BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14197
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VZI3|UN112_DROME Unc-112-related protein OS=Drosophila melanogaster GN=Fit1 PE=1
SV=1
Length = 708
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 145/178 (81%)
Query: 1 MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIR 60
MQKPA ++ + DY+S + ++KL SK QRILEAHANV+ L L +AK+ YI+
Sbjct: 530 MQKPAQGAPLTVNPRSVEPMDYLSPKMMRKLSSKAVQRILEAHANVRQLSLMDAKMKYIQ 589
Query: 61 AWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWE 120
AWQSLPD+G+TLF+IK GHKKEELLGV +R+MRM+L++GDH++TWRY+T+KAWNVNW
Sbjct: 590 AWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMKAWNVNWG 649
Query: 121 IKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW 178
IK MM+QL D N +F QSADCKVVHEFIGGYIF+SMRSK+ NQTLNE++FHKLTGGW
Sbjct: 650 IKCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMFHKLTGGW 707
>sp|Q96AC1|FERM2_HUMAN Fermitin family homolog 2 OS=Homo sapiens GN=FERMT2 PE=1 SV=1
Length = 680
Score = 199 bits (507), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
Query: 1 MQKPAPTPAISPASL--DICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLS 57
MQ P P + P + DI E VS RY+KK ++K ++ RILEAH NV + L EAK+
Sbjct: 498 MQHLNPDPQLIPEQITTDITPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMR 557
Query: 58 YIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNV 117
+I+AWQSLP++G+T F+ + G KKEEL+G+ +RL+RM+ S+GD ++TWR+ +K WNV
Sbjct: 558 FIQAWQSLPEFGITHFIARFQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNV 617
Query: 118 NWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTG 176
NWEIK + ++ D F C DCKVVHEFIGGYIFLS R+KD N++L+E++F+KLT
Sbjct: 618 NWEIKMVTVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTS 677
Query: 177 GW 178
GW
Sbjct: 678 GW 679
>sp|Q8CIB5|FERM2_MOUSE Fermitin family homolog 2 OS=Mus musculus GN=Fermt2 PE=1 SV=1
Length = 680
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
Query: 1 MQKPAPTPAISPASL--DICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLS 57
MQ P P + P + D+ E VS RY+KK +SK ++ RILEAH NV + L EAK+
Sbjct: 498 MQHLNPDPQLIPDQITTDVNPECLVSPRYLKKYKSKQITARILEAHQNVAQMSLIEAKMR 557
Query: 58 YIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNV 117
+I+AWQSLP++G+T F+ + G K+EEL+G+ +RL+RM+ S+GD ++TWR+ +K WNV
Sbjct: 558 FIQAWQSLPEFGITHFIARFQGGKREELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNV 617
Query: 118 NWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTG 176
NWEIK + ++ D F C DCKVVHEFIGGYIFLS R+KD N++L+E++F+KLT
Sbjct: 618 NWEIKMVTVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTS 677
Query: 177 GW 178
GW
Sbjct: 678 GW 679
>sp|Q18685|UN112_CAEEL Protein unc-112 OS=Caenorhabditis elegans GN=unc-112 PE=1 SV=1
Length = 720
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 125/165 (75%), Gaps = 2/165 (1%)
Query: 16 DICAEDYVSSRYIKKLRSK--LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLF 73
D ++Y+SS+Y+++ RSK + QR+ +AH NV+ L TEAKL YIRAWQ+LP++G+ F
Sbjct: 555 DFNVDEYISSKYVRRARSKQQIQQRVSDAHGNVRQLTATEAKLQYIRAWQALPEHGIHYF 614
Query: 74 VIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNF 133
+++ +K EL+ V +RL ++ + +G+ ++TWR+ +K W+VNWEI+H+ +Q D +
Sbjct: 615 IVRFRNARKAELVAVAVNRLAKLNMDNGESLKTWRFANMKKWHVNWEIRHLKIQFEDEDI 674
