Query psy14197
Match_columns 178
No_of_seqs 112 out of 277
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 21:55:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f7g_A Talin-1; alpha-helix bu 100.0 1.1E-32 3.8E-37 223.6 16.3 143 14-161 74-221 (222)
2 1mix_A Talin; focal adhesion, 100.0 4.4E-30 1.5E-34 204.8 14.2 139 14-157 63-206 (206)
3 3ivf_A Talin-1; FERM domain, c 100.0 1.8E-28 6.2E-33 212.1 15.4 139 14-157 228-371 (371)
4 4dxa_B KREV interaction trappe 100.0 2.4E-28 8.2E-33 208.0 13.4 140 19-159 167-318 (322)
5 1h4r_A Merlin; FERM, neurofibr 99.9 2.3E-25 7.8E-30 188.5 17.5 146 13-161 160-313 (314)
6 1ef1_A Moesin; membrane, FERM 99.9 3E-25 1E-29 185.9 17.6 146 13-161 140-293 (294)
7 3au4_A Myosin-X; protein-prote 99.9 4.4E-24 1.5E-28 193.3 16.9 146 17-165 366-546 (555)
8 2i1j_A Moesin; FERM, coiled-co 99.9 9E-24 3.1E-28 192.7 18.1 146 13-161 143-296 (575)
9 2al6_A Focal adhesion kinase 1 99.9 4.7E-23 1.6E-27 178.9 16.0 142 18-160 172-325 (375)
10 3pvl_A Myosin VIIA isoform 1; 99.9 1.1E-22 3.8E-27 187.9 12.7 141 17-159 417-572 (655)
11 4eku_A Protein-tyrosine kinase 99.9 1.8E-21 6.1E-26 170.4 15.3 143 17-159 191-341 (392)
12 3qij_A Protein 4.1; cytoskelet 99.8 5E-20 1.7E-24 155.3 14.7 129 14-153 155-292 (296)
13 2j0j_A Focal adhesion kinase 1 98.9 1.6E-08 5.6E-13 92.8 14.8 141 17-157 171-322 (656)
14 1j0w_A Downstream of tyrosine 98.1 7.6E-05 2.6E-09 53.6 11.4 73 83-157 22-99 (103)
15 2v76_A Docking protein 1; alte 97.8 0.00041 1.4E-08 50.0 10.9 72 82-155 23-102 (107)
16 1p5t_A DOK1, docking protein 1 97.7 0.00069 2.4E-08 50.3 12.2 79 83-163 26-112 (127)
17 2dlw_A Docking protein 2, isof 97.6 0.00018 6.2E-09 52.4 7.2 75 82-158 28-107 (113)
18 3ml4_A Protein DOK-7; tyrosine 97.4 0.0035 1.2E-07 50.6 12.8 82 71-154 116-205 (224)
19 2kup_A Fibroblast growth facto 97.4 0.0016 5.6E-08 49.3 9.9 92 71-166 19-118 (146)
20 2kuq_A Fibroblast growth facto 97.3 0.0029 9.9E-08 48.2 10.2 69 83-155 35-107 (153)
21 1xr0_B FGFR signalling adaptor 97.3 0.0052 1.8E-07 45.6 11.4 88 71-162 12-107 (129)
22 3d8d_A Amyloid beta A4 precurs 97.3 0.0024 8.2E-08 48.5 9.7 79 82-161 55-142 (148)
23 1qqg_A IRS-1, insulin receptor 96.8 0.014 4.7E-07 47.9 10.9 77 83-162 179-259 (264)
24 3f0w_A NUMB-R, NUMB-like prote 96.6 0.018 6.2E-07 44.1 9.7 79 82-160 78-163 (168)
25 1ntv_A Disabled homolog 1; bet 95.9 0.049 1.7E-06 40.9 9.0 78 82-159 61-142 (152)
26 1aqc_A X11; PTB domain; 2.30A 95.9 0.075 2.6E-06 40.8 10.1 73 82-156 64-160 (172)
27 3so6_A LDL receptor adaptor pr 95.2 0.16 5.4E-06 36.9 9.3 76 82-157 44-127 (137)
28 2ej8_A DCC-interacting protein 95.2 0.11 3.9E-06 39.2 8.7 77 82-158 57-144 (160)
29 1p3r_A Disabled homolog 2; PTB 94.9 0.12 4E-06 39.2 8.0 76 83-158 61-140 (160)
30 2ela_A Adapter protein contain 94.7 0.14 4.8E-06 39.4 8.1 74 83-156 71-155 (175)
31 4dbb_A Amyloid beta A4 precurs 94.7 0.36 1.2E-05 36.6 10.3 75 82-158 53-134 (162)
32 2cy5_A Epidermal growth factor 94.5 0.28 9.5E-06 36.7 8.9 76 83-158 50-135 (140)
33 1hbk_A ACBP, acyl-COA binding 93.5 0.066 2.3E-06 36.9 3.6 30 40-69 58-88 (89)
34 2lbb_A Acyl COA binding protei 93.2 0.06 2.1E-06 37.8 3.0 30 40-69 65-95 (96)
35 1n3h_A SHC transforming protei 93.0 0.23 8E-06 39.2 6.6 68 82-149 120-194 (207)
36 2cb8_A Acyl-COA-binding protei 92.9 0.065 2.2E-06 36.9 2.8 26 40-65 56-81 (87)
37 3epy_A Acyl-COA-binding domain 92.5 0.077 2.6E-06 36.7 2.8 30 40-69 58-88 (89)
38 1st7_A ACBP, acyl-COA-binding 92.4 0.058 2E-06 37.0 2.0 26 40-65 55-80 (86)
39 2wh5_A Acyl-COA-binding domain 92.2 0.085 2.9E-06 37.7 2.8 26 40-65 66-91 (106)
40 2cop_A Acyl-coenzyme A binding 91.9 0.097 3.3E-06 37.5 2.8 31 40-70 62-93 (109)
41 3flv_A Acyl-COA-binding domain 90.8 0.13 4.5E-06 37.5 2.6 25 40-64 82-106 (119)
42 2cqu_A Peroxisomal D3,D2-enoyl 90.8 0.12 4.1E-06 37.5 2.3 30 40-69 70-100 (116)
43 3fp5_A Acyl-COA binding protei 90.3 0.18 6E-06 36.0 2.8 25 40-64 62-86 (106)
44 3suz_A Amyloid beta A4 precurs 85.8 6.3 0.00022 33.5 10.2 69 83-153 67-159 (388)
45 3dxe_A Amyloid beta A4 protein 84.9 2.5 8.5E-05 31.4 6.3 75 82-157 46-125 (140)
46 2dyq_A Amyloid beta A4 precurs 78.4 10 0.00035 28.2 7.7 74 82-156 54-137 (144)
47 1wgu_A APBB2, amyloid beta (A4 75.6 8.1 0.00028 28.3 6.4 70 82-152 54-129 (136)
48 2ysz_A Amyloid beta A4 precurs 73.5 10 0.00034 29.4 6.7 76 82-158 54-135 (185)
49 3hsa_A Pleckstrin homology dom 71.4 17 0.00059 26.4 7.2 70 84-153 43-124 (126)
50 2yt0_A Amyloid beta A4 protein 65.6 12 0.00043 28.6 5.6 45 82-126 100-145 (176)
51 3a58_A Exocyst complex compone 52.1 57 0.002 27.2 7.7 73 82-159 135-220 (320)
52 1wvh_A Tensin, tensin1; beta s 50.9 62 0.0021 23.6 7.0 38 83-120 41-79 (134)
53 3b77_A Uncharacterized protein 46.9 55 0.0019 25.4 6.5 75 84-158 39-124 (193)
54 3zxu_A MCM21; cell cycle, COMA 46.7 26 0.00091 29.0 4.8 45 41-91 99-143 (296)
55 3mbr_X Glutamine cyclotransfer 44.6 26 0.00087 28.0 4.4 32 84-115 162-194 (243)
56 3hie_A Protein PSL1, exocyst c 40.1 1.2E+02 0.0041 23.0 9.3 73 85-160 70-151 (171)
57 3peg_A Neurofibromin; SEC14 do 39.8 1.5E+02 0.0052 24.0 9.4 71 80-151 202-279 (290)
58 3pg7_A Neurofibromin; SEC lipi 39.0 43 0.0015 26.7 5.0 79 72-151 160-245 (256)
59 4dx8_A Integrin beta-1-binding 37.9 1.3E+02 0.0043 22.6 8.4 76 83-158 63-150 (154)
60 3nol_A Glutamine cyclotransfer 37.3 25 0.00085 28.5 3.3 31 85-115 185-216 (262)
61 3nok_A Glutaminyl cyclase; bet 34.7 30 0.001 28.1 3.4 30 84-113 193-223 (268)
62 3rhi_A DNA-binding protein HU; 32.9 1E+02 0.0035 20.3 5.5 39 38-78 8-58 (93)
63 1pfj_A TFIIH basal transcripti 31.3 1.4E+02 0.0046 21.0 8.2 84 72-155 9-102 (108)
64 2hc5_A ORF 99, hypothetical pr 28.4 34 0.0012 24.4 2.4 22 93-114 71-92 (117)
65 1mw5_A Hypothetical protein HI 26.9 46 0.0016 24.4 2.9 26 48-73 48-73 (187)
66 2iwa_A Glutamine cyclotransfer 21.6 2.1E+02 0.0073 22.6 6.3 23 90-112 171-193 (266)
67 3k8u_A Putative ABC transporte 21.5 65 0.0022 22.9 2.9 29 86-114 101-129 (156)
68 3hqc_A Tensin-like C1 domain-c 21.4 74 0.0025 23.9 3.2 38 83-120 53-91 (157)
69 2k0m_A Uncharacterized protein 20.2 2.2E+02 0.0076 19.6 5.8 57 35-92 23-85 (104)
No 1
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=100.00 E-value=1.1e-32 Score=223.61 Aligned_cols=143 Identities=25% Similarity=0.503 Sum_probs=128.4
Q ss_pred cccccccccCChHHHHHhhhHHHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecC--CC--CceEEEEc
Q psy14197 14 SLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG--HK--KEELLGVT 89 (178)
Q Consensus 14 ~~~~~l~~~lP~~~ik~~~~k~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g--~~--~p~lLGI~ 89 (178)
+++..++.|+|+++++. .|+++|.++|+++.|+|+.|||++||++|++||+||++||.|+.+. .+ .|.+||||
T Consensus 74 ~~~~~l~~~lP~~~~~~---~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~ 150 (222)
T 4f7g_A 74 AGFLDLKDFLPKEYVKQ---KGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGIT 150 (222)
T ss_dssp SSCSCGGGTSCGGGGGG---CCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEEC
T ss_pred cCccchhhccCHHHHhh---hhHHHHHHHHHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEc
Confidence 56789999999999873 3689999999999999999999999999999999999999999863 33 37899999
Q ss_pred CCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHHHHHHHHhhhhhHhhhccc
Q psy14197 90 PSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKD 161 (178)
Q Consensus 90 ~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~~i~~Li~~Yi~l~~~~~~ 161 (178)
++||.++|++|++++.+|||++|.+|+.+. +.|+|.+++. +..|.|+|+++++|++||+|||++++++|+
T Consensus 151 ~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~--~~f~I~~~~~~~~~~~~~T~q~~~I~~Li~~Yi~~~~~~r~ 221 (222)
T 4f7g_A 151 KECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKK 221 (222)
T ss_dssp SSEEEEECTTTCCEEEEEEGGGCCEEEECS--SEEEEECCTTSSSCEEEECSCHHHHHHHHHHHHHHTC----
T ss_pred CCcEEEEcCCCCceeEeccHHHeeeeccCC--CEEEEEECCccceEEEEECCcHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999887 8999999987 567999999999999999999999999876
No 2
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=99.97 E-value=4.4e-30 Score=204.83 Aligned_cols=139 Identities=25% Similarity=0.493 Sum_probs=127.7
Q ss_pred cccccccccCChHHHHHhhhHHHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecC--CC--CceEEEEc
Q psy14197 14 SLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG--HK--KEELLGVT 89 (178)
Q Consensus 14 ~~~~~l~~~lP~~~ik~~~~k~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g--~~--~p~lLGI~ 89 (178)
+++.+++.|+|+++++..+ +++|.++|+++.|+|+.|||.+||++|++||+||++||.|+.+. .+ .|.+||||
T Consensus 63 ~~~~~~~~~lP~~~~~~~~---~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~ 139 (206)
T 1mix_A 63 PGFLELKDFLPKEYIKQKG---ERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGIT 139 (206)
T ss_dssp TTCSCGGGTSCGGGSTTCC---HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEEC
T ss_pred CCccchHhhCCHHHhhccc---HHHHHHHHHHccCCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEc
Confidence 5678899999999988665 88899999999999999999999999999999999999999863 33 47899999
Q ss_pred CCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHHHHHHHHhhhhhHhh
Q psy14197 90 PSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSM 157 (178)
Q Consensus 90 ~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~~i~~Li~~Yi~l~~ 157 (178)
++||.++|++|++.+.+|||++|++|..+. +.|+|.+++. ...|.|+|.+++.|.+||+|||++++
T Consensus 140 ~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~~--~~f~i~~~~~~~~~~~~~t~~~~~i~~Li~~Yi~~~~ 206 (206)
T 1mix_A 140 KECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 206 (206)
T ss_dssp SSEEEEEETTTCCEEEEEEGGGCCEEEECS--SEEEEECGGGSSSCEEEECSCHHHHHHHHHTTSCCCC
T ss_pred ccceEEeCCCCCceeeeeehhHeeecccCC--CEEEEEeCcccceEEEEECCcHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999977 8999999988 55799999999999999999998764
