BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1420
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0P5A2|COQ5_BOVIN 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Bos taurus GN=COQ5 PE=2 SV=1
Length = 330
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 143/283 (50%), Gaps = 69/283 (24%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
+Y+VFE+VAK YD MND MS GIHR+WKD+ + ++ P T+LLDVAGGT +A F
Sbjct: 68 VYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIA---FRF 124
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQID-IPNPRLRFLEANAEELPIE 123
Y Q Q QL A Q ++ E R++ N+ D + + + N E L I
Sbjct: 125 LNYVQAQHQRKQKR-QLRAQQNLSWE---EIARKYQNEEDSLGGSHVMVCDINKEMLKIG 180
Query: 124 SDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR 183
A G L ++ +AEELP + + + YTIAFGIRNVT
Sbjct: 181 KQKARAQGYKAG----------------LAWILGDAEELPFDDNKFDVYTIAFGIRNVTH 224
Query: 184 IDKALSEAYRVLKPGGRFLCLEF------------------------------------- 206
ID+AL EA+RVLKPGGRFLCLEF
Sbjct: 225 IDQALQEAHRVLKPGGRFLCLEFSQVNNPLLSRLYDVYSFQVIPVLGEVIAGDWKSYQYL 284
Query: 207 --------SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S EEFK MIE AGFQ VTYENLT G+VAIHSGFKL
Sbjct: 285 VESIRQFPSQEEFKEMIEDAGFQKVTYENLTSGIVAIHSGFKL 327
>sp|Q5HYK3|COQ5_HUMAN 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Homo sapiens GN=COQ5 PE=1 SV=2
Length = 327
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 145/283 (51%), Gaps = 69/283 (24%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
+Y+VFE+VAK YD MND MS GIHR+WKD+ + ++ P T+LLDVAGGT +A F
Sbjct: 68 VYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIA---FRF 124
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQID-IPNPRLRFLEANAEELPIE 123
Y Q Q QL A Q ++ E +++ N+ D + R+ + N E L +
Sbjct: 125 LNYVQSQHQRKQKR-QLRAQQNLSWE---EIAKEYQNEEDSLGGSRVVVCDINKEMLKVG 180
Query: 124 SDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR 183
+A G R L ++ +AEELP + D + YTIAFGIRNVT
Sbjct: 181 KQK----ALAQGYR------------AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTH 224
Query: 184 IDKALSEAYRVLKPGGRFLCLEF------------------------------------- 206
ID+AL EA+RVLKPGGRFLCLEF
Sbjct: 225 IDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYL 284
Query: 207 --------SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S EEFK MIE AGF VTYE+LT G+VAIHSGFKL
Sbjct: 285 VESIRRFPSQEEFKDMIEDAGFHKVTYESLTSGIVAIHSGFKL 327
>sp|Q5RBK6|COQ5_PONAB 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Pongo abelii GN=COQ5 PE=2 SV=1
Length = 327
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 145/283 (51%), Gaps = 69/283 (24%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
+Y+VFE+VAK YD MND MS GIHR+WKD+ + ++ P T+LLDVAGGT +A F
Sbjct: 68 VYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIA---FRF 124
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQID-IPNPRLRFLEANAEELPIE 123
Y Q Q QL A Q ++ E +++ N+ D + R+ + N E L +
Sbjct: 125 LNYVQSQHQRKQKR-QLRAQQNLSWE---EIAKEYQNEEDSLGGSRVVMCDINKEMLKVG 180
Query: 124 SDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR 183
+A G R L ++ +AEELP + D + YTIAFGIRNVT
Sbjct: 181 KQK----ALAQGYR------------AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTH 224
Query: 184 IDKALSEAYRVLKPGGRFLCLEF------------------------------------- 206
ID+AL EA+RVLKPGGRFLCLEF
Sbjct: 225 IDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYL 284
Query: 207 --------SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S EEFK MIE AGF VTYE+LT G+VAIHSGFKL
Sbjct: 285 VESIRRFPSQEEFKEMIEDAGFHKVTYESLTSGIVAIHSGFKL 327
>sp|Q9VYF8|COQ5_DROME 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Drosophila melanogaster GN=coq5 PE=1 SV=1
Length = 301
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 136/295 (46%), Gaps = 113/295 (38%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
++EVFE VA SYD MNDAMS GIHR+WKD+F++RLGPTH +LLD+AGGT +
Sbjct: 62 VHEVFEQVANSYDVMNDAMSLGIHRVWKDVFVERLGPTHGMRLLDMAGGTGDI------- 114
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQI-------------DIPNPRLR 111
+F+ + + Q +P V I Q + + N +
Sbjct: 115 ------TFRYLRYLNNQPNPQQRPSHVTVSDINQHMLNVGEERAKRLGLTTDQLSNCTVA 168
Query: 112 FLEANAEELPIESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSA 171
+ A+AE+LP S++AYTIAFGIRN T +DK+
Sbjct: 169 WQCADAEKLPFPDASFTAYTIAFGIRNCTHVDKV-------------------------- 202
Query: 172 YTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH----------------------- 208
LSEAYRVL+PGGRF+CLEFSH
Sbjct: 203 ----------------LSEAYRVLQPGGRFMCLEFSHLTNETMQWLYDQYSFQVIPPMGQ 246
Query: 209 ----------------------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E+FK MIE AGF V+YENLTFGVV+IHSGFKL
Sbjct: 247 LLAGQWQAYQYLVESIRRFPKQEQFKQMIEQAGFDQVSYENLTFGVVSIHSGFKL 301
>sp|Q4G064|COQ5_RAT 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Rattus norvegicus GN=Coq5 PE=2 SV=1
Length = 327
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 143/285 (50%), Gaps = 73/285 (25%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLAN--LLF 62
+Y+VF++VA+ YD MND MS GIHR WKD+ I ++ P T+LLDVAGGT +A L +
Sbjct: 68 VYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSY 127
Query: 63 VLRAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQID-IPNPRLRFLEANAEELP 121
V +++ + + L W+ E R++ ++ D + + + N E L
Sbjct: 128 VQTQHERKQRRQLRTRQNL---SWE------EIARKYQSKEDPLGGSLVMVCDINREMLK 178
Query: 122 IESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV 181
+ A G L ++ +AEELP + D + YTIAFGIRNV
Sbjct: 179 VGKQKALARGHTAG----------------LAWVLGDAEELPFDDDRFDVYTIAFGIRNV 222
Query: 182 TRIDKALSEAYRVLKPGGRFLCLEFSH--------------------------------- 208
T ID+AL EA+RVLKPGGRFLCLEFS
Sbjct: 223 THIDRALQEAHRVLKPGGRFLCLEFSQVNDPLISRLYDLYSFQVIPVIGEVIAGDWKSYQ 282
Query: 209 ------------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
EEFK MIE AGFQ VTYE+LT G+VAIHSGFKL
Sbjct: 283 YLVESIRKFPNQEEFKDMIEDAGFQKVTYESLTSGIVAIHSGFKL 327
>sp|Q5ZLL5|COQ5_CHICK 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Gallus gallus GN=COQ5 PE=2 SV=1
Length = 311
