Query psy14202
Match_columns 356
No_of_seqs 233 out of 2938
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 22:05:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14202.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14202hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-51 3.9E-56 380.4 31.8 332 20-355 11-396 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-47 4.9E-52 353.0 31.7 313 20-336 44-402 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 3.1E-45 1.1E-49 317.8 29.5 274 22-340 4-282 (285)
4 4g8k_A 2-5A-dependent ribonucl 100.0 1.6E-45 5.5E-50 327.9 27.3 261 93-355 24-320 (337)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1.2E-43 4.3E-48 315.7 27.9 283 23-340 25-330 (337)
6 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-42 4.5E-47 301.2 29.5 245 93-355 4-272 (285)
7 3utm_A Tankyrase-1; tankyrase, 100.0 5.5E-43 1.9E-47 312.8 25.4 271 20-336 21-334 (351)
8 3d9h_A CDNA FLJ77766, highly s 100.0 6E-43 2E-47 303.7 23.3 268 21-338 13-281 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 8.6E-43 2.9E-47 314.2 17.2 280 26-337 69-372 (373)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 2.1E-41 7.3E-46 289.0 23.2 215 104-336 33-248 (253)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 8.6E-42 2.9E-46 291.5 20.0 218 119-355 2-242 (253)
12 2f8y_A Notch homolog 1, transl 100.0 3.2E-41 1.1E-45 282.3 22.8 218 105-340 2-220 (223)
13 3aji_A 26S proteasome non-ATPa 100.0 3E-41 1E-45 284.0 22.0 224 95-337 7-231 (231)
14 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-40 4.5E-45 297.4 25.9 244 93-355 23-328 (351)
15 4b93_B Ankyrin repeat domain-c 100.0 1.2E-41 4E-46 292.5 17.6 230 92-338 9-246 (269)
16 1k1a_A B-cell lymphoma 3-encod 100.0 5E-41 1.7E-45 284.4 21.1 226 91-335 6-240 (241)
17 3b7b_A Euchromatic histone-lys 100.0 3.5E-40 1.2E-44 278.6 25.6 224 90-332 7-231 (237)
18 2xai_A ASB-9, ankyrin repeat a 100.0 2.4E-40 8.1E-45 283.8 24.0 222 94-338 3-224 (261)
19 3d9h_A CDNA FLJ77766, highly s 100.0 3.6E-40 1.2E-44 286.2 24.7 242 93-355 14-272 (285)
20 3b7b_A Euchromatic histone-lys 100.0 7E-40 2.4E-44 276.8 24.2 210 125-351 7-225 (237)
21 3kea_A K1L; tropism, ANK repea 100.0 3.5E-41 1.2E-45 292.6 16.5 231 102-355 7-240 (285)
22 1k1a_A B-cell lymphoma 3-encod 100.0 4.8E-40 1.6E-44 278.4 23.0 211 128-355 8-235 (241)
23 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-41 4.6E-46 306.4 13.7 298 24-355 38-365 (373)
24 3ljn_A Hypothetical protein; a 100.0 7.7E-42 2.6E-46 307.3 11.6 259 19-336 16-314 (364)
25 3ljn_A Hypothetical protein; a 100.0 2.8E-40 9.6E-45 297.1 21.2 227 90-337 16-270 (364)
26 3eu9_A Huntingtin-interacting 100.0 3.4E-39 1.2E-43 272.7 26.1 228 92-338 7-237 (240)
27 2xai_A ASB-9, ankyrin repeat a 100.0 3.2E-39 1.1E-43 276.8 22.5 192 128-338 2-193 (261)
28 1oy3_D Transcription factor in 100.0 4.6E-39 1.6E-43 278.8 23.2 243 90-338 5-252 (282)
29 3aji_A 26S proteasome non-ATPa 100.0 3.9E-39 1.3E-43 271.1 21.8 210 129-355 6-224 (231)
30 1oy3_D Transcription factor in 100.0 5.8E-39 2E-43 278.1 21.8 216 89-323 40-270 (282)
31 2dzn_A Probable 26S proteasome 100.0 1.2E-38 4.1E-43 267.6 21.5 217 96-333 4-227 (228)
32 4b93_B Ankyrin repeat domain-c 100.0 3.9E-39 1.3E-43 276.8 17.0 210 128-354 10-237 (269)
33 2rfa_A Transient receptor pote 100.0 6.7E-38 2.3E-42 263.8 22.0 195 128-339 2-225 (232)
34 2dzn_A Probable 26S proteasome 100.0 8.9E-38 3E-42 262.2 22.1 193 129-338 2-202 (228)
35 3kea_A K1L; tropism, ANK repea 100.0 3.5E-39 1.2E-43 279.9 13.3 221 91-340 28-250 (285)
36 2f8y_A Notch homolog 1, transl 100.0 6.5E-38 2.2E-42 262.2 18.7 199 140-355 2-210 (223)
37 3eu9_A Huntingtin-interacting 100.0 2.5E-37 8.5E-42 261.3 21.9 211 128-355 8-229 (240)
38 1s70_B 130 kDa myosin-binding 100.0 6.6E-38 2.3E-42 273.9 18.1 194 128-338 39-259 (299)
39 3hra_A Ankyrin repeat family p 100.0 1.7E-36 5.7E-41 249.5 23.9 190 128-334 4-201 (201)
40 4gpm_A Engineered protein OR26 100.0 1E-36 3.5E-41 242.7 21.0 159 164-339 6-164 (169)
41 1s70_B 130 kDa myosin-binding 100.0 1.3E-37 4.4E-42 272.1 17.2 222 93-334 39-287 (299)
42 1ikn_D Protein (I-kappa-B-alph 100.0 6.3E-38 2.2E-42 264.7 12.2 194 128-338 7-211 (236)
43 2etb_A Transient receptor pote 100.0 4.6E-37 1.6E-41 262.6 15.4 193 129-338 2-248 (256)
44 4gpm_A Engineered protein OR26 100.0 1.3E-35 4.6E-40 236.2 21.6 159 131-306 6-164 (169)
45 2pnn_A Transient receptor pote 100.0 2.5E-36 8.4E-41 260.6 15.6 194 128-338 12-261 (273)
46 1sw6_A Regulatory protein SWI6 100.0 1.9E-36 6.3E-41 267.9 11.6 195 101-322 104-327 (327)
47 2rfa_A Transient receptor pote 100.0 1.2E-34 4.1E-39 243.8 20.5 206 94-305 3-224 (232)
48 3hra_A Ankyrin repeat family p 100.0 7.4E-34 2.5E-38 233.6 23.2 187 94-297 5-199 (201)
49 1ikn_D Protein (I-kappa-B-alph 100.0 3.8E-36 1.3E-40 253.7 9.2 213 91-322 5-230 (236)
50 3jxi_A Vanilloid receptor-rela 100.0 5.2E-35 1.8E-39 250.4 15.5 194 128-338 4-252 (260)
51 1sw6_A Regulatory protein SWI6 100.0 2E-35 7E-40 261.2 9.6 209 105-338 58-310 (327)
52 4hbd_A KN motif and ankyrin re 100.0 5.4E-34 1.9E-38 246.0 14.8 193 131-334 78-273 (276)
53 2rfm_A Putative ankyrin repeat 100.0 3.7E-33 1.2E-37 227.8 17.7 162 156-334 29-190 (192)
54 3v30_A DNA-binding protein rfx 100.0 5E-33 1.7E-37 222.9 17.3 169 129-314 2-171 (172)
55 2etb_A Transient receptor pote 100.0 1.5E-33 5.1E-38 240.8 14.9 199 95-297 3-242 (256)
56 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.7E-33 3E-37 219.2 16.8 157 162-336 5-162 (162)
57 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.5E-32 1.2E-36 217.3 19.4 153 130-297 15-167 (169)
58 2pnn_A Transient receptor pote 100.0 2E-33 6.8E-38 242.3 12.8 221 91-314 10-270 (273)
59 3v31_A Ankyrin repeat family A 100.0 2.4E-32 8.3E-37 217.8 18.0 159 161-336 2-160 (167)
60 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.8E-31 6.2E-36 213.2 21.5 159 159-334 11-169 (169)
61 3v31_A Ankyrin repeat family A 100.0 1.7E-31 5.9E-36 212.9 19.6 155 128-297 2-156 (167)
62 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-31 4.3E-36 212.5 18.6 157 129-303 5-162 (162)
63 2rfm_A Putative ankyrin repeat 100.0 1.1E-31 3.9E-36 219.0 18.6 155 128-297 34-188 (192)
64 3jxi_A Vanilloid receptor-rela 100.0 2.8E-32 9.6E-37 233.4 15.5 193 95-304 6-251 (260)
65 2vge_A RELA-associated inhibit 100.0 3.5E-35 1.2E-39 246.2 -3.3 202 110-331 1-208 (229)
66 3v30_A DNA-binding protein rfx 100.0 9.8E-32 3.4E-36 215.4 16.1 161 162-339 2-163 (172)
67 3f6q_A Integrin-linked protein 100.0 1.3E-31 4.6E-36 216.0 15.4 163 161-340 4-167 (179)
68 1awc_B Protein (GA binding pro 100.0 9.1E-31 3.1E-35 205.6 19.5 149 131-295 4-152 (153)
69 1awc_B Protein (GA binding pro 100.0 7.1E-31 2.4E-35 206.2 18.2 151 162-330 2-152 (153)
70 4hbd_A KN motif and ankyrin re 100.0 9.9E-32 3.4E-36 231.9 14.1 183 99-298 81-272 (276)
71 3twr_A Tankyrase-2; ankyrin re 100.0 2.4E-31 8.2E-36 211.6 14.2 159 159-335 5-164 (165)
72 3f6q_A Integrin-linked protein 100.0 8.7E-31 3E-35 211.2 16.9 166 129-311 5-171 (179)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.4E-30 8.1E-35 203.8 17.5 149 131-296 4-153 (156)
74 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1E-29 3.6E-34 200.1 18.8 153 162-333 2-155 (156)
75 3twr_A Tankyrase-2; ankyrin re 100.0 6.2E-30 2.1E-34 203.4 16.4 154 128-297 7-161 (165)
76 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.6E-30 9E-35 218.3 10.2 162 160-339 3-167 (239)
77 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.5E-31 2.9E-35 221.3 6.9 189 128-336 4-204 (239)
78 2vge_A RELA-associated inhibit 100.0 2E-31 6.7E-36 223.4 0.5 190 145-354 1-206 (229)
79 2aja_A Ankyrin repeat family p 100.0 4.2E-32 1.4E-36 242.6 -6.3 236 92-354 90-367 (376)
80 1d9s_A Cyclin-dependent kinase 100.0 1.5E-28 5.2E-33 188.8 12.3 134 185-336 2-136 (136)
81 1d9s_A Cyclin-dependent kinase 100.0 5E-28 1.7E-32 185.9 13.1 130 152-297 2-132 (136)
82 1bi7_B P16INK4A, MTS1, multipl 100.0 3E-28 1E-32 191.8 12.1 144 157-318 7-151 (156)
83 1bi7_B P16INK4A, MTS1, multipl 100.0 6.9E-28 2.4E-32 189.7 11.9 141 128-283 11-151 (156)
84 2aja_A Ankyrin repeat family p 99.9 2.9E-31 1E-35 237.1 -8.5 221 97-355 68-338 (376)
85 3t8k_A Uncharacterized protein 99.9 2.1E-28 7.3E-33 197.8 8.8 156 131-297 8-175 (186)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-26 4.1E-31 175.5 16.6 125 210-336 2-126 (126)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 2.4E-26 8.2E-31 176.5 16.2 122 211-334 15-136 (136)
88 3t8k_A Uncharacterized protein 99.9 1.4E-27 4.8E-32 193.0 9.5 156 162-335 6-178 (186)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9E-26 3.1E-30 170.6 16.2 121 162-297 2-122 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 172.5 15.6 121 162-297 14-134 (136)
91 3deo_A Signal recognition part 99.9 2.5E-27 8.4E-32 191.7 3.8 139 160-333 42-181 (183)
92 3c5r_A BARD-1, BRCA1-associate 99.9 3.8E-26 1.3E-30 175.6 8.8 135 185-337 1-135 (137)
93 3c5r_A BARD-1, BRCA1-associate 99.9 4.9E-26 1.7E-30 175.0 9.1 130 152-297 1-130 (137)
94 3ui2_A Signal recognition part 99.9 2.7E-25 9.1E-30 188.0 11.1 140 161-335 44-184 (244)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-24 5.3E-29 188.7 13.0 141 161-324 150-299 (301)
96 3deo_A Signal recognition part 99.9 3.9E-24 1.3E-28 172.8 13.8 137 128-297 43-180 (183)
97 3aaa_C Myotrophin, protein V-1 99.9 2.3E-24 7.8E-29 162.4 10.9 108 161-283 6-113 (123)
98 3ui2_A Signal recognition part 99.9 4.1E-24 1.4E-28 180.7 13.6 137 128-297 44-181 (244)
99 3aaa_C Myotrophin, protein V-1 99.9 2.5E-24 8.6E-29 162.2 10.4 111 210-322 7-117 (123)
100 2b0o_E UPLC1; arfgap, structur 99.9 3E-24 1E-28 186.9 12.4 142 193-349 149-299 (301)
101 1dcq_A PYK2-associated protein 99.9 1.7E-23 5.6E-28 180.2 16.4 130 212-343 132-270 (278)
102 3ehr_A Osteoclast-stimulating 99.9 2.1E-24 7.2E-29 179.9 9.6 123 160-297 71-194 (222)
103 3ehr_A Osteoclast-stimulating 99.9 1E-23 3.4E-28 175.8 10.7 134 128-276 72-206 (222)
104 3lvq_E ARF-GAP with SH3 domain 99.9 7.6E-23 2.6E-27 190.6 15.5 130 212-343 134-272 (497)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-22 3.8E-27 145.0 12.5 93 242-336 1-93 (93)
106 3jue_A Arfgap with coiled-coil 99.9 6.4E-23 2.2E-27 182.5 13.7 165 159-338 196-366 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.9 2.9E-22 9.9E-27 186.7 16.5 128 130-272 133-269 (497)
108 3jue_A Arfgap with coiled-coil 99.9 8E-22 2.7E-26 175.5 15.1 144 128-286 198-347 (368)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.1E-21 7.2E-26 138.4 12.7 91 162-267 2-92 (93)
110 1dcq_A PYK2-associated protein 99.9 4.3E-21 1.5E-25 165.1 15.6 77 221-297 183-259 (278)
111 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-21 4.7E-26 145.2 8.4 107 158-279 5-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 6.7E-21 2.3E-25 141.5 8.7 97 240-338 6-102 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 9.9E-19 3.4E-23 128.5 10.0 91 238-330 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 4.3E-18 1.5E-22 125.1 10.8 86 210-295 24-109 (110)
115 1gp8_A Protein (scaffolding pr 41.0 23 0.0008 19.1 2.4 17 166-182 17-33 (40)
116 4g26_A Pentatricopeptide repea 39.8 65 0.0022 29.3 6.9 37 143-181 91-127 (501)
117 4g26_A Pentatricopeptide repea 26.0 1.7E+02 0.0058 26.5 7.2 76 108-189 91-174 (501)
118 3zrh_A Ubiquitin thioesterase 25.0 3.2E+02 0.011 24.1 8.0 22 210-231 69-90 (454)
119 3zrh_A Ubiquitin thioesterase 24.9 2.3E+02 0.0079 24.9 7.2 63 101-184 29-91 (454)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-51 Score=380.41 Aligned_cols=332 Identities=24% Similarity=0.274 Sum_probs=263.6
Q ss_pred cCCCCcccccccccChHHHHHHHhhcCCCCC---------HHHHHHhHHH-HHHHHHhcCCccccccccccchhHhhhh-
Q psy14202 20 DEGESNKFLCDLRAGHAGIAFRLSRLQAPLD---------ADKSLELGHH-ILKAHVYKNMTLVKYSSRDLQAHWISSV- 88 (356)
Q Consensus 20 ~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~---------~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 88 (356)
++.|.||||+|++.|+.++|++|++.+.+++ ...+...|+. +++.++..+.++.........++.....
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI 90 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 4456666666666666666666666654433 1235555555 5666665555443222222222222111
Q ss_pred -----------------cCChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhC
Q psy14202 89 -----------------CQSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEF 151 (356)
Q Consensus 89 -----------------~~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~ 151 (356)
..+....++++.|+..|+.+++++|++.+.+++..+. .+.||||+|+..|+.+++++|+++
T Consensus 91 g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 91 GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK--KGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT--TSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC--CCCCHHHHHHHcCCHHHHHHHHhC
Confidence 1123345667778888888888888888887776554 567888999999999999999998
Q ss_pred CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC------------------CChH
Q psy14202 152 HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ------------------NLSP 213 (356)
Q Consensus 152 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~------------------~~~~ 213 (356)
|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+ |.||
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 248 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 248 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 8888888888899999999999999999999988888888888899999998876543 7799
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHH
Q psy14202 214 LMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVT 293 (356)
Q Consensus 214 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~ 293 (356)
|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 249 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 328 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK 328 (437)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 294 YLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 294 ~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
+|++ .+++++.+|..|.|||++|+..|+.+++++|+++|++++ +..+|...|+.+++++|
T Consensus 329 ~Ll~--~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l 396 (437)
T 1n11_A 329 FLLQ--HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396 (437)
T ss_dssp HHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHh--cCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 9998 899999999999999999999999999999999999986 67789999999888876
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-47 Score=353.00 Aligned_cols=313 Identities=26% Similarity=0.318 Sum_probs=275.5
Q ss_pred cCCCCcccccccccChHHHHHHHhhcCCCCCH---------HHHHHhHHH-HHHHHHhcCCccccccccccchhHhhhhc
Q psy14202 20 DEGESNKFLCDLRAGHAGIAFRLSRLQAPLDA---------DKSLELGHH-ILKAHVYKNMTLVKYSSRDLQAHWISSVC 89 (356)
Q Consensus 20 ~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~---------~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (356)
+..+.||||+|++.|+.+++++|++++++++. ..+...|+. +++.++..+.++.........++......
T Consensus 44 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 123 (437)
T 1n11_A 44 NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE 123 (437)
T ss_dssp SSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 45678999999999999999999988776532 346777776 88888887766543333333333332211
Q ss_pred ------------------CChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhC
Q psy14202 90 ------------------QSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEF 151 (356)
Q Consensus 90 ------------------~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~ 151 (356)
.+....+.++.|+..|+.+++++|++.|++++..+. .+.|||++|+..|+.+++++|+++
T Consensus 124 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ 201 (437)
T 1n11_A 124 GHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK--NGLTPLHVAVHHNNLDIVKLLLPR 201 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS--SCCCHHHHHHHTTCHHHHHHHGGG
T ss_pred CCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHhC
Confidence 123455678899999999999999999999987765 678999999999999999999999
Q ss_pred CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC------------------CChH
Q psy14202 152 HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ------------------NLSP 213 (356)
Q Consensus 152 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~------------------~~~~ 213 (356)
|.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+ |.||
T Consensus 202 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~ 281 (437)
T 1n11_A 202 GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTP 281 (437)
T ss_dssp TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999987654 7899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHH
Q psy14202 214 LMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVT 293 (356)
Q Consensus 214 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~ 293 (356)
|+.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 282 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 282 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 294 YLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 294 ~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+|++ .|++++.+|.+|.||+++|++.|+.+++++|.....+
T Consensus 362 ~Ll~--~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~~ 402 (437)
T 1n11_A 362 LLLK--NGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE 402 (437)
T ss_dssp HHHH--TTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCC
T ss_pred HHHH--CcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcccc
Confidence 9999 8999999999999999999999999999999876543
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-45 Score=317.84 Aligned_cols=274 Identities=21% Similarity=0.226 Sum_probs=241.2
Q ss_pred CCCcccccccccChHHHHHHHhhcCCCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCChhhhhhhhhh
Q psy14202 22 GESNKFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCSLRN 101 (356)
Q Consensus 22 ~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 101 (356)
.|.|||++|++.|+.+++++|++.+..++.. .+....+.++.|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------------------------------~~~~g~t~L~~A 46 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-------------------------------------EEEGGWTPLHNA 46 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC-------------------------------------CTTTCCCHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccc-------------------------------------cCCCCCcHHHHH
Confidence 3579999999999999999999987654310 012234567789
Q ss_pred hcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHH
Q psy14202 102 VYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTL 181 (356)
Q Consensus 102 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L 181 (356)
+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus 47 ~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 124 (285)
T 1wdy_A 47 VQMSREDIVELLLRHGADPVLRKK--NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999987765 678999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCc----H
Q psy14202 182 VAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQH-HAPLDQTDGSHKTPLMIAAQEGH----V 256 (356)
Q Consensus 182 l~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~----~ 256 (356)
+++|++++..+..... .......+.|||+.|+..|+.+++++|++. |.+++.++..|.||||+|+..++ .
T Consensus 125 l~~g~~~~~~~~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 199 (285)
T 1wdy_A 125 YKRGANVNLRRKTKED-----QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 199 (285)
T ss_dssp HHTTCCTTCCCCCCHH-----HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHH
T ss_pred HHhCCCcccccccHHH-----HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHH
Confidence 9999999877322110 011122234588999999999999999997 99999999999999999999999 9
Q ss_pred HHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 257 GLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 257 ~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+++++|+++|++++.++..|.||||+|+..|+.+++++|++. .+++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ-EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS-SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999985 7999999999999999999999999999999999999
Q ss_pred CChh
Q psy14202 337 LGPT 340 (356)
Q Consensus 337 ~~~~ 340 (356)
++..
T Consensus 279 ~~~~ 282 (285)
T 1wdy_A 279 TDCG 282 (285)
T ss_dssp SCCS
T ss_pred CCcc
Confidence 9854
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.6e-45 Score=327.88 Aligned_cols=261 Identities=24% Similarity=0.294 Sum_probs=241.4
Q ss_pred hhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHC
Q psy14202 93 AQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGR 172 (356)
Q Consensus 93 ~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 172 (356)
...+.++.|+..|++++|++|+++|+++|..+.. .|.||||+|+..|+.++|++|+++|++++..+..+.+|++.++..