Query: 134 IFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW 178
F+ SADCKVVHEFIGGYIFLSMRSK+ +Q L+E+LFHKLTGGW
Sbjct: 675 EFKPLSADCKVVHEFIGGYIFLSMRSKEHSQNLDEELFHKLTGGW 719
>sp|Q5R8M5|FERM1_PONAB Fermitin family homolog 1 OS=Pongo abelii GN=FERMT1 PE=2 SV=1
Length = 677
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 5 APTPAISPASLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQ 63
A A SP ++D+ E +VS R KK +SK L+ RILEAH NV + L EAKL +I+AWQ
Sbjct: 501 ASQVASSPENMDMNPECFVSPRCAKKHKSKQLAARILEAHQNVAQMPLVEAKLRFIQAWQ 560
Query: 64 SLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKH 123
SLP++GLT ++++ G KK+++LGV+ +RL++++ ++G V TWR+ +K WNV+WE +
Sbjct: 561 SLPEFGLTYYLVRFKGSKKDDILGVSYNRLIKIDAATGIPVTTWRFTNIKQWNVSWETRQ 620
Query: 124 MMLQLTDGNFI-FECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
++++ F F C SADCK+VHE+IGGYIFLS RSKD N+TL+EDLFHKLTGG
Sbjct: 621 VVIEFDQNVFTAFTCLSADCKIVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGG 675
>sp|Q9BQL6|FERM1_HUMAN Fermitin family homolog 1 OS=Homo sapiens GN=FERMT1 PE=1 SV=1
Length = 677
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 5 APTPAISPASLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQ 63
A A S ++D+ E +VS R K+ +SK L+ RILEAH NV + L EAKL +I+AWQ
Sbjct: 501 ASQVASSLENMDMNPECFVSPRCAKRHKSKQLAARILEAHQNVAQMPLVEAKLRFIQAWQ 560
Query: 64 SLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKH 123
SLP++GLT ++++ G KK+++LGV+ +RL++++ ++G V TWR+ +K WNVNWE +
Sbjct: 561 SLPEFGLTYYLVRFKGSKKDDILGVSYNRLIKIDAATGIPVTTWRFTNIKQWNVNWETRQ 620
Query: 124 MMLQLTDGNFI-FECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
++++ F F C SADCK+VHE+IGGYIFLS RSKD N+TL+EDLFHKLTGG
Sbjct: 621 VVIEFDQNVFTAFTCLSADCKIVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGG 675
>sp|P59113|FERM1_MOUSE Fermitin family homolog 1 OS=Mus musculus GN=Fermt1 PE=1 SV=4
Length = 677
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 5 APTPAISPASLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQ 63
+P A S ++D+ E VS KK +SK L+ RILEAH NV + L EAKL +I+AWQ
Sbjct: 501 SPLVASSLENMDMNPECLVSPCCAKKHKSKQLAARILEAHHNVAQMPLVEAKLQFIQAWQ 560
Query: 64 SLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKH 123
SLP++GLT ++++ G KK+++LGV +RL+R++ +G V TWR+ +K WNVNWEI+
Sbjct: 561 SLPEFGLTYYLVRFKGSKKDDILGVAYNRLIRIDAVTGIPVTTWRFANMKQWNVNWEIRQ 620
Query: 124 MMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
+ ++ + F C SADCK+VHE+IGGYIFLS RSKD N+TL+EDLFHKLTGG
Sbjct: 621 VAIEFDQNVSIAFTCLSADCKIVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGG 675
>sp|Q8K1B8|URP2_MOUSE Fermitin family homolog 3 OS=Mus musculus GN=Fermt3 PE=1 SV=1
Length = 665
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 123/175 (70%), Gaps = 9/175 (5%)
Query: 5 APTPAISPASLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQ 63
AP ++P L V+ R+ +K ++K L+ RILEAH NV L LTEA+L +I+AWQ
Sbjct: 494 APAEGLNPYGL-------VAPRFQRKFKAKQLTPRILEAHQNVAQLSLTEAQLRFIQAWQ 546
Query: 64 SLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKH 123
SLPD+G++ +++ G +K+E+LG+ +RL+R++L+ GD V+TWR+ ++ WNVNW+I+
Sbjct: 547 SLPDFGISYVMVRFKGSRKDEILGIANNRLIRIDLAVGDVVKTWRFSNMRQWNVNWDIRQ 606
Query: 124 MMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
+ ++ + N F C SA C++VHE+IGGYIFLS R + + L+EDLF +LTGG
Sbjct: 607 VAIEFDEHINVAFSCVSASCRIVHEYIGGYIFLSTRERARGEELDEDLFLQLTGG 661
