BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14210
(312 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|1405329|dbj|BAA10935.1| nurse shark LMPX [Ginglymostoma cirratum]
Length = 259
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 18/236 (7%)
Query: 78 DHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCG---------PFSQSSTVPHNTSFQV 128
D L+P Q SGD E+LH T G R + S V T +V
Sbjct: 30 DFLLAPGGQHGEQESGSGDRIEILHGTTTLGFRFAHGVIVAVDSRATAGSYVASQTVKKV 89
Query: 129 IPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGN 188
I ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL NMV +Y+
Sbjct: 90 IEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK--- 146
Query: 189 HSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRP 248
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD YR
Sbjct: 147 -----GMGLSMGTMICGWDK-RGPGLYYVDSEGNRVSGQIFSVGSGSVYAYGVLDRAYRH 200
Query: 249 DLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
D+S EAY LA AIYHA RD +SGG V LY + GW ++ DV D++ K+
Sbjct: 201 DMSPTEAYELAKQAIYHATYRDAYSGGIVSLYHVKETGWVRICRDDVMDLHQKYKD 256
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTLGFR+ G+I+A DSRATA + SQ + K +
Sbjct: 52 ILHGTTTLGFRFAHGVIVAVDSRATAGSYVASQTVKKVIE 91
>gi|194885021|ref|XP_001976373.1| GG20051 [Drosophila erecta]
gi|190659560|gb|EDV56773.1| GG20051 [Drosophila erecta]
Length = 390
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 18/196 (9%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N+ +
Sbjct: 101 TMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A +D+ GP+L +D+ G+ G F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGFDD-EGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN--- 300
T YR DLS++EAY LA AIYHA +D +SGG VRLY IN +GW+ + + D D+++
Sbjct: 212 TGYRHDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHINSEGWRNICNTDCSDLHDSYC 271
Query: 301 ------DRKEAPPGGG 310
+ K+ P GG
Sbjct: 272 SSGCPGNEKDPPNEGG 287
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+IL DSRAT+ I SQ + K +
Sbjct: 68 FDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVE 107
>gi|194756128|ref|XP_001960331.1| GF13303 [Drosophila ananassae]
gi|190621629|gb|EDV37153.1| GF13303 [Drosophila ananassae]
Length = 314
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N
Sbjct: 97 IGSQTMKKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ +Y+ GL G ++A YD+ GP+L +D+ G+ G F VGSG+ YA
Sbjct: 157 ISNEYKG--------MGLVMGMMLAGYDD-EGPKLIYVDSEGMKSSGLVFSVGSGSPYAL 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT YR DL+++EAY LA AIYHA +D +SGG VRLY IN +GW+ + + D D++
Sbjct: 208 GVLDTGYRYDLTDQEAYDLAKRAIYHATSKDAYSGGIVRLYHINAEGWRNICNTDCADLH 267
Query: 300 N 300
+
Sbjct: 268 D 268
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G+IL DSRAT+ I SQ + K +
Sbjct: 68 FAHGTTTLGFKFQGGVILCADSRATSGQYIGSQTMKKIVE 107
>gi|380021709|ref|XP_003694700.1| PREDICTED: proteasome subunit beta type-5-like [Apis florea]
Length = 282
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 115/196 (58%), Gaps = 17/196 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNYKG--------MGLSIGMMLAGWDK-RGPSLYYVDSEGARTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA LD+ YR DLS+EEAY L +IYHA RD +SGG VR+Y I GW +
Sbjct: 203 GSGSIYAFGTLDSGYRWDLSDEEAYELGKRSIYHATHRDAYSGGIVRVYHIKPTGWVHIS 262
Query: 292 SRDVKDI---YNDRKE 304
D KD+ Y ++KE
Sbjct: 263 DEDCKDLHYMYQEQKE 278
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GIILA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVE 110
>gi|195489076|ref|XP_002092584.1| GE11586 [Drosophila yakuba]
gi|194178685|gb|EDW92296.1| GE11586 [Drosophila yakuba]
Length = 315
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N
Sbjct: 97 IGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ +Y+ GL G ++A +D+ GP+L +D+ G+ G F VGSG+ YA
Sbjct: 157 ISTEYKG--------MGLVMGMMLAGFDD-EGPKLIYVDSDGMRSHGLVFSVGSGSPYAL 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT YR DLS++EAY LA AIYHA +D +SGG VRLY IN +GW+ + + D D++
Sbjct: 208 GVLDTGYRHDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHINSEGWRNICNTDCSDLH 267
Query: 300 N 300
+
Sbjct: 268 D 268
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+IL DSRAT+ I SQ + K +
Sbjct: 68 FDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVE 107
>gi|195347018|ref|XP_002040051.1| GM15565 [Drosophila sechellia]
gi|194135400|gb|EDW56916.1| GM15565 [Drosophila sechellia]
Length = 315
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 113/176 (64%), Gaps = 9/176 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N+ +
Sbjct: 101 TMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A +D+ GP+L +D+ G++ G F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGFDD-EGPKLIYVDSEGMISHGQVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
T YR DLS++EAY LA AIYHA +D +SGG VRLY I+ +GW+ + + D D++
Sbjct: 212 TGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLH 267
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+IL DSRAT+ I SQ + K +
Sbjct: 68 FDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVE 107
>gi|307195303|gb|EFN77251.1| Proteasome subunit beta type-5 [Harpegnathos saltator]
Length = 287
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 17/199 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R ++I
Sbjct: 98 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISIA 152
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 153 AASKLLSNMIYNYK--------GMGLSIGMMLAGWDK-RGPGLYYVDSEGTRTPGKVFSV 203
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD+ Y+ DL++EEAY L +IYHA RD +SGG +R+Y + GW +
Sbjct: 204 GSGSVFAFGVLDSGYKWDLTDEEAYELGRRSIYHATHRDAYSGGIIRVYHMKSTGWVHIS 263
Query: 292 SRDVKDI---YNDRKEAPP 307
D KD+ Y+ KE P
Sbjct: 264 DEDSKDLHYAYHAEKEIQP 282
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GIILA DSRAT I S + K +
Sbjct: 72 FDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVE 111
>gi|321469684|gb|EFX80663.1| hypothetical protein DAPPUDRAFT_303852 [Daphnia pulex]
Length = 276
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC YW L+K+C+ YE + + +++ A+ LLVNMV Y+
Sbjct: 102 KIIEINDFLLGTMAGGAADCTYWERVLSKQCRLYELRNKERISVAAASKLLVNMVYNYK- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A +D+ GP LY +DN G G F VGSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSMGVMIAGWDK-KGPGLYYVDNDGTRTPGQVFSVGSGSLYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+PDL++EEAY L AIYHA RD SGG +R+Y I GW ++ +D +++ +EA
Sbjct: 213 KPDLTDEEAYELGRRAIYHATYRDASSGGIIRVYHIKSTGWVKISEQDCTELHYQYEEA 271
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y GI+LA DSRAT I S + K +
Sbjct: 69 GTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIE 105
>gi|328787761|ref|XP_394680.3| PREDICTED: proteasome subunit beta type-5-like [Apis mellifera]
Length = 282
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 17/196 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNYKG--------MGLSIGMMLAGWDK-RGPSLYYVDSEGARTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA LD+ YR DLS+EEAY L +IYHA RD +SGG VR+Y I GW +
Sbjct: 203 GSGSIYAFGTLDSGYRWDLSDEEAYQLGKRSIYHATHRDAYSGGIVRVYHIKPTGWVHIS 262
Query: 292 SRDVKDI---YNDRKE 304
D K++ Y ++KE
Sbjct: 263 DEDCKELHYMYQEQKE 278
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GIILA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVE 110
>gi|350409192|ref|XP_003488646.1| PREDICTED: proteasome subunit beta type-5-like [Bombus impatiens]
Length = 282
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 115/197 (58%), Gaps = 17/197 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNYK--------GMGLSIGMMLAGWDK-RGPSLYYVDSEGARTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA LD+ YR DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 203 GSGSIYAFGALDSGYRWDLTDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHIS 262
Query: 292 SRDVKDI---YNDRKEA 305
D KD+ Y D+K+
Sbjct: 263 DEDCKDLHYMYQDQKQG 279
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GI+LA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYRGGIVLAVDSRATGGQFIGSSTMKKIVE 110
>gi|340712774|ref|XP_003394930.1| PREDICTED: proteasome subunit beta type-5-like [Bombus terrestris]
Length = 282
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 115/197 (58%), Gaps = 17/197 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNYK--------GMGLSIGMMLAGWDK-RGPSLYYVDSEGARTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA LD+ YR DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 203 GSGSIYAFGALDSGYRWDLTDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHIS 262
Query: 292 SRDVKDI---YNDRKEA 305
D KD+ Y D+K+
Sbjct: 263 DEDCKDLHYMYQDQKQG 279
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GI+LA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYRGGIVLAVDSRATGGQFIGSSTMKKIVE 110
>gi|18447060|gb|AAL68121.1| AT21741p [Drosophila melanogaster]
Length = 315
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 9/177 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N+ +
Sbjct: 101 TMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A +D+ GP+L +D+ G+ G F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGFDD-EGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
T YR DLS++EAY LA AIYHA +D +SGG VRLY I+ +GW+ + + D D+++
Sbjct: 212 TGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLHD 268
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+IL DSRAT+ I SQ + K +
Sbjct: 68 FDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVE 107
>gi|20130281|ref|NP_611776.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|7291554|gb|AAF46978.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|201066095|gb|ACH92457.1| FI08137p [Drosophila melanogaster]
Length = 315
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 9/177 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ ++ +YR MT+ AA ++ N+ +
Sbjct: 101 TMRKIVELNDYMLGTLAGGAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A +D+ GP+L +D+ G+ G F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGFDD-EGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
T YR DLS++EAY LA AIYHA +D +SGG VRLY I+ +GW+ + + D D+++
Sbjct: 212 TGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHIHSEGWRNICNTDCSDLHD 268
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+IL DSRAT+ I SQ + K +
Sbjct: 68 FDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVE 107
>gi|332021182|gb|EGI61567.1| Proteasome subunit beta type-5 [Acromyrmex echinatior]
Length = 286
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LA++C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ ++ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNFK--------GMGLSIGMMLAGWDK-RGPGLYYVDSEGTRTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD+ YR DL++E+AY L AIYHA RD +SGG +R+Y + GW +
Sbjct: 203 GSGSVFAFGVLDSGYRWDLTDEQAYELGRRAIYHATHRDAYSGGIIRVYHMKSTGWVHIS 262
Query: 292 SRDVKDI---YNDRKEAPP 307
+D KD+ Y+ K A P
Sbjct: 263 DQDSKDLHYAYHADKSAEP 281
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GIILA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVE 110
>gi|383850454|ref|XP_003700810.1| PREDICTED: proteasome subunit beta type-5-like [Megachile
rotundata]
Length = 282
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 14/198 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R M+I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRTYELRNRERMSIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NMV Y+ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMVYTYK--------GMGLSMGMMLAGWDK-RGPGLYYVDSEGTRTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA LD+ Y DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 203 GSGSIYAFGTLDSGYSWDLTDEEAYELGRRSIYHATHRDAYSGGIVRVYHMKSTGWVHIS 262
Query: 292 SRDVKDIYNDRKEAPPGG 309
D KD++ +E G
Sbjct: 263 DEDCKDLHYMYQEQKTKG 280
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y GIILA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVE 110
>gi|321470713|gb|EFX81688.1| hypothetical protein DAPPUDRAFT_303318 [Daphnia pulex]
Length = 277
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC YW L+K+C+ YE + + +++ A+ LLVNMV Y+
Sbjct: 103 KIIEINDFLLGTMAGGAADCTYWERVLSKQCRLYELRNKERISVAAASKLLVNMVYNYK- 161
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A +D+ GP LY +DN G G F VGSG+ YA +LD+ Y
Sbjct: 162 -------GMGLSMGVMIAGWDK-KGPGLYYVDNDGTRTPGQVFSVGSGSLYAYGVLDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS+EEAY L AIYHA RD SGG +R+Y I GW ++ +D +++ +EA
Sbjct: 214 RNDLSDEEAYELGRRAIYHATYRDASSGGIIRVYHIKSTGWVKISEQDCTELHYQYEEA 272
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y GI+LA DSRAT I S + K +
Sbjct: 70 GTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIE 106
>gi|332373358|gb|AEE61820.1| unknown [Dendroctonus ponderosae]
Length = 279
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 17/197 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S T+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R +++
Sbjct: 92 GQFIGSQTMK-----KIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVA 146
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L+ NMV Y+ GLS G ++A +D+ GPQLY +D+ G G F V
Sbjct: 147 AASKLMSNMVYNYK--------GMGLSMGMMLAGWDK-RGPQLYYIDSEGARTPGKIFSV 197
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ Y+ DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 198 GSGSVYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKQTGWVHID 257
Query: 292 SRDVKDI---YNDRKEA 305
+ D D+ Y + KEA
Sbjct: 258 NNDCTDLHYKYQEEKEA 274
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y G++LA DSRAT I SQ + K +
Sbjct: 66 FDHGTTTLGFMYQGGVVLAVDSRATGGQFIGSQTMKKIVE 105
>gi|290992091|ref|XP_002678668.1| predicted protein [Naegleria gruberi]
gi|284092281|gb|EFC45924.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC +W L +C+ YE + + +++ A+ LL N+V +Y+
Sbjct: 117 KVIEINPYLLGTMAGGAADCQFWERYLGMQCRLYELRNKRRISVAAASKLLSNIVYQYK- 175
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+GLS GT++A +D GP L+M+DN G ++GT+F VGSG+ YA +LD Y
Sbjct: 176 -------DHGLSMGTMIAGWDHT-GPNLFMVDNDGTRLKGTRFSVGSGSLYAYGVLDQGY 227
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAP 306
R DL+EEEA L AIYHA RD +SGG + +Y I GW ++ S D+ +++ K AP
Sbjct: 228 RADLTEEEACELGRRAIYHATHRDAYSGGIINVYLIRSDGWTKISSTDMNELHYG-KYAP 286
Query: 307 PGG 309
G
Sbjct: 287 EKG 289
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTLGF + +GI++A DSRA+ + I SQ + K +
Sbjct: 81 YAKGTTTLGFVFNKGIVIAVDSRASMGNYISSQNVKKVIE 120
>gi|170065467|ref|XP_001867951.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
gi|167882529|gb|EDS45912.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
Length = 263
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 12/192 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ +L TLAG AADCVYW LAKEC+ YE + + +++ A+ ++ N
Sbjct: 80 IGSQTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSN 139
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS G ++A YD+ GPQLY +D+ G G F VGSG+ YA
Sbjct: 140 IVYYYKG--------MGLSMGMMLAGYDK-RGPQLYYIDSEGTRTPGKVFSVGSGSIYAY 190
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI- 298
+LD+ YR DLS+E+A L AIYHA RD +SGG VR+Y I GW + ++D D+
Sbjct: 191 GVLDSGYRWDLSDEDAQDLGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLH 250
Query: 299 --YNDRKEAPPG 308
Y D K+ G
Sbjct: 251 FKYQDEKKQKFG 262
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFR+ G+ILA DSRAT I SQ + K +
Sbjct: 51 FDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVE 90
>gi|322791530|gb|EFZ15921.1| hypothetical protein SINV_10172 [Solenopsis invicta]
Length = 292
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LA++C+ YE + R ++I
Sbjct: 104 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIA 158
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ ++ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 159 AASKLLSNMIYNFK--------GMGLSIGMMLAGWDK-RGPGLYYVDSEGTRTPGKVFSV 209
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD+ YR DL++E+AY L +IYHA RD +SGG +R+Y + GW +
Sbjct: 210 GSGSVFAFGVLDSGYRWDLTDEQAYELGRRSIYHATHRDAYSGGIIRVYHMKSTGWVHIS 269
Query: 292 SRDVKDI---YNDRKEAPP 307
+D KD+ Y+ K A P
Sbjct: 270 DQDSKDLHYAYHADKLAEP 288
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY GIILA DSRAT I S + K +
Sbjct: 78 FDHGTTTLGFRYQGGIILAVDSRATGGQFIGSSTMKKIVE 117
>gi|209732230|gb|ACI66984.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 276
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V +VI ++ +L T++G+AADCVYW LAKEC+ Y + + +++ A+
Sbjct: 93 SAGSYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYNLRNKERISVSAAS 152
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV YR GLS GT++ +D+ GP LY +D+ GL + G F GSG
Sbjct: 153 KLLANMVVNYRG--------MGLSMGTMICGWDK-KGPGLYYVDDNGLRLCGNMFSTGSG 203
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DLS EAY LA AI+HA RD +SGG V +Y + GW +V D
Sbjct: 204 NTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQED 263
Query: 295 VKDI----YNDRK 303
V D+ YND+K
Sbjct: 264 VGDLYHRFYNDKK 276
>gi|66800081|ref|XP_628966.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
gi|74896741|sp|Q54BC8.1|PSB5_DICDI RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|60462347|gb|EAL60569.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
Length = 272
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 25/237 (10%)
Query: 79 HFLSPP-------LSQSSQHIISGDSCELLHP------VYTGGERCGPFSQSSTVPHNTS 125
HF PP L ++ H + + E H VY GG S+S+ P+ S
Sbjct: 31 HFELPPNANPGDFLRETFDHPSAPKALEFAHGTTTLAFVYGGGIIVSVDSKSTQGPYVAS 90
Query: 126 F---QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
+VI ++ ++L T+AG AADC +W L + C+ YE + + +++ A+ +L N+V
Sbjct: 91 RSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVY 150
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
Y+ GLS GT++ +D+ GPQLY +DN G + G +F GSG+ YA +L
Sbjct: 151 SYKG--------YGLSMGTMITGWDKT-GPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVL 201
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
DT ++ D+++EEAY L A+YHA RD +SGG + +Y + GW+++ S D +Y
Sbjct: 202 DTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDDCFKLY 258
>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
castaneum]
Length = 279
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 114/195 (58%), Gaps = 17/195 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S T+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R +++
Sbjct: 92 GQFIGSQTMK-----KIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVA 146
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L+ NMV Y+ GLS G ++A +D+ GPQLY +D+ G G F V
Sbjct: 147 AASKLMANMVYNYK--------GMGLSMGMMLAGWDK-RGPQLYYVDSEGTRTPGKVFSV 197
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ Y+ DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 198 GSGSIYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHID 257
Query: 292 SRDVKDI---YNDRK 303
+ D D+ Y D K
Sbjct: 258 NNDCMDLHYKYQDEK 272
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y G++LA DSRAT I SQ + K +
Sbjct: 66 FDHGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVE 105
>gi|223646804|gb|ACN10160.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223672663|gb|ACN12513.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 303
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V +VI ++ +L T++G+AADCVYW LAKEC+ Y + + +++ A+
Sbjct: 120 SAGSYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYNLRNKERISVSAAS 179
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV YR GLS GT++ +D+ GP LY +D+ GL + G F GSG
Sbjct: 180 KLLANMVVNYRG--------MGLSMGTMICGWDK-KGPGLYYVDDNGLRLCGNMFSTGSG 230
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DLS EAY LA AI+HA RD +SGG V +Y + GW +V D
Sbjct: 231 NTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQED 290
Query: 295 VKDI----YNDRK 303
V D+ YND+K
Sbjct: 291 VGDLYHRFYNDKK 303
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKEC 157
+VI ++ +L T++G+AADCVYW LAKEC
Sbjct: 4 KVIEINPFLLGTMSGSAADCVYWERVLAKEC 34
>gi|157135040|ref|XP_001663403.1| proteasome subunit beta type 5,8 [Aedes aegypti]
gi|108870309|gb|EAT34534.1| AAEL013236-PA [Aedes aegypti]
Length = 282