No 3
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=99.96 E-value=1.8e-28 Score=212.10 Aligned_cols=139 Identities=26% Similarity=0.534 Sum_probs=126.1
Q ss_pred cccccccccCChHHHHHhhhHHHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeec--CCCC--ceEEEEc
Q psy14197 14 SLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPM--GHKK--EELLGVT 89 (178)
Q Consensus 14 ~~~~~l~~~lP~~~ik~~~~k~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~--g~~~--p~lLGI~ 89 (178)
+++..+++|+|+++++..+ +++|.++|+++.|+|+.||++.||+.|++||+||++||.|+.+ |.+. |.+||||
T Consensus 228 ~~~~~l~~~lP~~~~~~~~---e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~~~~~~~LgI~ 304 (371)
T 3ivf_A 228 AGFLDLKDFLPKEYVKQKG---ERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGIT 304 (371)
T ss_dssp TTCSCGGGTSCGGGTTSCH---HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSSCEEEEEEEEC
T ss_pred cchhcccccCCHHHhCchH---HHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCCCCccEEEEEc
Confidence 5678899999999987544 7789999999999999999999999999999999999999865 3333 6899999
Q ss_pred CCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHHHHHHHHhhhhhHhh
Q psy14197 90 PSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSM 157 (178)
Q Consensus 90 ~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~~i~~Li~~Yi~l~~ 157 (178)
++||.++|++|++.+.+|||++|.+|..+. +.|+|.+|+. +..|.|+|+++++|++||+|||++|+
T Consensus 305 ~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~--~~f~I~~~~~~~~~~~~~T~~~~~I~~Li~~Yi~~i~ 371 (371)
T 3ivf_A 305 KECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIIL 371 (371)
T ss_dssp SSEEEEEETTTCCEEEEEEGGGCCEEEEET--TEEEEECGGGSSSCEEEECSCHHHHHHHHHHHHHC--
T ss_pred CCcEEEEcCCCCceEEeeehhheeeeecCC--CEEEEEECCccCcEEEEECChHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999987 8999999987 57899999999999999999999874
No 4
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=99.95 E-value=2.4e-28 Score=208.03 Aligned_cols=140 Identities=13% Similarity=0.220 Sum_probs=122.7
Q ss_pred ccccCChHHHHHhhhHHHHHHHHHHhcc---CCCChh--HHHHHHHHHHhcCCCCceeEEEEeecCC----C---CceEE
Q psy14197 19 AEDYVSSRYIKKLRSKLSQRILEAHANV---KDLGLT--EAKLSYIRAWQSLPDYGLTLFVIKPMGH----K---KEELL 86 (178)
Q Consensus 19 l~~~lP~~~ik~~~~k~~~~I~~~h~~~---~~ls~~--eAK~~yLk~~~~lp~fG~tfF~Vk~~g~----~---~p~lL 86 (178)
+++|+|+++++.....|+++|.++|+++ .|+|+. +||+.||++|++||+||++||.|+...+ + .+.+|
T Consensus 167 l~~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~lp~yG~~~f~v~~~~~~~g~~~~~~~~~L 246 (322)
T 4dxa_B 167 LKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYV 246 (322)
T ss_dssp HTTTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECC-------EEEEEE
T ss_pred hhhhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHhcCCCcCeEEEEEEEeccCCCCccCCCeEEE
Confidence 7899999999864333999999999999 999965 5699999999999999999999996321 1 37899
Q ss_pred EEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCCCeEEEEecCCHHHHHHHHhhhhhHhhhc
Q psy14197 87 GVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRS 159 (178)
Q Consensus 87 GI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~~~~~~~~T~~~~~i~~Li~~Yi~l~~~~ 159 (178)
|||.+||.++|++||+++.++||++|. |.++++.++|+|.+|+....+.|+|+++++|.+||.+|++.+.++
T Consensus 247 gV~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s~~~~~f~i~~~~~~~~~~~~t~q~~~i~~li~~~~~~~~~~ 318 (322)
T 4dxa_B 247 GVNIKGLHLLNMETKALLISLKYGCFM-WQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVKLLMKLNGQLMPT 318 (322)
T ss_dssp EECSSEEEEEETTTCCEEEEEETTSEE-EEECSSTTEEEEEESSSCCEEEEECTTHHHHHHHHHHHHHTC---
T ss_pred EEccCceEEEcCCCceeeeccccceeE-EeecCCCCEEEEEECCCCccEEEEeCcHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999997 998888899999999987789999999999999999999999886
No 5
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=99.93 E-value=2.3e-25 Score=188.47 Aligned_cols=146 Identities=21% Similarity=0.260 Sum_probs=130.7
Q ss_pred CcccccccccCChHHHHHhh--hH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCCCCceEEEEc
Q psy14197 13 ASLDICAEDYVSSRYIKKLR--SK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVT 89 (178)
Q Consensus 13 ~~~~~~l~~~lP~~~ik~~~--~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~~~p~lLGI~ 89 (178)
.++++.++.|+|++++++.+ .+ |+++|.++|+++.|+|+.||+++||++|++||+||++||.|+.+ ...+.+||||
T Consensus 160 ~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~f~v~~~-~g~~~~LgI~ 238 (314)
T 1h4r_A 160 KRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNK-KGTELLLGVD 238 (314)
T ss_dssp CTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEET-TCCEEEEEEC
T ss_pred chhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCccCceEEEeecC-CCCEEEEEEe
Confidence 35678899999999999754 46 99999999999999999999999999999999999999999964 3368999999
Q ss_pred CCcEEEEeCCCCC-eEEeeecccccccccccCCceEEEEecCC-CeEEEEecCC---HHHHHHHHhhhhhHhhhccc
Q psy14197 90 PSRLMRMELSSGD-HVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSAD---CKVVHEFIGGYIFLSMRSKD 161 (178)
Q Consensus 90 ~~gv~~id~~tke-il~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~---~~~i~~Li~~Yi~l~~~~~~ 161 (178)
++||.++|++++. ++.++||++|.+|..+. +.|+|.+++. ...|.+.|.+ ++.|.+||.+|+.+++++|+
T Consensus 239 ~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~--~~f~i~~~~~~~~~~~f~~~~~~~~k~i~~l~~~~h~f~~~~r~ 313 (314)
T 1h4r_A 239 ALGLHIYDPENRLTPKISFPWNEIRNISYSD--KEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 313 (314)
T ss_dssp SSEEEEECTTCSSSCSEEEEGGGEEEEEEET--TEEEEEESSTTSCCEEEECCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeCCCCcccceEEecccceEEEeeC--CEEEEEEcCCCCceEEEEcCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999996 68899999999999887 8999999877 4567778865 88899999999999999875
No 6
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=99.93 E-value=3e-25 Score=185.86 Aligned_cols=146 Identities=21% Similarity=0.241 Sum_probs=130.8
Q ss_pred CcccccccccCChHHHHHhh--hH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCCCCceEEEEc
Q psy14197 13 ASLDICAEDYVSSRYIKKLR--SK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVT 89 (178)
Q Consensus 13 ~~~~~~l~~~lP~~~ik~~~--~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~~~p~lLGI~ 89 (178)
.++++....|+|++++++.+ .+ |+++|.++|+++.|+|+.|||..||+++++||+||++||.|+.+ ...+.+||||
T Consensus 140 ~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~~~~lp~yG~~~f~v~~~-~g~~~~Lgv~ 218 (294)
T 1ef1_A 140 KSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNK-KGSELWLGVD 218 (294)
T ss_dssp CTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECT-TCCEEEEEEE
T ss_pred ChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHcccCccCceEEeeecC-CCCEEEEEEe
Confidence 35678889999999999865 56 99999999999999999999999999999999999999999864 3368999999
Q ss_pred CCcEEEEeCCCC-CeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCC---HHHHHHHHhhhhhHhhhccc
Q psy14197 90 PSRLMRMELSSG-DHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSAD---CKVVHEFIGGYIFLSMRSKD 161 (178)
Q Consensus 90 ~~gv~~id~~tk-eil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~---~~~i~~Li~~Yi~l~~~~~~ 161 (178)
+.||.++|++++ ..+.++||++|++|..+. +.|+|.+++. ...|.+.|.+ ++.+-+||.+|+.+++++|+
T Consensus 219 ~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~--~~f~i~~~~~~~~~~~f~~~~~~~~k~l~~l~~~~h~f~~~~r~ 293 (294)
T 1ef1_A 219 ALGLNIYEQNDRLTPKIGFPWSEIRNISFND--KKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRK 293 (294)
T ss_dssp TTEEEEEETTCSSSCSEEEEGGGEEEEEEET--TEEEEEESSSSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEEeCCCccccceEEEcccceEeeecC--CEEEEEEccCccceEEEEeCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999 678999999999999988 8999999875 4567778876 78888999999999999765
No 7
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=99.92 E-value=4.4e-24 Score=193.27 Aligned_cols=146 Identities=14% Similarity=0.252 Sum_probs=125.4
Q ss_pred ccccccCChHHHHH------------------------hhhH-H--------HHHHHHHHhccCCCChhHHHHHHHHHHh
Q psy14197 17 ICAEDYVSSRYIKK------------------------LRSK-L--------SQRILEAHANVKDLGLTEAKLSYIRAWQ 63 (178)
Q Consensus 17 ~~l~~~lP~~~ik~------------------------~~~k-~--------~~~I~~~h~~~~~ls~~eAK~~yLk~~~ 63 (178)
..++.|+|+.+++. .+.+ | +++|.+.|+++.|+|+.|||+.||++++
T Consensus 366 ~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~ 445 (555)
T 3au4_A 366 PPLEEVYSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIK 445 (555)
T ss_dssp CCGGGTSCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHT
T ss_pred hhhhhhCCHHHhhhhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 47889999988764 1123 4 8899999999999999999999999999
Q ss_pred cCCCCceeEEEEeecCC--CCceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCCCeEEEEecCC
Q psy14197 64 SLPDYGLTLFVIKPMGH--KKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSAD 141 (178)
Q Consensus 64 ~lp~fG~tfF~Vk~~g~--~~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~~~~~~~~T~~ 141 (178)
+||+||++||.|+.++. +.+.+||||..||.++|+++++++.+|||++|.+|... ..+.|+|.+++. .|.|+|.+
T Consensus 446 ~lp~yG~~~F~v~~~~~~~~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~-~~~~f~i~~~~~--~l~f~T~q 522 (555)
T 3au4_A 446 EWPGYGSTLFDVECKEGGFPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAP-LANTYKIVVDER--ELLFETSE 522 (555)
T ss_dssp TSTTTTCEEEEEEEEESSSCSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEE-ETTEEEEEETTE--EEEEECTT
T ss_pred hCCCcCceEEEEEecCCCCCceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCC-CCCEEEEEECCc--EEEEECCC
Confidence 99999999999987543 35789999999999999999999999999999999852 237899999853 69999999
Q ss_pred HHHHHHHHhhhhhHhhhccccccc
Q psy14197 142 CKVVHEFIGGYIFLSMRSKDANQT 165 (178)
Q Consensus 142 ~~~i~~Li~~Yi~l~~~~~~~~q~ 165 (178)
++.|.+||.+|+.+++++|.+...