>sp|Q32LP0|URP2_BOVIN Fermitin family homolog 3 OS=Bos taurus GN=FERMT3 PE=2 SV=1
Length = 665
Score = 173 bits (438), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 117/157 (74%), Gaps = 2/157 (1%)
Query: 23 VSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHK 81
V+ R+ +K ++K L+ RILEAH NV L L+EA+L +I+AWQSLPD+G++ V++ G +
Sbjct: 505 VAPRFQRKFKAKQLTPRILEAHQNVAQLSLSEAQLRFIQAWQSLPDFGISYVVVRFKGSR 564
Query: 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSA 140
K+E+LG+ +RL+R++LS GD V+TWR+ ++ WNVNW+I+ + ++ + N F C SA
Sbjct: 565 KDEILGIANNRLIRIDLSVGDVVKTWRFSNMRQWNVNWDIRQVAIEFDEHINVAFSCVSA 624
Query: 141 DCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
C++VHE+IGGYIFLS R + + L+EDLF +LTGG
Sbjct: 625 SCRIVHEYIGGYIFLSTRERARGEELDEDLFLQLTGG 661
>sp|Q86UX7|URP2_HUMAN Fermitin family homolog 3 OS=Homo sapiens GN=FERMT3 PE=1 SV=1
Length = 667
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 121/177 (68%), Gaps = 7/177 (3%)
Query: 8 PAISPASLDICAEDY-----VSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRA 61
P P D AE V+ R+ +K ++K L+ RILEAH NV L L EA+L +I+A
Sbjct: 487 PGNHPHGPDASAEGLNPYGLVAPRFQRKFKAKQLTPRILEAHQNVAQLSLAEAQLRFIQA 546
Query: 62 WQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEI 121
WQSLPD+G++ +++ G +K+E+LG+ +RL+R++L+ GD V+TWR+ ++ WNVNW+I
Sbjct: 547 WQSLPDFGISYVMVRFKGSRKDEILGIANNRLIRIDLAVGDVVKTWRFSNMRQWNVNWDI 606
Query: 122 KHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
+ + ++ + N F C SA C++VHE+IGGYIFLS R + + L+EDLF +LTGG
Sbjct: 607 RQVAIEFDEHINVAFSCVSASCRIVHEYIGGYIFLSTRERARGEELDEDLFLQLTGG 663
>sp|Q9Y490|TLN1_HUMAN Talin-1 OS=Homo sapiens GN=TLN1 PE=1 SV=3
Length = 2541
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 20 EDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG 79
+D++ Y+K+ K ++I +AH N + EAK+ Y++ +SL YG++ F++K
Sbjct: 263 KDFLPKEYVKQ---KGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKM 319
Query: 80 HKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTD-GNFI 134
K + LLG+T +MR++ + + ++ W +K W + K L D +
Sbjct: 320 KGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAAS--PKSFTLDFGDYQDGY 377
Query: 135 FECQSADCKVVHEFIGGYIFLSMRSKDA 162
+ Q+ + + + + I GYI + ++ K +
Sbjct: 378 YSVQTTEGEQIAQLIAGYIDIILKKKKS 405
>sp|P26039|TLN1_MOUSE Talin-1 OS=Mus musculus GN=Tln1 PE=1 SV=2
Length = 2541
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 20 EDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG 79
+D++ Y+K+ K ++I +AH N + EAK+ Y++ +SL YG++ F++K
Sbjct: 263 KDFLPKEYVKQ---KGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKM 319
Query: 80 HKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTD-GNFI 134
K + LLG+T +MR++ + + ++ W +K W + K L D +
Sbjct: 320 KGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS--PKSFTLDFGDYQDGY 377
Query: 135 FECQSADCKVVHEFIGGYIFLSMRSKDA 162
+ Q+ + + + + I GYI + ++ K +
Sbjct: 378 YSVQTTEGEQIAQLIAGYIDIILKKKKS 405
>sp|P54939|TLN1_CHICK Talin-1 OS=Gallus gallus GN=TLN1 PE=1 SV=2
Length = 2541
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 12 PASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLT 71
P L++ +D++ YIK+ K ++I AH N ++ EAK+ Y++ +SL YG++
Sbjct: 257 PGFLEL--KDFLPKEYIKQ---KGERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTYGVS 311
