BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1421
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/89 (98%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/89 (96%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSE+MQQDAVDCATQA+EKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/89 (96%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSE+MQQDAVDCATQA+EKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/89 (96%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSE+MQQDAVDCATQA+EKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/89 (96%), Positives = 89/89 (100%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MSDRKAVIKNADMSE+MQQDAVDCATQA+EKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMS++MQQDA+DCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M DRKAVIKNADMSEEMQQD+V+CATQALEKYNIEKDIAA+IKKEFDKKYNPTWHCIVGR
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/89 (93%), Positives = 88/89 (98%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MS+RKAVIKNADM E+MQQDAVDCATQALEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGR
Sbjct: 1 MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
NFGSYVTHET+HFIYFYLGQVA+LLFKSG
Sbjct: 61 NFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/85 (95%), Positives = 84/85 (98%)
Query: 5 KAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
KAVIKNADMSEEMQ DAVDCATQALEKYNIEKDIAAYIKKEFD+K+NPTWHCIVGRNFGS
Sbjct: 7 KAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGS 66
Query: 65 YVTHETRHFIYFYLGQVAILLFKSG 89
YVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 67 YVTHETKHFIYFYLGQVAILLFKSG 91
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 76/84 (90%)
Query: 6 AVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSY 65
AVIK DMSE+MQQ+A+ A QA+EK+ IEKDIAA+IK+EFDKK++PTWHCIVGRNFGS+
Sbjct: 2 AVIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSF 61
Query: 66 VTHETRHFIYFYLGQVAILLFKSG 89
VTHE+RHFIYFYLG VA LLFKSG
Sbjct: 62 VTHESRHFIYFYLGTVAFLLFKSG 85
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 77/89 (86%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
M +RKAVIKNADM E+MQ+ AV A AL+KY IEKD+AAYIKKEFD+KYNP WHCIVG+
Sbjct: 1 MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGK 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
+FGSYVTHET+HFIYFYL + A LLFKSG
Sbjct: 61 HFGSYVTHETQHFIYFYLQERAFLLFKSG 89
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 79/89 (88%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MS+RKAVIKNADMSEEMQ+DA+ A A++K+++EKDIAA IKK+FD+KY+PTWHCIVGR
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKDFDRKYHPTWHCIVGR 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
+FGSYVTHET +FIYFYL A LLFKSG
Sbjct: 61 HFGSYVTHETHNFIYFYLDDRAFLLFKSG 89
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 71/81 (87%)
Query: 8 IKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 67
IK+ DMSE+MQQ+AV+ A +A+EKY+IEKDIA YIK+EFD + TWHC+VGRNFGS+VT
Sbjct: 13 IKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFGSFVT 72
Query: 68 HETRHFIYFYLGQVAILLFKS 88
HET+HFIYFYLG AILLFK+
Sbjct: 73 HETKHFIYFYLGHCAILLFKT 93
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 74/91 (81%), Gaps = 2/91 (2%)
Query: 1 MSDRKAVI--KNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV 58
MS K +I KNADM + MQQDA +C +A E+ NIE+DIA IKKEFDKKY+PTWHCIV
Sbjct: 1 MSSNKYIINVKNADMPDFMQQDATECTIKAFEETNIERDIAMIIKKEFDKKYSPTWHCIV 60
Query: 59 GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
G++FGS+VTHET++FIYF + + ++LLFK+G
Sbjct: 61 GKSFGSFVTHETKNFIYFNINKHSVLLFKAG 91
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 64/87 (73%)
Query: 3 DRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62
+++ ++K +D+ EEMQ + + +A+ Y IEKDIA Y+KKE D+ Y TWH IVG++F
Sbjct: 5 EQEPILKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIVGKSF 64
Query: 63 GSYVTHETRHFIYFYLGQVAILLFKSG 89
GSYVTHE F YFY+GQ+A L+FKSG
Sbjct: 65 GSYVTHEQGFFTYFYIGQLAFLIFKSG 91
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 67/87 (77%)
Query: 3 DRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62
+ A++K +D+++E++ + + QA+E++ +E+++AAYIKKE D K+ TWH IVG+NF