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 143/283 (50%), Gaps = 68/283 (24%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLA-NLLFV 63
+Y+VFENVA+ YD MND+MS GIHR+WKDI + ++ P+ T L+DVAGGT +A L
Sbjct: 51 IYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNY 110
Query: 64 LRAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
+R+ + Q Q ++ W+ + + P + + ++ + N E L +
Sbjct: 111 VRSVRERQLQQKLRHHQNLS--WQEISKSYQEEKSNP----LGDSQVVVCDINKEML--K 162
Query: 124 SDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR 183
+ A + + + L ++ NAEEL + D + YTIAFGIRNVTR
Sbjct: 163 AGKQKAQHLGY--------------SEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTR 208
Query: 184 IDKALSEAYRVLKPGGRFLCLEFSH----------------------------------- 208
ID AL EAYRVLKPGGRFLCLEFSH
Sbjct: 209 IDLALQEAYRVLKPGGRFLCLEFSHVSNPLLSRLYDLYSFQVIPVLGEVIAGDWKSYQYL 268
Query: 209 ----------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
EE K+MIE AGF V Y+NL G+VAIHSGFKL
Sbjct: 269 VESIRRFPPQEELKAMIEDAGFLKVDYQNLNSGIVAIHSGFKL 311
>sp|Q4V7R3|COQ5_XENLA 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Xenopus laevis GN=coq5 PE=2 SV=1
Length = 310
Score = 167 bits (422), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 140/288 (48%), Gaps = 78/288 (27%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
+Y+VFENVA +YD MNDAMS G+HR WKD + + PT +LLD+AGGT +
Sbjct: 50 VYKVFENVAHNYDIMNDAMSLGVHRFWKDWLLQLMKPTPGMQLLDMAGGTGDI------- 102
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQ-FPNQIDIPNPRLRFLEANAEELPIE 123
SF+ I I Q + + IRQ Q D+ P + N EE +
Sbjct: 103 ------SFRFI----NYIRAQREKW------IRQELKFQQDLSWPDISKTYQNKEEGSLM 146
Query: 124 SD-----SYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGI 178
+ + G++ R+ + L ++ +AEELP D + YTIAFGI
Sbjct: 147 GSRAVICDINKEMLKVGLQKSLRLGY----SEGLSWVAGDAEELPFGDDKFDVYTIAFGI 202
Query: 179 RNVTRIDKALSEAYRVLKPGGRFLCLEFSH------------------------------ 208
RNVT I++AL EAYRVLKPGGRFLCLEFSH
Sbjct: 203 RNVTHIEQALQEAYRVLKPGGRFLCLEFSHVNNPLLSKIYDVYSFQVIPVLGEVIAKDWK 262
Query: 209 ---------------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
EEFK+MIE AGF V Y NLT GVVA+HSGFKL
Sbjct: 263 SYQYLVESIRRFPSQEEFKAMIEDAGFSKVNYHNLTSGVVAVHSGFKL 310
>sp|Q9CXI0|COQ5_MOUSE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Mus musculus GN=Coq5 PE=2 SV=2
Length = 327
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 141/285 (49%), Gaps = 73/285 (25%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLAN--LLF 62
+Y+VFENVAK YD MND MS GIHR WKD+ I ++ P T+LLD+AGGT +A L +
Sbjct: 68 VYQVFENVAKKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDMAGGTGDIAFRFLSY 127
Query: 63 VLRAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRL-RFLEANAEELP 121
V + + + + L W+ E +++ N+ D L + N E L
Sbjct: 128 VQAQHQRRQRRQLRTQQNL---SWE------EIAKKYQNEEDSLGGSLATVCDINREMLK 178
Query: 122 IESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNV 181
+ G L ++ +AEELP + DS+ YTIAFGIRNV
Sbjct: 179 VGKQKALDQGHTAG----------------LAWVLGDAEELPFDDDSFDVYTIAFGIRNV 222
Query: 182 TRIDKALSEAYRVLKPGGRFLCLEF----------------------------------- 206
T ID+AL EA+RVLKPGGRFLCLEF
Sbjct: 223 THIDQALQEAHRVLKPGGRFLCLEFGQVNDPLISRLYDLYSFQVIPVIGEVIAGDWKSYQ 282
Query: 207 ----------SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
+ E+FK MIE AGFQ VTYENLT G+VAIHSGFKL
Sbjct: 283 YLVESIRKFPNQEDFKDMIEDAGFQRVTYENLTTGIVAIHSGFKL 327
>sp|Q54VN2|COQ5_DICDI 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Dictyostelium discoideum GN=coq5 PE=3 SV=1
Length = 314
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 138/282 (48%), Gaps = 76/282 (26%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
+VF++V+ SYD MND MS GIHRLWKD I+ L PT + LLDVAGGT ++ R
Sbjct: 62 DVFDSVSSSYDLMNDVMSMGIHRLWKDELINTLNPTPGSHLLDVAGGTGDIS-----FRF 116
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
D+ + S FPN N L++++ LP +
Sbjct: 117 LDK----------------------IKTSPNYFPNINKSNNGGGEVLKSSS--LPSSATV 152
Query: 127 Y--SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
+ + + G + D +P + +++ N+E+LP + ++++ YT++FGIRN T I
Sbjct: 153 FDINQSMLNEGKKRGLNKGYTDQSDPSIDWVQGNSEQLPFKDNTFNCYTVSFGIRNCTNI 212
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
D+ L EAYRVLKPGGRFLCLEFS
Sbjct: 213 DQVLREAYRVLKPGGRFLCLEFSQVPNPLLRFAYDQYSFNVIPIMGQLISGDRDSYSYLV 272
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E F MI+ AGF+ VTY+NLTFG+ +IHSGFKL
Sbjct: 273 ESIRKFPDQETFVQMIQDAGFKQVTYKNLTFGICSIHSGFKL 314
>sp|A9MCZ2|UBIE_BRUC2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=ubiE PE=3 SV=1
Length = 269
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 128/282 (45%), Gaps = 102/282 (36%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA------ 96
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
F+++ V G+ + L+ N L
Sbjct: 97 -------FRIVEVSGR--------------------------QAHVTILDINGSML---- 119
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
G+ I K I N L F+EANAEELP E +S+ AYTIAFGIRNV I
Sbjct: 120 ----------GVGRERAIKKGLIDN--LEFVEANAEELPFEDNSFDAYTIAFGIRNVPHI 167
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
DKALSEAYRVLKPGGRFLCLEFS
Sbjct: 168 DKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLV 227
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
++F +MIE AGF+ V+Y N T G+ A+HSG+KL
Sbjct: 228 ESIRKFPKQQDFAAMIEKAGFERVSYRNFTGGIAALHSGWKL 269
>sp|Q8FUZ3|UBIE_BRUSU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella suis biovar 1 (strain 1330) GN=ubiE PE=3
SV=1
Length = 269
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 128/282 (45%), Gaps = 102/282 (36%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLTPSKRPGWTSLDVAGGTGDIA------ 96
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
F+++ V G+ + L+ N L
Sbjct: 97 -------FRIVEVSGR--------------------------QAHVTILDINGSML---- 119
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
G+ I K I N L F+EANAEELP E +S+ AYTIAFGIRNV I
Sbjct: 120 ----------GVGRERAIKKGLIDN--LEFVEANAEELPFEDNSFDAYTIAFGIRNVPHI 167
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