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 42/294 (14%)
Query: 43 SLGDSCELLHPVYTGGERCGQSYSQRSHCVAETQQDHFLS---PPLSQSSQHII------ 93
+L D C L G + QR ++ + S PP + ++++
Sbjct: 2 ALADVCGLPTGSLMSGAPMDHQFFQRDLALSSQNLHNSFSLAVPPFQEPAENLAKLQAHG 61
Query: 94 --SGDSCELLHPVYTGGERC--------------GPFSQSSTVPHNTSFQVIPVSSSILC 137
SG E H T G R G F S T+ +++ ++ +L
Sbjct: 62 ESSGIKMEFDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMK-----KIVEINDYLLG 116
Query: 138 TLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGL 197
TLAG AADCVYW LAKEC+ YE + + +++ A+ ++ N+V Y+ GL
Sbjct: 117 TLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSNIVYYYKG--------MGL 168
Query: 198 SFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYA 257
S G ++A YD+ GPQLY +D+ G G F VGSG+ YA +LD+ Y+ DL++EEA
Sbjct: 169 SMGMMLAGYDK-RGPQLYYIDSEGTRTPGKVFSVGSGSIYAYGVLDSGYKWDLTDEEAQD 227
Query: 258 LATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI---YNDRKEAPPG 308
L AIYHA RD +SGG VR+Y I GW + ++D D+ Y D K+ G
Sbjct: 228 LGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLHFKYQDEKQQKFG 281
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFR+ G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVE 109
>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
Length = 276
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W +L +C+ YE + + +T+ A+ LL N
Sbjct: 92 IASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMQCRLYELRNKKRITVASASKLLAN 151
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ YR GLS GT++ +DE GPQLY +D+ G + G F VGSG+ YA
Sbjct: 152 TMSSYR--------GYGLSMGTMITGWDET-GPQLYYVDDDGTRLHGRYFSVGSGSTYAY 202
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT YRPDL+ EEA L AIYHAC RD SG LY + GW ++ + DV D++
Sbjct: 203 GVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDVNDMH 262
>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
Length = 257
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ +L TLAG AADCVYW LAKEC+ YE + + +++ A+ ++ N
Sbjct: 70 IGSQTMKKIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVAAASKIMSN 129
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS G ++A YD+ GPQLY +D+ G G F VGSG+ YA
Sbjct: 130 IVYYYK--------GMGLSMGMMLAGYDK-RGPQLYYIDSEGTRTPGKVFSVGSGSIYAY 180
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI- 298
+LD+ Y DL++EEA L AIYHA RD +SGG VR+Y I GW + ++D D+
Sbjct: 181 GVLDSGYHWDLTDEEAQDLGRRAIYHATHRDAYSGGIVRVYHIKPTGWVNISNQDCMDLH 240
Query: 299 --YNDRKEAPPGG 309
+ + KE GG
Sbjct: 241 FQFKEEKEKKFGG 253
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFR+ G+ILA DSRAT I SQ + K +
Sbjct: 41 FDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVE 80
>gi|259089301|ref|NP_001158688.1| Proteasome subunit beta type 8 [Oncorhynchus mykiss]
gi|225705888|gb|ACO08790.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V +VI ++ +L T++G+AADCVYW LAKEC+ Y+ + + +++ A+
Sbjct: 93 SAGSYVSTQMFKKVIEINPFLLGTMSGSAADCVYWERVLAKECRIYKLRNKERISVSAAS 152
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV YR GLS GT++ +D+ GP LY +D+ GL + G F GSG
Sbjct: 153 KLLANMVVNYRG--------MGLSMGTMICGWDK-KGPGLYYVDDNGLRLCGNMFSTGSG 203
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DLS EAY LA AI+HA RD +SGG V +Y + GW +V D
Sbjct: 204 NTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQED 263
Query: 295 VKDIYN 300
V D+Y+
Sbjct: 264 VGDLYH 269
>gi|307182515|gb|EFN69722.1| Proteasome subunit beta type-5 [Camponotus floridanus]
Length = 286
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F SST+ +++ ++ +L TLAG AADCVYW LA++C+ YE + R ++I
Sbjct: 97 GQFIGSSTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLARQCRMYELRNRERISIA 151
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NM+ ++ GLS G ++A +D+ GP LY +D+ G G F V
Sbjct: 152 AASKLLSNMIYNFK--------GMGLSIGMMLAGWDK-RGPGLYYVDSEGTRTPGKVFSV 202
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD+ YR DL++E+AY L +IYHA RD +SGG +R+Y + GW +
Sbjct: 203 GSGSVFAFGVLDSGYRWDLTDEQAYELGRRSIYHATHRDAYSGGIIRVYHMKSTGWVHIS 262
Query: 292 SRDVKDIY 299
+D KD++
Sbjct: 263 DQDSKDLH 270
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY GI+LA DSRAT I S + K +
Sbjct: 71 FDHGTTTLGFRYQGGIVLAVDSRATGGQFIGSSTMKKIVE 110
>gi|2851557|sp|P34065.2|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain chain 1; AltName: Full=Multicatalytic
endopeptidase complex chain 1; AltName: Full=Proteasome
chain 1; AltName: Full=Proteasome subunit C1; Flags:
Precursor
gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
Length = 256
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ S+L T+AG AADC +W LA++C+ YE + + +++ A+
Sbjct: 76 TAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAAS 135
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG
Sbjct: 136 KLLANMVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGTRIPGEAFAVGSG 186
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD RPD++ +EA LA AI+ A RRD +SGG V +Y + +GW++V S D
Sbjct: 187 SSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHD 246
Query: 295 VKDIYN 300
V +++
Sbjct: 247 VAGLHD 252
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+++A DSRATA I SQ + K +
Sbjct: 52 LLHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIE 91
>gi|62955555|ref|NP_001017791.1| proteasome subunit beta type 8 [Danio rerio]
gi|62531305|gb|AAH92889.1| Zgc:110346 [Danio rerio]
gi|182890838|gb|AAI65541.1| Zgc:110346 [Danio rerio]
Length = 277
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++GNAADCVYW LAKEC+ Y+ + +T +++ A+ LL NMV +YR
Sbjct: 105 KVIEINPYLLGTMSGNAADCVYWERRLAKECRIYKLRNKTRISVAAASKLLANMVAEYR- 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY + ++G + G F GSG YA ++D+ +
Sbjct: 164 -------GMGLSMGTMVCGWDQ-RGPGLYYVSSSGTRLAGDMFSTGSGCNYAYGVMDSGH 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
R DL+ EAY LA AIYHA RD +SGG V +Y + +GW +V DV D+++
Sbjct: 216 RWDLTVPEAYDLAERAIYHATHRDAYSGGVVNMYHMQKEGWIKVSQNDVGDLHH 269
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+++A DSRA+A I ++ K +
Sbjct: 69 FLHGTTTLAFKFQHGVMVAVDSRASAGSYIDTKDFKKVIE 108
>gi|397572438|gb|EJK48257.1| hypothetical protein THAOC_32963 [Thalassiosira oceanica]
Length = 248
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 108/188 (57%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G + S TV +VI ++ +L T+AG AADC +W +L +C+ YE + + +++
Sbjct: 61 GAYIASGTVK-----KVIEINPFLLGTMAGGAADCSFWERNLGIQCRMYELRNKKRISVA 115
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N +R YR GLS GT++ +DE GPQLY +D+ G + G F V
Sbjct: 116 AASKLLANTMRSYR--------GYGLSMGTMITGWDET-GPQLYYVDDDGTRLHGRYFSV 166
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LDT YRPDL+ EEA L AIYHAC RD SG LY + GW ++
Sbjct: 167 GSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIH 226
Query: 292 SRDVKDIY 299
+ D D++
Sbjct: 227 AIDTNDMH 234
>gi|291221879|ref|XP_002730946.1| PREDICTED: proteasome beta 5 subunit-like [Saccoglossus
kowalevskii]
Length = 277
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 113/196 (57%), Gaps = 17/196 (8%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GPF S TV +VI ++ +L T+AG AADC +W L+++C+ YE + + +++
Sbjct: 93 AGPFIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERVLSQQCRIYELRNKERISV 147
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV Y+ GLS GT++ +D+ GP LY +D+ G I F
Sbjct: 148 AAASKLLANMVYNYKG--------MGLSMGTMICGWDK-RGPGLYYVDSDGTRITNYMFS 198
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA +LD+ YR +LS +EAY L AIYHA RD +SGG V LY + GW +V
Sbjct: 199 VGSGSTYAYGVLDSGYRYELSVQEAYDLGQRAIYHATHRDAYSGGVVNLYHMKETGWIKV 258
Query: 291 LSRDVKDI---YNDRK 303
DVK++ Y D K
Sbjct: 259 SQNDVKELHYKYQDEK 274
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 68 FHHGTTTLAFKFQHGVIVAVDSRATAGPFIASQTVKKVIE 107
>gi|62972|emb|CAA40494.1| proteasome C1 subunit [Gallus gallus]
Length = 204
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ S+L T+AG AADC +W LA++C+ YE + + +++ A+
Sbjct: 24 TAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAAS 83
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG
Sbjct: 84 KLLANMVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGTRIPGEAFAVGSG 134
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD RPD++ +EA LA AI+ A RRD +SGG V +Y + +GW++V S D
Sbjct: 135 SSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHD 194
Query: 295 VKDIYN 300
V +++
Sbjct: 195 VAGLHD 200
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRATA I SQ + K +
Sbjct: 3 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIE 39
>gi|225703298|gb|ACO07495.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V +VI ++ +L T++G+AADCVYW LAKEC+ Y+ + + +++ A+
Sbjct: 93 SAGSYVSTQMFKKVIEINPFLLETMSGSAADCVYWERVLAKECRIYKLRNKERISVSAAS 152
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV YR GLS GT++ +D+ GP LY +D+ GL + G F GSG
Sbjct: 153 KLLANMVVNYR--------GMGLSMGTMICGWDK-KGPGLYYVDDNGLGLCGNMFSTGSG 203
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DLS EAY LA AI+HA RD +SGG V +Y + GW +V D
Sbjct: 204 NTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNMYHMRETGWIKVSQED 263
Query: 295 VKDIYN 300
V D+Y+
Sbjct: 264 VGDLYH 269
>gi|195057410|ref|XP_001995254.1| GH23050 [Drosophila grimshawi]
gi|193899460|gb|EDV98326.1| GH23050 [Drosophila grimshawi]
Length = 315
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ +++ +L TLAG AADCVYW LA+EC+ +E +Y+ + + AA ++ N
Sbjct: 97 IGSQTMRKIVELNNYMLGTLAGGAADCVYWDRVLARECRLHELRYKRRIMVDAAARMMCN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ +Y+ GL G ++A D+ G +L +D+ G+ G+ F VGSG+ YA
Sbjct: 157 ICAEYK--------GMGLVMGMMLAGCDD-EGCKLIYVDSEGMRSHGSVFSVGSGSTYAL 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT YR DL++EEAY LA AIYHA R+D +SGG VRLY IN +GW+ + + D D++
Sbjct: 208 GVLDTGYRWDLTDEEAYDLARRAIYHATRKDAYSGGIVRLYHINNKGWRNICNTDCNDLH 267
Query: 300 N 300
+
Sbjct: 268 D 268
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y G++L DSRAT+ I SQ + K +
Sbjct: 71 GTTTLGFKYQGGVVLCADSRATSGQYIGSQTMRKIVE 107
>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 14/193 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S T+ +++ ++ +L TLAG AADCVYW LAKEC+ YE + + +++
Sbjct: 96 GQFIGSQTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKECRIYELRNKERISVA 150
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ ++ N+V Y+ GLS G ++A YD+ GPQLY +D+ G G F V
Sbjct: 151 AASKIMSNIVYYYK--------GMGLSMGMMLAGYDK-RGPQLYYIDSEGTRTPGKVFSV 201
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ Y DL++EEA L AIYHA RD +SGG VR+Y I GW +
Sbjct: 202 GSGSIYAYGVLDSGYHWDLTDEEAQDLGRRAIYHATHRDAYSGGIVRVYHIKPSGWVNIS 261
Query: 292 SRDVKDIYNDRKE 304
++D D++ KE
Sbjct: 262 NQDCMDLHFQFKE 274
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFR+ G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVE 109
>gi|1405321|dbj|BAA10931.1| LMPX of hagfish [Myxine glutinosa]
Length = 273
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC+YW L+K C+ YE + + +++ A+ LL
Sbjct: 94 SYVASQTVKKVIEINPYLLGTMAGGAADCMYWERVLSKHCRIYELRNKERISVAAASKLL 153
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D G + G F VGSG+ Y
Sbjct: 154 ANMVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDEEGTRLSGGMFAVGSGSTY 204
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+++RPD++ EEAY L AI HA RD +SGG V LY + GW +V DV +
Sbjct: 205 AYGVLDSNHRPDMTPEEAYDLGRRAICHATHRDAYSGGVVNLYHMQQSGWIKVSQNDVSE 264
Query: 298 I-YNDRKE 304
+ Y R+E
Sbjct: 265 LQYKFREE 272
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA + SQ + K +
Sbjct: 67 FHHGTTTLAFKFDHGVIVAVDSRATAGSYVASQTVKKVIE 106
>gi|330799420|ref|XP_003287743.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
gi|325082252|gb|EGC35740.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
Length = 270
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 133/252 (52%), Gaps = 25/252 (9%)
Query: 72 VAETQQDHFLSPP-------LSQSSQHIISGDSCELLHP------VYTGGERCGPFSQSS 118
V + HF PP L ++ H + E H VY+GG S+S+
Sbjct: 22 VKYLDKPHFDLPPNSNPGDFLRETFAHPNAPKPLEFAHGTTTLAFVYSGGIVVAVDSKST 81
Query: 119 TVPHNTSF---QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN 175
P+ S +VI ++ ++L T+AG AADC +W L + C+ YE + + +++ A+
Sbjct: 82 QGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASK 141
Query: 176 LLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGA 235
+L N+V Y+ GLS GT++ +D+ GPQLY +DN G + G +F GSG+
Sbjct: 142 ILANIVYSYKG--------YGLSMGTMITGWDKT-GPQLYYVDNDGTRLHGQRFSCGSGS 192
Query: 236 EYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
YA +LD+ ++ ++++EEAY L A+YHA RD +SGG + +Y + GW+++ S D
Sbjct: 193 TYAYGVLDSGFKWEMNDEEAYELGRRAVYHATHRDSYSGGAINVYHVQRNGWKKISSDDC 252
Query: 296 KDIYNDRKEAPP 307
++Y P
Sbjct: 253 FELYKKYYNIAP 264
>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
Length = 268
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW LAK+C+ YE + + +++ A+ LL
Sbjct: 88 SYIASQTVKKVIEINPYLLGTMAGGAADCSYWERVLAKQCRIYELRNKERISVAAASKLL 147
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV YR GLS GT++ +D+ GP LY +D+ G + F VGSG+ +
Sbjct: 148 ANMVYYYRG--------MGLSMGTMICGWDK-RGPGLYYVDSDGSRLSNNIFSVGSGSTF 198
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ YRPDLS +EAY L AIYHA RD +SGG V +Y + GW +V DV
Sbjct: 199 AYGVLDSGYRPDLSVQEAYDLGERAIYHATHRDAYSGGVVNMYHMQETGWVKVSQNDVGQ 258
Query: 298 I---YNDRKE 304
+ Y D K
Sbjct: 259 LHYKYQDEKR 268
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 61 FAHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 100
>gi|639871|dbj|BAA08204.1| proteasome subunit RCX [Rattus rattus]
Length = 208
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 14/197 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP+ S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 26 AGPYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 80
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F
Sbjct: 81 AAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTAFS 131
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V
Sbjct: 132 VGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 191
Query: 291 LSRDVKDIYNDRKEAPP 307
S +V D+++ + P
Sbjct: 192 SSDNVADLHDKYTSSIP 208
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 4 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIE 40
>gi|357620434|gb|EHJ72628.1| proteasome subunit beta 5 [Danaus plexippus]
Length = 281
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGG+ G SQS +++ ++ +L TLAG AADCVYW LAK+C+ YE + R
Sbjct: 94 TGGQFIG--SQSMK-------KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ L+ NMV Y+ GLS G ++A D+ G QLY +D+ G
Sbjct: 145 ERISVAAASKLMANMVYNYK--------GMGLSMGMMLAGIDK-RGAQLYYVDSEGTRTP 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G F VGSG+ YA +LD+ YR DL +EEA L AIYHA RD +SGG +R+Y IN +
Sbjct: 196 GKVFSVGSGSVYAFGVLDSGYRWDLEDEEAQELGRRAIYHATHRDAYSGGIIRVYHINDK 255
Query: 286 GWQQVLSRDVKDIY 299
GW + + D +++
Sbjct: 256 GWVNISNEDCSELH 269
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRYKGGVLLAVDSRATGGQFIGSQSMKKIVE 109
>gi|187608893|sp|P28075.3|PSB5_RAT RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
Length = 263
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 14/197 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP+ S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 81 AGPYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 135
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F
Sbjct: 136 AAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTAFS 186
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V
Sbjct: 187 VGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 246
Query: 291 LSRDVKDIYNDRKEAPP 307
S +V D+++ + P
Sbjct: 247 SSDNVADLHDKYTSSIP 263
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIE 95
>gi|195429280|ref|XP_002062691.1| GK19557 [Drosophila willistoni]
gi|194158776|gb|EDW73677.1| GK19557 [Drosophila willistoni]
Length = 362
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LA+EC+ +E +++ MT+ AA + N+ +
Sbjct: 101 TMKKIVELNDYMLGTLAGGAADCVYWDRVLARECRLHELRFKRRMTVDTAARRMCNISAE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A YD GP+L +D+ G+ F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGYDND-GPKLIYVDSEGMRSHANVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYND-- 301
T Y+ D++++EAY LA AIYHA +D +SGG VRLY I +GW+ V + D +++
Sbjct: 212 TGYKWDITDQEAYDLARRAIYHATSKDAYSGGIVRLYHITEKGWKNVGNTDCWELHEQYS 271
Query: 302 RKEAPPGGGDH 312
++E GGDH
Sbjct: 272 KEEQKREGGDH 282
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + G+IL DSRAT+ I SQ + K +
Sbjct: 68 FAHGTTTLGFIFRNGVILCADSRATSGQYIGSQTMKKIVE 107
>gi|328872141|gb|EGG20508.1| proteasome subunit beta type 5 [Dictyostelium fasciculatum]
Length = 300
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 25/245 (10%)
Query: 79 HFLSPP-------LSQSSQHIISGDSCELLHP------VYTGGERCGPFSQS---STVPH 122
HF PP L Q H + E+ H V+ GG S+S S V
Sbjct: 57 HFELPPNSKPGEFLDQVWDHPNAPKPIEMAHGTTTLAFVFNGGVIVAVDSKSTQGSYVAS 116
Query: 123 NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
T +VI ++ ++L T+AG AADC +W L + C+ YE + + +++ A+ +L N+V
Sbjct: 117 RTVKKVIEITPNLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVY 176
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
Y+ GLS GT++ +D+ GP LY +DN G ++G +F VGSG+ YA +L
Sbjct: 177 SYKG--------YGLSMGTMITGWDKT-GPCLYYVDNDGTRLKGQRFSVGSGSTYAYGVL 227
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDR 302
D+ Y+PDL+++EA L A+YHA RD SGG + +Y + GW ++ S D +Y
Sbjct: 228 DSGYKPDLTDQEAQELGRRAVYHATHRDAMSGGFINVYHVKETGWVKISSDDCFKLYQKY 287
Query: 303 KEAPP 307
P
Sbjct: 288 YNVKP 292
>gi|389609369|dbj|BAM18296.1| proteasome beta5 subunit [Papilio xuthus]
Length = 283
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S T+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R +++
Sbjct: 96 GQFIGSQTMK-----KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNRERISVA 150
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L+ NMV Y+ GLS G ++A +D+ G QLY +D+ G GT F V
Sbjct: 151 AASKLMANMVYNYK--------GMGLSMGMMLAGFDK-RGAQLYYVDSEGTRTPGTVFSV 201
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ Y+ DL ++EA L AIYHA RD +SGG +R+Y I+ GW +
Sbjct: 202 GSGSVYAFGVLDSGYKWDLEDKEAQELGRRAIYHATHRDAYSGGIIRVYHISENGWVNIS 261
Query: 292 SRDVKDIY 299
+ D D++
Sbjct: 262 NEDCSDLH 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRYKGGVLLAVDSRATGGQFIGSQTMKKIVE 109
>gi|1405323|dbj|BAA10932.1| LMPX of lamprey [Petromyzon marinus]
Length = 273
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC+YW LAK+C+ YE + + +++ A+ LL
Sbjct: 94 SYIASQTVKKVIEINPYLLGTMAGGAADCMYWERVLAKQCRIYELRNKERISVAAASKLL 153
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G+ + G+ F VGSG+ Y
Sbjct: 154 ANMVYQYKG--------MGLSMGTMICGWDK-KGPGLYYVDDEGMRLPGSMFAVGSGSPY 204
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ YR DLS+EEAY L AI A RD +SGG V LY + GW +V DV +
Sbjct: 205 AFGVLDSGYREDLSKEEAYDLGRRAIASATHRDAYSGGVVNLYHMCQTGWIKVSQDDVSE 264
Query: 298 IYNDRKE 304
+ +E
Sbjct: 265 LQYKFRE 271
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 67 FQHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 106
>gi|427787733|gb|JAA59318.1| Putative 20s proteasome regulatory subunit beta type [Rhipicephalus
pulchellus]
Length = 278
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 114/194 (58%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGGE G S TV ++I ++ +L T+AG AADCVYW LA+ C+ YE + R
Sbjct: 94 TGGEYIG----SQTVK-----KIIEINKYMLGTMAGGAADCVYWERVLAERCRIYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ LL N++ Y+ GLS G ++ +D+ GP LY +DN G +
Sbjct: 145 ERISVAAASKLLANILYNYK--------GMGLSLGVMICGWDK-RGPGLYYVDNEGNRLS 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G+ + GSG+ YA ILD Y D+S+E+A+ LA AI+HA RD SGG VR+Y++
Sbjct: 196 GSLYSCGSGSTYAYGILDNGYSYDMSDEDAFELARKAIFHATFRDSASGGIVRVYRVKET 255
Query: 286 GWQQVLSRDVKDIY 299
GW+++ D KD+Y
Sbjct: 256 GWERISEEDCKDLY 269
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F+Y +G+++A DSRAT + I SQ + K +
Sbjct: 73 GTTTLAFKYKDGVVVAADSRATGGEYIGSQTVKKIIE 109
>gi|90991369|dbj|BAE93066.1| low molecular mass polypeptide [Lethenteron camtschaticum]
Length = 204
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC+YW LAK+C+ YE + + +++ A+ LL