Query: 72 LFVIKPMGHKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQ 127
F++K K + LLG+T +MR++ + + ++ W +K W + K L
Sbjct: 312 FFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS--PKSFTLD 369
Query: 128 LTD-GNFIFECQSADCKVVHEFIGGYIFLSMRSKDA 162
D + + Q+ + + + + I GYI + ++ K +
Sbjct: 370 FGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKS 405
>sp|Q9Y4G6|TLN2_HUMAN Talin-2 OS=Homo sapiens GN=TLN2 PE=1 SV=4
Length = 2542
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 12 PASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLT 71
P LD+ ++++ YIK+ ++ +RI + H N ++ EAK+ Y++ +SL YG++
Sbjct: 259 PGFLDL--KEFLPKEYIKQRGAE--KRIFQEHKNCGEMSEIEAKVKYVKLARSLRTYGVS 314
Query: 72 LFVIKPMGHKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQ 127
F++K K + LLG+T +MR++ + + ++ W TVK W + K L
Sbjct: 315 FFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVLQEWPLTTVKRWAASP--KSFTLD 372
Query: 128 LTD-GNFIFECQSADCKVVHEFIGGYIFLSMRSK 160
+ + Q+ + + + + I GYI + ++ K
Sbjct: 373 FGEYQESYYSVQTTEGEQISQLIAGYIDIILKKK 406
>sp|Q71LX4|TLN2_MOUSE Talin-2 OS=Mus musculus GN=Tln2 PE=1 SV=3
Length = 2375
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 12 PASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLT 71
P LD+ ++++ YIK+ ++ +RI + H N ++ EAK+ Y++ +SL YG++
Sbjct: 259 PGFLDL--KEFLPKEYIKQRGAE--KRIFQEHKNCGEMSEIEAKVKYVKLARSLRTYGVS 314
Query: 72 LFVIKPMGHKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQ 127
F++K K + LLG+T +MR++ + + ++ W TVK W + K L
Sbjct: 315 FFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVLQEWPLTTVKRWAASP--KSFTLD 372
Query: 128 LTD-GNFIFECQSADCKVVHEFIGGYIFLSMRSK 160
+ + Q+ + + + + I GYI + ++ K
Sbjct: 373 FGEYQESYYSVQTTEGEQISQLIAGYIDIILKKK 406
>sp|P0CE94|TALA_DICDI Talin-A OS=Dictyostelium discoideum GN=talA PE=3 SV=1
Length = 1279
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 27/155 (17%)
Query: 31 LRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIK--PMGHKK--EEL 85
L+SK + + I + H + + AK Y++ +SL YG+T F +K G KK + +
Sbjct: 232 LKSKGVEKDIFKEHKKLVSMTEVNAKYRYVQLCRSLKTYGMTSFDVKIREYGKKKMVDHI 291
Query: 86 LGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFE--------- 136
LG+T +++ M + + + T +K W TD +F +
Sbjct: 292 LGITREQMLLMLTETKEVIMTHPLKHIKRWAA-----------TDKSFTLDFGDHETEYL 340
Query: 137 -CQSADCKVVHEFIGGYIFLSMRS-KDANQTLNED 169
Q+ + + + + IGGYI + M++ KD+++ + ++
Sbjct: 341 ILQTPNPEQISQLIGGYIEIIMKARKDSSKVIEKE 375
>sp|P0CE95|TALA1_DICDI Talin-A OS=Dictyostelium discoideum GN=talA PE=1 SV=1
Length = 2492
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 27/155 (17%)
Query: 31 LRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIK--PMGHKK--EEL 85
L+SK + + I + H + + AK Y++ +SL YG+T F +K G KK + +
Sbjct: 232 LKSKGVEKDIFKEHKKLVSMTEVNAKYRYVQLCRSLKTYGMTSFDVKIREYGKKKMVDHI 291
Query: 86 LGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFE--------- 136
LG+T +++ M + + + T +K W TD +F +
Sbjct: 292 LGITREQMLLMLTETKEVIMTHPLKHIKRWAA-----------TDKSFTLDFGDHETEYL 340
Query: 137 -CQSADCKVVHEFIGGYIFLSMRS-KDANQTLNED 169
Q+ + + + + IGGYI + M++ KD+++ + ++
Sbjct: 341 ILQTPNPEQISQLIGGYIEIIMKARKDSSKVIEKE 375
>sp|P52963|E41LA_MOUSE Band 4.1-like protein 4A OS=Mus musculus GN=Epb41l4a PE=2 SV=2
Length = 686
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 22 YVSS-RYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGH 80