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~-~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE-GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCC-CCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 4567789999999999999999999999987653 577899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC----------------------------CChHHHHHHHcCCHH
Q psy14202 173 GHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ----------------------------NLSPLMLAVKEGHWA 224 (356)
Q Consensus 173 g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~----------------------------~~~~l~~a~~~~~~~ 224 (356)
+...++..+++.+++++.++..|.||+++|+..++.+ |.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 9999999999999999999999999999999877543 679999999999999
Q ss_pred HHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcC
Q psy14202 225 TAEKLLQ-HHAPLDQTDGSHKTPLMIAAQEGH----VGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRD 299 (356)
Q Consensus 225 ~~~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 299 (356)
++++|++ .|+++|.++..|.|+++.++..+. ..++++|+++|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~- 261 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ- 261 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS-
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh-
Confidence 9999996 599999999999999998876543 4688999999999999999999999999999999999999985
Q ss_pred CCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC---hhHHHHhhCCcceeccC
Q psy14202 300 RGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG---PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 300 ~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~---~~~~a~~~~~~~~~~~l 355 (356)
.+++++.+|.+|.||||+|++.|+.+++++|+++||++| +..+|+..|+.+||++|
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHH
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 689999999999999999999999999999999999997 66799999999999986
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.2e-43 Score=315.66 Aligned_cols=283 Identities=24% Similarity=0.286 Sum_probs=206.8
Q ss_pred CCcccccccccChHHHHHHHhhcCCCCCH----------HHHHHhHHH-HHHHHHhcCCccccccccccchhHhhhhcCC
Q psy14202 23 ESNKFLCDLRAGHAGIAFRLSRLQAPLDA----------DKSLELGHH-ILKAHVYKNMTLVKYSSRDLQAHWISSVCQS 91 (356)
Q Consensus 23 ~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~----------~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (356)
|.|+|+.|++.|+.++|++|+++|++++. ..+...|+. +++.++..+..+.. .+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~---------------~~ 89 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL---------------RK 89 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------------CC
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhh---------------hc
Confidence 57899999999999999999999886541 113334433 44444444333211 12
Q ss_pred hhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCcc----------CCC
Q psy14202 92 PAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLA----------NSQ 161 (356)
Q Consensus 92 ~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~----------~~~ 161 (356)
......+..+...+..+++..++..+.+++..+. .+.||+++|+..|+.+++++|+++|++++.. +..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~ 167 (337)
T 4g8k_A 90 KNGATPFILAAIAGSVKLLKLFLSKGADVNECDF--YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 167 (337)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT--TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTC
T ss_pred cCCCchhHHHHhcccchhhHHhhhccchhhhhcc--CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCC
Confidence 2233344445555555555555555555555443 4566777777777777777777777765543 234
Q ss_pred CCcHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVA-AGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
|.||||+|+..|+.++|++|++ .|++++.++..|.|+++.++..+.. .+...++++|+++|+++|.++
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~-----------~~~~~i~~lLl~~gad~n~~d 236 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD-----------SDVEAITHLLLDHGADVNVRG 236 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT-----------TTHHHHHHHHHHTTCCTTCCC
T ss_pred CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc-----------ccHHHHHHHHHHCCCCCCCcC
Confidence 6677777777777777777774 4677777777777765544332221 112468899999999999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHH
Q psy14202 241 GSHKTPLMIAAQEGHVGLLELLLDK-GADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAI 319 (356)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~ 319 (356)
..|.||||+|+..|+.+++++|++. |++++.+|.+|.||||+|++.|+.++|++|++ .|++++.. +||++|+
T Consensus 237 ~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~--~GAd~n~~-----~~L~~A~ 309 (337)
T 4g8k_A 237 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK--RGASTDCG-----DLVMTAR 309 (337)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT--TSCSSTTC-----CHHHHHH
T ss_pred CCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCC-----CHHHHHH
Confidence 9999999999999999999999986 89999999999999999999999999999999 89888754 5999999
Q ss_pred hCCCHHHHHHHHHcCCCCChh
Q psy14202 320 SCRNVPVVQCFLRKGAKLGPT 340 (356)
Q Consensus 320 ~~~~~~i~~~Ll~~ga~~~~~ 340 (356)
+.++.+++++|+++||++|..
T Consensus 310 ~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 310 RNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HTTCHHHHHHHHHTTCCC---
T ss_pred HcCCHHHHHHHHHCcCCCCCC
Confidence 999999999999999999843
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-42 Score=301.24 Aligned_cols=245 Identities=26% Similarity=0.317 Sum_probs=230.0
Q ss_pred hhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHC
Q psy14202 93 AQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGR 172 (356)
Q Consensus 93 ~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 172 (356)
...+.++.|+..|+++++++|++.|++++..... .+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE-GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 4566788999999999999999999999877432 677999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC----------CCC
Q psy14202 173 GHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQT----------DGS 242 (356)
Q Consensus 173 g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~ 242 (356)
|+.+++++|+++|++++.++..|.| ||+.|+..|+.+++++|+++|++++.. +..
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~ 147 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFT---------------AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCB---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCCCCccCcccCC---------------HHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccC
Confidence 9999999999999999999999887 777888889999999999999999987 778
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHcCC----HHHHHHhhhcCCCCCcccCCCCCCcHHHH
Q psy14202 243 HKTPLMIAAQEGHVGLLELLLDK-GADILREDGEGLTALSWACMRGR----IQAVTYLLDRDRGAMIEHVDINGLRPLDR 317 (356)
Q Consensus 243 g~t~l~~a~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~ 317 (356)
|.||||.|+..|+.+++++|+++ |++++..+..|.||||+|+..++ .+++++|++ .|++++.+|..|.||||+
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~--~g~~~~~~~~~g~t~L~~ 225 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD--HGADVNVRGERGKTPLIL 225 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH--TTCCSSCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH--cCCCCCCcCCCCCcHHHH
Confidence 99999999999999999999998 99999999999999999999999 999999999 899999999999999999
Q ss_pred HHhCCCHHHHHHHHH-cCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 318 AISCRNVPVVQCFLR-KGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 318 A~~~~~~~i~~~Ll~-~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
|+..|+.+++++|++ .|++++ +..+|+..|+.+++++|
T Consensus 226 A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~L 272 (285)
T 1wdy_A 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272 (285)
T ss_dssp HHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Confidence 999999999999999 899886 67899999999999986
No 7
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.5e-43 Score=312.79 Aligned_cols=271 Identities=24% Similarity=0.285 Sum_probs=222.8
Q ss_pred cCCCCcccccccccChHHHHHHHhhcC-CCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCChhhhhhh
Q psy14202 20 DEGESNKFLCDLRAGHAGIAFRLSRLQ-APLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCS 98 (356)
Q Consensus 20 ~~~~~~~l~~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (356)
++.+.++|+.|++.|+.++++.|+... ..++ ..+....+++
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~--------------------------------------~~d~~g~t~L 62 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCH--------------------------------------ASDGRKSTPL 62 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCC--------------------------------------CSSTTCCCHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcc--------------------------------------cCCCCCCCHH
Confidence 345679999999999999999998742 2111 1122345678
Q ss_pred hhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHH
Q psy14202 99 LRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAV 178 (356)
Q Consensus 99 ~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv 178 (356)
+.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 63 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 140 (351)
T 3utm_A 63 HLAAGYNRVRIVQLLLQHGADVHAKDK--GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVC 140 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCC--CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 889999999999999999999998776 688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHHc---------------------------------------CCCCCChHHHHHHH
Q psy14202 179 RTLVAAGASLGRTDTTGRCALVHAARG---------------------------------------GHLQNLSPLMLAVK 219 (356)
Q Consensus 179 ~~Ll~~g~~~~~~~~~~~t~l~~a~~~---------------------------------------~~~~~~~~l~~a~~ 219 (356)
++|+++|++++..+..|.+|++.++.. ....+.|||+.|+.
T Consensus 141 ~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~ 220 (351)
T 3utm_A 141 SLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVA 220 (351)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHH
Confidence 999999999999999999999887532 12336678888888
Q ss_pred c---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhh
Q psy14202 220 E---GHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLL 296 (356)
Q Consensus 220 ~---~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 296 (356)
. +..+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 221 ~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll 300 (351)
T 3utm_A 221 SLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL 300 (351)
T ss_dssp CCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 7 4477888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 297 DRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 297 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+ .|++++..|..|.||+++| ..+++++|.+.+..
T Consensus 301 ~--~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 301 S--YGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp H--TTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred H--cCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 7 7788888888888888776 56777777777643
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-43 Score=303.75 Aligned_cols=268 Identities=20% Similarity=0.200 Sum_probs=207.8
Q ss_pred CCCCcccccccccChHHHHHHHhhcCCCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCChhhhhhhhh
Q psy14202 21 EGESNKFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCSLR 100 (356)
Q Consensus 21 ~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (356)
..|.|++|+|++.|+.+.+..++..+.. ..+....... .....+....+.++.
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~--------------------~~~~~~l~~~-------~~~~~~~~g~t~L~~ 65 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPR--------------------DFPGIRLLSN-------PLMGDAVSDWSPMHE 65 (285)
T ss_dssp -------------------------------------------------CCSEECCCC-------TTCSSSCCSCCHHHH
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccc--------------------cccchhhhhC-------cccCCCccCCCHHHH
Confidence 3578999999999998777666654321 0000000000 012244566778899
Q ss_pred hhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHH
Q psy14202 101 NVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRT 180 (356)
Q Consensus 101 a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~ 180 (356)
|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++
T Consensus 66 Aa~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (285)
T 3d9h_A 66 AAIHGHQLSLRNLISQGWAVNIITA--DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL 143 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCEECT--TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHH
Confidence 9999999999999999999997766 68899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q psy14202 181 LVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLE 260 (356)
Q Consensus 181 Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~ 260 (356)
|+++|++++..+. |.| ||++|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 144 Ll~~g~~~~~~~~-g~t---------------~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~ 207 (285)
T 3d9h_A 144 LLQHGASVQPESD-LAS---------------PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVK 207 (285)
T ss_dssp HHHTTCCSSCSCT-TSC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHCCCCCCCCCC-CCC---------------HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999876543 555 788889999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHc-CCCCC
Q psy14202 261 LLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRK-GAKLG 338 (356)
Q Consensus 261 ~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~-ga~~~ 338 (356)
+|+++|++++. +..|.||||+|+..|+.+++++|++ .|++++.+|..|+|||++|+ ++.+++++|+++ |+++.
T Consensus 208 ~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~--~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 208 KLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMD--FGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp HHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred HHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 99999999995 8899999999999999999999999 89999999999999999998 567999999999 77764
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.6e-43 Score=314.21 Aligned_cols=280 Identities=19% Similarity=0.186 Sum_probs=217.0
Q ss_pred ccccccccChHHHHHHHhhcCCCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCC-hhhhhhhhhhhcC
Q psy14202 26 KFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQS-PAQALCSLRNVYS 104 (356)
Q Consensus 26 ~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~ 104 (356)
++.-+...|+++++++++.... ...|.+.++....++..+..+... . .....+ ....+.++.|+..
T Consensus 69 ~~~~~~~~g~~~~~~~~~~~~~-------~~~g~t~L~~Aa~~~~~~~~~L~~---~---~~n~~d~~~g~t~Lh~Aa~~ 135 (373)
T 2fo1_E 69 YGNGNDFLGDFNHTNLQIPTEP-------EPESPIKLHTEAAGSYAITEPITR---E---SVNIIDPRHNRTVLHWIASN 135 (373)
T ss_dssp --------------------------------CCCHHHHHHHSSSCCCSCCST---T---TTTTCCCSSCCCHHHHHHCT
T ss_pred cCCCCCccccccccccccccCC-------CCCCccHHHHHhcCCchHHHHhcc---c---cccccCCcCCCCHHHHHHHC
Confidence 3445667778887777665432 123444444444444433332211 0 111122 4566788889999
Q ss_pred CCHHHHHHHH--------HCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHH
Q psy14202 105 PNVKVSRLLL--------LSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHME 176 (356)
Q Consensus 105 ~~~~~~~~ll--------~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 176 (356)
|+.+++++|+ +.|+++|..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 136 g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~--~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 213 (373)
T 2fo1_E 136 SSAEKSEDLIVHEAKECIAAGADVNAMDC--DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 213 (373)
T ss_dssp TCCSCCTTHHHHHHHHHHHTCCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCcCCCC--CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHH
Confidence 9988877766 89999998876 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC---CCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcC---CHHHHHHHHhcCCCCCC--------CCCC
Q psy14202 177 AVRTLVAAG---ASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEG---HWATAEKLLQHHAPLDQ--------TDGS 242 (356)
Q Consensus 177 iv~~Ll~~g---~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~---~~~~~~~Ll~~g~~~~~--------~~~~ 242 (356)
++++|+++| ++++..+..|.| ||++|+..+ +.+++++|+++|++++. ++..
T Consensus 214 ~v~~Ll~~~~~~~~~~~~d~~g~t---------------~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~ 278 (373)
T 2fo1_E 214 MMVYMLNSTKLKGDIEELDRNGMT---------------ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYK 278 (373)
T ss_dssp HHHHHTTSHHHHHTTSCCCTTSCC---------------HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCC
T ss_pred HHHHHHhcCccccChhhcCCCCCC---------------HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccccc
Confidence 999999988 899999999988 566666666 78999999999999886 5678
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhC
Q psy14202 243 HKTPLMIAAQEGHVGLLELLLDKG-ADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321 (356)
Q Consensus 243 g~t~l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~ 321 (356)
|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..
T Consensus 279 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~--~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 279 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ--QGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCCSSCCCSSSCCHHHHHHHT
T ss_pred CCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccCCCCCCCCHHHHHHHc
Confidence 999999999999999999999886 9999999999999999999999999999999 8999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCC
Q psy14202 322 RNVPVVQCFLRKGAKL 337 (356)
Q Consensus 322 ~~~~i~~~Ll~~ga~~ 337 (356)
|+.+++++|+++|++.
T Consensus 357 g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 357 NHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCHHHHHHHHTTC---
T ss_pred CCHHHHHHHHhcCccc
Confidence 9999999999999864
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.1e-41 Score=289.00 Aligned_cols=215 Identities=25% Similarity=0.241 Sum_probs=182.2
Q ss_pred CCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHH
Q psy14202 104 SPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVA 183 (356)
Q Consensus 104 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 183 (356)
.++.+++++|++.|++++.... ..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTD-RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -------------------CCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCChHHHHHHHHccCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3489999999999999875533 367899999999999999999999999999999999999999999999999999999
Q ss_pred cCC-CCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q psy14202 184 AGA-SLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELL 262 (356)
Q Consensus 184 ~g~-~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~L 262 (356)
+|. +++.++..|.| ||++|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 112 ~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 176 (253)
T 1yyh_A 112 NRATDLDARMHDGTT---------------PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176 (253)
T ss_dssp STTSCTTCCCTTCCC---------------HHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHH
T ss_pred cCCCCccccCCCCCc---------------HHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 986 88999888887 67777888889999999999999999999999999999999999999999
Q ss_pred HHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 263 LDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 263 l~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|++.|+.+|+++|.+....
T Consensus 177 l~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLD--HFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH--cCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999987543
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.6e-42 Score=291.46 Aligned_cols=218 Identities=25% Similarity=0.299 Sum_probs=173.6
Q ss_pred CccccccccCCchHHHHHHHcC-------------CHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHHHc
Q psy14202 119 DANHITEFLGAAPALCLFAHEG-------------NSEMIALLLEFHACIDL-ANSQGRTPLSLAAGRGHMEAVRTLVAA 184 (356)
Q Consensus 119 ~~~~~~~~~~~~~~l~~A~~~g-------------~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 184 (356)
++|..+. .|.||||+|+..| +.+++++|++.|.+++. .+..|.||||+|+..|+.++|++|+++
T Consensus 2 dvn~~d~--~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 2 DVNVRGP--DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA 79 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCC--CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 3455554 6889999999987 89999999999999865 489999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy14202 185 GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHA-PLDQTDGSHKTPLMIAAQEGHVGLLELLL 263 (356)
Q Consensus 185 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 263 (356)
|++++.++..|.| ||++|+..|+.+++++|+++|. +++.++..|.||||+|+..|+.+++++|+
T Consensus 80 g~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (253)
T 1yyh_A 80 SADANIQDNMGRT---------------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 144 (253)
T ss_dssp TCCTTCCCTTSCC---------------HHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH
T ss_pred CCCCCCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 9999999999887 7778888899999999999987 89999999999999999999999999999
Q ss_pred HCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC-----
Q psy14202 264 DKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG----- 338 (356)
Q Consensus 264 ~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~----- 338 (356)
++|++++.++..|.||||+|+..|+.+++++|++ .|++++..|..|.|||++|+..|+.+++++|+++|++++
T Consensus 145 ~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK--NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222 (253)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccC
Confidence 9999999999999999999999999999999999 899999999999999999999999999999999999985
Q ss_pred ---hhHHHHhhCCcceeccC
Q psy14202 339 ---PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 339 ---~~~~a~~~~~~~~~~~l 355 (356)
+..+|+..|+.||+++|
T Consensus 223 g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 223 DRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp CCCHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHH
Confidence 77899999999999986
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.2e-41 Score=282.31 Aligned_cols=218 Identities=25% Similarity=0.244 Sum_probs=202.4
Q ss_pred CCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHc
Q psy14202 105 PNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAA 184 (356)
Q Consensus 105 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 184 (356)
|+++++++|++.|++++.... ..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTD-RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccC-CCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 567889999999999886633 2678999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy14202 185 GA-SLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLL 263 (356)
Q Consensus 185 g~-~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 263 (356)
+. +++.++..|.| ||+.|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 81 ~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (223)
T 2f8y_A 81 RATDLDARMHDGTT---------------PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 145 (223)
T ss_dssp TTSCTTCCCTTCCC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCCCcccCCCCCCc---------------HHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 86 88888888887 778888889999999999999999999999999999999999999999999
Q ss_pred HCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCChh
Q psy14202 264 DKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLGPT 340 (356)
Q Consensus 264 ~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~ 340 (356)
++|++++.++..|.||||+|+..|+.+++++|++ .+++++.+|..|.||+++|++.++.+++++|+++|+...+.
T Consensus 146 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLLD--HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred HcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH--cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 9999999999999999999999999999999999 89999999999999999999999999999999999987643
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3e-41 Score=284.05 Aligned_cols=224 Identities=24% Similarity=0.310 Sum_probs=209.2
Q ss_pred hhhhhhhhcCCCHHHHHHHHHCCCCc-cccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCC
Q psy14202 95 ALCSLRNVYSPNVKVSRLLLLSGADA-NHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRG 173 (356)
Q Consensus 95 ~~~~~~a~~~~~~~~~~~ll~~g~~~-~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g 173 (356)
.+.++.|+..|+++.++++++.+... +..+ ..+.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTD--QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCC--CCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence 34578899999999999999887553 3333 36789999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy14202 174 HMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQE 253 (356)
Q Consensus 174 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 253 (356)
+.+++++|+++|++++.++..|.| ||+.|+..++.+++++|+++|++++.++..|.||||+|+..
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCT---------------PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 999999999999999999998887 77788888999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHc
Q psy14202 254 GHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRK 333 (356)
Q Consensus 254 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 333 (356)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+..++.+++++|.++
T Consensus 150 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~ 227 (231)
T 3aji_A 150 GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVT--QGASIYIENKEEKTPLQVAKGGLGLILKRLAEGE 227 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred CCCC
Q psy14202 334 GAKL 337 (356)
Q Consensus 334 ga~~ 337 (356)
|+++
T Consensus 228 ~a~i 231 (231)
T 3aji_A 228 EASM 231 (231)
T ss_dssp HHCC
T ss_pred cccC
Confidence 9864
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-40 Score=297.40 Aligned_cols=244 Identities=24% Similarity=0.245 Sum_probs=212.5
Q ss_pred hhhhhhhhhhcCCCHHHHHHHHHC-CCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHH
Q psy14202 93 AQALCSLRNVYSPNVKVSRLLLLS-GADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAG 171 (356)
Q Consensus 93 ~~~~~~~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 171 (356)
...+.++.|+..|+.+.++.++.. +.+++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDG--RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSST--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Confidence 455678899999999999988875 777776665 68899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC------------
Q psy14202 172 RGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQT------------ 239 (356)
Q Consensus 172 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~------------ 239 (356)
.|+.+++++|+++|++++.++..|.| ||++|+..|+.+++++|+++|++++..
T Consensus 101 ~g~~~iv~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~ 165 (351)
T 3utm_A 101 YGHYEVTELLLKHGACVNAMDLWQFT---------------PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCS
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHh
Confidence 99999999999999999999999988 566666667777777777777766544
Q ss_pred ------------------------------------------CCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCccCCC
Q psy14202 240 ------------------------------------------DGSHKTPLMIAAQE---GHVGLLELLLDKGADILREDG 274 (356)
Q Consensus 240 ------------------------------------------~~~g~t~l~~a~~~---~~~~~v~~Ll~~g~~~~~~~~ 274 (356)
+..|.||||+|+.. +..+++++|+++|++++.++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~ 245 (351)
T 3utm_A 166 TPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK 245 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT
T ss_pred hhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC
Confidence 35678999999998 668999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCChhH----HHHhhCCcc
Q psy14202 275 EGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLGPTT----WSMAAGKPE 350 (356)
Q Consensus 275 ~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~----~a~~~~~~~ 350 (356)
.|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++|++++... .+...++.+
T Consensus 246 ~g~t~L~~A~~~g~~~~v~~Ll~--~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 246 DFMTPLHVAAERAHNDVMEVLHK--HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEA 323 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhHH
Confidence 99999999999999999999999 899999999999999999999999999999999999997332 233344555
Q ss_pred eeccC
Q psy14202 351 VMENF 355 (356)
Q Consensus 351 ~~~~l 355 (356)
++++|
T Consensus 324 ~~~~l 328 (351)
T 3utm_A 324 VQQIL 328 (351)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=292.53 Aligned_cols=230 Identities=25% Similarity=0.312 Sum_probs=178.0
Q ss_pred hhhhhhhhhhhcCCCHHHHHHHHHCCCCcccc------ccccCCchHHHHHHHcCCH-HHHHHHHhCCCCCCccCCCCCc
Q psy14202 92 PAQALCSLRNVYSPNVKVSRLLLLSGADANHI------TEFLGAAPALCLFAHEGNS-EMIALLLEFHACIDLANSQGRT 164 (356)
Q Consensus 92 ~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~------~~~~~~~~~l~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~g~t 164 (356)
......++.|+..|+.+++++|++.|.+.... .....+.+||+.|+..+.. .++++|++.|+++|.+|.+|+|
T Consensus 9 ~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T 88 (269)
T 4b93_B 9 YREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS 88 (269)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCC
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC
Confidence 34566789999999999999999998764221 1222567889999988876 4889999999999999999999
Q ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q psy14202 165 PLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHK 244 (356)
Q Consensus 165 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 244 (356)
|||+|+..|+.++|++|++.|++++.++..|.| |++.|+..++.+++++|+++|+++|.+|..|.
T Consensus 89 pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t---------------~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~ 153 (269)
T 4b93_B 89 PLHVAALHGRADLIPLLLKHGANAGARNADQAV---------------PLHLACQQGHFQVVKCLLDSNAKPNKKDLSGN 153 (269)
T ss_dssp HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCC---------------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCC
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCC---------------ccccccccChHHHHHHHHHCCCCCCCCCCCCC
Confidence 999999999999999999999999999999887 77788888999999999999999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCC-
Q psy14202 245 TPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRN- 323 (356)
Q Consensus 245 t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~- 323 (356)
||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++|++|++ .|++++.+|..|+|||++|+++++
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~--~Gad~~~~d~~G~TpL~~A~~~~~i 231 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLL--HGASVQVLNKRQRTAVDCAEQNSKI 231 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH--TTCCSCCCCTTSCCSGGGSCTTCHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHHHHHHhCCcH
Confidence 99999999999999999999999999999999999999999999999999999 899999999999999999988776
Q ss_pred HHHHHHHHHcCCCCC
Q psy14202 324 VPVVQCFLRKGAKLG 338 (356)
Q Consensus 324 ~~i~~~Ll~~ga~~~ 338 (356)
.+++++|...++.++
T Consensus 232 ~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 232 MELLQVVPSCVASLD 246 (269)
T ss_dssp HHHTTC---------
T ss_pred HHHHHHHHHhchhhh
Confidence 466677777776554
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5e-41 Score=284.42 Aligned_cols=226 Identities=23% Similarity=0.237 Sum_probs=196.4
Q ss_pred ChhhhhhhhhhhcCCCHHHHHHHHH----CCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHH
Q psy14202 91 SPAQALCSLRNVYSPNVKVSRLLLL----SGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPL 166 (356)
Q Consensus 91 ~~~~~~~~~~a~~~~~~~~~~~ll~----~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 166 (356)
+....+.++.|+..|+.+++++|++ .|.+++..+. .+.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN--LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccc--cCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 4456677888999999999999886 7888887765 577889999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC-C
Q psy14202 167 SLAAGRGHMEAVRTLVAAGA----SLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD-G 241 (356)
Q Consensus 167 ~~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~ 241 (356)
|+|+..|+.+++++|++.+. +++..+..|.| ||+.|+..++.+++++|+++|++++..+ .
