKDATKTARGG 53
>gi|224064436|ref|XP_002301475.1| predicted protein [Populus trichocarpa]
gi|222843201|gb|EEE80748.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|449529475|ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|449526219|ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|414876860|tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
Length = 172
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|157876267|ref|XP_001686492.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|398022728|ref|XP_003864526.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
gi|68129566|emb|CAJ08109.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|322502761|emb|CBZ37844.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
Length = 113
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+ IPIK+L +A ++ E G+++ G + E ++NMN + D T T R G
Sbjct: 1 MAESIPIKVLFDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKDATKTARGG 53
>gi|340718599|ref|XP_003397752.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like isoform
1 [Bombus terrestris]
Length = 154
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T RDG +
Sbjct: 17 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKF 68
>gi|15241028|ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
gi|332006335|gb|AED93718.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
Length = 129
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|21593495|gb|AAM65462.1| glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|12230258|sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 10; Short=GRP 10
gi|790473|emb|CAA58702.1| unnamed protein product [Nicotiana tabacum]
Length = 146
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|260793240|ref|XP_002591620.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
gi|229276829|gb|EEN47631.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
Length = 126
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G L ++ MN + DV T RDG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLEACDNWMNIKLRDVICTSRDGDRF 53
>gi|356572732|ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 148
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|225450786|ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 149
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|77745469|gb|ABB02633.1| glycine rich protein-like [Solanum tuberosum]
gi|82623401|gb|ABB87115.1| glycine rich protein-like [Solanum tuberosum]
Length = 147
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|390335655|ref|XP_783129.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 161
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 29 LPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRF 80
>gi|313241313|emb|CBY33589.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G LV ++ MN + +V T RDG ++
Sbjct: 2 LPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDGDHF 53
>gi|313236950|emb|CBY12197.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G LV ++ MN + +V T RDG ++
Sbjct: 2 LPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDGDHF 53
>gi|225437330|ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 150
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|449443839|ref|XP_004139683.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 88
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|443711054|gb|ELU05001.1| hypothetical protein CAPTEDRAFT_200433 [Capitella teleta]
Length = 136
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G LV ++ MN M +V T RDG +
Sbjct: 2 LPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINMREVICTSRDGDRF 53
>gi|218187914|gb|EEC70341.1| hypothetical protein OsI_01238 [Oryza sativa Indica Group]
Length = 147
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|115435742|ref|NP_001042629.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|9711887|dbj|BAB07978.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|108792648|dbj|BAE95809.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|113532160|dbj|BAF04543.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|215704752|dbj|BAG94780.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618133|gb|EEE54265.1| hypothetical protein OsJ_01157 [Oryza sativa Japonica Group]
Length = 147
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKF 53
>gi|340383285|ref|XP_003390148.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like, partial
[Amphimedon queenslandica]
Length = 93
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+ +P+ LL A+ + + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 VSLPLSLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGERF 55
>gi|224131146|ref|XP_002321012.1| predicted protein [Populus trichocarpa]
gi|222861785|gb|EEE99327.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|356500280|ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 149
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|357511251|ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|357516335|ref|XP_003628456.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355500929|gb|AES82132.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355522478|gb|AET02932.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 150