YVS R++ + +L + I H + +EA+L+Y+R +SL YG+ L + G
Sbjct: 159 YVSEYRFVPDQKEELEEAIERIHKTLMGQAPSEAELNYLRTAKSLEMYGVDLHPV--YGE 216
Query: 81 KKEE-LLGVTPSRLMRMELSSGDHVRTW-RYDTVKAWNVNWEIKHMMLQLTDGNFIFECQ 138
K E LG+TPS ++ + W R V +E++ + + +F FE +
Sbjct: 217 NKSEYFLGLTPSGVVVYKNKKQVGKYFWPRITKVHFKETQFELRVLGKDCNETSFFFEAR 276
Query: 139 SA-------DCKVVHEFIGGYIFLSMRSKDAN 163
S C V H + F M ++N
Sbjct: 277 SKTACKHLWKCSVEH-----HTFFRMPDTESN 303
>sp|Q54K81|TALB_DICDI Talin-B OS=Dictyostelium discoideum GN=talB PE=2 SV=1
Length = 2614
Score = 37.0 bits (84), Expect = 0.065, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 50 GLTEA--KLSYIRAWQSLPDYGLTLFVIKP--MGHKK--EELLGVTPSRLMRMELSSGDH 103
G++E+ K Y++ +SL YG+T F+ K G KK +LLG+T ++R++ + +
Sbjct: 254 GMSESNSKFRYVQLCRSLKTYGITFFLTKERVKGQKKPVPKLLGITRDSILRLDAETKEV 313
Query: 104 VRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRS-KDA 162
+ + ++ W + + + + +++ + + + + + + GYI + M+ KD
Sbjct: 314 EHEYPLNHLRRWAASPQSFTLDFGDYEDDYV-SVITTEGEAISQLLSGYIEILMKKRKDT 372
Query: 163 NQTLNED 169
++E+
Sbjct: 373 GTVIDEN 379
>sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2
Length = 1087
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 16 DICAEDYVSS-RYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFV 74
D C DY+S R+ +L +++E H + + + EA++ ++ + L YG+ L
Sbjct: 243 DECGSDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHH 302
Query: 75 IKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNF 133
K E +LGV S L+ D +R R+ K ++++ + +++ G F
Sbjct: 303 AK-DSEGVEIMLGVCASGLLIYR----DRLRINRFAWPKVLKISYKRNNFYIKIRPGEF 356
>sp|Q9HCS5|E41LA_HUMAN Band 4.1-like protein 4A OS=Homo sapiens GN=EPB41L4A PE=1 SV=2
Length = 686
Score = 37.0 bits (84), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 22 YVSS-RYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGH 80
YVS R++ + +L + I H + +EA+L+Y+R +SL YG+ L + G
Sbjct: 159 YVSEYRFVPDQKEELEEAIERIHKTLMGQIPSEAELNYLRTAKSLEMYGVDLHPV--YGE 216
Query: 81 KKEE-LLGVTPSRLMRMELSSGDHVRTW-RYDTVKAWNVNWEIKHMMLQLTDGNFIFECQ 138
K E LG+TP ++ + W R V +E++ + + +F FE +
Sbjct: 217 NKSEYFLGLTPVGVVVYKNKKQVGKYFWPRITKVHFKETQFELRVLGKDCNETSFFFEAR 276
Query: 139 SA-------DCKVVHEFIGGYIFLSMRSKDAN 163
S C V H + F M ++N
Sbjct: 277 SKTACKHLWKCSVEH-----HTFFRMPENESN 303
>sp|Q9WV92|E41L3_MOUSE Band 4.1-like protein 3 OS=Mus musculus GN=Epb41l3 PE=1 SV=1
Length = 929
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 16 DICAEDYVSS-RYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFV 74
D C DY+S R+ +L +++E H + + + EA++ ++ + L YG+ L
Sbjct: 251 DECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHH 310
Query: 75 IKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNF 133
K E +LGV S L+ D +R R+ K ++++ + +++ G F
Sbjct: 311 AKD-SEGVEIMLGVCASGLLIYR----DRLRINRFAWPKVLKISYKRNNFYIKIRPGEF 364
>sp|Q46JQ9|SYGA_PROMT Glycine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain NATL2A) GN=glyQ PE=3 SV=1
Length = 290
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 91 SRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
S L + +S+ DH +R W T+ AW V WE+ +++T + +C DCK V
Sbjct: 94 SSLEALGISAKDHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCKPV 153
>sp|Q3ALF2|SYGA_SYNSC Glycine--tRNA ligase alpha subunit OS=Synechococcus sp. (strain