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 148 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT---------------ALHVAVNTECQETVQLLLERGADIDAVDIK 148 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCc---------------HHHHHHHcCCHHHHHHHHHcCCCccccccc
Confidence 99999999999999999887 77788877776 6777788888999999999999999888 7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhC
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~ 321 (356)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+..
T Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 149 SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR--SGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCTTTTCSSH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCCcCCCCCCHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred CCHHHHHHHHHcCC
Q psy14202 322 RNVPVVQCFLRKGA 335 (356)
Q Consensus 322 ~~~~i~~~Ll~~ga 335 (356)
++.++++.|.++++
T Consensus 227 ~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 227 RVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHTC------
T ss_pred CcHHHHhhhccCCC
Confidence 99999999998876
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.5e-40 Score=278.61 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=203.1
Q ss_pred CChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHH
Q psy14202 90 QSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLA 169 (356)
Q Consensus 90 ~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 169 (356)
.+....+.++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|++.|++++..+..|.||||+|
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE--DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC--CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Confidence 345567788889999999999999999999987765 577899999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy14202 170 AGRGHMEAVRTLVAAG-ASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLM 248 (356)
Q Consensus 170 ~~~g~~~iv~~Ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~ 248 (356)
+..|+.+++++|++.| .+++..+..|.| ||+.|+..++.+++++|+++|++++.++..|.||||
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWT---------------PMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLH 149 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCC---------------HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 9999999999999998 888888888887 677788888899999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy14202 249 IAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQ 328 (356)
Q Consensus 249 ~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~ 328 (356)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+.+.
T Consensus 150 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~gad~~~~d~~g~t~l~~A~~~~~~~~~~ 227 (237)
T 3b7b_A 150 WAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS--RDSDVTLKNKEGETPLQCASLNSQVWSAL 227 (237)
T ss_dssp HHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT--TTCCTTCCCTTSCCHHHHSCTTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH--cCCCCCccCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 89999999999999999999999886555
Q ss_pred HHHH
Q psy14202 329 CFLR 332 (356)
Q Consensus 329 ~Ll~ 332 (356)
.|++
T Consensus 228 ~l~~ 231 (237)
T 3b7b_A 228 QMSK 231 (237)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 18
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=283.84 Aligned_cols=222 Identities=22% Similarity=0.240 Sum_probs=205.1
Q ss_pred hhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCC
Q psy14202 94 QALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRG 173 (356)
Q Consensus 94 ~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g 173 (356)
..+.++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITA--DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 45678889999999999999999999998776 6889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy14202 174 HMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQE 253 (356)
Q Consensus 174 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 253 (356)
+.+++++|+++|++++..+ .|.| ||+.|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~-~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPES-DLAS---------------PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACEN 144 (261)
T ss_dssp CHHHHHHHHHTTCCSSCSC-TTCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCCCC-CCCC---------------HHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHh
Confidence 9999999999999987543 3554 88888999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHc
Q psy14202 254 GHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRK 333 (356)
Q Consensus 254 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 333 (356)
|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++ .|++++.+|..|+||+++|+..+ +++++|+++
T Consensus 145 ~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~--~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~ 219 (261)
T 2xai_A 145 QQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMD--FGADTQAKNAEGKRPVELVPPES--PLAQLFLER 219 (261)
T ss_dssp TCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCChhhhccccc--cHHHHHHhc
Confidence 999999999999999995 7899999999999999999999999 89999999999999999999654 599999999
Q ss_pred CCCCC
Q psy14202 334 GAKLG 338 (356)
Q Consensus 334 ga~~~ 338 (356)
++...
T Consensus 220 ~~~~~ 224 (261)
T 2xai_A 220 EGPPS 224 (261)
T ss_dssp -CCCC
T ss_pred cCCcc
Confidence 88764
No 19
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=286.21 Aligned_cols=242 Identities=20% Similarity=0.229 Sum_probs=193.8
Q ss_pred hhhhhhhhhhcCCCHHHHHHHHHCCCC---------ccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCC
Q psy14202 93 AQALCSLRNVYSPNVKVSRLLLLSGAD---------ANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGR 163 (356)
Q Consensus 93 ~~~~~~~~a~~~~~~~~~~~ll~~g~~---------~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~ 163 (356)
...+.++.|+..|+.+.+..++..+.. -........+.||||+|+..|+.+++++|++.|++++..+..|.
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~ 93 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV 93 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCC
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 345567788888997777766554321 01112334678999999999999999999999999999999999
Q ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q psy14202 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSH 243 (356)
Q Consensus 164 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g 243 (356)
||||+|+..|+.++|++|+++|++++.++..|.| ||++|+..|+.+++++|+++|++++..+ .|
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g 157 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQVNGVTADWHT---------------PLFNACVSGSWDCVNLLLQHGASVQPES-DL 157 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCC---------------HHHHHHHHTCHHHHHHHHHTTCCSSCSC-TT
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC---------------HHHHHHHcCHHHHHHHHHHCCCCCCCCC-CC
Confidence 9999999999999999999999999999999987 7788888899999999999999998654 59
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCC
Q psy14202 244 KTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRN 323 (356)
Q Consensus 244 ~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~ 323 (356)
.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .+++++. +..|.|||++|+..++
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~-~~~g~t~L~~A~~~~~ 234 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE--SGADVNQ-GKGQDSPLHAVVRTAS 234 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH--TTCCTTC-CBTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH--CCCCCCC-CCCCCCHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999 8999985 8899999999999999
Q ss_pred HHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 324 VPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 324 ~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
.+++++|+++|++++ +..+|+ ++.+++++|
T Consensus 235 ~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~L 272 (285)
T 3d9h_A 235 EELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLF 272 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHH
Confidence 999999999999986 334444 566777654
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7e-40 Score=276.78 Aligned_cols=210 Identities=30% Similarity=0.421 Sum_probs=197.7
Q ss_pred cccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q psy14202 125 EFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAAR 204 (356)
Q Consensus 125 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~ 204 (356)
+...+.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------- 79 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGST------- 79 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCC-------
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCc-------
Confidence 3347889999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy14202 205 GGHLQNLSPLMLAVKEGHWATAEKLLQHH-APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWA 283 (356)
Q Consensus 205 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 283 (356)
||+.|+..|+.+++++|+++| .+++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 80 --------~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 80 --------CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWA 151 (237)
T ss_dssp --------HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred --------HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 777888889999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcce
Q psy14202 284 CMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEV 351 (356)
Q Consensus 284 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~ 351 (356)
+..|+.+++++|++ .+++++..|..|.|||++|+..++.+++++|+++|++++ +..+|+..|+.+.
T Consensus 152 ~~~~~~~~~~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 152 AFSGCVDIAEILLA--AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp HHHCCHHHHHHHHT--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred HHCCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999 899999999999999999999999999999999999986 6677877777643
No 21
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.5e-41 Score=292.56 Aligned_cols=231 Identities=17% Similarity=0.184 Sum_probs=192.4
Q ss_pred hcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHH
Q psy14202 102 VYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTL 181 (356)
Q Consensus 102 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L 181 (356)
+.+.+.+-+..++..+ +++..+. .+.||||+|+..|+.+++++|++.|++++.. +|.||||+|+..|+.++|++|
T Consensus 7 i~~~~~~~v~~lL~~~-~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK-DTFKADV--HGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GGGCCHHHHHHHHHST-TTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred HHhcCHHHHHHHHHhC-CCCccCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 3344444444444444 4555554 6778899999999999999999999888877 488999999999999999999
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-CcHHHHHHHcCcHHHHH
Q psy14202 182 VAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSH-KTPLMIAAQEGHVGLLE 260 (356)
Q Consensus 182 l~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~l~~a~~~~~~~~v~ 260 (356)
+++|++++.++..|.| |||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.++++
T Consensus 82 l~~ga~~~~~d~~g~t---------------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~ 146 (285)
T 3kea_A 82 LFSGLDDSQFDDKGNT---------------ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVS 146 (285)
T ss_dssp HHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHH
T ss_pred HHCCCCCCCcCCCCCc---------------HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999988888887 6777778888999999999999999988888 79999999999999999
Q ss_pred HHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcH-HHHHHhCCCHHHHHHHHHcCCCCCh
Q psy14202 261 LLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRP-LDRAISCRNVPVVQCFLRKGAKLGP 339 (356)
Q Consensus 261 ~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~-l~~A~~~~~~~i~~~Ll~~ga~~~~ 339 (356)
+|+++|++.... ..|.||||+|+..|+.+++++|++ .|++++..|..|.|| |++|+..++.+++++|+++|++++.
T Consensus 147 ~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~--~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 147 YFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLD--YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHH--HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred HHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHH--cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999998876322 278899999999999999999998 788999999999987 9999999999999999999999985
Q ss_pred h-HHHHhhCCcceeccC
Q psy14202 340 T-TWSMAAGKPEVMENF 355 (356)
Q Consensus 340 ~-~~a~~~~~~~~~~~l 355 (356)
. ..++..|+.++|++|
T Consensus 224 ~~~~a~~~~~~~iv~~L 240 (285)
T 3kea_A 224 ANLENVLLDDAEIAKMI 240 (285)
T ss_dssp TTGGGGTTTCHHHHHHH
T ss_pred CChhhhhcCCHHHHHHH
Confidence 5 567778888888876
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.8e-40 Score=278.39 Aligned_cols=211 Identities=26% Similarity=0.290 Sum_probs=199.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHh----CCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLE----FHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAA 203 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~ 203 (356)
.+.||||+||..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------ 81 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT------ 81 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC------
Confidence 67899999999999999999997 78999999999999999999999999999999999999999998887
Q ss_pred HcCCCCCChHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCC-CCCCc
Q psy14202 204 RGGHLQNLSPLMLAVKEGHWATAEKLLQHHA----PLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRED-GEGLT 278 (356)
Q Consensus 204 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t 278 (356)
||+.|+..++.+++++|++++. +++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.|
T Consensus 82 ---------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 152 (241)
T 1k1a_A 82 ---------AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRS 152 (241)
T ss_dssp ---------HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCC
T ss_pred ---------HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCc
Confidence 7778888899999999999987 889999999999999999999999999999999999998 78999
Q ss_pred HHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcc
Q psy14202 279 ALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPE 350 (356)
Q Consensus 279 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~ 350 (356)
|||+|+..|+.+++++|++ .|++++..|..|.||||+|+..++.+++++|+++|++++ +..+|+..|+.+
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 230 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQ--HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVID 230 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHH--TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHH
Confidence 9999999999999999999 899999999999999999999999999999999999986 667899999999
Q ss_pred eeccC
Q psy14202 351 VMENF 355 (356)
Q Consensus 351 ~~~~l 355 (356)
+++.|
T Consensus 231 i~~~l 235 (241)
T 1k1a_A 231 ILRGK 235 (241)
T ss_dssp HHTC-
T ss_pred HHhhh
Confidence 99876
No 23
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-41 Score=306.41 Aligned_cols=298 Identities=19% Similarity=0.217 Sum_probs=217.6
Q ss_pred CcccccccccChHHHHHHHhhcCCCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCChhhhhhhhhhhc
Q psy14202 24 SNKFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCSLRNVY 103 (356)
Q Consensus 24 ~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 103 (356)
..+|.-|+..|+.+.+..++++...+........+ ....+...... +. .....+....+.++.|+.
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~~~~--------~~-~~~~~~~~g~t~L~~Aa~ 103 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNG-----NDFLGDFNHTN--------LQ-IPTEPEPESPIKLHTEAA 103 (373)
T ss_dssp ----------------------------------------------------------------------CCCHHHHHHH
T ss_pred ccccccccCCccccchhhhhhhhccccCccccCCC-----CCccccccccc--------cc-cccCCCCCCccHHHHHhc
Confidence 56677788889988888888776654311100000 00001000000 00 011123445666777777
Q ss_pred CCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHH--------hCCCCCCccCCCCCcHHHHHHHCCCH
Q psy14202 104 SPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLL--------EFHACIDLANSQGRTPLSLAAGRGHM 175 (356)
Q Consensus 104 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~g~t~L~~A~~~g~~ 175 (356)
.+. +++++|+. .+++..+. ..+.||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.
T Consensus 104 ~~~-~~~~~L~~--~~~n~~d~-~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~ 179 (373)
T 2fo1_E 104 GSY-AITEPITR--ESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR 179 (373)
T ss_dssp SSS-CCCSCCST--TTTTTCCC-SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCc-hHHHHhcc--ccccccCC-cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChH
Confidence 544 67777754 45665553 26779999999999998888776 89999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCCCcHHHHHHH
Q psy14202 176 EAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHH---APLDQTDGSHKTPLMIAAQ 252 (356)
Q Consensus 176 ~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~l~~a~~ 252 (356)
++|++|+++|++++.++..|.| ||++|+..|+.+++++|++++ .+++..+..|.||||+|+.
T Consensus 180 ~iv~~Ll~~ga~~~~~~~~g~t---------------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 180 RLVAYLMKAGADPTIYNKSERS---------------ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCC---------------HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHCCCCCcccCCCCCC---------------HHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 9999999999999999999887 778888899999999999998 8999999999999999999
Q ss_pred cC---cHHHHHHHHHCCCCCcc--------CCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhC
Q psy14202 253 EG---HVGLLELLLDKGADILR--------EDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321 (356)
Q Consensus 253 ~~---~~~~v~~Ll~~g~~~~~--------~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~ 321 (356)
.+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++. .+++++..|..|.||||+|+..
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-KGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH-SCCCTTCCCTTCCCHHHHHHHH
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh-cCCCccCcCCCCCCHHHHHHHc
Confidence 88 89999999999999886 677899999999999999999999984 5699999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 322 RNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 322 ~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
|+.+++++|+++|++++ +..+|+..|+.+||++|
T Consensus 324 g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~L 365 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365 (373)
T ss_dssp TCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999996 77899999999999987
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.7e-42 Score=307.33 Aligned_cols=259 Identities=17% Similarity=0.149 Sum_probs=196.9
Q ss_pred ccCCCCcccccccccChHHHHHHHhhcCCCCCHHHHHHhHHHHHHHHHhcCCccccccccccchhHhhhhcCChhhhhhh
Q psy14202 19 RDEGESNKFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCS 98 (356)
Q Consensus 19 ~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (356)
.+..|.||||+|++.|+.++|++|++++.+++ ..+....+.+
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--------------------------------------~~d~~g~t~L 57 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPT--------------------------------------IQNRFGCTAL 57 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTT--------------------------------------CCCTTCCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--------------------------------------ccCCCCCcHH
Confidence 34566888888888888888888888765432 0112334556
Q ss_pred hhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhC----CCCCCc-----------------
Q psy14202 99 LRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEF----HACIDL----------------- 157 (356)
Q Consensus 99 ~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~----~~~~~~----------------- 157 (356)
+.|+..|+.+++++|++.|++++.. .+.||||+|+..|+.+++++|++. |.+++.
T Consensus 58 ~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (364)
T 3ljn_A 58 HLACKFGCVDTAKYLASVGEVHSLW----HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHV 133 (364)
T ss_dssp HHHHHHCCHHHHHHHHHHCCCCCCB----TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEE
T ss_pred HHHHHcCCHHHHHHHHHCCCCcccc----CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhcccc
Confidence 6777778888888888888866542 456788888888888888888887 666655
Q ss_pred cCCCCCcHHHHHHHCC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q psy14202 158 ANSQGRTPLSLAAGRG--HMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAP 235 (356)
Q Consensus 158 ~~~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 235 (356)
.+..|.||||+|+..| +.++|++|+++|++++.++..|.| ||++|+..|+.+++++|+++|++
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t---------------~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADET---------------PLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHHCSC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCC---------------HHHHHHHcCCHHHHHHHHhcccc
Confidence 6777888888888888 888888888888888888877776 66677777788888888888877
Q ss_pred -----CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcc-----
Q psy14202 236 -----LDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIE----- 305 (356)
Q Consensus 236 -----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~----- 305 (356)
++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .+.+++
T Consensus 199 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~ 276 (364)
T 3ljn_A 199 KSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ--KTDVFLIQACP 276 (364)
T ss_dssp SSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH--HSCHHHHHTCT
T ss_pred cccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH--cCCchhhhcCc
Confidence 88888888888888888888888888888888888888888888888888888888888887 444432
Q ss_pred -------cCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 306 -------HVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 306 -------~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
..+..+.||++.|+..++.+.+..|++.+++
T Consensus 277 ~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 277 YHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp TBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 2456677888888888877777777766543
No 25
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.8e-40 Score=297.12 Aligned_cols=227 Identities=19% Similarity=0.200 Sum_probs=210.7
Q ss_pred CChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHH
Q psy14202 90 QSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLA 169 (356)
Q Consensus 90 ~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 169 (356)
.+....+.++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|++.|++++. ..|.||||+|
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A 91 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR--FGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLA 91 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHH
Confidence 456778899999999999999999999999998776 678999999999999999999999996654 5799999999
Q ss_pred HHCCCHHHHHHHHHc----CCCCCC-----------------CCCCCCcHHHHHHHcCCCCCChHHHHHHHcC--CHHHH
Q psy14202 170 AGRGHMEAVRTLVAA----GASLGR-----------------TDTTGRCALVHAARGGHLQNLSPLMLAVKEG--HWATA 226 (356)
Q Consensus 170 ~~~g~~~iv~~Ll~~----g~~~~~-----------------~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~--~~~~~ 226 (356)
+..|+.++|++|++. |++++. ++..|.| |||+|+..| +.+++
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t---------------~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQT---------------ALHWCVGLGPEYLEMI 156 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCC---------------HHHHHHHSCGGGHHHH
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCC---------------HHHHHHHcCCchHHHH
Confidence 999999999999998 777665 5556665 788888888 89999
Q ss_pred HHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC-----CccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCC
Q psy14202 227 EKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGAD-----ILREDGEGLTALSWACMRGRIQAVTYLLDRDRG 301 (356)
Q Consensus 227 ~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~ 301 (356)
++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++ .|
T Consensus 157 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g 234 (364)
T 3ljn_A 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE--MG 234 (364)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT--TT
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH--cC
Confidence 999999999999999999999999999999999999999999 99999999999999999999999999999 89
Q ss_pred CCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCC
Q psy14202 302 AMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKL 337 (356)
Q Consensus 302 ~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 337 (356)
++++..|..|.|||++|+..|+.+++++|+++|+++
T Consensus 235 ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 235 IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 999999999999999999999999999999999875
No 26
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=272.75 Aligned_cols=228 Identities=25% Similarity=0.296 Sum_probs=208.5
Q ss_pred hhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCCcHHHHHH
Q psy14202 92 PAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLAN-SQGRTPLSLAA 170 (356)
Q Consensus 92 ~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~ 170 (356)
....+.++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|++.|.+++..+ ..|.||||+|+
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK--ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC--CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 3455678889999999999999999999987765 68899999999999999999999999987654 45999999999
Q ss_pred HCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy14202 171 GRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIA 250 (356)
Q Consensus 171 ~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a 250 (356)
..|+.+++++|++.|++++.++..|.| ||+.|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 149 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCS---------------CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA 149 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCC---------------HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Confidence 999999999999999999999988887 77888888999999999999999999999999999999
Q ss_pred HHcCc-HHHHHHHHHCCCCCccCCC-CCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy14202 251 AQEGH-VGLLELLLDKGADILREDG-EGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQ 328 (356)
Q Consensus 251 ~~~~~-~~~v~~Ll~~g~~~~~~~~-~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~ 328 (356)
+..+. .+++++|++.|++++..+. .|.||||+|+..|+.+++++|++ .|++++..|..|.|||++|++.++.++++
T Consensus 150 ~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 150 AYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE--AGANVDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp HHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHH--HTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 97666 8999999999999999987 89999999999999999999999 79999999999999999999999999999
Q ss_pred HHHHcCCCCC
Q psy14202 329 CFLRKGAKLG 338 (356)
Q Consensus 329 ~Ll~~ga~~~ 338 (356)
+|+++|++.+
T Consensus 228 ~L~~~~~~~~ 237 (240)
T 3eu9_A 228 HLQEARQAKG 237 (240)
T ss_dssp HHHHHC----
T ss_pred HHHHhhhccC
Confidence 9999998764
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=276.78 Aligned_cols=192 Identities=23% Similarity=0.304 Sum_probs=182.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
+|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------- 71 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHT---------- 71 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC----------
Confidence 4679999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
||+.|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 72 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 72 -----PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred -----HHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC
Confidence 77888888999999999999999986 456999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 288 RIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
+.+++++|++ .|++++. +..|.||||+|+..++.+++++|+++|++++
T Consensus 146 ~~~~v~~Ll~--~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 146 QRACVKKLLE--SGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp CHHHHHHHHH--HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHH--cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999 7899985 8899999999999999999999999999996
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.6e-39 Score=278.76 Aligned_cols=243 Identities=20% Similarity=0.153 Sum_probs=172.5
Q ss_pred CChhhhhhhhhhhcCCCHHHHHHHHHCCCC---ccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHH
Q psy14202 90 QSPAQALCSLRNVYSPNVKVSRLLLLSGAD---ANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPL 166 (356)
Q Consensus 90 ~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~---~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 166 (356)
.+....++++.|+..|+.+++++|++.|++ ++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND--LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 345667788888888888888888888877 444443 577888888888888888888888888888888888888
Q ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCH-HHHHHHHhcCCCCCCCCCCCCc
Q psy14202 167 SLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHW-ATAEKLLQHHAPLDQTDGSHKT 245 (356)
Q Consensus 167 ~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~-~~~~~Ll~~g~~~~~~~~~g~t 245 (356)
|+|+..|+.+++++|+++|++......... +..........+.++++.+...+.. .....+...+.+++.++..|.|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTY--LTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-------------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHH--hhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 888888888888888888876543332211 1111111112233445544444433 2333444556778888888888
Q ss_pred HHHHHHHcCcHHHHHHHHHCCCCCccCCCC-CCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCH
Q psy14202 246 PLMIAAQEGHVGLLELLLDKGADILREDGE-GLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNV 324 (356)
Q Consensus 246 ~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~ 324 (356)
|||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~--~gad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK--AGADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH--cCCCCcccccCCCCHHHHHHHcCCc
Confidence 888888888888888888888888888754 8888888888888888888888 7888888888888888888888888
Q ss_pred HHHHHHHHcCCCCC
Q psy14202 325 PVVQCFLRKGAKLG 338 (356)
Q Consensus 325 ~i~~~Ll~~ga~~~ 338 (356)
+++++|+++|++++
T Consensus 239 ~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 239 ILARLLRAHGAPEP 252 (282)
T ss_dssp HHHHHHHHTTCCCC
T ss_pred HHHHHHHHcCCCcC
Confidence 88888888888886
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.9e-39 Score=271.12 Aligned_cols=210 Identities=23% Similarity=0.271 Sum_probs=198.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 129 AAPALCLFAHEGNSEMIALLLEFHAC-IDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
+.++|+.|+..|+.+.+++|++.+.. ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------- 75 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS---------- 75 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC----------
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCC----------
Confidence 45789999999999999999987754 6778899999999999999999999999999999999999887
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
||+.|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|
T Consensus 76 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 150 (231)
T 3aji_A 76 -----PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG 150 (231)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred -----HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 777888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 288 RIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
+.+++++|++ .+++++.+|..|.|||++|+..++.+++++|+++|++++ +..+|+..++.+++++|
T Consensus 151 ~~~~v~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL 224 (231)
T 3aji_A 151 NLKMVHILLF--YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLA 224 (231)
T ss_dssp CHHHHHHHHH--TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHH
Confidence 9999999999 899999999999999999999999999999999999986 66788888888888876
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.8e-39 Score=278.13 Aligned_cols=216 Identities=20% Similarity=0.147 Sum_probs=162.8
Q ss_pred cCChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCcc----------
Q psy14202 89 CQSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLA---------- 158 (356)
Q Consensus 89 ~~~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~---------- 158 (356)
..+....++++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|++.+++....
