RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14202
(356 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 111 bits (279), Expect = 2e-28
Identities = 61/219 (27%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRT 191
L + + G+ ++ LL+ A +++N + TPL +AA GH E + L+ A +
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62
Query: 192 DTTGRCALVHAARGGHLQ------------------NLSPLMLAVKEGHWATAEKLLQHH 233
+ L AAR GH +PL +A +EGH T LL+
Sbjct: 63 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122
Query: 234 APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVT 293
A TPL +AA+ G V + ELLL++ A GLT L A + V
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK 182
Query: 294 YLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLR 332
L RG NG PL A V V + L+
Sbjct: 183 LL--LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 219
Score = 105 bits (263), Expect = 3e-26
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 22/243 (9%)
Query: 106 NVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTP 165
++ + + LL GA N L + A G++E+ LL+ A ++ +TP
Sbjct: 12 HLPIVKNLLQRGASPNVSNVK--VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP 69
Query: 166 LSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQN--------------- 210
L AA GH V+ L+ A+ T G L AAR GH++
Sbjct: 70 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 129
Query: 211 ---LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGA 267
+PL +A K G AE LL+ A + + TPL +A ++ +++LLL +G
Sbjct: 130 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 189
Query: 268 DILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVV 327
G T L A + +++ LL + G+ PL A + +V
Sbjct: 190 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG--SANAESVQGVTPLHLAAQEGHAEMV 247
Query: 328 QCF 330
Sbjct: 248 ALL 250
Score = 102 bits (254), Expect = 6e-25
Identities = 65/249 (26%), Positives = 98/249 (39%), Gaps = 28/249 (11%)
Query: 131 PALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGR 190
L + A G + LLLE A + A G TPL +A +++ V+ L+ G S
Sbjct: 134 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 193
Query: 191 TDTTGRCALVHAARGGHLQ------------------NLSPLMLAVKEGHWATAEKLLQH 232
G L AA+ ++ ++PL LA +EGH LL
Sbjct: 194 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 253
Query: 233 HAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAV 292
A + + S TPL + AQEGHV + ++L+ G + G T L A G I+ V
Sbjct: 254 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 313
Query: 293 TYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKL------GPTTWSMAA 346
+ A + G PL +A + +V L+ GA G T ++A
Sbjct: 314 KF--LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 371
Query: 347 --GKPEVME 353
G V +
Sbjct: 372 RLGYISVTD 380
Score = 99.7 bits (247), Expect = 5e-24
Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 22/242 (9%)
Query: 106 NVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTP 165
V+V+ LLL A N + L + H N +++ LLL G TP
Sbjct: 144 KVRVAELLLERDAHPNAAGKN--GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 201
Query: 166 LSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ---------------- 209
L +AA + +E R+L+ G S G L AA+ GH +
Sbjct: 202 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 261
Query: 210 --NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGA 267
L+PL L +EGH A+ L++H +D T TPL +A+ G++ L++ LL A
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA 321
Query: 268 DILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVV 327
D+ + G + L A +G VT LL GA V +G PL A + V
Sbjct: 322 DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN--GASPNEVSSDGTTPLAIAKRLGYISVT 379
Query: 328 QC 329
Sbjct: 380 DV 381
Score = 98.1 bits (243), Expect = 2e-23
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 50/207 (24%)
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHW 223
TPL +A+ GH+ V+ L+ GAS ++ +PL +A + GH
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE---------------TPLHMAARAGHT 46
Query: 224 ATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRE----------- 272
A+ LLQ+ A ++ +TPL AA+ GH +++LLL+ A+
Sbjct: 47 EVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIA 106
Query: 273 ----------------------DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDIN 310
+G T L A G+++ LL +R A N
Sbjct: 107 AREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL--ERDAHPNAAGKN 164
Query: 311 GLRPLDRAISCRNVPVVQCFLRKGAKL 337
GL PL A+ N+ +V+ L +G
Sbjct: 165 GLTPLHVAVHHNNLDIVKLLLPRGGSP 191
Score = 95.0 bits (235), Expect = 2e-22
Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 21/230 (9%)
Query: 102 VYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQ 161
V+ N+ + +LLL G + L + A + E+ LL++ + + Q
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWN--GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230
Query: 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQ------------ 209
G TPL LAA GH E V L++ A+ + +G L A+ GH+
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 210 ------NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLL 263
+PL +A G+ + LLQH A ++ +PL AAQ+GH ++ LLL
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350
Query: 264 DKGADILREDGEGLTALSWACMRGRIQAVTYLLD-RDRGAMIEHVDINGL 312
GA +G T L+ A G I L D + + D + +
Sbjct: 351 KNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400
Score = 90.4 bits (223), Expect = 9e-21
Identities = 36/158 (22%), Positives = 56/158 (35%), Gaps = 31/158 (19%)
Query: 211 LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADIL 270
L+PL +A GH + LLQ A + ++ +TPL +AA+ GH + + LL A +
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60
Query: 271 REDGEGLTALSWACMRGRIQAVTYLLDR-------------------------------D 299
+ + T L A G V LL+ +
Sbjct: 61 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120
Query: 300 RGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKL 337
+ A + G PL A V V + L + A
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP 158
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 94.3 bits (233), Expect = 9e-23
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 35/269 (13%)
Query: 102 VYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQ 161
V + +V + + LL GA+ N E G P L +++ LLL A L
