Query psy14199
Match_columns 677
No_of_seqs 241 out of 1131
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 21:58:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tig_A TTL protein; ATP-grAsp, 100.0 2E-56 6.9E-61 481.4 18.6 282 331-673 15-333 (380)
2 3n6x_A Putative glutathionylsp 95.4 0.012 4.2E-07 65.3 5.3 134 376-563 308-453 (474)
3 1gsa_A Glutathione synthetase; 95.2 0.036 1.2E-06 55.8 7.5 60 415-483 134-202 (316)
4 2cqy_A Propionyl-COA carboxyla 94.9 0.046 1.6E-06 46.7 6.3 43 443-485 46-99 (108)
5 1e4e_A Vancomycin/teicoplanin 94.3 0.24 8.1E-06 51.5 11.4 42 442-483 165-211 (343)
6 3se7_A VANA; alpha-beta struct 93.9 0.34 1.2E-05 50.6 11.6 43 441-483 164-211 (346)
7 1uc8_A LYSX, lysine biosynthes 93.8 0.03 1E-06 55.5 3.1 87 377-483 76-173 (280)
8 1i7n_A Synapsin II; synapse, p 93.7 0.073 2.5E-06 55.9 6.1 42 442-483 152-198 (309)
9 2p0a_A Synapsin-3, synapsin II 93.2 0.098 3.3E-06 55.8 6.1 42 442-483 169-215 (344)
10 4fu0_A D-alanine--D-alanine li 93.2 0.37 1.3E-05 50.6 10.5 43 441-483 176-223 (357)
11 2f69_A Histone-lysine N-methyl 93.1 0.084 2.9E-06 54.2 5.3 65 161-236 185-249 (261)
12 1iow_A DD-ligase, DDLB, D-ALA\ 92.8 0.17 5.8E-06 50.9 6.9 43 442-484 138-185 (306)
13 3i12_A D-alanine-D-alanine lig 92.6 0.92 3.2E-05 47.8 12.6 41 443-483 180-225 (364)
14 1pk8_A RAT synapsin I; ATP bin 92.6 0.13 4.6E-06 56.2 6.1 42 442-483 264-310 (422)
15 1n3j_A A612L, histone H3 lysin 92.4 0.069 2.3E-06 47.9 3.1 47 161-221 63-109 (119)
16 2q7d_A Inositol-tetrakisphosph 91.8 0.36 1.2E-05 51.1 8.3 138 334-484 36-204 (346)
17 3f9x_A Histone-lysine N-methyl 91.6 0.091 3.1E-06 49.5 3.0 50 162-223 107-156 (166)
18 1z2n_X Inositol 1,3,4-trisphos 91.5 0.28 9.7E-06 50.0 6.8 87 377-483 86-177 (324)
19 4dim_A Phosphoribosylglycinami 90.9 0.21 7.1E-06 52.7 5.2 44 442-485 144-194 (403)
20 3ouz_A Biotin carboxylase; str 90.3 0.36 1.2E-05 52.0 6.5 43 443-485 157-210 (446)
21 3n71_A Histone lysine methyltr 89.6 0.71 2.4E-05 51.1 8.3 94 121-232 164-267 (490)
22 2pn1_A Carbamoylphosphate synt 89.6 0.19 6.4E-06 51.4 3.5 82 385-484 110-192 (331)
23 2w70_A Biotin carboxylase; lig 88.8 0.8 2.7E-05 49.2 7.8 43 443-485 154-207 (449)
24 1ulz_A Pyruvate carboxylase N- 88.6 0.7 2.4E-05 49.7 7.2 43 443-485 152-205 (451)
25 2r85_A PURP protein PF1517; AT 88.5 0.29 1E-05 49.8 4.0 42 443-484 127-178 (334)
26 2ip4_A PURD, phosphoribosylami 88.3 0.72 2.5E-05 49.1 7.0 43 443-485 137-186 (417)
27 2yw2_A Phosphoribosylamine--gl 87.8 0.69 2.4E-05 49.2 6.5 81 385-485 98-191 (424)
28 2dzd_A Pyruvate carboxylase; b 87.5 0.75 2.6E-05 49.7 6.6 43 443-485 158-211 (461)
29 1h3i_A Histone H3 lysine 4 spe 87.3 0.6 2E-05 48.1 5.4 52 161-223 239-290 (293)
30 2vpq_A Acetyl-COA carboxylase; 87.1 1 3.5E-05 48.4 7.4 43 443-485 152-205 (451)
31 1kjq_A GART 2, phosphoribosylg 86.8 0.77 2.6E-05 48.1 6.0 42 443-484 149-199 (391)
32 3lp8_A Phosphoribosylamine-gly 86.7 1.1 3.8E-05 48.6 7.4 43 442-484 158-211 (442)
33 2xcl_A Phosphoribosylamine--gl 86.6 0.7 2.4E-05 49.1 5.7 79 386-484 99-190 (422)
34 3rq4_A Histone-lysine N-methyl 86.4 0.52 1.8E-05 48.1 4.3 50 160-224 174-223 (247)
35 3ope_A Probable histone-lysine 86.2 0.81 2.8E-05 45.5 5.6 48 161-220 145-192 (222)
36 2w5y_A Histone-lysine N-methyl 86.2 0.83 2.8E-05 44.7 5.5 49 161-221 123-171 (192)
37 3ooi_A Histone-lysine N-methyl 85.6 0.93 3.2E-05 45.5 5.6 49 161-221 164-212 (232)
38 3r5x_A D-alanine--D-alanine li 85.5 0.39 1.3E-05 48.6 2.9 42 443-484 134-180 (307)
39 2r3a_A Histone-lysine N-methyl 85.5 0.87 3E-05 47.6 5.6 50 161-220 214-265 (300)
40 1ml9_A Histone H3 methyltransf 85.4 0.68 2.3E-05 48.2 4.7 51 161-221 219-271 (302)
41 2i87_A D-alanine-D-alanine lig 85.2 0.51 1.7E-05 49.5 3.7 42 442-483 171-217 (364)
42 2yrx_A Phosphoribosylglycinami 85.1 1 3.5E-05 48.6 6.1 42 443-484 159-211 (451)
43 3qww_A SET and MYND domain-con 84.5 1.9 6.5E-05 46.9 7.9 89 122-232 167-255 (433)
44 2qk4_A Trifunctional purine bi 84.5 1 3.4E-05 48.6 5.7 43 443-485 164-218 (452)
45 1mvh_A Cryptic LOCI regulator 84.3 0.83 2.8E-05 47.6 4.8 56 156-221 202-264 (299)
46 3mjf_A Phosphoribosylamine--gl 84.3 1.4 4.9E-05 47.5 6.8 42 443-484 143-195 (431)
47 2dwc_A PH0318, 433AA long hypo 84.1 1.1 3.8E-05 47.9 5.8 41 443-483 157-206 (433)
48 1ehi_A LMDDL2, D-alanine:D-lac 84.0 1.4 5E-05 46.5 6.6 42 443-484 175-221 (377)
49 3ax6_A Phosphoribosylaminoimid 83.4 0.51 1.8E-05 49.5 2.7 41 442-483 132-173 (380)
50 3bo5_A Histone-lysine N-methyl 83.3 1.5 5.2E-05 45.5 6.2 50 161-221 204-253 (290)
51 3h6l_A Histone-lysine N-methyl 83.0 0.99 3.4E-05 46.7 4.7 48 161-220 189-236 (278)
52 2io8_A Bifunctional glutathion 82.7 1.5 5.1E-05 50.3 6.3 77 385-485 493-574 (619)
53 2fb9_A D-alanine:D-alanine lig 82.4 0.8 2.8E-05 47.3 3.7 43 442-484 150-197 (322)
54 3k5i_A Phosphoribosyl-aminoimi 82.2 1.6 5.3E-05 46.7 6.0 41 443-483 161-205 (403)
55 3q2o_A Phosphoribosylaminoimid 82.0 1.7 5.8E-05 45.8 6.2 42 443-484 148-193 (389)
56 3aw8_A PURK, phosphoribosylami 81.7 0.99 3.4E-05 47.1 4.1 42 442-483 131-176 (369)
57 1w96_A ACC, acetyl-coenzyme A 81.6 1.1 3.8E-05 50.0 4.7 43 443-485 235-284 (554)
58 3qwp_A SET and MYND domain-con 81.4 0.78 2.7E-05 49.8 3.3 86 125-232 170-255 (429)
59 4eg0_A D-alanine--D-alanine li 81.0 0.67 2.3E-05 47.5 2.5 42 443-484 147-193 (317)
60 3orq_A N5-carboxyaminoimidazol 80.5 1.6 5.3E-05 46.2 5.2 43 442-484 145-191 (377)
61 3vmm_A Alanine-anticapsin liga 80.5 1.6 5.3E-05 48.1 5.3 81 386-486 136-235 (474)
62 3jrx_A Acetyl-COA carboxylase 79.3 1.2 4.1E-05 50.7 4.0 44 442-485 244-294 (587)
63 3hna_A Histone-lysine N-methyl 78.7 1.5 5.2E-05 45.4 4.3 49 161-219 215-265 (287)
64 3s8p_A Histone-lysine N-methyl 78.7 1.1 3.9E-05 46.3 3.3 47 161-222 204-250 (273)
65 4e4t_A Phosphoribosylaminoimid 78.6 1.5 5.2E-05 47.3 4.4 42 443-484 172-217 (419)
66 3e5n_A D-alanine-D-alanine lig 78.5 1.8 6.2E-05 46.2 5.0 42 443-484 199-245 (386)
67 3lwb_A D-alanine--D-alanine li 78.0 1.3 4.4E-05 47.1 3.6 42 442-483 188-234 (373)
68 3df7_A Putative ATP-grAsp supe 78.0 0.76 2.6E-05 47.3 1.8 35 442-484 133-167 (305)
69 3vot_A L-amino acid ligase, BL 78.0 1.4 4.7E-05 47.0 3.9 44 442-485 145-204 (425)
70 3tqt_A D-alanine--D-alanine li 77.6 1.5 5E-05 46.8 3.9 41 443-483 180-226 (372)
71 3glk_A Acetyl-COA carboxylase 77.6 1.2 4.1E-05 50.0 3.4 44 442-485 228-278 (540)
72 3ln6_A Glutathione biosynthesi 77.2 1.8 6.1E-05 50.6 4.8 42 442-483 520-569 (750)
73 2z04_A Phosphoribosylaminoimid 76.5 0.95 3.2E-05 47.1 2.0 41 443-483 127-172 (365)
74 1vkz_A Phosphoribosylamine--gl 76.0 1.5 5.1E-05 46.8 3.5 43 442-484 141-194 (412)
75 2vob_A Trypanothione synthetas 75.8 2.1 7E-05 49.4 4.7 78 385-485 508-589 (652)
76 2pvp_A D-alanine-D-alanine lig 75.1 1.6 5.5E-05 46.2 3.4 44 441-484 184-232 (367)
77 3ln7_A Glutathione biosynthesi 74.7 2.8 9.4E-05 49.1 5.5 42 442-483 525-575 (757)
78 3k3p_A D-alanine--D-alanine li 74.6 1.4 4.7E-05 47.2 2.7 42 442-483 201-247 (383)
79 3tig_A TTL protein; ATP-grAsp, 74.4 0.93 3.2E-05 49.0 1.3 28 497-526 200-227 (380)
80 3u9t_A MCC alpha, methylcroton 73.5 1.9 6.4E-05 49.8 3.6 44 442-485 178-232 (675)
81 1a9x_A Carbamoyl phosphate syn 68.9 4.9 0.00017 48.6 6.0 43 443-485 710-759 (1073)
82 2pbz_A Hypothetical protein; N 68.6 0.94 3.2E-05 47.6 -0.3 41 442-483 125-167 (320)
83 4ffl_A PYLC; amino acid, biosy 65.3 3.6 0.00012 42.6 3.4 42 442-485 125-166 (363)
84 3n6r_A Propionyl-COA carboxyla 65.3 1.5 5E-05 50.7 0.4 44 442-485 152-206 (681)
85 1a9x_A Carbamoyl phosphate syn 62.9 9.4 0.00032 46.2 6.8 43 443-485 164-213 (1073)
86 2qpw_A PR domain zinc finger p 60.6 6.1 0.00021 37.0 3.7 49 156-220 86-144 (149)
87 2r7k_A 5-formaminoimidazole-4- 60.6 4.2 0.00014 43.3 2.8 41 443-483 151-203 (361)
88 3hbl_A Pyruvate carboxylase; T 58.6 2.8 9.4E-05 51.4 1.1 44 442-485 155-209 (1150)
89 3eth_A Phosphoribosylaminoimid 49.3 7.4 0.00025 41.1 2.5 53 423-484 103-158 (355)
90 3t7a_A Inositol pyrophosphate 48.9 8.4 0.00029 40.8 2.8 100 373-484 81-206 (330)
91 2qf7_A Pyruvate carboxylase pr 47.6 4.1 0.00014 50.0 0.1 44 442-485 171-225 (1165)
92 3va7_A KLLA0E08119P; carboxyla 41.7 5.8 0.0002 48.9 0.2 44 442-485 180-234 (1236)
93 1wr2_A Hypothetical protein PH 25.1 22 0.00074 34.9 1.1 41 443-483 57-117 (238)
No 1
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=100.00 E-value=2e-56 Score=481.43 Aligned_cols=282 Identities=22% Similarity=0.327 Sum_probs=213.2
Q ss_pred echHHHHHHHcCCC-CEEeC-CCCCceEEEccccccchhhhhhc-CCCeEEcccccCcccccchHHHHHHHHhHhhhhcc
Q psy14199 331 SEYKYVSENLTHPR-FVIVD-NEEEADILWYTHHFKDFKTLAEE-TPTKFVNQFPFEYILTIKDLLSIVCRRNSKDIEKT 407 (677)
Q Consensus 331 t~~~~V~~~L~~~g-f~~~~-~~~~adi~W~~~~~~~~~~l~~~-~~~Q~vNhfP~~~~LtrKd~L~~~l~~~~~~~~~~ 407 (677)
|.|+.|+++|++.| |+.+. +..+||++|.+.+.+.|.++... .++|+||||||++.|||||.|+++++++.. +
T Consensus 15 svy~~V~~vL~~~g~w~ev~~~~~~~dl~W~~~~~~p~~~l~~~p~~~Q~vNhfPg~~~l~rKd~L~~nl~~~~~--~-- 90 (380)
T 3tig_A 15 TVYAEVAKILLASGQWKRLKRDNPKFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADKLCRKASLVKLIKTSPE--L-- 90 (380)
T ss_dssp HHHHHHHHHHHHTTSEEECCTTCSCCSEEECCSSSCCGGGSSCSTTCCCEESCCTTTHHHHSHHHHHHHHHHCHH--H--
T ss_pred cHHHHHHHHHHhcCCeEEeCCCCCceeEEEecCCCCCHHHhccCCCcceEEeecCCcccccccHHHHHHHHHhhh--c--
Confidence 55999999999999 98775 46789999999998888888654 678999999999999999999999999532 1