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~--~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 40 LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER--GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117 (282)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT--TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence 3455678899999999999999999999999998766 6889999999999999999999998764322
Q ss_pred ---CCCCCcHHHHHHHCCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCC
Q psy14202 159 ---NSQGRTPLSLAAGRGHM-EAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHA 234 (356)
Q Consensus 159 ---~~~g~t~L~~A~~~g~~-~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~ 234 (356)
...+.++++.++..+.. .....+...+.+++.++..|.| |||+|+..|+.+++++|+++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t---------------~L~~A~~~g~~~~v~~Ll~~g~ 182 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT---------------PLHVAVIHKDAEMVRLLRDAGA 182 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHHTC
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC---------------HHHHHHHcCCHHHHHHHHHcCC
Confidence 23456677777655543 3344455567888888888887 7888888899999999999999
Q ss_pred CCCCCCCC-CCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCc
Q psy14202 235 PLDQTDGS-HKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLR 313 (356)
Q Consensus 235 ~~~~~~~~-g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t 313 (356)
+++.++.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.++..|.|
T Consensus 183 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t 260 (282)
T 1oy3_D 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA--HGAPEPEDGGDKLS 260 (282)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHH--TTCCCCCCC-----
T ss_pred CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHH--cCCCcCcCCCcccc
Confidence 99999865 9999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHhCCC
Q psy14202 314 PLDRAISCRN 323 (356)
Q Consensus 314 ~l~~A~~~~~ 323 (356)
|+++|.....
T Consensus 261 pl~~a~~~~~ 270 (282)
T 1oy3_D 261 PCSSSGSDSD 270 (282)
T ss_dssp ----------
T ss_pred cccccCCccc
Confidence 9999987664
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-38 Score=267.57 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=184.4
Q ss_pred hhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCC--CCCCc-cCCCCCcHHHHHHHC
Q psy14202 96 LCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFH--ACIDL-ANSQGRTPLSLAAGR 172 (356)
Q Consensus 96 ~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~--~~~~~-~~~~g~t~L~~A~~~ 172 (356)
++++.|+..|+.+++++|++.|.++..... ..+.||||+|+..|+.+++++|++.| .+++. .+..|.||||+|+..
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccccccCC-CCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 467788889999999999998877654322 36778899999999999999999988 55555 678899999999999
Q ss_pred CCHHHHHHHHHcC--CCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy14202 173 GHMEAVRTLVAAG--ASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIA 250 (356)
Q Consensus 173 g~~~iv~~Ll~~g--~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a 250 (356)
|+.+++++|+++| ++++.++..|.| ||+.|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVT---------------CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCC---------------HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCC---------------HHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 9999999999988 888888888876 67777788888999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHcCCHHHHHHhh-hcCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy14202 251 AQEGHVGLLELLLDKG-ADILREDGEGLTALSWACMRGRIQAVTYLL-DRDRGAMIEHVDINGLRPLDRAISCRNVPVVQ 328 (356)
Q Consensus 251 ~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll-~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~ 328 (356)
+..|+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+ + .|++++.+|..|.||+++|+.. ++++
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--~ga~~~~~~~~g~t~l~~A~~~---~~~~ 222 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK--YGAEYDLVDNKGAKAEDVALNE---QVKK 222 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHH--HCCCSCCBCTTSCBGGGGCSST---THHH
T ss_pred HHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHh--cCCCCCccCCCCCcHHHHHHHH---HHHH
Confidence 9999999999999998 889999999999999999999999999999 5 7899999999999999998654 5667
Q ss_pred HHHHc
Q psy14202 329 CFLRK 333 (356)
Q Consensus 329 ~Ll~~ 333 (356)
+|+++
T Consensus 223 ~l~~~ 227 (228)
T 2dzn_A 223 FFLNN 227 (228)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 76654
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=276.82 Aligned_cols=210 Identities=27% Similarity=0.367 Sum_probs=165.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCC--------CCccCCCCCcHHHHHHHCCCH-HHHHHHHHcCCCCCCCCCCCCcH
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHAC--------IDLANSQGRTPLSLAAGRGHM-EAVRTLVAAGASLGRTDTTGRCA 198 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~--------~~~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~g~~~~~~~~~~~t~ 198 (356)
.+.++|+.||..|+.++|++|++.+.+ ++..+..|.|||+.|+..+.. .++++|++.|++++.+|..|.|
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T- 88 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS- 88 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCC-
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC-
Confidence 455889999999999999999998875 455677899999999988765 5889999999999999999987
Q ss_pred HHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCc
Q psy14202 199 LVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLT 278 (356)
Q Consensus 199 l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 278 (356)
|||+|+..|+.+++++|++.|++++.++..|.||++.|+..++.+++++|++.|++++.+|..|.|
T Consensus 89 --------------pLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~T 154 (269)
T 4b93_B 89 --------------PLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNT 154 (269)
T ss_dssp --------------HHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred --------------HHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCC
Confidence 677788888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCC-c
Q psy14202 279 ALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGK-P 349 (356)
Q Consensus 279 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~-~ 349 (356)
|||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+.+++++|+++|++++ +..+|+.+|+ .
T Consensus 155 pL~~A~~~g~~~~v~~Ll~--~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~ 232 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQ--HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIM 232 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHH--TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHH--CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHH
Confidence 9999999999999999999 899999999999999999999999999999999999996 5567766665 3
Q ss_pred ceecc
Q psy14202 350 EVMEN 354 (356)
Q Consensus 350 ~~~~~ 354 (356)
+++++
T Consensus 233 ~lL~~ 237 (269)
T 4b93_B 233 ELLQV 237 (269)
T ss_dssp HHTTC
T ss_pred HHHHH
Confidence 44443
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=6.7e-38 Score=263.76 Aligned_cols=195 Identities=25% Similarity=0.269 Sum_probs=179.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC-----CCCCCCCCcHHHH
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEF-HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASL-----GRTDTTGRCALVH 201 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-----~~~~~~~~t~l~~ 201 (356)
.+.||||.|+..|+.+++++|++. |.+++.+|..|+||||+|+..|+.+++++|+++|+++ +.++..|.|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t---- 77 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQT---- 77 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCC----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcC----
Confidence 356899999999999999999998 9999999999999999999999999999999999886 556667766
Q ss_pred HHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-------------CCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy14202 202 AARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG-------------SHKTPLMIAAQEGHVGLLELLLDKGAD 268 (356)
Q Consensus 202 a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-------------~g~t~l~~a~~~~~~~~v~~Ll~~g~~ 268 (356)
|||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++
T Consensus 78 -----------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 146 (232)
T 2rfa_A 78 -----------ALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD 146 (232)
T ss_dssp -----------HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred -----------HHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 78888889999999999999999998765 799999999999999999999999999
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHH----HHhhhcCCCCCc------ccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 269 ILREDGEGLTALSWACMRGRIQAV----TYLLDRDRGAMI------EHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 269 ~~~~~~~g~t~l~~a~~~~~~~~v----~~Ll~~~~~~~~------~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
++.+|..|.||||+|+..|+.+++ ++|++ .+++. +.+|..|.|||++|+..|+.+++++|+++|++..
T Consensus 147 ~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~--~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 147 IRAQDSLGNTVLHILILQPNKTFACQMYNLLLS--YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH--TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh--cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 999999999999999999999988 99998 78777 5889999999999999999999999999998765
Q ss_pred h
Q psy14202 339 P 339 (356)
Q Consensus 339 ~ 339 (356)
.
T Consensus 225 ~ 225 (232)
T 2rfa_A 225 A 225 (232)
T ss_dssp -
T ss_pred h
Confidence 3
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.9e-38 Score=262.24 Aligned_cols=193 Identities=20% Similarity=0.256 Sum_probs=179.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHHHcC--CCCCC-CCCCCCcHHHHHHH
Q psy14202 129 AAPALCLFAHEGNSEMIALLLEFHACIDL-ANSQGRTPLSLAAGRGHMEAVRTLVAAG--ASLGR-TDTTGRCALVHAAR 204 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll~~g--~~~~~-~~~~~~t~l~~a~~ 204 (356)
+.||||.|+..|+.+++++|++.+.++.. .+..|.||||+|+..|+.+++++|+++| .+++. .+..|.|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t------- 74 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT------- 74 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC-------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC-------
Confidence 35789999999999999999999987554 7899999999999999999999999999 55544 6667776
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHH
Q psy14202 205 GGHLQNLSPLMLAVKEGHWATAEKLLQHH--APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSW 282 (356)
Q Consensus 205 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 282 (356)
||+.|+..|+.+++++|+++| ++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+
T Consensus 75 --------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 146 (228)
T 2dzn_A 75 --------PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHR 146 (228)
T ss_dssp --------HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred --------HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHH
Confidence 788888899999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHhhhcCCC-CCcccCCCCCCcHHHHHHhCCCHHHHHHHH-HcCCCCC
Q psy14202 283 ACMRGRIQAVTYLLDRDRG-AMIEHVDINGLRPLDRAISCRNVPVVQCFL-RKGAKLG 338 (356)
Q Consensus 283 a~~~~~~~~v~~Ll~~~~~-~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll-~~ga~~~ 338 (356)
|+..|+.+++++|++ .+ .+++.+|..|.|||++|+..++.+++++|+ ++|++++
T Consensus 147 A~~~~~~~~v~~Ll~--~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 147 AASVGSLKLIELLCG--LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHTTCHHHHHHHHT--TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHcCCHHHHHHHHh--cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 999999999999999 67 999999999999999999999999999999 9999997
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.5e-39 Score=279.93 Aligned_cols=221 Identities=18% Similarity=0.161 Sum_probs=202.6
Q ss_pred ChhhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q psy14202 91 SPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAA 170 (356)
Q Consensus 91 ~~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 170 (356)
+....++++.|+..|+.+++++|++.|++++..+ +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE----NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT----TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC----CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHH
Confidence 3456677888999999999999999999998773 679999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHcCCCCCCCCCCC-CcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy14202 171 GRGHMEAVRTLVAAGASLGRTDTTG-RCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMI 249 (356)
Q Consensus 171 ~~g~~~iv~~Ll~~g~~~~~~~~~~-~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~ 249 (356)
..|+.+++++|+++|++++.++..| .| ||+.|+..|+.+++++|+++|++.... ..|.||||+
T Consensus 104 ~~g~~~~v~~Ll~~ga~~~~~~~~g~~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~ 167 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRLMFYGKTGWKT---------------SFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHI 167 (285)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCSSSGGGS---------------HHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCCC---------------HHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHH
Confidence 9999999999999999999999888 56 788888899999999999999877332 289999999
Q ss_pred HHHcCcHHHHHHHHHCCCCCccCCCCCCcH-HHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q psy14202 250 AAQEGHVGLLELLLDKGADILREDGEGLTA-LSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQ 328 (356)
Q Consensus 250 a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~ 328 (356)
|+..|+.+++++|+++|++++.++..|.|| ||+|+..|+.+++++|++ .|++++..+. .|+..++.++++
T Consensus 168 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~--~gad~~~~~~-------~a~~~~~~~iv~ 238 (285)
T 3kea_A 168 TIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFK--YDINIYSANL-------ENVLLDDAEIAK 238 (285)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTT--SCBCSTTTTG-------GGGTTTCHHHHH
T ss_pred HHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH--cCCCCCCCCh-------hhhhcCCHHHHH
Confidence 999999999999999999999999999998 999999999999999999 8999998873 568899999999
Q ss_pred HHHHcCCCCChh
Q psy14202 329 CFLRKGAKLGPT 340 (356)
Q Consensus 329 ~Ll~~ga~~~~~ 340 (356)
+|+++|++++..
T Consensus 239 ~Ll~~g~~~~~~ 250 (285)
T 3kea_A 239 MIIEKHVEYKSD 250 (285)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHcCCCCCCc
Confidence 999999987643
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.5e-38 Score=262.21 Aligned_cols=199 Identities=26% Similarity=0.307 Sum_probs=186.7
Q ss_pred CCHHHHHHHHhCCCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHH
Q psy14202 140 GNSEMIALLLEFHACIDLA-NSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAV 218 (356)
Q Consensus 140 g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~ 218 (356)
|+.+++++|++.|.+++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.| ||+.|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~ 66 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT---------------PLHAAV 66 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC---------------HHHHHH
Confidence 6788899999999998776 889999999999999999999999999999999999887 778888
Q ss_pred HcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 219 KEGHWATAEKLLQHHA-PLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 219 ~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
..++.+++++|++++. +++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 8899999999999987 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 298 RDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 298 ~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
.+++++..|..|.|||++|+..++.+++++|+++|++++ +..+|+..|+.+++++|
T Consensus 147 --~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 210 (223)
T 2f8y_A 147 --NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 210 (223)
T ss_dssp --TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred --cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHH
Confidence 899999999999999999999999999999999999986 67899999999999986
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=261.29 Aligned_cols=211 Identities=22% Similarity=0.278 Sum_probs=196.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTT-GRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-~~t~l~~a~~~~ 206 (356)
.+.++|+.|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.|
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t--------- 78 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST--------- 78 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBC---------
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCC---------
Confidence 3557799999999999999999999999999999999999999999999999999999988755543 555
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMR 286 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 286 (356)
||+.|+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 79 ------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 79 ------PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp ------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ------hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Confidence 78888899999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC-HHHHHHhhhcCCCCCcccCCC-CCCcHHHHHHhCCCHHHHHHHHHcCCCCC--------hhHHHHhhCCcceeccC
Q psy14202 287 GR-IQAVTYLLDRDRGAMIEHVDI-NGLRPLDRAISCRNVPVVQCFLRKGAKLG--------PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 287 ~~-~~~v~~Ll~~~~~~~~~~~~~-~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--------~~~~a~~~~~~~~~~~l 355 (356)
++ .+++++|++ .+.+++..+. .|.|||++|+..++.+++++|+++|++++ +..+|+..|+.+++++|
T Consensus 153 ~~~~~~~~~L~~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L 229 (240)
T 3eu9_A 153 THSVDPTRLLLT--FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHL 229 (240)
T ss_dssp CCSSTTHHHHHH--TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred CChHHHHHHHHh--cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 65 899999999 8999999987 89999999999999999999999999996 77899999999999986
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-38 Score=273.94 Aligned_cols=194 Identities=27% Similarity=0.339 Sum_probs=134.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
.+.|+|+.||..|+.+++++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t---------- 108 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWI---------- 108 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC----------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc----------
Confidence 3446677777777777777777777777777777777777777777777777777777777777666665
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCc----------------
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDK-GADIL---------------- 270 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~-g~~~~---------------- 270 (356)
|||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++++.. |.+++
T Consensus 109 -----pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
T 1s70_B 109 -----PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQ 183 (299)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHH
Confidence 55566666667777777777777777777777777777777777766665543 33332
Q ss_pred ----------cCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 271 ----------REDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 271 ----------~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
..+..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|+.+++++|+++|++++
T Consensus 184 ~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ--ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp HHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT--TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH--cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 244566777777777777777777776 667777777777777777777777777777777777765
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.7e-36 Score=249.49 Aligned_cols=190 Identities=23% Similarity=0.301 Sum_probs=180.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHA-CIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~ 206 (356)
.+.++|+.|+..|+.+.++.|++.+. +++..+..|.||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t--------- 74 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDS--------- 74 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC---------
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC---------
Confidence 35688999999999999999999886 89999999999999999999999999999999999999998887
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCccCCCCCCcHHHHHH
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLL-QHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG-ADILREDGEGLTALSWAC 284 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~ 284 (356)
||++|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+
T Consensus 75 ------~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 75 ------PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH
T ss_pred ------HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH
Confidence 777888889999999999 567899999999999999999999999999999999 999999999999999999
Q ss_pred HcCC-----HHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q psy14202 285 MRGR-----IQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKG 334 (356)
Q Consensus 285 ~~~~-----~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 334 (356)
..++ .+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++|
T Consensus 149 ~~~~~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 149 GLREGNQLYQDIVKLLME--NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HSSCCSHHHHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HhccchhhHHHHHHHHHH--CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9998 999999999 89999999999999999999999999999999987
No 40
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1e-36 Score=242.67 Aligned_cols=159 Identities=33% Similarity=0.509 Sum_probs=115.1
Q ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q psy14202 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSH 243 (356)
Q Consensus 164 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g 243 (356)
++|+.|++.|+.++|++|+++|++++.+|..|.| ||+.|+..++.+++++|+++|++++.++..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t---------------~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g 70 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRT---------------PLHHAAENGHKEVVKLLISKGADVNAKDSDG 70 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC---------------HHHHHHHcCCHHHHHHHHhcccchhhhccCC
Confidence 3566677777777777777777777777766665 5556666666777777777777777777777
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCC
Q psy14202 244 KTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRN 323 (356)
Q Consensus 244 ~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~ 323 (356)
.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|++ .|++++.+|.+|.|||++|+..|+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~--~gad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS--KGADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCCCHHHHHHHcCC
Confidence 777777777777777777777777777777777777777777777777777777 677777777777888888887788
Q ss_pred HHHHHHHHHcCCCCCh
Q psy14202 324 VPVVQCFLRKGAKLGP 339 (356)
Q Consensus 324 ~~i~~~Ll~~ga~~~~ 339 (356)
.+++++|+++||+++.
T Consensus 149 ~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 149 EEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHHTC------
T ss_pred HHHHHHHHHCCCCcCC
Confidence 8888888888877753
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-37 Score=272.13 Aligned_cols=222 Identities=25% Similarity=0.268 Sum_probs=193.5
Q ss_pred hhhhhhhhhhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHC
Q psy14202 93 AQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGR 172 (356)
Q Consensus 93 ~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 172 (356)
...+.++.|+..|+.+++++|++.|++++..+. .+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANV--DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT--TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 456678899999999999999999999998775 678999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHH----------------------
Q psy14202 173 GHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLL---------------------- 230 (356)
Q Consensus 173 g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll---------------------- 230 (356)
|+.++|++|+++|++++..+..|.|||++|+. .++.+++++++
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~---------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 181 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE---------------EAMEELLQNEVNRQGVDIEAARKEEERIMLRDA 181 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS---------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh---------------cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHH
Confidence 99999999999999999999999987666554 33344444333
Q ss_pred ----hc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcc
Q psy14202 231 ----QH-HAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIE 305 (356)
Q Consensus 231 ----~~-g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~ 305 (356)
.. .......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++
T Consensus 182 ~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~--~gad~~ 259 (299)
T 1s70_B 182 RQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE--NLCDME 259 (299)
T ss_dssp HHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTT
T ss_pred HHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHH--cCCCCC
Confidence 22 33334466789999999999999999999999999999999999999999999999999999999 899999
Q ss_pred cCCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q psy14202 306 HVDINGLRPLDRAISCRNVPVVQCFLRKG 334 (356)
Q Consensus 306 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 334 (356)
.+|..|.|||++|++ +..+.++.+++..
T Consensus 260 ~~d~~g~t~l~~A~~-~~~~~l~~l~~~~ 287 (299)
T 1s70_B 260 AVNKVGQTAFDVADE-DILGYLEELQKKQ 287 (299)
T ss_dssp CCCTTSCCTTTSCCS-GGGHHHHHHHHHT
T ss_pred CcCCCCCCHHHHHHH-HHHHHHHHHHHHH
Confidence 999999999999965 4456666666554
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.3e-38 Score=264.66 Aligned_cols=194 Identities=25% Similarity=0.286 Sum_probs=180.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCC----CCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHA----CIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAA 203 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~ 203 (356)
.+.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------ 80 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNT------ 80 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCC------
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC------
Confidence 67789999999999999999998765 68999999999999999999999999999999999999999887
Q ss_pred HcCCCCCChHHHHHHHcCCHHHHHHHHhcCCC------CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCC-CC
Q psy14202 204 RGGHLQNLSPLMLAVKEGHWATAEKLLQHHAP------LDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDG-EG 276 (356)
Q Consensus 204 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~-~g 276 (356)
|||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|
T Consensus 81 ---------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 151 (236)
T 1ikn_D 81 ---------PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 151 (236)
T ss_dssp ---------HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC
T ss_pred ---------HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 77788888999999999999876 567788899999999999999999999999999999998 99
Q ss_pred CcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 277 LTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 277 ~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++|++..
T Consensus 152 ~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 152 RTALHLAVDLQNPDLVSLLLK--CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHT--TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHH--cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 999999999999999999999 899999999999999999999999999999999999764
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.6e-37 Score=262.63 Aligned_cols=193 Identities=21% Similarity=0.233 Sum_probs=177.7
Q ss_pred CchHHHHHHHcCCHH----HHHHHHhCCCCCCc----cCCCCCcHHHHHHHC---CCHHHHHHHHHcCCCCCCCC-----
Q psy14202 129 AAPALCLFAHEGNSE----MIALLLEFHACIDL----ANSQGRTPLSLAAGR---GHMEAVRTLVAAGASLGRTD----- 192 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~----~v~~Ll~~~~~~~~----~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~----- 192 (356)
|.||||.|+..|+.+ ++++|++.|.+++. .+..|.||||+|+.. |+.++|++|++.|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 568999999999997 66778889999998 899999999999999 99999999999998776433
Q ss_pred ------CCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CCcHHHHHHHc
Q psy14202 193 ------TTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGS-------------HKTPLMIAAQE 253 (356)
Q Consensus 193 ------~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-------------g~t~l~~a~~~ 253 (356)
..|. ||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..
T Consensus 82 ~~~~~d~~g~---------------t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 146 (256)
T 2etb_A 82 QCTDEFYQGH---------------SALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146 (256)
T ss_dssp CCCSTTTTTC---------------CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT
T ss_pred ccccccccCC---------------CHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHc
Confidence 4455 4888899999999999999999999999886 99999999999
Q ss_pred CcHHHHHHHHH---CCCCCccCCCCCCcHHHHHHH--cCCHH-------HHHHhhhcCCCCCc-------ccCCCCCCcH
Q psy14202 254 GHVGLLELLLD---KGADILREDGEGLTALSWACM--RGRIQ-------AVTYLLDRDRGAMI-------EHVDINGLRP 314 (356)
Q Consensus 254 ~~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~a~~--~~~~~-------~v~~Ll~~~~~~~~-------~~~~~~g~t~ 314 (356)
|+.+++++|++ +|++++.+|..|.||||+|+. .++.+ ++++|++ .|+++ +.+|..|.||
T Consensus 147 ~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~--~ga~~~~~~~~~~~~d~~g~tp 224 (256)
T 2etb_A 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ--MGARLCPTVQLEEISNHQGLTP 224 (256)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH--HHHHHSTTCCGGGCCCTTSCCH
T ss_pred CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH--cCCCcccccccccccCCCCCCH
Confidence 99999999999 999999999999999999999 88888 9999999 89999 8999999999
Q ss_pred HHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 315 LDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 315 l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
|++|+..|+.+++++|+++|++..