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|294463283|gb|ADE77177.1| unknown [Picea sitchensis]
Length = 146
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|255629165|gb|ACU14927.1| unknown [Glycine max]
Length = 148
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|198436639|ref|XP_002128141.1| PREDICTED: similar to GL19160 isoform 1 [Ciona intestinalis]
Length = 127
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G LV ++ MN + +V T RDG ++
Sbjct: 2 LPLSLLKTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDHF 53
>gi|357442545|ref|XP_003591550.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
gi|355480598|gb|AES61801.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
Length = 106
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT--YYLPA 59
P+ LL A+GH + E NG+ + G LV + MN + +V T DG +Y+P
Sbjct: 2 FPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVFCTSNDGDRFWYMPK 58
>gi|281201415|gb|EFA75627.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 157
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL +GH I E NG+ F G LV ++ MN + +V T +D +
Sbjct: 2 LPLSLLRTGQGHQIMVELKNGETFNGYLVNCDNWMNINLKNVIRTSKDSDKF 53
>gi|296089694|emb|CBI39513.3| unnamed protein product [Vitis vinifera]
Length = 162
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 15 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 66
>gi|149571864|ref|XP_001512156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like, partial
[Ornithorhynchus anatinus]
Length = 138
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 1 LPLSLLKTAQNHPYLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKF 52
>gi|401428927|ref|XP_003878946.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495195|emb|CBZ30499.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 113
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+ IPIK+L++A ++ E G+++ G + E ++NMN + + T T R G
Sbjct: 1 MAESIPIKVLYDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKNATKTARGG 53
>gi|402581860|gb|EJW75807.1| small nuclear ribonucleoprotein, partial [Wuchereria bancrofti]
Length = 123
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G LV + MN + D T RDG +L
Sbjct: 1 MPLSLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRFL 53
>gi|195995525|ref|XP_002107631.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588407|gb|EDV28429.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 96
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVNCDNFMNINLREVICTSKDGDRF 53
>gi|38047763|gb|AAR09784.1| similar to Drosophila melanogaster CG17768, partial [Drosophila
yakuba]
Length = 152
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 6 PIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
P+ LL A+ H + E NG+ + G LV + MN + DV T +DG +
Sbjct: 1 PLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRF 51
>gi|405977571|gb|EKC42014.1| UPF0632 protein A [Crassostrea gigas]
Length = 697
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 8 LPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRF 59
>gi|255076339|ref|XP_002501844.1| predicted protein [Micromonas sp. RCC299]
gi|226517108|gb|ACO63102.1| predicted protein [Micromonas sp. RCC299]
Length = 123
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL ++GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTSQGHPMLVELKNGETYNGHLVSCDTWMNVHLREVICTSKDGDRF 53
>gi|156395605|ref|XP_001637201.1| predicted protein [Nematostella vectensis]
gi|156224311|gb|EDO45138.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T RDG +
Sbjct: 3 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSRDGDKF 54
>gi|384489888|gb|EIE81110.1| hypothetical protein RO3G_05815 [Rhizopus delemar RA 99-880]
Length = 129
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LLH A GH + E +G+ F G LV ++ MN + +V T +G +
Sbjct: 2 LPLSLLHTAAGHPMLVELKSGETFNGHLVNCDNWMNLTLREVIQTSPEGDKF 53
>gi|168013104|ref|XP_001759241.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689554|gb|EDQ75925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|321456471|gb|EFX67578.1| hypothetical protein DAPPUDRAFT_218645 [Daphnia pulex]
Length = 135
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T +DG +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRF 53
>gi|340376985|ref|XP_003387011.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Amphimedon queenslandica]
Length = 125
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+ +P+ LL A+ + + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 2 VSLPLSLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGDRF 55
>gi|312838417|gb|ADR01276.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838419|gb|ADR01277.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838421|gb|ADR01278.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838423|gb|ADR01279.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838425|gb|ADR01280.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838427|gb|ADR01281.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838429|gb|ADR01282.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838431|gb|ADR01283.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838433|gb|ADR01284.1| small nuclear ribonucleoprotein D3 [Stenodactylus