T Consensus 523 a~~i~~LI~~Yi~~l~~~r~~~~~ 546 (555)
T 3au4_A 523 VVDVAKLMKAYISMIVKKRYSTTR 546 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHhhhccCC
Confidence 999999999999999987765543
No 8
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=99.91 E-value=9e-24 Score=192.69 Aligned_cols=146 Identities=17% Similarity=0.201 Sum_probs=130.0
Q ss_pred CcccccccccCChHHHHHhh--hH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCCCCceEEEEc
Q psy14197 13 ASLDICAEDYVSSRYIKKLR--SK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVT 89 (178)
Q Consensus 13 ~~~~~~l~~~lP~~~ik~~~--~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~~~p~lLGI~ 89 (178)
.++++....|+|+++++..+ .+ |.+.|..+|+++.|+|+.+|++.||++|++||+||++||.|+.+ ...+.+||||
T Consensus 143 ~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a~~lp~YG~~~F~vkd~-~g~~l~LGV~ 221 (575)
T 2i1j_A 143 GPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIAQDLEMYGVNYFEIRNK-KNTELWLGVD 221 (575)
T ss_dssp CTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECT-TCCEEEEEEC
T ss_pred ccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhccccCCEEEEEEec-CCCEEEEEEc
Confidence 46788889999999999764 55 99999999999999999999999999999999999999999853 3468999999
Q ss_pred CCcEEEEeCCCC-CeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCC---HHHHHHHHhhhhhHhhhccc
Q psy14197 90 PSRLMRMELSSG-DHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSAD---CKVVHEFIGGYIFLSMRSKD 161 (178)
Q Consensus 90 ~~gv~~id~~tk-eil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~---~~~i~~Li~~Yi~l~~~~~~ 161 (178)
+.||.++++.++ ..+.+|||++|.+|..+. +.|+|.+++. ...|.+.|++ ++.|..||.+|+.+++++++
T Consensus 222 ~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~--k~F~I~~~~~~~~~l~F~t~~~~~ak~i~~lc~~~H~ff~~~r~ 296 (575)
T 2i1j_A 222 ALGLNIYEKDDKLTPKIGFPWSEIRNISFND--RKFIIKPIDKKAPDFVFFAPRVRVNKRILALCMGNHELYMRRRK 296 (575)
T ss_dssp SSEEEEEETTCSSSCSEEEEGGGEEEEEEET--TEEEEEESCTTSCCEEEECSCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCeeEEEeCCCCcccceEecHHHhhcccCCC--CeEEEEEccCCcceeEEEeCCchhHHHHHHHHHHHHHHHHHccC
Confidence 999999999998 678899999999999988 8999999876 4567778866 77888999999999988654
No 9
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=99.90 E-value=4.7e-23 Score=178.90 Aligned_cols=142 Identities=11% Similarity=0.160 Sum_probs=125.0
Q ss_pred cccccCChHHHHHhhhH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCC-CC--ceEEEEcCCcE
Q psy14197 18 CAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGH-KK--EELLGVTPSRL 93 (178)
Q Consensus 18 ~l~~~lP~~~ik~~~~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~-~~--p~lLGI~~~gv 93 (178)
.++.|||++++++.+.+ |+++|.++|+++.|+|+.|||++||+++++||+||+++|.|+.... +. +++|||+. ||
T Consensus 172 ~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~l~~yG~~~F~v~~~~~~~~~~~l~lg~~~-GI 250 (375)
T 2al6_A 172 GLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEE-GI 250 (375)
T ss_dssp CGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTCCCSCEEEEEEECSSSCEEEEEEEETTT-EE
T ss_pred cHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhhcccCCcEEEEEeecCCCCcceEEEEecCC-CE
Confidence 38899999999999988 9999999999999999999999999999999999999999998643 33 57899976 99
Q ss_pred EEEeCCCCCeEEeeecccccccccc-----cCCceEEEEecCC--CeEEEEec-CCHHHHHHHHhhhhhHhhhcc
Q psy14197 94 MRMELSSGDHVRTWRYDTVKAWNVN-----WEIKHMMLQLTDG--NFIFECQS-ADCKVVHEFIGGYIFLSMRSK 160 (178)
Q Consensus 94 ~~id~~tkeil~~~~~s~i~~w~~~-----~~~~~f~l~fg~~--~~~~~~~T-~~~~~i~~Li~~Yi~l~~~~~ 160 (178)
.++++++++....++|++|.+|.+. .+...|+|...+. ...|.|+| .+++.|.+||.||+.++..++
T Consensus 251 ~~~~~~~~~~~~~~~f~~I~~i~~~~~~~~~~~~~~~I~v~~~~~~~~f~~~t~~~a~~i~~Li~gY~rl~~~~~ 325 (375)
T 2al6_A 251 SYLTDKGANPTHLADFNQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGAT 325 (375)
T ss_dssp EEESSTTSCEEEEECGGGEEEEEEECCSSSCCCEEEEEEETTCSSCEEEEESSHHHHHHHHHHHHHHHHHHHTCS
T ss_pred EEEeCCCCceEEEechhHccEEEEEeccccCCceEEEEEECCCCCcEEEEeCCHHHHHHHHHHHhhheEEecCCC
Confidence 9999999999999999999999753 2235688887664 57899999 699999999999999998653
No 10
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=99.88 E-value=1.1e-22 Score=187.86 Aligned_cols=141 Identities=10% Similarity=0.083 Sum_probs=122.4
Q ss_pred ccccccCChHHHHHh-hhH-HHHHHHHHHhcc----CCCChhHHHHHHHHHH-hcCCCCceeEEEEeec-CCC---CceE
Q psy14197 17 ICAEDYVSSRYIKKL-RSK-LSQRILEAHANV----KDLGLTEAKLSYIRAW-QSLPDYGLTLFVIKPM-GHK---KEEL 85 (178)
Q Consensus 17 ~~l~~~lP~~~ik~~-~~k-~~~~I~~~h~~~----~~ls~~eAK~~yLk~~-~~lp~fG~tfF~Vk~~-g~~---~p~l 85 (178)
..+++|+|+++++.. +.+ |+++|.++|+++ .|+|+.+||++||+.+ ++||+||++||.|+.. |.+ .+.+
T Consensus 417 ~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~YG~~fF~vk~~~g~~lp~~~l~ 496 (655)
T 3pvl_A 417 SLVPTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFSGPPLPKSDVI 496 (655)
T ss_dssp HHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTTSCEEEEEEEEESSCCSCSEEE
T ss_pred HHHHHhCCHHHHhccCCHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhccccCcEEEEEEecCCCCCCCccEE
Confidence 468899999998874 566 999999999999 9999999999999998 8999999999999975 333 3689
Q ss_pred EEEcCCcEEEEeCCCCCeEEeeecccccccccccCC----ceEEEEecCCCeEEEEecCCHHHHHHHHhhhhhHhhhc
Q psy14197 86 LGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEI----KHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRS 159 (178)
Q Consensus 86 LGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~----~~f~l~fg~~~~~~~~~T~~~~~i~~Li~~Yi~l~~~~ 159 (178)
||||+.||.++|+++|.+ .+|||++|.+|+.+.+. ..|+|...+ +..|.++|.++++|.+||.+|++.+-++
T Consensus 497 LgVn~~GV~v~d~~~k~l-l~f~~~eI~~is~~~~~~~~~~~ftl~~~~-~~~~~F~T~~a~~I~~LI~~yi~~Lk~r 572 (655)
T 3pvl_A 497 VAVNWTGVYFVDEQEQVL-LELSFPEIMAVSSSRGTKMMAPSFTLATIK-GDEYTFTSSNAEDIRDLVVTFLEGLRKR 572 (655)
T ss_dssp EEEETTEEEEECTTCCEE-EEEEGGGEEEEEEECCCSSSCCEEEEEETT-SCEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCceEEEcCCCceE-EEechhHceEEeccCcccccccEEEEEecc-CceEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999954 48999999999988642 578887543 4569999999999999999999988554
No 11
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=170.37 Aligned_cols=143 Identities=10% Similarity=0.166 Sum_probs=123.9
Q ss_pred ccccccCChHHHHHhhhH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecC-CCCceEEEEcCCcEE
Q psy14197 17 ICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG-HKKEELLGVTPSRLM 94 (178)
Q Consensus 17 ~~l~~~lP~~~ik~~~~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g-~~~p~lLGI~~~gv~ 94 (178)
..+++|||+++++..+.+ |+++|.+.|+++.|+|+.|||+.||+.+++||+||+++|.|+... .+.|..|.|+.+||.
T Consensus 191 ~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~Lp~yG~e~F~vk~~s~~~~~~~L~Vg~~GIs 270 (392)
T 4eku_A 191 VGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFANIDQETYRCELIQGWNITVDLVIGPKGIR 270 (392)
T ss_dssp TCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSSCCSCEEEEEEEESSSCCCEEEEEETTEEE
T ss_pred ccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhccCcEEEEEEeccCCcceeEEEEcCCcEE
Confidence 358899999999998888 999999999999999999999999999999999999999999843 334544444445999
Q ss_pred EEeCCCCCeEEeeeccccccccccc---CCceEEEEecCC--CeEEEEec-CCHHHHHHHHhhhhhHhhhc
Q psy14197 95 RMELSSGDHVRTWRYDTVKAWNVNW---EIKHMMLQLTDG--NFIFECQS-ADCKVVHEFIGGYIFLSMRS 159 (178)
Q Consensus 95 ~id~~tkeil~~~~~s~i~~w~~~~---~~~~f~l~fg~~--~~~~~~~T-~~~~~i~~Li~~Yi~l~~~~ 159 (178)
.+++++++....++|++|.+|+... +...|+|..++. ...|.|+| .+++.|.+||.||+.+...+
T Consensus 271 ~~~~k~~~~~~~~~f~~I~~Is~~~~s~~~~~v~I~~~~~~~~l~~~~~s~~~A~~~~~LidGY~RL~~d~ 341 (392)
T 4eku_A 271 QLTSQDAKPTCLAEFKQIRSIRCLPLEEGQAVLQLGIEGAPQALSIKTSSLAEAENMADLIDGYCRLQGEH 341 (392)
T ss_dssp EECSSCSCCEEEECGGGBCCCCEEEETTTEEEEEECBTTCSSCEEEEESCHHHHHHHHHHHHHHHHHHSSS
T ss_pred EECCCCCceeEEechHHceEEEEEeccCCceEEEEEECCCCcceEEEeCCHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999997533 336789999877 47888999 89999999999999987654
No 12
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=99.83 E-value=5e-20 Score=155.29 Aligned_cols=129 Identities=14% Similarity=0.243 Sum_probs=105.4
Q ss_pred cccccccccCChHHHHHhhhH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCCCCceEEEEcCCc
Q psy14197 14 SLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSR 92 (178)
Q Consensus 14 ~~~~~l~~~lP~~~ik~~~~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~~~p~lLGI~~~g 92 (178)
++++....|+|.+ .+ |+++|.++|+++.|+|+.||+++||++|++||+||++||.|+.. .+.+.+||||+.|
T Consensus 155 ~~yl~~~~~~P~~------~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~-~~~~~~LgV~~~G 227 (296)
T 3qij_A 155 VDYVSDFKLAPNQ------TKELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDL-EGVDIILGVCSSG 227 (296)
T ss_dssp TCCCTTSCCSSSC------CHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEECT-TSCEEEEEECSSE
T ss_pred hhhCcHhhcCCcC------HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEcC-CCCEEEEEECCCe
Confidence 4567778889975 34 99999999999999999999999999999999999999999853 3458999999999
Q ss_pred EEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-----CeEEEEecCCHHHHH---HHHhhhh
Q psy14197 93 LMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-----NFIFECQSADCKVVH---EFIGGYI 153 (178)
Q Consensus 93 v~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-----~~~~~~~T~~~~~i~---~Li~~Yi 153 (178)
|.++|++++ +.+|||++|.+|+.+. +.|+|.+++. ...+.+.+...+... .+|..+.
T Consensus 228 i~v~~~~~k--l~~f~w~~I~~~s~~~--k~F~i~~~~~~~~~~~~~~~f~~~~~~~~k~l~~~c~~~h 292 (296)
T 3qij_A 228 LLVYKDKLR--INRFPWPKVLKISYKR--SSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHH 292 (296)
T ss_dssp EEEEETTEE--EEEEEGGGEEEEEEET--TEEEEEEC-------CEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCe--EEEEEhhhcCEEEecC--CEEEEEEecCccCCccceEEEECCCHHHHHHHHHHHHHhc
Confidence 999999876 8999999999999888 9999998754 245566665544443 4444443
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.93 E-value=1.6e-08 Score=92.79 Aligned_cols=141 Identities=11% Similarity=0.178 Sum_probs=108.5
Q ss_pred ccccccCChHHHHHhhhH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeec-CCCCceEEEEcCC-cE
Q psy14197 17 ICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPM-GHKKEELLGVTPS-RL 93 (178)
Q Consensus 17 ~~l~~~lP~~~ik~~~~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~-g~~~p~lLGI~~~-gv 93 (178)
.-++.|+|+.+++..+.+ ++++|.+.|+++.++++.+|+++||+.++.+++||+..|.|+.. |...+.-|.|+.+ ||
T Consensus 171 ~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk~l~~l~~~~~yg~e~f~~~~~~g~~~~~~l~vg~~~GI 250 (656)
T 2j0j_A 171 VGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGI 250 (656)
T ss_dssp TTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHGGGCCTTSEEEEEEEESSSEEEEEEEEETTTEE
T ss_pred ccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCceEEeeccCCCCcccEEEEECCCCCe
Confidence 346889999999999998 99999999999999999999999999999999999999999975 3332455555555 88
Q ss_pred EEEeCCCCCeEEeeeccccccccccc-----CCceEEEEecCCC--eEEEEec-CCHHHHHHHHhhhhhHhh
Q psy14197 94 MRMELSSGDHVRTWRYDTVKAWNVNW-----EIKHMMLQLTDGN--FIFECQS-ADCKVVHEFIGGYIFLSM 157 (178)
Q Consensus 94 ~~id~~tkeil~~~~~s~i~~w~~~~-----~~~~f~l~fg~~~--~~~~~~T-~~~~~i~~Li~~Yi~l~~ 157 (178)
.....+......--.|++|.+..+.. +...+.+...... ..+.+.+ ..++.+.+||.||.-+..