T Consensus 225 L~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 225 LKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCC
Confidence 999999999999999999997654
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-35 Score=236.22 Aligned_cols=159 Identities=36% Similarity=0.545 Sum_probs=146.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCC
Q psy14202 131 PALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQN 210 (356)
Q Consensus 131 ~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~ 210 (356)
..|+.||..|+.++|++|++.|+++|.+|..|+||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~T------------- 72 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRT------------- 72 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCC-------------
Confidence 3589999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHH
Q psy14202 211 LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQ 290 (356)
Q Consensus 211 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 290 (356)
|||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|.+|.|||++|++.|+.+
T Consensus 73 --pLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 73 --PLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp --HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred --HHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCccc
Q psy14202 291 AVTYLLDRDRGAMIEH 306 (356)
Q Consensus 291 ~v~~Ll~~~~~~~~~~ 306 (356)
++++|++ .|++++.
T Consensus 151 iv~~Ll~--~GA~ie~ 164 (169)
T 4gpm_A 151 VVKLLEK--QGGWLEH 164 (169)
T ss_dssp HHHHHHT--C------
T ss_pred HHHHHHH--CCCCcCC
Confidence 9999998 8988874
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.5e-36 Score=260.59 Aligned_cols=194 Identities=20% Similarity=0.227 Sum_probs=172.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHh----CCCCCC----ccCCCCCcHHHHHHHC---CCHHHHHHHHHcCCCCCC------
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLE----FHACID----LANSQGRTPLSLAAGR---GHMEAVRTLVAAGASLGR------ 190 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~----~~~~~~----~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~------ 190 (356)
.+.|+||.|+..|+.++++.|++ .+.+++ ..+..|.||||+|+.. |+.++|++|+++|++++.
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 67899999999999999988886 566665 3478999999999987 999999999999865321
Q ss_pred -----CCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCCcHHHHHH
Q psy14202 191 -----TDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG--------------SHKTPLMIAA 251 (356)
Q Consensus 191 -----~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~--------------~g~t~l~~a~ 251 (356)
.+..|.| |||+|+..|+.+++++|+++|++++.++. .|.||||+|+
T Consensus 92 ~~~~~~d~~g~t---------------pL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 156 (273)
T 2pnn_A 92 ASYTDSYYKGQT---------------ALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAA 156 (273)
T ss_dssp CCCCSTTTTTCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHH
T ss_pred cccccccCCCCC---------------HHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHH
Confidence 3445554 88889999999999999999999999987 7999999999
Q ss_pred HcCcHHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------HHHHHHhhhcCCCCCcc-------cCCCCCC
Q psy14202 252 QEGHVGLLELLLD---KGADILREDGEGLTALSWACMRGR---------IQAVTYLLDRDRGAMIE-------HVDINGL 312 (356)
Q Consensus 252 ~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~~~~~~~~-------~~~~~g~ 312 (356)
..|+.+++++|++ +|++++.+|..|.||||+|+..|+ .+++++|++ .|++++ .+|..|.
T Consensus 157 ~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~--~ga~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 157 CTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI--LGAKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH--HHHHHCTTCCGGGCCCTTSC
T ss_pred HcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH--hhhhcccccccccccCCCCC
Confidence 9999999999999 999999999999999999999988 899999999 788886 5899999
Q ss_pred cHHHHHHhCCCHHHHHHHHHcCC-CCC
Q psy14202 313 RPLDRAISCRNVPVVQCFLRKGA-KLG 338 (356)
Q Consensus 313 t~l~~A~~~~~~~i~~~Ll~~ga-~~~ 338 (356)
|||++|+..|+.+++++|+++|| |+.
T Consensus 235 TpL~~A~~~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 235 TPLALAASSGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTC---
T ss_pred CHHHHHHHhChHHHHHHHHHCCCCCch
Confidence 99999999999999999999999 665
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-36 Score=267.92 Aligned_cols=195 Identities=21% Similarity=0.205 Sum_probs=162.8
Q ss_pred hhcCCCHHHHHHHHHCCCCccc-cccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCC---HH
Q psy14202 101 NVYSPNVKVSRLLLLSGADANH-ITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGH---ME 176 (356)
Q Consensus 101 a~~~~~~~~~~~ll~~g~~~~~-~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~---~~ 176 (356)
++..+..+++++|++.|+++|. .+. .+.||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+ .+
T Consensus 104 a~~~~~~~~~~~l~~~g~dvn~~~d~--~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 104 SFDSLLQEVNDAFPNTQLNLNIPVDE--HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp CHHHHHHHHHHHCTTSCCCSCSCCST--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHhhHHHHHHHHHhcCCCcccccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHH
Confidence 4444556889999999999998 555 68899999999999999999999999999999999999999999998 78
Q ss_pred HHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHH----cCCHHHHHHHHhc-------------------
Q psy14202 177 AVRTLVAAG-ASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVK----EGHWATAEKLLQH------------------- 232 (356)
Q Consensus 177 iv~~Ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~------------------- 232 (356)
+++.|++.+ ++++.++..|.| |||+|+. .|+.+++++|++.
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~t---------------pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~ 246 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRT---------------ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCC---------------HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---
T ss_pred HHHHHHHhhhccccCCCCCCCC---------------HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhc
Confidence 888888886 778899999988 5555665 7889999999987
Q ss_pred -CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCC
Q psy14202 233 -HAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDING 311 (356)
Q Consensus 233 -g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g 311 (356)
|++++.++..|.||||.|+. +++|+++ +++.+|..|+||||+|++.|+.+++++|++ .|++++.+|..|
T Consensus 247 ~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~--~Gad~~~~d~~G 316 (327)
T 1sw6_A 247 KESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLD--YGADPFIANKSG 316 (327)
T ss_dssp -------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHH--TTCCTTCCCTTS
T ss_pred ccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCcccCCCC
Confidence 89999999999999999985 8999998 588899999999999999999999999999 899999999999
Q ss_pred CcHHHHHHhCC
Q psy14202 312 LRPLDRAISCR 322 (356)
Q Consensus 312 ~t~l~~A~~~~ 322 (356)
.|||++|++.|
T Consensus 317 ~TpL~~A~~~g 327 (327)
T 1sw6_A 317 LRPVDFGAGLE 327 (327)
T ss_dssp CCGGGGTCC--
T ss_pred CCHHHHHHhcC
Confidence 99999998764
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=243.83 Aligned_cols=206 Identities=23% Similarity=0.210 Sum_probs=177.7
Q ss_pred hhhhhhhhhcCCCHHHHHHHHHC-CCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCC-----CccCCCCCcHHH
Q psy14202 94 QALCSLRNVYSPNVKVSRLLLLS-GADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACI-----DLANSQGRTPLS 167 (356)
Q Consensus 94 ~~~~~~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~g~t~L~ 167 (356)
..+.++.|+..|+.+++++|++. |.+++..+. .+.||||+|+..|+.+++++|++.|+++ +..+..|.||||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGA--MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCC--CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 34678889999999999999998 999998766 6889999999999999999999999886 667789999999
Q ss_pred HHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy14202 168 LAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPL 247 (356)
Q Consensus 168 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 247 (356)
+|+..|+.+++++|+++|++++.++... .+.......+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGS--VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSG--GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCc--ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 9999999999999999999998876521 11111111122345689999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHH----HHHHHCCCCC------ccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcc
Q psy14202 248 MIAAQEGHVGLL----ELLLDKGADI------LREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIE 305 (356)
Q Consensus 248 ~~a~~~~~~~~v----~~Ll~~g~~~------~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~ 305 (356)
|+|+..++.+++ ++|+++|++. +.+|..|.||||+|++.|+.+++++|++ ++....
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~--~g~~~~ 224 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ--KRKHIA 224 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH--HHHHC-
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh--cCccch
Confidence 999999999988 9999999988 5889999999999999999999999998 554444
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.4e-34 Score=233.61 Aligned_cols=187 Identities=22% Similarity=0.311 Sum_probs=174.6
Q ss_pred hhhhhhhhhcCCCHHHHHHHHHCCC-CccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHC
Q psy14202 94 QALCSLRNVYSPNVKVSRLLLLSGA-DANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGR 172 (356)
Q Consensus 94 ~~~~~~~a~~~~~~~~~~~ll~~g~-~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 172 (356)
..+.++.|+..|+.+.++.|+..+. +++..+. .+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDT--EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3457888999999999999999887 8887665 678999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHH
Q psy14202 173 GHMEAVRTLV-AAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHH-APLDQTDGSHKTPLMIA 250 (356)
Q Consensus 173 g~~~iv~~Ll-~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~a 250 (356)
|+.+++++|+ ..+++++..+..|.| ||+.|+..|+.+++++|+++| .+++.++..|.||||+|
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGN---------------ALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCC---------------SHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCc---------------HHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 9999999999 567899999998887 677888889999999999999 99999999999999999
Q ss_pred HHcCc-----HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 251 AQEGH-----VGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 251 ~~~~~-----~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
+..++ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 99988 999999999999999999999999999999999999999997
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.8e-36 Score=253.74 Aligned_cols=213 Identities=19% Similarity=0.157 Sum_probs=185.6
Q ss_pred ChhhhhhhhhhhcCCCHHHHHHHHHCCC----CccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHH
Q psy14202 91 SPAQALCSLRNVYSPNVKVSRLLLLSGA----DANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPL 166 (356)
Q Consensus 91 ~~~~~~~~~~a~~~~~~~~~~~ll~~g~----~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L 166 (356)
+....+.++.|+..|+.+++++|++.+. +++..+. .+.||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN--LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT--TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 3455677888999999999999988775 5666554 688999999999999999999999999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 167 SLAAGRGHMEAVRTLVAAGAS------LGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 167 ~~A~~~g~~~iv~~Ll~~g~~------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
|+|+..|+.+++++|++.|++ ++..+..|.| |||+|+..|+.+++++|+++|++++.++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 147 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT---------------CLHLASIHGYLGIVELLVSLGADVNAQE 147 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC---------------HHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999876 3455556665 7888889999999999999999999999
Q ss_pred C-CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcc--cCCCCCCcHHHH
Q psy14202 241 G-SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIE--HVDINGLRPLDR 317 (356)
Q Consensus 241 ~-~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~--~~~~~g~t~l~~ 317 (356)
. .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++ .|++.. ..+..|.||.+.
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~--~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ--LTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHT--TSCGGGSSCCCCCTTTCCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHH--cchhhhhcCCccchHHHHhh
Confidence 7 99999999999999999999999999999999999999999999999999999999 787766 788889998876
Q ss_pred HHhCC
Q psy14202 318 AISCR 322 (356)
Q Consensus 318 A~~~~ 322 (356)
+....
T Consensus 226 ~~~~~ 230 (236)
T 1ikn_D 226 ESEFT 230 (236)
T ss_dssp C----
T ss_pred hcccc
Confidence 65543
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=5.2e-35 Score=250.41 Aligned_cols=194 Identities=21% Similarity=0.256 Sum_probs=172.3
Q ss_pred CCchHHHHHHHcCCHHH----HHHHHhCCCCCCccC----CCCCcHHHHHH---HCCCHHHHHHHHHcCCC---------
Q psy14202 128 GAAPALCLFAHEGNSEM----IALLLEFHACIDLAN----SQGRTPLSLAA---GRGHMEAVRTLVAAGAS--------- 187 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~----v~~Ll~~~~~~~~~~----~~g~t~L~~A~---~~g~~~iv~~Ll~~g~~--------- 187 (356)
.+.++|+.|+..|+.+. +++|++.+.+++..+ ..|.||||+|+ ..|+.++|++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 35688999999999995 455555999988776 67999999999 77999999999998754
Q ss_pred --CCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC--------------CCCCcHHHHHH
Q psy14202 188 --LGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD--------------GSHKTPLMIAA 251 (356)
Q Consensus 188 --~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~--------------~~g~t~l~~a~ 251 (356)
++..|..|.| |||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus 84 ~~~~~~d~~g~t---------------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 148 (260)
T 3jxi_A 84 SPFRDVYYRGQT---------------ALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAA 148 (260)
T ss_dssp CCBCCSSEESBC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHH
T ss_pred ccccccccCCCC---------------HHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHH
Confidence 3333445555 8888899999999999999999999998 68999999999
Q ss_pred HcCcHHHHHHHHH---CCCCCccCCCCCCcHHHHHHHcCC---------HHHHHHhhhcCCCCCc-------ccCCCCCC
Q psy14202 252 QEGHVGLLELLLD---KGADILREDGEGLTALSWACMRGR---------IQAVTYLLDRDRGAMI-------EHVDINGL 312 (356)
Q Consensus 252 ~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~~~~~~~-------~~~~~~g~ 312 (356)
..|+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|++ .|+++ +..|..|.
T Consensus 149 ~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~--~ga~~~~~~~~~~~~d~~g~ 226 (260)
T 3jxi_A 149 CTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI--KCAKLFPDTNLEALLNNDGL 226 (260)
T ss_dssp HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH--HHHHHCTTCCGGGCCCTTSC
T ss_pred HcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH--hCcccccccchhhcccCCCC
Confidence 9999999999999 999999999999999999999887 799999999 78888 67999999
Q ss_pred cHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 313 RPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 313 t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
|||++|+..|+.+++++|+++|++..
T Consensus 227 tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 227 SPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999999999997654
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2e-35 Score=261.23 Aligned_cols=209 Identities=20% Similarity=0.138 Sum_probs=166.2
Q ss_pred CCHHHHHHHHHCCCCcccccc---------------ccCCchHHHHHHHcCCHHHHHHHHhCCCCCCc-cCCCCCcHHHH
Q psy14202 105 PNVKVSRLLLLSGADANHITE---------------FLGAAPALCLFAHEGNSEMIALLLEFHACIDL-ANSQGRTPLSL 168 (356)
Q Consensus 105 ~~~~~~~~ll~~g~~~~~~~~---------------~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~ 168 (356)
|+.+++++|+++|++++...- .....++.+.|+..+..++++.|++.|++++. .+..|+||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 888999999999988765211 00112335788888889999999999999999 89999999999
Q ss_pred HHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCC---HHHHHHHHhcC-CCCCCCCCCCC
Q psy14202 169 AAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGH---WATAEKLLQHH-APLDQTDGSHK 244 (356)
Q Consensus 169 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~---~~~~~~Ll~~g-~~~~~~~~~g~ 244 (356)
|+..|+.++|++|+++|++++.++..|.| |||+|+..|+ .++++.|++.+ .+++.++..|.
T Consensus 138 Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~T---------------pLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~ 202 (327)
T 1sw6_A 138 LTSIANLELVKHLVKHGSNRLYGDNMGES---------------CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNR 202 (327)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTBCCTTCCC---------------HHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCC---------------HHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCC
Confidence 99999999999999999999999999998 5666666666 56777788775 67999999999
Q ss_pred cHHHHHHH----cCcHHHHHHHHHC--------------------CCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCC
Q psy14202 245 TPLMIAAQ----EGHVGLLELLLDK--------------------GADILREDGEGLTALSWACMRGRIQAVTYLLDRDR 300 (356)
Q Consensus 245 t~l~~a~~----~~~~~~v~~Ll~~--------------------g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~ 300 (356)
||||+|+. .|+.+++++|++. |++++.++..|.||||.|+. +++|++ .
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~--~ 274 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIA--N 274 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHH--H
T ss_pred CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHH--h
Confidence 99999999 8999999999987 89999999999999999985 899998 4
Q ss_pred CCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy14202 301 GAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 301 ~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 338 (356)
+++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 275 --~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 275 --MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp --TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred --CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 689999999999999999999999999999999997
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=246.03 Aligned_cols=193 Identities=19% Similarity=0.244 Sum_probs=176.0
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCC--CCccCCCCCcHHHHHHHCCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCC
Q psy14202 131 PALCLFAHEGNSEMIALLLEFHAC--IDLANSQGRTPLSLAAGRGHMEAVRTLVAAGA-SLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 131 ~~l~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~t~l~~a~~~~~ 207 (356)
+++|.|+..|+.+.++.+++.+.+ +|..|..|.||||+|+..|+.++|++|++.|+ +++..+..|.|||++|+....
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 347889999999999999988766 88899999999999999999999999999997 999999999986555542211
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
...++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 158 ----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 158 ----------KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp ----------CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ----------hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 1567789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q psy14202 288 RIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKG 334 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 334 (356)
+.+++++|++. .|++++.+|..|.|||++|+..|+.+++++|++++
T Consensus 228 ~~~iv~~Ll~~-~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 228 HKEIAGLLLAV-PSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CHHHHHHHHTS-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHhc-CCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999975 79999999999999999999999999999999985
No 53
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.7e-33 Score=227.85 Aligned_cols=162 Identities=33% Similarity=0.366 Sum_probs=133.1
Q ss_pred CccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q psy14202 156 DLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAP 235 (356)
Q Consensus 156 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 235 (356)
+.+|..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..++.+++++|+++|++
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~ 93 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGST---------------ALIWAVKNNRLGIAEKLLSKGSN 93 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCcc---------------HHHHHHHcCCHHHHHHHHHCCCC
Confidence 556777888888888888888888888888888877777776 56667777778888888888888
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHH
Q psy14202 236 LDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPL 315 (356)
Q Consensus 236 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l 315 (356)
++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+
T Consensus 94 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 94 VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE--LGADISARDLTGLTAE 171 (192)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCCHH
Confidence 88888888888888888888888888888888888888888888888888888888888887 7888888888888888
Q ss_pred HHHHhCCCHHHHHHHHHcC
Q psy14202 316 DRAISCRNVPVVQCFLRKG 334 (356)
Q Consensus 316 ~~A~~~~~~~i~~~Ll~~g 334 (356)
++|+..|+.+++++|+++|
T Consensus 172 ~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 172 ASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHhcc
Confidence 8888888888888888765
No 54
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5e-33 Score=222.90 Aligned_cols=169 Identities=24% Similarity=0.285 Sum_probs=137.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 129 AAPALCLFAHEGNSEMIALLLEFHAC-IDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
+.+|||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.++|++|+++|++++.++..|.|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------- 71 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERES---------- 71 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCC----------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCC----------
Confidence 34668899999999999999988876 7778888889999999999999999999888888888888776
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
|||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 72 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 72 -----ALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp -----HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred -----HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhC
Confidence 677777788888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHhhhcCCCCCcccCCCCCCcH
Q psy14202 288 RIQAVTYLLDRDRGAMIEHVDINGLRP 314 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~~~~~~~~g~t~ 314 (356)
+.+++++|++ .+.++...+..|.||
T Consensus 147 ~~~~~~~L~~--~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 147 YRKVQQVIEN--HILKLFQSNLVPADP 171 (172)
T ss_dssp CHHHHHHHHH--HHHHHSCC-------
T ss_pred cHHHHHHHHH--HHHHHhcccCCCCCC
Confidence 8888888888 777777777777766
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.5e-33 Score=240.79 Aligned_cols=199 Identities=21% Similarity=0.191 Sum_probs=170.3
Q ss_pred hhhhhhhhcCCCHH----HHHHHHHCCCCccc----cccccCCchHHHHHHHc---CCHHHHHHHHhCCCCCCcc-----
Q psy14202 95 ALCSLRNVYSPNVK----VSRLLLLSGADANH----ITEFLGAAPALCLFAHE---GNSEMIALLLEFHACIDLA----- 158 (356)
Q Consensus 95 ~~~~~~a~~~~~~~----~~~~ll~~g~~~~~----~~~~~~~~~~l~~A~~~---g~~~~v~~Ll~~~~~~~~~----- 158 (356)
.+.++.|+..|+.+ ++++|++.|++++. .+. .+.||||+|+.. |+.+++++|++.|++++..
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~--~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS--TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTT--TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCC--CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 35678899999996 67888889999987 444 688999999999 9999999999998876533
Q ss_pred ------CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHh-
Q psy14202 159 ------NSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQ- 231 (356)
Q Consensus 159 ------~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~- 231 (356)
|..|.||||+|+..|+.++|++|+++|++++.++..+.++.. .......|.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKH--QGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC--SSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccccc--ccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 377999999999999999999999999999999876211100 00000013358888999999999999999
Q ss_pred --cCCCCCCCCCCCCcHHHHHHH--cCcHH-------HHHHHHHCCCCC-------ccCCCCCCcHHHHHHHcCCHHHHH
Q psy14202 232 --HHAPLDQTDGSHKTPLMIAAQ--EGHVG-------LLELLLDKGADI-------LREDGEGLTALSWACMRGRIQAVT 293 (356)
Q Consensus 232 --~g~~~~~~~~~g~t~l~~a~~--~~~~~-------~v~~Ll~~g~~~-------~~~~~~g~t~l~~a~~~~~~~~v~ 293 (356)
+|+++|.+|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+..|+.++++
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999999999999 78888 999999999999 899999999999999999999999
Q ss_pred Hhhh
Q psy14202 294 YLLD 297 (356)
Q Consensus 294 ~Ll~ 297 (356)
+|++
T Consensus 239 ~Ll~ 242 (256)
T 2etb_A 239 HILQ 242 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9998
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=8.7e-33 Score=219.23 Aligned_cols=157 Identities=27% Similarity=0.319 Sum_probs=107.4
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 241 (356)
..||||.|+..|+.+++++|+++|++++.++..|.| ||+.|+. |+.+++++|+++|++++.++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t---------------~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~ 68 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRT---------------ALQVMKL-GNPEIARRLLLRGANPDLKDR 68 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCC---------------HHHHCCS-SCHHHHHHHHHTTCCTTCCCT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCcc---------------HHHHHHc-CcHHHHHHHHHcCCCCCCCCC
Confidence 346666666666666666666666666666665555 4444555 556666666666666666666
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCC-cccCCCCCCcHHHHHHh
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAM-IEHVDINGLRPLDRAIS 320 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~-~~~~~~~g~t~l~~A~~ 320 (356)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .+.+ ++..+..|.|||++|+.
T Consensus 69 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 69 TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK--HTASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--HSCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--ccCCCCCCcCCCCCcHHHHHHH
Confidence 67777777777777777777777777777777777777777777777777777777 5555 56777777777777777
Q ss_pred CCCHHHHHHHHHcCCC
Q psy14202 321 CRNVPVVQCFLRKGAK 336 (356)
Q Consensus 321 ~~~~~i~~~Ll~~ga~ 336 (356)
.++.+++++|+++|||
T Consensus 147 ~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 147 YGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTCHHHHHHHHHTC--
T ss_pred cCCHHHHHHHHHhCCC
Confidence 7777777777777765
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=3.5e-32 Score=217.32 Aligned_cols=153 Identities=33% Similarity=0.456 Sum_probs=88.6
Q ss_pred chHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q psy14202 130 APALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ 209 (356)
Q Consensus 130 ~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~ 209 (356)
.++|+.|+..|+.+++++|+++|.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------------ 82 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMT------------ 82 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC------------
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC------------
Confidence 35566666666666666666666666666666666666666666666666666666655555555544
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRI 289 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 289 (356)
|||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..|+.