Sbjct: 25 SYIASQTVKKVIEINPYLLGTMAGGAADCMYWERVLAKQCRIYELRNKERISVAAASKLL 84
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G+ + G+ F VGSG+ Y
Sbjct: 85 ANMVYQYK--------GMGLSMGTMICGWDK-KGPGLYYVDDEGMRLPGSMFAVGSGSPY 135
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ YR DLS+EEAY L AI A RD +SGG V LY + GW +V DV +
Sbjct: 136 AFGVLDSGYREDLSKEEAYDLGRRAIASATHRDAYSGGVVNLYHMCQTGWIKVSQDDVSE 195
Query: 298 IYNDRKE 304
+ +E
Sbjct: 196 LQYKFRE 202
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 37
>gi|195124145|ref|XP_002006554.1| GI21121 [Drosophila mojavensis]
gi|193911622|gb|EDW10489.1| GI21121 [Drosophila mojavensis]
Length = 314
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ +++ +L TLAG AADCVYW LA+EC+ +E +Y+ +++ AA ++ N+ +
Sbjct: 101 TMKKIVELNNYMLGTLAGGAADCVYWDRVLARECRLHELRYKRRISVDAAARMMCNICAE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A D+ G +L +D+ G+ G+ F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMILAGCDD-EGSKLIYVDSEGMRSHGSVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
T YR DLS EEAY LA AIYHA R+D +SGG VRLY I +GW+ V + D ++++ +
Sbjct: 212 TGYRWDLSNEEAYDLARRAIYHATRKDAYSGGIVRLYHITDKGWRNVSNTDCHELHDVFE 271
Query: 304 EAP 306
P
Sbjct: 272 NQP 274
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G++L DSRAT+ + I SQ + K +
Sbjct: 68 FDHGTTTLGFKYQGGVVLCADSRATSGEYIGSQTMKKIVE 107
>gi|449681407|ref|XP_002162379.2| PREDICTED: proteasome subunit beta type-5-like [Hydra
magnipapillata]
Length = 277
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T+AG AADC +W LAKEC+ Y+ + + +++ A+
Sbjct: 93 SAGSYIASQTVKKVIEINPYLLGTMAGGAADCAFWQRVLAKECRLYQLRNKERISVAAAS 152
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G ++G F VGSG
Sbjct: 153 KLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSDGSRLKGDLFSVGSG 203
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD D++ DL+ EEAY L AIYHA RD SGG LY + GW +V D
Sbjct: 204 STYAYGVLDADHKWDLTLEEAYDLGNRAIYHATHRDAGSGGVCNLYHMQETGWIKVSQTD 263
Query: 295 VKDI-YNDRKE 304
V D+ Y R E
Sbjct: 264 VTDLHYKYRAE 274
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRA+A I SQ + K +
Sbjct: 69 FHHGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIE 108
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W +L EC+ YE + +T+ A+ LL N
Sbjct: 100 IASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMECRLYELRNGRRITVAAASKLLAN 159
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ YR GLS GT++ +DE GPQLY +DN G ++G F VGSG+ YA
Sbjct: 160 VMSAYR--------GYGLSMGTMITGWDET-GPQLYYVDNDGTRLKGKYFSVGSGSMYAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +R DLS EEA L AIYHA RD SGG LY + GW+ + DV D++
Sbjct: 211 GVLDNHWREDLSVEEAIDLGKRAIYHATHRDAASGGINNLYHVTADGWKYIHGIDVNDMH 270
Query: 300 NDRKE 304
+ E
Sbjct: 271 YEFAE 275
>gi|307110687|gb|EFN58923.1| hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]
Length = 275
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
SQ S + T +VI ++ +L T+AG AADC +W +L ++C+ YE +T+R A+
Sbjct: 80 SQGSYISSQTVKKVIEINPHLLGTMAGGAADCQFWERNLGRQCRLYELANGKRITVRGAS 139
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N + YR GLS GT++A +DE GP LY +D+ G +G F VGSG
Sbjct: 140 KLLANTMFSYRG--------MGLSMGTMVAGWDEA-GPGLYYVDSDGQRTKGKLFSVGSG 190
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR DLS EEA L +IYHA RD SGG V Y + +GW +V D
Sbjct: 191 SLYAYGVLDEGYRWDLSVEEAVELGQRSIYHATFRDAASGGTVSAYHVTQEGWTKVRGED 250
Query: 295 VKDIYNDRKEAP 306
V ++ + AP
Sbjct: 251 VGQLHFNYYPAP 262
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + G+I+A DSRA+ I SQ + K +
Sbjct: 59 GTTTLGFIFQGGVIIAVDSRASQGSYISSQTVKKVIE 95
>gi|195380597|ref|XP_002049057.1| GJ20967 [Drosophila virilis]
gi|194143854|gb|EDW60250.1| GJ20967 [Drosophila virilis]
Length = 312
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++S +L TLAG AADCVYW LA+EC+ +E +Y+ +T+ AA ++ N+ +
Sbjct: 101 TMKKIVELNSYMLGTLAGGAADCVYWDRVLARECRLHELRYKRRITVDAAARMMCNISTQ 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A D+ G +L +D+ G+ G+ F VGSG+ YA +LD
Sbjct: 161 YK--------GMGLVMGMMLAGCDD-EGCKLIYVDSDGMRSHGSVFSVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
T YR DL+ +EA+ LA AIYHA +D +SGG VRLY IN +GW+ + + D D+++
Sbjct: 212 TGYRWDLTTDEAFDLARRAIYHATSKDAYSGGIVRLYHINDKGWKNICNTDCNDLHD 268
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y GI+L DSRAT+ + I SQ + K +
Sbjct: 71 GTTTLGFKYQGGIVLCADSRATSGEYIGSQTMKKIVE 107
>gi|20302762|gb|AAM18885.1|AF391293_2 unknown [Branchiostoma floridae]
Length = 275
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 135/271 (49%), Gaps = 39/271 (14%)
Query: 36 LNKFCQSSLGDSCELLHPVYTGGERCGQSYSQRSHCVAETQQDHFLSPPLSQSSQH--II 93
L+KF ++ D E L P TG + + DH + L+ QH I+
Sbjct: 39 LDKFSIPAVTDPAEFLKPFTTG------------EGNVKIEFDHG-TTTLAFKFQHGVIV 85
Query: 94 SGDSCELLHPVYTGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSL 153
+ DS G + S TV +VI ++ +L T+AG AADC +W L
Sbjct: 86 AVDSRA----------TAGSYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERVL 130
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A++C+ YE + + +++ A+ LL N+V Y+ GLS GT++ +D+ GP
Sbjct: 131 AEQCRIYELRNKERISVAAASKLLANIVYNYKG--------MGLSMGTMIVGWDK-RGPG 181
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G + F VGSG+ YA +LD+ Y D+ EEAY L AIYHA RD +S
Sbjct: 182 LYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEAYELGKRAIYHATHRDAYS 241
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
GG V LY + GW +V DV D++ KE
Sbjct: 242 GGVVNLYHMKETGWIKVSQTDVMDLHYKYKE 272
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 68 FDHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 107
>gi|291395993|ref|XP_002714656.1| PREDICTED: proteasome beta 8 subunit [Oryctolagus cuniculus]
Length = 276
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMFQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + GT F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGTMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMYQYQEA 274
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVVVAVDSRASAGSYIATIRVNKVIE 108
>gi|378792313|pdb|3UNB|K Chain K, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792327|pdb|3UNB|Y Chain Y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792341|pdb|3UNB|MM Chain m, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792355|pdb|3UNB|1 Chain 1, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792369|pdb|3UNE|K Chain K, Mouse Constitutive 20s Proteasome
gi|378792383|pdb|3UNE|Y Chain Y, Mouse Constitutive 20s Proteasome
gi|378792397|pdb|3UNE|MM Chain m, Mouse Constitutive 20s Proteasome
gi|378792411|pdb|3UNE|1 Chain 1, Mouse Constitutive 20s Proteasome
Length = 205
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 17/205 (8%)
Query: 99 ELLHPVYTGGER---CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+ LH V + G + S TV +VI ++ +L T+AG AADC +W LA+
Sbjct: 7 KFLHGVIVAADSRATAGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLAR 61
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+C+ YE + + +++ A+ LL NMV +Y+ GLS GT++ +D+ GP LY
Sbjct: 62 QCRIYELRNKERISVAAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLY 112
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+D+ G I GT F VGSG+ YA ++D Y DL EEAY LA AIY A RD +SGG
Sbjct: 113 YVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGG 172
Query: 276 CVRLYKINGQGWQQVLSRDVKDIYN 300
V LY + GW +V S +V D+++
Sbjct: 173 AVNLYHVREDGWIRVSSDNVADLHD 197
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 6 TTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 TTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 36
>gi|187109138|ref|NP_001119673.1| 20S proteasome beta5 subunit [Acyrthosiphon pisum]
gi|89473784|gb|ABD72704.1| putative 20S proteasome beta5 subunit [Acyrthosiphon pisum]
gi|239788834|dbj|BAH71078.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788836|dbj|BAH71079.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788838|dbj|BAH71080.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788840|dbj|BAH71081.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788844|dbj|BAH71083.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788851|dbj|BAH71084.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788853|dbj|BAH71085.1| ACYPI000065 [Acyrthosiphon pisum]
gi|239788861|dbj|BAH71089.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 276
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 108/177 (61%), Gaps = 9/177 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+K+C+ +E + + +++ A+ ++ NM+ Y+
Sbjct: 105 KIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMSNMIYYYK- 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP L+ +DN G G F VGSG+ YA +LD+ Y
Sbjct: 164 -------GYGLSIGMMLAGYDKN-GPSLFYIDNDGSRTPGKVFSVGSGSIYAFGVLDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
+ DL++EEA L AI+HA RD +SGG VR+Y I GW+ + + D +IY+ K
Sbjct: 216 KWDLTDEEAQKLGQRAIFHATHRDAYSGGIVRVYHITKDGWKHIKNEDCDEIYDRVK 272
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y GI+LA DSRAT I SQ + K +
Sbjct: 69 FHHGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVE 108
>gi|160333293|ref|NP_001099197.2| proteasome subunit beta type-5 [Rattus norvegicus]
gi|149063910|gb|EDM14180.1| proteasome (prosome, macropain) subunit, beta type 5, isoform CRA_a
[Rattus norvegicus]
Length = 263
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTAFSVGSGSVYAF 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYTSSIP 263
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|195483797|ref|XP_002090437.1| GE12802 [Drosophila yakuba]
gi|194176538|gb|EDW90149.1| GE12802 [Drosophila yakuba]
Length = 246
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+ V +L T+AG AADC YW +L +EC+ +E +Y+ + +R AA + N+ +Y+
Sbjct: 68 KVVQVIQYMLGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAARFICNVAAEYK- 126
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GL G ++A + G L +D+ GL + G F VGSGA A ILDTDY
Sbjct: 127 -------GMGLCMGMMLAGWSP-EGSSLVYVDSDGLRLHGKVFAVGSGASNALGILDTDY 178
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS+ EAY LA A+YHA RDI SGG VRLY I+ W+ V ++D ++++
Sbjct: 179 RLDLSDNEAYDLAFRAVYHATMRDIFSGGLVRLYHIDQDNWRNVANKDCQELH 231
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT+GF Y GIIL DSR T+ I SQ L K Q
Sbjct: 35 GTTTVGFVYQGGIILCVDSRTTSGKFIGSQSLQKVVQ 71
>gi|431907188|gb|ELK11254.1| Proteasome subunit beta type-5 [Pteropus alecto]
Length = 263
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ E+ P
Sbjct: 256 DKYSESTP 263
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 ILHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|346471555|gb|AEO35622.1| hypothetical protein [Amblyomma maculatum]
Length = 278
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGGE G S TV ++I ++ +L T+AG AADCVYW LA+ C+ YE + R
Sbjct: 94 TGGEYIG----SQTVK-----KIIVINKYLLGTMAGGAADCVYWQRVLAERCRIYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ LL N++ Y+ GLS G ++ +D+ GP LY +DN G +
Sbjct: 145 ERISVAAASKLLANILYNYK--------GMGLSLGVMICGWDK-RGPGLYYVDNEGNRLS 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G + GSG+ YA +LD Y DLS+EEA+ L AI+HA RD SGG VR+Y++
Sbjct: 196 GNLYSCGSGSTYAYGVLDNGYSYDLSDEEAFELGRKAIFHATFRDSASGGIVRVYRVKET 255
Query: 286 GWQQVLSRDVKDIY 299
GW+ + D KD+Y
Sbjct: 256 GWECISEEDCKDLY 269
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
GTTTL F+Y G+I+A DSRAT + I SQ + K
Sbjct: 73 GTTTLAFKYRGGVIVAADSRATGGEYIGSQTVKKI 107
>gi|6755204|ref|NP_035316.1| proteasome subunit beta type-5 [Mus musculus]
gi|187608891|sp|O55234.3|PSB5_MOUSE RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
gi|5757659|gb|AAD50536.1|AF060091_1 proteasome subunit X [Mus musculus]
gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
gi|2897809|dbj|BAA24917.1| PSMB5 [Mus musculus]
gi|74228773|dbj|BAE21876.1| unnamed protein product [Mus musculus]
gi|77415527|gb|AAI06145.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
gi|148704392|gb|EDL36339.1| mCG8712, isoform CRA_b [Mus musculus]
Length = 264
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 17/207 (8%)
Query: 97 SCELLHPVYTGGER---CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSL 153
+ + LH V + G + S TV +VI ++ +L T+AG AADC +W L
Sbjct: 64 AFKFLHGVIVAADSRATAGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A++C+ YE + + +++ A+ LL NMV +Y+ GLS GT++ +D+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPG 169
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G I GT F VGSG+ YA ++D Y DL EEAY LA AIY A RD +S
Sbjct: 170 LYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYS 229
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIYN 300
GG V LY + GW +V S +V D+++
Sbjct: 230 GGAVNLYHVREDGWIRVSSDNVADLHD 256
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
Length = 276
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T+AG AADC +W LA+ C+ YE + + +++ A+
Sbjct: 94 SMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSFWERVLAERCRVYELRNKERISVAAAS 153
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG
Sbjct: 154 KLLANMVYYYK--------GMGLSMGTMICGWDK-RGPGLYYVDSDGTRMTNYMFSVGSG 204
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD+ ++ DL +EEAY LA AI+HA RD +SGG V LY + GW ++ D
Sbjct: 205 STYAYGILDSGFKHDLEDEEAYDLARRAIFHATHRDAYSGGSVNLYHVKETGWVKISRDD 264
Query: 295 VKDIYNDRKEA 305
V +Y K+A
Sbjct: 265 VGPLYYQYKDA 275
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRA+ I SQ + K +
Sbjct: 70 FLHGTTTLAFKFKNGVIVAADSRASMGSYIGSQTVKKVIE 109
>gi|1405325|dbj|BAA10933.1| LMP7 of nurse shark [Ginglymostoma cirratum]
Length = 274
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADCV+W LAK+C+ Y+ + + +++ A+ LL NMV +Y+
Sbjct: 103 KVIEINPYLLGTMSGSAADCVFWERMLAKQCRIYKLRNKKRISVSAASKLLANMVSEYKG 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +DE GP LY +++ G+ + G+ F GSG YA ++D+ Y
Sbjct: 163 --------MGLSMGTMICGWDE-KGPGLYYVNDGGMRLSGSMFSTGSGCSYAYGVMDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
R DL+ +EAY LA AIYHA RD +SGG V +Y + GW +V DV
Sbjct: 214 RYDLTVKEAYDLAQRAIYHATHRDAYSGGTVNMYHMRENGWIKVSQEDV 262
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRA+A I +Q K +
Sbjct: 70 GTTTLAFKFQHGVMVAVDSRASAGSYISTQMFKKVIE 106
>gi|198438343|ref|XP_002132107.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 5 [Ciona intestinalis]
Length = 270
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 13/188 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LAK+C+ YE + + +++ A+ +L N
Sbjct: 92 IASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAKQCRVYELRNKERISVAAASKVLAN 151
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV Y+ GLS GT++ +D+ GP LY +D+ G + G+ F VGSGA YA
Sbjct: 152 MVYNYK--------GMGLSMGTMICGWDK-RGPGLYYVDSDGQRLNGSMFAVGSGATYAY 202
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y D+ E+A AL AIYHA RD +SGG V LY + GW+ + DVKD++
Sbjct: 203 GVMDAGYSNDMCVEDALALGKRAIYHATHRDAYSGGFVNLYHMKESGWEHISWTDVKDLH 262
Query: 300 ----NDRK 303
N++K
Sbjct: 263 YAYKNEKK 270
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+++ATDSRATA D I SQ + K +
Sbjct: 63 FNHGTTTLAFKFQHGVVVATDSRATAGDYIASQTVKKVIE 102
>gi|1708781|emb|CAA66313.1| LMP7-like protein [Botryllus schlosseri]
Length = 257
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC++W LAK+C+ YE + + +++ A+ +L
Sbjct: 80 SYIASQTVKKVIEINPYLLGTMAGGAADCMFWERVLAKQCRIYELRNKERISVAAASKIL 139
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ Y
Sbjct: 140 ANMVYNYK--------GMGLSMGTMICGWDK-HGPGLFYVDSDGQRLKGNMFSVGSGSTY 190
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D+ YR DLS EA L +IYHA RD +SGG V LY + GW+ + DV D
Sbjct: 191 AYGVMDSGYRYDLSVAEALDLGKRSIYHATHRDAYSGGVVNLYHMKETGWEFISQTDVLD 250
Query: 298 IYNDRKE 304
I+ +K+
Sbjct: 251 IHYKQKK 257
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+++A DSRATA I SQ + K +
Sbjct: 53 FNHGTTTLAFKFQHGVVVAVDSRATAGSYIASQTVKKVIE 92
>gi|198456605|ref|XP_001360388.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
gi|198135674|gb|EAL24963.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
Length = 321
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LA++ + +E +++ +++ AA ++VN+ +
Sbjct: 101 TMKKIVELNDYMLGTLAGGAADCVYWDRVLARDSRLHELRFKRRLSVDAAARMIVNISAE 160
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GL G ++A YD+ GP+L +D+ G+ G F VGSG+ YA +LD
Sbjct: 161 YKG--------MGLVMGMMLAGYDD-EGPKLIYVDSEGMRCHGNVFAVGSGSPYALGVLD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
T +R ++++EA+ LA AIYHA +D +SGG VRLY IN +GW+ V + D ++YN
Sbjct: 212 TGHRFTMTDQEAFDLARRAIYHATSKDAYSGGIVRLYHINEKGWRNVSNTDCSELYN 268
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++L DSRAT+ I SQ + K +
Sbjct: 68 FAHGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVE 107
>gi|432094632|gb|ELK26138.1| Proteasome subunit beta type-8 [Myotis davidii]
Length = 289
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 118 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 177
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G+ F GSG YA ++D+ Y
Sbjct: 178 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGSMFSTGSGNSYAYGVMDSGY 228
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 229 RPDLSLEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 287
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 85 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 121
>gi|335292522|ref|XP_001924480.2| PREDICTED: proteasome subunit beta type-5 [Sus scrofa]
Length = 275
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 17/214 (7%)
Query: 97 SCELLHPVYTGGER---CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSL 153
+ + LH V + G + S TV +VI ++ +L T+AG AADC +W L
Sbjct: 76 AFKFLHGVIVAADSRATAGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLL 130
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A++C+ YE + + +++ A+ LL NMV +Y+ GLS GT++ +D+ GP
Sbjct: 131 ARQCRIYELRNKERISVAAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPG 181
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G I G F VGSG+ YA ++D Y DL E+AY LA AIY A RD +S
Sbjct: 182 LYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYS 241
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
GG V LY + GW +V S +V D+++ E+ P
Sbjct: 242 GGSVNLYHVREDGWIRVSSDNVADLHDKYSESTP 275
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 68 MLHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 107
>gi|443685119|gb|ELT88834.1| hypothetical protein CAPTEDRAFT_150903 [Capitella teleta]
Length = 275
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 10/188 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW +A++C+ YE + + +++ A+ LL N
Sbjct: 97 IASQTVKKVIEINPYLLGTMAGGAADCQYWERVVARQCRIYELRNKERISVAAASKLLAN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG+ YA
Sbjct: 157 IVYNYK--------GMGLSMGTMICGWDK-KGPGLYYVDSDGTRMTNAMFSVGSGSTYAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI- 298
+LD+ YR DLS EEAYAL AIYHA RD +GG V +Y + GW +V D+ ++
Sbjct: 208 GVLDSSYRWDLSVEEAYALGERAIYHAAHRDAFTGGVVNMYHMKESGWVKVSQNDIGELH 267
Query: 299 YNDRKEAP 306
Y + EA
Sbjct: 268 YKFKAEAK 275
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA D I SQ + K +
Sbjct: 71 GTTTLAFKFKHGVIVAVDSRATAGDWIASQTVKKVIE 107
>gi|270011211|gb|EFA07659.1| hypothetical protein TcasGA2_TC030625 [Tribolium castaneum]
Length = 273
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 20/195 (10%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S T+ +++ ++ +L TLAG AADCVYW LAK+C+ YE + R +++
Sbjct: 89 GQFIGSQTMK-----KIVEINDFLLGTLAGGAADCVYWDRVLAKQCRMYELRNRERISVA 143
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L+ NMV Y+ GLS G ++A +D+ +LY +D+ G G F V
Sbjct: 144 AASKLMANMVYNYK--------GMGLSMGMMLAGWDK----RLYYVDSEGTRTPGKVFSV 191
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ Y+ DL++EEAY L +IYHA RD +SGG VR+Y + GW +
Sbjct: 192 GSGSIYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKPTGWVHID 251
Query: 292 SRDVKDI---YNDRK 303
+ D D+ Y D K
Sbjct: 252 NNDCMDLHYKYQDEK 266
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y G++LA DSRAT I SQ + K +
Sbjct: 63 FDHGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVE 102
>gi|327289325|ref|XP_003229375.1| PREDICTED: proteasome subunit beta type-5-like [Anolis