leptocosymbotes]
gi|312838435|gb|ADR01285.1| small nuclear ribonucleoprotein D3 [Stenodactylus
leptocosymbotes]
gi|312838437|gb|ADR01286.1| small nuclear ribonucleoprotein D3 [Stenodactylus
leptocosymbotes]
gi|312838439|gb|ADR01287.1| small nuclear ribonucleoprotein D3 [Stenodactylus
leptocosymbotes]
gi|312838441|gb|ADR01288.1| small nuclear ribonucleoprotein D3 [Stenodactylus
leptocosymbotes]
gi|312838443|gb|ADR01289.1| small nuclear ribonucleoprotein D3 [Stenodactylus petrii]
gi|312838445|gb|ADR01290.1| small nuclear ribonucleoprotein D3 [Stenodactylus petrii]
gi|312838447|gb|ADR01291.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838449|gb|ADR01292.1| small nuclear ribonucleoprotein D3 [Stenodactylus doriae]
gi|312838451|gb|ADR01293.1| small nuclear ribonucleoprotein D3 [Stenodactylus petrii]
gi|312838455|gb|ADR01295.1| small nuclear ribonucleoprotein D3 [Stenodactylus sthenodactylus]
gi|312838457|gb|ADR01296.1| small nuclear ribonucleoprotein D3 [Stenodactylus sthenodactylus]
gi|312838459|gb|ADR01297.1| small nuclear ribonucleoprotein D3 [Stenodactylus khobarensis]
Length = 22
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 21 ETTNGDLFRGKLVEAEDNMNC 41
ET G+++RGKL+EAEDNMNC
Sbjct: 1 ETNTGEVYRGKLIEAEDNMNC 21
>gi|47028321|gb|AAT09093.1| U6 snRNA-associated Sm like protein [Bigelowiella natans]
Length = 119
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A GH + E NG+ + G LV ++ MN + V T RDG +
Sbjct: 2 LPLSLLRTAVGHPMLVELRNGETYNGHLVSCDNWMNLLIRGVICTSRDGERF 53
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVP 62
+ +PI LL A+G I E NG+ + G L + + MN + D + DG + A +
Sbjct: 185 VELPINLLENAQGKTIVLELKNGNKYTGTLEKCDRMMNLHVKDSVLIQPDGKKFKVAKII 244
Query: 63 IAGM 66
+ GM
Sbjct: 245 VKGM 248
>gi|392579756|gb|EIW72883.1| hypothetical protein TREMEDRAFT_24586, partial [Tremella
mesenterica DSM 1558]
Length = 104
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+G + E NG F G LVE ++ MN + +V T DG +
Sbjct: 1 LPLTLLNAAQGKPMLVELKNGVTFNGHLVECDNFMNVTLREVYQTSADGERF 52
>gi|452819748|gb|EME26801.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Galdieria
sulphuraria]
Length = 110
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E +GD + G LV + MN + +V T R+G +
Sbjct: 3 LPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRF 54
>gi|320590330|gb|EFX02773.1| bar domain containing protein [Grosmannia clavigera kw1407]
Length = 1158
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV+ + MN + V T DG ++
Sbjct: 366 LPLGLLSAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLKGVVQTSPDGDSFM 418
>gi|449672414|ref|XP_002167952.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Hydra
magnipapillata]
Length = 128
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL ++ H + E NG+ + G LV ++ MN + +V T RDG +
Sbjct: 3 LPLTLLQTSQNHPMLVELKNGETYNGHLVTCDNWMNINLREVICTSRDGDRF 54
>gi|391338956|ref|XP_003743819.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T R+G +
Sbjct: 2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKF 53
>gi|20260282|gb|AAM13039.1| unknown protein [Arabidopsis thaliana]
gi|22136528|gb|AAM91342.1| unknown protein [Arabidopsis thaliana]
Length = 129
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ L A+GH + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLFKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|213403558|ref|XP_002172551.1| small nuclear ribonucleoprotein Sm D3 [Schizosaccharomyces
japonicus yFS275]
gi|212000598|gb|EEB06258.1| small nuclear ribonucleoprotein Sm D3 [Schizosaccharomyces
japonicus yFS275]
Length = 98
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 20/47 (42%)
Query: 7 IKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
IKLLHEA+ AEDNMNC + D++VT RDG
Sbjct: 22 IKLLHEAQ--------------------AEDNMNCQLKDISVTARDG 48
>gi|219124066|ref|XP_002182333.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406294|gb|EEC46234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 135
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY--LPA 59
+P+ LL A G I E GD + G++V + MN + DV T DG ++ LP+
Sbjct: 2 LPLTLLRAANGSPILVELKGGDTYNGRVVNCDTFMNMNLQDVICTSADGEHFSKLPS 58
>gi|12230329|sp|Q9ZRU9.1|LSM4_FAGSY RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 2
gi|3927916|emb|CAA10233.1| glycine-rich protein 2 [Fagus sylvatica]
Length = 148
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E +G+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
>gi|302831786|ref|XP_002947458.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
gi|300267322|gb|EFJ51506.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
Length = 140
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + + MN +++V T +DG +
Sbjct: 2 LPLSLLKTAQRHAVLVELKNGETYNGYLQQCDTWMNLHLSEVICTSKDGQRFF 54
>gi|391339536|ref|XP_003744104.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T R+G +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKF 53
>gi|346325131|gb|EGX94728.1| U6 snRNA-associated Sm-like protein LSM4, putative [Cordyceps
militaris CM01]
Length = 163
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+S+ +P+ LL+ A+GH + E NG+ G LV + MN + V T +G ++
Sbjct: 33 VSLQLPLGLLNAAQGHPMLVELKNGETLNGHLVNCDTWMNLTLTQVVQTSPEGDKFM 89