DKALSEAYRVLKPGGRFLCLEFS
Sbjct: 168 DKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIGKMITGDADSYSYLV 227
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
++F +MIE AGF+ V+Y N T G+ A+HSG+KL
Sbjct: 228 ESIRKFPKQQDFAAMIEKAGFERVSYRNFTGGIAALHSGWKL 269
>sp|Q66L51|COQ5_DANRE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Danio rerio GN=coq5 PE=2 SV=1
Length = 327
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 125/302 (41%), Gaps = 107/302 (35%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLF-- 62
+Y+VFE+VAK YD MNDAMS GIHRLWKD + + P +LLD AGGT ++
Sbjct: 68 VYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEY 127
Query: 63 ---------VLRAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPR---- 109
LRA Q + + G ++ + P Q + + R
Sbjct: 128 TRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDA 187
Query: 110 -----LRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPI 164
L ++ +AEELP + D + YTIAFGIRNVT I
Sbjct: 188 GITTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHI---------------------- 225
Query: 165 ESDSYSAYTIAFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFS----------------- 207
++AL EA+RVLKPGGRF+CLEFS
Sbjct: 226 --------------------EQALQEAFRVLKPGGRFMCLEFSKVTNPLLARLYDAYSFQ 265
Query: 208 ----------------------------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
E FK MIE AGF V Y NLT G+VAIHSGF
Sbjct: 266 MIPVLGEVIAGDWKSYQYLVESIRKFPDQEIFKEMIEDAGFFRVQYFNLTGGIVAIHSGF 325
Query: 240 KL 241
KL
Sbjct: 326 KL 327
>sp|Q8UIH5|UBIE_AGRT5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=ubiE PE=3 SV=1
Length = 259
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 134/245 (54%), Gaps = 28/245 (11%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
EVF VAK YD MND MS G+HRLWKD + L P D K+LDVAGGT +A ++
Sbjct: 33 EVFHKVAKRYDIMNDVMSAGLHRLWKDAMVSALSPRKDPSYKILDVAGGTGDVA--FRII 90
Query: 65 RAYDQYSF-QVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
A ++ + V+ + G ++A V R ++ + L F+EANAEELP E
Sbjct: 91 EASNRLAHATVLDINGSMLA---------VGEERAAKKKL---SDNLTFVEANAEELPFE 138
Query: 124 SDSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
++++ AYT+AFGIRNV RID ++ RL LE + ++P+ Y A++
Sbjct: 139 ANTFDAYTVAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDMPLLDRVYDAWSFN- 197
Query: 177 GIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIH 236
I ++ +E Y+ L R + E+F +MI +AGF VTY N T G+ A+H
Sbjct: 198 AIPQFGKMITGDAEPYQYLVESIRKFP---NQEDFATMIRTAGFSRVTYTNYTGGIAALH 254
Query: 237 SGFKL 241
SG+KL
Sbjct: 255 SGWKL 259
>sp|B8IJ00|UBIE_METNO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=ubiE PE=3 SV=1
Length = 252
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 123/282 (43%), Gaps = 103/282 (36%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP--THDTKLLDVAGGTDPLANLLFVL 64
EVF +VA+ YD MND MS G+HR WK I L P T +LLDVAGGT +A
Sbjct: 26 EVFRSVARRYDVMNDLMSGGLHRAWKSALISALRPSRTRPFRLLDVAGGTGDIA------ 79
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
F+ + G P + L+ N L +
Sbjct: 80 -------FRALQAGG--------------------------PETHVTVLDINDAMLAVGR 106
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
+ G R RID F+ NAE LP+ S+ AYTIAFGIRNV RI
Sbjct: 107 ERA-------GDRFAGRID----------FVAGNAEALPLPDGSFDAYTIAFGIRNVPRI 149
Query: 185 DKALSEAYRVLKPGGRFLCLEFSHEE---------------------------------- 210
++AL+EAYRVL+PGGRFLCLEFSH +
Sbjct: 150 ERALAEAYRVLQPGGRFLCLEFSHVDVPGLDRIYDAYSFRIIPHLGALVAGDRESYRYLV 209
Query: 211 -----------FKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
F MIE AGF +VT+ L+ G+ AIHSG+K+
Sbjct: 210 ESIRRFPTPGAFAGMIEEAGFAHVTHRLLSGGICAIHSGWKI 251
>sp|Q5JNC0|COQ5_ORYSJ 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1
Length = 294
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 121/290 (41%), Gaps = 105/290 (36%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF +VA SYD MND MS G+HRLWKD I +L P K LDVAGGT +A RA
Sbjct: 54 VFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVA-----FRAL 108
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPR-----------LRFLEAN 116
++ + M + + Q V I PN +++ R L +++ +
Sbjct: 109 ERINSVSHRAMQGTLTDIEEETQIYVCDIN--PNMLNVGKKRASERGYKEGHCLSWIQGD 166
Query: 117 AEELPIESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
AE L E S YTIAFGIRNVT I
Sbjct: 167 AEALSFEDGSMDGYTIAFGIRNVTHI---------------------------------- 192
Query: 177 GIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH---------------------------- 208
+KALSEAYRVLK GGRFLCLE SH
Sbjct: 193 --------EKALSEAYRVLKRGGRFLCLELSHVDVPLFKEIYDVYSFSVIPAVGELVAGD 244
Query: 209 -----------------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E+F MI+ AGF+ V YENL GVVAIHSG KL
Sbjct: 245 RQSYQYLVESIRRFPNQEKFAQMIQEAGFERVEYENLVGGVVAIHSGLKL 294
>sp|Q2KDB0|UBIE_RHIEC Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ubiE
PE=3 SV=1
Length = 258
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 121/282 (42%), Gaps = 102/282 (36%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR WKD I L P + K+LDVAGGT +A V
Sbjct: 32 QVFHKVAKRYDIMNDVMSMGMHRAWKDAMIAALNPRKEPGYKVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q V+ + G ++ V + R ++ + L F+EANAEELP E+
Sbjct: 91 ASGRQAHATVLDINGSMLG---------VGAERAEKKKL---SGNLTFVEANAEELPFEA 138
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
S+ AYTIAFGIRNV RID
Sbjct: 139 ASFDAYTIAFGIRNVPRID----------------------------------------- 157
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
KALSEAYRVLK GGR L LEFS
Sbjct: 158 -KALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAWSFNAIPQFGKAITGDAEPYQYLV 216
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E F +MI AGF VTY N T G+ A+HSG+KL
Sbjct: 217 ESIRKFPNQENFAAMIRQAGFSRVTYTNYTGGIAALHSGWKL 258
>sp|A9WW74|UBIE_BRUSI Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=ubiE PE=3 SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYCVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|Q8YDE4|UBIE_BRUME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=ubiE PE=3 SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|C0RMK3|UBIE_BRUMB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=ubiE PE=3 SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|Q576Q0|UBIE_BRUAB Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus biovar 1 (strain 9-941) GN=ubiE PE=3
SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|Q2YJM4|UBIE_BRUA2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain 2308) GN=ubiE PE=3 SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|B2SC50|UBIE_BRUA1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Brucella abortus (strain S19) GN=ubiE PE=3 SV=1
Length = 269
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD + L P+ LDVAGGT +A V
Sbjct: 43 DVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 101
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + I N L F+EANAEELP E
Sbjct: 102 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL-IDN--LEFVEANAEELPFED 149
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
+S+ AYTIAFGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 150 NSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWS---- 205
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
R + RI K ++ ++Y L R ++F +MIE AGF+ V+Y N T G+ A
Sbjct: 206 FRAIPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAA 262
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 263 LHSGWKL 269
>sp|A8LNK7|UBIE_DINSH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Dinoroseobacter shibae (strain DFL 12) GN=ubiE PE=3
SV=1
Length = 250
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 121/279 (43%), Gaps = 101/279 (36%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA YD MND MS G+HR+WKD +D L P +LLDVAGGT +A F+ RA
Sbjct: 28 VFTNVASKYDIMNDLMSGGLHRVWKDAMMDWLAPRAAQRLLDVAGGTGDIA-FRFLKRAP 86
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
+ + + LIAG+ + + + + RL +L +A LP +S+
Sbjct: 87 EAEAVVLDLTESMLIAGRQRA-------------EAEALDARLNWLVGDAMALPFADNSF 133
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
YTI+FGIRNVTR IP+ A
Sbjct: 134 DVYTISFGIRNVTR-----IPD-------------------------------------A 151
Query: 188 LSEAYRVLKPGGRFLCLEFS---------------------------------------- 207
L+EAYRVL+PGGR + LEFS
Sbjct: 152 LAEAYRVLRPGGRLMVLEFSQLPNPGLQKAYDLYSFNVIPPMGKVVTNDRDSYQYLVESI 211
Query: 208 -----HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E F SMI +AGF V Y NLTFGV A+HSG+KL
Sbjct: 212 RRFPDQESFASMIRTAGFDQVKYRNLTFGVAALHSGWKL 250
>sp|Q9LVC8|COQ5_ARATH 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1
Length = 288
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 119/290 (41%), Gaps = 105/290 (36%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA SYD MND MS G+HRLWK+ + +L P K LDVAGGT +A R Y
Sbjct: 48 VFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVA-----FRIY 102
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPR-----------LRFLEAN 116
D + ++ + Q V I PN +++ R L ++E +
Sbjct: 103 DAVYSVKRRALQKVDEASLEETQIYVCDIN--PNMLNVGKQRAAERGLRDNKSLVWVEGD 160
Query: 117 AEELPIESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
AE L + +S YTIAFGIRNVT I+
Sbjct: 161 AEALSFDDNSMDGYTIAFGIRNVTHIE--------------------------------- 187
Query: 177 GIRNVTRIDKALSEAYRVLKPGGRFLCLEFSH---------------------------- 208
KAL+EAYRVLK GGRFLCLE SH
Sbjct: 188 ---------KALAEAYRVLKRGGRFLCLELSHVEIPVFKNLYDLYSFQVIPNLGELIAGD 238
Query: 209 -----------------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E F SMI AGF+ V YENL GVVAIHS KL
Sbjct: 239 RESYQYLVESVRRFPPQERFASMIADAGFEKVEYENLVGGVVAIHSAIKL 288
>sp|Q1MME0|UBIE_RHIL3 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=ubiE PE=3 SV=1
Length = 258
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 129/247 (52%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR WKD I L P + K+LDVAGGT +A V
Sbjct: 32 QVFHKVAKRYDIMNDVMSMGMHRAWKDAMISALNPRKEPGYKVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q V+ + G ++ V + R ++ + L F+EANAEELP E+
Sbjct: 91 ASGRQAHATVLDINGSMLG---------VGAERAEKKKL---SGNLTFVEANAEELPFEA 138
Query: 125 DSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
S+ AYTIAFGIRNV RID ++ RL LE + ++P+ Y A++
Sbjct: 139 GSFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAWS---- 194
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
+ + KA++ E Y+ L R + E F +MI AGF VT+ N T G+ A
Sbjct: 195 FNAIPQFGKAITGDAEPYQYLVESIRKFP---NQENFAAMIRQAGFSRVTFTNYTGGIAA 251
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 252 LHSGWKL 258
>sp|B9J7S8|UBIE_AGRRK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
GN=ubiE PE=3 SV=1
Length = 258
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 131/248 (52%), Gaps = 34/248 (13%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
EVF VAK YD MND MS G+HR WKD I L P D K+LDVAGGT +A ++
Sbjct: 32 EVFHKVAKRYDIMNDVMSMGLHRAWKDAMISALNPRKDPSYKVLDVAGGTGDIA--FRIV 89
Query: 65 RAYDQYSF-QVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
A ++ + V+ + G ++ V + R ++ L F+EANAEELP E
Sbjct: 90 EASNRLAHATVLDINGSMLG---------VGAERAAKKKL---TDNLTFVEANAEELPFE 137
Query: 124 SDSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
+S+ AYTIAFGIRNV RID ++ RL LE + +LP+ Y A++
Sbjct: 138 PNSFDAYTIAFGIRNVPRIDVALKEAYRVLKRGGRLLVLEFSEVDLPLLDRVYEAWS--- 194
Query: 177 GIRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVV 233
+ + KA++ E Y+ L R + ++F +MI AGF V + N T G+
Sbjct: 195 -FNAIPQFGKAITGDAEPYQYLVESIRKFP---NQQDFATMIREAGFSRVNFTNYTGGIA 250
Query: 234 AIHSGFKL 241
A+HSG+KL
Sbjct: 251 ALHSGWKL 258
>sp|P49017|COQ5_YEAST 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COQ5 PE=1 SV=1
Length = 307
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 127/286 (44%), Gaps = 98/286 (34%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLG----PTHDTKL--LDVAGGTDPLANL 60
+VF +VA YD MND MS GIHRLWKD FI++L P T L +DVAGG+ +A
Sbjct: 69 DVFSSVANRYDLMNDVMSLGIHRLWKDHFINKLDAGKRPNSTTPLNFIDVAGGSGDIA-- 126
Query: 61 LFVLRAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEEL 120
F L + + F ES +DI NP + E+
Sbjct: 127 -FGLLDHAESKFGD------------------TESTMDI---VDI-NPDML---KEGEKR 160