carolinensis]
Length = 316
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 134 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 193
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F VGSG+ YA
Sbjct: 194 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTVFSVGSGSVYAY 244
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y +LS EEAY LA AIY A RD +SGG V LY + GW +V S DV ++
Sbjct: 245 GVMDRGYSHNLSVEEAYDLARRAIYQATYRDAYSGGTVNLYHVRQDGWIRVSSDDVSKLH 304
Query: 300 NDRKEAPPG 308
++ G
Sbjct: 305 ELFRDKASG 313
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 105 LLHGTTTLAFKFQHGVIVAVDSRATAGVYIASQTVKKVIE 144
>gi|426232754|ref|XP_004010385.1| PREDICTED: proteasome subunit beta type-5 [Ovis aries]
Length = 263
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 9/186 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEA 305
+ E+
Sbjct: 256 DKYSES 261
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|395503044|ref|XP_003755883.1| PREDICTED: proteasome subunit beta type-5 [Sarcophilus harrisii]
Length = 263
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGVTFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL+ EEAY LA AIY A RD +SGG V LY + GW +V S +V D+
Sbjct: 196 GVMDRGYSFDLTVEEAYDLARRAIYQATYRDAYSGGVVNLYHVREDGWIRVSSDNVADL- 254
Query: 300 NDRKE 304
ND+ +
Sbjct: 255 NDKYQ 259
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 LLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIE 95
>gi|15126628|gb|AAH12246.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
Length = 264
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 17/207 (8%)
Query: 97 SCELLHPVYTGGER---CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSL 153
+ + LH V + G + S TV +VI ++ +L T+AG AADC +W L
Sbjct: 64 AFKFLHGVIVAADSRATAGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A++C+ YE + + +++ A+ LL NMV +Y+ GLS GT++ +D+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPG 169
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G I GT F VGSG+ YA ++D Y DL EEAY LA AIY A RD +S
Sbjct: 170 LYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYS 229
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIYN 300
GG V LY + GW +V + +V D+++
Sbjct: 230 GGAVNLYHVREDGWIRVSNDNVADLHD 256
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|18539490|gb|AAL74417.1| proteosome PSMB5/8 protein [Branchiostoma lanceolatum]
Length = 194
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 9/181 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 23 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAEQCRIYELRNKERISVAAASKLL 82
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG+ Y
Sbjct: 83 ANIVYNYK--------GMGLSMGTMIVGWDK-RGPGLYYVDSDGTRLSNNMFSVGSGSTY 133
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ Y+ D+S EEAY L +IYHA RD +SGG V LY + GW +V DV D
Sbjct: 134 AYGVLDSGYKWDMSVEEAYELGKRSIYHATHRDAYSGGVVNLYHMKETGWIKVSQTDVMD 193
Query: 298 I 298
+
Sbjct: 194 L 194
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 7 TTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 TTLAFKWQHGVIVAVDSRATAGSYIASQTVKKVIE 35
>gi|195396847|ref|XP_002057040.1| GJ16567 [Drosophila virilis]
gi|194146807|gb|EDW62526.1| GJ16567 [Drosophila virilis]
Length = 328
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 105/187 (56%), Gaps = 13/187 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I V IL T+AG AADCVYW L EC+ +E Y MT++ AA ++ N+ K++
Sbjct: 104 KIIEVDKGILGTIAGGAADCVYWDRVLTMECRLFELTYGRSMTVKSAARIMCNIAYKFK- 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GL G ++A YD GPQL +D+ G +EG F +GSGA A ILD+ Y
Sbjct: 163 -------GLGLCIGMMLAGYD-FDGPQLIYVDSDGQRVEGNLFTIGSGAHCALGILDSFY 214
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI----YNDR 302
R D+S+EEAY LA +YHA D ++GG VRLY + W V +D ++ +
Sbjct: 215 RWDMSDEEAYNLALRGVYHATYLDAYTGGLVRLYHMRPHKWSIVTVKDCMELGEIFAKAQ 274
Query: 303 KEAPPGG 309
KE P GG
Sbjct: 275 KENPTGG 281
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLG 45
GTTTLGF+Y GI+L DSR T + I SQ++ K + G
Sbjct: 71 GTTTLGFKYQGGILLCADSRGTNGEFIASQEMKKIIEVDKG 111
>gi|344298836|ref|XP_003421097.1| PREDICTED: proteasome subunit beta type-8-like [Loxodonta africana]
Length = 276
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D++G + G+ F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDSGTRLSGSMFSTGSGNPYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+P+LS EEAY LA AI HA RD +SGG V +Y + GW +V S DV D+ + +E
Sbjct: 216 QPNLSPEEAYDLARRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYRE 273
>gi|390468855|ref|XP_002753673.2| PREDICTED: proteasome subunit beta type-5 [Callithrix jacchus]
Length = 263
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSAP 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|348577545|ref|XP_003474544.1| PREDICTED: proteasome subunit beta type-5-like [Cavia porcellus]
Length = 263
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGAAFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSVP 263
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|301781284|ref|XP_002926051.1| PREDICTED: proteasome subunit beta type-5-like [Ailuropoda
melanoleuca]
gi|281343378|gb|EFB18962.1| hypothetical protein PANDA_015661 [Ailuropoda melanoleuca]
Length = 263
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
++ + P
Sbjct: 256 DEYSGSAP 263
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|334323745|ref|XP_001377227.2| PREDICTED: proteasome subunit beta type-8-like [Monodelphis
domestica]
Length = 268
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 97 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYRLRNGERISVSAASKLLSNMMCQYRG 156
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + GT F GSG YA ++D+ Y
Sbjct: 157 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGTMFSTGSGNSYAYGVMDSGY 207
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV ++++ E
Sbjct: 208 RPDLSPEEAYDLGRRAIVHATHRDSYSGGFVNMYHMKEDGWVKVESSDVSNLFHKYLE 265
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + +NK +
Sbjct: 64 GTTTLAFKFQHGVIVAVDSRASAGSYIATLHVNKVIE 100
>gi|351697092|gb|EHB00011.1| Proteasome subunit beta type-5 [Heterocephalus glaber]
Length = 263
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGVAFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSVP 263
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|1708783|emb|CAA66312.1| LMP7-like protein [Geodia cydonium]
Length = 280
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 12/192 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW LA C+ YE + + +++ A+ +L
Sbjct: 98 SWIASQTVKKVIEINPYLLGTMAGGAADCAYWERQLAFSCRVYELRNKERISVAAASKIL 157
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG+ Y
Sbjct: 158 SNMVYRYKG--------MGLSMGTMICGWDK-KGPGLYYVDSDGSRLTHHMFSVGSGSTY 208
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ Y DLS EEA L AIYHA RD +SGG V LY + GW +V DVK+
Sbjct: 209 AYGVLDSGYSYDLSVEEARDLGKRAIYHATHRDAYSGGVVNLYHMMETGWVKVSQTDVKE 268
Query: 298 I---YNDRKEAP 306
+ Y D K+ P
Sbjct: 269 LHYQYQDEKKLP 280
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 71 FAHGTTTLAFKFQHGVIVAVDSRATAGSWIASQTVKKVIE 110
>gi|126278093|ref|XP_001379940.1| PREDICTED: proteasome subunit beta type-5-like [Monodelphis
domestica]
Length = 263
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 10/183 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGVTFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DLS E+AY LA AIY A RD +SGG V LY + GW +V S +V D+
Sbjct: 196 GVMDRGYSFDLSVEDAYDLARRAIYQATYRDAYSGGVVNLYHVREDGWIRVSSDNVADL- 254
Query: 300 NDR 302
ND+
Sbjct: 255 NDK 257
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 LLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIE 95
>gi|12845889|dbj|BAB26942.1| unnamed protein product [Mus musculus]
Length = 264
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 17/207 (8%)
Query: 97 SCELLHPVYTGGER---CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSL 153
+ + LH V + G + S TV +VI ++ +L T+AG AA+C +W L
Sbjct: 64 AFKFLHGVIVAADSRATAGAYIASQTVK-----KVIEINPYLLGTMAGGAANCSFWERLL 118
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A++C+ YE + + +++ A+ LL NMV +Y+ GLS GT++ +D+ GP
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPG 169
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G I GT F VGSG+ YA ++D Y DL EEAY LA AIY A RD +S
Sbjct: 170 LYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYS 229
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIYN 300
GG V LY + GW +V S +V D+++
Sbjct: 230 GGAVNLYHVREDGWIRVSSDNVADLHD 256
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|403264182|ref|XP_003924370.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403264184|ref|XP_003924371.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403264186|ref|XP_003924372.1| PREDICTED: proteasome subunit beta type-5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 263
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|354488029|ref|XP_003506173.1| PREDICTED: proteasome subunit beta type-5-like [Cricetulus griseus]
gi|344242609|gb|EGV98712.1| Proteasome subunit beta type-5 [Cricetulus griseus]
Length = 263
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTAFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL +EAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVQEAYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 N 300
+
Sbjct: 256 D 256
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|108860908|sp|Q3T112.2|PSB8_BOVIN RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|63169161|gb|AAY34697.1| proteasome subunit beta type 8 [Bos taurus]
gi|296474549|tpg|DAA16664.1| TPA: proteasome subunit beta type-8 precursor [Bos taurus]
Length = 276
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC+YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG +A ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 274
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + K+NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIE 108
>gi|344298706|ref|XP_003421032.1| PREDICTED: proteasome subunit beta type-5-like [Loxodonta africana]
Length = 263
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGVVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 DKYSSPAP 263
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIE 95
>gi|410958874|ref|XP_003986038.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Felis catus]
Length = 276
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NMV +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +++ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNSDGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI +A RD +SGG V +Y + GW ++ S DV D+ + +EA
Sbjct: 216 RPDLSPEEAYELGRRAIVYATHRDSYSGGVVNMYHMKEDGWVKLESTDVSDLLHRYREA 274
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRA+A I + + NK +
Sbjct: 72 GTTTLAFKFQHGVVVAVDSRASAGTYIATLRCNKVIE 108
>gi|417398038|gb|JAA46052.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 263
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 14/190 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
G + S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 81 AGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 135
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F
Sbjct: 136 AAASKLLANMVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGAAFS 186
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V
Sbjct: 187 VGSGSVYAYGVMDRGYYYDLEVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 246
Query: 291 LSRDVKDIYN 300
S +V D+++
Sbjct: 247 SSDNVADLHD 256
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 ILHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|291403557|ref|XP_002718121.1| PREDICTED: proteasome beta 5 subunit [Oryctolagus cuniculus]
Length = 263
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|83035093|ref|NP_001032701.1| proteasome subunit beta type-5 precursor [Bos taurus]
gi|122138604|sp|Q32KL2.1|PSB5_BOVIN RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|81673887|gb|AAI10040.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Bos taurus]
gi|296483649|tpg|DAA25764.1| TPA: proteasome subunit beta type-5 precursor [Bos taurus]
Length = 263
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLH 255
Query: 300 N 300
+
Sbjct: 256 D 256
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 ILHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|18124200|gb|AAL59861.1|AF363582_1 proteasome beta-subunit LMP7-like protein [Heterodontus francisci]
Length = 285
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 103/169 (60%), Gaps = 9/169 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADCVYW LAK C+ Y+ + + +++ A+ LL NMV +Y+
Sbjct: 103 KVIEINPYLLGTMSGSAADCVYWERMLAKHCRIYKLRNKKRISVSAASKLLANMVSEYKG 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY + GL + G F GSG+ YA ++D+ Y
Sbjct: 163 --------MGLSMGTMICGWDD-KGPGLYYVSGNGLRLAGNMFSTGSGSIYAYGVMDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
+ DLS ++AY LA AIYHA RD +SGG V +Y + GW +V DV
Sbjct: 214 KYDLSVQDAYNLAQRAIYHATHRDAYSGGTVNMYHMRDNGWIKVSQEDV 262
>gi|440906310|gb|ELR56586.1| Proteasome subunit beta type-5, partial [Bos grunniens mutus]
Length = 266
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 88 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 147
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 148 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 198
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL EEAY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 199 GVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLH 258
Query: 300 N 300
+
Sbjct: 259 D 259
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 59 ILHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 98
>gi|359320183|ref|XP_003639276.1| PREDICTED: proteasome subunit beta type-5-like [Canis lupus
familiaris]
Length = 263
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSTP 263
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|410958876|ref|XP_003986039.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Felis catus]
Length = 270
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NMV +YR
Sbjct: 99 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRG 158
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +++ G + G F GSG YA ++D+ Y
Sbjct: 159 --------MGLSMGSMICGWDKK-GPGLYYVNSDGTRLSGNMFSTGSGNTYAYGVMDSGY 209
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI +A RD +SGG V +Y + GW ++ S DV D+ + +EA
Sbjct: 210 RPDLSPEEAYELGRRAIVYATHRDSYSGGVVNMYHMKEDGWVKLESTDVSDLLHRYREA 268
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRA+A I + + NK +
Sbjct: 66 GTTTLAFKFQHGVVVAVDSRASAGTYIATLRCNKVIE 102
>gi|355714024|gb|AES04864.1| proteasome subunit, beta type, 5 [Mustela putorius furo]
Length = 247
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 69 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 128
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 129 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 179
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S V D++
Sbjct: 180 GVMDRGYSYDLEAEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDSVADLH 239
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 240 DKYSGSTP 247
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 40 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 79
>gi|299116096|emb|CBN74512.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ YE + + +++
Sbjct: 91 GPYIASGTVK-----KVIEINPYLLGTMAGGAADCSFWERNLGIQCRMYELRNKERISVA 145
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + +YR GLS GT++A +D+ GPQLY D+ G + G F V
Sbjct: 146 AASKLLSNTMSQYRG--------YGLSMGTMVAGWDKT-GPQLYYCDDDGTRLHGNLFSV 196
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LDT Y+ D+++EEA L AIYHA RD +SG +Y + GW +V
Sbjct: 197 GSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVH 256
Query: 292 SRDVKDIY 299
+ DV D++
Sbjct: 257 AGDVNDMH 264
>gi|410961898|ref|XP_003987515.1| PREDICTED: proteasome subunit beta type-5 [Felis catus]
Length = 263
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSTP 263
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|21465653|pdb|1IRU|L Chain L, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465667|pdb|1IRU|Z Chain Z, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 204
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 14/197 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
G + S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 22 AGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 76
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F
Sbjct: 77 AAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFS 127
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V
Sbjct: 128 VGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 187
Query: 291 LSRDVKDIYNDRKEAPP 307
S +V D++ + P
Sbjct: 188 SSDNVADLHEKYSGSTP 204
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 6 TTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 36
>gi|417398242|gb|JAA46154.1| Putative 20s proteasome regulatory subunit beta type [Desmodus
rotundus]
Length = 276
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G+ F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNENGTRLSGSMFSTGSGNSYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPDLSLEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHRYREA 274
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|194207138|ref|XP_001494538.2| PREDICTED: proteasome subunit beta type-5-like isoform 1 [Equus
caballus]
Length = 263
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo sapiens]
gi|30582393|gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
Length = 208
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 14/197 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
G + S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 26 AGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 80
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F
Sbjct: 81 AAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFS 131
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V
Sbjct: 132 VGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 191
Query: 291 LSRDVKDIYNDRKEAPP 307
S +V D++ + P
Sbjct: 192 SSDNVADLHEKYSGSTP 208
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 40
>gi|30584671|gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5
[synthetic construct]
Length = 209
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 14/197 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
G + S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 26 AGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 80
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G I G F
Sbjct: 81 AAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFS 131
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA ++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V
Sbjct: 132 VGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRV 191
Query: 291 LSRDVKDIYNDRKEAPP 307
S +V D++ + P
Sbjct: 192 SSDNVADLHEKYSGSTP 208
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 1 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 40
>gi|403268779|ref|XP_003926444.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 276
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|426376387|ref|XP_004054982.1| PREDICTED: proteasome subunit beta type-5 isoform 3 [Gorilla
gorilla gorilla]
Length = 268
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 90 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 149
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 150 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 200
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 201 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 260
Query: 300 NDRKEAPP 307
+ P
Sbjct: 261 EKYSGSAP 268
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 61 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 100