>gi|452819749|gb|EME26802.1| U6 snRNA-associated Sm-like protein LSm4 isoform 2 [Galdieria
sulphuraria]
Length = 127
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E +GD + G LV + MN + +V T R+G +
Sbjct: 3 LPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRF 54
>gi|253735672|ref|NP_001156694.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239791415|dbj|BAH72178.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRF 53
>gi|242247021|ref|NP_001156271.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239790147|dbj|BAH71652.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRF 53
>gi|118790653|ref|XP_318746.3| AGAP009687-PA [Anopheles gambiae str. PEST]
gi|116118049|gb|EAA14138.4| AGAP009687-PA [Anopheles gambiae str. PEST]
Length = 157
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKF 53
>gi|294932805|ref|XP_002780450.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239890384|gb|EER12245.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 126
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G I E NG+ + G L + MN + D +T +DG +
Sbjct: 3 LPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRF 54
>gi|384254045|gb|EIE27519.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 117
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G +V+ + MN + +V T +DG +
Sbjct: 2 LPLLLLKTAQKHPVLVELKNGETYNGHMVQCDSWMNVHLREVICTSKDGDRF 53
>gi|402079351|gb|EJT74616.1| glycine rich protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 141
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN M +V T +G ++
Sbjct: 2 LPLGLLNAAQGHAMMVELKNGETLNGHLVMCDTWMNLTMKEVVQTSPEGDKFM 54
>gi|328876176|gb|EGG24539.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 162
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL +GH I E NG+ + G LV ++ MN M V T +D +
Sbjct: 2 LPLSLLRTGQGHQIMVELKNGETYNGILVNCDNWMNINMRTVIRTSKDSDKF 53
>gi|157109644|ref|XP_001650762.1| small nuclear ribonucleoprotein sm [Aedes aegypti]
gi|108878946|gb|EAT43171.1| AAEL005355-PA [Aedes aegypti]
Length = 154
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV + MN + +V T +DG +
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKF 53
>gi|17533617|ref|NP_495514.1| Protein LSM-4 [Caenorhabditis elegans]
gi|12230257|sp|Q19952.1|LSM4_CAEEL RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|351065126|emb|CCD66279.1| Protein LSM-4 [Caenorhabditis elegans]
Length = 123
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + MN + DV T +DG +
Sbjct: 3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFF 55
>gi|294866382|ref|XP_002764688.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
gi|239864378|gb|EEQ97405.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
Length = 349
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G I E NG+ + G L + MN + D +T +DG +
Sbjct: 3 LPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRF 54
>gi|72387630|ref|XP_844239.1| small nuclear ribonucleoprotein SmD3 [Trypanosoma brucei TREU927]
gi|62360517|gb|AAX80930.1| small nuclear ribonucleoprotein SmD3, putative [Trypanosoma
brucei]
gi|70800772|gb|AAZ10680.1| small nuclear ribonucleoprotein SmD3, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261327389|emb|CBH10364.1| small nuclear ribonucleoprotein SmD3, putative [Trypanosoma
brucei gambiense DAL972]
Length = 115
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNM 39
G+P+K+L +A G ++ E NG+L+ G L E DNM
Sbjct: 5 GLPLKVLSDAVGTTVSLELKNGELYTGTLSEVVDNM 40
>gi|330798959|ref|XP_003287516.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
gi|325082462|gb|EGC35943.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
Length = 168
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL +GH I E NG+ + G L+ ++ MN + +V T +D +
Sbjct: 2 LPLSLLRTGQGHQIMVELKNGETYNGYLINCDNWMNINLRNVIRTSKDSDKF 53
>gi|66807347|ref|XP_637396.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74853183|sp|Q54KX4.1|LSM4_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|60465817|gb|EAL63891.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 177
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL +GH I E NG+ + G LV ++ MN + +V T +D +
Sbjct: 2 LPLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKF 53
>gi|296415636|ref|XP_002837492.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633364|emb|CAZ81683.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G +
Sbjct: 117 LPLSLLNTAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDKFF 169
>gi|429858964|gb|ELA33765.1| small nuclear ribonucleoprotein sm d3 [Colletotrichum
gloeosporioides Nara gc5]
Length = 93
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 22/52 (42%)
Query: 2 SIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+IGIPIKLL+EA+ DNMN + D+TVT RDG
Sbjct: 4 TIGIPIKLLNEAQ----------------------DNMNVQLKDITVTARDG 33
>gi|342180491|emb|CCC89967.1| putative small nuclear ribonucleoprotein SmD3 [Trypanosoma
congolense IL3000]
Length = 115
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAM 43
IP+K+L++A G ++ E NG+L+ G L E +NM +
Sbjct: 6 IPLKVLYDAVGTTVSLELKNGELYTGTLSELVENMGVVL 44
>gi|294881583|ref|XP_002769420.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239872829|gb|EER02138.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 137