Q ss_pred CCCCCCCcccceeec-Ch-----------------------hHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCC
Q psy14199 408 TLQTSPDWLPTTYNL-KT-----------------------ELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDN 463 (677)
Q Consensus 408 ~~~~~~~~~P~Tf~L-~~-----------------------el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~ 463 (677)
+..++|+|+||+| |. |+.+|+++|.+++..|.++.||+||++++||+||+++++
T Consensus 91 --~~~~~f~P~ty~L~P~~~~~p~~~~~~~~~~~~~~~~~~E~~~F~~~~~~~~~~~~~~~wI~KP~~~srG~GI~l~~~ 168 (380)
T 3tig_A 91 --TETCTWFPESYVIYPTNEKTPAMRARNGLPDLANAPRTDEREEFRSSFNKKKENEEGNVWIAKSSSGAKGEGILISSD 168 (380)
T ss_dssp --HTTCTTSCCEEECCC------------------------CCHHHHHHHHHHHHTTCCCCEEEEESCC----CCBCCSC
T ss_pred --ccccCcCCcceeeCccccccccccccccccccccccchhHHHHHHHHHHHhhhcCCCCeEEEeCCccCCCCCEEEeCC
Confidence 2478999999999 75 456899999988778899999999999999999999999
Q ss_pred hHHHHHhhc--cCCceeeeeccCcccccccccCCccccceeEEEEEeeccchhhhhhcccccccCCCCCceeeEEEEEEE
Q psy14199 464 INMVIKSAL--TGPKIIQKYIENPILFYRDDLSGKVKFDVRYVVLVKSVKPLKVYLYKNFFLRDDLSGKVKFDVRYVVLV 541 (677)
Q Consensus 464 l~~I~r~~~--t~p~VVQkYIenPlLi~r~~~~~~~kfd~r~~vl~~~~~~~~~~~~~~~~~~~~~~~grKFDlR~YVLV 541 (677)
+++|.+..+ ..++|||+||+||+||. .+|+|||||+||||
T Consensus 169 ~~~i~~~~~~~~~~~VvQkYI~~PlLi~--------------------------------------~~grKFDlR~Yvlv 210 (380)
T 3tig_A 169 ATELLDFIDNQGQVHVIQKYLESPLLLE--------------------------------------PGHRKFDIRSWVLV 210 (380)
T ss_dssp SHHHHHHHHHHTSCEEEEECCSSBCCBT--------------------------------------TTTBCEEEEEEEEE
T ss_pred HHHHHHHHhccCCcEEEEecccCceeec--------------------------------------CCCceeEEEEEEEE
Confidence 999987643 46899999999999992 05899999999999
Q ss_pred eeccCcEEEEEccceeeccccCCCCCCCCCcceeeeecccCCC--------CCccCcchhhhHHHHHhhCCCCCcccccc
Q psy14199 542 KSVKPLKVYLYKNFFLRFANKPFELSKFDDYEIHFTVMNYDDK--------TPLCKMLCSDFKIEFEKQNPNENWDHIES 613 (677)
Q Consensus 542 tSv~PL~vYly~~glvRfAt~~Y~l~~l~d~~~HLTN~NYs~~--------~~~~~~~~~dF~~~l~~~~~~~~W~~~~~ 613 (677)
|| ||+||+|++|++|||+++|++++++|.++||||+..+++ +.++.+++++|.+++++.+ +..|..
T Consensus 211 ts--~l~vy~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~-~~~~~~--- 284 (380)
T 3tig_A 211 DN--QYNIYLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSL-NINLEN--- 284 (380)
T ss_dssp CT--TCCEEECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTS-SCCHHH---
T ss_pred cC--CCEEEEEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhc-CccHHH---
Confidence 98 999999999999999999999999999999998755442 2356788899999998765 334542
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCceEEEeecEEEeCCCCcccc
Q psy14199 614 KINPSENWDHIESKIVTMFRSVFEAATMKDPPLGLGHNVQSRSLYAADLMLTKQNNSYHV 673 (677)
Q Consensus 614 g~~~~~~w~~I~~~I~~~i~~vf~aa~~~~~~~~~~~~~~~FELyG~DfmLD~~~~~y~~ 673 (677)
.|.++|+++|+.+|.+++...... ..+.+||||||+|||||+++++|.+
T Consensus 285 ---------~i~~~I~~ii~~~l~a~~~~i~~~--~~~~~~FEl~G~D~lid~~l~~wll 333 (380)
T 3tig_A 285 ---------SILCQIKEIIRVCLSCLEPAISTK--YLPYHSFQLFGFDFMVDKNLKVWLI 333 (380)
T ss_dssp ---------HTHHHHHHHHHHHHHHHHHHHCCT--TSSSEECEEEEEEEEEBTTCCEEEE
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhhhc--ccCCceEEEEeEEEEEcCCCcEEEE
Confidence 377888888888888876554322 2346899999999999999998875
No 2
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=95.39 E-value=0.012 Score=65.29 Aligned_cols=134 Identities=18% Similarity=0.099 Sum_probs=77.0
Q ss_pred eEEcccccCcccccchHHHHHHHHhHhhh-hccCCCCCCCcccceeecCh-hHHHHHHHHhhhhhcCCCceEEEcCCCCC
Q psy14199 376 KFVNQFPFEYILTIKDLLSIVCRRNSKDI-EKTTLQTSPDWLPTTYNLKT-ELLKFMSYYQNREKKNLNNLWIIKPFNLA 453 (677)
Q Consensus 376 Q~vNhfP~~~~LtrKd~L~~~l~~~~~~~-~~~~~~~~~~~~P~Tf~L~~-el~~f~~~~~~~~~~g~~n~WIlKP~n~a 453 (677)
..+|. |+..++-.|..++-.=. +.+.+ +.+ ..-..+|+++.-.. +++.+.+. ...|++||..++
T Consensus 308 ~i~Na-~gsgv~~dKal~a~Lp~-l~~~~lgEe---~il~~VpT~~c~~~~~~~~vl~~---------l~~lViKp~~g~ 373 (474)
T 3n6x_A 308 TLANA-VGTGVADDKDTYIYVPE-MIRFYLGEE---PILSNVPTYQLSKADDLKYVLDN---------LAELVVKEVQGS 373 (474)
T ss_dssp EEESC-TTTHHHHSTTTGGGHHH-HHHHHHCSC---CSSEECCCEETTSHHHHHHHHHS---------GGGEEEEECCCE
T ss_pred EEeCC-CchhhhcCcHHHHHhHH-HHHHhCCHh---hhccCCCceecCCHHHHHHHHhc---------hhheEEEecCCC
Confidence 45665 46678888976543322 22222 221 12345675554433 33333221 347999999999
Q ss_pred CCCceEEeCCh--H---HHHHhhccCC--ceeeeeccC---cccccccccCCccccceeEEEEEeeccchhhhhhccccc
Q psy14199 454 RSLDSYITDNI--N---MVIKSALTGP--KIIQKYIEN---PILFYRDDLSGKVKFDVRYVVLVKSVKPLKVYLYKNFFL 523 (677)
Q Consensus 454 RG~GI~I~~~l--~---~I~r~~~t~p--~VVQkYIen---PlLi~r~~~~~~~kfd~r~~vl~~~~~~~~~~~~~~~~~ 523 (677)
.|.|+.+-... + ++.+.....| +|+|+||.- |.+.. ..+
T Consensus 374 gg~gv~iG~~~s~~e~~~~~~~i~~~p~~yIaQe~v~ls~~P~~~~-~~~------------------------------ 422 (474)
T 3n6x_A 374 GGYGMLVGPAASKQELEDFRQRILANPANYIAQPTLALSTCPTLVE-TGI------------------------------ 422 (474)
T ss_dssp -----EEGGGCCHHHHHHHHHHHHHSGGGEEEEECCCCCEEEEEET-TEE------------------------------
T ss_pred CCCceEECCcCCHHHHHHHHHHHHhCCCCEEEeeccCCcccceeeC-Cce------------------------------
Confidence 99999996543 2 3333344567 999999963 22221 000
Q ss_pred ccCCCCCceeeEEEEEEEeeccCcEEEEEccceeeccccC
Q psy14199 524 RDDLSGKVKFDVRYVVLVKSVKPLKVYLYKNFFLRFANKP 563 (677)
Q Consensus 524 ~~~~~~grKFDlR~YVLVtSv~PL~vYly~~glvRfAt~~ 563 (677)
..+++|+|.|++-. + ..++.--|+.|.|..+
T Consensus 423 -----~~r~~dlR~F~~~g--~--~~~v~pGgltRva~~~ 453 (474)
T 3n6x_A 423 -----APRHVDLRPFVLSG--K--TVSLVPGALCRVALRE 453 (474)
T ss_dssp -----EEEEEEEECEEEES--S--SEEECSCCEEEEECST
T ss_pred -----eeeeEEEEEEEEcC--C--ceEEecceEEEEecCC
Confidence 35899999999863 3 3678899999999764
No 3
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=95.16 E-value=0.036 Score=55.83 Aligned_cols=60 Identities=18% Similarity=0.119 Sum_probs=41.8
Q ss_pred cccceeecC--hhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeC-ChHHHHHhh------ccCCceeeeecc
Q psy14199 415 WLPTTYNLK--TELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITD-NINMVIKSA------LTGPKIIQKYIE 483 (677)
Q Consensus 415 ~~P~Tf~L~--~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~-~l~~I~r~~------~t~p~VVQkYIe 483 (677)
-.|+|+.+. .++.+|.+.+ + -+|+||..++.|+|+.+++ +.+++.... ...++++|+||+
T Consensus 134 ~~P~t~~~~~~~~~~~~~~~~------~---p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~~~~~~~lvqe~i~ 202 (316)
T 1gsa_A 134 LTPETLVTRNKAQLKAFWEKH------S---DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLP 202 (316)
T ss_dssp TSCCEEEESCHHHHHHHHHHH------S---SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTTTTTSCEEEEECCG
T ss_pred cCCCeEEeCCHHHHHHHHHHc------C---CEEEEECCCCCcccEEEecCChHHHHHHHHHHHhcCCceEEEecccC
Confidence 467887765 3444444321 2 6999999999999999998 665543322 136799999996
No 4
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.87 E-value=0.046 Score=46.70 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=35.6
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--.|+||..++.|.|+.+.++.+++....+ ..+.+||+||.-+
T Consensus 46 ~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvee~i~g~ 99 (108)
T 2cqy_A 46 YPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAASSFGDDRLLIEKFIDNP 99 (108)
T ss_dssp SSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHHHTSSCCEEEEECCSSS
T ss_pred CCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEeeccCCC
Confidence 468999999999999999999888765432 3578999999865
No 5
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=94.31 E-value=0.24 Score=51.53 Aligned_cols=42 Identities=10% Similarity=0.075 Sum_probs=34.7
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+
T Consensus 165 ~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~~~~~lvEe~I~ 211 (343)
T 1e4e_A 165 TYPVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVS 211 (343)
T ss_dssp CSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTTTCSSEEEEECCC
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCcEEEEeCcC
Confidence 3479999999999999999999888765432 35789999995
No 6
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=93.88 E-value=0.34 Score=50.57 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=35.1
Q ss_pred CCceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 441 LNNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 441 ~~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
.+--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+
T Consensus 164 lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~~~~vlvEe~I~ 211 (346)
T 3se7_A 164 LTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVI 211 (346)
T ss_dssp CCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTTTCSEEEEEECCC
T ss_pred cCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHhCCCcEEEEeCcC
Confidence 34469999999999999999999988866432 35689999996
No 7
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=93.78 E-value=0.03 Score=55.46 Aligned_cols=87 Identities=20% Similarity=0.071 Sum_probs=52.5
Q ss_pred EEcccccCcccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecC--hhHHHHHHHHhhhhhcCCCceEEEcCCCCCC
Q psy14199 377 FVNQFPFEYILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLK--TELLKFMSYYQNREKKNLNNLWIIKPFNLAR 454 (677)
Q Consensus 377 ~vNhfP~~~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~--~el~~f~~~~~~~~~~g~~n~WIlKP~n~aR 454 (677)
.+|..........|..+.+.+++. |. + .|+|+.+. .++.++.+.+ +.-+|+||..++.