T Consensus 83 ---~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 83 ---PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ---HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHhhh
Q psy14202 290 QAVTYLLD 297 (356)
Q Consensus 290 ~~v~~Ll~ 297 (356)
+++++|++
T Consensus 160 ~~~~~L~~ 167 (169)
T 2y1l_E 160 DLAEILQK 167 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 55555554
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2e-33 Score=242.34 Aligned_cols=221 Identities=23% Similarity=0.227 Sum_probs=170.2
Q ss_pred ChhhhhhhhhhhcCCCHHHHHHHHH----CCCCcccc--ccccCCchHHHHHHHc---CCHHHHHHHHhCCCCC------
Q psy14202 91 SPAQALCSLRNVYSPNVKVSRLLLL----SGADANHI--TEFLGAAPALCLFAHE---GNSEMIALLLEFHACI------ 155 (356)
Q Consensus 91 ~~~~~~~~~~a~~~~~~~~~~~ll~----~g~~~~~~--~~~~~~~~~l~~A~~~---g~~~~v~~Ll~~~~~~------ 155 (356)
+....+.++.|+..|+.++++.|++ .+.+++.. .....+.||||+|+.. |+.+++++|++.|+++
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 3456678889999999998888876 56665432 1233688999999987 9999999999987642
Q ss_pred -C----ccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHH
Q psy14202 156 -D----LANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLL 230 (356)
Q Consensus 156 -~----~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 230 (356)
+ ..+..|.||||+|+..|+.++|++|+++|++++.++..+..... ........|.||||+|+..|+.+++++|+
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~-~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKT-KGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSC-SSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccc-cccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 2 25678999999999999999999999999999998862100000 00000012345888999999999999999
Q ss_pred h---cCCCCCCCCCCCCcHHHHHHHcCc---------HHHHHHHHHCCCCCc-------cCCCCCCcHHHHHHHcCCHHH
Q psy14202 231 Q---HHAPLDQTDGSHKTPLMIAAQEGH---------VGLLELLLDKGADIL-------REDGEGLTALSWACMRGRIQA 291 (356)
Q Consensus 231 ~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~a~~~~~~~~ 291 (356)
+ +|++++.+|..|.||||+|+..|+ .+++++|+++|++++ .+|..|.||||+|++.|+.++
T Consensus 169 ~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 169 QNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHH
Confidence 9 999999999999999999999888 899999999999986 489999999999999999999
Q ss_pred HHHhhhcCCCC-CcccCCCCCCcH
Q psy14202 292 VTYLLDRDRGA-MIEHVDINGLRP 314 (356)
Q Consensus 292 v~~Ll~~~~~~-~~~~~~~~g~t~ 314 (356)
+++|++ .|+ +.......+.+|
T Consensus 249 v~~Ll~--~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 249 LAYILQ--REIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHHH--HHTC------------
T ss_pred HHHHHH--CCCCCchhhhhhhhhc
Confidence 999999 666 666666555554
No 59
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.4e-32 Score=217.83 Aligned_cols=159 Identities=26% Similarity=0.310 Sum_probs=107.2
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 161 QGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 161 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
.|.||||.|+..|+.+++++|++.|.+++.++..|.| ||++|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFT---------------PLMWAAAHGQIAVVEFLLQNGADPQLLG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCC---------------HHHHHHHCCCHHHHHHHHHcCCCCCCcC
Confidence 3566666666666666666666666666666666655 4555555666666666666666666666
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHh
Q psy14202 241 GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAIS 320 (356)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~ 320 (356)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++..|..|.||+++|+.
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~l~~A~~ 144 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE--SGADPTIETDSGYNSMDLAVA 144 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHH
Confidence 666677777777777777777777777776666667777777777777777777776 666666666677777777777
Q ss_pred CCCHHHHHHHHHcCCC
Q psy14202 321 CRNVPVVQCFLRKGAK 336 (356)
Q Consensus 321 ~~~~~i~~~Ll~~ga~ 336 (356)
.|+.+++++|++++++
T Consensus 145 ~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 145 LGYRSVQQVIESHLLK 160 (167)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHH
Confidence 7777777777666543
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.8e-31 Score=213.19 Aligned_cols=159 Identities=35% Similarity=0.452 Sum_probs=150.4
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC
Q psy14202 159 NSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQ 238 (356)
Q Consensus 159 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~ 238 (356)
...+.++|+.|++.|+.++|++|+++|++++.++..|.| |||.|+..|+.+++++|+++|++++.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~ 75 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWT---------------PLHLAAFNGHLEIVEVLLKNGADVNA 75 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 345678999999999999999999999999999999887 77788888999999999999999999
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHH
Q psy14202 239 TDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRA 318 (356)
Q Consensus 239 ~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A 318 (356)
++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .+++++.+|..|.|||++|
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~~~~~~~~g~t~l~~A 153 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLK--NGADVNAQDKFGKTAFDIS 153 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HhCCCHHHHHHHHHcC
Q psy14202 319 ISCRNVPVVQCFLRKG 334 (356)
Q Consensus 319 ~~~~~~~i~~~Ll~~g 334 (356)
+..++.+++++|++.|
T Consensus 154 ~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 154 IDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCHHHHHHHHTC-
T ss_pred HHhCCHHHHHHHHHcC
Confidence 9999999999999987
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.7e-31 Score=212.86 Aligned_cols=155 Identities=25% Similarity=0.315 Sum_probs=149.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
.+.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------- 71 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRES---------- 71 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC----------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCc----------
Confidence 4568899999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
|||.|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..|
T Consensus 72 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 72 -----ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred -----HHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhh
Q psy14202 288 RIQAVTYLLD 297 (356)
Q Consensus 288 ~~~~v~~Ll~ 297 (356)
+.+++++|++
T Consensus 147 ~~~~~~~L~~ 156 (167)
T 3v31_A 147 YRSVQQVIES 156 (167)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999999997
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.3e-31 Score=212.53 Aligned_cols=157 Identities=29% Similarity=0.384 Sum_probs=148.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q psy14202 129 AAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHL 208 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~ 208 (356)
..++|+.|+..|+.+++++|++.|.+++..+..|.||||+|+. |+.+++++|+++|++++.++..|.|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t----------- 72 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFA----------- 72 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCC-----------
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCC-----------
Confidence 4588999999999999999999999999999999999999999 9999999999999999999999887
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC-CccCCCCCCcHHHHHHHcC
Q psy14202 209 QNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGAD-ILREDGEGLTALSWACMRG 287 (356)
Q Consensus 209 ~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~a~~~~ 287 (356)
|||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|
T Consensus 73 ----~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 73 ----VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp ----HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred ----HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 77788888999999999999999999999999999999999999999999999998 5999999999999999999
Q ss_pred CHHHHHHhhhcCCCCC
Q psy14202 288 RIQAVTYLLDRDRGAM 303 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~ 303 (356)
+.+++++|++ .|++
T Consensus 149 ~~~~~~~Ll~--~GAd 162 (162)
T 1ihb_A 149 RNEVVSLMQA--NGAG 162 (162)
T ss_dssp CHHHHHHHHH--TC--
T ss_pred CHHHHHHHHH--hCCC
Confidence 9999999998 6654
No 63
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.1e-31 Score=218.97 Aligned_cols=155 Identities=26% Similarity=0.350 Sum_probs=150.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
.+.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------- 103 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT---------- 103 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc----------
Confidence 6789999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
|||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..|
T Consensus 104 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 104 -----PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred -----HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC
Confidence 677888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhh
Q psy14202 288 RIQAVTYLLD 297 (356)
Q Consensus 288 ~~~~v~~Ll~ 297 (356)
+.+++++|++
T Consensus 179 ~~~~v~~Ll~ 188 (192)
T 2rfm_A 179 RQEVIKIFTE 188 (192)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 9999999997
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.8e-32 Score=233.42 Aligned_cols=193 Identities=21% Similarity=0.191 Sum_probs=168.7
Q ss_pred hhhhhhhhcCCCHH----HHHHHHHCCCCccccccc--cCCchHHHHHH---HcCCHHHHHHHHhCCCC-----------
Q psy14202 95 ALCSLRNVYSPNVK----VSRLLLLSGADANHITEF--LGAAPALCLFA---HEGNSEMIALLLEFHAC----------- 154 (356)
Q Consensus 95 ~~~~~~a~~~~~~~----~~~~ll~~g~~~~~~~~~--~~~~~~l~~A~---~~g~~~~v~~Ll~~~~~----------- 154 (356)
.+.++.|+..|+.+ ++++|++.|.+++..+.. ..+.||||+|+ ..|+.+++++|++.|++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 45678899999999 455566699999877632 46889999999 77999999999998743
Q ss_pred CCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCCCCChHHHHHHHc
Q psy14202 155 IDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTD--------------TTGRCALVHAARGGHLQNLSPLMLAVKE 220 (356)
Q Consensus 155 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~l~~a~~~ 220 (356)
++..|..|.||||+|+..|+.++|++|+++|++++.++ ..|.| |||+|+..
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~t---------------pL~~A~~~ 150 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGEL---------------PLSLAACT 150 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSS---------------HHHHHHHT
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCC---------------HHHHHHHc
Confidence 45556689999999999999999999999999999988 35555 88888999
Q ss_pred CCHHHHHHHHh---cCCCCCCCCCCCCcHHHHHHHcCc---------HHHHHHHHHCCCCC-------ccCCCCCCcHHH
Q psy14202 221 GHWATAEKLLQ---HHAPLDQTDGSHKTPLMIAAQEGH---------VGLLELLLDKGADI-------LREDGEGLTALS 281 (356)
Q Consensus 221 ~~~~~~~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~g~~~-------~~~~~~g~t~l~ 281 (356)
|+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|+++|+++ +.+|..|.||||
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 99999999999 999999999999999999998887 79999999999998 679999999999
Q ss_pred HHHHcCCHHHHHHhhhcCCCCCc
Q psy14202 282 WACMRGRIQAVTYLLDRDRGAMI 304 (356)
Q Consensus 282 ~a~~~~~~~~v~~Ll~~~~~~~~ 304 (356)
+|++.|+.+++++|++ ++.+.
T Consensus 231 ~A~~~g~~~~v~~Ll~--~g~~~ 251 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIR--REIAD 251 (260)
T ss_dssp HHHHTTCHHHHHHHHH--HHHHH
T ss_pred HHHHcCCHHHHHHHHH--hCCCc
Confidence 9999999999999998 45443
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.98 E-value=3.5e-35 Score=246.20 Aligned_cols=202 Identities=19% Similarity=0.075 Sum_probs=172.8
Q ss_pred HHHHHHCCCCcccccc-ccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q psy14202 110 SRLLLLSGADANHITE-FLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASL 188 (356)
Q Consensus 110 ~~~ll~~g~~~~~~~~-~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~ 188 (356)
++.|+++|++++..+. ...+.|+|+.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.++|++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 4678889988876553 335668999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHH--HHcCcHHHHHHHHHC
Q psy14202 189 GRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD-GSHKTPLMIA--AQEGHVGLLELLLDK 265 (356)
Q Consensus 189 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~a--~~~~~~~~v~~Ll~~ 265 (356)
+.+|..|.| |||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..|+.+++++|+++
T Consensus 81 n~~d~~g~t---------------pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 81 NSPDSHGWT---------------PLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp TCCCTTCCC---------------HHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred CCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 999999987 7778888899999999999999999987 5999999999 999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCC--cccCCCCCCcHHHHHHhCCCHHHHHHHH
Q psy14202 266 GADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAM--IEHVDINGLRPLDRAISCRNVPVVQCFL 331 (356)
Q Consensus 266 g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~--~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 331 (356)
|++++..+..|.||++.++..+. .++|++ .|++ ++.+|..|.|||++|+..|+.++++.++
T Consensus 146 ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~--~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 146 EQSMGLMNSGAVYALWDYSAEFG---DELSFR--EGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HHHTTTSGGGEEEESSCBCCSST---TBCCBC--TTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred CCCcccccCCchHHHHHHhhccc---cccCcc--ccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 99999999999999986554443 357777 6777 7789999999999999999999887643
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=9.8e-32 Score=215.37 Aligned_cols=161 Identities=25% Similarity=0.310 Sum_probs=151.5
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGAS-LGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
+.+|||.|+..|+.+++++|++.|.+ ++.++..|.| |||+|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 66 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFT---------------PLIWASAFGEIETVRFLLEWGADPHILA 66 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCchhhc
Confidence 46899999999999999999999877 7888888887 7888888899999999999999999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHh
Q psy14202 241 GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAIS 320 (356)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~ 320 (356)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~ 144 (172)
T 3v30_A 67 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA--RGADLTTEADSGYTPMDLAVA 144 (172)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CCCHHHHHHHHHcCCCCCh
Q psy14202 321 CRNVPVVQCFLRKGAKLGP 339 (356)
Q Consensus 321 ~~~~~i~~~Ll~~ga~~~~ 339 (356)
.++.+++++|+++|+++..
T Consensus 145 ~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 145 LGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp HTCHHHHHHHHHHHHHHSC
T ss_pred hCcHHHHHHHHHHHHHHhc
Confidence 9999999999999987653
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.3e-31 Score=216.02 Aligned_cols=163 Identities=26% Similarity=0.352 Sum_probs=104.1
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q psy14202 161 QGRTPLSLAAGRGHMEAVRTLVAA-GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQT 239 (356)
Q Consensus 161 ~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 239 (356)
.+.++|+.|+..|+.++|++|++. +.+++.++..|.| |||.|+..|+.+++++|+++|++++.+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 68 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFS---------------PLHWACREGRSAVVEMLIMRGARINVM 68 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCC---------------HHHHHHHcCcHHHHHHHHHcCCCCCCc
Confidence 345666666666666666666665 4455555555554 455555555666666666666666666
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHH
Q psy14202 240 DGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAI 319 (356)
Q Consensus 240 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~ 319 (356)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++..|..|.||+++|+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 69 NRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVA--NGALVSICNKYGEMPVDKAK 146 (179)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCSSBCCTTSCCGGGGSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH--CCCCcchhccCCCCcHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666 56666666666666666666
Q ss_pred hCCCHHHHHHHHHcCCCCChh
Q psy14202 320 SCRNVPVVQCFLRKGAKLGPT 340 (356)
Q Consensus 320 ~~~~~~i~~~Ll~~ga~~~~~ 340 (356)
..++.+++++|+++|++++..
T Consensus 147 ~~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 147 APLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HHHHHHHHHHHHHTTCCCSCB
T ss_pred HHHHHHHHHHHHHhhcCcccC
Confidence 666666666666666666543
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=9.1e-31 Score=205.55 Aligned_cols=149 Identities=30% Similarity=0.375 Sum_probs=93.6
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCC
Q psy14202 131 PALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQN 210 (356)
Q Consensus 131 ~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~ 210 (356)
++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------------- 69 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRT------------- 69 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCC-------------
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-------------
Confidence 45666666666666666666666554 3556666666666666666666666666666666655554
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHH
Q psy14202 211 LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQ 290 (356)
Q Consensus 211 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 290 (356)
|||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..|+.+
T Consensus 70 --~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 70 --PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp --HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred --HHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 455555555666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHh
Q psy14202 291 AVTYL 295 (356)
Q Consensus 291 ~v~~L 295 (356)
++++|
T Consensus 148 i~~~L 152 (153)
T 1awc_B 148 LAEIL 152 (153)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=7.1e-31 Score=206.19 Aligned_cols=151 Identities=34% Similarity=0.448 Sum_probs=143.2
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 241 (356)
..+||+.|++.|+.+++++|+++|++++ .+..|.| |||.|+..|+.+++++|+++|++++.++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTS---------------PLHLAAQYGHFSTTEVLLRAGVSRDARTK 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCC---------------HHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 3589999999999999999999999876 4666766 78888889999999999999999999999
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhC
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~ 321 (356)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..
T Consensus 66 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK--YGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred CCHHHHHHH
Q psy14202 322 RNVPVVQCF 330 (356)
Q Consensus 322 ~~~~i~~~L 330 (356)
|+.+++++|
T Consensus 144 ~~~~i~~~L 152 (153)
T 1awc_B 144 GNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999987
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=9.9e-32 Score=231.87 Aligned_cols=183 Identities=27% Similarity=0.327 Sum_probs=167.5
Q ss_pred hhhhcCCCHHHHHHHHHCCCC--ccccccccCCchHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCCcHHHHHH-----
Q psy14202 99 LRNVYSPNVKVSRLLLLSGAD--ANHITEFLGAAPALCLFAHEGNSEMIALLLEFHA-CIDLANSQGRTPLSLAA----- 170 (356)
Q Consensus 99 ~~a~~~~~~~~~~~ll~~g~~--~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~----- 170 (356)
..++..++.+.++.++..+.+ +|..+. .+.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~d~--~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~ 158 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIADS--NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLK 158 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhh
Confidence 446677788888888877666 555554 68899999999999999999999998 89999999999999999
Q ss_pred HCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy14202 171 GRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIA 250 (356)
Q Consensus 171 ~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a 250 (356)
..++.+++++|++.|.+.+..+..|.| |||+|+..|+.+++++|+++|+++|.+|..|.||||+|
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------------pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 159 TQDDIETVLQLFRLGNINAKASQAGQT---------------ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223 (276)
T ss_dssp SHHHHHHHHHHHHHSCTTCCCTTTCCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred hhhhHHHHHHHHHcCCCccccCCCCCC---------------HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 668999999999999999888888887 78888888999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhc
Q psy14202 251 AQEGHVGLLELLLD-KGADILREDGEGLTALSWACMRGRIQAVTYLLDR 298 (356)
Q Consensus 251 ~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 298 (356)
+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 224 ~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999 8999999999999999999999999999999984
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2.4e-31 Score=211.61 Aligned_cols=159 Identities=27% Similarity=0.311 Sum_probs=102.5
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy14202 159 NSQGRTPLSLAAGRGHMEAVRTLVAA-GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLD 237 (356)
Q Consensus 159 ~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~ 237 (356)
+..|.+||+.|++.|+.+++++|++. +.+++..+..|.| |||.|+..|+.+++++|+++|++++
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~ 69 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQST---------------PLHFAAGYNRVSVVEYLLQHGADVH 69 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCC---------------HHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCC---------------HHHHHHHcChHHHHHHHHhcCCCCC
Confidence 34455666666666666666666653 3444455555544 4555555566666666666666666
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHH
Q psy14202 238 QTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDR 317 (356)
Q Consensus 238 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~ 317 (356)
.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~l~~ 147 (165)
T 3twr_A 70 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ--HGADPTKKNRDGNTPLDL 147 (165)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCTGGG
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCcccCCCCCChhHh
Confidence 666666677777777777777777777777777777777777777777777777777776 667777777777777777
Q ss_pred HHhCCCHHHHHHHHHcCC
Q psy14202 318 AISCRNVPVVQCFLRKGA 335 (356)
Q Consensus 318 A~~~~~~~i~~~Ll~~ga 335 (356)
|+. ++.+++++|+++||
T Consensus 148 a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 148 VKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp SCT-TCHHHHHHHHTC--
T ss_pred Hhc-CChHHHHHHhhccc
Confidence 554 66677777777664
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=8.7e-31 Score=211.25 Aligned_cols=166 Identities=22% Similarity=0.253 Sum_probs=154.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 129 AAPALCLFAHEGNSEMIALLLEF-HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 129 ~~~~l~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
..++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------- 74 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT---------- 74 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC----------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC----------
Confidence 44669999999999999999998 5678999999999999999999999999999999999999998887
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRG 287 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 287 (356)
|||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+
T Consensus 75 -----~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 75 -----PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp -----HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH
T ss_pred -----HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH
Confidence 777888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhcCCCCCcccCCCCC
Q psy14202 288 RIQAVTYLLDRDRGAMIEHVDING 311 (356)
Q Consensus 288 ~~~~v~~Ll~~~~~~~~~~~~~~g 311 (356)
+.+++++|++ .+++++..+..+
T Consensus 150 ~~~~~~~L~~--~g~~~~~~~~~~ 171 (179)
T 3f6q_A 150 RELLRERAEK--MGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHHHH--TTCCCSCBCCCC
T ss_pred HHHHHHHHHH--hhcCcccCCccc
Confidence 9999999999 899988766554
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=2.4e-30 Score=203.83 Aligned_cols=149 Identities=31% Similarity=0.410 Sum_probs=72.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q psy14202 131 PALCLFAHEGNSEMIALLLEF-HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ 209 (356)
Q Consensus 131 ~~l~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~ 209 (356)
++|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.++..|.|
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t------------ 70 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTS------------ 70 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCC------------
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCC------------
Confidence 445555555555555555544 22444455555555555 5555555555555555555444444443
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRI 289 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 289 (356)
|||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+.
T Consensus 71 ---~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 71 ---PVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCH
T ss_pred ---HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcH
Confidence 34444444444444444444444444444444444444444444444444444 44444444444444444444444
Q ss_pred HHHHHhh
Q psy14202 290 QAVTYLL 296 (356)
Q Consensus 290 ~~v~~Ll 296 (356)
+++++|+
T Consensus 147 ~~v~~Ll 153 (156)
T 1bd8_A 147 DLVDILQ 153 (156)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1e-29 Score=200.13 Aligned_cols=153 Identities=27% Similarity=0.375 Sum_probs=144.5
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAA-GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
+.|||+.|+..|+.+++++|++. +.+++..+..|.| |||. +..|+.+++++|+++|++++.++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t---------------~L~~-~~~~~~~~v~~Ll~~g~~~~~~~ 65 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT---------------ALQV-MMFGSTAIALELLKQGASPNVQD 65 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCC---------------HHHH-SCTTCHHHHHHHHHTTCCTTCCC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCc---------------HHHH-HHcCCHHHHHHHHHCCCCCCCcC
Confidence 46899999999999999999998 4589999999987 6667 77888999999999999999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHh
Q psy14202 241 GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAIS 320 (356)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~ 320 (356)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ . ++++..|..|.|||++|+.
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~-~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA--E-SDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT--T-SCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh--c-cCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 5 8999999999999999999
Q ss_pred CCCHHHHHHHHHc
Q psy14202 321 CRNVPVVQCFLRK 333 (356)
Q Consensus 321 ~~~~~i~~~Ll~~ 333 (356)
.|+.+++++|+++
T Consensus 143 ~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 143 RGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHhh
Confidence 9999999999975
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=6.2e-30 Score=203.41 Aligned_cols=154 Identities=30% Similarity=0.356 Sum_probs=144.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEF-HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~ 206 (356)
.+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t--------- 77 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLV--------- 77 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC---------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCC---------
Confidence 345889999999999999999984 5667888889999999999999999999999999999999999887
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMR 286 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 286 (356)
|||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+.