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G I E NG+ + G L + MN + D +T +DG +
Sbjct: 3 LPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRF 54
>gi|326432761|gb|EGD78331.1| hypothetical protein PTSG_09397 [Salpingoeca sp. ATCC 50818]
Length = 115
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ L+ A H + E NG+ + G LV + MN + VT+T +DG +
Sbjct: 2 LPLSLIRAAVNHPMLVELKNGESYNGHLVNCDHYMNIILRGVTLTSKDGDRF 53
>gi|312838453|gb|ADR01294.1| small nuclear ribonucleoprotein D3 [Stenodactylus arabicus]
Length = 22
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 21 ETTNGDLFRGKLVEAEDNMNCA 42
ET G+++RGKL+E EDNMNC
Sbjct: 1 ETNTGEVYRGKLIEVEDNMNCQ 22
>gi|367022520|ref|XP_003660545.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
gi|347007812|gb|AEO55300.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
Length = 128
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV+ + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKFM 54
>gi|340960256|gb|EGS21437.1| hypothetical protein CTHT_0032950 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 769
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV+ + MN + +V T +G ++
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKFM 54
>gi|315051216|ref|XP_003174982.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
gi|311340297|gb|EFQ99499.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
Length = 124
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 5 LPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFF 57
>gi|213406934|ref|XP_002174238.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
gi|212002285|gb|EEB07945.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
Length = 119
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+G I E NG+ F G L + ++ MN + +V T +G +
Sbjct: 2 LPLTLLNAAQGRPILVELKNGETFNGHLEKCDNYMNLTLQEVIQTMPEGDKFF 54
>gi|361127598|gb|EHK99561.1| putative U6 snRNA-associated Sm-like protein LSm4 [Glarea
lozoyensis 74030]
Length = 115
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGT--YYLPAL 60
+P+ LL A+GH + E NG+ G LV + MN + +V T DG Y LP +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVTCDTWMNLTLKEVVQTSPDGDKFYRLPEV 59
>gi|12834762|dbj|BAB23033.1| unnamed protein product [Mus musculus]
Length = 138
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSLDGDKF 53
>gi|58265314|ref|XP_569813.1| glycine rich protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226045|gb|AAW42506.1| glycine rich protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 117
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E NG F G LVE + MN + +V T DG +
Sbjct: 2 LPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERF 53
>gi|253746256|gb|EET01663.1| Small nuclear ribonucleoprotein Sm D3, putative [Giardia
intestinalis ATCC 50581]
Length = 90
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M++ P++LL EA ++ E+ +G ++ GKL E ++ ++D T+T G
Sbjct: 1 MTVTAPVQLLFEAIDMRVSVESRSGIIYEGKLASVEPTLSVIISDCTITHPTG 53
>gi|296812049|ref|XP_002846362.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841618|gb|EEQ31280.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 126
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 7 ALPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFF 60
>gi|341899817|gb|EGT55752.1| CBN-LSM-4 protein [Caenorhabditis brenneri]
Length = 123
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + MN + DV T +DG +
Sbjct: 3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFF 55
>gi|452986281|gb|EME86037.1| hypothetical protein MYCFIDRAFT_130274, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 126
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LLH A+GH + E G+ G LV + MN + +V T +G +
Sbjct: 2 LPLGLLHAAQGHPMLVELKTGETLNGHLVSCDTYMNLTLKEVVQTSPEGDKFF 54
>gi|268562665|ref|XP_002646730.1| C. briggsae CBR-LSM-4 protein [Caenorhabditis briggsae]
Length = 124
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + MN + DV T +DG +
Sbjct: 3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFF 55
>gi|308503320|ref|XP_003113844.1| CRE-LSM-4 protein [Caenorhabditis remanei]
gi|308263803|gb|EFP07756.1| CRE-LSM-4 protein [Caenorhabditis remanei]
Length = 123
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + MN + DV T +DG +
Sbjct: 3 LPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFF 55
>gi|327349106|gb|EGE77963.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 167
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 3 IGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
I +P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 43 IQLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFF 97
>gi|119605095|gb|EAW84689.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_d [Homo sapiens]
Length = 159
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
+P+ LL A+ H + E NG+ + G LV ++ MN + +V T R G
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRVG 50
>gi|321254335|ref|XP_003193040.1| hypothetical protein CGB_C7440C [Cryptococcus gattii WM276]
gi|317459509|gb|ADV21253.1| hypothetical protein CNBC2050 [Cryptococcus gattii WM276]
Length = 141
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E NG F G LVE + MN + +V T DG +