T Consensus 251 ~~~~~~~~~~~~~~~f~~I~~I~~~~~~~~~~k~~~~~~~~~~~~~l~i~~~s~~~ae~~a~LidGy~rL~~ 322 (656)
T 2j0j_A 251 SYLTDKGANPTHLADFNQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVN 322 (656)
T ss_dssp EECCSSSSCCEEEECGGGEEEBCEEECSSSSCCEEEEEEESSCSSCEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEECCCCCCceecccccceeEEEEeeccccCCcceEEEEeccCCcceEEECCCchhhHHHHHhhcceeeeec
Confidence 87777666666677999999985442 1234455444333 3343433 468899999999988754
No 14
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=98.06 E-value=7.6e-05 Score=53.57 Aligned_cols=73 Identities=10% Similarity=0.131 Sum_probs=65.4
Q ss_pred ceEEEEcCCcEEEEeCCCC-CeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhhhHhh
Q psy14197 83 EELLGVTPSRLMRMELSSG-DHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYIFLSM 157 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tk-eil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi~l~~ 157 (178)
|.+|=|+.+.+.+.|+.+. ..+..|||..|+++..+. +.|.++-|.. ...|.++|.++++|.+++.++|.-|-
T Consensus 22 ~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~--~~FsFEaGRrC~tG~G~f~F~~~~~~~If~~v~~ai~a~~ 99 (103)
T 1j0w_A 22 ECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDT--TWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIA 99 (103)
T ss_dssp EEEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECS--SEEEEEECSSSSSCSEEEEEECSCHHHHHHHHHHHHHHST
T ss_pred cEEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCccC--CEEEEEeCCCCCCCCcEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 6799999999999999875 689999999999988887 8899999976 47899999999999999999987653
No 15
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=97.76 E-value=0.00041 Score=50.04 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=62.9
Q ss_pred CceEEEEcCCcEEEEeC----CCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhh
Q psy14197 82 KEELLGVTPSRLMRMEL----SSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYI 153 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~----~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi 153 (178)
.|.+|=|..+.+.+.++ ++++.+.+|||..|+++..+. +.|.++-|.. ...|.++|.+++.|.+.|..+|
T Consensus 23 G~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~--~~FsFEaGRrc~tG~G~f~F~~~~~~~If~~l~~~i 100 (107)
T 2v76_A 23 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDK--VMFSFEAGRRCPSGPGTFTFQTAQGNDIFQAVETAI 100 (107)
T ss_dssp SEEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECS--SEEEEEECTTSTTCSEEEEEECSCHHHHHHHHHHHH
T ss_pred ccEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccC--CEEEEEecCCCCCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 37899999999999974 577899999999999988877 8899999966 4789999999999999999887
Q ss_pred hH
Q psy14197 154 FL 155 (178)
Q Consensus 154 ~l 155 (178)
.-
T Consensus 101 ~~ 102 (107)
T 2v76_A 101 HR 102 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 16
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=97.75 E-value=0.00069 Score=50.28 Aligned_cols=79 Identities=11% Similarity=0.152 Sum_probs=67.9
Q ss_pred ceEEEEcCCcEEEEeC----CCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhhh
Q psy14197 83 EELLGVTPSRLMRMEL----SSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYIF 154 (178)
Q Consensus 83 p~lLGI~~~gv~~id~----~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi~ 154 (178)
|.+|=|..+.|.+.++ .+++.+.+|||..|+++..+. +.|.++-|.. ...|.++|.+++.|.+.|...|.
T Consensus 26 ~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~--~~FsFEaGRrC~tGeG~f~F~t~~~~~If~~l~~~i~ 103 (127)
T 1p5t_A 26 SYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDK--VMFSFEAGRRCPSGPGTFTFQTSQGNDIFQAVEAAIQ 103 (127)
T ss_dssp EEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECS--SEEEEEECTTSTTCSEEEEEECSCHHHHHHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccC--CEEEEEecCCCCCCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 7899999999999985 467899999999999988887 8899999976 47899999999999999999988
Q ss_pred Hhhhccccc
Q psy14197 155 LSMRSKDAN 163 (178)
Q Consensus 155 l~~~~~~~~ 163 (178)
-...+.+..
T Consensus 104 ~~k~~~~~~ 112 (127)
T 1p5t_A 104 QQKAQGKVG 112 (127)
T ss_dssp HHHTTCC--
T ss_pred HHHhcCCcC
Confidence 777654433
No 17
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.61 E-value=0.00018 Score=52.42 Aligned_cols=75 Identities=12% Similarity=0.093 Sum_probs=67.3
Q ss_pred CceEEEEcCCcEEE-EeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhhhHh
Q psy14197 82 KEELLGVTPSRLMR-MELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYIFLS 156 (178)
Q Consensus 82 ~p~lLGI~~~gv~~-id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi~l~ 156 (178)
.|.+|=|..+.+.+ .++.++..+.+|||.-|+++..+. +.|.++-|.. ...|.++|.+++.|-+.|..+|.-.
T Consensus 28 G~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~d~--~~FsfEaGRrC~tGeG~f~F~t~~~~~if~~l~~~i~~~ 105 (113)
T 2dlw_A 28 GSYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRDK--VTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISAQ 105 (113)
T ss_dssp SEEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEEET--TEEEEEECSSCSSCSEEEEECCSTHHHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCccC--CEEEEEecCCCCCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 38899999999999 699999999999999999988887 8899999976 4789999999999999999988765
Q ss_pred hh
Q psy14197 157 MR 158 (178)
Q Consensus 157 ~~ 158 (178)
..
T Consensus 106 ~~ 107 (113)
T 2dlw_A 106 KN 107 (113)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 18
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.40 E-value=0.0035 Score=50.58 Aligned_cols=82 Identities=10% Similarity=0.100 Sum_probs=67.7
Q ss_pred eEEEEeec-CC---CCceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCH
Q psy14197 71 TLFVIKPM-GH---KKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADC 142 (178)
Q Consensus 71 tfF~Vk~~-g~---~~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~ 142 (178)
.=|.|... +. ..|..|-|+.+.+.+.+..+..++..||++.|+++..+. +.|.++-|.. ..-|.++|.++
T Consensus 116 ~rF~V~v~Ps~kL~sG~a~Lhl~~~~l~L~~~~~~~~l~~W~L~~LRRYG~~~--~~F~FE~grrC~~geG~f~f~t~qg 193 (224)
T 3ml4_A 116 HRFHVTVAPGTKLESGPATLHLCNDILVLARDIPPTVMGQWKLSDLRRYGAVP--NGFIFEGGTRCGYWAGVFFLSSAEG 193 (224)
T ss_dssp EEEEEEECSSSSSCCEEEEEEEETTEEEEEETTTTEEEEEEEGGGEEEEEEET--TEEEEEECGGGGGGCEEEEEECSCH
T ss_pred ceEEEEecCccccCCCcEEEEecCCcEEEccCCCccEEEEcchHHhhhhcccC--CEeEEecCCcCCCCCCEEEEecCcH
Confidence 55666542 22 237899999999999999999999999999999988777 7899988866 47899999999
Q ss_pred HHHHHHHhhhhh
Q psy14197 143 KVVHEFIGGYIF 154 (178)
Q Consensus 143 ~~i~~Li~~Yi~ 154 (178)
++|.+|...-+.
T Consensus 194 e~I~~lfd~~~r 205 (224)
T 3ml4_A 194 EQMSFLFDCIVR 205 (224)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc
Confidence 999998865443
No 19
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=97.37 E-value=0.0016 Score=49.26 Aligned_cols=92 Identities=10% Similarity=0.165 Sum_probs=71.0
Q ss_pred eEEEEeec-CCC---CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCH
Q psy14197 71 TLFVIKPM-GHK---KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADC 142 (178)
Q Consensus 71 tfF~Vk~~-g~~---~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~ 142 (178)
.-|.|... ... .+..|=|+.+.|++.+.+ ..+..|||..|+++..+. +.|.++-|.. ...|.++|.++
T Consensus 19 ~~F~V~v~~~~~~e~G~~~L~Lt~~~L~L~~~~--~~~~~WPy~~LRRYG~d~--~~FsFEaGRrC~tGeGiF~F~t~~~ 94 (146)
T 2kup_A 19 TKFKVTNVDDEGVELGSGVMELTQSELVLHLHR--REAVRWPYLCLRRYGYDS--NLFSFESGRRCQTGQGIFAFKCSRA 94 (146)
T ss_dssp SEEEEEEECTTCCEEEEEEEEECSSCEEEECSS--SCCEEECGGGCSCEEEET--TEEEEEECTTSSSCSEEEEEECTTH
T ss_pred CEEEEEEeCCCCCcceeEEEEEccCEEEEEcCC--CCeeEcCHHHhhhcCccC--CEEEEEcCCCCCCCCCEEEEEcCCH
Confidence 34666542 222 267899999999999865 447799999999998887 8899999976 47899999999
Q ss_pred HHHHHHHhhhhhHhhhcccccccc
Q psy14197 143 KVVHEFIGGYIFLSMRSKDANQTL 166 (178)
Q Consensus 143 ~~i~~Li~~Yi~l~~~~~~~~q~~ 166 (178)
++|.+++..+|.-.+-+....+.+
T Consensus 95 e~If~~l~~~iq~~~~~~~~~p~~ 118 (146)
T 2kup_A 95 EEIFNLLQDLMQCNSINVMEEPVI 118 (146)
T ss_dssp HHHHHHHHHHHTTCCTTCSCCCCC
T ss_pred HHHHHHHHHHHhcCccccccCCcc
Confidence 999999998886555554444444
No 20
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A
Probab=97.26 E-value=0.0029 Score=48.18 Aligned_cols=69 Identities=10% Similarity=0.191 Sum_probs=60.7
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhhhH
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYIFL 155 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi~l 155 (178)
|.+|=|+.+.+++.++.++ +..|||..|+++..+. +.|.++-|.. ...|.+.|.++++|.+++..+|.-
T Consensus 35 ~~~L~lt~~~L~L~~~~~~--~~~WPy~~LRRYG~d~--~~FsFEaGRRC~tGeGiF~F~t~~~e~If~~l~~~iq~ 107 (153)
T 2kuq_A 35 SGVMELTQSELVLHLHRRE--AVRWPYLCLRRYGYDS--NLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQC 107 (153)
T ss_dssp EEEEEECSSCEEEECSSSC--CEEECGGGEEEEEEET--TEEEEEECTTSTTCSEEEEEECTTHHHHHHHHHHHHHS
T ss_pred eEEEEEcCCEEEEEeCCCC--ceEccHHHhhhcCccC--CEEEEECCCCCCCCCcEEEEEcCCHHHHHHHHHHHHhc
Confidence 6799999999999999875 4599999999998888 8899999976 478999999999999999987653
No 21
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2
Probab=97.26 E-value=0.0052 Score=45.59 Aligned_cols=88 Identities=9% Similarity=0.129 Sum_probs=69.4
Q ss_pred eEEEEee-cCC---CCceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCH
Q psy14197 71 TLFVIKP-MGH---KKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADC 142 (178)
Q Consensus 71 tfF~Vk~-~g~---~~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~ 142 (178)
.-|.|.. ..+ -.|..|=|+.+.+++.+++. .+..|||..|+++..+. +.|.++-|.. ...|.+.|.++
T Consensus 12 ~~F~V~~~~~~~~e~g~~~L~lt~~~L~L~~~~~--~~~~Wp~~~LRrYG~d~--~~FsFEaGRRC~tGeGiF~F~t~~~ 87 (129)
T 1xr0_B 12 NKFKVINVDDDGNELGSGIMELTDTELILYTRKR--DSVKWHYLCLRRYGYDS--NLFSFESGRRCQTGQGIFAFKCARA 87 (129)
T ss_dssp CEEEEEEECSSCCCCCCEEEEECSSCEEEEETTT--EEEEECSTTEEEEEECS--SEEEEEECSCSTTCSEEEEEECSCH
T ss_pred CEEEEEEeCCCCCcceeEEEEEecCEEEEEeCCC--CeeEcchHHhhhcCccC--CEEEEEcCCCCCCCCcEEEEEcCCH
Confidence 4466654 222 13789999999999997544 46799999999999887 8899998866 47899999999
Q ss_pred HHHHHHHhhhhhHhhhcccc
Q psy14197 143 KVVHEFIGGYIFLSMRSKDA 162 (178)
Q Consensus 143 ~~i~~Li~~Yi~l~~~~~~~ 162 (178)
++|.+++..++.-.+-+...