Query: 121 PIESDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELP-IESDSYSAYTIAFGIR 179
+E Y +PR+RFL +N E+L I+SDS YT++FGIR
Sbjct: 161 AMEQGKY-------------------FKDPRVRFLVSNGEKLEEIDSDSKDIYTVSFGIR 201
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFS-------------------------------- 207
N T I K L+ AYRVLKPGG F CLEFS
Sbjct: 202 NFTDIQKGLNTAYRVLKPGGIFYCLEFSKIENPLMDFAYQQWAKVLPVMGSMIANDYDSY 261
Query: 208 ------------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E FKSMIE AGF+ YE+LTFG+ AIH G K+
Sbjct: 262 QYLVESIERFPDQETFKSMIEKAGFKSAGYESLTFGICAIHWGIKV 307
>sp|B3PZ92|UBIE_RHIE6 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium etli (strain CIAT 652) GN=ubiE PE=3 SV=1
Length = 258
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 130/247 (52%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD I L P + K+LDVAGGT +A V
Sbjct: 32 QVFHKVAKRYDIMNDVMSMGMHRVWKDAMIAALNPRKEPGYKVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q V+ + G ++ V + R ++ + L F+EANAEELP E+
Sbjct: 91 ASGRQAHATVLDINGSMLG---------VGAERAEKKKL---SANLTFVEANAEELPFEA 138
Query: 125 DSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
S+ AYTIAFGIRNV RID ++ RL LE + ++P+ Y A++
Sbjct: 139 ASFDAYTIAFGIRNVPRIDVALAEAYRVLKRGGRLLVLEFSEVDMPLLDKIYDAWS---- 194
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
+ + KA++ E Y+ L R + E F +MI AGF V++ N T G+ A
Sbjct: 195 FNAIPQFGKAITGDAEPYQYLVESIRKFP---NQENFAAMIRQAGFSRVSHTNYTGGIAA 251
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 252 LHSGWKL 258
>sp|B5ZYK8|UBIE_RHILW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
GN=ubiE PE=3 SV=1
Length = 258
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR WKD I L P + ++LDVAGGT +A V
Sbjct: 32 QVFHKVAKRYDIMNDVMSMGMHRAWKDAMISALNPRKEPGYRVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q V+ + G ++ V + R ++ + L F+EANAEELP E
Sbjct: 91 ASGRQAHATVLDINGSMLG---------VGAERAEKKKL---SGNLTFVEANAEELPFEP 138
Query: 125 DSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
S+ AYTIAFGIRNV RID ++ RL LE + ++P+ Y A++
Sbjct: 139 ASFDAYTIAFGIRNVPRIDAALSEAYRVLKRGGRLLVLEFSEVDMPLLDRIYDAWS---- 194
Query: 178 IRNVTRIDKALS---EAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
+ + KA++ E Y+ L R + E F +MI AGF VTY N T G+ A
Sbjct: 195 FNAIPQFGKAITGDAEPYQYLVESIRKFP---NQENFAAMIRQAGFSRVTYTNYTGGIAA 251
Query: 235 IHSGFKL 241
+HSG+KL
Sbjct: 252 LHSGWKL 258
>sp|A9ILA7|UBIE_BART1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=ubiE PE=3 SV=1
Length = 260
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 127/283 (44%), Gaps = 106/283 (37%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP---THDTKLLDVAGGTDPLANLLFVL 64
VF +VA++YD MND +S G+HR+WK+ + L P +H K+LDVAGGT +A +L
Sbjct: 35 VFHSVAENYDKMNDILSLGLHRVWKNSMVAWLSPPALSH-WKVLDVAGGTGDIA--FRIL 91
Query: 65 RAYDQYSF-QVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
+A Q + V+ + G ++ S+ + Q + P + F+EANAE LP E
Sbjct: 92 KASRQKAHATVLDINGSML------------SVGKQRAQKNGLAPLIDFVEANAEHLPFE 139
Query: 124 SDSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTR 183
S+ AYTIAFGIRNV ID
Sbjct: 140 DQSFDAYTIAFGIRNVPHID---------------------------------------- 159
Query: 184 IDKALSEAYRVLKPGGRFLCLEFSHEE--------------------------------- 210
+AL EA+RVLKPGGRFLCLEFS+ E
Sbjct: 160 --QALREAFRVLKPGGRFLCLEFSNVEMPWLDKIYDLWSFHAIPKLGQFIANDGDAYRYL 217
Query: 211 ------------FKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
F MI+ AGF V+Y NLT + A+HSG+K+
Sbjct: 218 VESIRKFPKQNDFAHMIKQAGFSRVSYRNLTGAIAALHSGWKI 260
>sp|A8GPI0|UBIE_RICAH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rickettsia akari (strain Hartford) GN=ubiE PE=3 SV=1
Length = 248
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 126/279 (45%), Gaps = 98/279 (35%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA YD MND MSFG+HRLWKD FI R+ P ++ +LDVA G+ +A L +A
Sbjct: 23 VFSNVADKYDLMNDLMSFGLHRLWKDEFIRRI-PNLNSHILDVASGSGDIA-LKLAKKAR 80
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
D+ + + + + K + + F N L+F A+AEELP +S+
Sbjct: 81 DRGN-NIALTLSDINEEMLKNAKKKTIDLNLFQN--------LKFTVASAEELPYPDNSF 131
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
YTIAFGIRNV P+ I+KA
Sbjct: 132 DYYTIAFGIRNV--------PD----------------------------------INKA 149
Query: 188 LSEAYRVLKPGGRFLCLEF----------------------------------------- 206
L EAYRVLKP G+F+CLEF
Sbjct: 150 LKEAYRVLKPMGKFICLEFSKVKESYFKDFYKFYSFSIIPTIGQVITGNKEAYEYLVESI 209
Query: 207 ----SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S +EF+ MI+ AGF+ V Y+NL+ G+VAIHSG+K+
Sbjct: 210 ELFPSQDEFRIMIKEAGFEEVGYKNLSGGIVAIHSGYKI 248
>sp|A6WYI0|UBIE_OCHA4 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=ubiE PE=3 SV=1
Length = 263
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKL--LDVAGGTDPLANLLFVL 64
+VF VA YD MND MS G+HR+WKD I L P+ LDVAGGT +A V
Sbjct: 37 DVFHKVASKYDVMNDLMSAGMHRVWKDAMIAWLAPSKRPGWTSLDVAGGTGDIA-FRIVE 95
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
+ Q ++ + G ++ V R + L F+EA+AEELP E
Sbjct: 96 ASGRQAHVTILDINGSMLG---------VGRERAIKKGL---ADNLEFVEASAEELPFED 143
Query: 125 DSYSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
S+ AYTI+FGIRNV IDK + P R LE + ELP+ Y ++
Sbjct: 144 ASFDAYTISFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDQWSF-HA 202
Query: 178 IRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHS 237
I + ++ +++Y L R ++F +MIE AGF+ V+Y N T G+ A+HS
Sbjct: 203 IPRIGKMITGDADSYSYLVESIRKFP---KQQDFAAMIEKAGFERVSYRNFTGGIAALHS 259
Query: 238 GFKL 241
G+KL
Sbjct: 260 GWKL 263
>sp|B9JZF4|UBIE_AGRVS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=ubiE PE=3 SV=1
Length = 258
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 117/282 (41%), Gaps = 102/282 (36%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDT--KLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD I L P D K+LDVAGGT +A
Sbjct: 32 DVFHKVAKRYDIMNDVMSAGMHRVWKDALIAALNPRKDAGYKVLDVAGGTGDIA------ 85
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
F++I +L + + Q Q + L F+EANAE LP E+