Sbjct: 2 LPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERF 53
>gi|154345502|ref|XP_001568688.1| putative small nuclear ribonucleaoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066030|emb|CAM43815.1| putative small nuclear ribonucleaoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 141
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNM-NCAMADVTVTFRDGTYYLPALVPI 63
IP ++ EA +T ET GDL++GKL + + + N + DV +D TY V +
Sbjct: 11 IPSSVVFEALHLRVTVETVEGDLYKGKLADFDVSRGNIELVDVRHQAKDSTYRFYERVTV 70
Query: 64 AG 65
G
Sbjct: 71 RG 72
>gi|134109199|ref|XP_776714.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259394|gb|EAL22067.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 147
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+G + E NG F G LVE + MN + +V T DG +
Sbjct: 2 LPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERF 53
>gi|19113071|ref|NP_596279.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12230213|sp|O14352.1|LSM4_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|2276355|emb|CAB10801.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe]
Length = 121
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ +G I E NG+ F G L ++ MN + +V T DG +
Sbjct: 2 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFF 54
>gi|302881905|ref|XP_003039863.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
gi|256720730|gb|EEU34150.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
Length = 125
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLREVVQTSPEGDKFV 54
>gi|224008695|ref|XP_002293306.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970706|gb|EED89042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 19 TCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYLPALVPIAGMWNGTSGLRW 75
T + NG+++RG L+ AED MN +++V T R+G V + G SG+R+
Sbjct: 87 TQQMKNGEIYRGLLLNAEDTMNMTLSEVVRTARNGQVSKLPTVYLRG-----SGVRF 138
>gi|46121885|ref|XP_385496.1| hypothetical protein FG05320.1 [Gibberella zeae PH-1]
Length = 154
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFV 54
>gi|320035592|gb|EFW17533.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392868800|gb|EAS34594.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 125
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ ++GH + E NG+ G LV + MN + +V T +G +
Sbjct: 2 LPLGLLNASQGHPMLVELKNGETLNGHLVNCDSWMNLTLKEVVQTSPEGDRFF 54
>gi|209877859|ref|XP_002140371.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209555977|gb|EEA06022.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 112
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ ++ A H I E NG+ + G L+ + MN + +V T +DG +
Sbjct: 3 LPLSVIRSANKHSIMVELKNGETYSGMLIGVDGFMNLVLNNVISTSKDGQRFF 55
>gi|342870013|gb|EGU73372.1| hypothetical protein FOXB_16133 [Fusarium oxysporum Fo5176]
Length = 127
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFV 54
>gi|307107546|gb|EFN55788.1| hypothetical protein CHLNCDRAFT_22901 [Chlorella variabilis]
Length = 132
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A H + E NG+ + G +V+ + MN + +V T +DG +
Sbjct: 2 LPLVLLKTAAAHPVLIELKNGETYNGHMVQCDTWMNIHLREVICTSKDGDRF 53
>gi|303315215|ref|XP_003067615.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107285|gb|EER25470.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 144
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ ++GH + E NG+ G LV + MN + +V T +G +
Sbjct: 21 LPLGLLNASQGHPMLVELKNGETLNGHLVNCDSWMNLTLKEVVQTSPEGDRFF 73
>gi|327304028|ref|XP_003236706.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462048|gb|EGD87501.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 121
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFF 54
>gi|242207126|ref|XP_002469417.1| predicted protein [Postia placenta Mad-698-R]
gi|220731446|gb|EED85290.1| predicted protein [Postia placenta Mad-698-R]
Length = 106
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRF 53
>gi|242809941|ref|XP_002485479.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716104|gb|EED15526.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 118
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEGDRFF 54
>gi|390597253|gb|EIN06653.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 130
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G L+ ++ MN + +V T DG +
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLINCDNFMNITLREVYQTSADGERF 53
>gi|389743937|gb|EIM85121.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 130
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGENFNGHLVNCDNFMNITLREVYQTSADGERF 53
>gi|326470583|gb|EGD94592.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS
112818]
gi|326484638|gb|EGE08648.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 121
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFF 54
>gi|242212742|ref|XP_002472203.1| predicted protein [Postia placenta Mad-698-R]
gi|220728761|gb|EED82649.1| predicted protein [Postia placenta Mad-698-R]
Length = 96
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRF 53
>gi|409080918|gb|EKM81278.1| hypothetical protein AGABI1DRAFT_112946 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197836|gb|EKV47763.1| hypothetical protein AGABI2DRAFT_192916 [Agaricus bisporus var.