T Consensus 76 ~~~~~~~~~~~~dK~~~~~~l~~~-------gi---~--~p~~~~~~~~~~~~~~~~~~--------~~p~vvKp~~g~~ 135 (280)
T 1uc8_A 76 VVNRPEVIEACGDKWATSVALAKA-------GL---P--QPKTALATDREEALRLMEAF--------GYPVVLKPVIGSW 135 (280)
T ss_dssp EESCHHHHHHHHBHHHHHHHHHHT-------TC---C--CCCEEEESSHHHHHHHHHHH--------CSSEEEECSBCCB
T ss_pred eeCCHHHHHHhCCHHHHHHHHHHc-------Cc---C--CCCeEeeCCHHHHHHHHHHh--------CCCEEEEECCCCC
Confidence 445433334556666666655543 22 1 47777665 3444444321 2369999999999
Q ss_pred CCceEEeCChHHHHHhh------c---cCCceeeeecc
Q psy14199 455 SLDSYITDNINMVIKSA------L---TGPKIIQKYIE 483 (677)
Q Consensus 455 G~GI~I~~~l~~I~r~~------~---t~p~VVQkYIe 483 (677)
|.|+.++++.+++.... . ..++++|+||+
T Consensus 136 ~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~lvqe~i~ 173 (280)
T 1uc8_A 136 GRLLAXXXXXXXXXXXXXXKEVLGGFQHQLFYIQEYVE 173 (280)
T ss_dssp CSHHHHHHHHHC------------CTTTTCEEEEECCC
T ss_pred cccceecccccccchhhhhHhhhcccCCCcEEEEeccC
Confidence 99999998877654422 1 35789999986
No 8
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=93.74 E-value=0.073 Score=55.93 Aligned_cols=42 Identities=10% Similarity=-0.019 Sum_probs=34.4
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+---|+||..+++|+|+.+.++.+++....+ ....++|+||.
T Consensus 152 g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~~~~~~vQefI~ 198 (309)
T 1i7n_A 152 TFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFID 198 (309)
T ss_dssp CSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhccCCeEEEEeecC
Confidence 4578999999999999999999888755443 34567999995
No 9
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=93.22 E-value=0.098 Score=55.84 Aligned_cols=42 Identities=7% Similarity=-0.031 Sum_probs=33.9
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+---|+||..+++|+|+.+.++.+++....+ ....++|+||.
T Consensus 169 g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~~~~~~vQefI~ 215 (344)
T 2p0a_A 169 HFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFID 215 (344)
T ss_dssp SSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhccCCeEEEEeccC
Confidence 4478999999999999999999888765332 34567999995
No 10
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=93.19 E-value=0.37 Score=50.62 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=34.6
Q ss_pred CCceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 441 LNNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 441 ~~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
.+--+|+||.++..|.|+.++++.+++....+ ..+.++|+||.
T Consensus 176 lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~~~~~vlvE~~i~ 223 (357)
T 4fu0_A 176 LTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFEHDTEVIVEETIN 223 (357)
T ss_dssp CCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTTTCSEEEEEECCC
T ss_pred cCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhccCCeEEEEEecC
Confidence 35679999999999999999999999866442 24568888884
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=93.13 E-value=0.084 Score=54.20 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=44.9
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCCCCcccceeeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESYQDPDIRKVLLHPWFP 236 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~~~~~r~~~l~~w~~ 236 (677)
.+++-|+||-+|||.+.++.. +.-...-.++-++| |. .|| |||-||-........+....-.|+.
T Consensus 185 n~aRfiNHSC~PN~~~~~~~~-~~~~~~i~i~A~Rd-------I~--~GE-ELt~dYg~~~~~~~~~~~~ap~W~~ 249 (261)
T 2f69_A 185 SLGHKANHSFTPNCIYDMFVH-PRFGPIKCIRTLRA-------VE--ADE-ELTVAYGYDHSPPGKSGPEAPEWYQ 249 (261)
T ss_dssp CCGGGCEECSSCSEEEEEEEE-TTTEEEEEEEESSC-------BC--TTC-EEEECCCCCSCCC-----CSCHHHH
T ss_pred cceeeEeeCCCCCeEEEEEEc-CCCCcEEEEEECcc-------cC--CCC-EEEEEcCCccccccccCccCccHHH
Confidence 356789999999999998732 22123337889999 99 999 9999999776655566555556644
No 12
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=92.77 E-value=0.17 Score=50.87 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=35.7
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
+.-+|+||..++.|+|+.++++.+++....+ ..++++|+||+-
T Consensus 138 ~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~~~~~~lvee~i~g 185 (306)
T 1iow_A 138 GLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIEKWLSG 185 (306)
T ss_dssp CSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTTTCSEEEEEECCCC
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhhCCCEEEEeCcCC
Confidence 3479999999999999999999888765432 467899999973
No 13
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=92.60 E-value=0.92 Score=47.78 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=34.2
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
--+|+||.+++.|.|+.++++.+++....+ ..+.+||+||+
T Consensus 180 ~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~~~~vlVEe~I~ 225 (364)
T 3i12_A 180 LPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIK 225 (364)
T ss_dssp SSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhcCCcEEEEcCcC
Confidence 468999999999999999999988865433 35789999996
No 14
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=92.56 E-value=0.13 Score=56.25 Aligned_cols=42 Identities=12% Similarity=0.036 Sum_probs=34.3
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+---|+||..+++|+|+.+.++.+++....+ ...+++|+||.
T Consensus 264 g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~~~~~~vQEfI~ 310 (422)
T 1pk8_A 264 TYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKTYATAEPFID 310 (422)
T ss_dssp SSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHHTSCEEEEECCC
T ss_pred CCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhccCceEEEEeecC
Confidence 4478999999999999999999888765443 34567999996
No 15
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=92.44 E-value=0.069 Score=47.92 Aligned_cols=47 Identities=30% Similarity=0.554 Sum_probs=36.2
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.+|+.|+||-+||+.... .+ +..--.++-++| |. .|| |+|-||-...
T Consensus 63 ~~~~~~NHsc~pN~~~~~---~~-~~~~~~~~A~rd-------I~--~Ge-Elt~~Y~~~~ 109 (119)
T 1n3j_A 63 GFGAIFNHSKDPNARHEL---TA-GLKRMRIFTIKP-------IA--IGE-EITISYGDDY 109 (119)
T ss_dssp SSHHHHHSCSSCCCEEEE---CS-SSSCEEEEECSC-------BC--SSE-EECCCCCCCC
T ss_pred CceeeeccCCCCCeeEEE---EC-CCeEEEEEEccc-------cC--CCC-EEEEecCchh
Confidence 478999999999998775 22 222234678999 89 999 9999998553
No 16
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=91.85 E-value=0.36 Score=51.14 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=85.4
Q ss_pred HHHHHHHcCCCCEEe--CCC------CCceEEEccccc--c-----c---------hhhhhh-cCCCeEEcccccCcccc
Q psy14199 334 KYVSENLTHPRFVIV--DNE------EEADILWYTHHF--K-----D---------FKTLAE-ETPTKFVNQFPFEYILT 388 (677)
Q Consensus 334 ~~V~~~L~~~gf~~~--~~~------~~adi~W~~~~~--~-----~---------~~~l~~-~~~~Q~vNhfP~~~~Lt 388 (677)
..+.++|++.|..++ |-. ...|+++-.-+- . | ...+.. ...--.+|-+.+...+.
T Consensus 36 ~~l~~al~~~G~~~~~iD~~~~~~~~~~~Dvvi~~l~~~~~ea~~~d~~~~~~~~~l~~~~~~~~gv~vinp~~ai~~~~ 115 (346)
T 2q7d_A 36 QAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLL 115 (346)
T ss_dssp HHHHHHHHTTTCEEEECCTTSCSGGGCCCSEEEECCHHHHHHHHTTCHHHHHHHHHHHHHHHHCTTSEEESCHHHHHHTT
T ss_pred HHHHHHHHhCCcEEEEcccccchhhcCCCCEEEeCCcccccccccCchhHHHHHHHHHHHHHHCCCeEEcCCHHHHHHhh
Confidence 567888999997544 321 145777654321 0 1 111111 12345788888878888
Q ss_pred cchHHHHHHHHhHhhhhccCCCCCCCcccceeecCh----hHHHHHHHHhhhhhcCCCceEEEcCCCC--CCCCceEEeC
Q psy14199 389 IKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLKT----ELLKFMSYYQNREKKNLNNLWIIKPFNL--ARSLDSYITD 462 (677)
Q Consensus 389 rKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~~----el~~f~~~~~~~~~~g~~n~WIlKP~n~--aRG~GI~I~~ 462 (677)
.|-.+.+.+.+....... ..--+|.|+.+.. +..+.+.. .+.+--.|+||..+ +.|.|+.+..
T Consensus 116 dk~~~~~~L~k~~~~~~~-----~gIp~P~t~~~~~~~~~~~~~~~~~------~~lg~P~VvKP~~g~Gs~s~~v~~v~ 184 (346)
T 2q7d_A 116 DRSKSYELIRKIEAYMED-----DRICSPPFMELTSLCGDDTMRLLEK------NGLTFPFICKTRVAHGTNSHEMAIVF 184 (346)
T ss_dssp BHHHHHHHHHHHHHHHCB-----TTEECCCEEEECSCCCTTHHHHHHH------TTCCSSEEEECSBCSSTTCCEEEEEC
T ss_pred hHHHHHHHHHhhcccccC-----CCCCCCCEEEEeCCCHHHHHHHHHh------cCCCCCEEEEecCCCcceeeeeEEec
Confidence 998888888876421111 1123688888864 44443321 23456899999853 3488999999
Q ss_pred ChHHHHHhhccCCceeeeeccC
Q psy14199 463 NINMVIKSALTGPKIIQKYIEN 484 (677)
Q Consensus 463 ~l~~I~r~~~t~p~VVQkYIen 484 (677)
+.+++... ..+.++|+||+.
T Consensus 185 ~~~~l~~~--~~~~lvQefI~~ 204 (346)
T 2q7d_A 185 NQEGLNAI--QPPCVVQNFINH 204 (346)
T ss_dssp SGGGTTC----CCEEEEECCCC
T ss_pred CHHHHHhc--CCCEEEEEeeCC
Confidence 98887543 468999999974
No 17
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=91.57 E-value=0.091 Score=49.50 Aligned_cols=50 Identities=24% Similarity=0.257 Sum_probs=38.5
Q ss_pred cccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCCCC
Q psy14199 162 FGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESYQD 223 (677)
Q Consensus 162 ~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~~ 223 (677)
++.-|+||-+|||.+..... .+..--.++-++| |. .|| |||-||-....+
T Consensus 107 ~aRfiNHSC~PN~~~~~~~~--~~~~~i~~~A~rd-------I~--~GE-ELt~dY~~~~~~ 156 (166)
T 3f9x_A 107 LGRLINHSKCGNCQTKLHDI--DGVPHLILIASRD-------IA--AGE-ELLFDYGDRSKA 156 (166)
T ss_dssp SGGGCEECTTCSEEEEEEEE--TTEEEEEEEESSC-------BC--TTC-BCEECCCCCCHH
T ss_pred hhheeecCCCCCeeEEEEEE--CCeeEEEEEECCc-------CC--CCC-EEEEEcCCChhh
Confidence 44669999999988765443 3555566788999 99 999 999999866543
No 18
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=91.46 E-value=0.28 Score=50.03 Aligned_cols=87 Identities=18% Similarity=0.352 Sum_probs=56.5
Q ss_pred EEcccccCcccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecCh--hHHHHHHHHhhhhhcCCCceEEEcCCCCCC
Q psy14199 377 FVNQFPFEYILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLKT--ELLKFMSYYQNREKKNLNNLWIIKPFNLAR 454 (677)
Q Consensus 377 ~vNhfP~~~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~~--el~~f~~~~~~~~~~g~~n~WIlKP~n~aR 454 (677)
.+|..........|..+.+.+++. |. -.|+|+.+.. ++.++.+ + .+.+--+|+||..++.
T Consensus 86 ~~~~~~~~~~~~dK~~~~~~l~~~-------gi-----~~P~~~~~~~~~~~~~~~~---~---~~~~~P~vvKP~~g~g 147 (324)
T 1z2n_X 86 FLESSAIHDMMSSREEINALLIKN-------NI-----PIPNSFSVKSKEEVIQLLQ---S---KQLILPFIVKPENAQG 147 (324)
T ss_dssp EETCHHHHHHHTBHHHHHHHHHHT-------TC-----CCSCEEEESSHHHHHHHHH---T---TCSCSSEEEEESBCSS
T ss_pred EeCCHHHHHHHhCHHHHHHHHHHC-------CC-----CCCCEEEeCCHHHHHHHHH---H---cCCCCCEEEeeCCCCC
Confidence 456544444556676666666552 22 2577777653 3333321 1 2233579999999888
Q ss_pred C---CceEEeCChHHHHHhhccCCceeeeecc
Q psy14199 455 S---LDSYITDNINMVIKSALTGPKIIQKYIE 483 (677)
Q Consensus 455 G---~GI~I~~~l~~I~r~~~t~p~VVQkYIe 483 (677)
| .|+.+.++.+++.. ...+.++|+||+
T Consensus 148 ~~~s~gv~~v~~~~~l~~--~~~~~lvqe~i~ 177 (324)
T 1z2n_X 148 TFNAHQMKIVLEQEGIDD--IHFPCLCQHYIN 177 (324)
T ss_dssp SSGGGEEEEECSGGGGTT--CCSSEEEEECCC
T ss_pred CccceeeEEEeCHHHHhh--cCCCEEEEEccC
Confidence 9 99999999887643 256899999996
No 19
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=90.86 E-value=0.21 Score=52.74 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=31.9
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++....+ .++.++|+||+.+
T Consensus 144 g~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~lvEe~i~g~ 194 (403)
T 4dim_A 144 KLPVIVKATDLQGSKGIYIAKKEEEAIDGFNETMNLTKRDYCIVEEFIEGY 194 (403)
T ss_dssp CSSEEEECSCC-----CEEESSHHHHHHHHHHHHHHCSSSCCEEEECCCSE
T ss_pred CCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhcCcCCcEEEEEccCCc
Confidence 4569999999999999999999998765432 3679999999865
No 20
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=90.27 E-value=0.36 Score=52.03 Aligned_cols=43 Identities=23% Similarity=0.263 Sum_probs=36.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|++++++.+++....+ .++.++|+||+.|
T Consensus 157 ~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~ 210 (446)
T 3ouz_A 157 YPVILKAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNP 210 (446)
T ss_dssp SSEEEEETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSC
T ss_pred CCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 469999999999999999999988765432 5689999999976
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.59 E-value=0.71 Score=51.13 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=63.8
Q ss_pred CCchhHHHHHHHHHhhccceeecccCCCCCCcceeEeeecccccccccCCCCCeeeeeeEecCCC----------cEEEE
Q psy14199 121 SDTDDKVEQVFHEMWKYNNTYSVKSTADGDTLLPVWYIMDEFGSAIQHSDEPNMRIVPFIYLNEG----------IAYSI 190 (677)
Q Consensus 121 ~~~~~~v~~v~~~mWky~~tY~l~~~~~~~~~~~~WYi~De~Gs~i~hsd~pn~~~~pf~~~~~~----------~~ys~ 190 (677)
..+.+.+..++..++ ++++.+ ...++. .++=.-+--.+|.|+||-.||+.+.- .... ..--.