Sbjct: 13 VQNEDVDLVQQLLEGGANVNFQEEEGGWTP-LHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 162 GRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNL---------- 211
G TP LAA G ++ ++ ++ GA + D G A + AA G ++ L
Sbjct: 72 GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131
Query: 212 ------------------SPLMLAVKEGHWATAEKLLQHH-APLDQTDGSHKTPLMIAAQ 252
+ LM A ++GH + LL A ++ D + L+ A
Sbjct: 132 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191
Query: 253 EGHVGLLE----LLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVD 308
+E LLLD GAD+ G T L A + + V LL+++ I D
Sbjct: 192 SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTD 250
Query: 309 INGLRPLDRAISCRNVPVVQCFLRKGAKL 337
+G L A+ + + + ++GA
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGAST 279
Score = 88.1 bits (217), Expect = 1e-20
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 151 FHACIDLANSQGRTPLSLAAGRGHMEAVRTLVA-AGASLGRTDTTGRCALVHAARGGHLQ 209
+ G T L AA +GH+E ++ L+ GA + D GR AL+HA
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSD-- 194
Query: 210 NLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDK-GAD 268
A LL H A ++ KTPL++A ++ H+GL++ LL++ +
Sbjct: 195 ---------DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245
Query: 269 ILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDI 309
I D +G TAL A + L RGA + D+
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLC--KRGASTDCGDL 284
Score = 61.1 bits (147), Expect = 2e-11
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 22/184 (11%)
Query: 158 ANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLA 217
A + L A ++ V+ L+ GA++ + G +PL A
Sbjct: 1 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGW--------------TPLHNA 46
Query: 218 VKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGL 277
V+ E LL+H A + TP ++AA G V LL+L L KGAD+ D G
Sbjct: 47 VQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGF 106
Query: 278 TALSWACMRGRIQAVTYLLDR--------DRGAMIEHVDINGLRPLDRAISCRNVPVVQC 329
TA A + G+++A+ +L R E + G L A +V V++
Sbjct: 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166
Query: 330 FLRK 333
L +
Sbjct: 167 LLDE 170
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 82.3 bits (202), Expect = 5e-19
Identities = 44/206 (21%), Positives = 71/206 (34%), Gaps = 18/206 (8%)
Query: 133 LCLFAHEGNSEMIA-LLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRT 191
+C A+ G E + +L + + RT L A GH
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHT---------------E 51
Query: 192 DTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAA 251
L SPL +A G + LL A ++ + + TPL AA
Sbjct: 52 IVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAA 111
Query: 252 QEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDING 311
+ + +LL+ GA+ +D TA+ A +G ++ + LL D G
Sbjct: 112 SKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKA--STNIQDTEG 169
Query: 312 LRPLDRAISCRNVPVVQCFLRKGAKL 337
PL A V + + +GA +
Sbjct: 170 NTPLHLACDEERVEEAKLLVSQGASI 195
Score = 78.9 bits (193), Expect = 9e-18
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 133 LCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTD 192
L + A G E++ LL A ++ N G TPL AA + E L+ GA+ D
Sbjct: 74 LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 133
Query: 193 TTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQ 252
+ + A +G+ LL + A + D TPL +A
Sbjct: 134 HYEA---------------TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACD 178
Query: 253 EGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297
E V +LL+ +GA I E+ E T L A G + +++
Sbjct: 179 EERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222
Score = 63.4 bits (153), Expect = 2e-12
Identities = 47/242 (19%), Positives = 84/242 (34%), Gaps = 23/242 (9%)
Query: 24 SNKFLCDL-RAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQA 82
SN +C+L +G L A ++ + L L
Sbjct: 3 SNLMVCNLAYSGKLEELKESI-LADKSLATRTDQDSRTALHWACSAGH---TEIVEFLLQ 58
Query: 83 HWISSVCQSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNS 142
+ + A + ++ + LL GA N + + G P L A +
Sbjct: 59 LGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQN-GCTP-LHYAASKNRH 116
Query: 143 EMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHA 202
E+ +LLE A D + T + AA +G+++ + L+ AS DT G L A
Sbjct: 117 EIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLA 176
Query: 203 ARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELL 262
++ A+ L+ A + + KTPL +A G +L+ +
Sbjct: 177 CDEERVE---------------EAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRM 220
Query: 263 LD 264
++
Sbjct: 221 VE 222
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 77.8 bits (190), Expect = 7e-17
Identities = 40/196 (20%), Positives = 64/196 (32%), Gaps = 13/196 (6%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGR- 190
L N E++ L++ + ++ G + L A + T A L
Sbjct: 110 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 169
Query: 191 ---TDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHA-PLDQTDGSHKTP 246
D+ R L H + A K +++ P+ ++
Sbjct: 170 LILEDSMNRTILHHIIITSGMTGC---SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226
Query: 247 LMIAAQEGHVGLLELLLDK---GADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAM 303
E +LE L K + +D G T L+ A G I V LL D GA
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALL--DYGAD 284
Query: 304 IEHVDINGLRPLDRAI 319
+ +GLRP+D
Sbjct: 285 PFIANKSGLRPVDFGA 300
Score = 71.2 bits (173), Expect = 1e-14
Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 9/197 (4%)
Query: 160 SQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVK 219
G TPL ++E V+ LV G++ D G LV A + + + +
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164
Query: 220 EGHWATAEKLLQHHAPLDQ--TDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGL 277
+ + + L A + + ++ + I E
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224
Query: 278 TALSWACMRGRIQAVTYLLDRDR-GAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGA- 335
+ + + + L + M+ D NG L+ A N+ +V L GA
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284
Query: 336 -----KLGPTTWSMAAG 347
K G AG
Sbjct: 285 PFIANKSGLRPVDFGAG 301
Score = 70.9 bits (172), Expect = 2e-14
Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 13/186 (6%)
Query: 106 NVKVSRLLLLSGADANHITEFLGAAP--ALCLFAHEGNSEMIALLLEFHACIDLANSQGR 163