T Consensus 78 ------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~- 150 (165)
T 3twr_A 78 ------PLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD- 150 (165)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-
T ss_pred ------HHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-
Confidence 6778888899999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHhhh
Q psy14202 287 GRIQAVTYLLD 297 (356)
Q Consensus 287 ~~~~~v~~Ll~ 297 (356)
|+.+++++|++
T Consensus 151 ~~~~i~~~L~~ 161 (165)
T 3twr_A 151 GDTDIQDLLRG 161 (165)
T ss_dssp TCHHHHHHHHT
T ss_pred CChHHHHHHhh
Confidence 89999999997
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.6e-30 Score=218.28 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=114.4
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q psy14202 160 SQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQT 239 (356)
Q Consensus 160 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 239 (356)
..|.||||.|++.|+.++++.|+++|++++.. ..+. |||+.|+..|+.+++++|++.|++++.+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~---------------t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 66 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPL---------------ALLLDSSLEGEFDLVQRIIYEVDDPSLP 66 (239)
T ss_dssp -----------------------------------CH---------------HHHHHHHHHTCHHHHHHHTSTTSSCCCC
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhh---------------HHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 46889999999999999999999999888643 3333 4788888889999999999999999999
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCC-cHHHHH
Q psy14202 240 DGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGL-RPLDRA 318 (356)
Q Consensus 240 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~-t~l~~A 318 (356)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++..+..|. |||++|
T Consensus 67 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 67 NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE--SGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCSSSCCCHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCcceecCCCCcchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 8899998887777 999998
Q ss_pred --HhCCCHHHHHHHHHcCCCCCh
Q psy14202 319 --ISCRNVPVVQCFLRKGAKLGP 339 (356)
Q Consensus 319 --~~~~~~~i~~~Ll~~ga~~~~ 339 (356)
+..|+.+++++|+++|++++.
T Consensus 145 ~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 145 EEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp CSSSTTCCCHHHHHHHHHHHTTT
T ss_pred HHhhhccHHHHHHHHHhhhcccc
Confidence 778889999999999988764
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.5e-31 Score=221.28 Aligned_cols=189 Identities=15% Similarity=0.123 Sum_probs=134.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
.+.|||+.|+..++.+.++.|+++|++++.. ..|.||||.|+..|+.++|++|++.|++++.+|..|.|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t---------- 72 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGIT---------- 72 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCC----------
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC----------
Confidence 5678899999999999999999999998754 67889999999999999999999999999999988887
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCC-cHHHHH--H
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGL-TALSWA--C 284 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~a--~ 284 (356)
|||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+| +
T Consensus 73 -----~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 73 -----ALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp -----HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSS
T ss_pred -----HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHh
Confidence 67778888889999999999999999999999999999999999999999999999999988877 999999 7
Q ss_pred HcCCHHHHHHhhhcCCCCCcccC---------CCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 285 MRGRIQAVTYLLDRDRGAMIEHV---------DINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 285 ~~~~~~~v~~Ll~~~~~~~~~~~---------~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
..|+.+++++|++ .+++++.. +..+.++++++...|. +++.|.+.+.+
T Consensus 148 ~~g~~~~~~~Ll~--~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~ 204 (239)
T 1ycs_B 148 EEGYTQCSQFLYG--VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDED 204 (239)
T ss_dssp STTCCCHHHHHHH--HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTS
T ss_pred hhccHHHHHHHHH--hhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCC
Confidence 7889999999998 67666654 6668888888877775 45555554443
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2e-31 Score=223.36 Aligned_cols=190 Identities=19% Similarity=0.188 Sum_probs=162.2
Q ss_pred HHHHHhCCCCCCcc---CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcC
Q psy14202 145 IALLLEFHACIDLA---NSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEG 221 (356)
Q Consensus 145 v~~Ll~~~~~~~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~ 221 (356)
++.|++.|.+++.. +..+.||||+|+..|+.++|++|++.|++++.+|..|.| |||+|+..|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t---------------pLh~A~~~g 65 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGIT---------------ALHNAICGA 65 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCC---------------HHHHHHHTT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC---------------HHHHHHHcC
Confidence 46788888886654 456678899999999999999999999999999999987 778888889
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCC-CCCCcHHHHH--HHcCCHHHHHHhhhc
Q psy14202 222 HWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRED-GEGLTALSWA--CMRGRIQAVTYLLDR 298 (356)
Q Consensus 222 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a--~~~~~~~~v~~Ll~~ 298 (356)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+| +..|+.+++++|++
T Consensus 66 ~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~- 144 (229)
T 2vge_A 66 NYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD- 144 (229)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999986 6999999999 99999999999999
Q ss_pred CCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC----------hhHHHHhhCCcceecc
Q psy14202 299 DRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG----------PTTWSMAAGKPEVMEN 354 (356)
Q Consensus 299 ~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~----------~~~~a~~~~~~~~~~~ 354 (356)
.|++++..|..|.||++.++.... .++|++.|++++ +..+|+..|+.++|+.
T Consensus 145 -~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 145 -VEQSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp -HHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred -cCCCcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 899999999999999986555543 367889999842 6678999999999974
No 79
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=4.2e-32 Score=242.57 Aligned_cols=236 Identities=12% Similarity=0.069 Sum_probs=144.2
Q ss_pred hhhhhhhhhhhcCCCHHHHHHHHHCCCCcccc-ccccCCchHHHHHHHcCCHHHHHHHHhCCCCC---CccCCCCCcHHH
Q psy14202 92 PAQALCSLRNVYSPNVKVSRLLLLSGADANHI-TEFLGAAPALCLFAHEGNSEMIALLLEFHACI---DLANSQGRTPLS 167 (356)
Q Consensus 92 ~~~~~~~~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~ 167 (356)
....+.++.|+..|+.+++++|++.|+..... .....+.||||+|+..|+.++|++|+++|+++ +..+.+ .||||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 34457778888888888888888887622111 00112346788888888888888888888642 222222 78888
Q ss_pred HHHHCCCHHHHHHHHHcCCCCCC--CCCCCCcHHHHHHHcCCCCCChHHHHHH-HcCCHHHHHHHHhcCCCCCCCCCCCC
Q psy14202 168 LAAGRGHMEAVRTLVAAGASLGR--TDTTGRCALVHAARGGHLQNLSPLMLAV-KEGHWATAEKLLQHHAPLDQTDGSHK 244 (356)
Q Consensus 168 ~A~~~g~~~iv~~Ll~~g~~~~~--~~~~~~t~l~~a~~~~~~~~~~~l~~a~-~~~~~~~~~~Ll~~g~~~~~~~~~g~ 244 (356)
+|+..|+.++|++|+++|++++. .+..|.| ||++|+ ..|+.+++++|+++|. .|.
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~T---------------pL~~Aa~~~G~~eiv~~Ll~~ga-------~~~ 226 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYY---------------AFRWAAVGRGHHNVINFLLDCPV-------MLA 226 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHH---------------HHHHHHSTTCCHHHHHHHTTSHH-------HHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCC---------------HHHHHHHHCCCHHHHHHHHhCCC-------ccc
Confidence 88888888888888888877655 5555544 788888 8888888888887663 267
Q ss_pred cHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHH------------HHHhhhcC-------------
Q psy14202 245 TPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQA------------VTYLLDRD------------- 299 (356)
Q Consensus 245 t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~------------v~~Ll~~~------------- 299 (356)
|||+.|+..|+.+++++|+++|++++..+ ++++.|+.+|+.++ ++.|+...
T Consensus 227 taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~ 302 (376)
T 2aja_A 227 YAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 302 (376)
T ss_dssp HHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHT
T ss_pred hHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHh
Confidence 88888888888888888888887776554 35667777776542 22222210
Q ss_pred CC-C----CcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC-----CChhHHHHhhCCcceecc
Q psy14202 300 RG-A----MIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK-----LGPTTWSMAAGKPEVMEN 354 (356)
Q Consensus 300 ~~-~----~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~-----~~~~~~a~~~~~~~~~~~ 354 (356)
.+ . ........+.|||++|+..|+.+++++|++.|.- -++..+|-.+|+.++++.
T Consensus 303 ~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 303 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANNYYINETGGRLDLRAV 367 (376)
T ss_dssp STTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHHHHHSCC------------------
T ss_pred ChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChHHHHHHHHhccccccccccccHHHH
Confidence 00 0 0112223456789999999999999999988642 235567777888877653
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.5e-28 Score=188.84 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy14202 185 GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLD 264 (356)
Q Consensus 185 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 264 (356)
+++++.++..|.| ||+.|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|++
T Consensus 2 ~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~ 65 (136)
T 1d9s_A 2 SPGIHMLGGSSDA---------------GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLL 65 (136)
T ss_dssp CCCCSCCCCCCSC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHH
T ss_pred CCCccCCCCCCcc---------------HHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHH
Confidence 4677888888877 7888889999999999999999999999999999999999 99999999999
Q ss_pred CCCCCccCCCC-CCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 265 KGADILREDGE-GLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 265 ~g~~~~~~~~~-g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+|++++.++.. |.||||+|+..|+.+++++|++ .+++++.+|..|.|||++|+..++.+++++|+++|||
T Consensus 66 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 66 HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHR--AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHH--TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999 9999999999999999999999 8999999999999999999999999999999999986
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=5e-28 Score=185.94 Aligned_cols=130 Identities=30% Similarity=0.363 Sum_probs=109.0
Q ss_pred CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHh
Q psy14202 152 HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQ 231 (356)
Q Consensus 152 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 231 (356)
+++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.| |||+|+. ++.+++++|++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~-~~~~~v~~Ll~ 65 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRR---------------PIQVMMM-GSAQVAELLLL 65 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCT---------------TTTTSTT-SCHHHHHHHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCC---------------HHHHHHc-CCHHHHHHHHH
Confidence 4567778888888888888888888888888888888888877776 5667777 78888888888
Q ss_pred cCCCCCCCCCC-CCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 232 HHAPLDQTDGS-HKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 232 ~g~~~~~~~~~-g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
+|++++.++.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++
T Consensus 66 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 66 HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp HTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 88888888888 8888888888888888888888888888888888888888888888888888887
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3e-28 Score=191.80 Aligned_cols=144 Identities=27% Similarity=0.302 Sum_probs=97.5
Q ss_pred ccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q psy14202 157 LANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPL 236 (356)
Q Consensus 157 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~ 236 (356)
..+..|.||||+|+..|+.++|++|+++|++++.++..|.| |||+|+ .|+.+++++|+++|+++
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~-~~~~~~v~~Ll~~g~~~ 70 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRR---------------PIQVMM-MGSARVAELLLLHGAEP 70 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCC---------------TTTSSC-TTCHHHHHHHHTTTCCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC---------------HHHHHH-cCCHHHHHHHHHcCCCC
Confidence 34566778888888888888888888888777777777776 455553 66778888888888888
Q ss_pred CCCCCCCCc-HHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHH
Q psy14202 237 DQTDGSHKT-PLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPL 315 (356)
Q Consensus 237 ~~~~~~g~t-~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l 315 (356)
+.++..|.| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++..+..|.||.
T Consensus 71 ~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~t~~ 148 (156)
T 1bi7_B 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA--AAGGTRGSNHARIDAA 148 (156)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS--CC--------------
T ss_pred CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHH--cCCCCCccCcCcCccc
Confidence 888877887 8888888888888888888888888888888888888888888888888887 7888888888887776
Q ss_pred HHH
Q psy14202 316 DRA 318 (356)
Q Consensus 316 ~~A 318 (356)
+.+
T Consensus 149 ~~~ 151 (156)
T 1bi7_B 149 EGP 151 (156)
T ss_dssp ---
T ss_pred ccC
Confidence 643
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=6.9e-28 Score=189.69 Aligned_cols=141 Identities=25% Similarity=0.253 Sum_probs=117.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 207 (356)
.+.|+||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++.++..|.|
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~t---------- 79 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLT---------- 79 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCC----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCc----------
Confidence 5678999999999999999999999999999999999999985 99999999999999999999998886
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy14202 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWA 283 (356)
Q Consensus 208 ~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 283 (356)
||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus 80 ----tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 80 ----RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp ----CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred ----HHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 367778888999999999999999999999999999999999999999999999999999999999988754
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=2.9e-31 Score=237.10 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=174.0
Q ss_pred hhhhhhc-CCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCC---CCccCCCCCcHHHHHHHC
Q psy14202 97 CSLRNVY-SPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHAC---IDLANSQGRTPLSLAAGR 172 (356)
Q Consensus 97 ~~~~a~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~ 172 (356)
++..+.. .++++++++++++|.+. .||||+|+..|+.+++++|++.|.. .+..+..|.||||+|+..
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~---------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS---------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH---------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc---------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 3344444 57889999999988664 3889999999999999999999873 223456788999999999
Q ss_pred CCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCcHH
Q psy14202 173 GHMEAVRTLVAAGASL---GRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQ--TDGSHKTPL 247 (356)
Q Consensus 173 g~~~iv~~Ll~~g~~~---~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~l 247 (356)
|+.++|++|+++|+++ +..+.+ . ||||.|+..|+.+++++|+++|++++. .+..|.|||
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~---------------TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL 202 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-Y---------------HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAF 202 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-H---------------HHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-C---------------CHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHH
Confidence 9999999999999753 222222 3 489999999999999999999999887 788899999
Q ss_pred HHHH-HcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCC---
Q psy14202 248 MIAA-QEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRN--- 323 (356)
Q Consensus 248 ~~a~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~--- 323 (356)
|+|+ ..|+.+++++|+++|++ |.|||++|+.+|+.+++++|++ .+++++..+. +++.|+..|+
T Consensus 203 ~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~--~ga~~~~~~~----~l~~A~~~g~~~v 269 (376)
T 2aja_A 203 RWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIAR--HVNRLKEMHD----AFKLSNPDGVFDL 269 (376)
T ss_dssp HHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHH--HHHHHHHHHT----TTTTTSSSSCCCC
T ss_pred HHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHh--cCcccccccH----HHHHHHHCCChhh
Confidence 9999 99999999999998743 7899999999999999999998 6766654432 3333333333
Q ss_pred ------------------------HHHHHHHHH---------cCCCCC----hhHHHHhhCCcceeccC
Q psy14202 324 ------------------------VPVVQCFLR---------KGAKLG----PTTWSMAAGKPEVMENF 355 (356)
Q Consensus 324 ------------------------~~i~~~Ll~---------~ga~~~----~~~~a~~~~~~~~~~~l 355 (356)
.+.+++|++ .|+++| +..+|+..|+.++|++|
T Consensus 270 v~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lL 338 (376)
T 2aja_A 270 VTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 338 (376)
T ss_dssp SSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHH
T ss_pred hcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHH
Confidence 445666665 466665 46899999999999987
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=2.1e-28 Score=197.83 Aligned_cols=156 Identities=18% Similarity=0.122 Sum_probs=127.7
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHCCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q psy14202 131 PALCLFAHEGNSEMIALLLEFHACIDLAN-SQGRTPLSLAAGRGHM----EAVRTLVAAGASLGRTDTTGRCALVHAARG 205 (356)
Q Consensus 131 ~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~ 205 (356)
++|+.|+..|+.+.++.+++.+. +..+ ..|+||||+|+..|+. +++++|+++|++++.++..|+||||+|+..
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 45999999999999999998774 3444 6799999999999975 589999999999999999999876666655
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHHcC-----cHHHHHHHHH-CCCCCccCCCCCCc
Q psy14202 206 GHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHK-TPLMIAAQEG-----HVGLLELLLD-KGADILREDGEGLT 278 (356)
Q Consensus 206 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~-t~l~~a~~~~-----~~~~v~~Ll~-~g~~~~~~~~~g~t 278 (356)
++.+. .+..+++++|+++|+++|.+|..|. ||||+|+..+ ..+++++|++ +|++++.+|..|.|
T Consensus 86 ~~~~~---------~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 86 GGNDI---------TGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp CTTCH---------HHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred CCcch---------hhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 43210 0125788999999999999998898 8999988843 4568888888 88999999999999
Q ss_pred HHHHHHHcCCHHHHHHhhh
Q psy14202 279 ALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 279 ~l~~a~~~~~~~~v~~Ll~ 297 (356)
|||+|++.|+.+++++|.+
T Consensus 157 pL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH
Confidence 9999998899888888886
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.2e-26 Score=175.50 Aligned_cols=125 Identities=36% Similarity=0.562 Sum_probs=121.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRI 289 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 289 (356)
|.|||+.|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCC
Q psy14202 290 QAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAK 336 (356)
Q Consensus 290 ~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 336 (356)
+++++|++ .+++++.+|..|.|||++|+..++.+++++|+++||+
T Consensus 82 ~~~~~Ll~--~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLE--AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHH--cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999 8999999999999999999999999999999999986
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=2.4e-26 Score=176.51 Aligned_cols=122 Identities=27% Similarity=0.388 Sum_probs=118.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHH
Q psy14202 211 LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQ 290 (356)
Q Consensus 211 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 290 (356)
.|||+.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLE 94 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q psy14202 291 AVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKG 334 (356)
Q Consensus 291 ~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 334 (356)
++++|++ .+++++..|..|.|||++|+..++.+++++|+++|
T Consensus 95 ~v~~Ll~--~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 95 IAEVLLK--HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHH--cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999 89999999999999999999999999999999987
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.4e-27 Score=192.99 Aligned_cols=156 Identities=17% Similarity=0.110 Sum_probs=137.1
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCCCCChHHHHHHHcCCH----HHHHHHHhcCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTD-TTGRCALVHAARGGHLQNLSPLMLAVKEGHW----ATAEKLLQHHAPL 236 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~----~~~~~Ll~~g~~~ 236 (356)
++++|+.|++.|+.+.++.++..+.+ ..+ ..|.| |||+|+..++. +++++|+++|+++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T---------------~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv 68 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSN---------------ILYDVLRNNNDEARYKISMFLINKGADI 68 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTT---------------HHHHHTTCSCHHHHHHHHHHHHHTTCCS
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCC---------------HHHHHHHcCCcchHHHHHHHHHHCCCCC
Confidence 56899999999999999999988753 344 55776 66666666654 5999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCc------HHHHHHHHHCCCCCccCCCCCC-cHHHHHHHcC-----CHHHHHHhhhcCCCCCc
Q psy14202 237 DQTDGSHKTPLMIAAQEGH------VGLLELLLDKGADILREDGEGL-TALSWACMRG-----RIQAVTYLLDRDRGAMI 304 (356)
Q Consensus 237 ~~~~~~g~t~l~~a~~~~~------~~~v~~Ll~~g~~~~~~~~~g~-t~l~~a~~~~-----~~~~v~~Ll~~~~~~~~ 304 (356)
|.++..|.||||+|+..++ .+++++|+++|++++.+|..|. ||||+|+..+ ..+++++|++. .|+++
T Consensus 69 n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-~gad~ 147 (186)
T 3t8k_A 69 KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-SGLQL 147 (186)
T ss_dssp SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-TTCCT
T ss_pred CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-cCCCC
Confidence 9999999999999999886 6889999999999999999999 9999999954 45799999974 79999
Q ss_pred ccCCCCCCcHHHHHHhCCCHHHHHHHHHcCC
Q psy14202 305 EHVDINGLRPLDRAISCRNVPVVQCFLRKGA 335 (356)
Q Consensus 305 ~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga 335 (356)
+.+|..|.|||++|++.++.+++++|.+...
T Consensus 148 ~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999997653
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=9e-26 Score=170.64 Aligned_cols=121 Identities=42% Similarity=0.703 Sum_probs=77.7
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 241 (356)
|.||||+|+..|+.+++++|+++|++++.++..|.| ||+.|+..++.+++++|+++|++++.++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 66 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---------------PLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCc---------------HHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 556666666666666666666666666666555554 45555555666666666666666666666
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
.|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..|+.+++++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 66666666666666666666666666666666666666666666666666666665
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.2e-25 Score=172.53 Aligned_cols=121 Identities=35% Similarity=0.425 Sum_probs=63.0
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 241 (356)
+.||||+|+..|+.+++++|+++|++++.+|..|.| |||.|+..++.+++++|+++|++++.++.
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 78 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLT---------------PLYLATAHGHLEIVEVLLKNGADVNAVDA 78 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCcCCC
Confidence 444555555555555555555555555544444443 34444444445555555555555555555
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555554
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2.5e-27 Score=191.66 Aligned_cols=139 Identities=27% Similarity=0.255 Sum_probs=96.4
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q psy14202 160 SQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQT 239 (356)
Q Consensus 160 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 239 (356)
..|.||||+|+..|+.+++++|++ |++++.+|..|.| |||+|+..|+.+++++|+++|++++.+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t---------------~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 105 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRT---------------ALLFVAGLGSDKCVRLLAEAGADLDHR 105 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCC---------------HHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCcC
Confidence 456677777777777777777776 7777777666665 555666666677777777777777766
Q ss_pred C-CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHH
Q psy14202 240 D-GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRA 318 (356)
Q Consensus 240 ~-~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A 318 (356)
+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++. ..+.++|++|
T Consensus 106 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a 166 (183)
T 3deo_A 106 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFG 166 (183)
T ss_dssp CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHH
T ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHH
Confidence 6 6677777777777777777777777777777777777777777652211 2345677777
Q ss_pred HhCCCHHHHHHHHHc
Q psy14202 319 ISCRNVPVVQCFLRK 333 (356)
Q Consensus 319 ~~~~~~~i~~~Ll~~ 333 (356)
+..|..+++++|.++
T Consensus 167 ~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 167 RRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHcCHHHHHHHHHHh
Confidence 777777777777654
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.8e-26 Score=175.59 Aligned_cols=135 Identities=27% Similarity=0.299 Sum_probs=119.0
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy14202 185 GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLD 264 (356)
Q Consensus 185 g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 264 (356)
|+++ .++..|.| |||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 1 G~d~-~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 64 (137)
T 3c5r_A 1 GIDP-FTNHRGET---------------LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ 64 (137)
T ss_dssp ---C-CCCTTCCC---------------HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCC-CcCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4566 56777776 7888888999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCC
Q psy14202 265 KGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKL 337 (356)
Q Consensus 265 ~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 337 (356)
+|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+..+..+++++|.+++...
T Consensus 65 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 65 HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLS--YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp TTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 999999999999999999999999999999999 89999999999999999999999999999998877543
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=4.9e-26 Score=175.00 Aligned_cols=130 Identities=28% Similarity=0.357 Sum_probs=108.4
Q ss_pred CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHh
Q psy14202 152 HACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQ 231 (356)
Q Consensus 152 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 231 (356)
|+|+ .++..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..++.+++++|++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~~~~Ll~ 64 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWT---------------PLHEACNHGHLKVVELLLQ 64 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC---------------HHHHHHHTTCHHHHHHHHH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC---------------HHHHHHHcCCHHHHHHHHH
Confidence 4555 56788889999999888999999999888888888888876 6777777888888999998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 232 HHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 232 ~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
+|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+
T Consensus 65 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 65 HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp TTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 888888888889999999999999999999999999999999999999999988888888877765
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.7e-25 Score=188.04 Aligned_cols=140 Identities=26% Similarity=0.251 Sum_probs=89.8
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 161 QGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 161 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
.|.||||+|+..|+.++|++|++ |++++.+|..|.| |||+|+..|+.+++++|+++|++++.++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t---------------~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 107 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRT---------------ALLFVAGLGSDKCVRLLAEAGADLDHRD 107 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCB---------------HHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCC---------------HHHHHHHCCCHHHHHHHHHcCCCCCcCC
Confidence 45566666666666666666666 6666666665555 4555555556666666666666666665
Q ss_pred -CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHH
Q psy14202 241 -GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAI 319 (356)
Q Consensus 241 -~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~ 319 (356)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.. .. ...+.|||++|+
T Consensus 108 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~---------~~----------~~~~~~~l~~a~ 168 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI---------LK----------TTPKGNPMQFGR 168 (244)
T ss_dssp SSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH---------HT----------TCCCSSHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH---------Hh----------ccCCCCHHHHHH
Confidence 5566777777777777777777777777777777777777777641 11 134567777777
Q ss_pred hCCCHHHHHHHHHcCC
Q psy14202 320 SCRNVPVVQCFLRKGA 335 (356)
Q Consensus 320 ~~~~~~i~~~Ll~~ga 335 (356)
..|+.+++++|++++.