T Consensus 88 ~~If~~l~~~i~~~s~s~~~ 107 (129)
T 1xr0_B 88 EELFNMLQEIMQNNSINVVE 107 (129)
T ss_dssp HHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHhccCccccc
Confidence 99999999998765554433
No 22
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=97.25 E-value=0.0024 Score=48.50 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=66.0
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCc---eEEEEecCC------CeEEEEecCCHHHHHHHHhhh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIK---HMMLQLTDG------NFIFECQSADCKVVHEFIGGY 152 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~---~f~l~fg~~------~~~~~~~T~~~~~i~~Li~~Y 152 (178)
++.+|=|+.+.|-++||.|+..|..+|+..|+=|.++.+.. -|.+...+. -..|.|+ ..++.|++-+..+
T Consensus 55 q~~~L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe-~~a~~Ia~al~~~ 133 (148)
T 3d8d_A 55 KDLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCE-APAKNIATSLHEI 133 (148)
T ss_dssp CEEEEEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEES-SCHHHHHHHHHHH
T ss_pred ceEEEEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcC-CchHHHHHHHHHH
Confidence 46799999999999999999999999999999999988552 377766555 1568887 7899999999999
Q ss_pred hhHhhhccc
Q psy14197 153 IFLSMRSKD 161 (178)
Q Consensus 153 i~l~~~~~~ 161 (178)
...+|...+
T Consensus 134 c~~~~~~~~ 142 (148)
T 3d8d_A 134 CSKIMAELE 142 (148)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHh
Confidence 999887543
No 23
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=96.77 E-value=0.014 Score=47.95 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=65.8
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC----CeEEEEecCCHHHHHHHHhhhhhHhhh
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG----NFIFECQSADCKVVHEFIGGYIFLSMR 158 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~----~~~~~~~T~~~~~i~~Li~~Yi~l~~~ 158 (178)
+-.|-+..+.|.++++.++..+.+|||..|+++.... +.|.++.|-. ...|.++|.+ ..|.+-|..-|---|+
T Consensus 179 ~y~l~l~~~~l~L~~~~~~~~~~~wpl~~lRr~G~~~--~~F~fEaGR~c~~G~G~f~f~t~~-~~i~~~i~~~i~~~~~ 255 (264)
T 1qqg_A 179 IYRLCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSE--NFFFIEVGRSAVTGPGEFWMQVDD-SVVAQNMHETILEAMR 255 (264)
T ss_dssp EEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEET--TEEEEEECTTSTTCSEEEEEECSC-HHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCcEEEEEecCCCcceEEeehhheecccccC--cEEEEEecCCCCCCCcEEEEecCc-HHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999987665 8999999976 4789999999 6788888777777777
Q ss_pred cccc
Q psy14197 159 SKDA 162 (178)
Q Consensus 159 ~~~~ 162 (178)
+++.
T Consensus 256 ~~~~ 259 (264)
T 1qqg_A 256 AMSD 259 (264)
T ss_dssp GGGC
T ss_pred HHHH
Confidence 7553
No 24
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=96.57 E-value=0.018 Score=44.05 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=59.4
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeeccccccccccc-CCceEEEEecCC------CeEEEEecCCHHHHHHHHhhhhh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNW-EIKHMMLQLTDG------NFIFECQSADCKVVHEFIGGYIF 154 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~-~~~~f~l~fg~~------~~~~~~~T~~~~~i~~Li~~Yi~ 154 (178)
.+..|-|+.+||.++|++|++++..+|+..|.-+..+. +.+.|-.-..+. -..|.|....++.|..-|+.=..
T Consensus 78 ~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~~~~~~~CHvF~c~~~~A~~I~~aIgqAF~ 157 (168)
T 3f0w_A 78 VKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCAFA 157 (168)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEETTTTEEEEEEEEESSSCHHHHHHHHHHHHH
T ss_pred cEEEEEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecCCCCcEEEEEEEeccchHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999875 344565444443 24555554458888888877666
Q ss_pred Hhhhcc
Q psy14197 155 LSMRSK 160 (178)
Q Consensus 155 l~~~~~ 160 (178)
.....+
T Consensus 158 ~a~~~k 163 (168)
T 3f0w_A 158 ACLERK 163 (168)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 655543
No 25
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=95.94 E-value=0.049 Score=40.93 Aligned_cols=78 Identities=6% Similarity=-0.012 Sum_probs=59.3
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccC-CceEEEEecCC--CeEEEEecC-CHHHHHHHHhhhhhHhh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWE-IKHMMLQLTDG--NFIFECQSA-DCKVVHEFIGGYIFLSM 157 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~-~~~f~l~fg~~--~~~~~~~T~-~~~~i~~Li~~Yi~l~~ 157 (178)
.+..|-|+.+||.++|++|++++..+|+..|.=...+.. .+.|-.-..+. ..++.+++. .++.|...|+.=..+..
T Consensus 61 ~~v~L~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~~~~h~f~v~~s~~~A~~I~~tigqAF~~ay 140 (152)
T 1ntv_A 61 QKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQLIY 140 (152)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCCEEEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCeEEEEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEcCCeEEEEEEccHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999998887653 34666555555 234444665 78888888877766654
Q ss_pred hc
Q psy14197 158 RS 159 (178)
Q Consensus 158 ~~ 159 (178)
+.
T Consensus 141 ~~ 142 (152)
T 1ntv_A 141 EL 142 (152)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 26
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=95.91 E-value=0.075 Score=40.83 Aligned_cols=73 Identities=12% Similarity=0.082 Sum_probs=54.7
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC------------------------CeEEEE
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG------------------------NFIFEC 137 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~------------------------~~~~~~ 137 (178)
.+..|-|+.+||.++|++|++++..+|+..|.=|+-+. +.|..--.+. -.++.+
T Consensus 64 ~~V~L~IS~~gikv~d~~t~~il~~~~l~~ISf~aD~~--~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF 141 (172)
T 1aqc_A 64 TEVDLFILTQRIKVLNADTQETMMDHPLRTISYIADIG--NIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVF 141 (172)
T ss_dssp CEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEEET--TEEEEEECCC----------------------CEEEEEEE
T ss_pred cEEEEEEECCeEEEEeCCCCceEeccccceEEEEeeCC--cEEEEEecCCCccccccccccccccccccCCCCcEEEEEE
Confidence 47899999999999999999999999999999997333 5555443332 145666
Q ss_pred ecCCHHHHHHHHhhhhhHh
Q psy14197 138 QSADCKVVHEFIGGYIFLS 156 (178)
Q Consensus 138 ~T~~~~~i~~Li~~Yi~l~ 156 (178)
++..++.|..-|+.=..+.
T Consensus 142 ~s~~A~~I~~tIGqAF~~a 160 (172)
T 1aqc_A 142 ESEDAQLIAQSIGQAFSVA 160 (172)
T ss_dssp ECTTHHHHHHHHHHHHHHH
T ss_pred ECccHHHHHHHHHHHHHHH
Confidence 7766888887776555543
No 27
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=95.22 E-value=0.16 Score=36.88 Aligned_cols=76 Identities=8% Similarity=0.022 Sum_probs=53.9
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeeccccccccccc-CCceEEEEecCC-C---eEEEEecC---CHHHHHHHHhhhh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNW-EIKHMMLQLTDG-N---FIFECQSA---DCKVVHEFIGGYI 153 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~-~~~~f~l~fg~~-~---~~~~~~T~---~~~~i~~Li~~Yi 153 (178)
.+..|-|+.+||.++|++|++++..+|+..|.-|..+. +.+.|-.-..+. . .+..+.+. +++.|...|+.-.
T Consensus 44 ~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~l~~AF 123 (137)
T 3so6_A 44 QKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAF 123 (137)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECSSSSCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999865 445665554444 1 33334443 4666666665544
Q ss_pred hHhh
Q psy14197 154 FLSM 157 (178)
Q Consensus 154 ~l~~ 157 (178)
.+..
T Consensus 124 ~~a~ 127 (137)
T 3so6_A 124 KVAF 127 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 28
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=95.20 E-value=0.11 Score=39.22 Aligned_cols=77 Identities=14% Similarity=0.103 Sum_probs=56.8
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCC-ceEEEEecCC---------CeEEEEecC-CHHHHHHHHh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEI-KHMMLQLTDG---------NFIFECQSA-DCKVVHEFIG 150 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~-~~f~l~fg~~---------~~~~~~~T~-~~~~i~~Li~ 150 (178)
.+..|-|+.+||.++|++|++++..+|+..|.=|..+.+. +.|-.-..+. -.++.+++. .++.|..-|+
T Consensus 57 ~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tig 136 (160)
T 2ej8_A 57 TESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVG 136 (160)
T ss_dssp CEEEEEEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHHHH
T ss_pred CEEEEEEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHHHH
Confidence 3578999999999999999999999999999999988742 3454444332 234444553 7888888887
Q ss_pred hhhhHhhh
Q psy14197 151 GYIFLSMR 158 (178)
Q Consensus 151 ~Yi~l~~~ 158 (178)
.=..+..+
T Consensus 137 qAF~~ay~ 144 (160)
T 2ej8_A 137 LAKQIALH 144 (160)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 29
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=94.90 E-value=0.12 Score=39.19 Aligned_cols=76 Identities=4% Similarity=-0.011 Sum_probs=57.3
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccC-CceEEEEecCC--CeEEEEec-CCHHHHHHHHhhhhhHhhh
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWE-IKHMMLQLTDG--NFIFECQS-ADCKVVHEFIGGYIFLSMR 158 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~-~~~f~l~fg~~--~~~~~~~T-~~~~~i~~Li~~Yi~l~~~ 158 (178)
+..|-|+.+||.++|++|++++..+|+..|.-...+.. .+.|-.-..+. ..++.+++ ..++.|...|+.=..+..+
T Consensus 61 ~V~L~IS~~GI~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~~~h~c~vf~s~~~A~~I~~tigqAF~~ay~ 140 (160)
T 1p3r_A 61 RIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIYN 140 (160)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCEEEEEEEESSCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCeEEEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecCCEEEEEEEccHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998887663 34565555555 24555566 3678888777666555444
No 30
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=94.70 E-value=0.14 Score=39.42 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=54.9
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCC-ceEEEEecCC---------CeEEEEecC-CHHHHHHHHhh
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEI-KHMMLQLTDG---------NFIFECQSA-DCKVVHEFIGG 151 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~-~~f~l~fg~~---------~~~~~~~T~-~~~~i~~Li~~ 151 (178)
+..|-|+.+||.++|++|++++..+|+..|.=|+.+.++ +.|-.-..+. -.++.+++. .++.|..-|+.
T Consensus 71 ~V~L~VS~~gI~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tIgq 150 (175)
T 2ela_A 71 ESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGL 150 (175)
T ss_dssp EEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHHHHH
T ss_pred EEEEEEECCeEEEEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHHHHH
Confidence 578999999999999999999999999999999988742 3454444432 234444553 78888877765
Q ss_pred hhhHh
Q psy14197 152 YIFLS 156 (178)
Q Consensus 152 Yi~l~ 156 (178)
=..+.
T Consensus 151 AF~~a 155 (175)
T 2ela_A 151 AKQIA 155 (175)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 31
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=94.70 E-value=0.36 Score=36.58 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=55.5
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-------CeEEEEecCCHHHHHHHHhhhhh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-------NFIFECQSADCKVVHEFIGGYIF 154 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-------~~~~~~~T~~~~~i~~Li~~Yi~ 154 (178)
.+..|-|+.+||.++|++|++++..+++..|.-...+. +.|..--.+. -.++.+++..++.|...|+.=..
T Consensus 53 ~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~~--~~f~fIar~~~~~~~~~~~CHVF~~~~A~~I~~tigqAF~ 130 (162)
T 4dbb_A 53 TEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIG--NIVVLMARRRMPRSQYKMICHVFESEDAQLIAQSIGQAFS 130 (162)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEEEET--TEEEEEEEECCSTTCEEEEEEEEECTTHHHHHHHHHHHHH
T ss_pred cEEEEEEECCEEEEEECCCCcEEeeeecceeEEEEECC--CEEEEEeccCCCCCCCcEEEEEEECCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999877554 5565433331 14555566668888887765555
Q ss_pred Hhhh
Q psy14197 155 LSMR 158 (178)
Q Consensus 155 l~~~ 158 (178)
+..+
T Consensus 131 ~ay~ 134 (162)
T 4dbb_A 131 VAYQ 134 (162)
T ss_dssp HHHG
T ss_pred HHHH
Confidence 4443
No 32
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=94.47 E-value=0.28 Score=36.72 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=57.0
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccc-c---CCceEEEEecCC------CeEEEEecCCHHHHHHHHhhh
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVN-W---EIKHMMLQLTDG------NFIFECQSADCKVVHEFIGGY 152 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~-~---~~~~f~l~fg~~------~~~~~~~T~~~~~i~~Li~~Y 152 (178)
+.+|=|+..+|.++|+.||+.+..||++.|.+-.+- + -.+-+.+...+. -..|-|....++.|.+=|.++
T Consensus 50 ~m~L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av~~~~~y~siLllv~q~~~~~~~~iH~FQc~ev~A~~v~~di~~a 129 (140)
T 2cy5_A 50 EMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDIQGA 129 (140)
T ss_dssp EEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHHHHH
T ss_pred eeEEEECCCeEEEEccCccchhhcCChhhceeccccCCccccCcEEEEEEecCCCCCccEEEEEeccccHHHHHHHHHHH
Confidence 569999999999999999999999999999997432 2 123355555433 267878878888888888877
Q ss_pred hhHhhh
Q psy14197 153 IFLSMR 158 (178)
Q Consensus 153 i~l~~~ 158 (178)
+.=+-.