N+++ + L+ G++ + + A+ + + ALL + C+ L +S R
Sbjct: 119 NLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNR 178
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQN---LSPLMLAVKE 220
T L M A+ D + R S E
Sbjct: 179 TILHHIIITSGMTGCSA-----AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 233
Query: 221 GHWATAEKLLQHH---APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGL 277
+ E L L+ D + T L IAA+ G++ +++ LLD GAD + GL
Sbjct: 234 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 293
Query: 278 TALSWA 283
+ +
Sbjct: 294 RPVDFG 299
Score = 53.5 bits (127), Expect = 1e-08
Identities = 21/185 (11%), Positives = 46/185 (24%), Gaps = 13/185 (7%)
Query: 32 RAGHAGIAFRLSRLQAPLDA-DKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQ 90
+ + L + + D E V + + D +
Sbjct: 116 SIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS 175
Query: 91 SPAQALCSLRNVYSPNVKVS----------RLLLLSGADANHITEFLGAAP--ALCLFAH 138
L + + ++ +
Sbjct: 176 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 235
Query: 139 EGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCA 198
+ E + L ++ +S G T L++AA G++ V L+ GA + +G
Sbjct: 236 DSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 295
Query: 199 LVHAA 203
+ A
Sbjct: 296 VDFGA 300
Score = 48.9 bits (115), Expect = 3e-07
Identities = 18/130 (13%), Positives = 33/130 (25%), Gaps = 3/130 (2%)
Query: 206 GHLQNLSPLMLAVKEGHWATAEKLLQHHAPLD-QTDGSHKTPLMIAAQEGHVGLLELLLD 264
G N ++ + L+ D TPL ++ L++ L+
Sbjct: 69 GGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK 128
Query: 265 KGADILREDGEGLTALSWACMRGRIQAVTYLLDR--DRGAMIEHVDINGLRPLDRAISCR 322
G++ L D G + L A + D L I
Sbjct: 129 HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 188
Query: 323 NVPVVQCFLR 332
+ +
Sbjct: 189 GMTGCSAAAK 198
Score = 43.5 bits (101), Expect = 2e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAG 171
L + A GN ++ LL++ A +AN G P+ AG
Sbjct: 262 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 301
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 78.0 bits (191), Expect = 9e-17
Identities = 36/242 (14%), Positives = 56/242 (23%), Gaps = 46/242 (19%)
Query: 100 RNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLAN 159
S + LLL S I A L A G+ ++ L E +A
Sbjct: 99 ITGCSSALDTLCLLLTSDEIVKVIQAE--NYQAFRLAAENGHLHVLNRLCELAPTEIMAM 156
Query: 160 --SQGRTPLSLAAGRGHMEAVRTLVAAGASL---GRTDTTGRCALVHAARGGHLQNLS-- 212
++ LAA GH+ + L + A GH ++
Sbjct: 157 IQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 216
Query: 213 ---------PLMLAVKEGHWATAEKLLQHHAPL-----------------------DQTD 240
+ + G + +H L
Sbjct: 217 LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQG 276
Query: 241 GSHKTPLMIAAQEGHVGLLELLLDKGAD-----ILREDGEGLTALSWACMRGRIQAVTYL 295
L+ E + + LL G+ L A G A L
Sbjct: 277 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336
Query: 296 LD 297
L
Sbjct: 337 LS 338
Score = 75.3 bits (184), Expect = 8e-16
Identities = 38/270 (14%), Positives = 74/270 (27%), Gaps = 42/270 (15%)
Query: 95 ALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAP---------ALCLFAHEGNS--- 142
A+ +V +LL L A N + L + + A G S
Sbjct: 47 AIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSAL 106
Query: 143 EMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHA 202
+ + LLL + + ++ LAA GH+ + L +
Sbjct: 107 DTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT-------------EI 153
Query: 203 ARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLD---QTDGSHKTPLMIAAQEGHVGLL 259
+N LA + GH +L + ++ A GH ++
Sbjct: 154 MAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI 213
Query: 260 ELLLDKGADILRED-------GEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDIN-- 310
LLD + + + + + + + + + V +
Sbjct: 214 NFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSEC 273
Query: 311 -----GLRPLDRAISCRNVPVVQCFLRKGA 335
LR L R + ++ L
Sbjct: 274 LQGFYMLRNLIRRNDEVLLDDIRFLLSIPG 303
Score = 68.0 bits (165), Expect = 3e-13
Identities = 17/143 (11%), Positives = 37/143 (25%), Gaps = 14/143 (9%)
Query: 209 QNLSPLMLAVKEGHWATAEKLLQHHA-----------PLDQTDGSHKTPLMIAAQEGH-- 255
+ + L + + L ++A + + +AA G
Sbjct: 45 KEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSS 104
Query: 256 -VGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRP 314
+ L LLL + E A A G + + L + ++ +
Sbjct: 105 ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA 164
Query: 315 LDRAISCRNVPVVQCFLRKGAKL 337
A ++ V+
Sbjct: 165 FRLAAENGHLHVLNRLCELAPTE 187
Score = 42.2 bits (98), Expect = 6e-05
Identities = 27/220 (12%), Positives = 47/220 (21%), Gaps = 34/220 (15%)
Query: 32 RAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQS 91
GH + RL L +H + V +L +++ Q+
Sbjct: 135 ENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQA 194
Query: 92 PAQALCSLRNVYSPNVKVSRLLLLSGADANHITEF------LGAAPALCLFAHEGNSEMI 145
V + V LL + P + +
Sbjct: 195 ENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD 254
Query: 146 ALLL-EFHACIDLANSQ-------GRTPLSLAAGRGHMEAVRTLVAAGA-----SLGRTD 192
A L DL L ++ +R L++
Sbjct: 255 AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIP 314
Query: 193 TTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQH 232
L LA++ G+ LL
Sbjct: 315 GDAN---------------ELLRLALRLGNQGACALLLSI 339
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 69.3 bits (168), Expect = 3e-14
Identities = 42/245 (17%), Positives = 58/245 (23%), Gaps = 71/245 (28%)
Query: 162 GRTPLSLAAGRGHMEAVRTLVAAGAS---LGRTDTTGRCALVHAARGGHLQNLSPLM--- 215
G T L LA H + L+ A L + G+ AL AA G + L
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68
Query: 216 ---------------LAVKEGHWATAEKLLQHHAPLDQT--------------DGSHKTP 246
LA + A LLQ + D SH
Sbjct: 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 247 LMIAAQEGHVGLLELLLDKGADILREDGEG------------------------------ 276
+ + D + E+ +G
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188
Query: 277 ----LTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLR 332
T L A + LL GA G PL A+ N + +
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLL--KAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246
Query: 333 KGAKL 337
GA
Sbjct: 247 HGAPE 251
Score = 60.1 bits (144), Expect = 5e-11
Identities = 39/229 (17%), Positives = 59/229 (25%), Gaps = 38/229 (16%)