Sbjct: 86 -------FRIIEASRRLAHATVLDINGSMLGVGQERAQKKGLSDNLTFVEANAEALPFEA 138
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
+ + AYTIAFGIRNV RI
Sbjct: 139 NQFDAYTIAFGIRNVPRI------------------------------------------ 156
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
D ALSEAYRVLK GGR L LEFS
Sbjct: 157 DVALSEAYRVLKRGGRLLVLEFSEVQMPLLDRFYDQWSFKAIPRFGKMITGEAEPYQYLV 216
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
++F +MI AGF V++ N T G+ A+HSG+K+
Sbjct: 217 ESIRKFPNQQDFAAMITKAGFSKVSFTNYTGGIAALHSGWKI 258
>sp|A1UUE1|UBIE_BARBK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=ubiE PE=3 SV=1
Length = 260
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 121/281 (43%), Gaps = 102/281 (36%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP--THDTKLLDVAGGTDPLANLLFVLR 65
VF +VA++YD MND +S G+HR+WK+ I L P K++DVAGGT +A
Sbjct: 35 VFHSVAENYDRMNDILSLGLHRIWKNSMITWLAPPAISGWKVIDVAGGTGDIA------- 87
Query: 66 AYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESD 125
F+++ + + + ++ + QI+ P + F+EANAE+LP
Sbjct: 88 ------FRILNASRKKAHATVLDINHSMLNVGKKRAQINGLAPFIDFVEANAEQLPFSDQ 141
Query: 126 SYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRID 185
S+ AYTIAFGIRNV IDK
Sbjct: 142 SFDAYTIAFGIRNVPHIDK----------------------------------------- 160
Query: 186 KALSEAYRVLKPGGRFLCLEFSH------------------------------------- 208
ALSEA+RVLKPGGRFLCLEFS+
Sbjct: 161 -ALSEAFRVLKPGGRFLCLEFSNVEMPLLDKLYDLWSFHAIPKLGQLIAGNSDAYRYLVE 219
Query: 209 --------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
++F MI AGF V+Y N T + A+HSG+K+
Sbjct: 220 SIRMFPKQDDFACMINRAGFSRVSYRNFTGAIAALHSGWKI 260
>sp|A8GXR2|UBIE_RICB8 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rickettsia bellii (strain OSU 85-389) GN=ubiE PE=3
SV=1
Length = 248
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 125/279 (44%), Gaps = 98/279 (35%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA YD MND MSFG+HRLWKD FI ++ P ++ +LDVA G+ +A L +A
Sbjct: 23 VFSNVADKYDLMNDLMSFGMHRLWKDEFIRQI-PNLNSNILDVASGSGDIA-LKLAKKAK 80
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
D+ S + + + + + + F N L+F A+AEELP +S+
Sbjct: 81 DRGS-NISLTLSDINEEMLRQAKKKSIDLNLFQN--------LKFTVASAEELPFPDNSF 131
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
YTIAFGIRNV P+ I+KA
Sbjct: 132 DYYTIAFGIRNV--------PD----------------------------------INKA 149
Query: 188 LSEAYRVLKPGGRFLCLEF----------------------------------------- 206
L EAYRVLKP G+F+CLEF
Sbjct: 150 LKEAYRVLKPMGKFICLEFSKVKESLLQDFYKFYSFNVIPKIGKIITGNKEAYDYLVESI 209
Query: 207 ----SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S +EF+ MI+ AGF+ + Y+NL+ G+VAIHS +KL
Sbjct: 210 DLFPSQDEFRIMIKEAGFEEINYKNLSGGIVAIHSAYKL 248
>sp|Q1RJY5|UBIE_RICBR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rickettsia bellii (strain RML369-C) GN=ubiE PE=3 SV=1
Length = 248
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 125/279 (44%), Gaps = 98/279 (35%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA YD MND MSFG+HRLWKD FI ++ P ++ +LDVA G+ +A L +A
Sbjct: 23 VFSNVADKYDLMNDLMSFGMHRLWKDEFIRQI-PNLNSNILDVASGSGDIA-LKLAKKAK 80
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
D+ S + + + + + + F N L+F A+AEELP +S+
Sbjct: 81 DRGS-NISLTLSDINEEMLRQAKKKSIDLNLFQN--------LKFTVASAEELPFPDNSF 131
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
YTIAFGIRNV P+ I+KA
Sbjct: 132 DYYTIAFGIRNV--------PD----------------------------------INKA 149
Query: 188 LSEAYRVLKPGGRFLCLEF----------------------------------------- 206
L EAYRVLKP G+F+CLEF
Sbjct: 150 LKEAYRVLKPMGKFICLEFSKVKESLLQDFYKFYSFNVIPKIGQIITGNKEAYDYLVESI 209
Query: 207 ----SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S +EF+ MI+ AGF+ + Y+NL+ G+VAIHS +KL
Sbjct: 210 DLFPSQDEFRIMIKEAGFEEINYKNLSGGIVAIHSAYKL 248
>sp|A6UFF7|UBIE_SINMW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Sinorhizobium medicae (strain WSM419) GN=ubiE PE=3
SV=1
Length = 258
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 128/245 (52%), Gaps = 28/245 (11%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP--THDTKLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD I L P D ++LDVAGGT +A V
Sbjct: 32 DVFHKVAKRYDIMNDVMSAGLHRVWKDAMIAALNPPGREDYRVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIA-GQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
R+ + V+ + G +++ G + + +E+ L F+EANAE+LP
Sbjct: 91 RSGRKAQATVLDINGSMLSVGAERARKKGIEA-------------NLEFVEANAEDLPFA 137
Query: 124 SDSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
++S+ AYTIAFGIRNV RI+ ++ RL LE + E+P+ Y A++
Sbjct: 138 ANSFDAYTIAFGIRNVPRIEVALREAYRVLKRGGRLLVLEFSEVEMPLLDRFYDAWSFN- 196
Query: 177 GIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIH 236
I ++ Y+ L R + +F +MI AGF V++ N T G+ A+H
Sbjct: 197 AIPKFGKLITGDDAPYQYLVESIRKFP---NQRDFAAMIRDAGFARVSFTNYTGGIAALH 253
Query: 237 SGFKL 241
SG+K+
Sbjct: 254 SGWKI 258
>sp|Q92SK7|UBIE_RHIME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium meliloti (strain 1021) GN=ubiE PE=3 SV=2
Length = 258
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 128/245 (52%), Gaps = 28/245 (11%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP--THDTKLLDVAGGTDPLANLLFVL 64
+VF VAK YD MND MS G+HR+WKD I L P D ++LDVAGGT +A V
Sbjct: 32 DVFHKVAKRYDIMNDVMSAGLHRVWKDAMIAALNPPGREDYRVLDVAGGTGDIA-FRIVE 90
Query: 65 RAYDQYSFQVIPVMGQLIA-GQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIE 123
R+ + V+ + G +++ G + + +E+ L F+EANAE+LP
Sbjct: 91 RSGRKAHATVLDINGSMLSVGAERARKKGIEA-------------NLDFVEANAEDLPFA 137
Query: 124 SDSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAF 176
++S+ AYTIAFGIRNV RI+ ++ RL LE + E+P+ Y A++
Sbjct: 138 ANSFDAYTIAFGIRNVPRIEVALKEAYRVLKRGGRLLVLEFSEVEMPLLDRFYDAWSFN- 196
Query: 177 GIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIH 236
I ++ Y+ L R + +F +MI AGF V++ N T G+ A+H
Sbjct: 197 AIPKFGKLITGDDAPYQYLVESIRKFP---NQRDFAAMIRDAGFARVSFTNYTGGIAALH 253
Query: 237 SGFKL 241
SG+K+
Sbjct: 254 SGWKI 258
>sp|Q6G577|UBIE_BARHE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=ubiE PE=3 SV=1