T Consensus 130 l~~~~~ 135 (140)
T 2cy5_A 130 LQNYRS 135 (140)
T ss_dssp HHHHC-
T ss_pred HHHhhc
Confidence 754433
No 33
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=93.50 E-value=0.066 Score=36.95 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=25.3
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhc-CCCCc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQS-LPDYG 69 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~-lp~fG 69 (178)
..+++++.|||.+||+..||+++.+ .|.||
T Consensus 58 w~AW~~l~gms~eeA~~~YI~~v~~l~~~~~ 88 (89)
T 1hbk_A 58 YEAWKSVENLNREDAQKRYVDIVSEIFPYWQ 88 (89)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHCTTTT
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHccccc
Confidence 6789999999999999999999954 45554
No 34
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=93.17 E-value=0.06 Score=37.83 Aligned_cols=30 Identities=20% Similarity=0.429 Sum_probs=25.2
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhc-CCCCc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQS-LPDYG 69 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~-lp~fG 69 (178)
..+++++.|||.+||+.+||+++.. .|.||
T Consensus 65 w~AW~~l~gmS~eeAm~~YI~lv~~l~~~~~ 95 (96)
T 2lbb_A 65 WEAWNALRGMSTESAKEAYVKLLDTLAPSWR 95 (96)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhchhc
Confidence 6789999999999999999999954 45554
No 35
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=93.02 E-value=0.23 Score=39.25 Aligned_cols=68 Identities=12% Similarity=-0.011 Sum_probs=49.8
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccc-cccC-CceEEEEecCC---CeEEEEecC--CHHHHHHHH
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWN-VNWE-IKHMMLQLTDG---NFIFECQSA--DCKVVHEFI 149 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~-~~~~-~~~f~l~fg~~---~~~~~~~T~--~~~~i~~Li 149 (178)
.+..|-|+.+||.++|++|++++..+|+..|.-.+ ...+ .+.|-.-..+. -.++.+++. .++.|...|
T Consensus 120 ~~V~L~IS~~gIkv~d~~t~~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~~~~~CHVF~cs~~~A~~I~~tI 194 (207)
T 1n3h_A 120 MPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTI 194 (207)
T ss_dssp EEEEEEEETTEEEEEETTTTSCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSSSCCEEEEEECSSSTHHHHHHCC
T ss_pred ceEEEEEECCeEEEEeCCCCceeeeeccceEEEEeccCCCcCCEEEEEecCCCCCEEEEEEEcCHHHHHHHHHHH
Confidence 36799999999999999999999999999999877 3333 36676666654 255565543 355555444
No 36
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=92.87 E-value=0.065 Score=36.87 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.3
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhcC
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQSL 65 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~l 65 (178)
..+++++.|||.+||+..||+++..+
T Consensus 56 w~AW~~l~gms~eeA~~~Yi~~v~~l 81 (87)
T 2cb8_A 56 WDAWNELKGTSKEDAMKAYINKVEEL 81 (87)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 67899999999999999999998653
No 37
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=92.52 E-value=0.077 Score=36.69 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=25.0
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhc-CCCCc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQS-LPDYG 69 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~-lp~fG 69 (178)
..+++++.|||.+|||..||+++.+ .|.||
T Consensus 58 w~AW~~l~g~s~eeA~~~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 58 WEAWNLKKGLSTEDATSAYISKAKELIEKYG 88 (89)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHhhhhc
Confidence 5688999999999999999999965 34554
No 38
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.058 Score=37.00 Aligned_cols=26 Identities=31% Similarity=0.346 Sum_probs=23.2
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhcC
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQSL 65 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~l 65 (178)
..+++++.|||.+|||..||+++.++
T Consensus 55 w~AW~~l~gms~eeA~~~YI~~v~~l 80 (86)
T 1st7_A 55 WEAWENLKGKSQEDAEKEYIALVDQL 80 (86)
T ss_dssp HHHHHTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 67899999999999999999998653
No 39
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=92.25 E-value=0.085 Score=37.70 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=23.4
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhcC
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQSL 65 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~l 65 (178)
..+++++.|||.+|||.+||+++.++
T Consensus 66 w~AW~~l~gms~eeA~~~YI~~v~~l 91 (106)
T 2wh5_A 66 WDAWNSLGKMSREEAMSAYITEMKLV 91 (106)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 67899999999999999999998753
No 40
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.92 E-value=0.097 Score=37.54 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=26.3
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhcC-CCCce
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQSL-PDYGL 70 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~l-p~fG~ 70 (178)
..+++++.|||.+|||..||+++..+ |.|+.
T Consensus 62 w~AW~~l~gms~eeAm~~YI~lv~~l~~~~~~ 93 (109)
T 2cop_A 62 WEAWKALGDSSPSQAMQEYIAVVKKLDPGWNP 93 (109)
T ss_dssp HHHHHSCTTCCHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhhhhcc
Confidence 67899999999999999999999654 55654
No 41
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=90.84 E-value=0.13 Score=37.48 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=22.5
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQS 64 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~ 64 (178)
+.|++++.|||.+|||..||+++.+
T Consensus 82 w~AW~~l~gmS~eeAm~~YI~~v~~ 106 (119)
T 3flv_A 82 WDAWSSLGDMTKEEAMIAYVEEMKK 106 (119)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999854
No 42
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.79 E-value=0.12 Score=37.48 Aligned_cols=30 Identities=23% Similarity=0.327 Sum_probs=24.9
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhcC-CCCc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQSL-PDYG 69 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~l-p~fG 69 (178)
..+++++.|||.+|||..||+++.++ |.|+
T Consensus 70 w~AW~~l~gms~eeAm~~YI~lv~~l~~~~~ 100 (116)
T 2cqu_A 70 WDAWNALGSLPKEAARQNYVDLVSSLSPSLE 100 (116)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHccccc
Confidence 67888999999999999999999554 4444
No 43
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=90.27 E-value=0.18 Score=36.03 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=22.7
Q ss_pred HHHHhccCCCChhHHHHHHHHHHhc
Q psy14197 40 LEAHANVKDLGLTEAKLSYIRAWQS 64 (178)
Q Consensus 40 ~~~h~~~~~ls~~eAK~~yLk~~~~ 64 (178)
..+++++.|||.+|||..||+++..
T Consensus 62 w~AW~~l~gmS~eeA~~~YI~~v~~ 86 (106)
T 3fp5_A 62 WDAWKSVEGTSKEVAYQKYVEKLLE 86 (106)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999864
No 44
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=85.77 E-value=6.3 Score=33.49 Aligned_cols=69 Identities=13% Similarity=0.125 Sum_probs=47.7
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC------------------------CeEEEEe
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG------------------------NFIFECQ 138 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~------------------------~~~~~~~ 138 (178)
++-|-|+.+||.++|++|++++..+++..|.=- .+ ..+.|.+--.+. ..|+.++
T Consensus 67 ~v~l~IS~~gi~v~~~~t~~~~~~~~l~~IS~~-~d-~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ChvF~ 144 (388)
T 3suz_A 67 EVDLFISTQRIKVLNADTQETMMDHALRTISYI-AD-IGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFE 144 (388)
T ss_dssp EEEEEECSSEEEEEETTTCCEEEEEEGGGEEEE-EE-CSSEEEEEEEECCCCCC-------------CCCCEEEEEEEEE
T ss_pred eEEEEEEeceEEEEecCCcChhhhccccceeEE-ee-cCceEEEEEecCCCccccccccccCccccccccccceEEEEec
Confidence 579999999999999999999999998877643 11 113333222221 1278888
Q ss_pred cCCHHHHHHHHhhhh
Q psy14197 139 SADCKVVHEFIGGYI 153 (178)
Q Consensus 139 T~~~~~i~~Li~~Yi 153 (178)
+.+...|.+-|+.=+
T Consensus 145 s~~a~~i~~ti~qaf 159 (388)
T 3suz_A 145 SEDAQLIAQSIGQAF 159 (388)
T ss_dssp CTTHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 877888877775433
No 45
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=84.89 E-value=2.5 Score=31.37 Aligned_cols=75 Identities=13% Similarity=0.248 Sum_probs=53.4
Q ss_pred CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-----CeEEEEecCCHHHHHHHHhhhhhHh
Q psy14197 82 KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-----NFIFECQSADCKVVHEFIGGYIFLS 156 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-----~~~~~~~T~~~~~i~~Li~~Yi~l~ 156 (178)
.|..|-|+..||.+.|.+|++++...+...|.=-.++.+.+.|..=..+. -..|.|+.+ ...+.+-++.=..+.
T Consensus 46 ~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~ISFcg~~kd~k~FafI~~~~~~~f~CHvF~c~~~-A~~vs~aV~~Af~l~ 124 (140)
T 3dxe_A 46 TPSHVSVAPATLTILHQQTEAVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPN-AASLSEAVQAACMLR 124 (140)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSTTEEEEEEEEETTEEEEEEEEEESC-SHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCEEEEEecCCcceeeeccEEEEeeeccCCCCcEEEEEecCCCccEEEEEEecCcc-hHHHHHHHHHHHHHH
Confidence 36899999999999999999999999988888777877667664333322 256666654 446666665544443
Q ss_pred h
Q psy14197 157 M 157 (178)
Q Consensus 157 ~ 157 (178)
.
T Consensus 125 Y 125 (140)
T 3dxe_A 125 Y 125 (140)
T ss_dssp H
T ss_pred H
Confidence 3
No 46
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=78.39 E-value=10 Score=28.17 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=51.9
Q ss_pred CceEEEEcCCcEEEEeC-----CCCCeEEeeecccccccccccCCceEEEEecCCC-----eEEEEecCCHHHHHHHHhh
Q psy14197 82 KEELLGVTPSRLMRMEL-----SSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGN-----FIFECQSADCKVVHEFIGG 151 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~-----~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~~-----~~~~~~T~~~~~i~~Li~~ 151 (178)
.|..|-|+..||..+|+ .|++++..-+...|.=+.++.+.+.|-+=..... ..|.|+.+ ...+.+-|+.
T Consensus 54 ~~v~l~Vs~~~i~v~~~~~~~~~~~~~l~~c~vr~ISFcgvgkd~r~FaFI~~~~~~~f~CHVF~ce~~-A~~ls~aV~~ 132 (144)
T 2dyq_A 54 VPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPH-AGGLSEAVQA 132 (144)
T ss_dssp EEEEEEECSSEEEEEECC------CCCSSEEEGGGEEEEEECSSTTEEEEEEECSSSCEEEEEEECSSC-THHHHHHHHH
T ss_pred cceEEEEeccceEEeccccccccccceeeeceEEEEeeeecCCCCcEEEEEEeCCCCcEEEEEEecCCc-hHHHHHHHHH
Confidence 37899999999999998 4999999999999999999887776644433332 45555543 3336666655
Q ss_pred hhhHh
Q psy14197 152 YIFLS 156 (178)
Q Consensus 152 Yi~l~ 156 (178)
=..+.
T Consensus 133 Ac~l~ 137 (144)
T 2dyq_A 133 ACMVQ 137 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 47
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=75.64 E-value=8.1 Score=28.34 Aligned_cols=70 Identities=13% Similarity=0.220 Sum_probs=50.7
Q ss_pred CceEEEEcCCcEEEEeCCC-CCeEEeeecccccccccccCCceEEEEecCCC-----eEEEEecCCHHHHHHHHhhh
Q psy14197 82 KEELLGVTPSRLMRMELSS-GDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGN-----FIFECQSADCKVVHEFIGGY 152 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~t-keil~~~~~s~i~~w~~~~~~~~f~l~fg~~~-----~~~~~~T~~~~~i~~Li~~Y 152 (178)
.|..|-|+..||.+.|.++ ++++...++..|.=-.++.+.+.|.+=..+.. ..|.|+. ....+.+-|+.=
T Consensus 54 ~~v~l~Vs~~gi~v~~~~~~~~~l~~~~l~~ISFc~~d~~~k~FaFI~~~~~~~f~CHvF~c~~-~A~~vs~aV~~A 129 (136)
T 1wgu_A 54 PSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEP-NAANVSEAVQAA 129 (136)
T ss_dssp CEEEEEEETTEEEEECSSCSSCEEEEEETTTEEEEEECSSTTCEEEEEECSSSCEEEEEEECSS-CTHHHHHHHHHH
T ss_pred ceEEEEEccCEEEEEecCCCCceeccceEEEeeeEecCCCCcEEEEEEcCCCccEEEEEEEcCc-chHHHHHHHHHH
Confidence 4689999999999999998 59999999998888888776676655544442 3444443 355566666543
No 48
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=73.53 E-value=10 Score=29.41 Aligned_cols=76 Identities=12% Similarity=0.150 Sum_probs=55.0
Q ss_pred CceEEEEcCCcEEEEeCCC-CCeEEeeecccccccccccCCceEEEEecCCC-----eEEEEecCCHHHHHHHHhhhhhH
Q psy14197 82 KEELLGVTPSRLMRMELSS-GDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGN-----FIFECQSADCKVVHEFIGGYIFL 155 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~t-keil~~~~~s~i~~w~~~~~~~~f~l~fg~~~-----~~~~~~T~~~~~i~~Li~~Yi~l 155 (178)
.|..|-|+.+||.++|.+| ++++...++..|.=-.++.+.+.|.+=..+.. ..|.|+.. +..|.+-|+.=+.+
T Consensus 54 ~~V~L~VS~~gI~v~d~~t~~e~l~~~~I~~ISFc~vd~d~k~FaFI~~~~~~~f~CHVF~c~k~-A~~vs~aV~~Af~l 132 (185)
T 2ysz_A 54 PSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPN-AANVSEAVQAACSG 132 (185)
T ss_dssp CEEEEEEETTEEEEEESSCSSCEEEEECTTTCCEEECCSSTTEEEEEEESSSSCEEEEEEEESSC-STTHHHHHHHHHHS
T ss_pred ceEEEEEecCEEEEEecCCCcceeeeccEEEeeeeccCCCCcEEEEEecCCCccEEEEEEEccCc-hHHHHHHHHHHHHH
Confidence 4689999999999999998 58999999998888888877776655444442 45555543 44577777655554
Q ss_pred hhh
Q psy14197 156 SMR 158 (178)
Q Consensus 156 ~~~ 158 (178)
...