>gi|426376383|ref|XP_004054980.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Gorilla
gorilla gorilla]
gi|426376385|ref|XP_004054981.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Gorilla
gorilla gorilla]
gi|426376389|ref|XP_004054983.1| PREDICTED: proteasome subunit beta type-5 isoform 4 [Gorilla
gorilla gorilla]
gi|426376391|ref|XP_004054984.1| PREDICTED: proteasome subunit beta type-5 isoform 5 [Gorilla
gorilla gorilla]
Length = 263
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSAP 263
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|431916890|gb|ELK16650.1| Proteasome subunit beta type-8 [Pteropus alecto]
Length = 274
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 103 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA ++D+ Y
Sbjct: 163 --------MGLSIGSMICGWDKK-GPGLYYVNENGTRLSGNMFSTGSGNTYAYGVMDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 214 RPNLSLEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 272
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 70 GTTTLAFKFQHGVIVAVDSRASAGSYIDTLRVNKVIE 106
>gi|210148640|gb|ACJ09226.1| proteasome subunit beta 5 [Helicoverpa armigera]
Length = 280
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 113/194 (58%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGG+ G SQS +++ ++ +L TLAG AADCVYW LAK+C+ YE + R
Sbjct: 94 TGGQFIG--SQSMK-------KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ L+ NMV Y+ GLS G ++A D+ G QLY +D+ G
Sbjct: 145 ERISVAAASKLMANMVYNYK--------GMGLSMGMMLAGVDK-RGAQLYYVDSEGTRTP 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G F VGSG+ YA +LD+ Y DLS+++A L AIYHA RD +SGG +R+Y I+ +
Sbjct: 196 GKVFSVGSGSVYAFGVLDSGYSWDLSDKDAQELGRRAIYHATHRDAYSGGIIRVYHISEK 255
Query: 286 GWQQVLSRDVKDIY 299
GW + + D +++
Sbjct: 256 GWVNISNEDCSELH 269
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRYKGGVLLAVDSRATGGQFIGSQSMKKIVE 109
>gi|156363343|ref|XP_001626004.1| predicted protein [Nematostella vectensis]
gi|156212864|gb|EDO33904.1| predicted protein [Nematostella vectensis]
Length = 279
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LAK+C+ YE + + +++ A+ +L
Sbjct: 98 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAKQCRIYELRNKERISVAAASKIL 157
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG+ Y
Sbjct: 158 ANMVYYYKG--------MGLSMGTMICGWDK-KGPGLYYVDSDGTRLSNQMFSVGSGSTY 208
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D+ Y+ D+S EEAY L +IYHA RD +SGG V LY + GW +V DV
Sbjct: 209 AYGVMDSGYKYDMSPEEAYDLGVRSIYHATHRDAYSGGVVNLYHMKETGWIKVSQTDVAK 268
Query: 298 IYNDRKE 304
++ +E
Sbjct: 269 LHYQYQE 275
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 71 FDHGTTTLAFKFKHGVIVAVDSRATAGSYIASQTVKKVIE 110
>gi|386780738|ref|NP_001247774.1| proteasome subunit beta type-5 [Macaca mulatta]
gi|402875682|ref|XP_003901626.1| PREDICTED: proteasome subunit beta type-5 [Papio anubis]
gi|355693139|gb|EHH27742.1| hypothetical protein EGK_18013 [Macaca mulatta]
gi|355778436|gb|EHH63472.1| hypothetical protein EGM_16445 [Macaca fascicularis]
gi|380814832|gb|AFE79290.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
gi|383420111|gb|AFH33269.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
gi|384948344|gb|AFI37777.1| proteasome subunit beta type-5 isoform 1 [Macaca mulatta]
Length = 263
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|157876794|ref|XP_001686739.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
gi|68129814|emb|CAJ09120.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
Length = 302
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG S++ST + T +V+ ++ +L TLAG AADC YW L EC+ +E
Sbjct: 107 FNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVLGMECRLWE 166
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +T+ A+ +L N+ YR NH GLS GT++A +DE GP LY +D+ G
Sbjct: 167 LRNGSRITVAAASKILANITYAYR--NH------GLSMGTMLAGWDE-FGPSLYYVDDKG 217
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
++ F VGSG+ YA +LDT YR DLS E+A LA +I+HA RD SGG V +Y
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 282 INGQGWQQVLSRDVKDIYN 300
++ +GW ++ D +Y+
Sbjct: 278 VHEKGWTKISRDDQTKLYD 296
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRA+ I SQ + K +
Sbjct: 99 GTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLE 135
>gi|444728807|gb|ELW69249.1| Proteasome subunit beta type-5 [Tupaia chinensis]
Length = 263
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 DKYSRYTP 263
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|4506201|ref|NP_002788.1| proteasome subunit beta type-5 isoform 1 [Homo sapiens]
gi|197099702|ref|NP_001126063.1| proteasome subunit beta type-5 precursor [Pongo abelii]
gi|397473327|ref|XP_003808166.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Pan paniscus]
gi|397473329|ref|XP_003808167.1| PREDICTED: proteasome subunit beta type-5 isoform 2 [Pan paniscus]
gi|187608890|sp|P28074.3|PSB5_HUMAN RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit MB1; AltName: Full=Proteasome subunit X; Flags:
Precursor
gi|187608892|sp|Q5R8S2.3|PSB5_PONAB RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|1262338|emb|CAA64838.1| proteasome [Homo sapiens]
gi|35505516|gb|AAH57840.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|55730230|emb|CAH91838.1| hypothetical protein [Pongo abelii]
gi|78395069|gb|AAI07721.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|119586597|gb|EAW66193.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|119586599|gb|EAW66195.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|189053214|dbj|BAG34836.1| unnamed protein product [Homo sapiens]
gi|261861254|dbj|BAI47149.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
gi|312153006|gb|ADQ33015.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
gi|410262442|gb|JAA19187.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
gi|410295900|gb|JAA26550.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
gi|410352251|gb|JAA42729.1| proteasome (prosome, macropain) subunit, beta type, 5 [Pan
troglodytes]
Length = 263
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|332223022|ref|XP_003260670.1| PREDICTED: proteasome subunit beta type-5 isoform 1 [Nomascus
leucogenys]
gi|441667150|ref|XP_004091952.1| PREDICTED: proteasome subunit beta type-5 [Nomascus leucogenys]
Length = 263
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSTP 263
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|194880359|ref|XP_001974418.1| GG21097 [Drosophila erecta]
gi|190657605|gb|EDV54818.1| GG21097 [Drosophila erecta]
Length = 245
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+ V+ +L T+AG AADC YW +L +EC+ +E +++ + +R AA + N+ +Y+
Sbjct: 68 KVVQVNKYMLGTMAGGAADCTYWDRALTRECRLHELRFKERLPVRSAARFICNVAAEYKG 127
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GL G ++A + G L +D+ GL + G F VGSG+ A ILDTDY
Sbjct: 128 --------MGLCMGMMLAGWSP-EGFSLVYVDSDGLRLHGKVFAVGSGSHNALGILDTDY 178
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS++EAY LA A+YHA RDI SGG VRLY ++ W+ V ++D +++
Sbjct: 179 RLDLSDDEAYDLAFRAVYHATMRDIFSGGLVRLYHMDQDNWRNVANKDCHELH 231
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT+GF Y GIIL DSRAT+ I SQ + K Q
Sbjct: 35 GTTTVGFVYQGGIILCVDSRATSGKFIGSQNVQKVVQ 71
>gi|31874085|emb|CAD97956.1| hypothetical protein [Homo sapiens]
Length = 266
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 88 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 147
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 148 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 198
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 199 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 258
Query: 300 NDRKEAPP 307
+ P
Sbjct: 259 EKYSGSTP 266
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 59 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 98
>gi|355766753|gb|EHH62548.1| hypothetical protein EGM_20930 [Macaca fascicularis]
Length = 276
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDTLRVNKVIE 108
>gi|196259781|ref|NP_001124502.1| proteasome subunit beta type-8 [Ovis aries]
gi|193245504|gb|ACF16970.1| HA2B [Ovis aries]
Length = 276
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG +A ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPDLSIEEAYDLGRRAIVHATHRDSYSGGFVNMYHMKEDGWVKVESTDVSDLMHQYREA 274
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + K+NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIE 108
>gi|444519089|gb|ELV12572.1| Proteasome subunit beta type-8 [Tupaia chinensis]
Length = 274
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 103 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 163 --------MGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGNCYAYGVMDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 214 RPDLSVEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESSDVSDLLHRYREA 272
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + ++NK +
Sbjct: 70 GTTTLAFKFQHGVIVAVDSRASAGNYIATLRVNKVIE 106
>gi|297290551|ref|XP_001115562.2| PREDICTED: proteasome subunit beta type-8-like [Macaca mulatta]
Length = 276
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIGALRVNKVIE 108
>gi|402866606|ref|XP_003897470.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Papio anubis]
Length = 276
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAHATHRDSYSGGIVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|355561577|gb|EHH18209.1| hypothetical protein EGK_14764 [Macaca mulatta]
Length = 276
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|383420117|gb|AFH33272.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDTLRVNKVIE 108
>gi|397474369|ref|XP_003808654.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan paniscus]
Length = 272
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 270
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRMNKVIE 104
>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i; Flags: Precursor
gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
norvegicus]
gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
[Rattus norvegicus]
Length = 276
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY LA AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKVESTDVSDLLHKYREA 274
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIE 108
>gi|94966773|ref|NP_001035570.1| proteasome subunit beta type-8 [Bos taurus]
gi|74267608|gb|AAI02171.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Bos taurus]
Length = 276
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++++G + G F GSG +A ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDK-KGPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 274
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + K+NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIDTLKVNKVIE 108
>gi|114606761|ref|XP_001167241.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan
troglodytes]
gi|410220160|gb|JAA07299.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257296|gb|JAA16615.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287542|gb|JAA22371.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332769|gb|JAA35331.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 272
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 270
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 104
>gi|91983309|gb|ABE68720.1| 20S proteasome beta subunit [Arachis hypogaea]
Length = 223
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 21/222 (9%)
Query: 78 DHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSSTVPHNTSFQVIPVSSSILC 137
D +PP+ +++ L +TG G S S ++I ++ +L
Sbjct: 2 DRSHAPPV------VMAAAGFRLADTFHTGASMGGYISSQSVK------KIIEINPYMLG 49
Query: 138 TLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGL 197
T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR GL
Sbjct: 50 TMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG--------MGL 101
Query: 198 SFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYA 257
S GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA ILD+ YR DLS +EA
Sbjct: 102 SVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGILDSGYRYDLSVDEAVE 160
Query: 258 LATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
L AIYHA RD SGG V +Y + +GW++ DV D++
Sbjct: 161 LGRRAIYHATFRDGASGGVVSVYHVGPEGWKKWTGDDVGDLH 202
>gi|149627581|ref|XP_001509497.1| PREDICTED: proteasome subunit beta type-5-like [Ornithorhynchus
anatinus]
Length = 263
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRVSGVTFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
I+D Y DL E AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GIMDRGYSHDLEVEAAYDLARRAIYQATYRDAYSGGVVNLYHVREDGWIRVSSENVADLH 255
Query: 300 N 300
+
Sbjct: 256 D 256
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 LLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 95
>gi|440909598|gb|ELR59487.1| Proteasome subunit beta type-8 [Bos grunniens mutus]
Length = 276
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++++G + G F GSG +A ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 274
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + K+NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIE 108
>gi|390190130|dbj|BAM20999.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADCVYW LA+ C+ Y+ + + +T+ A+ LL NM+ YR
Sbjct: 55 KVIEINPYLLGTMSGSAADCVYWERVLAQHCRIYKLRNKEEITVSAASKLLSNMLAGYR- 113
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 114 -------GMGLSIGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGH 165
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DL+ EAY LA AIYHA RD +SGG V +Y + GW +V DV ++Y
Sbjct: 166 RYDLTVPEAYDLAQRAIYHATHRDAYSGGTVNMYHVKQDGWIKVSQEDVGELY 218
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSR TA I +Q K +
Sbjct: 19 FNHGTTTLAFKFQHGVIVAVDSRCTAGKYIDTQYFKKVIE 58
>gi|145353826|ref|XP_001421201.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581438|gb|ABO99494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 14/196 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + +T+R
Sbjct: 87 GPYISSQTVK-----KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVR 141
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + Y+ GLS GT++A +D + GP LY +D+ G ++G +F V
Sbjct: 142 AASKLLANTLYSYK--------GKGLSMGTMVAGWD-LNGPGLYYVDSEGTRLKGQRFSV 192
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD Y+ DL+ EEA L AIYHA RD SGG V +Y + GW +V
Sbjct: 193 GSGSLFAYGVLDQGYKWDLTVEEACELGRRAIYHATFRDAFSGGTVSVYHVGANGWTKVT 252
Query: 292 SRDVKDIYNDRKEAPP 307
DV +++ A P
Sbjct: 253 GDDVGELHFSYYPATP 268
>gi|24584895|ref|NP_724081.1| CG31742 [Drosophila melanogaster]
gi|22953838|gb|AAN11176.1| CG31742 [Drosophila melanogaster]
gi|68051313|gb|AAY84920.1| IP09987p [Drosophila melanogaster]
Length = 279
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+ V+ I+ T AG AADC YW +L +EC+ +E +Y+ + ++ AA + N+ +Y+
Sbjct: 104 KVVQVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKG 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GL G ++A + GP L +D+ GL I G F VGSGA A ILD+DY
Sbjct: 164 --------MGLCMGMMLAGWSP-EGPSLVYVDSNGLRIHGKLFAVGSGAPNALGILDSDY 214
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS+ EAY LA A+YHA DI SGG VRLY ++ W+ V ++D ++++
Sbjct: 215 RLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELH 267
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTT+GF Y GIIL DSRAT+ LI SQ ++K Q
Sbjct: 68 FDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQ 107
>gi|397474367|ref|XP_003808653.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pan paniscus]
Length = 276
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRMNKVIE 108
>gi|440789731|gb|ELR11030.1| proteasome endopeptidase subunit, putative [Acanthamoeba
castellanii str. Neff]
Length = 275
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 109/185 (58%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q + + + +VI ++ +L T+AG AADC YW L + + Y+ + + MT+ A+
Sbjct: 82 TQGTYIASQSVQKVIRINPFLLGTMAGGAADCSYWERELGRRTRLYQLRNKERMTVAAAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N++ YR GLS G+++ +D+ GP ++ +D+ G ++G KF VGSG
Sbjct: 142 KVLSNILYYYRN--------QGLSVGSMICGWDK-RGPNIFYVDSDGTRLKGDKFSVGSG 192
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D YR DL+ EEA L AI+HA RD +SGG + +Y I+ QGW+ + ++D
Sbjct: 193 GTYAYGVMDAGYRFDLTVEEACELGRRAIFHAAHRDAYSGGTINVYHISEQGWKHISAQD 252
Query: 295 VKDIY 299
D+Y
Sbjct: 253 SNDLY 257
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + GI++A DSRAT I SQ + K +
Sbjct: 61 GTTTLSFVFQGGIVVAVDSRATQGTYIASQSVQKVIR 97
>gi|114606757|ref|XP_001167272.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Pan
troglodytes]
gi|410220158|gb|JAA07298.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257298|gb|JAA16616.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287540|gb|JAA22370.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332767|gb|JAA35330.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 276
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 108
>gi|390190128|dbj|BAM20998.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADCVYW LA+ C+ Y+ + + +T+ A+ LL NM+ YR
Sbjct: 55 KVIEINPYLLGTMSGSAADCVYWERVLAQHCRIYKLRNKEQITVSAASKLLSNMLAGYR- 113
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 114 -------GMGLSIGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGH 165
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DL+ EAY LA AIYHA RD +SGG V +Y + GW +V DV ++Y
Sbjct: 166 RYDLTLPEAYDLAQRAIYHATHRDAYSGGTVNMYHVKQDGWIKVSQEDVGELY 218
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSR TA I +Q K +
Sbjct: 19 FNHGTTTLAFKFQHGVIVAVDSRCTAGKYIDTQYFKKVIE 58
>gi|225710552|gb|ACO11122.1| Proteasome subunit beta type-5 precursor [Caligus rogercresseyi]
Length = 278
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 127/247 (51%), Gaps = 24/247 (9%)
Query: 68 RSHCVAETQQDHFLSPPLSQSSQHIIS------GDSCELLHPV------YTGGERCGPFS 115
RS + + D PP+S + ++ S G L H Y GG S
Sbjct: 29 RSIISSLSPVDALAMPPMSDPAGYLNSLGANGEGPKINLAHGTTTLGFKYEGGTILAVDS 88
Query: 116 QSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRH 172
++++ V + ++I VS +L T+AG AADC YW LA EC+ YE + +++
Sbjct: 89 RATSGGYVGSGSVRKIIEVSDYLLATMAGGAADCTYWDRVLAMECRLYELRNHCRISVAA 148
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVG 232
A+ LL N +Y+ GLS G ++A YD+ GP+LY +D+ G G F VG
Sbjct: 149 ASKLLANNAYRYKG--------MGLSMGAMIAGYDK-RGPELYYVDSEGSRTPGNLFSVG 199
Query: 233 SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
SG+ YA +LD DYR DL++EEAY L AI HA RD SGG +R+ + +G + +
Sbjct: 200 SGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAASGGIIRVMHVTKEGKKMISE 259
Query: 293 RDVKDIY 299
D K+++
Sbjct: 260 EDCKELH 266
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTLGF+Y G ILA DSRAT+ + S + K + S
Sbjct: 70 GTTTLGFKYEGGTILAVDSRATSGGYVGSGSVRKIIEVS 108
>gi|195579820|ref|XP_002079757.1| GD24120 [Drosophila simulans]
gi|194191766|gb|EDX05342.1| GD24120 [Drosophila simulans]
Length = 279
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ V+ ++ T+AG AADC YW +L +EC+ +E +Y+ + +R AA + N+ +Y+
Sbjct: 104 KIVQVNQYMMGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAAKYICNVATEYKG 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
G+ G ++A + GP L +D+TGL + G F VGSGA A ILD+DY
Sbjct: 164 --------MGICMGMMLAGWAP-EGPSLVYVDSTGLRLHGKLFAVGSGAPIALGILDSDY 214
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS+ EAY LA ++YHA DI SGG VRLY ++ W+ V ++D ++++
Sbjct: 215 RLDLSDTEAYDLAFLSVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELH 267
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTT+GF Y GIIL DSRATA I SQ ++K Q
Sbjct: 68 FDHGTTTVGFVYQGGIILCVDSRATAGSFIGSQSMHKIVQ 107
>gi|426376393|ref|XP_004054985.1| PREDICTED: proteasome subunit beta type-5 isoform 6 [Gorilla
gorilla gorilla]
Length = 275
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 97 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 157 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 208 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 267
Query: 300 NDRKEAPP 307
+ P
Sbjct: 268 EKYSGSAP 275
>gi|340380909|ref|XP_003388964.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 280