T Consensus 164 ~~~~~~l~~~~~~~~--~N~f~i-~~~~g~--~~~g~gl~p~~s~~NHSC~PN~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (490)
T 3n71_A 164 QFSMQYISHIFGVIN--CNGFTL-SDQRGL--QAVGVGIFPNLGLVNHDCWPNCTVIF---NNGNHEAVKSMFHTQMRIE 235 (490)
T ss_dssp CCCHHHHHHHHHHHH--TTEEEE-ECTTSC--SEEEEEECTTGGGCEECSSCSEEEEE---ECCCCSSSCCCGGGSCEEE
T ss_pred CCCHHHHHHHHHHHh--ccCccc-ccCCCC--ccceEEEchhhhhcccCCCCCeeEEe---cCCccccccccccccceEE
Confidence 345667778887776 577777 332211 23333444678999999999998442 2221 11456
Q ss_pred EeeeeecceeeeeeecccCCeEEEeecccCCCCcccceeeec
Q psy14199 191 LYPIIIKILIFVKFCYILGSLILTIDYVESYQDPDIRKVLLH 232 (677)
Q Consensus 191 l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~~~~~r~~~l~ 232 (677)
++-++| |. .|| |||.+|+........|+..|.
T Consensus 236 v~A~rd-------I~--~GE-EltisY~~~~~~~~~R~~~L~ 267 (490)
T 3n71_A 236 LRALGK-------IS--EGE-ELTVSYIDFLHLSEERRRQLK 267 (490)
T ss_dssp EEESSC-------BC--TTC-BCEECSSCSCSCHHHHHHHHH
T ss_pred EEECCC-------CC--CCC-EEEEeecCCCCCHHHHHHHHH
Confidence 889999 99 999 999999976666667777665
No 22
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=89.58 E-value=0.19 Score=51.43 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=36.8
Q ss_pred cccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecChhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCCh
Q psy14199 385 YILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLKTELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDNI 464 (677)
Q Consensus 385 ~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~l 464 (677)
.....|..+.+.++++ |.+ .|+|+....++.++.. . ...+.-+|+||..++.|+|++++++.
T Consensus 110 ~~~~dK~~~~~~l~~~-------gip-----~p~~~~~~~~~~~~~~---~---~~~~~P~vvKp~~g~g~~gv~~v~~~ 171 (331)
T 2pn1_A 110 ELCFDKYTMYEYCLRQ-------GIA-----HARTYATMASFEEALA---A---GEVQLPVFVKPRNGSASIEVRRVETV 171 (331)
T ss_dssp HHHHBHHHHHHHHHHH-------TCC-----CCCEESSHHHHHHHHH---T---TSSCSCEEEEESBC------------
T ss_pred HHhhCHHHHHHHHHHc-------CCC-----CCcEEecHHHhhhhhh---c---ccCCCCEEEEeCCCCCCCCeEEeCCH
Confidence 3455666666655543 222 4566665555444331 0 12345799999999999999999998
Q ss_pred HHHHHhhc-cCCceeeeeccC
Q psy14199 465 NMVIKSAL-TGPKIIQKYIEN 484 (677)
Q Consensus 465 ~~I~r~~~-t~p~VVQkYIen 484 (677)
+++....+ ..+.++|+||+-
T Consensus 172 ~el~~~~~~~~~~lvee~i~G 192 (331)
T 2pn1_A 172 EEVEQLFSKNTDLIVQELLVG 192 (331)
T ss_dssp -----------CEEEEECCCS
T ss_pred HHHHHHHHhCCCeEEEecCCC
Confidence 88765543 357899999974
No 23
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=88.76 E-value=0.8 Score=49.22 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=35.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.++|+||+.+
T Consensus 154 ~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~ 207 (449)
T 2w70_A 154 YPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENP 207 (449)
T ss_dssp SSEEEEETTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSC
T ss_pred CcEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCC
Confidence 469999999999999999999888765432 4679999999865
No 24
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=88.55 E-value=0.7 Score=49.68 Aligned_cols=43 Identities=23% Similarity=0.277 Sum_probs=35.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.+
T Consensus 152 ~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~ 205 (451)
T 1ulz_A 152 YPVLLKATAGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENP 205 (451)
T ss_dssp SSEEEEECSSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSC
T ss_pred CCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCC
Confidence 469999999999999999999888765431 4579999999865
No 25
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=88.48 E-value=0.29 Score=49.78 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=31.1
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhh----------ccCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSA----------LTGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~----------~t~p~VVQkYIen 484 (677)
.-+|+||..++.|+|+.++++.+++.... ...++++|+||+-
T Consensus 127 ~P~vvKP~~g~~s~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~lvee~i~G 178 (334)
T 2r85_A 127 KPVIVKPHGAKGGKGYFLAKDPEDFWRKAEKFLGIKRKEDLKNIQIQEYVLG 178 (334)
T ss_dssp SCEEEEECC----TTCEEESSHHHHHHHHHHHHCCCSGGGCCSEEEEECCCC
T ss_pred CCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhhcccCCCCcEEEEeccCC
Confidence 57999999999999999999998876542 1267899999985
No 26
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=88.25 E-value=0.72 Score=49.07 Aligned_cols=43 Identities=14% Similarity=0.241 Sum_probs=35.3
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.+
T Consensus 137 ~P~vvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~lvEe~i~g~ 186 (417)
T 2ip4_A 137 VPVVVKDSGLAAGKGVTVAFDLHQAKQAVANILNRAEGGEVVVEEYLEGE 186 (417)
T ss_dssp SSEEEECTTSCSSTTCEEESCHHHHHHHHHHHTTSSSCCCEEEEECCCSC
T ss_pred CCEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHhhccCCeEEEEECccCc
Confidence 479999999999999999999988765432 1578999999854
No 27
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=87.80 E-value=0.69 Score=49.23 Aligned_cols=81 Identities=9% Similarity=0.146 Sum_probs=52.9
Q ss_pred cccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecC--hhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeC
Q psy14199 385 YILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLK--TELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITD 462 (677)
Q Consensus 385 ~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~--~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~ 462 (677)
.....|..+.+.++++ |.+ .|+++.+. .++.++.+.+ +--+|+||..++.|+|+.+++
T Consensus 98 ~~~~dK~~~k~~l~~~-------gip-----~p~~~~~~~~~~~~~~~~~~--------~~PvvvKp~~g~gg~Gv~~v~ 157 (424)
T 2yw2_A 98 KLEGSKAFAKTFMKKY-------GIP-----TARYEVFTDFEKAKEYVEKV--------GAPIVVKADGLAAGKGAVVCE 157 (424)
T ss_dssp HHHHCHHHHHHHHHHT-------TCC-----BCCEEEESCHHHHHHHHHHH--------CSSEEEEESSCCTTCSEEEES
T ss_pred HHHhCHHHHHHHHHHc-------CCC-----CCCeEEECCHHHHHHHHHHc--------CCcEEEEeCCCCCCCCEEEEC
Confidence 3455666665555543 222 35555443 3444444321 346999999999999999999
Q ss_pred ChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 463 NINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 463 ~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+.+++....+ ..+.++|+||+.+
T Consensus 158 ~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~g~ 191 (424)
T 2yw2_A 158 TVEKAIETLDRFLNKKIFGKSSERVVIEEFLEGE 191 (424)
T ss_dssp SHHHHHHHHHHHHTSCTTGGGGSSEEEEECCCSE
T ss_pred CHHHHHHHHHHHHhhhhccCCCCeEEEEECCCCc
Confidence 9988765321 2578999999854
No 28
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=87.45 E-value=0.75 Score=49.67 Aligned_cols=43 Identities=23% Similarity=0.130 Sum_probs=35.7
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.+
T Consensus 158 ~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~ 211 (461)
T 2dzd_A 158 YPIIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENP 211 (461)
T ss_dssp SCEEEEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSC
T ss_pred CcEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCC
Confidence 469999999999999999999888755432 3679999999865
No 29
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=87.27 E-value=0.6 Score=48.05 Aligned_cols=52 Identities=17% Similarity=0.087 Sum_probs=39.1
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCCCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESYQD 223 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~~ 223 (677)
.+++-|+||-+|||.+.++.. |.....-.++-++| |. .|| |||-||-....+
T Consensus 239 n~ar~iNHsc~pN~~~~~~~~-~~~~~~~~~~a~r~-------I~--~ge-Elt~~Yg~~~~~ 290 (293)
T 1h3i_A 239 SLGHKANHSFTPNCIYDMFVH-PRFGPIKCIRTLRA-------VE--ADE-ELTVAYGYDHSP 290 (293)
T ss_dssp CCGGGSEEESSCSEEEEEEEE-TTTEEEEEEEESSC-------BC--TTC-EEEEEEETTBCC
T ss_pred cceeeeccCCCCCeEEEEEEc-CCCCcEEEEEECCc-------cC--CCC-EEEEecCCCCCC
Confidence 357789999999999998633 33222236889999 99 999 999999765443
No 30
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=87.06 E-value=1 Score=48.37 Aligned_cols=43 Identities=19% Similarity=0.097 Sum_probs=35.9
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.++|+||+.+
T Consensus 152 ~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~ 205 (451)
T 2vpq_A 152 YPVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENF 205 (451)
T ss_dssp SSEEEEETTCCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSE
T ss_pred CcEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCC
Confidence 469999999999999999999988765432 3679999999865
No 31
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=86.80 E-value=0.77 Score=48.09 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=31.6
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc---------cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL---------TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~---------t~p~VVQkYIen 484 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.++|+||+.
T Consensus 149 ~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~lvEe~i~~ 199 (391)
T 1kjq_A 149 YPCIVKPVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKF 199 (391)
T ss_dssp SSEEEEESCC---CCCEEECSGGGHHHHHHHHHHHSGGGCCCEEEEECCCC
T ss_pred CCEEEEeCCCCCCCCeEEECCHHHHHHHHHHHHhhcccCCCCEEEEEecCC
Confidence 469999999999999999999887754332 357999999983
No 32
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=86.72 E-value=1.1 Score=48.62 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=35.2
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIen 484 (677)
+--+|+||..++.|+|+.++++.+++....+ ..+.|+|+||+-
T Consensus 158 g~PvVvKp~~~~gg~GV~iv~~~eel~~a~~~~~~~~~~g~~~~~vlvEe~i~G 211 (442)
T 3lp8_A 158 KLPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLVHHKFGEAGCAIIIEEFLEG 211 (442)
T ss_dssp CSSEEEEESSCCTTTSEEEESSHHHHHHHHHHHHTSCTTGGGGSSEEEEECCCS
T ss_pred CCcEEEeECCCCCCCeEEEeCCHHHHHHHHHHHHhhcccCCCCCeEEEEEeecC
Confidence 3469999999999999999999988755432 257899999984
No 33
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=86.56 E-value=0.7 Score=49.14 Aligned_cols=79 Identities=13% Similarity=0.127 Sum_probs=51.7
Q ss_pred ccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecC--hhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCC
Q psy14199 386 ILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLK--TELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDN 463 (677)
Q Consensus 386 ~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~--~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~ 463 (677)
....|..+.+.++++ |.+ .|+++.+. .++.++.+.+ +--+|+||..++.|+|+.++++
T Consensus 99 ~~~dK~~~k~~l~~~-------gip-----~p~~~~~~~~~~~~~~~~~~--------~~P~vvKp~~~~~g~Gv~~v~~ 158 (422)
T 2xcl_A 99 IEGSKQFAKDLMKKY-------DIP-----TAEYETFTSFDEAKAYVQEK--------GAPIVIKADGLAAGKGVTVAMT 158 (422)
T ss_dssp HHHCHHHHHHHHHHT-------TCC-----BCCEEEESCHHHHHHHHHHH--------CSSEEEEESSCGGGTCEEEESS
T ss_pred HhcCHHHHHHHHHHc-------CCC-----CCCeEEECCHHHHHHHHHhc--------CCCEEEEeCCCCCCCcEEEECC
Confidence 445666665555443 222 35555443 3454444321 3469999999999999999999
Q ss_pred hHHHHHhhc-----------cCCceeeeeccC
Q psy14199 464 INMVIKSAL-----------TGPKIIQKYIEN 484 (677)
Q Consensus 464 l~~I~r~~~-----------t~p~VVQkYIen 484 (677)
.+++....+ ..+.++|+||+-
T Consensus 159 ~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~g 190 (422)
T 2xcl_A 159 EEEAIACLHDFLEDEKFGDASASVVIEEYLSG 190 (422)
T ss_dssp HHHHHHHHHHHHTSCTTGGGGSSEEEEECCCS
T ss_pred HHHHHHHHHHHHhhhhccCCCCeEEEEECCcC
Confidence 888765321 257899999974
No 34
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=86.45 E-value=0.52 Score=48.11 Aligned_cols=50 Identities=22% Similarity=0.208 Sum_probs=37.8
Q ss_pred cccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCCCCc
Q psy14199 160 DEFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESYQDP 224 (677)
Q Consensus 160 De~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~~~ 224 (677)
-..++-|+||=+||+.++.+ .+. --.++-++| |. .|| |||-||.......