CC9605) GN=glyQ PE=3 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 87 GVTPSRLMRME---LSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQ 138
G+ + L +E + + DH +R W T+ AW V WE+ +++T + +C
Sbjct: 87 GIQETYLASLEALGIKAADHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCG 146
Query: 139 SADCKVVH-EFIGGYIFLSMRSKD 161
DCK V E G L+M +D
Sbjct: 147 GIDCKPVSIEITYGLERLAMYLQD 170
>sp|Q7U5N2|SYGA_SYNPX Glycine--tRNA ligase alpha subunit OS=Synechococcus sp. (strain
WH8102) GN=glyQ PE=3 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 91 SRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
+ L + + + DH +R W T+ AW V WE+ +++T + +C DCK V
Sbjct: 94 ASLAALGIKAADHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCKPV 153
>sp|A5GMN1|SYGA_SYNPW Glycine--tRNA ligase alpha subunit OS=Synechococcus sp. (strain
WH7803) GN=glyQ PE=3 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 87 GVTPSRLMRME---LSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQ 138
G+ + L +E + + DH +R W T+ AW V WE+ +++T + +C
Sbjct: 87 GIQETYLASLEALGIKAADHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCG 146
Query: 139 SADCKVVH-EFIGGYIFLSMRSKD 161
DCK V E G L+M +D
Sbjct: 147 GLDCKPVSIEITYGLERLAMYLQD 170
>sp|Q68DX3|FRPD2_HUMAN FERM and PDZ domain-containing protein 2 OS=Homo sapiens GN=FRMPD2
PE=1 SV=3
Length = 1309
Score = 33.9 bits (76), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 20 EDYVSSRYIKKLRS-KLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPM 78
EDY+ + I+++ + ++ + E H L +A+L ++R Q LP+YG+ + +
Sbjct: 496 EDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSE 555
Query: 79 GHKKEE--LLGVTPSRLMRMELSSGDHVRTWRY 109
+ EE LG+ ++ E+ + + R+
Sbjct: 556 KRRPEEEMALGICAKGVIVYEVKNNSRIAMLRF 588
>sp|Q3AWZ4|SYGA_SYNS9 Glycine--tRNA ligase alpha subunit OS=Synechococcus sp. (strain
CC9902) GN=glyQ PE=3 SV=1
Length = 290
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 91 SRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
+ L + + + DH +R W T+ AW V WE+ +++T + +C DCK V
Sbjct: 94 ASLEALGIKAADHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCKPV 153
Query: 146 H-EFIGGYIFLSMRSKD 161
E G L+M +D
Sbjct: 154 SIEITYGLERLAMYLQD 170
>sp|Q10XW9|SYGA_TRIEI Glycine--tRNA ligase alpha subunit OS=Trichodesmium erythraeum
(strain IMS101) GN=glyQ PE=3 SV=1
Length = 294
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C S DC+ V
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGSIDCRPV 153
>sp|Q54EW0|FRMA_DICDI FERM domain-containing protein A OS=Dictyostelium discoideum
GN=frmA PE=2 SV=1
Length = 1154
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 5 APTPAISPASLD--ICAEDYV-SSRYIKKLRSK------------LSQRILEAHANVKDL 49
+PT +I A+L IC DYV S+ I ++R + + + IL + + +
Sbjct: 336 SPTESILFAALQCQICFGDYVHGSKEIDQIRQRDFLPMEFINQKNILKEILIQYQRLIGM 395
Query: 50 GLTEAKLSYIRAWQSLPDYGLTLFVI 75
+AKL+YI+ +SL YG T F +
Sbjct: 396 SEQKAKLNYIQLAKSLKTYGYTFFKV 421
>sp|Q7T3B0|EIF3M_DANRE Eukaryotic translation initiation factor 3 subunit M OS=Danio rerio
GN=eif3m PE=2 SV=2
Length = 375
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 102 DHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQ--SADCKVVHEFIGGY 152
D VR W D WN+N E KH +L+L + +C+ A KV+ E +G Y
Sbjct: 145 DQVRKWIVD----WNLNTEKKHTLLRLVYEALV-DCKKSEAAAKVMVELLGSY 192