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 23/235 (9%)
Query: 79 HFLSPPLSQSS------QHIISGDSCELLHPVYTGGER---CGPFSQSSTVPHNTSFQVI 129
HF+SP +S SS H + + + H V + G + S TV +VI
Sbjct: 48 HFVSPFMSDSSDCKIKFNHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVK-----KVI 102
Query: 130 PVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNH 189
++ +L T+AG AADC YW L+ EC+ YE + + +++ A+ LL NMV Y+
Sbjct: 103 EINPYLLGTMAGGAADCAYWERQLSFECRIYELRNKERISVAAASKLLANMVSYYKG--- 159
Query: 190 SSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPD 249
GLS GT++ +D+ GP +Y +D G F VGSG+ YA ++D+ Y+
Sbjct: 160 -----YGLSMGTMICGWDK-KGPGIYYVDTDGNRFTNNIFSVGSGSTYAYGVIDSTYKWS 213
Query: 250 LSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+S EEA L AIYHA RD +SGG V LY + GW +V DVK ++ +E
Sbjct: 214 MSIEEARELGKRAIYHATYRDSYSGGVVNLYHVQEDGWTKVSQTDVKSLHYQYEE 268
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 64 FNHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 103
>gi|146104190|ref|XP_001469755.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|398024254|ref|XP_003865288.1| proteasome beta 5 subunit, putative [Leishmania donovani]
gi|134074125|emb|CAM72867.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|322503525|emb|CBZ38611.1| proteasome beta 5 subunit, putative [Leishmania donovani]
Length = 302
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG S++ST + T +V+ ++ +L TLAG AADC YW L EC+ +E
Sbjct: 107 FNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVLGMECRLWE 166
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +T+ A+ +L N+ YR NH GLS GT++A +D+ GP LY +D+ G
Sbjct: 167 LRNGSRITVAAASKILANITYAYR--NH------GLSMGTMLAGWDQ-FGPSLYYVDDKG 217
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
++ F VGSG+ YA +LDT YR DLS E+A LA +I+HA RD SGG V +Y
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 282 INGQGWQQVLSRDVKDIYN 300
++ +GW ++ D +Y+
Sbjct: 278 VHEKGWTKISRDDQTKLYD 296
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRA+ I SQ + K +
Sbjct: 99 GTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLE 135
>gi|242011050|ref|XP_002426270.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
gi|212510333|gb|EEB13532.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
Length = 271
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ +++ +L TLAG AADCVYW LAK+C+ +E + +++ A+ L+ N
Sbjct: 89 IGSQTMKKIVEINNYLLGTLAGGAADCVYWDRVLAKQCRMFELRNHERISVAAASKLMTN 148
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV Y+ GLS G ++A +D+ G LY + + G G F VGSG+ YA
Sbjct: 149 MVYNYK--------GMGLSMGMMIAGWDK-RGASLYYVSDDGTRTSGNVFSVGSGSIYAF 199
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI- 298
+LDT Y+ DL ++EAY LA +IYHA RD +SGG +R+Y I GW + D K++
Sbjct: 200 GVLDTGYKWDLEDKEAYDLAQRSIYHATYRDAYSGGIIRVYHIKETGWVNISEIDCKELH 259
Query: 299 YNDRKE 304
Y +KE
Sbjct: 260 YKYQKE 265
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGFR+ G+ILA DSRAT I SQ + K +
Sbjct: 63 GTTTLGFRFKNGVILAVDSRATGGQCIGSQTMKKIVE 99
>gi|326427299|gb|EGD72869.1| LMP X protein [Salpingoeca sp. ATCC 50818]
Length = 292
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T+AG AADC YW LAKEC+ +E + +++ A+
Sbjct: 100 SAGSYIASQTVKKVIEINPYLLGTMAGGAADCSYWERVLAKECRLFELRNGERISVAAAS 159
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V YR GLS GT++ +D+ GP L+ +D+ G + F VGSG
Sbjct: 160 KILANIVYHYRG--------MGLSMGTMICGWDK-KGPGLFYVDSDGTRLTNNLFSVGSG 210
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
+ YA +LD YR DLS EEA+ LA AIYHA RD +SGG + LY + GW+++L+
Sbjct: 211 STYAYGVLDAGYRWDLSVEEAHELARRAIYHATFRDAYSGGHINLYHMKETGWERILN 268
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G+I+A DSRA+A I SQ + K +
Sbjct: 76 FAHGTTTLGFKFQHGVIIAVDSRASAGSYIASQTVKKVIE 115
>gi|338718017|ref|XP_003363742.1| PREDICTED: proteasome subunit beta type-8-like isoform 2 [Equus
caballus]
Length = 208
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + S QVI ++ +L T++G AADC YW LAKEC+ Y + +++ A+
Sbjct: 25 SAGSYIGECASQQVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAAS 84
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ +YR GLS G+++ +D+ GP LY +D G + G F GSG
Sbjct: 85 KLLSNMMCQYR--------GMGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSG 135
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR +LS EEAY L AI HA RD +SGG V +Y + GW +V S D
Sbjct: 136 NSYAYGVMDSGYRNNLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTD 195
Query: 295 VKDIYNDRKEAP 306
V D+ + +EA
Sbjct: 196 VSDLLHQYREAS 207
>gi|220881|dbj|BAA01572.1| proteasome subunit RC1 [Rattus sp.]
Length = 208
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 37 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYR- 95
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 96 -------GMGLSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 147
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY LA AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 148 RQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKVESTDVSDLLHKYREA 206
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 4 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIE 40
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 104 VYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
V+ GG S++S V T +V+PVSSSIL T+AG AADC +W+ L ++ + +
Sbjct: 1340 VFQGGVIAAVDSRASIGNFVGSKTVQKVLPVSSSILGTMAGGAADCSFWIRFLRQQARLH 1399
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYR-TGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDN 219
E + + M++ ++ +L N + +YR G+ LS G+++ YD G +Y +DN
Sbjct: 1400 EVQNKRSMSVARSSRILSNALYQYRGLGD--------LSVGSMIMGYDAREGFSIYYVDN 1451
Query: 220 TGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
TG I G F VGSG+ +A ILDT+ R D++E EA +L AI HA RD SGG + +
Sbjct: 1452 TGARIRGEVFSVGSGSTFALGILDTELRYDMTEAEAISLGIKAIRHATARDAMSGGYIGV 1511
Query: 280 YKINGQGWQQVLSRDV 295
Y I +GW +V S D+
Sbjct: 1512 YLITKEGWAKVYSEDL 1527
>gi|308811755|ref|XP_003083185.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
gi|116055064|emb|CAL57460.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
[Ostreococcus tauri]
Length = 294
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + +T+R
Sbjct: 86 GPYISSQTVK-----KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVR 140
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + Y+ GLS GT++A +D + GP LY +D+ G ++G +F V
Sbjct: 141 AASKLLANTLYSYK--------GRGLSMGTMIAGWD-LNGPGLYYVDSEGTRLKGQRFSV 191
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD YR DLS +EA L AIYHA RD SGG V +Y + GW +V
Sbjct: 192 GSGSLFAYGVLDQGYRWDLSVKEACELGRRAIYHATFRDAFSGGTVSVYHVGKNGWTKVT 251
Query: 292 SRDVKDIY 299
DV +++
Sbjct: 252 GDDVGELH 259
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GI++A DSRA+ I SQ + K +
Sbjct: 63 GTTTLGFIFEHGIVIAVDSRASQGPYISSQTVKKVIE 99
>gi|255089791|ref|XP_002506817.1| predicted protein [Micromonas sp. RCC299]
gi|226522090|gb|ACO68075.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 14/196 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + +++
Sbjct: 85 GPYISSQTVK-----KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVA 139
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + YR GLS GT++A +D + GP LY +D+ G ++G +F V
Sbjct: 140 GASKLLANTLYGYRG--------QGLSMGTMVAGWD-LKGPGLYYVDSDGTRLKGQRFSV 190
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD YR DLS EEA L AIYHA RD SGG + +Y +N GW +V
Sbjct: 191 GSGSLFAYGVLDQGYRWDLSVEEACELGRRAIYHATFRDAFSGGTISVYHVNENGWTKVS 250
Query: 292 SRDVKDIYNDRKEAPP 307
DV +++ + A P
Sbjct: 251 GTDVGELHFEYYPADP 266
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + G+++A DSRA+ I SQ + K +
Sbjct: 62 GTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIE 98
>gi|113196863|gb|ABI31729.1| low molecular mass protein 7 [Sus scrofa]
Length = 249
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 78 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYR- 136
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 137 -------GMGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGH 188
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 189 RYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 247
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 45 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 81
>gi|194758868|ref|XP_001961680.1| GF14807 [Drosophila ananassae]
gi|190615377|gb|EDV30901.1| GF14807 [Drosophila ananassae]
Length = 308
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+S +L T+AG AADC YW L +E + YE +++ M ++ AA L N+ +YR
Sbjct: 104 KVVPISDYMLSTIAGGAADCSYWDRVLTREVRLYELRHKERMPVKSAARFLANIAYQYRG 163
Query: 187 GNHSSKIPNGLSFGTLMAAY-DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
GLS ++A + DE GP L +D GL + G F GSG E A +LDT+
Sbjct: 164 --------MGLSMSIILAGWSDE--GPSLVYVDADGLSVPGKLFSAGSGGECALGLLDTE 213
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYND 301
YR +S+E+A+ LA +IYHA RD+++GG V Y ++ +GW+ V ++D +++ D
Sbjct: 214 YRYKMSDEKAFDLAFRSIYHASSRDVYTGGVVSCYHLDKKGWRLVAAKDSEELRED 269
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
F GTTTLGF Y GI+L DSRATA I S + K
Sbjct: 68 FHHGTTTLGFIYQGGIVLCVDSRATAGAYIGSHGMKK 104
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 10/184 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V T +V+ ++ ++ T+AG AADC +W L K CK YE + +T A+
Sbjct: 83 SMGSYVSSQTVRKVLHITDRLIGTMAGGAADCQFWERHLGKLCKLYELRNNQRITTAAAS 142
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N++ Y+ GLS GT++A YD + GP LYM+D+ G ++ F VGSG
Sbjct: 143 KMLANIMYSYK--------GYGLSCGTMIAGYDAVTGPALYMVDDQGTRLKNNMFSVGSG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA I+D Y+ DL+ +EA AL AIYHA +D SGG VR+Y ++ GW + D
Sbjct: 195 STYAYGIVDAGYKHDLTLDEAVALGKRAIYHATNKDGASGGYVRVYHVHKDGW--TIMED 252
Query: 295 VKDI 298
+D+
Sbjct: 253 GQDV 256
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
F GTTTLGF + G+++A DSRA+ + SQ + K
Sbjct: 59 FNKGTTTLGFVFDGGVLIAVDSRASMGSYVSSQTVRK 95
>gi|354487488|ref|XP_003505905.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-8-like
[Cricetulus griseus]
Length = 271
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMVCGWDKK-GPGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V + DV D+ + +EA
Sbjct: 212 RQDLSPEEAYDLGRRAIVHATHRDCYSGGVVNMYHMKEDGWVKVETSDVSDLMHKYREA 270
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIVAVDSRASAGTYISTLRVNKVIE 104
>gi|146165617|ref|XP_001015486.2| proteasome, putative [Tetrahymena thermophila]
gi|146145426|gb|EAR95241.2| proteasome, putative [Tetrahymena thermophila SB210]
Length = 297
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 136/276 (49%), Gaps = 40/276 (14%)
Query: 28 NDLIVSQKLNKFCQSSLGDSCELLHPVY--TGGERCGQSYSQRSHCVAETQQDHFLSPPL 85
+D++ S F Q L D +L+H + G ER + + + +A Q +
Sbjct: 32 DDIVKSNGQFGFEQVPLSDPTQLVHNIKDAKGPERSLMEFKKGTTTLAFKFQGGVIVAVD 91
Query: 86 SQSSQHIISGDSCELLHPVYTGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAAD 145
S++SQ G F S TV ++I ++ +L T+AG AAD
Sbjct: 92 SRASQ---------------------GSFDASETVR-----KIIEINDQLLGTMAGGAAD 125
Query: 146 CVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAA 205
C +W LA EC+ Y+ + R +++ A+ +L+N++ YR NH GLS G ++
Sbjct: 126 CQFWEQYLAIECRKYQLQNREKVSVAAASRILINILYSYR--NH------GLSMGCMLTG 177
Query: 206 YDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYH 265
+D G QLY LDN G I+G F GSG+ YA +LD +Y +LS +EA L AIYH
Sbjct: 178 WDH-EGAQLYYLDNDGQRIKGNIFSCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYH 236
Query: 266 ACRRDIHSGGCVRLYKI---NGQGWQQVLSRDVKDI 298
A RD SGG VR+Y + N QG + D +D+
Sbjct: 237 ATHRDAGSGGVVRIYHVHAPNAQGKGWTIIEDGEDV 272
>gi|344253005|gb|EGW09109.1| Proteasome subunit beta type-8 [Cricetulus griseus]
Length = 228
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 58 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYR- 116
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 117 -------GMGLSMGSMVCGWDK-KGPGLYYVDENGTRLSGQMFSTGSGNTYAYGVMDSGY 168
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V + DV D+ + +EA
Sbjct: 169 RQDLSPEEAYDLGRRAIVHATHRDCYSGGVVNMYHMKEDGWVKVETSDVSDLMHKYREA 227
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 25 GTTTLAFKFQHGVIVAVDSRASAGTYISTLRVNKVIE 61
>gi|311260174|ref|XP_001924154.2| PREDICTED: proteasome subunit beta type-8 [Sus scrofa]
gi|147225184|emb|CAN13316.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGH 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 274
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|401420044|ref|XP_003874511.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490747|emb|CBZ26011.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 302
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 12/199 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG S++ST + T +V+ ++ +L TLAG AADC YW L EC+ +E
Sbjct: 107 FNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVLGMECRLWE 166
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +T+ A+ +L N+ YR NH GLS GT++A +D GP LY +D+ G
Sbjct: 167 LRNGSRITVAAASKILANITYAYR--NH------GLSMGTMLAGWDR-FGPSLYYVDDKG 217
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
++ F VGSG+ YA +LDT YR DLS E+A LA +I+HA RD SGG V +Y
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 282 INGQGWQQVLSRDVKDIYN 300
++ +GW ++ D +Y+
Sbjct: 278 VHEKGWTKISRDDQTKLYD 296
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRA+ I SQ + K +
Sbjct: 99 GTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLE 135
>gi|297818166|ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
gi|297322804|gb|EFH53225.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL NM+ YR
Sbjct: 91 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRG 150
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +DN G ++G +F VGSG+ YA +LD+ Y
Sbjct: 151 --------MGLSVGTMIAGWDET-GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 201
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA +IYHA RD SGG +Y + QGW+++ DV +++
Sbjct: 202 KFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWKKLSGDDVGELH 254
>gi|380814846|gb|AFE79297.1| proteasome subunit beta type-8 isoform E2 proprotein [Macaca
mulatta]
Length = 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRKAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDTLRVNKVIE 108
>gi|147225186|emb|CAN13318.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 208
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 37 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYR- 95
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 96 -------GMGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGH 147
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAP 306
R DLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 148 RYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREAS 207
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 4 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 40
>gi|223993127|ref|XP_002286247.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
gi|220977562|gb|EED95888.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
Length = 220
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 101 LHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKEC 157
L V+ GG S++S V T+ +V+PVS +IL ++AG AADC +W+ L E
Sbjct: 21 LSFVFQGGIVVAVDSRASIGNFVGSKTTQKVLPVSRNILGSMAGGAADCSFWIRYLRSEA 80
Query: 158 KGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYML 217
K +E G+++ A+ +L N++ + R + LS GT++ Y G +Y +
Sbjct: 81 KIHELYDGKGISVARASRVLSNILYQNRGMD--------LSVGTMIMGYHSRDGFSIYYV 132
Query: 218 DNTGLLIEGTKFCVGSGAEYAQAILDTDY-RPDLSEEEAYALATSAIYHACRRDIHSGGC 276
DNTG+ I+G F VGSG+ +A ILDT+ R D++EEEA AL AI HA RD SGG
Sbjct: 133 DNTGVRIKGDMFSVGSGSTFALGILDTEENRFDMTEEEAVALGIKAIRHATLRDAMSGGY 192
Query: 277 VRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+ +Y I GW++V S D+ + + R E
Sbjct: 193 IGVYLITKDGWRKVFSEDLASVSSRRVE 220
>gi|4758970|ref|NP_004150.1| proteasome subunit beta type-8 isoform E1 proprotein [Homo sapiens]
gi|34637|emb|CAA47026.1| LMP7 [Homo sapiens]
gi|36057|emb|CAA44482.1| RING10 [Homo sapiens]
gi|38481|emb|CAA78705.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054746|emb|CAA60786.1| LMP7 [Homo sapiens]
gi|12654559|gb|AAH01114.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Homo sapiens]
gi|119624049|gb|EAX03644.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_a [Homo
sapiens]
gi|228159|prf||1717394A RING10 gene
Length = 272
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 270
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 104
>gi|301757125|ref|XP_002914391.1| PREDICTED: proteasome subunit beta type-8-like [Ailuropoda
melanoleuca]
gi|281338481|gb|EFB14065.1| hypothetical protein PANDA_002294 [Ailuropoda melanoleuca]
Length = 276
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NMV +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ LS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 MD--------LSMGSMICGWDKK-GPGLYYVDADGTRLSGDMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
RPDLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +E
Sbjct: 216 RPDLSPEEAYELGRRAIVYATHRDSYSGGVVNMYHVMEDGWVKVESTDVSDLLHQYRE 273
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ +G+I+A DSRATA I + ++NK +
Sbjct: 72 GTTTLAFKFQQGVIVAVDSRATAGSYISTSRINKVIE 108
>gi|154345734|ref|XP_001568804.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066146|emb|CAM43936.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 12/199 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG S++ST + T +V+ ++ +L TLAG AADC YW L EC+ +E
Sbjct: 107 FDGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVLGMECRLWE 166
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +++ A+ +L N+ YR NH GLS GT++A +D+ GP LY +D+ G
Sbjct: 167 LRNGSRISVAAASKILANITYAYR--NH------GLSMGTMVAGWDQ-FGPSLYYVDDKG 217
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
++ F VGSG+ YA +LDT YR DLS E+A LA +I+HA RD SGG V +Y
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYH 277
Query: 282 INGQGWQQVLSRDVKDIYN 300
I+ GW ++ D +Y+
Sbjct: 278 IHANGWTKISRDDQTKLYD 296
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRA+ I SQ + K +
Sbjct: 99 GTTTLAFRFDGGIIVAVDSRASTGQYIASQTVLKVLE 135
>gi|348575985|ref|XP_003473768.1| PREDICTED: proteasome subunit beta type-8-like [Cavia porcellus]
Length = 273
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 102 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLANMMSQYRG 161
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA +LD+ Y
Sbjct: 162 --------MGLSMGSMIIGWDK-KGPGLYYVNEDGTRLPGHMFSSGSGNTYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDLS EEAY L AI A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 213 RPDLSPEEAYDLGRRAIVQATHRDNYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 271
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA + I + ++NK +
Sbjct: 69 GTTTLAFKFQHGVIVAVDSRATAGNYISTIRVNKVIE 105
>gi|15231544|ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
gi|75273433|sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S
proteasome beta subunit E-2; AltName: Full=Proteasome
epsilon-2 chain; Flags: Precursor
gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|9294292|dbj|BAB02194.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|21553804|gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsis thaliana]
gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|332643626|gb|AEE77147.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
Length = 273
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL NM+ YR
Sbjct: 90 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRG 149
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +DN G ++G +F VGSG+ YA +LD+ Y
Sbjct: 150 --------MGLSVGTMIAGWDET-GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 200
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA +IYHA RD SGG +Y + QGW ++ DV +++
Sbjct: 201 KFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDVGELH 253
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 93
>gi|147899854|ref|NP_001084323.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Xenopus laevis]