Query: 106 NVKVSRLLLLSGADANHITE--FLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGR 163
+ LL A ++ LG L L A G + + L A + +A G
Sbjct: 21 HEPFLDFLLGFSAGHEYLDLQNDLGQTA-LHLAAILGEASTVEKLYAAGAGVLVAERGGH 79
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHW 223
T L LA L+ S R + + + +
Sbjct: 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA-AVDSQPNPEN 138
Query: 224 ATAEKLLQHHAPLDQTDGS----------------------------------HKTPLMI 249
+ L+ + +TPL +
Sbjct: 139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198
Query: 250 AAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDR 298
A + +LELLL GAD G T L A +R L
Sbjct: 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 57.0 bits (136), Expect = 5e-10
Identities = 52/249 (20%), Positives = 76/249 (30%), Gaps = 19/249 (7%)
Query: 26 KFLCDLRAGHAGIAFRLSRLQAPLDADKSLELGHHILKAHVYKNMTLVKYSSRDLQAHWI 85
FL AGH + + Q L + LG +Y V + R
Sbjct: 26 DFLLGFSAGHEYLDLQNDLGQTALHL--AAILGEASTVEKLYAAGAGVLVAERGGHTALH 83
Query: 86 SSVCQSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMI 145
+ C L + + + L+ + T APA +E
Sbjct: 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLT--QSQDCTPDTSHAPAAVDSQPNPENEEE 141
Query: 146 ALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARG 205
++ ++ N G TPL +A E VR R A +
Sbjct: 142 PRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRL--------------LRDAGADLNKP 187
Query: 206 GHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDK 265
+PL LAV+ + E LL+ A +TPL A + L LL
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Query: 266 GADILREDG 274
GA EDG
Sbjct: 248 GAP-EPEDG 255
Score = 43.5 bits (101), Expect = 1e-05
Identities = 31/132 (23%), Positives = 40/132 (30%), Gaps = 18/132 (13%)
Query: 188 LGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHA---PLDQTDGSHK 244
G G AL A H + LL A LD + +
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEP---------------FLDFLLGFSAGHEYLDLQNDLGQ 46
Query: 245 TPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMI 304
T L +AA G +E L GA +L + G TAL AC LL
Sbjct: 47 TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPR 106
Query: 305 EHVDINGLRPLD 316
+ D + D
Sbjct: 107 DASDTYLTQSQD 118
Score = 38.1 bits (87), Expect = 0.001
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 273 DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDI---NGLRPLDRAISCRNVPVVQC 329
+G TAL A + + +LL A E++D+ G L A V+
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLL--GFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 330 F 330
Sbjct: 64 L 64
Score = 26.6 bits (57), Expect = 4.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 306 HVDINGLRPLDRAISCRNVPVVQCFLRKGA 335
+V +G L A+ ++ P + L A
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSA 33
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 69.0 bits (167), Expect = 7e-14
Identities = 46/232 (19%), Positives = 78/232 (33%), Gaps = 47/232 (20%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGH----------------- 174
G++E + LLE A I+ AN G T L A +
Sbjct: 43 VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102
Query: 175 ----------------MEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLM--- 215
++ L++ GA +G ++ G L A + L +
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162
Query: 216 ---------LAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG 266
+ + L H + S T L +AA +G+ +L+LL+
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222
Query: 267 ADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRA 318
D+ +D +G T L A G+ +A L+ + +E V+ G D A
Sbjct: 223 YDVNIKDYDGWTPLHAAAHWGKEEACRILV--ENLCDMEAVNKVGQTAFDVA 272
Score = 62.8 bits (151), Expect = 9e-12
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 212 SPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILR 271
+ L +A +G+ + L+Q ++ D TPL AA G +L++ D+
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260
Query: 272 EDGEGLTALSWAC 284
+ G TA A
Sbjct: 261 VNKVGQTAFDVAD 273
Score = 56.7 bits (135), Expect = 1e-09
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 148 LLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGH 207
L H G T L +AA +G+ E ++ L+ A + D G
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT---------- 234
Query: 208 LQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDK 265
PL A G L+++ ++ + +T +A ++ +G LE L K
Sbjct: 235 -----PLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286
Score = 55.1 bits (131), Expect = 3e-09
Identities = 41/222 (18%), Positives = 63/222 (28%), Gaps = 47/222 (21%)
Query: 161 QGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHL------------ 208
A G E V L+ GA + + G AL A ++
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 209 ------QNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLE-- 260
+ PL A G+ AE L+ A + + TPL IA +E LL+
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 261 -------------------------LLLDKGADILREDGEGLTALSWACMRGRIQAVTYL 295
L + +R G TAL A +G + + L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 296 LDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGAKL 337
+ D +G PL A + + +
Sbjct: 219 --IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258
Score = 55.1 bits (131), Expect = 3e-09
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Query: 58 GHHILKAHVYKNMTLVKYSSRDLQAHWISSVCQSPAQALCSLRNVYSPNVKVSRLLLLSG 117
G H+ + + L ++ + V + + + ++ +R L SG
Sbjct: 129 GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSG 188
Query: 118 ADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEA 177
+ G L + A +G +E++ LL++ +++ + G TPL AA G EA
Sbjct: 189 HINDVRHAKSGGTA-LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEA 247
Query: 178 VRTLVAAGASLGRTDTTGRCALVHAARG--GHLQNL 211
R LV + + G+ A A G+L+ L
Sbjct: 248 CRILVENLCDMEAVNKVGQTAFDVADEDILGYLEEL 283
Score = 45.1 bits (105), Expect = 6e-06
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 207 HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG 266
+ + + A G +LL+ A ++ + T L A + +V +++ L++ G
Sbjct: 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96
Query: 267 ADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPV 326
A+I + D EG L A G + YL +GA + V+ G PLD A +
Sbjct: 97 ANINQPDNEGWIPLHAAASCGYLDIAEYL--ISQGAHVGAVNSEGDTPLDIAEEEAMEEL 154
Query: 327 VQCFLRK 333