>sp|Q24SW9|SYGA_DESHY Glycine--tRNA ligase alpha subunit OS=Desulfitobacterium hafniense
(strain Y51) GN=glyQ PE=3 SV=1
Length = 296
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 74 VIKPMGHKKEELLGVTPSRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQL 128
+IKP +EL L R+ ++ +H +R W T+ AW + WE+ +++
Sbjct: 80 IIKPSPDNIQELY---LQSLERLGVNPKEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEV 136
Query: 129 TDGNFIFECQSADCK-VVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
T + +C DCK V E G L+M ++ + + +T G
Sbjct: 137 TQFTYFQQCGGIDCKPVCAEITYGLERLAMYIQNKESVYDIEYVGDITYG 186
>sp|A2C3W9|SYGA_PROM1 Glycine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain NATL1A) GN=glyQ PE=3 SV=1
Length = 290
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 91 SRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
S L + +S+ +H +R W T+ AW V WE+ +++T + +C DCK V
Sbjct: 94 SSLEALGISAKEHDIRFVEDNWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCKPV 153
>sp|B8FUJ1|SYGA_DESHD Glycine--tRNA ligase alpha subunit OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=glyQ PE=3 SV=1
Length = 296
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 74 VIKPMGHKKEELLGVTPSRLMRMELSSGDH-VR----TWRYDTVKAWNVNWEIKHMMLQL 128
+IKP +EL L R+ ++ +H +R W T+ AW + WE+ +++
Sbjct: 80 IIKPSPDNIQELY---LQSLERLGVNPKEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEV 136
Query: 129 TDGNFIFECQSADCK-VVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGG 177
T + +C DCK V E G L+M ++ + + +T G
Sbjct: 137 TQFTYFQQCGGIDCKPVCAEITYGLERLAMYIQNKESVYDIEYVGDITYG 186
>sp|A9BBH9|SYGA_PROM4 Glycine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain MIT 9211) GN=glyQ PE=3 SV=1
Length = 293
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DCK V
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCKPV 153
>sp|B0JSD7|SYGA_MICAN Glycine--tRNA ligase alpha subunit OS=Microcystis aeruginosa
(strain NIES-843) GN=glyQ PE=3 SV=1
Length = 291
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCK-VVHEFIGGYIFLSMRSKDA 162
W T+ AW V WE+ +++T + +C DC+ V E G L+M +D
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGIDCRPVAIEITYGLERLAMYLQDV 173
>sp|B7K0B0|SYGA_CYAP8 Glycine--tRNA ligase alpha subunit OS=Cyanothece sp. (strain PCC
8801) GN=glyQ PE=3 SV=1
Length = 290
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVH-EFIGGYIFLSMRSKDA 162
W T+ AW V WE+ +++T + +C DC+ V E G L+M +D
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGIDCRPVSIEITYGLERLAMYLQDV 173
>sp|Q88JX5|GALA_PSEPK Gallate dioxygenase OS=Pseudomonas putida (strain KT2440) GN=galA
PE=1 SV=1
Length = 340
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 12 PASLDICAEDYVSSRYIKKL-RSKLSQRIL-EAHANVKDLGLTEAKLSYIRA--WQSLPD 67
P +L+ A+ Y ++++ ++ + QR L E A ++ GL+E + +R W+ L
Sbjct: 229 PYTLERSAKGYRLNKFLHRMIEPQWRQRFLSEPEALYREAGLSEEESDLLRRRDWRGLIH 288
Query: 68 YGLTLFVIKPMGHKKEELLGVT 89
YG+ FV++ +G +LGV+
Sbjct: 289 YGVIFFVLEKLG----AVLGVS 306
>sp|B7KHU5|SYGA_CYAP7 Glycine--tRNA ligase alpha subunit OS=Cyanothece sp. (strain PCC
7424) GN=glyQ PE=3 SV=1
Length = 298
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGIDCRPV 155
>sp|Q7NKN1|SYGA_GLOVI Glycine--tRNA ligase alpha subunit OS=Gloeobacter violaceus (strain
PCC 7421) GN=glyQ PE=3 SV=1
Length = 290
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCRPV 153