Length = 260
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 122/282 (43%), Gaps = 104/282 (36%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGP--THDTKLLDVAGGTDPLANLLFVLR 65
VF +VA++YD MND +S G+HR+WK+ + L P K+LDVAGGT +A +L
Sbjct: 35 VFHSVAENYDKMNDILSLGLHRMWKNSMVAWLSPPAVFHWKVLDVAGGTGDIA--FRILN 92
Query: 66 AYDQYSF-QVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
A Q + V+ + G +++ V R N + P + F+EANAE LP E
Sbjct: 93 ASRQKAHATVLDINGSMLS---------VGKKRAEKNGL---APLIDFVEANAEHLPFED 140
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
S+ AYTIAFGIRNV ID
Sbjct: 141 QSFDAYTIAFGIRNVPHID----------------------------------------- 159
Query: 185 DKALSEAYRVLKPGGRFLCLEFSH------------------------------------ 208
+AL EA+RVLKPGGRFLCLEFS+
Sbjct: 160 -QALREAFRVLKPGGRFLCLEFSNVEMPLLDKIYDLWSFHAIPKLGQLIANDGDAYRYLV 218
Query: 209 ---------EEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
++F MI GF V+Y NLT + A+HS +K+
Sbjct: 219 ESIRKFPKQDDFAHMINHVGFSRVSYRNLTGAIAALHSAWKI 260
>sp|A4VGE5|UBIE_PSEU5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas stutzeri (strain A1501) GN=ubiE PE=3 SV=1
Length = 256
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 123/241 (51%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
EVF +VA YD MND MS GIHRLWK I+ G H ++LD+AGGT L
Sbjct: 32 EVFHSVAAKYDLMNDLMSGGIHRLWKRFTIELSGARHGNRILDIAGGTGDLTR------- 84
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
Q+S V P G+++ V + + +RF++A+AE+LP +
Sbjct: 85 --QFSRIVGPT-GEVVLADINASMLKVGRDKLLDKGV---AGNVRFVQADAEKLPFPDNY 138
Query: 127 YSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT + ++ P RL LE + + S +Y AY+ + +
Sbjct: 139 FDVVTIAFGLRNVTHKEDAIASMLRVLKPGGRLLVLEFSKPTNQLFSKAYDAYSFSL-LP 197
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
+ ++ SE+YR L R + E K M+E+AGF+ V+Y N+T G+VA+H G
Sbjct: 198 MMGKLITNDSESYRYLAESIR---MHPDQETLKGMMEAAGFERVSYHNMTGGIVALHRGI 254
Query: 240 K 240
K
Sbjct: 255 K 255
>sp|Q4UMW4|UBIE_RICFE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=ubiE PE=3 SV=1
Length = 248
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 124/279 (44%), Gaps = 98/279 (35%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF NVA YD MND MSFG+HRLWKD F R P ++ +LDVA G+ +A L +A
Sbjct: 23 VFSNVADKYDLMNDLMSFGLHRLWKDEF-SRQIPNLNSHILDVASGSGDIA-LKLAKKAR 80
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
D+ + + + + K + + F N L+F A+AEELP +S+
Sbjct: 81 DRGN-NIALTLSDINEEMLKNAKKKAIDLNLFQN--------LKFTVASAEELPFSDNSF 131
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
YTIAFGIRNV P+ I+KA
Sbjct: 132 DYYTIAFGIRNV--------PD----------------------------------INKA 149
Query: 188 LSEAYRVLKPGGRFLCLEF----------------------------------------- 206
L EAYRVLKP G+F+CLEF
Sbjct: 150 LKEAYRVLKPMGKFICLEFSKVKESYFKDFYKFYSFSIIPTIGQAITGNKEAYEYLVESI 209
Query: 207 ----SHEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
S +EF+ M++ AGF+ V+Y+NL+ G+VAIHS +K+
Sbjct: 210 ELFPSQDEFRIMLKEAGFEEVSYKNLSGGIVAIHSAYKI 248
>sp|Q98GV1|UBIE_RHILO Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhizobium loti (strain MAFF303099) GN=ubiE PE=3 SV=1
Length = 258
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 123/245 (50%), Gaps = 28/245 (11%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTH--DTKLLDVAGGTDPLANLLFVL 64
+VF VA YD MND MS G+HRLWKD + L P K+LDVAGGT +A V
Sbjct: 32 DVFHKVANRYDLMNDLMSAGLHRLWKDAMVTWLNPPKRPGWKVLDVAGGTGDIA-FRIVD 90
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
++ V+ + G ++ + + Q + F+EANAEELP
Sbjct: 91 ASHGNAHATVLDINGSMLG------------VGRDRAQKKGLSGNTDFVEANAEELPFAD 138
Query: 125 DSYSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFG 177
++ AYTIAFGIRNV RID ++ P R LE + E+P+ +Y A++
Sbjct: 139 ATFDAYTIAFGIRNVPRIDVALSEAFRVLKPGGRFLCLEFSEVEMPLLDKAYEAWSFN-A 197
Query: 178 IRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEE-FKSMIESAGFQYVTYENLTFGVVAIH 236
I + ++ E Y L +F +++ F +MI AGF V++ N + G+ A+H
Sbjct: 198 IPKIGKMVTGDGEPYSYLVES----IAKFPNQQNFAAMISRAGFDRVSFRNYSGGIAALH 253
Query: 237 SGFKL 241
SG+KL
Sbjct: 254 SGWKL 258
>sp|P34666|COQ5_CAEEL 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Caenorhabditis elegans GN=coq-5 PE=3 SV=2
Length = 285
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 127/246 (51%), Gaps = 30/246 (12%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
++ VF NVAK YD MNDAMS G+HRLWKD ++ L ++ K LD+AGGT +A +L
Sbjct: 57 VHHVFANVAKKYDLMNDAMSMGVHRLWKDYYVGGLQVPYNAKCLDMAGGTGDIA--FRIL 114
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
R P ++ +P L ++ + DI R ++ ANAE++P ES
Sbjct: 115 RHS--------PTAKVTVSDINQP--MLDVGKKRAEKERDIQPSRAEWVCANAEQMPFES 164
Query: 125 DSYSAYTIAFGIRNVTRIDKI-----DIPNPR-----LRFLEANAEELPIESDSYSAYTI 174
++Y +T++FGIRN T +K+ + P L F E N+ PI D+YS I
Sbjct: 165 NTYDLFTMSFGIRNCTHPEKVVREAFRVLKPGGQLAILEFSEVNSALKPI-YDAYSFNVI 223
Query: 175 AFGIRNVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVA 234
+ + D+A +Y+ L R + +EF +I GF V YENLTFGV +
Sbjct: 224 PV-LGEILASDRA---SYQYLVESIRKFP---NQDEFARIIREEGFSNVRYENLTFGVCS 276
Query: 235 IHSGFK 240
IH G K
Sbjct: 277 IHKGMK 282
>sp|B0T7D0|UBIE_CAUSK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Caulobacter sp. (strain K31) GN=ubiE PE=3 SV=1
Length = 252
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 112/279 (40%), Gaps = 96/279 (34%)
Query: 8 VFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRAY 67
VF+ VAK+YD MND MS G+HRLWKD RL P ++D AGGT +A
Sbjct: 25 VFDRVAKNYDLMNDVMSGGVHRLWKDAVAARLNPQPGEIIIDCAGGTGDMA--------- 75
Query: 68 DQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDSY 127
+ + R + P+ + ++ NAE + +
Sbjct: 76 ----------------------RRFAKMTRAAQERRGGPDALINIIDYNAEMIGAGIEKG 113
Query: 128 SAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRIDKA 187
A P + + +A+ LP+ AY I+FGIRNVT ID A
Sbjct: 114 GA--------------------PEITWTVGDAQRLPLPDAYADAYVISFGIRNVTDIDAA 153
Query: 188 LSEAYRVLKPGGRFLCLEFS---------------------------------------- 207
L EA RVLKPGGRFLCLEFS
Sbjct: 154 LREARRVLKPGGRFLCLEFSKPVTEALSKAYDAYSFKLIPQFGEWLAKDRDAYQYLVESI 213