+Q + +
Sbjct: 155 LQNEVNR 161
Score = 39.3 bits (90), Expect = 4e-04
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 271 REDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCF 330
+ + AC G + V LL +RGA I + +++GL L +A NV +V+
Sbjct: 35 KVKFDDGAVFLAACSSGDTEEVLRLL--ERGADINYANVDGLTALHQACIDDNVDMVKFL 92
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 64.4 bits (155), Expect = 8e-13
Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 22/207 (10%)
Query: 142 SEMIALLLEFHACIDL-ANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALV 200
+++I+ LL A ++ + G T L LAA +A + L+ AGA D TGR L
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61
Query: 201 HAARGG-------------------HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDG 241
A +PL+LA + E L+ A ++ D
Sbjct: 62 AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121
Query: 242 SHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRG 301
S KT L AA + + +LL A+ +D + T L A G +A LL D
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL--DNF 179
Query: 302 AMIEHVDINGLRPLDRAISCRNVPVVQ 328
A E D P D A + +V+
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVR 206
Score = 54.0 bits (128), Expect = 3e-09
Identities = 51/207 (24%), Positives = 68/207 (32%), Gaps = 20/207 (9%)
Query: 108 KVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLS 167
+V LL GA+ N + G L L A ++ LL+ A + ++ GRTPL
Sbjct: 3 QVISDLLAQGAELNATMDKTGETS-LHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61
Query: 168 LAAGRGHMEAV-------RTLVAAGASLGRTDTTGRCALVHAARGGHLQN---------- 210
A M T + A G T L L
Sbjct: 62 AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121
Query: 211 --LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGAD 268
+ L A + LL HHA D D +TPL +AA+EG + LLD A+
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181
Query: 269 ILREDGEGLTALSWACMRGRIQAVTYL 295
D A R V L
Sbjct: 182 REITDHMDRLPRDVASERLHHDIVRLL 208
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 62.4 bits (150), Expect = 9e-12
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 209 QNLSPLMLAVKEGHWATAEKLLQHH-APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGA 267
+ + L A + + + L+ + D+ D KTP+M+AAQEG + ++ L+ +GA
Sbjct: 186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 245
Query: 268 DILREDGEGLTALSWACMRGRIQAVTYLL 296
+ D TA A V
Sbjct: 246 SVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 55.9 bits (133), Expect = 2e-09
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 111 RLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAA 170
+ + +GAD N + L L ++A L++ A + N R+ L AA
Sbjct: 58 KECIAAGADVNAMDCDEN--TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAA 115
Query: 171 GRGHMEAVRTLVAAGASLGRTDTTGRCALVH---AARGGHLQNLSPLMLAVKEGHWATAE 227
+ ++ + G + R + A ++ L V++G
Sbjct: 116 ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD-- 173
Query: 228 KLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELL-LDKGADILREDGEGLTALSWACMR 286
A D +T L AAQ ++ +++ L +KG++ ++D +G T + A
Sbjct: 174 --YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 231
Query: 287 GRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLR 332
GRI+ V YL+ +GA +E VD A + + +V F R
Sbjct: 232 GRIEVVMYLI--QQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 53.2 bits (126), Expect = 1e-08
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 244 KTPLMIAAQ-EGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDR---- 298
++P+ + + G + E + + +I + T L W + L+
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 299 --DRGAMIEHVDINGLRPLDRAISCRNVPVVQCF 330
GA + +D + PL A+ R +V
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL 93
Score = 51.3 bits (121), Expect = 5e-08
Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 41/245 (16%)
Query: 133 LCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLV--------AA 184
+ L S I + + + RT L A E L+ AA
Sbjct: 4 IKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAA 63
Query: 185 GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAV------------------KEGHWATA 226
GA + D L+ A + ++ LM A +
Sbjct: 64 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMM 123
Query: 227 EKLLQH---HAPLDQTDGSHKTPLMIAAQEGHVG-----------LLELLLDKGADILRE 272
+L +++ D + T LMI A ++ D A E
Sbjct: 124 VYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 183
Query: 273 DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLR 332
+G TAL +A + V YL ++G+ + D +G P+ A + VV ++
Sbjct: 184 KYKGRTALHYAAQVSNMPIVKYL-VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 242
Query: 333 KGAKL 337
+GA +
Sbjct: 243 QGASV 247
Score = 50.5 bits (119), Expect = 9e-08
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 12/85 (14%)
Query: 212 SPLMLAVK-EGHWATAEKLLQHHAPLDQTDGSH-KTPLMIAAQEGHVGLLELLLD----- 264
SP+ L + G +A E + + + D H +T L A E L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESV--NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 265 ---KGADILREDGEGLTALSWACMR 286
GAD+ D + T L A +
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLA 84
Score = 35.9 bits (81), Expect = 0.005
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 164 TPLSLA-AGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGH 222
+P+ L G + ++ R L A + ++
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAE-------KSEDLI 53
Query: 223 WATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSW 282
A++ + A ++ D TPLM+A L+ L+ GAD + +AL
Sbjct: 54 VHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ 113
Query: 283 ACMRGRIQAVTYLLDRDRGAMIEH 306
A + Y+L+ +
Sbjct: 114 AAANRDFGMMVYMLNSTKLKGDIE 137
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 59.8 bits (143), Expect = 5e-11
Identities = 45/229 (19%), Positives = 77/229 (33%), Gaps = 29/229 (12%)
Query: 132 ALCLFAHEGNSEMIALLLEFH-ACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGR 190
L E + LL + + + GR PL + E L++ ++
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62
Query: 191 TDTTGRCALVHAARGGHLQNLSPLMLAVKEGHW-----------------------ATAE 227
D + NL + ++
Sbjct: 63 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 228 KLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG-ADILREDGEGLTALSWACMR 286
L+++ A + D ++ PL AA G + L+ELL G + + +D +G T L A
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 182