T Consensus 174 ~~~ar~iNHSC~PN~~~~~~----~~~-~i~v~A~rd-------I~--~GE-Elt~~Y~~~~~~~ 223 (247)
T 3rq4_A 174 LGPAAFINHDCKPNCKFVPA----DGN-AACVKVLRD-------IE--PGD-EVTCFYGEGFFGE 223 (247)
T ss_dssp ESGGGGCEECSSCSEEEEEE----TTT-EEEEEESSC-------BC--TTC-BCEECCCTTSSSG
T ss_pred cchhhhcCCCCCCCEEEEEe----CCC-EEEEEECCc-------CC--CCC-EEEEecCchhcCC
Confidence 35688999999999976653 222 335688999 99 999 9999999664433
No 35
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=86.22 E-value=0.81 Score=45.51 Aligned_cols=48 Identities=27% Similarity=0.303 Sum_probs=38.7
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVES 220 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~ 220 (677)
.++.-|+||-+||+.+.+... ++..--.++-++| |. .|| |||-||-..
T Consensus 145 n~aRfiNHSC~PN~~~~~~~~--~~~~~i~~~A~Rd-------I~--~GE-ELT~dY~~~ 192 (222)
T 3ope_A 145 NEARFINHSCDPNCEMQKWSV--NGVYRIGLYALKD-------MP--AGT-ELTYDYNFH 192 (222)
T ss_dssp CGGGGCEECSSCSEEEEEEEE--TTEEEEEEEESSC-------BC--TTC-BCEECTTSS
T ss_pred ccceeeccCCCCCeEeEEEEE--CCeEEEEEEECCc-------cC--CCC-EEEEECCCc
Confidence 456679999999999887543 4555566889999 99 999 999999854
No 36
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=86.17 E-value=0.83 Score=44.73 Aligned_cols=49 Identities=24% Similarity=0.257 Sum_probs=37.1
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.+++-|+||-+||+.+..+.. +|..--.++-++| |. .|| |||-||-...
T Consensus 123 n~arfiNHSC~PN~~~~~~~~--~g~~~i~i~A~rd-------I~--~GE-ELt~dY~~~~ 171 (192)
T 2w5y_A 123 NAARFINHSCEPNCYSRVINI--DGQKHIVIFAMRK-------IY--RGE-ELTYDYKFPI 171 (192)
T ss_dssp CGGGGCEECSSCSEEEEEEEE--TTEEEEEEEESSC-------BC--TTC-EEEECCCC--
T ss_pred ChhHhhccCCCCCEEEEEEEE--CCcEEEEEEECcc-------cC--CCC-EEEEEcCCch
Confidence 456779999999998765433 3444456788999 99 999 9999998654
No 37
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=85.59 E-value=0.93 Score=45.47 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=39.0
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.++.-|+||-+||+.+..+.. .+..--.++-++| |. .|| |||-||-...
T Consensus 164 n~aRfiNHSC~PN~~~~~~~~--~~~~~i~~~A~Rd-------I~--~GE-ELT~dY~~~~ 212 (232)
T 3ooi_A 164 NYARFMNHCCQPNCETQKWSV--NGDTRVGLFALSD-------IK--AGT-ELTFNYNLEC 212 (232)
T ss_dssp CGGGGCEECSSCSEEEEEEEE--TTEEEEEEEESSC-------BC--TTC-BCEECCTTCS
T ss_pred cccccccccCCCCeEEEEEEE--CCceEEEEEECCc-------cC--CCC-EEEEECCCCc
Confidence 456779999999999887553 3445567889999 99 999 9999997543
No 38
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=85.50 E-value=0.39 Score=48.61 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=31.4
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+-
T Consensus 134 ~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~~~~~lvee~i~G 180 (307)
T 3r5x_A 134 FPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEWDSEVVIEKYIKG 180 (307)
T ss_dssp SSEEEEECC----CCCEEECSHHHHHHHHHHHHHHCSEEEEEECCCS
T ss_pred CCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCEEEECCcCC
Confidence 469999999999999999999988765433 367899999983
No 39
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=85.49 E-value=0.87 Score=47.57 Aligned_cols=50 Identities=22% Similarity=0.340 Sum_probs=38.7
Q ss_pred ccccccccCCCCCeeeeeeEecC--CCcEEEEEeeeeecceeeeeeecccCCeEEEeecccC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLN--EGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVES 220 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~--~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~ 220 (677)
.++.-|+||-+||+.+.+.+.-. .+..--.++-++| |. .|| |||-||-..
T Consensus 214 N~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rd-------I~--~GE-ELt~dY~~~ 265 (300)
T 2r3a_A 214 NVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRT-------IN--AGE-ELTFDYQMK 265 (300)
T ss_dssp CGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSC-------BC--TTC-EEEECGGGS
T ss_pred ChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccC-------CC--CCC-EEEEECCCC
Confidence 46678999999999988765432 2334456788999 99 999 999999854
No 40
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=85.42 E-value=0.68 Score=48.23 Aligned_cols=51 Identities=31% Similarity=0.318 Sum_probs=37.6
Q ss_pred ccccccccCCCCCeeeeeeEec--CCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYL--NEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~--~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.++.-|+||-+||+.+.+...- ..+..--.+|-++| |. .|| |||-||..+.
T Consensus 219 N~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rd-------I~--~Ge-ELt~dY~~~~ 271 (302)
T 1ml9_A 219 GPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKD-------IP--KGT-ELTFDYVNGL 271 (302)
T ss_dssp CGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSC-------BC--TTC-EEEECTTC--
T ss_pred CHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCC-------cC--CCC-EEEEEECCCc
Confidence 5677899999999998754321 12333456889999 89 999 9999998553
No 41
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=85.21 E-value=0.51 Score=49.50 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=35.3
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+
T Consensus 171 g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~~~~~~lvEe~I~ 217 (364)
T 2i87_A 171 NYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVN 217 (364)
T ss_dssp CSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHTTCSEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhcCCeEEEEeCcc
Confidence 3479999999999999999999988765432 36789999997
No 42
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=85.12 E-value=1 Score=48.64 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=30.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIen 484 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.++|+||+-
T Consensus 159 ~PvVvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~G 211 (451)
T 2yrx_A 159 APIVIKADGLAAGKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEG 211 (451)
T ss_dssp SSEEEEECC----CCEEEESSHHHHHHHHHHHHHHSCCBTTBCCEEEEECCCS
T ss_pred CcEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhccccCCCCCeEEEEECCcC
Confidence 469999999999999999999888765321 257899999984
No 43
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=84.48 E-value=1.9 Score=46.90 Aligned_cols=89 Identities=15% Similarity=0.172 Sum_probs=59.2
Q ss_pred CchhHHHHHHHHHhhccceeecccCCCCCCcceeEeeecccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceee
Q psy14199 122 DTDDKVEQVFHEMWKYNNTYSVKSTADGDTLLPVWYIMDEFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIF 201 (677)
Q Consensus 122 ~~~~~v~~v~~~mWky~~tY~l~~~~~~~~~~~~WYi~De~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~ 201 (677)
++.+.+-.++..+ -++++.+ ...+ ..++=.-+--.+|.++||-.||+... |. |... .++.++|
T Consensus 167 ~~~~~i~~~~~~~--~~N~f~i-~~~~---~~~~g~gl~p~~s~~NHsC~PN~~~~---~~--~~~~-~~~a~r~----- 229 (433)
T 3qww_A 167 PDHSSLVVLFAQV--NCNGFTI-EDEE---LSHLGSAIFPDVALMNHSCCPNVIVT---YK--GTLA-EVRAVQE----- 229 (433)
T ss_dssp CCHHHHHHHHHHH--HHHCEEE-ECTT---CCEEEEEECTTGGGSEECSSCSEEEE---EE--TTEE-EEEESSC-----
T ss_pred CCHHHHHHHHHHH--cCCceec-ccCC---ccceeEEecccccccCCCCCCCceEE---Ec--CCEE-EEEeccC-----
Confidence 4555555555554 3577777 3222 12332334468899999999998763 22 3332 6889999
Q ss_pred eeeecccCCeEEEeecccCCCCcccceeeec
Q psy14199 202 VKFCYILGSLILTIDYVESYQDPDIRKVLLH 232 (677)
Q Consensus 202 ~~~~~~~g~~~~trd~~~~~~~~~~r~~~l~ 232 (677)
|. .|| |||.+|.........|+..|.
T Consensus 230 --I~--~Ge-el~i~Y~~~~~~~~~R~~~L~ 255 (433)
T 3qww_A 230 --IH--PGD-EVFTSYIDLLYPTEDRNDRLR 255 (433)
T ss_dssp --BC--TTC-EEEECCSCTTSCHHHHHHHHH
T ss_pred --cC--CCC-EEEEeecCCcCCHHHHHHHHh
Confidence 99 999 999999976666667776664
No 44
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=84.45 E-value=1 Score=48.63 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=31.8
Q ss_pred ce-EEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 443 NL-WIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~-WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
-- +|+||..++.|+|+.++++.+++....+ ..+.++|+||+-+
T Consensus 164 ~P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~~~~g~~~~~~lvEe~i~G~ 218 (452)
T 2qk4_A 164 FPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQEKAFGAAGETIVIEELLDGE 218 (452)
T ss_dssp SCEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC-------CCEEEEECCCSE
T ss_pred CCeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhhhhccCCCCeEEEEECCCCC
Confidence 35 9999999999999999999988765421 2578999999843
No 45
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=84.34 E-value=0.83 Score=47.65 Aligned_cols=56 Identities=23% Similarity=0.235 Sum_probs=41.8
Q ss_pred Eeeec-----ccccccccCCCCCeeeeeeEecC--CCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 156 WYIMD-----EFGSAIQHSDEPNMRIVPFIYLN--EGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 156 WYi~D-----e~Gs~i~hsd~pn~~~~pf~~~~--~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.|++| .++.-|+||-+||+.+.+...-. .+..--.++-++| |. .|| |||-||-...
T Consensus 202 ~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rd-------I~--~GE-ELt~dY~~~~ 264 (299)
T 1mvh_A 202 EYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKD-------IQ--PLE-ELTFDYAGAK 264 (299)
T ss_dssp CEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSC-------BC--TTC-BCEECCCTTS
T ss_pred cEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccC-------cC--CCC-EEEEEcCCcc
Confidence 35566 56778999999999988755421 2334446788999 99 999 9999998553
No 46
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=84.29 E-value=1.4 Score=47.51 Aligned_cols=42 Identities=10% Similarity=0.106 Sum_probs=34.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIen 484 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.|+|+||+-
T Consensus 143 ~PvVvKp~~~~gg~GV~iv~~~~el~~a~~~~~~~~~~g~~~~~vlvEe~i~G 195 (431)
T 3mjf_A 143 APIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDG 195 (431)
T ss_dssp SSEEEEESSSCTTCSEEEECSHHHHHHHHHHHHTTHHHHCCCCCEEEEECCCS
T ss_pred CeEEEEECCCCCCCcEEEeCCHHHHHHHHHHHHhhccccCCCCeEEEEEeeCC
Confidence 469999999999999999999988765432 247899999984
No 47
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=84.05 E-value=1.1 Score=47.85 Aligned_cols=41 Identities=15% Similarity=0.077 Sum_probs=28.3
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc---------cCCceeeeecc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL---------TGPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~---------t~p~VVQkYIe 483 (677)
--+|+||..++.|+|+.++++.+++....+ ..+.++|+||+
T Consensus 157 ~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~lvEe~i~ 206 (433)
T 2dwc_A 157 YPCHTKAIMSSSGKGSYFVKGPEDIPKAWEEAKTKARGSAEKIIVEEHID 206 (433)
T ss_dssp SSEEEEECCC------EEECSGGGHHHHHHC---------CCEEEEECCC
T ss_pred CCEEEEECCCcCCCCeEEECCHHHHHHHHHHHHhhcccCCCCEEEEccCC
Confidence 469999999999999999999888765432 35789999998
No 48
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=84.04 E-value=1.4 Score=46.50 Aligned_cols=42 Identities=14% Similarity=0.118 Sum_probs=35.3
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+-
T Consensus 175 ~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~~~~vlvEe~I~G 221 (377)
T 1ehi_A 175 NIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNG 221 (377)
T ss_dssp SCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTTTCSCEEEEECCCC
T ss_pred CCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Confidence 468999999999999999999988766432 357899999974
No 49
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=83.38 E-value=0.51 Score=49.48 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=31.7
Q ss_pred CceEEEcCCCCC-CCCceEEeCChHHHHHhhccCCceeeeecc
Q psy14199 442 NNLWIIKPFNLA-RSLDSYITDNINMVIKSALTGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~a-RG~GI~I~~~l~~I~r~~~t~p~VVQkYIe 483 (677)
+--+|+||..++ .|+|+.++++.+++....+ .+.++|+||+
T Consensus 132 ~~P~vvKp~~~~y~g~Gv~~v~~~~el~~~~~-~~~lvEe~i~ 173 (380)
T 3ax6_A 132 GFPVVQKARKGGYDGRGVFIIKNEKDLENAIK-GETYLEEFVE 173 (380)
T ss_dssp CSSEEEEESCCC-----EEEECSGGGGGGCCC-SSEEEEECCC
T ss_pred CCCEEEEecCCCCCCCCeEEECCHHHHHHHhc-CCEEEEeccC
Confidence 347999999999 9999999999998865544 7899999997
No 50
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=83.27 E-value=1.5 Score=45.48 Aligned_cols=50 Identities=24% Similarity=0.393 Sum_probs=38.6
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESY 221 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~ 221 (677)
.++.-|+||-+||+.+.+... ..+..--.++-++| |. .|| |||-||-...