T Consensus 169 ~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 169 RIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHHHHHHE
T ss_pred HcChHHHHHHHHHhcc
Confidence 7777777777776543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=188.69 Aligned_cols=141 Identities=23% Similarity=0.152 Sum_probs=117.1
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHcCCCCCChHHHHHHHc---CCHHHHHHHHh
Q psy14202 161 QGRTPLSLAAGRGHMEAVRTLVAAGASLGR------TDTTGRCALVHAARGGHLQNLSPLMLAVKE---GHWATAEKLLQ 231 (356)
Q Consensus 161 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~ 231 (356)
...++|+.|+..|+.+.|+.|++.|++++. .+..|.| |||+|+.. ++.+++++|++
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t---------------~Lh~A~~~~~~~~~~iv~~Ll~ 214 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEEL---------------VLHLAVKVANQASLPLVDFIIQ 214 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEEC---------------HHHHHHHTCCTTTHHHHHHHHH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCcc---------------HHHHHHHhcccCcHHHHHHHHh
Confidence 345779999999999999999999999887 5888887 45555554 78899999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCC
Q psy14202 232 HHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDING 311 (356)
Q Consensus 232 ~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g 311 (356)
+|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .+++ .|
T Consensus 215 ~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~--~ga~------~g 286 (301)
T 2b0o_E 215 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ--AQAG------TF 286 (301)
T ss_dssp HSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH--HHHH------TT
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--hcCC------CC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5655 57
Q ss_pred CcHHHHHHhCCCH
Q psy14202 312 LRPLDRAISCRNV 324 (356)
Q Consensus 312 ~t~l~~A~~~~~~ 324 (356)
.|||++|+.+|+.
T Consensus 287 ~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 287 AFPLHVDYSWVIS 299 (301)
T ss_dssp SSCCC--------
T ss_pred CChhHHHHhcCCc
Confidence 8999999988864
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.9e-24 Score=172.78 Aligned_cols=137 Identities=23% Similarity=0.248 Sum_probs=125.5
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTD-TTGRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~a~~~~ 206 (356)
.+.||||+|+..|+.++++.|++ |.+++..|..|.||||+|+..|+.+++++|+++|++++.++ ..|.|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~t--------- 112 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT--------- 112 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCC---------
Confidence 45689999999999999999999 99999999999999999999999999999999999999888 77877
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMR 286 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 286 (356)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++. ..+.+++++|+..
T Consensus 113 ------pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~ 169 (183)
T 3deo_A 113 ------ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRI 169 (183)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHH
T ss_pred ------HHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHc
Confidence 78888888999999999999999999999999999999875432 3567999999999
Q ss_pred CCHHHHHHhhh
Q psy14202 287 GRIQAVTYLLD 297 (356)
Q Consensus 287 ~~~~~v~~Ll~ 297 (356)
|..+++++|.+
T Consensus 170 ~~~~i~~~L~~ 180 (183)
T 3deo_A 170 GLEKVINVLEG 180 (183)
T ss_dssp HHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 99999999986
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.3e-24 Score=162.40 Aligned_cols=108 Identities=36% Similarity=0.477 Sum_probs=56.2
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy14202 161 QGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240 (356)
Q Consensus 161 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 240 (356)
.|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..++.+++++|+++|++++.+|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 70 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRK---------------PLHYAADCGQLEILEFLLLKGADINAPD 70 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSC---------------HHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCc---------------HHHHHHHcCCHHHHHHHHHcCCCCCcCC
Confidence 3445555555555555555555555555555544444 3444444444555555555555555555
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy14202 241 GSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWA 283 (356)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 283 (356)
..|.||||+|+..++.+++++|+++|++++.+|..|.||+|+|
T Consensus 71 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 5555555555555555555555555555555555555555555
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=4.1e-24 Score=180.74 Aligned_cols=137 Identities=23% Similarity=0.248 Sum_probs=124.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTD-TTGRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~a~~~~ 206 (356)
.+.||||+|+..|+.+++++|++ |.+++.+|..|.||||+|+..|+.++|++|+++|++++.++ ..|.|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t--------- 113 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT--------- 113 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCC---------
Confidence 45689999999999999999999 99999999999999999999999999999999999999888 67776
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMR 286 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 286 (356)
|||+|+..|+.+++++|+++|++++.++..|.||||+|+..+. ...+.|||++|+..
T Consensus 114 ------~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 114 ------ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRI 170 (244)
T ss_dssp ------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHH
T ss_pred ------HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHc
Confidence 7888888899999999999999999999999999999986322 25678999999999
Q ss_pred CCHHHHHHhhh
Q psy14202 287 GRIQAVTYLLD 297 (356)
Q Consensus 287 ~~~~~v~~Ll~ 297 (356)
|+.+++++|++
T Consensus 171 g~~~iv~~L~~ 181 (244)
T 3ui2_A 171 GLEKVINVLEG 181 (244)
T ss_dssp HHHHHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 99999999987
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.5e-24 Score=162.17 Aligned_cols=111 Identities=28% Similarity=0.359 Sum_probs=105.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRI 289 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 289 (356)
+.|||+.|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~ 86 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV 86 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCC
Q psy14202 290 QAVTYLLDRDRGAMIEHVDINGLRPLDRAISCR 322 (356)
Q Consensus 290 ~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~ 322 (356)
+++++|++ .+++++.+|..|.||+++|...+
T Consensus 87 ~~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 87 SCVKLLLS--KGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHH--TTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHHH--cCCCCCCcCCCCCCHHHHhCCHH
Confidence 99999999 89999999999999999994433
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=3e-24 Score=186.86 Aligned_cols=142 Identities=18% Similarity=0.190 Sum_probs=112.5
Q ss_pred CCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCC----CCCCCCCCcHHHHHHHc---CcHHHHHHHHHC
Q psy14202 193 TTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPL----DQTDGSHKTPLMIAAQE---GHVGLLELLLDK 265 (356)
Q Consensus 193 ~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~l~~a~~~---~~~~~v~~Ll~~ 265 (356)
....++|+.|+..++.+ .+...+..|. ..+. ...+..|.||||+|+.. ++.+++++|+++
T Consensus 149 ~~~~~~L~~A~~~g~~~---~v~~ll~~g~----------d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ 215 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLL---SVLEAFANGQ----------DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215 (301)
T ss_dssp C-CHHHHHHHHHTTCHH---HHHHHHHTTC----------CTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred CchHHHHhhhhhccCHH---HHHHHHhcCC----------cccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc
Confidence 34557899999998864 2222233331 1111 12467899999999997 899999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCC--hhHHH
Q psy14202 266 GADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLG--PTTWS 343 (356)
Q Consensus 266 g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~--~~~~a 343 (356)
|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++|++.+ +..+|
T Consensus 216 gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~--~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh~A 293 (301)
T 2b0o_E 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLK--GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVD 293 (301)
T ss_dssp SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC--
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCChhHHH
Confidence 99999999999999999999999999999999 899999999999999999999999999999999999875 55677
Q ss_pred HhhCCc
Q psy14202 344 MAAGKP 349 (356)
Q Consensus 344 ~~~~~~ 349 (356)
+..|+.
T Consensus 294 ~~~g~~ 299 (301)
T 2b0o_E 294 YSWVIS 299 (301)
T ss_dssp ------
T ss_pred HhcCCc
Confidence 777753
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.7e-23 Score=180.18 Aligned_cols=130 Identities=19% Similarity=0.250 Sum_probs=121.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCccCCCCCCcHHHH
Q psy14202 212 SPLMLAVKEGHWATAEKLLQHHAPLD------QTDGSHKTPLMIAAQE---GHVGLLELLLDKGADILREDGEGLTALSW 282 (356)
Q Consensus 212 ~~l~~a~~~~~~~~~~~Ll~~g~~~~------~~~~~g~t~l~~a~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 282 (356)
++|+.|+..++.+.++.+++.|.+++ ..+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 58999999999999999999999844 4578899999999999 89999999999999999999999999999
Q ss_pred HHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCChhHHH
Q psy14202 283 ACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLGPTTWS 343 (356)
Q Consensus 283 a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~a 343 (356)
|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++|++..+...+
T Consensus 212 A~~~g~~~~v~~Ll~--~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 270 (278)
T 1dcq_A 212 CCLTDNAECLKLLLR--GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVH 270 (278)
T ss_dssp HHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCSSCC
T ss_pred HHHcCCHHHHHHHHH--cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccee
Confidence 999999999999999 89999999999999999999999999999999999987555443
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=2.1e-24 Score=179.93 Aligned_cols=123 Identities=25% Similarity=0.262 Sum_probs=64.2
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhc-CCCCCC
Q psy14202 160 SQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQH-HAPLDQ 238 (356)
Q Consensus 160 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-g~~~~~ 238 (356)
..|.||||+|+..|+.++|++|++.|++++.++..|.| |||+|+..|+.+++++|+++ |++++.
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t---------------~L~~A~~~~~~~~v~~Ll~~~g~~~~~ 135 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGST---------------ALYWACHGGHKDIVEMLFTQPNIELNQ 135 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHTTSTTCCCCC
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCC---------------HHHHHHHcCCHHHHHHHHcCCCCCccc
Confidence 34455555555555555555555555555555555444 34444444555555555554 555555
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 239 TDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 239 ~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
++..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.++++.|+.
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 55555555555555555555555555555555555555555555555555555555554
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1e-23 Score=175.83 Aligned_cols=134 Identities=21% Similarity=0.188 Sum_probs=113.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcC
Q psy14202 128 GAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAA-GASLGRTDTTGRCALVHAARGG 206 (356)
Q Consensus 128 ~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~ 206 (356)
.+.|+||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.++|++|++. |++++.+|..|.|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~t--------- 142 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT--------- 142 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCC---------
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCC---------
Confidence 466899999999999999999999999999999999999999999999999999998 9999999999987
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCC
Q psy14202 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEG 276 (356)
Q Consensus 207 ~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g 276 (356)
|||+|+..|+.+++++|+++|++++.++..|.|||++|+..+..++++.|++.|+..+..+..|
T Consensus 143 ------pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 143 ------ALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp ------HHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred ------HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 7788888899999999999999999999999999999999999999999999999887766544
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=7.6e-23 Score=190.62 Aligned_cols=130 Identities=16% Similarity=0.212 Sum_probs=118.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCC------CCCCCcHHHHHHH---cCcHHHHHHHHHCCCCCccCCCCCCcHHHH
Q psy14202 212 SPLMLAVKEGHWATAEKLLQHHAPLDQT------DGSHKTPLMIAAQ---EGHVGLLELLLDKGADILREDGEGLTALSW 282 (356)
Q Consensus 212 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~------~~~g~t~l~~a~~---~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 282 (356)
+.|+.|+..|+.++++.|++.|+++|.+ +..|.||||+|+. .|+.+++++|+++|+++|.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 3799999999999999999999999988 8899999999977 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHHHcCCCCChhHHH
Q psy14202 283 ACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLGPTTWS 343 (356)
Q Consensus 283 a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~a 343 (356)
|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++|++++.++..
T Consensus 214 A~~~g~~~~v~~Ll~--~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 214 AALYNQPDCLKLLLK--GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HTTTTCHHHHHHHHH--TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------
T ss_pred HHHcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 999999999999999 89999999999999999999999999999999999999865543
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-22 Score=145.04 Aligned_cols=93 Identities=38% Similarity=0.583 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHHhC
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~~~ 321 (356)
+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE--AGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCCCccCCCCCCHHHHHHHc
Confidence 47889999999999999999999999999999999999999999999999999998 8899999999999999999999
Q ss_pred CCHHHHHHHHHcCCC
Q psy14202 322 RNVPVVQCFLRKGAK 336 (356)
Q Consensus 322 ~~~~i~~~Ll~~ga~ 336 (356)
|+.+++++|+++||+
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999875
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=6.4e-23 Score=182.53 Aligned_cols=165 Identities=25% Similarity=0.261 Sum_probs=112.6
Q ss_pred CCCCCcHHHHHHHC-CCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q psy14202 159 NSQGRTPLSLAAGR-GHMEAVRTLVAAGASLGRTD--TTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAP 235 (356)
Q Consensus 159 ~~~g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~~--~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 235 (356)
...+.|+||.|+.. |+.++++.|+++|++++..+ ..|.| |||+|+..|+.+++++|+++|++
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~T---------------pLh~Aa~~g~~~iv~~LL~~Gad 260 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNAT---------------PLIQATAANSLLACEFLLQNGAN 260 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCC---------------HHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCC---------------HHHHHHHCCCHHHHHHHHHcCCC
Confidence 34556899999999 99999999999999999887 66766 77788888899999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcC-CCCCcccCCCCCCcH
Q psy14202 236 LDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRD-RGAMIEHVDINGLRP 314 (356)
Q Consensus 236 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~~~~g~t~ 314 (356)
+|.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+... ...+....+..+.|+
T Consensus 261 vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~ 340 (368)
T 3jue_A 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETY 340 (368)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------
T ss_pred CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999998631 223334456677888
Q ss_pred HHHHHhCCC--HHHHHHHHHcCCCCC
Q psy14202 315 LDRAISCRN--VPVVQCFLRKGAKLG 338 (356)
Q Consensus 315 l~~A~~~~~--~~i~~~Ll~~ga~~~ 338 (356)
++.+..... .+-.+.|.+++.+++
T Consensus 341 l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 341 LDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp --------------------------
T ss_pred HHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 888776653 345566777766654
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=2.9e-22 Score=186.71 Aligned_cols=128 Identities=17% Similarity=0.115 Sum_probs=115.0
Q ss_pred chHHHHHHHcCCHHHHHHHHhCCCCCCcc------CCCCCcHHHHHHH---CCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q psy14202 130 APALCLFAHEGNSEMIALLLEFHACIDLA------NSQGRTPLSLAAG---RGHMEAVRTLVAAGASLGRTDTTGRCALV 200 (356)
Q Consensus 130 ~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~g~t~L~~A~~---~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~ 200 (356)
.+.|+.|+..|+.+.++.|++.|++++.. +..|.||||+|+. .|+.++|++|+++|++++.+|..|.|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~T--- 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT--- 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCC---
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCc---
Confidence 36799999999999999999999999877 8899999999976 89999999999999999999999987
Q ss_pred HHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccC
Q psy14202 201 HAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRE 272 (356)
Q Consensus 201 ~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~ 272 (356)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 210 ------------pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 210 ------------ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp ------------HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred ------------HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 677788888999999999999999999999999999999999999999999999998764
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=8e-22 Score=175.45 Aligned_cols=144 Identities=24% Similarity=0.241 Sum_probs=117.4
Q ss_pred CCchHHHHHHHc-CCHHHHHHHHhCCCCCCccC--CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q psy14202 128 GAAPALCLFAHE-GNSEMIALLLEFHACIDLAN--SQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAAR 204 (356)
Q Consensus 128 ~~~~~l~~A~~~-g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~ 204 (356)
.+.++||.|+.. |+.++++.|++.|++++..+ ..|.||||+|+..|+.++|++|+++|++++.+|..|.|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~T------- 270 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRG------- 270 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCC-------
Confidence 345789999999 99999999999999999988 89999999999999999999999999999999999987
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCC---CCCccCCCCCCcHHH
Q psy14202 205 GGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG---ADILREDGEGLTALS 281 (356)
Q Consensus 205 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~l~ 281 (356)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+ .+....+..+.|+++
T Consensus 271 --------pLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~ 342 (368)
T 3jue_A 271 --------PLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLD 342 (368)
T ss_dssp --------HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------
T ss_pred --------HHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHH
Confidence 677888889999999999999999999999999999999999999999999875 333445566778887
Q ss_pred HHHHc
Q psy14202 282 WACMR 286 (356)
Q Consensus 282 ~a~~~ 286 (356)
.+...
T Consensus 343 i~~~~ 347 (368)
T 3jue_A 343 IFRDF 347 (368)
T ss_dssp -----
T ss_pred HHHHH
Confidence 76654
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=2.1e-21 Score=138.38 Aligned_cols=91 Identities=45% Similarity=0.760 Sum_probs=39.8
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q psy14202 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241 (356)
Q Consensus 162 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 241 (356)
|+||||+|+..|+.+++++|+++|++++.+|..|.| |||+|+..++.+++++|+++|++++.+|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t---------------~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 66 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---------------PLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC---------------HHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC---------------HHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 344444444444444444444444444444444433 33333334444444444444444444444
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCC
Q psy14202 242 SHKTPLMIAAQEGHVGLLELLLDKGA 267 (356)
Q Consensus 242 ~g~t~l~~a~~~~~~~~v~~Ll~~g~ 267 (356)
.|.||||+|+..|+.+++++|+++|+
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44444444444444444444444443
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=4.3e-21 Score=165.10 Aligned_cols=77 Identities=23% Similarity=0.206 Sum_probs=41.4
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhh
Q psy14202 221 GHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297 (356)
Q Consensus 221 ~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 297 (356)
++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 183 ~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 183 TSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp TTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555554
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.4e-21 Score=145.19 Aligned_cols=107 Identities=33% Similarity=0.476 Sum_probs=65.7
Q ss_pred cCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy14202 158 ANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLD 237 (356)
Q Consensus 158 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~ 237 (356)
+|..|.||||+|+..|+.+++++|+++|++++.++..|.| |||.|+..++.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t---------------~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNT---------------PLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCC---------------TTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC---------------HHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 3556666666666666666666666666666666665554 4445555555666666666666666
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcH
Q psy14202 238 QTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTA 279 (356)
Q Consensus 238 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 279 (356)
.++..|.||||+|+..++.+++++|+++|++++.++..|.+|
T Consensus 70 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666666666666666666666666554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=6.7e-21 Score=141.46 Aligned_cols=97 Identities=31% Similarity=0.399 Sum_probs=50.7
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHHHH
Q psy14202 240 DGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAI 319 (356)
Q Consensus 240 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~A~ 319 (356)
|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++ .+++++.+|..|.|||++|+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLA--KGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTT--TTCCTTCCCTTCCCTTHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH--cCCCCcccCCCCCCHHHHHH
Confidence 4445555555555555555555555555555555555555555555555555555554 45555555555555555555
Q ss_pred hCCCHHHHHHHHHcCCCCC
Q psy14202 320 SCRNVPVVQCFLRKGAKLG 338 (356)
Q Consensus 320 ~~~~~~i~~~Ll~~ga~~~ 338 (356)
..++.+++++|+++|+++|
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHH
T ss_pred HCCCHHHHHHHHHcCCCCC
Confidence 5555555555555555544
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=9.9e-19 Score=128.53 Aligned_cols=91 Identities=26% Similarity=0.387 Sum_probs=71.1
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHhhhcCCCCCcccCCCCCCcHHHH
Q psy14202 238 QTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDR 317 (356)
Q Consensus 238 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~ 317 (356)
..+.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~--~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE--AGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCccccccCCCcHHHH
Confidence 345667788888888888888888888888888888888888888888888888888887 677888888888888888
Q ss_pred HHhCCCHHHHHHH
Q psy14202 318 AISCRNVPVVQCF 330 (356)
Q Consensus 318 A~~~~~~~i~~~L 330 (356)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 8888888887766
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=4.3e-18 Score=125.06 Aligned_cols=86 Identities=29% Similarity=0.396 Sum_probs=82.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRI 289 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 289 (356)
+.|+|+.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q psy14202 290 QAVTYL 295 (356)
Q Consensus 290 ~~v~~L 295 (356)
+++++|
T Consensus 104 ~~~~~L 109 (110)
T 2zgd_A 104 DLAEIL 109 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=40.95 E-value=23 Score=19.14 Aligned_cols=17 Identities=35% Similarity=0.565 Sum_probs=10.5
Q ss_pred HHHHHHCCCHHHHHHHH
Q psy14202 166 LSLAAGRGHMEAVRTLV 182 (356)
Q Consensus 166 L~~A~~~g~~~iv~~Ll 182 (356)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45566666666666654
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=39.78 E-value=65 Score=29.26 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=17.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHHH
Q psy14202 143 EMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTL 181 (356)
Q Consensus 143 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L 181 (356)
++.+.+.+.|..+|.... .+.+...++.|..+-+..+
T Consensus 91 ~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l 127 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDM 127 (501)
T ss_dssp HHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHH
Confidence 445555556655543321 2344455566665544333
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=26.00 E-value=1.7e+02 Score=26.46 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHH----hCCCCCCccCCCCCcHHHHHHHCCCHHHHHHH--
Q psy14202 108 KVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLL----EFHACIDLANSQGRTPLSLAAGRGHMEAVRTL-- 181 (356)
Q Consensus 108 ~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll----~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L-- 181 (356)
++++.+...|..+|... ..+.+...+..|..+-+..++ +.|..++... -.+.+...++.|..+-+..+
T Consensus 91 ~lf~~M~~~G~~Pd~~t----yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT----FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp HHHHHHHHTTCCCCHHH----HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH----HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHH
Confidence 56677778888877553 246788888999987665555 4566555432 12455556788886655444
Q ss_pred --HHcCCCCC
Q psy14202 182 --VAAGASLG 189 (356)
Q Consensus 182 --l~~g~~~~ 189 (356)
.+.|..++
T Consensus 165 ~M~~~G~~Pd 174 (501)
T 4g26_A 165 HMVESEVVPE 174 (501)
T ss_dssp HHHHTTCCCC
T ss_pred HHHhcCCCCC
Confidence 45676653
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.99 E-value=3.2e+02 Score=24.05 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=17.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHh
Q psy14202 210 NLSPLMLAVKEGHWATAEKLLQ 231 (356)
Q Consensus 210 ~~~~l~~a~~~~~~~~~~~Ll~ 231 (356)
|.|.+|+|++..+.+++..|+.
T Consensus 69 g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 69 GYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHH
T ss_pred CchhhhhhhhhhhhhHHHHhhh
Confidence 3457888888888888888875
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.90 E-value=2.3e+02 Score=24.91 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=42.4
Q ss_pred hhcCCCHHHHHHHHHCCCCccccccccCCchHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHCCCHHHHHH
Q psy14202 101 NVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRT 180 (356)
Q Consensus 101 a~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~ 180 (356)
.+..|+...|+..+..|.+++..- |....+. +. +.+ . -.-|.|.+|.|++..+.+++..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~l------t~~e~~l-----------ln-~~~--a-f~~g~tlvhlair~~r~~~l~~ 87 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQL------TADEVRL-----------LN-RPS--A-FDVGYTLVHLAIRFQRQDMLAI 87 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCC------CHHHHHH-----------HC-CTT--T-CCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhccc------CHHHHHH-----------hC-CCc--c-cccCchhhhhhhhhhhhhHHHH
Confidence 556788888888888888876432 2222221 11 111 1 2358899999999999999999
Q ss_pred HHHc
Q psy14202 181 LVAA 184 (356)
Q Consensus 181 Ll~~ 184 (356)
|+..
T Consensus 88 ll~~ 91 (454)
T 3zrh_A 88 LLTE 91 (454)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8863
Done!