Query: 287 GRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLRKGA 335
G A L+++ GA + VD G + D A+ N V + FL
Sbjct: 183 GHGDAAVLLVEK-YGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
Score = 47.1 bits (110), Expect = 8e-07
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 245 TPLMIAAQEGHVGLLELLLD-KGADILREDGEGLTALSWACMRGRIQ 290
PL A E ++ LL K + +L++D +G L W+ +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHE 48
Score = 44.0 bits (102), Expect = 8e-06
Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 18/136 (13%)
Query: 134 CLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDT 193
L + E+ L+E A + + + + PL AA G ++ +
Sbjct: 110 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE----------LLCG 159
Query: 194 TGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHH-APLDQTDGSHKTPLMIAAQ 252
G+ A+ + G +PL A+ EGH A L++ + A D D +A
Sbjct: 160 LGKSAVNWQDKQGW----TPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215
Query: 253 EGHVGLLELLLDKGAD 268
E + L+ D
Sbjct: 216 EQVK---KFFLNNVVD 228
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 59.5 bits (142), Expect = 6e-11
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 29/224 (12%)
Query: 132 ALCLFAHEGNSEMIALLLEFH----ACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGAS 187
L + +GN + L+ +D+ N+ +TPL LA VR LV AGAS
Sbjct: 6 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 65
Query: 188 LGRTDTTGRCALVHAARGGHLQNL----------------------SPLMLAVKEGHWAT 225
D G+ A A L + L +AV T
Sbjct: 66 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 125
Query: 226 AEKLLQHHA-PLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWAC 284
+ LL+ A S ++PL+ A + + +++LLL GA++ + G +AL A
Sbjct: 126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 185
Query: 285 MRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQ 328
RG + V L+ GA + + PL A S R + +++
Sbjct: 186 GRGLLPLVRTLVRS--GADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 47.9 bits (112), Expect = 4e-07
Identities = 27/127 (21%), Positives = 45/127 (35%)
Query: 82 AHWISSVCQSPAQALCSLRNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGN 141
A + L +L + + + LLL + L +
Sbjct: 97 APGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 156
Query: 142 SEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVH 201
M+ LLL+ A ++ G + L A+GRG + VRTLV +GA + L+
Sbjct: 157 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 216
Query: 202 AARGGHL 208
A +
Sbjct: 217 ARSRRVI 223
Score = 47.1 bits (110), Expect = 9e-07
Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 27/202 (13%)
Query: 162 GRTPLSLAAGRGHMEAVRTLV----AAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLA 217
G TPL +A +G++ AV LV G L + + L A + L+ A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 218 V----------------------KEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGH 255
A + L+ + T L +A
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 256 VGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPL 315
++LLL++GADI D + + + ++ LL GA + +G L
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL-LQHGANVNAQMYSGSSAL 181
Query: 316 DRAISCRNVPVVQCFLRKGAKL 337
A +P+V+ +R GA
Sbjct: 182 HSASGRGLLPLVRTLVRSGADS 203
Score = 39.1 bits (89), Expect = 4e-04
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 275 EGLTALSWACMRGRIQAVTYLLDR--DRGAMIEHVDINGLRPLDRAISCRNVPVVQCF 330
+G T L A ++G + AV L++ G ++ + PL A+ VV+
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 59
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 54.5 bits (129), Expect = 3e-09
Identities = 43/204 (21%), Positives = 69/204 (33%), Gaps = 31/204 (15%)
Query: 162 GRTPLSLAAGRGH----MEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLA 217
G + L LA ME +R + A L + + L A + L+ A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 218 ------------------------VKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQE 253
G + H+ L T+ + T L +A+
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 254 GHVGLLELLLDKGADI-LREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGL 312
G++G++ELL+ GAD+ +E G TAL A V+ LL GA + V G
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC--GADVNRVTYQGY 179
Query: 313 RPLDRAISCRNVPVVQCFLRKGAK 336
P + + Q + +
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 47.6 bits (111), Expect = 6e-07
Identities = 11/64 (17%), Positives = 23/64 (35%)
Query: 212 SPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILR 271
+ L LAV + LL+ A +++ +P + + + L + L+
Sbjct: 147 TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 206
Query: 272 EDGE 275
E
Sbjct: 207 MLPE 210
Score = 47.2 bits (110), Expect = 7e-07
Identities = 42/196 (21%), Positives = 65/196 (33%), Gaps = 29/196 (14%)
Query: 132 ALCLFAHEGNS----EMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGAS 187
L L E+I + A ++ N+ +TPL LA E L+ AG
Sbjct: 5 FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 64
Query: 188 LGRTDTTGRCALVHAARGGHLQN------------------------LSPLMLAVKEGHW 223
D G L A G L + + L LA G+
Sbjct: 65 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 124
Query: 224 ATAEKLLQHHAPLDQTDGSH-KTPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSW 282
E L+ A ++ + + +T L +A + L+ LLL GAD+ R +G +
Sbjct: 125 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 184
Query: 283 ACMRGRIQAVTYLLDR 298
R + L
Sbjct: 185 TWGRPSTRIQQQLGQL 200
Score = 44.5 bits (103), Expect = 6e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGAS 187
AL L N ++++LLL+ A ++ QG +P L GR + L
Sbjct: 148 ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 42.2 bits (97), Expect = 3e-05
Identities = 8/50 (16%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Query: 240 DGSHKTPLMIAAQEGHVG----LLELLLDKGADILREDGEGLTALSWACM 285
DG + L +A ++ + A + ++ T L A +
Sbjct: 1 DG--DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI 48
Score = 35.6 bits (80), Expect = 0.004
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 275 EGLTALSWACMRGRIQAVTYLLDR--DRGAMIEHVDINGLRPLDRAISCRNVPVVQCF 330
+G + L A + ++ + A + + PL A+ + +
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 58
Score = 34.1 bits (76), Expect = 0.014
Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 16/111 (14%)