T Consensus 204 N~arfiNHSC~PN~~~~~~~~-~~~~~~i~~~A~rd-------I~--~GE-ELt~dY~~~~ 253 (290)
T 3bo5_A 204 NIGRFLNHSCEPNLLMIPVRI-DSMVPKLALFAAKD-------IV--PEE-ELSYDYSGRY 253 (290)
T ss_dssp CGGGGCEECSSCSEEEEEEES-SSSSCEEEEEESSC-------BC--TTC-EEEECTTSCT
T ss_pred CchheeeecCCCCEEEEEEEe-CCCceEEEEEEccc-------cC--CCC-EEEEECCCcc
Confidence 567789999999999887543 22223346788999 88 999 9999998654
No 51
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=83.03 E-value=0.99 Score=46.66 Aligned_cols=48 Identities=25% Similarity=0.280 Sum_probs=37.5
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVES 220 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~ 220 (677)
.++.-|+||-+||+.+..+.. .+..--.++-++| |. .|| |||-||-..
T Consensus 189 N~aRFiNHSC~PN~~~~~~~v--~g~~ri~~fA~Rd-------I~--~GE-ELT~dY~~~ 236 (278)
T 3h6l_A 189 NCSRFMNHSCEPNCETQKWTV--NGQLRVGFFTTKL-------VP--SGS-ELTFDYQFQ 236 (278)
T ss_dssp CGGGGCEECSSCSEEEEEEEE--TTEEEEEEEESSC-------BC--TTC-BCEECCTTT
T ss_pred ChhhhcccCCCCCceeEEEEe--CCceEEEEEECCc-------cC--CCC-EEEEecCCC
Confidence 456779999999998776543 3444556889999 99 999 999999743
No 52
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=82.71 E-value=1.5 Score=50.29 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=48.3
Q ss_pred cccccchHHHHHHHHhHhhhhccCCCCCCCccccee-ecChhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCC
Q psy14199 385 YILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTY-NLKTELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDN 463 (677)
Q Consensus 385 ~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf-~L~~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~ 463 (677)
-++.+|..|+-....+. ..+ +++.|| .-+.+ + . ..-||+||..+..|.||.|.+.
T Consensus 493 ~llsNKailalLw~l~p---------~hp-~LLpT~f~~~~~---l----~-------~~~yV~KPi~gReG~nV~i~~~ 548 (619)
T 2io8_A 493 VIPGNKAILPILWSLFP---------HHR-YLLDTDFTVNDE---L----V-------KTGYAVKPIAGRCGSNIDLVSH 548 (619)
T ss_dssp GTTTSTTHHHHHHHHST---------TCT-TCCCEESSCCHH---H----H-------HHCEEEEETTCCTTTTCEEECT
T ss_pred HHhhhHHHHHHHHHhCC---------CCC-CCCCeeecCCcc---c----c-------cCCEEEccCCCCCCCCEEEEeC
Confidence 36888888887666542 233 455555 32221 1 1 1249999999999999999986
Q ss_pred hHHHHH----hhccCCceeeeeccCc
Q psy14199 464 INMVIK----SALTGPKIIQKYIENP 485 (677)
Q Consensus 464 l~~I~r----~~~t~p~VVQkYIenP 485 (677)
-.+... ....+++|.|+|+.-|
T Consensus 549 ~~~~~~~~~~~y~~~~~IyQe~~~lp 574 (619)
T 2io8_A 549 HEEVLDKTSGKFAEQKNIYQQLWCLP 574 (619)
T ss_dssp TSCEEEECCCTTTTSCEEEEECCCCC
T ss_pred CChhHhhccccccCCCeEEEEecCCC
Confidence 222111 1123678999999755
No 53
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=82.41 E-value=0.8 Score=47.28 Aligned_cols=43 Identities=12% Similarity=0.190 Sum_probs=35.6
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
+--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+-
T Consensus 150 g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~~~~~vlvEe~I~G 197 (322)
T 2fb9_A 150 DPPFFVKPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSP 197 (322)
T ss_dssp CSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTTTCSEEEEEECCSS
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 3479999999999999999999988766432 356899999974
No 54
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=82.20 E-value=1.6 Score=46.74 Aligned_cols=41 Identities=10% Similarity=0.139 Sum_probs=33.9
Q ss_pred ceEEEcCCCCC-CCCceEEeCChHHHHHhh---ccCCceeeeecc
Q psy14199 443 NLWIIKPFNLA-RSLDSYITDNINMVIKSA---LTGPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~a-RG~GI~I~~~l~~I~r~~---~t~p~VVQkYIe 483 (677)
--+|+||..++ .|+|+.++++.+++.... ...+.++|+||.
T Consensus 161 ~P~VvKp~~gg~~g~Gv~~v~~~~el~~a~~~~~~~~~lvEe~i~ 205 (403)
T 3k5i_A 161 YPLMLKSKTMAYDGRGNFRVNSQDDIPEALEALKDRPLYAEKWAY 205 (403)
T ss_dssp SSEEEEESSSCCTTTTEEEECSTTSHHHHHHHTTTSCEEEEECCC
T ss_pred CCEEEEeCCCCcCCCCEEEECCHHHHHHHHHhcCCCcEEEecCCC
Confidence 46899999886 899999999988876543 356899999997
No 55
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=82.02 E-value=1.7 Score=45.82 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=34.5
Q ss_pred ceEEEcCCCCCC-CCceEEeCChHHHHHhhc---cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLAR-SLDSYITDNINMVIKSAL---TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aR-G~GI~I~~~l~~I~r~~~---t~p~VVQkYIen 484 (677)
--+|+||..+.. |+|+.++++.+++....+ .++.++|+||+.
T Consensus 148 ~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~~~~~~lvEe~i~g 193 (389)
T 3q2o_A 148 YPSVLKTTTGGYDGKGQVVLRSEADVDEARKLANAAECILEKWVPF 193 (389)
T ss_dssp SSEEEEESSCCSSSCCEEEESSGGGHHHHHHHHHHSCEEEEECCCC
T ss_pred CCEEEEeCCCCCCCCCeEEECCHHHHHHHHHhcCCCCEEEEecccC
Confidence 468999999865 899999999988765432 478999999984
No 56
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=81.72 E-value=0.99 Score=47.09 Aligned_cols=42 Identities=5% Similarity=0.003 Sum_probs=31.2
Q ss_pred CceEEEcCCCCC-CCCceEEeCChHHHHHhhc---cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLA-RSLDSYITDNINMVIKSAL---TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~a-RG~GI~I~~~l~~I~r~~~---t~p~VVQkYIe 483 (677)
+--+|+||..++ .|+|++++++.+++....+ ..+.++|+||+
T Consensus 131 g~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~~~~~~lvEe~i~ 176 (369)
T 3aw8_A 131 GLPALLKTRRGGYDGKGQALVRTEEEALEALKALGGRGLILEGFVP 176 (369)
T ss_dssp CSSEEEEECCC------EEEECSHHHHHHHHTTTCSSSEEEEECCC
T ss_pred CCCEEEEEcCCCCCcceEEEECCHHHHHHHHHhcCCCcEEEEEcCC
Confidence 457999999999 9999999999998876544 36789999997
No 57
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=81.63 E-value=1.1 Score=50.04 Aligned_cols=43 Identities=14% Similarity=-0.038 Sum_probs=36.0
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.+
T Consensus 235 ~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~~~~~vlvEe~i~g~ 284 (554)
T 1w96_A 235 FPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRA 284 (554)
T ss_dssp SSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHSTTCCEEEEECCCSC
T ss_pred CCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhccCCCEEEEEecCCC
Confidence 469999999999999999999988765432 4679999999864
No 58
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=81.44 E-value=0.78 Score=49.75 Aligned_cols=86 Identities=24% Similarity=0.304 Sum_probs=57.9
Q ss_pred hHHHHHHHHHhhccceeecccCCCCCCcceeEeeecccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeee
Q psy14199 125 DKVEQVFHEMWKYNNTYSVKSTADGDTLLPVWYIMDEFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKF 204 (677)
Q Consensus 125 ~~v~~v~~~mWky~~tY~l~~~~~~~~~~~~WYi~De~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~ 204 (677)
+.+-.++..+. ++++.+ ...+ ..++=.-+--.+|.|+||-.||+... | . |... .+.-++| |
T Consensus 170 ~~~~~~~~~~~--~N~f~i-~~~~---~~~~g~~l~~~~s~~NHsC~PN~~~~-~--~--~~~~-~~~a~r~-------I 230 (429)
T 3qwp_A 170 FDLFEAFAKVI--CNSFTI-CNAE---MQEVGVGLYPSISLLNHSCDPNCSIV-F--N--GPHL-LLRAVRD-------I 230 (429)
T ss_dssp CCHHHHHHHHH--HHCEEE-ECTT---SCEEEEEECTTGGGCEECSSCSEEEE-E--E--TTEE-EEEECSC-------B
T ss_pred HHHHHHHHHHH--hcCccc-cccc---cccceEEEchhhHhhCcCCCCCeEEE-E--e--CCEE-EEEEeee-------E
Confidence 34556666665 466777 3221 12222333456899999999999865 2 1 3333 4678999 9
Q ss_pred ecccCCeEEEeecccCCCCcccceeeec
Q psy14199 205 CYILGSLILTIDYVESYQDPDIRKVLLH 232 (677)
Q Consensus 205 ~~~~g~~~~trd~~~~~~~~~~r~~~l~ 232 (677)
. .|| |||.+|.........|+..|.
T Consensus 231 ~--~Ge-El~isY~~~~~~~~~R~~~L~ 255 (429)
T 3qwp_A 231 E--VGE-ELTICYLDMLMTSEERRKQLR 255 (429)
T ss_dssp C--TTC-EEEECCSCSSCCHHHHHHHHH
T ss_pred C--CCC-EEEEEecCCCCCHHHHHHHHh
Confidence 9 999 999999977666677777665
No 59
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=81.03 E-value=0.67 Score=47.46 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=30.0
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+.
T Consensus 147 ~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~~~~~lvEe~i~~ 193 (317)
T 4eg0_A 147 LPLFVKPASEGSSVAVLKVKTADALPAALSEAATHDKIVIVEKSIEG 193 (317)
T ss_dssp SCEEEEECC-----CCEEECSGGGHHHHHHHHTTTCSEEEEEECCCS
T ss_pred CCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 468999999999999999999988765432 356899999983
No 60
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=80.51 E-value=1.6 Score=46.21 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=35.0
Q ss_pred CceEEEcCCCCC-CCCceEEeCChHHHHHhh---ccCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLA-RSLDSYITDNINMVIKSA---LTGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~a-RG~GI~I~~~l~~I~r~~---~t~p~VVQkYIen 484 (677)
+--+|+||..++ .|+|+.++++.+++.... ...+.|+|+||+-
T Consensus 145 g~P~vvKp~~gg~~g~Gv~~v~~~~el~~a~~~~~~~~~ivEe~i~g 191 (377)
T 3orq_A 145 GYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNI 191 (377)
T ss_dssp CSSEEEEESSSCCTTTTEEEECSTTSHHHHHHHHTTSCEEEEECCCE
T ss_pred CCCEEEEeCCCCCCCCCeEEECCHHHHHHHHHhcCCCcEEEEccCCC
Confidence 346899999986 899999999988876543 2478999999984
No 61
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=80.46 E-value=1.6 Score=48.10 Aligned_cols=81 Identities=11% Similarity=0.142 Sum_probs=52.7
Q ss_pred ccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecC--hhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCC
Q psy14199 386 ILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLK--TELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDN 463 (677)
Q Consensus 386 ~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~--~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~ 463 (677)
....|..+.+.+++. |.+ .|+++.+. .++.++.+. .+--.|+||..++.|+|+.+.++
T Consensus 136 ~~~DK~~~k~~l~~~-------GIp-----vp~~~~v~s~ee~~~~~~~--------lg~PvVVKP~~g~gg~Gv~iv~~ 195 (474)
T 3vmm_A 136 NARDKNKMRDAFNKA-------GVK-----SIKNKRVTTLEDFRAALEE--------IGTPLILKPTYLASSIGVTLITD 195 (474)
T ss_dssp HTTCHHHHHHHHHHT-------TSC-----CCCEEEECSHHHHHHHHHH--------SCSSEEEEESSCCTTTTCEEECC
T ss_pred HhhCHHHHHHHHHHc-------CCC-----CCCeEEECCHHHHHHHHHH--------cCCCEEEEECCCCcCceEEEECC
Confidence 456666666555543 232 34555444 344443332 23468999999999999999999
Q ss_pred hHHHHHhhc-----------------cCCceeeeeccCcc
Q psy14199 464 INMVIKSAL-----------------TGPKIIQKYIENPI 486 (677)
Q Consensus 464 l~~I~r~~~-----------------t~p~VVQkYIenPl 486 (677)
.+++.+..+ ..+.++|+||+.+-
T Consensus 196 ~eel~~a~~~~~~~~~~~~~~~a~~~~~~vlVEe~I~G~e 235 (474)
T 3vmm_A 196 TETAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFLQGEY 235 (474)
T ss_dssp TTSHHHHHHHHHHHHTTSCCCTTCCCSCSEEEEECCCBCH
T ss_pred HHHHHHHHHHHHHHHhhccccccccCCCeEEEEeCCCCce
Confidence 887654321 35789999999764
No 62
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=79.34 E-value=1.2 Score=50.68 Aligned_cols=44 Identities=9% Similarity=-0.047 Sum_probs=36.8
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++....+ .++.++|+||+.|
T Consensus 244 GyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~~~~~vlVEeyI~g~ 294 (587)
T 3jrx_A 244 GFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHA 294 (587)
T ss_dssp CSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHSTTCCEEEEECCCSC
T ss_pred CCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhccCCCEEEEEecCCC
Confidence 3468999999999999999999888765432 4689999999985
No 63
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=78.71 E-value=1.5 Score=45.43 Aligned_cols=49 Identities=22% Similarity=0.315 Sum_probs=38.5
Q ss_pred ccccccccCCCCCeeeeeeEecCC--CcEEEEEeeeeecceeeeeeecccCCeEEEeeccc
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNE--GIAYSILYPIIIKILIFVKFCYILGSLILTIDYVE 219 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~--~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~ 219 (677)
.++.-|+||-+||+.+...+.... +..--.++-++| |. .|| |||-||-.