Query: 208 -----HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
+ F M+E+AGF+ VT N T GV A+H G+ L
Sbjct: 214 RRFPDQKTFAGMMENAGFKRVTITNFTGGVAAMHQGWAL 252
>sp|Q88D17|UBIE_PSEPK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas putida (strain KT2440) GN=ubiE PE=3 SV=1
Length = 256
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
EVF +VA YD MND +S G+HRLWK I+ G ++LD+AGGT LA
Sbjct: 32 EVFHSVAAKYDLMNDVLSGGMHRLWKRFTIELSGVRSGNRVLDIAGGTGDLAA------- 84
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
++S V P GQ++ V R + + F++A+AE+LP +
Sbjct: 85 --KFSRLVGPT-GQVVLADINDSMLKVGRDRLLDRGV---AGNIEFVQADAEKLPFPDNH 138
Query: 127 YSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT D ++ P RL LE + + S +Y AY+ AF +
Sbjct: 139 FDCVTIAFGLRNVTHKDAAIRSMLRVLKPGGRLLILEFSKPTNKLMSKAYDAYSFAF-MP 197
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
++ +E+YR L R + E KSM+ AGF VTY N+T G+VA+H G
Sbjct: 198 LAGKLITNDAESYRYLAESIR---MHPDQETLKSMMVEAGFDRVTYHNMTSGIVAVHRGI 254
Query: 240 K 240
K
Sbjct: 255 K 255
>sp|A5WA45|UBIE_PSEP1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiE
PE=3 SV=1
Length = 256
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
EVF +VA YD MND +S G+HRLWK I+ G ++LD+AGGT LA
Sbjct: 32 EVFHSVAAKYDLMNDVLSGGMHRLWKRFTIELSGVRSGNRVLDIAGGTGDLAA------- 84
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
++S V P GQ++ V R + + F++A+AE+LP +
Sbjct: 85 --KFSRLVGPT-GQVVLADINDSMLKVGRDRLLDRGV---AGNIEFVQADAEKLPFPDNH 138
Query: 127 YSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT D ++ P RL LE + + S +Y AY+ AF +
Sbjct: 139 FDCVTIAFGLRNVTHKDAAIRSMLRVLKPGGRLLILEFSKPTNKLMSKAYDAYSFAF-MP 197
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
++ +E+YR L R + E KSM+ AGF VTY N+T G+VA+H G
Sbjct: 198 LAGKLITNDAESYRYLAESIR---MHPDQETLKSMMVEAGFDRVTYHNMTSGIVAVHRGI 254
Query: 240 K 240
K
Sbjct: 255 K 255
>sp|A4WVR7|UBIE_RHOS5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=ubiE PE=3 SV=1
Length = 250
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 116/282 (41%), Gaps = 101/282 (35%)
Query: 5 MYEVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVL 64
++ VF VA YD MND MS GIHRLWKD +D L P KLLDVAGGT ++ F+
Sbjct: 25 VHGVFTRVASKYDIMNDLMSGGIHRLWKDAMMDWLAPRPGQKLLDVAGGTGDIS-FRFLK 83
Query: 65 RAYDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIES 124
RA ++ L+ G RQ + + + RL ++ +A LP S
Sbjct: 84 RAPGAHATVCDMTESMLVEG------------RQRADAAQMAD-RLDWVVGDAMALPFAS 130
Query: 125 DSYSAYTIAFGIRNVTRIDKIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIRNVTRI 184
+++ YTI+FGIRNVTR +
Sbjct: 131 NTFDVYTISFGIRNVTR------------------------------------------V 148
Query: 185 DKALSEAYRVLKPGGRFLCLEFS------------------------------------- 207
AL+EA+RVLKPGGR + LEFS
Sbjct: 149 QDALNEAFRVLKPGGRLMVLEFSQLPNPAMQWAYDRYSFNVIPVMGQIVANDRDSYQYLV 208
Query: 208 --------HEEFKSMIESAGFQYVTYENLTFGVVAIHSGFKL 241
E F MI AGF V Y NL+ G+ A+HSG+K+
Sbjct: 209 ESIRKFPDQETFAGMIRKAGFGLVKYRNLSMGIAALHSGWKI 250
>sp|Q3IJV7|UBIE_PSEHT Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=ubiE PE=3 SV=1
Length = 251
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
+VF +VA YD MND MSFG+HRLWK I G +LD+AGGT L
Sbjct: 27 DVFHSVAAKYDVMNDLMSFGVHRLWKRQTIASSGVRKGHHVLDLAGGTGDLTA------- 79
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
++S Q++ GQ+I G +++ R+ + + + + +++ NAE LP +S
Sbjct: 80 --KFS-QLVGETGQVILGDIN--SSMLKVGREKLHNLGLVG-NIDYVQMNAEALPFPDNS 133
Query: 127 YSAYTIAFGIRNVTRIDK-------IDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT DK I P RL LE + E I S +Y Y+ +
Sbjct: 134 FDLITIAFGLRNVTDKDKALRSMYRILKPGGRLLVLEFSKPEHEILSKAYDFYSFNL-LP 192
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
+ ++ SE+Y+ L R + + KSM+ AGF+ TY+NLT G+VA+H GF
Sbjct: 193 TMGKLVANDSESYKYLAESIR---MHPDQDTLKSMMSDAGFEQTTYQNLTGGIVALHRGF 249
Query: 240 K 240
K
Sbjct: 250 K 250
>sp|B1J2S8|UBIE_PSEPW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas putida (strain W619) GN=ubiE PE=3 SV=1
Length = 256
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
EVF +VA YD MND +S G+HRLWK I+ G ++LD+AGGT LA
Sbjct: 32 EVFHSVAAKYDLMNDVLSGGMHRLWKRFTIELSGVRSGNRVLDIAGGTGDLAA------- 84
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
++S V P GQ++ V R + + F++A+AE+LP +
Sbjct: 85 --KFSRLVGPT-GQVVLADINDSMLKVGRDRLLDRGV---AGNIEFVQADAEKLPFPDNH 138
Query: 127 YSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT D ++ P RL LE + + S +Y AY+ AF +
Sbjct: 139 FDCVTIAFGLRNVTHKDEAIRSMLRVLKPGGRLLILEFSKPTNKLMSKAYDAYSFAF-MP 197
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
++ SE+YR L R + E K+M+ AGF VTY N+T G+VA+H G
Sbjct: 198 LAGKLITNDSESYRYLAESIR---MHPDQETLKAMMVDAGFDRVTYHNMTSGIVAVHRGI 254
Query: 240 K 240
K
Sbjct: 255 K 255
>sp|Q1I3T0|UBIE_PSEE4 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas entomophila (strain L48) GN=ubiE PE=3
SV=1
Length = 256
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 7 EVFENVAKSYDTMNDAMSFGIHRLWKDIFIDRLGPTHDTKLLDVAGGTDPLANLLFVLRA 66
EVF +VA YD MND +S G+HRLWK I+ G ++LD+AGGT LA
Sbjct: 32 EVFHSVAAKYDLMNDVLSGGMHRLWKRFTIELSGVRSGNRVLDIAGGTGDLAA------- 84
Query: 67 YDQYSFQVIPVMGQLIAGQWKPYQYLVESIRQFPNQIDIPNPRLRFLEANAEELPIESDS 126
++S V P GQ++ V R + + F++A+AE+LP +
Sbjct: 85 --KFSRLVGPT-GQVVLADINESMLKVGRDRLLDRGV---AGNIEFVQADAEKLPFPDNH 138
Query: 127 YSAYTIAFGIRNVTRID-------KIDIPNPRLRFLEANAEELPIESDSYSAYTIAFGIR 179
+ TIAFG+RNVT D ++ P RL LE + + S +Y AY+ AF +
Sbjct: 139 FDCVTIAFGLRNVTHKDEAIRSMLRVLKPGGRLLVLEFSKPTNKLMSKAYDAYSFAF-MP 197
Query: 180 NVTRIDKALSEAYRVLKPGGRFLCLEFSHEEFKSMIESAGFQYVTYENLTFGVVAIHSGF 239
++ SE+YR L R + E K+M+ AGF VTY N+T G+VA+H G
Sbjct: 198 LAGKLITNDSESYRYLAESIR---MHPDQETLKAMMVEAGFDRVTYHNMTSGIVAVHRGI 254
Query: 240 K 240
K
Sbjct: 255 K 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,569,922
Number of Sequences: 539616
Number of extensions: 3629927
Number of successful extensions: 11686
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 9581
Number of HSP's gapped (non-prelim): 1455
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)