Sbjct: 2 SKPAILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNF 61
Query: 63 GSYVTHETRHFIYFYLGQVAILLFKSG 89
GSYVTHE HFIYFY+G +A L+FK+
Sbjct: 62 GSYVTHEKGHFIYFYIGPLAFLVFKTA 88
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Query: 1 MSDRK---AVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCI 57
MSD ++K +D+++++++D + + AL+KY +E+DIA +KK+ D KY TWH I
Sbjct: 1 MSDENKSTPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVI 60
Query: 58 VGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
VG+NFGSYVTHE HF+YFY+G +A L+FK+
Sbjct: 61 VGKNFGSYVTHEKGHFVYFYIGPLAFLVFKTA 92
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 64/84 (76%)
Query: 5 KAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
+ ++K +DM +EMQQ+ A +A+ ++ +E++IA+ IKKE D +Y TWH IVGR+FGS
Sbjct: 3 QVIVKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGS 62
Query: 65 YVTHETRHFIYFYLGQVAILLFKS 88
YVTHE F+YFY+G +A+L+FK+
Sbjct: 63 YVTHEKGKFVYFYVGPLALLVFKT 86
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%)
Query: 5 KAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
K V+K +D+++E++ + + ++ A Y +E++IAAYIKK+ D TWH IVG+NFGS
Sbjct: 3 KPVLKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGS 62
Query: 65 YVTHETRHFIYFYLGQVAILLFKSG 89
YVTHE +F+YFY+G +A L+FK+
Sbjct: 63 YVTHEKGYFVYFYIGPLAFLVFKTA 87
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGR 60
MS+ K +K DM + + + +A YNI+KD+AA++K+E DKK+ TWH I G+
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGK 60
Query: 61 NFGSYVTHETRHFIYFYLGQVAILLFKSG 89
FGS V++E HFI +V ++++K G
Sbjct: 61 CFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 13 MSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPT-------WHCIVGRNFGSY 65
M E +QDAV A A++KY KDIA YIK E+DKKY + +HCIVG++F S
Sbjct: 28 MPESFEQDAVQIALIAVDKYRQLKDIAFYIKHEYDKKYPGSGKATEGVYHCIVGKSFASA 87
Query: 66 VTHETRHFIYFYLGQVAILLFKS 88
V+HETR FI+ + ++L+KS
Sbjct: 88 VSHETRQFIHMKVDTYHVILWKS 110
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 6 AVIKNADMSEEMQQDAVDCATQALEKY-NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
+++++DM EEM+ + ++ A EK+ N + A IK+ DKK+ +WH ++G FG
Sbjct: 20 PLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 65 YVTHETRHFIYFYL-GQVAILLFK 87
+THE ++ +Y Y G +A+ ++K
Sbjct: 80 EITHEVKNLLYLYFGGTLAVCVWK 103
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 6 AVIKNADMSEEMQQDAVDCATQALEKY-NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
+++++DM EEM+ + ++ A EK+ N + A IK+ DKK+ +WH ++G FG
Sbjct: 20 PLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 65 YVTHETRHFIYFYL-GQVAILLFK 87
+THE ++ +Y Y G +A+ ++K
Sbjct: 80 EITHEVKNLLYLYFGGTLAVCVWK 103
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 6 AVIKNADMSEEMQQDAVDCATQALEKY-NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
+++++DM EEM+ + ++ A EK+ N + A IK+ DKK+ +WH ++G FG
Sbjct: 20 PLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 65 YVTHETRHFIYFYL-GQVAILLFK 87
+THE ++ +Y Y G +A+ ++K
Sbjct: 80 EITHEVKNLLYLYFGGTLAVCVWK 103
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 6 AVIKNADMSEEMQQDAVDCATQALEKY-NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
+++++DM EEM+ + ++ A EK+ N + A IK+ DKK+ +WH ++G FG
Sbjct: 20 PLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 65 YVTHETRHFIYFYL-GQVAILLFK 87
+THE ++ +Y Y G +A+ ++K
Sbjct: 80 EITHEVKNLLYLYFGGTLAVCVWK 103
>sp|P61521|ASSY_CORDI Argininosuccinate synthase OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=argG PE=3
SV=1
Length = 399
Score = 32.3 bits (72), Expect = 0.98, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKK-----YNPTWH 55
+ DR IK+ ++ E A+ A QA+E IE+++A Y K+ D + Y+ W+
Sbjct: 258 VEDRLVGIKSREVYEAPGAIALITAHQAMEDVTIERELARY-KRGIDARWSEEVYDGLWY 316
Query: 56 CIVGRNFGSYVTHETRH 72
+ R+ +++ + H
Sbjct: 317 APLKRSLDAFIENTQEH 333
>sp|A0LUB9|ASSY_ACIC1 Argininosuccinate synthase OS=Acidothermus cellulolyticus (strain
ATCC 43068 / 11B) GN=argG PE=3 SV=1
Length = 401
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKK-----YNPTWH 55
+ DR IK+ ++ E A+ A Q LE +E+D+A + K+ D++ Y+ W
Sbjct: 257 VEDRLVGIKSREVYEAPGAVALITAHQELENVTVERDLARF-KRLVDQRWAELVYDGLWF 315
Query: 56 CIVGRNFGSYVTHETRH 72