T Consensus 215 N~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~Rd-------I~--~GE-ELT~dYg~ 265 (287)
T 3hna_A 215 NVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRL-------IE--AGE-QLGFDYGE 265 (287)
T ss_dssp CGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSC-------BC--TTC-BCEECCCH
T ss_pred CchheeeecCCCCceeEEEEEecCCCCceeEEEEEcce-------eC--CCC-eEEEeCCC
Confidence 567788999999999877665432 234556788999 99 999 99999974
No 64
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=78.69 E-value=1.1 Score=46.29 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=35.7
Q ss_pred ccccccccCCCCCeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccCCC
Q psy14199 161 EFGSAIQHSDEPNMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVESYQ 222 (677)
Q Consensus 161 e~Gs~i~hsd~pn~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~~~ 222 (677)
..++-|+||=+||+.++. . +..--.++-++| |. .|| |||-||.....
T Consensus 204 ~~arfiNHSC~PN~~~~~---~--~~~~i~i~A~Rd-------I~--~GE-ELt~~Y~~~~~ 250 (273)
T 3s8p_A 204 GPAAFINHDCRPNCKFVS---T--GRDTACVKALRD-------IE--PGE-EISCYYGDGFF 250 (273)
T ss_dssp SGGGGCEECSSCSEEEEE---E--ETTEEEEEESSC-------BC--TTC-BCEECCCTTTT
T ss_pred chHHhhCCCCCCCeEEEE---c--CCCEEEEEECce-------eC--CCC-EEEEecCchhc
Confidence 457899999999998642 1 221235788999 99 999 99999986543
No 65
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=78.57 E-value=1.5 Score=47.25 Aligned_cols=42 Identities=10% Similarity=-0.091 Sum_probs=35.2
Q ss_pred ceEEEcCC-CCCCCCceEEeCChHHHHHhhc---cCCceeeeeccC
Q psy14199 443 NLWIIKPF-NLARSLDSYITDNINMVIKSAL---TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~-n~aRG~GI~I~~~l~~I~r~~~---t~p~VVQkYIen 484 (677)
--+|+||. .++.|+|+.++++.+++....+ .++.++|+||+.
T Consensus 172 ~P~VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~~~~~~lvEe~i~~ 217 (419)
T 4e4t_A 172 LPGILKTARLGYDGKGQVRVSTAREARDAHAALGGVPCVLEKRLPL 217 (419)
T ss_dssp CSEEEEESSSCCTTTTEEEECSHHHHHHHHHHTTTCCEEEEECCCE
T ss_pred CCEEEEecCCCCCCCceEEECCHHHHHHHHHhcCCCcEEEeecCCC
Confidence 46899999 7899999999999998865443 468999999974
No 66
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=78.49 E-value=1.8 Score=46.17 Aligned_cols=42 Identities=10% Similarity=0.095 Sum_probs=34.8
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
--+|+||.+++.|.|+.++++.+++....+ ..+.+||+||.-
T Consensus 199 ~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~~~~vlVEe~I~G 245 (386)
T 3e5n_A 199 LPLFVKPANQGSSVGVSQVRTADAFAAALALALAYDHKVLVEAAVAG 245 (386)
T ss_dssp SSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTTTCSEEEEEECCCS
T ss_pred CCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 468999999999999999999988765432 356899999973
No 67
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=78.01 E-value=1.3 Score=47.08 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=35.2
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+--+|+||.+++.|.||.++++.+++....+ ..+.+||+||+
T Consensus 188 g~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~~~~vlVEe~I~ 234 (373)
T 3lwb_A 188 GLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAIS 234 (373)
T ss_dssp CSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTTCSSEEEEECCE
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCEEEeCCCC
Confidence 3468999999999999999999988865432 46789999997
No 68
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=78.01 E-value=0.76 Score=47.35 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=26.7
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhccCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSALTGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~t~p~VVQkYIen 484 (677)
+.-||+||..++.|.|+.++++ ...+.++|+||+-
T Consensus 133 ~~P~vvKP~~g~gs~Gv~~v~~--------~~~~~lvEe~I~G 167 (305)
T 3df7_A 133 DCKFIIKPRTACAGEGIGFSDE--------VPDGHIAQEFIEG 167 (305)
T ss_dssp SSSEEEEESSCC----CBCCSS--------CCTTEEEEECCCS
T ss_pred CCCEEEEeCCCCCCCCEEEEec--------CCCCEEEEeccCC
Confidence 4569999999999999999988 4678999999983
No 69
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=77.99 E-value=1.4 Score=46.97 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=31.0
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc----------------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL----------------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~----------------t~p~VVQkYIenP 485 (677)
+--+|+||..++-|+|++++++.+++....+ ..+.++|+||+-+
T Consensus 145 g~P~vvKp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G~ 204 (425)
T 3vot_A 145 SYPLVVKPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDGP 204 (425)
T ss_dssp CSSEEEEESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCSC
T ss_pred CCcEEEEECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecCc
Confidence 4468999999999999999999988765321 3468999999865
No 70
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=77.56 E-value=1.5 Score=46.77 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=33.8
Q ss_pred ce-EEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 443 NL-WIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 443 n~-WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
-- +|+||.++..|.||.++++.+++....+ ..+.+||+||+
T Consensus 180 ~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~~~~~vlVEe~I~ 226 (372)
T 3tqt_A 180 TSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFRYDDRLMVEPRIR 226 (372)
T ss_dssp --CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTTTCSCEEEEECCC
T ss_pred CCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 45 9999999999999999999998865432 35789999997
No 71
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=77.56 E-value=1.2 Score=49.98 Aligned_cols=44 Identities=9% Similarity=-0.047 Sum_probs=32.7
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.|
T Consensus 228 gyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~~~~~vlVEe~I~g~ 278 (540)
T 3glk_A 228 GFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIPGSPIFLMKLAQHA 278 (540)
T ss_dssp CSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHSTTCCEEEEECCSSE
T ss_pred CCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhccCCCEEEEEecCCC
Confidence 3468999999999999999999888765432 4679999999875
No 72
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=77.20 E-value=1.8 Score=50.64 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=34.7
Q ss_pred CceEEEcCCCCCCCCceEEeC---ChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITD---NINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~---~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+.-+|+||..++.|+|+.+++ +.+++....+ ..+.+||+||.
T Consensus 520 g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~~~~vlVEefI~ 569 (750)
T 3ln6_A 520 DKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTEDSAILVEEYIE 569 (750)
T ss_dssp SSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhhCCcEEEEeccC
Confidence 467999999999999999998 7777765443 35789999996
No 73
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=76.54 E-value=0.95 Score=47.08 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=14.1
Q ss_pred ceEEEcCCCCC-CCCceEEeCChHHHHHhhc----cCCceeeeecc
Q psy14199 443 NLWIIKPFNLA-RSLDSYITDNINMVIKSAL----TGPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~a-RG~GI~I~~~l~~I~r~~~----t~p~VVQkYIe 483 (677)
--+|+||..++ .|+|+.++++.+++....+ ..+.++|+||+
T Consensus 127 ~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~~~~~~~lvEe~i~ 172 (365)
T 2z04_A 127 LPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHDKEESFIIEEFVK 172 (365)
T ss_dssp -CEEEECC------------------------------CEEEECCC
T ss_pred CCEEEEEcCCCcCCCCeEEECCHHHHHHHHHHhccCCCEEEEccCC
Confidence 46999999999 9999999999888765432 35789999997
No 74
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=76.02 E-value=1.5 Score=46.78 Aligned_cols=43 Identities=26% Similarity=0.433 Sum_probs=34.9
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccC
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIEN 484 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIen 484 (677)
+--+|+||..++.|+|+.++++.+++....+ .++.++|+||+-
T Consensus 141 g~PvvvKp~~~~gg~Gv~~v~~~~el~~a~~~~~~~~~~~g~~~~vlvEe~i~G 194 (412)
T 1vkz_A 141 SPPYVIKADGLARGKGVLILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLAG 194 (412)
T ss_dssp CSSEEEEESSCCSSCCEEEESSHHHHHHHHHHHHHTSSSTTCCSCEEEEECCCS
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhhccccCCCCeEEEEECCcC
Confidence 4579999999999999999999988765321 137899999973
No 75
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=75.81 E-value=2.1 Score=49.42 Aligned_cols=78 Identities=17% Similarity=0.109 Sum_probs=33.4
Q ss_pred cccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecChhHHHHHHHHhhhhhcCCCceEEEcCCCCCCCCceEEeCCh
Q psy14199 385 YILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLKTELLKFMSYYQNREKKNLNNLWIIKPFNLARSLDSYITDNI 464 (677)
Q Consensus 385 ~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~~el~~f~~~~~~~~~~g~~n~WIlKP~n~aRG~GI~I~~~l 464 (677)
.++.+|..|+-.-..+. ..+ +++.||--+... . . ..-||+||..+-.|.||.|...-
T Consensus 508 ~LlsNKaiLalLW~l~p---------~hp-~LLpt~f~~~~~---~---~-------~~~yV~KPi~gReG~nV~I~~~~ 564 (652)
T 2vob_A 508 VIPSNKAILPMIYHNHP---------EHP-AILKAEYELTDE---L---R-------KHGYAKKPIVGRVGSNVIITSGD 564 (652)
T ss_dssp GTTTSTTHHHHHHHHCT---------TCT-TBCCEESSCCHH---H---H-------HHCEEEEECC-------------
T ss_pred HhhcCHHHHHHHHhccc---------CCC-CCCchhhcCCCc---c---c-------cCCeEeccCCCCCCCCEEEEcCC
Confidence 47788888877555433 233 556666222211 0 0 12499999999999999998753
Q ss_pred HHHHHh----hccCCceeeeeccCc
Q psy14199 465 NMVIKS----ALTGPKIIQKYIENP 485 (677)
Q Consensus 465 ~~I~r~----~~t~p~VVQkYIenP 485 (677)
.++... ...+++|+|+|++-|
T Consensus 565 ~~~~~~~~g~y~~~~~IyQe~~~lp 589 (652)
T 2vob_A 565 GVVHAESGGKYGKRNMIYQQLFELK 589 (652)
T ss_dssp --------------CEEEEECCC--
T ss_pred chhhhhcccccCCCCeEEEecccCC
Confidence 332211 124689999999855
No 76
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=75.09 E-value=1.6 Score=46.24 Aligned_cols=44 Identities=23% Similarity=0.330 Sum_probs=35.8
Q ss_pred CCceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeeccC
Q psy14199 441 LNNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIEN 484 (677)
Q Consensus 441 ~~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIen 484 (677)
.+--+|+||..++.|.|+.++++.+++....+ ..+.+||+||+-
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~~~~~vlVEe~I~G 232 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQG 232 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTTTCSCEEEEECCTT
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhcCCcEEEEeCCCC
Confidence 34579999999999999999999887765432 357899999974
No 77
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=74.72 E-value=2.8 Score=49.14 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=34.4
Q ss_pred CceEEEcCCCCCCCCceEEe----CChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYIT----DNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~----~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+--.|+||..++.|+||.++ ++.+++....+ ....+||+||.