bisporus H97]
Length = 131
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADGDRF 53
>gi|399218474|emb|CCF75361.1| unnamed protein product [Babesia microti strain RI]
Length = 122
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ G L + MN M +V T R+G +
Sbjct: 3 LPLTLLRTAQGHPMLVELKNGETCSGILTTCDGFMNLHMRNVVRTSREGDKF 54
>gi|358382645|gb|EHK20316.1| hypothetical protein TRIVIDRAFT_68894 [Trichoderma virens Gv29-8]
Length = 129
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFM 54
>gi|240275971|gb|EER39484.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325093332|gb|EGC46642.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 124
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLAAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFF 54
>gi|255946281|ref|XP_002563908.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588643|emb|CAP86759.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 121
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFF 54
>gi|154336783|ref|XP_001564627.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061662|emb|CAM38693.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 113
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 1 MSIGIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDG 53
M+ IP+K+L +A ++ E G+++ G + E ++NMN + + T T R G
Sbjct: 1 MAESIPMKVLFDALHLKVSIEVATGEVYHGIVEELQNNMNVLLKNATKTTRGG 53
>gi|425765914|gb|EKV04555.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum PHI26]
gi|425779249|gb|EKV17325.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum Pd1]
Length = 121
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFF 54
>gi|358394136|gb|EHK43537.1| hypothetical protein TRIATDRAFT_266952 [Trichoderma atroviride
IMI 206040]
Length = 130
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFM 54
>gi|261195536|ref|XP_002624172.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239588044|gb|EEQ70687.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239610465|gb|EEQ87452.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 124
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFF 54
>gi|408393268|gb|EKJ72533.1| hypothetical protein FPSE_07170 [Fusarium pseudograminearum
CS3096]
Length = 139
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 17 LPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFV 69
>gi|225563373|gb|EEH11652.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 124
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFF 54
>gi|154281997|ref|XP_001541811.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
gi|150411990|gb|EDN07378.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
Length = 124
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFF 54
>gi|212537193|ref|XP_002148752.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
gi|210068494|gb|EEA22585.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
Length = 170
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 54 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEGDRFF 106
>gi|340517649|gb|EGR47892.1| predicted protein [Trichoderma reesei QM6a]
Length = 152
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFM 54
>gi|295674033|ref|XP_002797562.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280212|gb|EEH35778.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 124
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEGDRFF 54
>gi|322695394|gb|EFY87203.1| small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 106
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+P+ LL+ A+GH + E NG+ G LV+ + MN + +V T
Sbjct: 2 LPLSLLNAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQT 46
>gi|225684632|gb|EEH22916.1| U6 snRNP-associated protein Lsm4 [Paracoccidioides brasiliensis
Pb03]
gi|226286829|gb|EEH42342.1| small nuclear ribonucleoprotein [Paracoccidioides brasiliensis
Pb18]
Length = 124
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV ++ MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEGDRFF 54
>gi|378734306|gb|EHY60765.1| hypothetical protein HMPREF1120_08709 [Exophiala dermatitidis
NIH/UT8656]
Length = 135
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E NG+ G LV + MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDRF 53
>gi|401419814|ref|XP_003874396.1| putative small nuclear ribonucleaoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490632|emb|CBZ25894.1| putative small nuclear ribonucleaoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 141
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNM-NCAMADVTVTFRDGTY 55
IP L+ EA +T ET +GDL++G L + + N + DV +D TY
Sbjct: 11 IPSSLVFEALNSRVTVETVDGDLYKGTLAAFDVSRGNIELVDVRHQAKDSTY 62
>gi|392560868|gb|EIW54050.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 161
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 4 GIPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
G+P+ LL+ A+ + E NG+ F G LV ++ MN + + T +G +
Sbjct: 31 GLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREAYQTSAEGDRF 83
>gi|449300793|gb|EMC96805.1| hypothetical protein BAUCODRAFT_122769 [Baudoinia compniacensis
UAMH 10762]
Length = 125
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV + MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTYMNLTLKEVVQTSPEGDKFF 54