Query: 131 PALCLFAHEGNSEMIALLLEFHACIDLANSQ-GRTPLSLAAGRGHMEAVRTLVAAGASLG 189
L L + G ++ LL+ A ++ GRT L LA + + V L+ GA +
Sbjct: 113 TCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 172
Query: 190 RTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTD 240
R G SP L ++L Q Q
Sbjct: 173 RVTYQGY---------------SPYQLTWGRPSTRIQQQLGQLTLENLQML 208
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 48.4 bits (114), Expect = 1e-07
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 11/135 (8%)
Query: 211 LSPLMLAVKEGHWATAEKLLQHHA------PLDQTDGSHKTPLMIAAQ---EGHVGLLEL 261
L L AVK + PL +T L +A + + +++
Sbjct: 7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF 66
Query: 262 LLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISC 321
L+ ++ ++ G+G TAL + C+ + + L A IE + +G PLD A
Sbjct: 67 LVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL--LRGKASIEIANESGETPLDIAKRL 124
Query: 322 RNVPVVQCFLRKGAK 336
++ + + +
Sbjct: 125 KHEHCEELLTQALSG 139
Score = 48.4 bits (114), Expect = 1e-07
Identities = 26/148 (17%), Positives = 43/148 (29%), Gaps = 24/148 (16%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACID------LANSQGRTPLSLAA---GRGHMEAVRTLV 182
+LC + + + + T L LA R + V LV
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68
Query: 183 AAGASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGS 242
+L + G L + + LL+ A ++ + S
Sbjct: 69 QNSGNLDKQTGKGST---------------ALHYCCLTDNAECLKLLLRGKASIEIANES 113
Query: 243 HKTPLMIAAQEGHVGLLELLLDKGADIL 270
+TPL IA + H ELL +
Sbjct: 114 GETPLDIAKRLKHEHCEELLTQALSGRF 141
Score = 45.0 bits (105), Expect = 2e-06
Identities = 30/158 (18%), Positives = 41/158 (25%), Gaps = 18/158 (11%)
Query: 159 NSQGRTPLSLAAGRGHMEAVRTLVAAGASL------GRTDTTGRCALVHAARGGHLQNLS 212
+ L A + + A G L AL A R
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVD----- 57
Query: 213 PLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRE 272
+ L+Q+ LD+ G T L + L+LLL A I
Sbjct: 58 -------RTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIA 110
Query: 273 DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDIN 310
+ G T L A L G HV +
Sbjct: 111 NESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVE 148
Score = 38.0 bits (87), Expect = 5e-04
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 100 RNVYSPNVKVSRLLLLSGADANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLAN 159
R+V ++ + L+ + + + T A N+E + LLL A I++AN
Sbjct: 54 RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL--HYCCLTDNAECLKLLLRGKASIEIAN 111
Query: 160 SQGRTPLSLAAGRGHMEAVRTLVAAGA 186
G TPL +A H L A +
Sbjct: 112 ESGETPLDIAKRLKHEHCEELLTQALS 138
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 45.6 bits (106), Expect = 1e-06
Identities = 30/149 (20%), Positives = 44/149 (29%), Gaps = 17/149 (11%)
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASL-----GRTDTTGRCALVHAARGGHLQNLSPLMLAV 218
L AA G + VR L+A GA G + H + L A
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 219 KEGHWATAEKLLQHH------------APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG 266
+ A ++ D T L A + H ++ELL+ G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 267 ADILREDGEGLTALSWACMRGRIQAVTYL 295
AD+ + TA + G L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 37.1 bits (84), Expect = 0.001
Identities = 10/62 (16%), Positives = 26/62 (41%)
Query: 120 ANHITEFLGAAPALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVR 179
A+ + + AL + E++ LL+++ A + + +T ++ G+ +
Sbjct: 91 ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150
Query: 180 TL 181
L
Sbjct: 151 IL 152
Score = 26.0 bits (55), Expect = 4.9
Identities = 12/58 (20%), Positives = 20/58 (34%)
Query: 151 FHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHL 208
A ++ + T L A H E V L+ GA + + A + G+
Sbjct: 89 HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 42.0 bits (97), Expect = 1e-05
Identities = 14/129 (10%), Positives = 32/129 (24%), Gaps = 24/129 (18%)
Query: 165 PLSL---AAGRGHMEAVRTLVAAGASL------------------GRTDTTGRCALVHAA 203
PL+L ++ G + V+ ++
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 204 RGGHLQNLSPLMLAVKEGHWATAEKLLQHHA---PLDQTDGSHKTPLMIAAQEGHVGLLE 260
+PL A + + L++ A + +D +EG+ +
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120
Query: 261 LLLDKGADI 269
L +
Sbjct: 121 FLYGVQEKM 129
Score = 41.6 bits (96), Expect = 2e-05
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 211 LSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADIL 270
L+ L+ + EG + ++++ + T L A GH +++ L+ G ++
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 271 REDGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLR-PLDRAISCRN--VPVV 327
D +G T L A +Q +L+ + GA + + + ++ D+
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLV--ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119
Query: 328 QCFLRKGAKLG 338
Q K+G
Sbjct: 120 QFLYGVQEKMG 130
Score = 32.7 bits (73), Expect = 0.021
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 245 TPLMIAAQEGHVGLLELLLDKGADILREDGEGLTALSWACMRGRIQAVTYLLDRDRGAMI 304
L+ ++ EG L++ ++ + D + G +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDP--SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 305 EHVDINGLRPLDRAISCRNVPVVQCFLRKGAKLGPTTWS 343
D +G PL A SC NV V + + GA + T+S
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 99
Score = 32.3 bits (72), Expect = 0.028
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 134 CLFAHEGNSEMIALLLEFHACID-LANSQGRTPLSL--AAGRGHMEAVRTLVAAGASLG 189
A N ++ L+E A + + S +T G+ + + L +G
Sbjct: 72 HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 130
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 41.4 bits (95), Expect = 4e-05
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGGHLQNLSP---------- 213
L+ AA RG +E + +L+ ++ + GR AL G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 214 -------LMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG 266
+ A + G T + LL+ A ++ D PL +AA+EGH+ ++E L+
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 267 ADIL-REDGEGLTALSWACMRGRIQAVTYLLDR 298
A + + +G TA A + GR + V+ +
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 41.0 bits (94), Expect = 4e-05
Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 18/153 (11%)
Query: 132 ALCLFAHEGNSEMIALLLEFHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGRT 191