+ R +++ RH
Sbjct: 316 SPLKRALDAFIDTAQRH 332
>sp|Q0VMV4|SURA_ALCBS Chaperone SurA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651
/ DSM 11573) GN=surA PE=3 SV=1
Length = 435
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 8 IKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKY 50
I++ADMS E ++ ATQAL+K E+++ +++++ + Y
Sbjct: 391 IRDADMSTEFRRMQ---ATQALQKRRFEEELETWVQEKRSESY 430
>sp|P45575|DSVB_DESVH Sulfite reductase, dissimilatory-type subunit beta
OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=dsvB PE=1 SV=3
Length = 381
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 32 YNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHE 69
YN EK +A I +K++ + ++ +NFGS++ HE
Sbjct: 8 YNPEKPMANRITDIGPRKFDEFFPPVIAKNFGSWLYHE 45
>sp|B0VBU8|DCHS_ACIBY Histidine decarboxylase OS=Acinetobacter baumannii (strain AYE)
GN=hdc PE=3 SV=1
Length = 383
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 20 DAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV-----GRNFGSYVTHE 69
D D + AL ++ EKD+ AY + F + +W + G FG Y+ E
Sbjct: 52 DWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARE 106
>sp|B7I459|DCHS_ACIB5 Histidine decarboxylase OS=Acinetobacter baumannii (strain AB0057)
GN=hdc PE=3 SV=1
Length = 383
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 20 DAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV-----GRNFGSYVTHE 69
D D + AL ++ EKD+ AY + F + +W + G FG Y+ E
Sbjct: 52 DWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARE 106
>sp|B7GZJ8|DCHS_ACIB3 Histidine decarboxylase OS=Acinetobacter baumannii (strain
AB307-0294) GN=hdc PE=3 SV=1
Length = 383
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 20 DAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV-----GRNFGSYVTHE 69
D D + AL ++ EKD+ AY + F + +W + G FG Y+ E
Sbjct: 52 DWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARE 106
>sp|B2HVG6|DCHS_ACIBC Histidine decarboxylase OS=Acinetobacter baumannii (strain ACICU)
GN=hdc PE=3 SV=1
Length = 383
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 20 DAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV-----GRNFGSYVTHE 69
D D + AL ++ EKD+ AY + F + +W + G FG Y+ E
Sbjct: 52 DWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARE 106
>sp|A3M7A4|DCHS_ACIBT Histidine decarboxylase OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=hdc PE=3 SV=2
Length = 383
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 20 DAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV-----GRNFGSYVTHE 69
D D + AL ++ EKD+ AY + F + +W + G FG Y+ E
Sbjct: 52 DWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARE 106
>sp|Q4WPG0|GPI10_ASPFU GPI mannosyltransferase 3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gpi10
PE=3 SV=1
Length = 771
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 45 EFDKKYNPTWHCIVGRNFGSYVTHETRH 72
EF + P W G N G+++T E RH
Sbjct: 77 EFFQSLEPAWQIAFGENQGAWITWEWRH 104
>sp|Q4L4X7|ASSY_STAHJ Argininosuccinate synthase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=argG PE=3 SV=1
Length = 400
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAY---IKKEF-DKKYNPTWHC 56
+ +R A IK+ ++ E + + A +ALE + KD+A + I+K+F ++ YN W
Sbjct: 257 VENRLAGIKSREIYETPGAEVILKAHKALETLTLTKDVAHFKPVIEKQFAEQTYNGLWFS 316
Query: 57 IVGRNFGSYVTHETRHFIYFYLGQVAILLFKS 88
+ + ++ T+ ++ G V I LFK
Sbjct: 317 PLTDSLKLFI-DSTQQYVE---GDVRIKLFKG 344
>sp|B9DIU4|ASSY_STACT Argininosuccinate synthase OS=Staphylococcus carnosus (strain
TM300) GN=argG PE=3 SV=1
Length = 401
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAY---IKKEF-DKKYNPTWHC 56
+ +R IK+ ++ E + + A +ALE + KD+A + I+K+F ++ YN W
Sbjct: 257 VENRLVGIKSREIYETPGAEVILKAHKALETITLTKDVAHFKPVIEKQFAEQTYNGLWFS 316
Query: 57 IVGRNFGSYVTHETRHFIYFYLGQVAILLFKS 88
+ + ++ H G V + LFK
Sbjct: 317 PLTDSLKLFIDSTQEHVT----GDVRVKLFKG 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,804,890
Number of Sequences: 539616
Number of extensions: 1140897
Number of successful extensions: 3276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3236
Number of HSP's gapped (non-prelim): 53
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)