>gi|159476634|ref|XP_001696416.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
gi|158282641|gb|EDP08393.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
Length = 134
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+ H + E NG+ + G L + MN +++V T +DG +
Sbjct: 2 LPLSLLKTAQRHGVLVELKNGETYNGYLQHCDTWMNLHLSEVICTSKDGQRFF 54
>gi|156846025|ref|XP_001645901.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156116571|gb|EDO18043.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 193
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADV 46
+P+ LL A+G IT E NG+ +G L ++ MN ++DV
Sbjct: 2 LPLYLLTNAKGQKITIELKNGETIKGVLTNVDNWMNLTLSDV 43
>gi|392591224|gb|EIW80552.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 127
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADGDRF 53
>gi|367045678|ref|XP_003653219.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
gi|347000481|gb|AEO66883.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
Length = 127
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDRFM 54
>gi|380477058|emb|CCF44358.1| small nuclear ribonucleoprotein [Colletotrichum higginsianum]
Length = 170
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 41 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFV 93
>gi|310795553|gb|EFQ31014.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 128
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFV 54
>gi|156034609|ref|XP_001585723.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980]
gi|154698643|gb|EDN98381.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 122
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E +G+ G LV + MN + +V T DG +
Sbjct: 3 LPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKF 54
>gi|347837957|emb|CCD52529.1| hypothetical protein [Botryotinia fuckeliana]
Length = 122
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+GH + E +G+ G LV + MN + +V T DG +
Sbjct: 3 LPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKF 54
>gi|398390838|ref|XP_003848879.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
gi|339468755|gb|EGP83855.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
Length = 129
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E G+ G LV + MN + +V T DG +
Sbjct: 2 LPLGLLTAAQGHPMLVELKTGETLNGHLVSCDTYMNIMLKEVVQTSPDGDKFF 54
>gi|440638708|gb|ELR08627.1| hypothetical protein GMDG_03318 [Geomyces destructans 20631-21]
Length = 124
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL A+GH + E NG+ G LV + MN + +V T +G +
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDKFF 54
>gi|345560998|gb|EGX44114.1| hypothetical protein AOL_s00210g95 [Arthrobotrys oligospora ATCC
24927]
Length = 145
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL +GH + E NG+ G LV + MN + +V T DG +
Sbjct: 2 LPLTLLTTVQGHPLLVELKNGETLNGHLVSCDTWMNLTLKEVIQTSPDGETF 53
>gi|302681117|ref|XP_003030240.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
gi|300103931|gb|EFI95337.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
Length = 129
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL A+ + E NG+ F G LV ++ MN + +V T DG +
Sbjct: 2 LPLSLLTAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDKF 53
>gi|116196218|ref|XP_001223921.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
gi|88180620|gb|EAQ88088.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
Length = 127
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYYL 57
+P+ LL+ A+GH + E NG+ G LV + MN + +V T +G ++
Sbjct: 2 LPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDKFV 54
>gi|395328270|gb|EJF60663.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 132
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G LV ++ MN + +V T +G +
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDKF 53
>gi|302814278|ref|XP_002988823.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
gi|300143394|gb|EFJ10085.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
Length = 180
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVT 49
+P+ LL A GH + E NG+ + G LV + MN + +V T
Sbjct: 2 LPLSLLKTAHGHPMLVELKNGETYNGHLVSCDSWMNIHLREVICT 46
>gi|145347482|ref|XP_001418193.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578422|gb|ABO96486.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 115
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL + GH + E NG+ + G L + MN + +V T +DG +
Sbjct: 2 LPLTLLKTSCGHPMLVELKNGETYNGTLASCDTWMNVHLKEVICTSKDGDRF 53
>gi|393239356|gb|EJD46888.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 5 IPIKLLHEAEGHIITCETTNGDLFRGKLVEAEDNMNCAMADVTVTFRDGTYY 56
+P+ LL+ A+ + E NG+ F G LV ++ MN + +V T +G +
Sbjct: 2 LPLSLLNAAQSKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRF 53
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,337,780,162
Number of Sequences: 23463169
Number of extensions: 45599004
Number of successful extensions: 91108
Number of sequences better than 100.0: 607
Number of HSP's better than 100.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 90487
Number of HSP's gapped (non-prelim): 612
length of query: 79
length of database: 8,064,228,071
effective HSP length: 50
effective length of query: 29
effective length of database: 6,891,069,621
effective search space: 199841019009
effective search space used: 199841019009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)