T Consensus 133 ~yQ 135 (185)
T 2ysz_A 133 PSS 135 (185)
T ss_dssp CCC
T ss_pred HHH
Confidence 433
No 49
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=71.41 E-value=17 Score=26.39 Aligned_cols=70 Identities=16% Similarity=0.281 Sum_probs=48.3
Q ss_pred eEEEEcCCcEEEEeCC----CCCeEEeeeccccccccccc----C-CceEEEEecCCC--eEEEEec-CCHHHHHHHHhh
Q psy14197 84 ELLGVTPSRLMRMELS----SGDHVRTWRYDTVKAWNVNW----E-IKHMMLQLTDGN--FIFECQS-ADCKVVHEFIGG 151 (178)
Q Consensus 84 ~lLGI~~~gv~~id~~----tkeil~~~~~s~i~~w~~~~----~-~~~f~l~fg~~~--~~~~~~T-~~~~~i~~Li~~ 151 (178)
..+..+-.+++++|.. .|..+.++||+.|.+|++-. + +..+.|-++... ..+.+.- .+-+.+..+|+.
T Consensus 43 D~~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~fDlDaElki~isg~~~pi~~~f~k~~di~~i~k~La~ 122 (126)
T 3hsa_A 43 DLFVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTFDMDAELXLWISGQHEPLVXELXRGTDVVGIQXTIAR 122 (126)
T ss_dssp EEEEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTTSCEEEEEEEETTCSSCEEEEECTTSCHHHHHHHHHH
T ss_pred ceEEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccccCCceEEEEEcCCceEEEEeccCcccHHHHHHHHHH
Confidence 5777888889999864 35678899999999999553 1 123555554442 3444432 568888888888
Q ss_pred hh
Q psy14197 152 YI 153 (178)
Q Consensus 152 Yi 153 (178)
|+
T Consensus 123 ~v 124 (126)
T 3hsa_A 123 YA 124 (126)
T ss_dssp HH
T ss_pred Hh
Confidence 86
No 50
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=65.57 E-value=12 Score=28.63 Aligned_cols=45 Identities=7% Similarity=0.078 Sum_probs=37.6
Q ss_pred CceEEEEcCCcEEEEeCCC-CCeEEeeecccccccccccCCceEEE
Q psy14197 82 KEELLGVTPSRLMRMELSS-GDHVRTWRYDTVKAWNVNWEIKHMML 126 (178)
Q Consensus 82 ~p~lLGI~~~gv~~id~~t-keil~~~~~s~i~~w~~~~~~~~f~l 126 (178)
.|..|-|+..||.+.|.+| ++++...++..|.=-.++.+.+.|.+
T Consensus 100 ~~V~L~VS~~gI~v~d~~t~~evl~~c~l~~ISFcgvd~d~k~FaF 145 (176)
T 2yt0_A 100 PSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVGKDVHTFAF 145 (176)
T ss_dssp CEEEEECGGGEEEEEESSCTTCEEEEEETTTCCEEEECSSTTEEEE
T ss_pred cceEEEEcCCEEEEEecCCCcceecccceEEeeeEccCCCCcEEEE
Confidence 3689999999999999998 69999999888888778766666543
No 51
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=52.07 E-value=57 Score=27.24 Aligned_cols=73 Identities=19% Similarity=0.303 Sum_probs=47.8
Q ss_pred Cce--EEEEcC--CcEEEEeC------CCCCeEEeeecccccccc---cccCCceEEEEecCCCeEEEEecCCHHHHHHH
Q psy14197 82 KEE--LLGVTP--SRLMRMEL------SSGDHVRTWRYDTVKAWN---VNWEIKHMMLQLTDGNFIFECQSADCKVVHEF 148 (178)
Q Consensus 82 ~p~--lLGI~~--~gv~~id~------~tkeil~~~~~s~i~~w~---~~~~~~~f~l~fg~~~~~~~~~T~~~~~i~~L 148 (178)
|++ +|+|.. .|-++|+- .+=.+-.+|+|.+|+... .+. ..|.|+| +..|-.++...++=..+
T Consensus 135 K~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~~~~--~gF~LTl---~K~YyW~A~s~kER~~F 209 (320)
T 3a58_A 135 KKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEIS--EGFILTM---SKKYYWETNSAKERTVF 209 (320)
T ss_dssp EEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECSSCT--TEEEEES---SSEEEEEESSHHHHHHH
T ss_pred CceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcccCCC--CceEEEe---CCceEEecCCHHHHHHH
Confidence 354 667777 55555542 222688999999999977 344 7799988 33466677666665556
Q ss_pred HhhhhhHhhhc
Q psy14197 149 IGGYIFLSMRS 159 (178)
Q Consensus 149 i~~Yi~l~~~~ 159 (178)
|.+-+.++.+-
T Consensus 210 I~sLvKiy~KY 220 (320)
T 3a58_A 210 IKSLITLYIQT 220 (320)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666665543
No 52
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=50.87 E-value=62 Score=23.58 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=32.3
Q ss_pred ceEEEEcCCcEEEEeCCCCC-eEEeeecccccccccccC
Q psy14197 83 EELLGVTPSRLMRMELSSGD-HVRTWRYDTVKAWNVNWE 120 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tke-il~~~~~s~i~~w~~~~~ 120 (178)
+.-|=|+.+||.+.|+.+|. .-..||++.|.-=+.+++
T Consensus 41 ~vh~kVS~qGItLtD~~rk~ffRrhypl~~VsfCa~dP~ 79 (134)
T 1wvh_A 41 IVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQ 79 (134)
T ss_dssp EEEEEEETTEEEEEESSSCSSCEEEEEGGGEEEEEECTT
T ss_pred EEEEEEEcCCCeEEccCcceEEEEecccCcEEEecCCcc
Confidence 56888999999999999997 578999998877777665
No 53
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=46.87 E-value=55 Score=25.45 Aligned_cols=75 Identities=8% Similarity=0.152 Sum_probs=46.4
Q ss_pred eEEEEcCCcEEEEeC----CCCCeEEeeecc--cccccccccC-----CceEEEEecCCCeEEEEecCCHHHHHHHHhhh
Q psy14197 84 ELLGVTPSRLMRMEL----SSGDHVRTWRYD--TVKAWNVNWE-----IKHMMLQLTDGNFIFECQSADCKVVHEFIGGY 152 (178)
Q Consensus 84 ~lLGI~~~gv~~id~----~tkeil~~~~~s--~i~~w~~~~~-----~~~f~l~fg~~~~~~~~~T~~~~~i~~Li~~Y 152 (178)
..+.++-.+++++|. -.|..+.++||+ .|.+|++-.. +..+.|-++.....+.+.-.+...|.+|...-
T Consensus 39 D~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtfDlDaElki~i~~~~~~Ief~K~~~~di~~lyk~L 118 (193)
T 3b77_A 39 DEYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTVDLDVEIKFEIGGKHYSIDVDKKQLEHVKDLYKAL 118 (193)
T ss_dssp EEEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSSCCEEEEEEEETTEEEEEEEEGGGHHHHHHHHHHH
T ss_pred eEEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEecceeccCccEEEEEcCceEEEEeCCcchhhHHHHHHHH
Confidence 367788888888884 345788899999 9999975441 12244444443333444445566776665544
Q ss_pred hhHhhh
Q psy14197 153 IFLSMR 158 (178)
Q Consensus 153 i~l~~~ 158 (178)
..+...
T Consensus 119 ~~is~~ 124 (193)
T 3b77_A 119 LAIAEK 124 (193)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 54
>3zxu_A MCM21; cell cycle, COMA complex, protein complex, cell division; 3.70A {Kluyveromyces lactis}
Probab=46.66 E-value=26 Score=28.97 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=30.0
Q ss_pred HHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecCCCCceEEEEcCC
Q psy14197 41 EAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPS 91 (178)
Q Consensus 41 ~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g~~~p~lLGI~~~ 91 (178)
..|.+..+-++....+.|=.+.+- ||+|+|.|+-. .+.+|||--+
T Consensus 99 ~~~~e~~~~~~L~~~IllENlYRm---fGITaFPv~DP---~~~lLGIRfD 143 (296)
T 3zxu_A 99 SGHNEVAGFKSITDFVQWENSVRL---IGVSLFPVNYD---NIEFMGIRLE 143 (296)
T ss_dssp ---CCBTTBSCHHHHHHHHHHHHT---TSEEEEEEECS---SBEEEEEEEC
T ss_pred CCCCCcccchHHHHHHHHHHHHHh---hcceeeeeeCC---CCCeEEEEEE
Confidence 346666666666666665555554 79999999954 6789998655
No 55
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=44.62 E-value=26 Score=28.00 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=26.9
Q ss_pred eEEEE-cCCcEEEEeCCCCCeEEeeeccccccc
Q psy14197 84 ELLGV-TPSRLMRMELSSGDHVRTWRYDTVKAW 115 (178)
Q Consensus 84 ~lLGI-~~~gv~~id~~tkeil~~~~~s~i~~w 115 (178)
.+..+ ..+.|.+|||+|++++..+.++.+..-
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~ 194 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPD 194 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTT
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccc
Confidence 35566 478999999999999999999988653
No 56
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=40.06 E-value=1.2e+02 Score=23.01 Aligned_cols=73 Identities=19% Similarity=0.338 Sum_probs=50.2
Q ss_pred EEEEcC--CcEEEEeC----CCC--CeEEeeeccccccccccc-CCceEEEEecCCCeEEEEecCCHHHHHHHHhhhhhH
Q psy14197 85 LLGVTP--SRLMRMEL----SSG--DHVRTWRYDTVKAWNVNW-EIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFL 155 (178)
Q Consensus 85 lLGI~~--~gv~~id~----~tk--eil~~~~~s~i~~w~~~~-~~~~f~l~fg~~~~~~~~~T~~~~~i~~Li~~Yi~l 155 (178)
+|++.. .|-++|+- .++ .+=.+|++.+|+...... +...|.|+|+ ..|-.+|...++=..+|.+-+.+
T Consensus 70 ~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl~---K~Y~W~a~s~~Er~~FI~sL~K~ 146 (171)
T 3hie_A 70 ILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMS---KKYYWETNSAKERTVFIKSLITL 146 (171)
T ss_dssp EEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEESS---SEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCCCCcEEEEeC---CeEEEecCCHHHHHHHHHHHHHH
Confidence 667777 55455541 122 677999999999987632 4578999984 44667887766655688777777
Q ss_pred hhhcc
Q psy14197 156 SMRSK 160 (178)
Q Consensus 156 ~~~~~ 160 (178)
+++-.
T Consensus 147 y~ky~ 151 (171)
T 3hie_A 147 YIQTF 151 (171)
T ss_dssp HHHTS
T ss_pred HHHHc
Confidence 76543
No 57
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=39.75 E-value=1.5e+02 Score=24.04 Aligned_cols=71 Identities=6% Similarity=0.080 Sum_probs=52.6
Q ss_pred CCCceEEEEcCCcEEEEeCCCCC-------eEEeeecccccccccccCCceEEEEecCCCeEEEEecCCHHHHHHHHhh
Q psy14197 80 HKKEELLGVTPSRLMRMELSSGD-------HVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGG 151 (178)
Q Consensus 80 ~~~p~lLGI~~~gv~~id~~tke-------il~~~~~s~i~~w~~~~~~~~f~l~fg~~~~~~~~~T~~~~~i~~Li~~ 151 (178)
...|..|=|..+.+-+...+-.+ ..-.|++++|..-.++ +++.|+|.+.+.+....+.+.++.+|-+.|..