T Consensus 525 g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~~~~vlVEefI~ 575 (757)
T 3ln7_A 525 NRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFREDKEVMVEDYLV 575 (757)
T ss_dssp SSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHHCSSEEEEECCC
T ss_pred CCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 45799999999999999998 78887765432 46789999995
No 78
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=74.58 E-value=1.4 Score=47.22 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=29.5
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----t~p~VVQkYIe 483 (677)
+--+|+||.+++.|.|+.++++.+++....+ ..+.+||+||+
T Consensus 201 g~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~~~~vlVEe~I~ 247 (383)
T 3k3p_A 201 IYPVFVKPANMGSSVGISKAENRTDLKQAIALALKYDSRVLIEQGVD 247 (383)
T ss_dssp CSSEEEEECC------CEEESSHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 4569999999999999999999998865433 35789999997
No 79
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=74.37 E-value=0.93 Score=48.99 Aligned_cols=28 Identities=43% Similarity=0.707 Sum_probs=25.0
Q ss_pred cccceeEEEEEeeccchhhhhhcccccccC
Q psy14199 497 VKFDVRYVVLVKSVKPLKVYLYKNFFLRDD 526 (677)
Q Consensus 497 ~kfd~r~~vl~~~~~~~~~~~~~~~~~~~~ 526 (677)
+|||+|.|||+++ |+++|+|+..+.|=+
T Consensus 200 rKFDlR~Yvlvts--~l~vy~y~~g~~Rfa 227 (380)
T 3tig_A 200 RKFDIRSWVLVDN--QYNIYLYREGVLRTS 227 (380)
T ss_dssp BCEEEEEEEEECT--TCCEEECSCCEEEEC
T ss_pred ceeEEEEEEEEcC--CCEEEEEcCCEEEec
Confidence 4999999999998 899999998887665
No 80
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=73.52 E-value=1.9 Score=49.77 Aligned_cols=44 Identities=9% Similarity=0.130 Sum_probs=31.0
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+--.|+||..++.|+|++++++.+++....+ .++.++|+||+.|
T Consensus 178 gyPvvvKp~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~ 232 (675)
T 3u9t_A 178 GYPVLLKAAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKP 232 (675)
T ss_dssp CSSBCCBCCC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSC
T ss_pred CCcEEEEECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCC
Confidence 3468999999999999999999988876543 3578999999987
No 81
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=68.86 E-value=4.9 Score=48.62 Aligned_cols=43 Identities=5% Similarity=0.113 Sum_probs=27.3
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
--+|+||..+..|+|+.++++.+++.+..+ ..+.++|+||+.+
T Consensus 710 ~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~~~~~~vlvEefI~g~ 759 (1073)
T 1a9x_A 710 YPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDA 759 (1073)
T ss_dssp SSEEEEC-------CEEEECSHHHHHHHHHHCC--------EEEBCCTTC
T ss_pred CCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhhCCCCcEEEEEccCCC
Confidence 468999999999999999999998876542 2579999999987
No 82
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=68.62 E-value=0.94 Score=47.63 Aligned_cols=41 Identities=10% Similarity=0.265 Sum_probs=21.2
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc--cCCceeeeecc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL--TGPKIIQKYIE 483 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~--t~p~VVQkYIe 483 (677)
+---|+||..++.|+|+.+.++ +++....+ ++++|+|+||.
T Consensus 125 ~~PviVKp~~g~ggkG~~~v~~-eel~~~~~~~~~~~IiEEfI~ 167 (320)
T 2pbz_A 125 DELYFVRIEGPRGGSGHFIVEG-SELEERLSTLEEPYRVERFIP 167 (320)
T ss_dssp SCCEEEECC------------C-EECSCCCC----CCEEEECCC
T ss_pred CCcEEEEECCCCCCCCEEEECh-HHHHHHHHhcCCCEEEEeeec
Confidence 4568999999999999999999 88754332 15789999997
No 83
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=65.34 E-value=3.6 Score=42.64 Aligned_cols=42 Identities=17% Similarity=0.257 Sum_probs=30.0
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhccCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSALTGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++.. .....++|+||.-+
T Consensus 125 g~P~vvKp~~g~g~~gv~~v~~~~~~~~--~~~~~~~ee~i~g~ 166 (363)
T 4ffl_A 125 KPPYFVKPPCESSSVGARIIYDDKDLEG--LEPDTLVEEYVEGE 166 (363)
T ss_dssp SSCEEEECSSCCTTTTCEEEC------C--CCTTCEEEECCCSE
T ss_pred CCCEEEEECCCCCCcCeEEeccHHHhhh--hccchhhhhhccCc
Confidence 3468999999999999999999888753 24678999999754
No 84
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=65.26 E-value=1.5 Score=50.70 Aligned_cols=44 Identities=16% Similarity=0.065 Sum_probs=3.6
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+--.|+||..++.|+|++++++.+++....+ .++.++|+||+.|
T Consensus 152 gyPvVvKp~~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~ 206 (681)
T 3n6r_A 152 GYPVMIKASAGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQP 206 (681)
T ss_dssp ---------------------------------------------------CCSC
T ss_pred CCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCC
Confidence 3468999999999999999999888765432 2478999999987
No 85
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=62.88 E-value=9.4 Score=46.21 Aligned_cols=43 Identities=16% Similarity=-0.018 Sum_probs=36.1
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc-------cCCceeeeeccCc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL-------TGPKIIQKYIENP 485 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-------t~p~VVQkYIenP 485 (677)
--+|+||..+..|+|+.+.++.+++..... .++.++|+||..+
T Consensus 164 ~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~~~~~vlvEe~I~G~ 213 (1073)
T 1a9x_A 164 FPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGW 213 (1073)
T ss_dssp SSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred CCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhCCCCcEEEEEccCCC
Confidence 468999999999999999999988766432 2578999999876
No 86
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=60.62 E-value=6.1 Score=37.01 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=35.5
Q ss_pred Eeeeccc-------ccccccCCCC---CeeeeeeEecCCCcEEEEEeeeeecceeeeeeecccCCeEEEeecccC
Q psy14199 156 WYIMDEF-------GSAIQHSDEP---NMRIVPFIYLNEGIAYSILYPIIIKILIFVKFCYILGSLILTIDYVES 220 (677)
Q Consensus 156 WYi~De~-------Gs~i~hsd~p---n~~~~pf~~~~~~~~ys~l~p~~~~~~~~~~~~~~~g~~~~trd~~~~ 220 (677)
||+.|-. +.-|+||-+| ||..+. ..+. -.++-++| |. .|+ |+|-||-..
T Consensus 86 ~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~----~~~~--I~~~A~Rd-------I~--~GE-EL~~dY~~~ 144 (149)
T 2qpw_A 86 WMCIDATDPEKGNWLRYVNWACSGEEQNLFPLE----INRA--IYYKTLKP-------IA--PGE-ELLVWYNGE 144 (149)
T ss_dssp EEEEECSSGGGSCGGGGCEECBTTBTCCEEEEE----ETTE--EEEEESSC-------BC--TTC-BCEECCCCC
T ss_pred eEEEeCCCCCCCcceeeeeccCChhhcCEEEEE----ECCE--EEEEEccC-------CC--CCC-EEEEccCCc
Confidence 6767654 4568999999 887743 1222 24678899 88 999 999999743
No 87
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=60.57 E-value=4.2 Score=43.31 Aligned_cols=41 Identities=17% Similarity=0.146 Sum_probs=31.1
Q ss_pred ceEEEcCCCCCCCCceEEeCChHHHHHhhc----------c--CCceeeeecc
Q psy14199 443 NLWIIKPFNLARSLDSYITDNINMVIKSAL----------T--GPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~----------t--~p~VVQkYIe 483 (677)
--.|+||..++.|+|+.++++.+++....+ + .+.|+|+||+
T Consensus 151 ~PvVVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~~~~~~~~~~~viIEEfl~ 203 (361)
T 2r7k_A 151 GTVIVKFPGARGGRGYFIASSTEEFYKKAEDLKKRGILTDEDIANAHIEEYVV 203 (361)
T ss_dssp SCEEEECSCCCC---EEEESSHHHHHHHHHHHHHTTSCCHHHHHHCEEEECCC
T ss_pred CCEEEeeCCCCCCCCEEEECCHHHHHHHHHHHHhccccccCCCCeEEEEeccc
Confidence 478999999999999999999998765431 1 4689999997
No 88
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=58.55 E-value=2.8 Score=51.36 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=28.3
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.|
T Consensus 155 GyPvVVKP~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~ 209 (1150)
T 3hbl_A 155 GFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNP 209 (1150)
T ss_dssp CSSEEEECCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSC
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCC
Confidence 4568999999999999999999877654332 3578999999987
No 89
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=49.32 E-value=7.4 Score=41.14 Aligned_cols=53 Identities=11% Similarity=0.047 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHhhhhhcCCCceEEEcCCCC-CCCCceEEeCC--hHHHHHhhccCCceeeeeccC
Q psy14199 423 KTELLKFMSYYQNREKKNLNNLWIIKPFNL-ARSLDSYITDN--INMVIKSALTGPKIIQKYIEN 484 (677)
Q Consensus 423 ~~el~~f~~~~~~~~~~g~~n~WIlKP~n~-aRG~GI~I~~~--l~~I~r~~~t~p~VVQkYIen 484 (677)
..|+.++.+.+ +--.|+||..+ +-|+|+.++++ .+++...... +.|+++||+.
T Consensus 103 ~~e~~~~~~~~--------G~P~VvKp~~~G~~GkGv~~v~~~~~~el~~a~~~-~vivEe~I~~ 158 (355)
T 3eth_A 103 RSEWPAVFDRL--------GELAIVKRRTGGYDGRGQWRLRANETEQLPAECYG-ECIVEQGINF 158 (355)
T ss_dssp GGGHHHHHHHH--------CSEEEEEESSSCCTTTTEEEEETTCGGGSCGGGTT-TEEEEECCCC
T ss_pred HHHHHHHHHHc--------CCCEEEEecCCCCCCCeEEEEcCCCHHHHHHHhhC-CEEEEEccCC
Confidence 35666655432 34689999985 88999999999 8887543222 6999999974
No 90
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=48.91 E-value=8.4 Score=40.78 Aligned_cols=100 Identities=12% Similarity=0.177 Sum_probs=55.8
Q ss_pred CCCeEEcccccCcccccchHHHHHHHHhHhhhhccCCCCCCCcccceeecChhHH-----HHHHH--HhhhhhcCCCceE
Q psy14199 373 TPTKFVNQFPFEYILTIKDLLSIVCRRNSKDIEKTTLQTSPDWLPTTYNLKTELL-----KFMSY--YQNREKKNLNNLW 445 (677)
Q Consensus 373 ~~~Q~vNhfP~~~~LtrKd~L~~~l~~~~~~~~~~~~~~~~~~~P~Tf~L~~el~-----~f~~~--~~~~~~~g~~n~W 445 (677)
+.--.||...--..+..|-.....|.+.. .+ .|+|..+..+-. .|++. +.+...+..+.-+
T Consensus 81 r~p~~INd~~~q~~~~DK~~~~~iL~~~g-------IP-----tP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPf 148 (330)
T 3t7a_A 81 RNPFVINDLNMQYLIQDRREVYSILQAEG-------IL-----LPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPF 148 (330)
T ss_dssp HCCEESBCSTHHHHHTBHHHHHHHHHHTT-------CC-----CCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSE
T ss_pred hCCceeCCHHHHHHHHHHHHHHHHHHHcC-------CC-----CCCEEEEeCCCCCccccceeccchhhhhccccccCCe
Confidence 44457898888888887777777666632 22 466666654321 11110 0000001123568
Q ss_pred EEcCCCCC-----------CCCce-EEeCChHHH-------HHhhccCCceeeeeccC
Q psy14199 446 IIKPFNLA-----------RSLDS-YITDNINMV-------IKSALTGPKIIQKYIEN 484 (677)
Q Consensus 446 IlKP~n~a-----------RG~GI-~I~~~l~~I-------~r~~~t~p~VVQkYIen 484 (677)
|.||..++ +|.|. ++++....- ......+.+++|+||..
T Consensus 149 VeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~vr~~~~~i~QEFI~~ 206 (330)
T 3t7a_A 149 VEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPT 206 (330)
T ss_dssp EEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSCCSSSCEEEEECCCC
T ss_pred eEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhhccCCcEEEEeccCC
Confidence 88888885 78887 666432210 01123568999999974
No 91
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=47.58 E-value=4.1 Score=49.96 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=4.9
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+--+|+||..++.|+|++++++.+++....+ ..+.++|+||+.+
T Consensus 171 gyPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg 225 (1165)
T 2qf7_A 171 GYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERA 225 (1165)
T ss_dssp -------------------------------------------------CCCSSE
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCC
Confidence 3468999999999999999999888755432 2468999999864
No 92
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=41.67 E-value=5.8 Score=48.92 Aligned_cols=44 Identities=7% Similarity=0.087 Sum_probs=1.2
Q ss_pred CceEEEcCCCCCCCCceEEeCChHHHHHhhc-----------cCCceeeeeccCc
Q psy14199 442 NNLWIIKPFNLARSLDSYITDNINMVIKSAL-----------TGPKIIQKYIENP 485 (677)
Q Consensus 442 ~n~WIlKP~n~aRG~GI~I~~~l~~I~r~~~-----------t~p~VVQkYIenP 485 (677)
+--.|+||..++.|+|++++++.+++....+ ..+.++|+||+.|
T Consensus 180 GyPvVVKP~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~ 234 (1236)
T 3va7_A 180 EYPVMVKSTAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNA 234 (1236)
T ss_dssp -----------------------------------------------------CC
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCC
Confidence 3457999999999999999999888765432 2468999999974
No 93
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=25.12 E-value=22 Score=34.89 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=30.6
Q ss_pred ceEEEcCCCC-----CCCCceEE-eCChHHHHHhhc--------------cCCceeeeecc
Q psy14199 443 NLWIIKPFNL-----ARSLDSYI-TDNINMVIKSAL--------------TGPKIIQKYIE 483 (677)
Q Consensus 443 n~WIlKP~n~-----aRG~GI~I-~~~l~~I~r~~~--------------t~p~VVQkYIe 483 (677)
--.++||..+ +.|.|+.+ .++.+++....+ ....+||+||.
T Consensus 57 ~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~vlVEe~i~ 117 (238)
T 1wr2_A 57 YPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHENAKKYRPDAEILGVLVAPMLK 117 (238)
T ss_dssp SSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCCCEEEEEECCC
T ss_pred CCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHHhhhhhCCCCccceEEEEECCC
Confidence 4579999988 66788888 688888754321 14589999997
Done!