L A G+ E + LL+ + ++ N GRT L + A R L+ +
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKD 63
Query: 192 DTTGRCALVHAARG------------------GHLQNLSPLMLAVKEGHWATAEKLLQHH 233
T A G + NL + A + +
Sbjct: 64 RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 123
Query: 234 APLDQTDGSHKTPLMIAAQEGHVGLLELLLDKG 266
+ + + T +A G ++ L+ G
Sbjct: 124 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 30.6 bits (67), Expect = 0.14
Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 278 TALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCF 330
L+ A RG ++ +T LL + + G L +
Sbjct: 3 NELASAAARGDLEQLTSLL--QNNVNVNAQNGFGRTALQVMKLGNPEIARRLL 53
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 39.4 bits (90), Expect = 2e-04
Identities = 39/155 (25%), Positives = 55/155 (35%), Gaps = 19/155 (12%)
Query: 161 QGRTPLSLAAGRGHMEAVRTLVAA-GASLGRTDTTGRCALVHAARGGHLQNLSPLMLAVK 219
+ LS AA RG ++ VR L+ + G+ AL G L L
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60
Query: 220 EGHWATAEKLLQHHAP-----------------LDQTDGSHKTPLMIAAQEGHVGLLELL 262
T+ H A ++ DG+ P+ +A QEGH ++ L
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Query: 263 LDKGADILREDGEGLTALSWACMRGRIQAVTYLLD 297
+D+ R D GLT L A RG V L
Sbjct: 121 A-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 37.1 bits (84), Expect = 0.001
Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 17/150 (11%)
Query: 132 ALCLFAHEGNSEMIALLLEFH-ACIDLANSQGRTPLSLAAGRGHMEAVRTLVAAGASLGR 190
L A G+ + + LL D N G+T L + A+ L + +
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 191 TDTTGRCALVHAARGGHLQNLSPLML----------------AVKEGHWATAEKLLQHHA 234
+ A G + + L +
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124
Query: 235 PLDQTDGSHKTPLMIAAQEGHVGLLELLLD 264
L + D TPL +A Q G L+++L
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 29.0 bits (63), Expect = 0.60
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 278 TALSWACMRGRIQAVTYLLDRDRGAMIEHVDING 311
LS A RG +Q V LL R+ + ++ G
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRE-LVHPDALNRFG 36
Score = 27.9 bits (60), Expect = 1.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 212 SPLMLAVKEGHWATAEKLLQH 232
+PL LA++ G + L H
Sbjct: 135 TPLELALQRGAQDLVDILQGH 155
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 36.1 bits (81), Expect = 0.001
Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 18/119 (15%)
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASL------------------GRTDTTGRCALVHAARG 205
L+ AA RG +E VR L+ AGA+ R
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64
Query: 206 GHLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLD 264
P+ A +EG T L + A LD D + P+ +A + GH + L
Sbjct: 65 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 31.8 bits (70), Expect = 0.046
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 151 FHACIDLANSQGRTPLSLAAGRGHMEAVRTLVAA 184
A +D+ ++ GR P+ LA GH + R L AA
Sbjct: 91 AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124
Score = 28.8 bits (62), Expect = 0.55
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 245 TPLMIAAQEGHVGLLELLLDKGA 267
L AA G V + LL+ GA
Sbjct: 5 DWLATAAARGRVEEVRALLEAGA 27
Score = 26.5 bits (56), Expect = 2.8
Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 3/123 (2%)
Query: 213 PLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRE 272
L A G LL+ A + + + P+ + LL
Sbjct: 6 WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARV--AELLLLHGAEPNC 63
Query: 273 DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRAISCRNVPVVQCFLR 332
T ++ GA ++ D G P+D A + V + +LR
Sbjct: 64 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR-YLR 122
Query: 333 KGA 335
A
Sbjct: 123 AAA 125
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 33.3 bits (74), Expect = 0.011
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 164 TPLSLAAGRGHMEAVRTLVAAGASLGRTDTTGRCALVHAARGG----------------- 206
A G ++ V+ VA G + RT GR L +AA G
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 207 -HLQNLSPLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLE 260
+++PL+ AV EGH + + LL A T L + LL+
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 30.3 bits (66), Expect = 0.13
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 245 TPLMIAAQEGHVGLLELLLDK 265
M A + G + ++ + K
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
Score = 27.9 bits (60), Expect = 0.77
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 213 PLMLAVKEGHWATAEKLLQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADILRE 272
M A+K G + + +++T + PL AA G + +LE LL KGADI
Sbjct: 5 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 64
Query: 273 DGEGLTALSWACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPLDRA 318
D +T L A G + V LL + +GL L+
Sbjct: 65 DKHHITPLLSAVYEGHVSCVKLLLSKGA--DKTVKGPDGLTALEAT 108
Score = 26.0 bits (55), Expect = 4.2
Identities = 4/29 (13%), Positives = 7/29 (24%)
Query: 278 TALSWACMRGRIQAVTYLLDRDRGAMIEH 306
WA G + V + +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTL 32
>d2i5ha1 e.71.1.1 (A:16-195) Hypothetical protein AF1531
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 27.0 bits (60), Expect = 2.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 230 LQHHAPLDQTDGSHKTPLMIAAQEGHVGLLELLLDKGADIL 270
+ + P D+ + PL E + LLE+ + KG L
Sbjct: 10 MPYGHPDDKRPIHRREPLAQVVGERNFTLLEVSIRKGKQPL 50
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase,
N-terminal domain {Azospirillum brasilense [TaxId: 192]}
Length = 422
Score = 26.5 bits (58), Expect = 5.3
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 282 WACMRGRIQAVTYLLDRDRGAMIEHVDINGLRPL 315
+ L D ++ +D NGLRP+
Sbjct: 320 CNSVMEPWDGPAALAMTDGRWVVGGMDRNGLRPM 353
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.135 0.414
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,280,947
Number of extensions: 55294
Number of successful extensions: 396
Number of sequences better than 10.0: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 130
Length of query: 356
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 270
Effective length of database: 1,226,816
Effective search space: 331240320
Effective search space used: 331240320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.3 bits)