T Consensus 202 ~~~~V~lkIG~~~lQi~~~~k~~i~~~~~~~nDVy~lsdI~ev~~~-~~~eFti~~~n~~~~l~f~S~~~~eIv~~i~~ 279 (290)
T 3peg_A 202 KDTKVSIKVGSTAVQVTSAERTKVLGQSVFLNDIYYASEIEEICLV-DENQFTLTIANQGTPLTFMHQECEAIVQSIIH 279 (290)
T ss_dssp SCEEEEEEECSSEEEEEESSCEEETTEEECCEEEEETTTEEEEEEE-ETTEEEEEETTCSSCEEEECTTHHHHHHHHHH
T ss_pred cCCCEEEEECCCEEEEEEeccEEccccCceeEEEEEeeeeeEEEec-CCCceEEEEeCCcEEEEEeCcCHHHHHHHHHH
Confidence 33477888888877777642222 3567899999887665 57899999987766677789999999887754
No 58
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=39.04 E-value=43 Score=26.74 Aligned_cols=79 Identities=5% Similarity=0.041 Sum_probs=52.4
Q ss_pred EEEEeec-CCCCceEEEEcCCcEEEEeCCCC------CeEEeeecccccccccccCCceEEEEecCCCeEEEEecCCHHH
Q psy14197 72 LFVIKPM-GHKKEELLGVTPSRLMRMELSSG------DHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKV 144 (178)
Q Consensus 72 fF~Vk~~-g~~~p~lLGI~~~gv~~id~~tk------eil~~~~~s~i~~w~~~~~~~~f~l~fg~~~~~~~~~T~~~~~ 144 (178)
|-.|..- ....|..|=|..+.+-+...+-. ...-.|++++|..-..+ +++.|+|.+.+.+....+.+.++.+
T Consensus 160 f~~v~~l~~~~~pV~lkIG~~~~qi~~~~~~i~~~~~~~ndVy~ls~i~~v~t~-~~~eFtl~~~n~~~~l~f~S~~~~e 238 (256)
T 3pg7_A 160 FHNALKLAHKDTKVSIKVGSTAVQVTSAERTVLGQSVFLNDIYYASEIEEICLV-DENQFTLTIANQGTPLTFMHQECEA 238 (256)
T ss_dssp EEEEEEESSSCEEEEEEECSSEEEEEESCEEETTEEECCEEEEEGGGEEEEEEE-ETTEEEEEETTCCSCEEEECTTHHH
T ss_pred eccceeeccCCCcEEEEECCCEEEEEEEEeEecCCcceeEEEEEeeeeEEEecC-CCCCeEEEEeCCcEEEEEeCcCHHH
Confidence 4455432 23347777676666666654311 14566889999886544 5689999997776556778899998
Q ss_pred HHHHHhh
Q psy14197 145 VHEFIGG 151 (178)
Q Consensus 145 i~~Li~~ 151 (178)
|-+.|..
T Consensus 239 Iv~~i~~ 245 (256)
T 3pg7_A 239 IVQSIIH 245 (256)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877643
No 59
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=37.91 E-value=1.3e+02 Score=22.56 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=49.8
Q ss_pred ceEEEEcCCcEEEEeCCCCCeEEeeecccccccc-cccCC----ceEEEEecCC-C---eEEEEecCC---HHHHHHHHh
Q psy14197 83 EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWN-VNWEI----KHMMLQLTDG-N---FIFECQSAD---CKVVHEFIG 150 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~-~~~~~----~~f~l~fg~~-~---~~~~~~T~~---~~~i~~Li~ 150 (178)
+.++.|++.||.+.|.++.+++...|+-.|.+.- +.... ..|.+.-++. + ..+.++++. +..|-.+++
T Consensus 63 dvi~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~YdDg~g~g~~vla~KT~~~~~~~~~~hv~Qc~s~~~A~~iC~~l~ 142 (154)
T 4dx8_A 63 EFIMGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCYDDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICKVLS 142 (154)
T ss_dssp CEEEEEETTEEEEEETTSCCEEEEEEGGGEEEEEEEECCSSSCCEEEEEEEECTTSCCEEEEEEEESSHHHHHHHHHHHH
T ss_pred eEEEEEeccCcEEEeccCcccccchhHHHhhhheeeccccccccEEEEEEecCCCCceEEEEEEEcCCHHHHHHHHHHHH
Confidence 4699999999999999999999999999998543 22211 2246666644 2 344456654 444444555
Q ss_pred hhhhHhhh
Q psy14197 151 GYIFLSMR 158 (178)
Q Consensus 151 ~Yi~l~~~ 158 (178)
.-++..+.
T Consensus 143 ~~f~~~~~ 150 (154)
T 4dx8_A 143 TAFDSVLT 150 (154)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 55554443
No 60
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=37.33 E-value=25 Score=28.46 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=25.6
Q ss_pred EEEE-cCCcEEEEeCCCCCeEEeeeccccccc
Q psy14197 85 LLGV-TPSRLMRMELSSGDHVRTWRYDTVKAW 115 (178)
Q Consensus 85 lLGI-~~~gv~~id~~tkeil~~~~~s~i~~w 115 (178)
+.++ ..+.|.+|||+|++++.++.++.+..-
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~ 216 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAE 216 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGG
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccc
Confidence 3444 478899999999999999999988653
No 61
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=34.66 E-value=30 Score=28.14 Aligned_cols=30 Identities=10% Similarity=0.200 Sum_probs=25.4
Q ss_pred eEEEE-cCCcEEEEeCCCCCeEEeeeccccc
Q psy14197 84 ELLGV-TPSRLMRMELSSGDHVRTWRYDTVK 113 (178)
Q Consensus 84 ~lLGI-~~~gv~~id~~tkeil~~~~~s~i~ 113 (178)
.+.++ ..+.|.+|||+|++++.++.++.+.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~ 223 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALT 223 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHH
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCc
Confidence 45566 4778999999999999999999775
No 62
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=32.93 E-value=1e+02 Score=20.30 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=22.8
Q ss_pred HHHHHHhccCCCChhHHHHHH---HHHH---------hcCCCCceeEEEEeec
Q psy14197 38 RILEAHANVKDLGLTEAKLSY---IRAW---------QSLPDYGLTLFVIKPM 78 (178)
Q Consensus 38 ~I~~~h~~~~~ls~~eAK~~y---Lk~~---------~~lp~fG~tfF~Vk~~ 78 (178)
++.++.....|+|..+|+... +..+ -.+|.||. |.|+.+
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g~~V~l~gfG~--F~v~~r 58 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAGEKVQLIGFGT--FEVRER 58 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEE--EEEEEE
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCEE--EEEEEE
Confidence 344444444588887776543 2222 35788886 777764
No 63
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=31.34 E-value=1.4e+02 Score=20.99 Aligned_cols=84 Identities=15% Similarity=0.198 Sum_probs=57.5
Q ss_pred EEEEeecCCC-CceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCC-ceEEEEecCC---CeEEEEec-----CC
Q psy14197 72 LFVIKPMGHK-KEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEI-KHMMLQLTDG---NFIFECQS-----AD 141 (178)
Q Consensus 72 fF~Vk~~g~~-~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~-~~f~l~fg~~---~~~~~~~T-----~~ 141 (178)
.+.|..-..+ ++..|-+..+.|.-.+....+...+.+|++|++-.++++. ..+.|.+.-. +..|.+-. .+
T Consensus 9 ll~v~~v~yKK~dGtL~l~~d~i~W~p~~~~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F~Ftn~~~a~~e 88 (108)
T 1pfj_A 9 LLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKE 88 (108)
T ss_dssp EEEESCCBCSSCBCEEEEETTEEEEECSSSSSCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEEECCCSSCTTHH
T ss_pred eEEehhheeecCCceEEEEcceEEEccCCCCCceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEEEEcCcHHHHHH
Confidence 3444433333 4689999999999998767889999999999999988843 3355554433 34455544 24
Q ss_pred HHHHHHHHhhhhhH
Q psy14197 142 CKVVHEFIGGYIFL 155 (178)
Q Consensus 142 ~~~i~~Li~~Yi~l 155 (178)
.+.|.++|..-+.-
T Consensus 89 rd~VKd~L~~~l~~ 102 (108)
T 1pfj_A 89 RDAVKDLLQQLLPK 102 (108)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66788888765543
No 64
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=28.42 E-value=34 Score=24.37 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=18.9
Q ss_pred EEEEeCCCCCeEEeeecccccc
Q psy14197 93 LMRMELSSGDHVRTWRYDTVKA 114 (178)
Q Consensus 93 v~~id~~tkeil~~~~~s~i~~ 114 (178)
|.++|.+|+++|..+|-.++-.
T Consensus 71 VkVvD~~TgEVIRqIPpEe~L~ 92 (117)
T 2hc5_A 71 VKVIEDSTNEVIREIPPKRWLD 92 (117)
T ss_dssp EEEEETTTTEEEEEECHHHHHH
T ss_pred EEEEECCCCcEEEeCChHHHHH
Confidence 7889999999999999776544
No 65
>1mw5_A Hypothetical protein HI1480; structural genomics, structure 2 function project, S2F, unknown function; HET: MSE; 2.10A {Haemophilus influenzae} SCOP: d.259.1.1
Probab=26.86 E-value=46 Score=24.39 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHhcCCCCceeEE
Q psy14197 48 DLGLTEAKLSYIRAWQSLPDYGLTLF 73 (178)
Q Consensus 48 ~ls~~eAK~~yLk~~~~lp~fG~tfF 73 (178)
=+|+++---+||+..|.+|..|++-.
T Consensus 48 llseenwhkqflkfaqalpahgsasw 73 (187)
T 1mw5_A 48 LLSEENWHKQFLKFAQALPAHGSASW 73 (187)
T ss_dssp CCCHHHHHHHHHHHHHTSCSSSCCCH
T ss_pred hhchhhHHHHHHHHHHhccccCcccc
Confidence 48899999999999999999999754
No 66
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=21.63 E-value=2.1e+02 Score=22.61 Aligned_cols=23 Identities=9% Similarity=0.102 Sum_probs=20.6
Q ss_pred CCcEEEEeCCCCCeEEeeecccc
Q psy14197 90 PSRLMRMELSSGDHVRTWRYDTV 112 (178)
Q Consensus 90 ~~gv~~id~~tkeil~~~~~s~i 112 (178)
.+.|.+||++|++++.++++..+
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~ 193 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNL 193 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHH
T ss_pred CCeEEEEECCCCcEEEEEECCCc
Confidence 57899999999999999999744
No 67
>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}
Probab=21.51 E-value=65 Score=22.94 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=20.5
Q ss_pred EEEcCCcEEEEeCCCCCeEEeeecccccc
Q psy14197 86 LGVTPSRLMRMELSSGDHVRTWRYDTVKA 114 (178)
Q Consensus 86 LGI~~~gv~~id~~tkeil~~~~~s~i~~ 114 (178)
.+++.+.+.+.||..++....++++++..
T Consensus 101 ~~~~~~~v~I~DP~~g~~~~~ls~~ef~~ 129 (156)
T 3k8u_A 101 YGSQNNQLIIGDPDPSVKVTRMSKERFQS 129 (156)
T ss_dssp EEEETTEEEEEECSTTTEEEEEEHHHHHH
T ss_pred EEEcCCEEEEEcCCCCcceEEEcHHHHHh
Confidence 45667778888887775566777777654
No 68
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=21.43 E-value=74 Score=23.87 Aligned_cols=38 Identities=5% Similarity=0.013 Sum_probs=29.7
Q ss_pred ceEEEEcCCcEEEEeCCCCCeE-EeeecccccccccccC
Q psy14197 83 EELLGVTPSRLMRMELSSGDHV-RTWRYDTVKAWNVNWE 120 (178)
Q Consensus 83 p~lLGI~~~gv~~id~~tkeil-~~~~~s~i~~w~~~~~ 120 (178)
...|=|+.+||.+.|...|... ..||+..|.-=..++.
T Consensus 53 ~V~fkVS~qGItLtD~~rK~FfrrHypl~~IsFC~~DP~ 91 (157)
T 3hqc_A 53 VVHFKVSAQGITLTDNQRKLFFRRHYPVNSITFSSTDPQ 91 (157)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEGGGEEEEEECTT
T ss_pred EEEEEEeCCCceEEecccceeehhcCcccceEeecCChh
Confidence 4688999999999999888654 4589988876555553
No 69
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=20.22 E-value=2.2e+02 Score=19.62 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=41.8
Q ss_pred HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCC------CceeEEEEeecCCCCceEEEEcCCc
Q psy14197 35 LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPD------YGLTLFVIKPMGHKKEELLGVTPSR 92 (178)
Q Consensus 35 ~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~------fG~tfF~Vk~~g~~~p~lLGI~~~g 92 (178)
--+.|+..|.....+++.|..+ -+.++..-|. =|+..|.|........|+.-|-.+|
T Consensus 23 ~~k~iL~~y~~g~~l~~~d~~~-l~~lL~~HP~~~~KiG~Gi~~i~V~~h~~~srCFfvvR~DG 85 (104)
T 2k0m_A 23 FMKVMLNRYRPGDIVSTVDGAF-LVEALKRHPDATSKIGPGVRNFEVRSADYGTQCFWILRTDG 85 (104)
T ss_dssp HHHHHHHHSCTTEECCHHHHHH-HHHHHHTSTTHHHHHTTCEEEEEEEESSSSCEEEEEEETTS
T ss_pred HHHHHHHhCCCCCccCHHHHHH-HHHHHHhCCcHHHhcCCCcceEEEecCCCCCcEEEEEEeCC
Confidence 5667888898888899887665 7778888885 4899999987533346666555554
Done!