>sp|Q31KD2|SYGA_SYNE7 Glycine--tRNA ligase alpha subunit OS=Synechococcus elongatus
(strain PCC 7942) GN=glyQ PE=3 SV=1
Length = 292
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCRPV 153
>sp|Q6DK91|EIF3M_XENTR Eukaryotic translation initiation factor 3 subunit M OS=Xenopus
tropicalis GN=eif3m PE=2 SV=1
Length = 374
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 102 DHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSAD--CKVVHEFIGGY 152
D VR W D WN++ E KH++L+L + +C+ +D KV+ E +G Y
Sbjct: 145 DQVRKWISD----WNLSTEKKHIVLRLLYEALV-DCKKSDEAAKVMVELLGSY 192
>sp|Q7ZYU8|EIF3M_XENLA Eukaryotic translation initiation factor 3 subunit M OS=Xenopus
laevis GN=eif3m PE=2 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 102 DHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSAD--CKVVHEFIGGY 152
D VR W D WN++ E KH++L+L + +C+ +D KV+ E +G Y
Sbjct: 145 DQVRKWISD----WNLSTEKKHVVLRLLYEALV-DCKKSDEAAKVMVELLGSY 192
>sp|Q55716|SYGA_SYNY3 Glycine--tRNA ligase alpha subunit OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=glyQ PE=3 SV=1
Length = 299
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCRPV 155
>sp|B1WQ23|SYGA_CYAA5 Glycine--tRNA ligase alpha subunit OS=Cyanothece sp. (strain ATCC
51142) GN=glyQ PE=3 SV=1
Length = 291
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGIDCRPV 155
>sp|B0CEQ4|SYGA_ACAM1 Glycine--tRNA ligase alpha subunit OS=Acaryochloris marina (strain
MBIC 11017) GN=glyQ PE=3 SV=1
Length = 293
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVH-EFIGGYIFLSMRSKDANQ 164
W V AW V WE+ +++T + +C DC+ V E G L+M ++ +
Sbjct: 114 NWEDAAVGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPVSIELTYGLERLTMYLQETDA 173
Query: 165 TLNEDLFHKLTGG 177
D LT G
Sbjct: 174 IAKIDWNGTLTYG 186
>sp|B1XNV4|SYGA_SYNP2 Glycine--tRNA ligase alpha subunit OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=glyQ PE=3 SV=1
Length = 293
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 116 NWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGLDCRPV 155
>sp|A8G5W1|SYGA_PROM2 Glycine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain MIT 9215) GN=glyQ PE=3 SV=1
Length = 295
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DCK +
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGIDCKPI 153
>sp|Q5R8C4|EIF3M_PONAB Eukaryotic translation initiation factor 3 subunit M OS=Pongo
abelii GN=EIF3M PE=2 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 102 DHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADC--KVVHEFIGGY 152
D VR W D WN+ E KH +L+L + +C+ +D KV+ E +G Y
Sbjct: 145 DQVRKWISD----WNLTTEKKHTLLRLLYEALV-DCKKSDAASKVMVELLGSY 192
>sp|Q7VB32|SYGA_PROMA Glycine--tRNA ligase alpha subunit OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=glyQ PE=3 SV=1
Length = 296
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 106 TWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVV 145
W T+ AW V WE+ +++T + +C DC+ V
Sbjct: 114 NWESPTLGAWGVGWEVWLDGMEVTQFTYFQQCGGLDCRPV 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,448,763
Number of Sequences: 539616
Number of extensions: 2626715
Number of successful extensions: 5497
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5428
Number of HSP's gapped (non-prelim): 80
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)