gi|971307|dbj|BAA07945.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|38014491|gb|AAH60388.1| PSMB8 protein [Xenopus laevis]
Length = 271
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 12/195 (6%)
Query: 110 RCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMT 169
R S ST+ N +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + ++
Sbjct: 85 RASAGSYISTIKFN---KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYQLRNNSRIS 141
Query: 170 IRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF 229
+ A+ L+ NM+ +YR GLS G+++ +D+ GP LY +D+ G + G F
Sbjct: 142 VSAASKLMCNMMLQYRG--------TGLSVGSMICGWDK-KGPGLYYVDDNGTRLCGDIF 192
Query: 230 CVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
GSG YA ++D+ YR DL+ EEAY L AI +A RD +SGGCV LY + GW +
Sbjct: 193 STGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDAYSGGCVNLYHMKEDGWVK 252
Query: 290 VLSRDVKDIYNDRKE 304
+ DV D+ + E
Sbjct: 253 IGQFDVSDLLHKFTE 267
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + K NK +
Sbjct: 66 GTTTLAFKFQHGVIVAVDSRASAGSYISTIKFNKVIE 102
>gi|73747875|ref|NP_683720.2| proteasome subunit beta type-8 isoform E2 proprotein [Homo sapiens]
gi|334302881|sp|P28062.3|PSB8_HUMAN RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
molecular mass protein 7; AltName: Full=Macropain
subunit C13; AltName: Full=Multicatalytic endopeptidase
complex subunit C13; AltName: Full=Proteasome component
C13; AltName: Full=Proteasome subunit beta-5i; AltName:
Full=Really interesting new gene 10 protein; Flags:
Precursor
gi|38482|emb|CAA78706.1| proteasome subunit LMP7 [Homo sapiens]
gi|1054747|emb|CAA60787.1| LMP7 [Homo sapiens]
gi|119624050|gb|EAX03645.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7), isoform CRA_b [Homo
sapiens]
gi|208967166|dbj|BAG73597.1| proteasome (prosome, macropain) subunit beta type 8 [synthetic
construct]
Length = 276
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 108
>gi|449435051|ref|XP_004135309.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
gi|449494897|ref|XP_004159677.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
Length = 272
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + ++ ++I ++S +L T+AG AADC +W +L +C+ +E + + +++ A+
Sbjct: 77 SMGGYISSQSAKKIIEINSYMLGTMAGGAADCQFWHRNLGIKCRRHELENKRRISVTGAS 136
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G ++GT+F VGSG
Sbjct: 137 KLLANILYSYR--------GMGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSG 187
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD Y+ DLS EEA LA AIYHA RD SGG +Y + GW+++ D
Sbjct: 188 SPYAYCVLDNGYQYDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDD 247
Query: 295 VKDIY 299
V +++
Sbjct: 248 VGELH 252
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ K +
Sbjct: 56 GTTTLAFTFKEGVMVAADSRASMGGYISSQSAKKIIE 92
>gi|61357317|gb|AAX41370.1| proteasome subunit beta type 8 [synthetic construct]
Length = 272
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 270
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 104
>gi|596140|gb|AAA56777.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 108
>gi|308321636|gb|ADO27969.1| proteasome subunit beta type-5 [Ictalurus furcatus]
Length = 266
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 86 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL 145
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 146 ANMVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDMFAVGSGSMY 196
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A +LD+ +R DL+ EEA L AIY A RD +SGG V LY+++ +GW++V DV
Sbjct: 197 AYGVLDSGHRTDLTIEEACDLGRRAIYQATFRDAYSGGQVNLYRVHSEGWERVSQDDV 254
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 59 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 98
>gi|786582|gb|AAB33092.1| proteasome subunit MB1 [Homo sapiens]
Length = 215
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG A DC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 37 IASQTVKKVIEINPYLLGTMAGGAGDCSFWERLLARQCRIYELRNKERISVAAASKLLAN 96
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS G+++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 97 MVYQYK--------GMGLSMGSMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 147
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 148 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 207
Query: 300 NDRKEAPP 307
+ P
Sbjct: 208 EKYSGSTP 215
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 8 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 47
>gi|596142|gb|AAA56778.1| proteasome subunit LMP7 [Homo sapiens]
Length = 276
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 108
>gi|340502310|gb|EGR29012.1| proteasome subunit beta type, putative [Ichthyophthirius
multifiliis]
Length = 286
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
SQ S T ++I ++ +L T+AG AADC +W LA +C+ Y+ ++ +++ A+
Sbjct: 89 SQGSFDASETVRKIIEINEFLLGTMAGGAADCQFWEQYLAIQCRKYQLQHGERVSVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L+N++ Y+ GLS G ++A +D GPQLY LDN G I+G F VGSG
Sbjct: 149 RILINILYGYKN--------QGLSVGCMLAGWDN-QGPQLYYLDNDGSRIKGDLFSVGSG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+ YA +LD+ Y+ DLS +EA L AIYHA RD SGG VR+Y ++ GW
Sbjct: 200 STYAYGVLDSHYKWDLSLKEAVELGKRAIYHATFRDAGSGGVVRVYHVHQGGW 252
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFR+ G++LA DSRA+ S+ + K +
Sbjct: 65 FKKGTTTLGFRFQGGVLLAVDSRASQGSFDASETVRKIIE 104
>gi|3914430|sp|O24361.1|PSB5_SPIOL RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S
proteasome subunit E; AltName: Full=Proteasome epsilon
chain; Flags: Precursor
gi|2285800|dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea]
Length = 272
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D++ EEA LA AIYHA RD SGG V +Y + GW++V DV D++
Sbjct: 199 KYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDVGDLH 251
>gi|195431433|ref|XP_002063746.1| GK15836 [Drosophila willistoni]
gi|194159831|gb|EDW74732.1| GK15836 [Drosophila willistoni]
Length = 283
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +V+ ++ +L TLAG AADCVYW LAKEC+ +E + + +++ A+ ++ N+ +
Sbjct: 103 TMKKVVEINQFLLGTLAGGAADCVYWDRVLAKECRMHELRNKERISVAAASKIMANIAHE 162
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD
Sbjct: 163 YKN--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTAGNLFSVGSGSLYAYGVLD 213
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI---YN 300
+ Y +L +EEA L +IYHA RD +SGG +R+Y + GW + + D ++ Y
Sbjct: 214 SGYHWNLKDEEAQELGRRSIYHATFRDAYSGGIIRVYHMTPTGWINISNTDCMELHYKYK 273
Query: 301 DRKEA 305
++KEA
Sbjct: 274 EQKEA 278
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKVVE 109
>gi|195344758|ref|XP_002038946.1| GM17255 [Drosophila sechellia]
gi|194134076|gb|EDW55592.1| GM17255 [Drosophila sechellia]
Length = 279
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+ V+ ++ T+AG AADC YW +L +EC+ +E +Y+ + +R AA + N+ +Y+
Sbjct: 104 KVMQVNQYMMGTMAGGAADCTYWDRALTRECRLHELRYKERLPVRSAAKYICNVATEYKG 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
G+ G ++A + GP L +D+ GL + G F VGSGA A ILD+DY
Sbjct: 164 --------MGICMGMMLAGWAP-EGPSLVYVDSNGLRLHGKLFAVGSGAPIALGILDSDY 214
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS+ EAY LA ++YHA DI SGG VRLY ++ W+ V ++D ++++
Sbjct: 215 RLDLSDTEAYDLAFLSVYHATMTDIFSGGVVRLYHMDQGNWRNVANKDCQELH 267
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTT+GF Y GIIL DSRATA + I S ++K Q
Sbjct: 68 FDHGTTTVGFVYQGGIILCVDSRATAGNFIGSHSMHKVMQ 107
>gi|441594219|ref|XP_003272205.2| PREDICTED: proteasome subunit beta type-8 isoform 1 [Nomascus
leucogenys]
Length = 276
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSIGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + + NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDTLRTNKVIE 108
>gi|356516569|ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
Length = 272
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 RYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELH 251
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|356508794|ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
Length = 272
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 RYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELH 251
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|296411495|ref|XP_002835466.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629250|emb|CAZ79623.1| unnamed protein product [Tuber melanosporum]
Length = 282
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q S + T +VI ++ +L T+AG AADC YWL L EC+ +E +++ +++ A+
Sbjct: 89 TQGSWISSQTVKKVIEINDKMLGTMAGGAADCQYWLGYLGVECRLHELRHKRRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V Y+ GLS GT++A + GP LY +D+ G + G FCVGSG
Sbjct: 149 KILSNLVYTYKG--------MGLSMGTMIAGVTALEGPALYYIDSDGTRLAGNLFCVGSG 200
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +LD +Y DLS EEA AL + +I A RD +SGG + LY + +GW + D
Sbjct: 201 QTFAYGVLDREYDYDLSTEEALALGSRSILAATHRDAYSGGSINLYHVKEEGWTRHGFTD 260
Query: 295 VKDIYNDRK 303
++ K
Sbjct: 261 TNPVFWKTK 269
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRAT I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATQGSWISSQTVKKVIE 104
>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 276
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ S+L T++G AADC YW LAKEC+ Y + +++ A+ LL NMV +YR
Sbjct: 105 KVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ LS G+++ +D+ GP LY +D G + G F GSG+ YA ++D+ Y
Sbjct: 165 MD--------LSMGSMICGWDKK-GPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+P LS EEAY L AI +A RD +SGG + +Y + GW +V S DV ++ + +EA
Sbjct: 216 QPSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQYQEA 274
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA + I S ++NK +
Sbjct: 69 MVHGTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIE 108
>gi|357125268|ref|XP_003564317.1| PREDICTED: proteasome subunit beta type-5-A-like [Brachypodium
distachyon]
Length = 277
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I ++
Sbjct: 79 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGTKCRLHELANKRRISIAGSS 138
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N++ YR GLS GT++A +DE GP LY +D+ G ++G +F VGSG
Sbjct: 139 KMLANILYSYRG--------MGLSIGTMIAGFDET-GPGLYYVDSEGARLKGNRFSVGSG 189
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD Y+ ++S EEA LA AIYHA RD SGGCV +Y + GW+++ D
Sbjct: 190 SLYAYGILDEGYKFNMSVEEAGELARRAIYHATFRDGASGGCVSVYHVGPNGWKKLSGDD 249
Query: 295 VKDIY 299
V +++
Sbjct: 250 VGELH 254
>gi|6653277|gb|AAF22654.1| interferon-gamma inducible proteasome subunit LMP7 [Bos taurus]
Length = 193
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 102/172 (59%), Gaps = 9/172 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC+YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 30 KVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR- 88
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG +A ++D+ Y
Sbjct: 89 -------GMGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGY 140
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
RPDLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+
Sbjct: 141 RPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDL 192
>gi|296803825|ref|XP_002842765.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
gi|238846115|gb|EEQ35777.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
Length = 283
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYNYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA AL + +I A RD +SGG + LY + +GW + D I+
Sbjct: 205 GVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFSDTNPIF 264
Query: 300 NDRK 303
+ K
Sbjct: 265 WNTK 268
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|15222152|ref|NP_172765.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|3914425|sp|O23717.1|PSB5A_ARATH RecName: Full=Proteasome subunit beta type-5-A; AltName: Full=20S
proteasome beta subunit E-1; AltName: Full=Proteasome
component E; AltName: Full=Proteasome epsilon-1 chain;
Flags: Precursor
gi|4850389|gb|AAD31059.1|AC007357_8 Identical to gb|Y13695 multicatalytic endopeptidase complex,
proteasome precursor, beta subunit (prce) from
Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
from this gene [Arabidopsis thaliana]
gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421117|gb|AAC32072.1| 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
gi|23297641|gb|AAN12998.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|332190844|gb|AEE28965.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 274
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 104 VYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
++ GG S++S + + ++I ++ +L T+AG AADC +W +L +C+ +
Sbjct: 64 IFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 123
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
E + +++ A+ LL NM+ YR GLS GT++A +DE GP LY +DN
Sbjct: 124 ELANKRRISVSGASKLLANMLYSYRG--------MGLSVGTMIAGWDET-GPGLYYVDNE 174
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G ++G +F VGSG+ YA +LD+ Y+ D+S EEA LA +IYHA RD SGG +Y
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234
Query: 281 KINGQGWQQVLSRDVKDIY 299
+ +GW ++ DV +++
Sbjct: 235 HVGPEGWTKLSGDDVGELH 253
>gi|334182541|ref|NP_001184978.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|332190845|gb|AEE28966.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 298
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL NM+ YR
Sbjct: 114 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRG 173
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +DN G ++G +F VGSG+ YA +LD+ Y
Sbjct: 174 --------MGLSVGTMIAGWDET-GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 224
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA +IYHA RD SGG +Y + +GW ++ DV +++
Sbjct: 225 KYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELH 277
>gi|346324481|gb|EGX94078.1| proteasome component PRE2 precursor [Cordyceps militaris CM01]
Length = 284
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINNVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +DN G + G FCVGSG +A
Sbjct: 156 LVYSYK--------GMGLSMGTMCAGVTAEEGPALYYVDNDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L + +I A RD +SGG + LY + +GW + RD I+
Sbjct: 208 GVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGSINLYHVKQEGWVKHGFRDTNPIF 267
Query: 300 NDRK 303
K
Sbjct: 268 WQTK 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|15292875|gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length = 274
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 104 VYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
++ GG S++S + + ++I ++ +L T+AG AADC +W +L +C+ +
Sbjct: 64 IFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 123
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
E + +++ A+ LL NM+ YR GLS GT++A +DE GP LY +DN
Sbjct: 124 ELANKRRISVSGASKLLANMLYSYRG--------MGLSVGTMIAGWDET-GPGLYYVDNE 174
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G ++G +F VGSG+ YA +LD+ Y+ D+S EEA LA +IYHA RD SGG +Y
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234
Query: 281 KINGQGWQQVLSRDVKDIY 299
+ +GW ++ DV +++
Sbjct: 235 HVGPEGWTKLSGDDVGELH 253
>gi|337298923|ref|NP_001229673.1| proteasome subunit beta type-8 [Ornithorhynchus anatinus]
gi|156602028|gb|ABU86903.1| Psmb8 [Ornithorhynchus anatinus]
Length = 270
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 99 KVIEINPQLLGTMSGSAADCQYWERLLAKECRLYHLRNGERISVSAASKLLSNMMCQYRG 158
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G+ + G F GSG YA ++D+ Y
Sbjct: 159 --------MGLSMGSMICGWDKK-GPGLYYVDEDGVRLSGLMFSTGSGRNYAYGVMDSGY 209
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V DV D+ EA
Sbjct: 210 RYDLSPEEAYDLGRRAIVHATHRDGYSGGMVNMYHMKQDGWIKVEQTDVNDLLLSTLEA 268
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+++A DSRATA + I SQ +NK +
Sbjct: 63 LFKGTTTLAFNFQHGVVVAVDSRATAGNYICSQMVNKVIE 102
>gi|149732106|ref|XP_001496055.1| PREDICTED: proteasome subunit beta type-8-like isoform 1 [Equus
caballus]
Length = 276
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNSYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R +LS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RNNLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 274
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|255646634|gb|ACU23791.1| unknown [Glycine max]
Length = 272
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTVAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DLS EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 RYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELH 251
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|297844202|ref|XP_002889982.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
gi|297335824|gb|EFH66241.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 104 VYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
++ GG S++S + + ++I ++ +L T+AG AADC +W +L +C+ +
Sbjct: 64 IFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLH 123
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
E + +++ A+ LL NM+ YR GLS GT++A +DE GP LY +DN
Sbjct: 124 ELANKRRISVSGASKLLANMLYSYRG--------MGLSVGTMIAGWDET-GPGLYYVDNE 174
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G ++G +F VGSG+ YA +LD+ Y+ D+S EEA LA +IYHA RD SGG +Y
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234
Query: 281 KINGQGWQQVLSRDVKDIY 299
+ +GW ++ DV +++
Sbjct: 235 HVGPEGWTKLSGDDVGELH 253
>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
Length = 260
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 89 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMYQYRG 148
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 149 --------MGLSMGSMICGWDK-KGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGH 199
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 200 RYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 258
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 56 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 92
>gi|390355470|ref|XP_792356.3| PREDICTED: proteasome subunit beta type-5-like [Strongylocentrotus
purpuratus]
Length = 187
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 12/181 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL NM+ Y+
Sbjct: 16 KVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKERISVAAASKLLANMLYNYK- 74
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + F VGSG+ YA +LD Y
Sbjct: 75 -------GMGLSVGTMICGWDK-RGPGLYYVDSDGNRLTNNIFSVGSGSPYAYGVLDEGY 126
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI---YNDRK 303
+ +LS E+A L AIYHA RD +SGG V LY + GW ++ S DVKD+ Y D K
Sbjct: 127 KWELSVEDALDLGQRAIYHATHRDAYSGGVVNLYHMQETGWVKISSTDVKDLHYRYQDEK 186
Query: 304 E 304
+
Sbjct: 187 K 187
>gi|367020222|ref|XP_003659396.1| hypothetical protein MYCTH_2296370 [Myceliophthora thermophila ATCC
42464]
gi|347006663|gb|AEO54151.1| hypothetical protein MYCTH_2296370 [Myceliophthora thermophila ATCC
42464]
Length = 283
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 130/265 (49%), Gaps = 33/265 (12%)
Query: 64 SYSQRSHCVAETQQD--------HFLSPPLSQSSQHII------SGDSCEL--------L 101
SY Q E QQD F PP++ S + S SC + L
Sbjct: 12 SYHQNETFTEEEQQDLTDTVPSLKFAMPPVAHPSAWLRAVTDDRSNPSCPIKIAHGTTTL 71
Query: 102 HPVYTGGERCGPFSQS---STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECK 158
+ GG S++ S + T +VI ++S +L T+AG AADC YWL L +C+
Sbjct: 72 AFRFQGGIIVATDSRATAGSWIASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCR 131
Query: 159 GYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLD 218
+E +++ +++ A+ +L N+V +Y+ GLS GT+ A + GP LY +D
Sbjct: 132 LHELRHKRRISVAAASKILANLVYQYK--------GMGLSMGTMCAGVTKEEGPALYYID 183
Query: 219 NTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVR 278
+ G + G FCVGSG +A +LD +YR DL+ EEA L + +I A RD +SGG +
Sbjct: 184 SDGTRLAGDLFCVGSGQTFAYGVLDAEYRWDLTTEEALELGSRSILAATHRDAYSGGFIN 243
Query: 279 LYKINGQGWQQVLSRDVKDIYNDRK 303
LY + GW++ D ++ K
Sbjct: 244 LYHVKESGWEKHGFTDTNPVFWKTK 268
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGSWIASQTVKKVIE 103
>gi|351703555|gb|EHB06474.1| Proteasome subunit beta type-8, partial [Heterocephalus glaber]
Length = 227
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 12/196 (6%)
Query: 110 RCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMT 169
R S STV N +VI ++ +L T++G AADC YW LAKEC+ Y + ++
Sbjct: 42 RATAGSYISTVGIN---KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERIS 98
Query: 170 IRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF 229
+ A+ LL NMV +YR GLS G+++ +D+ GP LY ++ G + G F
Sbjct: 99 VSAASKLLANMVSQYRG--------LGLSMGSMICGWDK-KGPGLYYVNEEGTRLSGHLF 149
Query: 230 CVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
GSG YA +LD+ +RPDLS EEAY L A+ +A RD +SGG V +Y + GW +
Sbjct: 150 STGSGNTYAYGVLDSGHRPDLSPEEAYDLGRRAVVYATHRDSYSGGVVNMYHMKEDGWVK 209
Query: 290 VLSRDVKDIYNDRKEA 305
V S DV D+ +EA
Sbjct: 210 VESTDVSDLLYQYQEA 225
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I + +NK +
Sbjct: 23 GTTTLAFKFQHGVIVAVDSRATAGSYISTVGINKVIE 59
>gi|50423687|ref|XP_460428.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
gi|49656097|emb|CAG88735.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
Length = 282
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 8/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q + + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+
Sbjct: 91 TQGNWIASQTVNKVIRINPDLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG
Sbjct: 151 KILSNLVYEYK--------GMGLSMGTMICGYTKKEGPTIYYVDSDGSRLKGEMFCVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +LD++YR DLS EEA L +I A RD +SGG V LY + GW + +
Sbjct: 203 QTFAYGVLDSEYRWDLSVEEALYLGKRSILAATHRDAYSGGSVNLYHVTEAGWVYHGNHN 262
Query: 295 VKDIYNDRKE 304
V DI+ D KE
Sbjct: 263 VGDIFWDIKE 272
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT+ FR+ GI++A DSRAT + I SQ +NK +
Sbjct: 70 GTTTMAFRFQGGIVVAVDSRATQGNWIASQTVNKVIR 106
>gi|972986|gb|AAA75035.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|972988|gb|AAA75036.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|15489383|gb|AAH13785.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ +EA
Sbjct: 216 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYREA 274
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|90076164|dbj|BAE87762.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AAD +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADRSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y DL E+AY LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 196 GVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 255
Query: 300 NDRKEAPP 307
+ P
Sbjct: 256 EKYSGSTP 263
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|227937349|gb|ACP43315.1| 20S proteasome beta subunit 5 [Citrus maxima]
Length = 272
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 251
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|146332395|gb|ABQ22703.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 164
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 9/173 (5%)
Query: 135 ILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIP 194
+L T+AG AADC +W LA++C+ YE + + +++ A+ LL NMV +Y+
Sbjct: 1 LLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK--------G 52
Query: 195 NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEE 254
GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA ++D Y DL EE
Sbjct: 53 MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEE 111
Query: 255 AYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
AY LA AIY A RD +SGG V LY + GW +V S +V D++ + P
Sbjct: 112 AYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 164
>gi|323450997|gb|EGB06876.1| hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens]
Length = 287
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + + +++
Sbjct: 90 GPYIASQTVK-----KVIEINPFLLGTMAGGAADCSFWERNLGTQCRMFELRNKRRVSVA 144
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N + YR GLS GT++ +DE GPQLY +D+ G + G FCV
Sbjct: 145 AASKMLANTMYSYRG--------RGLSMGTMVCGWDET-GPQLYYVDDDGTRLHGNVFCV 195
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA ++D++ R DL+ EA L AI A RD +SGG LY + GW+ +
Sbjct: 196 GSGSTYAYGVIDSNLRDDLTVPEAIDLGRRAIAGAAHRDAYSGGWNNLYHMKETGWEFIG 255
Query: 292 SRDVKDIYNDRKEAPPGGG 310
+ D D+Y GGG
Sbjct: 256 AVDTNDLYYHYIHKGEGGG 274
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I++ DSR+T I SQ + K +
Sbjct: 64 FAKGTTTLAFKFNGGVIISVDSRSTMGPYIASQTVKKVIE 103
>gi|224110734|ref|XP_002315619.1| predicted protein [Populus trichocarpa]
gi|222864659|gb|EEF01790.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 91 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILFSYRG 150
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA ILD+ Y
Sbjct: 151 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGILDSGY 201
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D+S EEA L AIYHA RD SGG +Y + GW ++ DV +++
Sbjct: 202 RFDMSIEEAAELGRRAIYHATFRDGASGGVASVYYVGANGWTKLSGDDVSELH 254
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+I+A DSRA+ I SQ + K +
Sbjct: 58 GTTTLAFIFKEGVIVAADSRASMGGYISSQSVKKIIE 94
>gi|145520279|ref|XP_001445995.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413472|emb|CAK78598.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 110/203 (54%), Gaps = 17/203 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V +VI ++ +L T+AG AADC YWL LA C+ YE K + +++
Sbjct: 41 GSFLSSEQVR-----KVIEINEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVA 95
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L ++ YR +GLS G ++A D G LY +DN G+ ++G F V
Sbjct: 96 AASKFLQGILIGYRN--------SGLSMGCMIAGTDTT-GQHLYYIDNDGMRLKGDIFSV 146
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD YR DLS EA L AIYHA RD SGG VR+Y I+ GW +V
Sbjct: 147 GSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHRDTASGGVVRVYHIHKDGWTKVH 206
Query: 292 SR-DVKDIYND--RKEAPPGGGD 311
DV D++ +++ G GD
Sbjct: 207 DGIDVVDLHYKFAQQKGLVGDGD 229
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 1 MFITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+F GTTTLGF + EGI+LA DSRA+ + S+++ K +
Sbjct: 14 IFKHGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIE 54
>gi|224102305|ref|XP_002312631.1| predicted protein [Populus trichocarpa]
gi|222852451|gb|EEE89998.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 89 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 148
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA ILD+ Y
Sbjct: 149 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGILDSGY 199
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI-YN 300
R D+S EEA L AIYHA RD SGG +Y + GW+++ DV ++ YN
Sbjct: 200 RFDMSIEEAAELGRRAIYHATFRDGASGGVASVYYVGPDGWKKLSGDDVSELHYN 254
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + +G+I+A DSRA+ I SQ + K +
Sbjct: 56 GTTTLAFIFKDGVIVAADSRASMGGYISSQSVKKIIE 92
>gi|116790903|gb|ABK25785.1| unknown [Picea sitchensis]
Length = 271
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPHLLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSIGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D+ EEA LA +IYHA RD SGG +Y + QGW+++ DV +++
Sbjct: 199 RWDMPVEEAAELARRSIYHATFRDGASGGVASVYYVGPQGWKKLSGDDVGELH 251
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EGI++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGIMVAADSRASMGGYISSQSVKKIIE 91
>gi|426352663|ref|XP_004043829.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Gorilla
gorilla gorilla]
Length = 276
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +E
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREG 274
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 108
>gi|146332701|gb|ABQ22856.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
jacchus]
Length = 168
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL NMV +Y+
Sbjct: 1 INPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK----- 55
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA ++D Y DL
Sbjct: 56 ---GMGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDL 111
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
EEAY LA AIY A RD +SGG V LY + GW +V S +V D++ + P
Sbjct: 112 EVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 168
>gi|145484105|ref|XP_001428075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395158|emb|CAK60677.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 9/164 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC YWL LA C+ YE K + +++ A+ L ++ YR
Sbjct: 90 KVIEINEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRN 149
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+GLS G ++A D G LY +DN G+ ++G F VGSG+ YA +LD Y
Sbjct: 150 --------SGLSMGCMIAGTDTT-GQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHY 200
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
R DLS EA L AIYHA RD SGG VR+Y I+ GW +V
Sbjct: 201 RYDLSLNEAVELGIRAIYHATHRDTASGGVVRVYHIHKDGWTKV 244
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + EGI+LA DSRA+ + S+++ K +
Sbjct: 54 FKHGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIE 93
>gi|395859279|ref|XP_003801967.1| PREDICTED: proteasome subunit beta type-5 [Otolemur garnettii]
Length = 263
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D Y L E+AY LA AIY A RD +SGG V LY + GW +V S +V +++
Sbjct: 196 GVMDRGYSYHLEVEQAYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVAELH 255
Query: 300 NDRKEAPP 307
+ + P
Sbjct: 256 DKYRGLTP 263
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|195333237|ref|XP_002033298.1| GM21240 [Drosophila sechellia]
gi|194125268|gb|EDW47311.1| GM21240 [Drosophila sechellia]
Length = 282
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
DL +EEA L AIYHA RD +SGG +R+Y I GW + + D +++ +E
Sbjct: 217 HWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYKYQE 274
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|315039657|ref|XP_003169204.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
gi|311337625|gb|EFQ96827.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
Length = 283
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYNYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA AL + +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIF 264
Query: 300 NDRK 303
+ K
Sbjct: 265 WNTK 268
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|195582278|ref|XP_002080955.1| GD10758 [Drosophila simulans]
gi|194192964|gb|EDX06540.1| GD10758 [Drosophila simulans]
Length = 282
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
DL +EEA L AIYHA RD +SGG +R+Y I GW + + D +++ +E
Sbjct: 217 HWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYKYQE 274
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|195382663|ref|XP_002050049.1| GJ21921 [Drosophila virilis]
gi|194144846|gb|EDW61242.1| GJ21921 [Drosophila virilis]
Length = 279
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 18/199 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGG+ G SQS +++ ++ +L TLAG AADCVYW LAKEC+ +E + +
Sbjct: 94 TGGQYIG--SQSMK-------KIVEINQFLLGTLAGGAADCVYWDRVLAKECRLHELRNK 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ ++ N+ +Y+ GLS G ++A YD+ GP LY +D+ G
Sbjct: 145 ERISVAAASKIMANIAHEYKG--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTP 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G F VGSG+ YA +LD+ Y DL + EA L AIYHA RD +SGG VR+Y +
Sbjct: 196 GNVFSVGSGSIYAFGVLDSGYHWDLKDTEAQELGRRAIYHATFRDAYSGGIVRVYHMTPN 255
Query: 286 GWQQVLSRDVKDIYNDRKE 304
GW ++ D +++ KE
Sbjct: 256 GWIKISETDCMELHYKYKE 274
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYQGGVILAVDSRATGGQYIGSQSMKKIVE 109
>gi|403213903|emb|CCK68405.1| hypothetical protein KNAG_0A07520 [Kazachstania naganishii CBS
8797]
Length = 287
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ YE K + +T+ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLYELKEKQRITVAAASKILAN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDVFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+Y+ DLS E+A L AI A RD +SGG + LY + QGW + DV +
Sbjct: 213 GVLDTNYKWDLSVEDALYLGKRAILAATHRDAYSGGSINLYHVTEQGWVFHGNHDVGATF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|302660177|ref|XP_003021770.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
gi|291185685|gb|EFE41152.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
Length = 281
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 91 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 150
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 151 LVYNYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAY 202
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA AL + +I A RD +SGG + LY + GW + D I+
Sbjct: 203 GVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIF 262
Query: 300 NDRK 303
+ K
Sbjct: 263 WNTK 266
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 65 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 101
>gi|327302090|ref|XP_003235737.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326461079|gb|EGD86532.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 283
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYNYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA AL + +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIF 264
Query: 300 NDRK 303
+ K
Sbjct: 265 WNTK 268
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|302503731|ref|XP_003013825.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|291177391|gb|EFE33185.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|326474427|gb|EGD98436.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326481493|gb|EGE05503.1| proteasome component PRE2 [Trichophyton equinum CBS 127.97]
Length = 283
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYNYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLPGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA AL + +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIF 264
Query: 300 NDRK 303
+ K
Sbjct: 265 WNTK 268
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|194884165|ref|XP_001976166.1| GG20151 [Drosophila erecta]
gi|190659353|gb|EDV56566.1| GG20151 [Drosophila erecta]
Length = 282
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
DL +EEA L AIYHA RD +SGG +R+Y I GW + + D +++
Sbjct: 217 HWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|395728687|ref|XP_002809171.2| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pongo abelii]
Length = 272
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 270
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 104
>gi|361131074|gb|EHL02796.1| putative proteasome component PRE2 [Glarea lozoyensis 74030]
Length = 283
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ YE ++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLYELRHHRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------RGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNMFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y DLSEEEA AL + +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDAEYSYDLSEEEALALGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|116791186|gb|ABK25888.1| unknown [Picea sitchensis]
Length = 271
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYLLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D+ EEA LA +IYHA RD SGG +Y + QGW+++ DV +++
Sbjct: 199 RWDMPVEEAAELARRSIYHATFRDGASGGVASVYYVGPQGWKKLSGDDVAELH 251
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EGI++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGIMVAADSRASMGGYISSQSVKKIIE 91
>gi|449452891|ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
gi|449529978|ref|XP_004171974.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
Length = 272
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ ++ + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHKLANKRRISVAGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAP 306
R DLS EEA LA AIYHA RD SGG +Y + GW+++ DV +++ +
Sbjct: 199 RYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVT 258
Query: 307 P 307
P
Sbjct: 259 P 259
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|388515987|gb|AFK46055.1| unknown [Lotus japonicus]
Length = 270
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ +L N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKMLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 KYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVGELH 251
>gi|344232781|gb|EGV64654.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 280
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 8/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
SQ + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+
Sbjct: 89 SQGNFTASQTVHKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N+V Y+ GLS GT++ Y + GP L+ +D+ G ++G FCVGSG
Sbjct: 149 KLLGNLVYNYKG--------MGLSMGTMICGYTQKEGPALFYVDSDGTRLKGDMFCVGSG 200
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +LD++Y+ D+ EEEA L +I A RD +SGG V LY I+ GW+ + D
Sbjct: 201 QTFAYGVLDSEYKWDMPEEEALYLGKRSILAAAHRDAYSGGSVNLYHIDINGWKYHGNFD 260
Query: 295 VKDIYNDRKE 304
V +++ + KE
Sbjct: 261 VGELFWEVKE 270
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY GI++A DSRA+ + SQ ++K +
Sbjct: 68 GTTTLAFRYKGGIVIAVDSRASQGNFTASQTVHKVIR 104
>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit [Babesia bovis T2Bo]
gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
Length = 268
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + +VI ++S +L T+AG AADC YW +AK C+ +E + + +T+ HA+
Sbjct: 77 SMGSIIATQNISKVIEINSYLLGTMAGGAADCTYWERHVAKLCRLHELRNQERITVAHAS 136
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ +R GLS GT++A +D+ GP+L+ + + G + G F VGSG
Sbjct: 137 QILANIFFYFR--------GYGLSAGTMIAGWDKNKGPELFYVSDKGERVSGKLFSVGSG 188
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A ++D YR D++ +EA L AIY A RD +SGG V LY ++ GW +++ D
Sbjct: 189 SLFAYGVIDQHYRSDMTLDEAVELGKRAIYQAAHRDAYSGGYVNLYHVHENGWTKIV--D 246
Query: 295 VKDI 298
+DI
Sbjct: 247 YQDI 250
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + +G+ILA DSRA+ +I +Q ++K +
Sbjct: 53 FKKGTTTLGFVFNKGVILAVDSRASMGSIIATQNISKVIE 92
>gi|395728689|ref|XP_002809170.2| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pongo abelii]
Length = 276
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 216 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 274
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|52548240|gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum]
Length = 279
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I ++
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHELANKRRISIAGSS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N++ YR GLS GT++A +DE GP LY +D+ G ++G++F VGSG
Sbjct: 141 KTLANILYSYRG--------MGLSIGTMIAGFDET-GPGLYYVDSEGARLKGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD Y+ ++S EEA LA AIYHA RD SGGCV +Y + GW+++ D
Sbjct: 192 SLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|440638272|gb|ELR08191.1| 20S proteasome subunit beta 5 [Geomyces destructans 20631-21]
Length = 285
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++S+L T+AG AADC YWL L +C+ +E + + +T+ A+ +L N
Sbjct: 96 IASQTVKKVIEINNSLLGTMAGGAADCQYWLAYLGMQCRLHELRQKRRITVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 156 IVYSYKG--------MGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DLSEEEA L +I A RD +SGG + LY + +GW + D I+
Sbjct: 208 GVLDAEYRYDLSEEEALELGRRSILAATHRDAYSGGYINLYHVKEEGWVKHGFNDTNPIF 267
Query: 300 NDRK 303
K
Sbjct: 268 WKTK 271
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|301624547|ref|XP_002941560.1| PREDICTED: proteasome subunit beta type-5 [Xenopus (Silurana)
tropicalis]
Length = 257
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 14/190 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
G + S TV +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 75 AGAYIASQTVK-----KVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISV 129
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G+ F
Sbjct: 130 AAASKLLANMVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRVSGSVFS 180
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA +LD Y ++ EEA LA +IY A RD +SGG V LY + GW +V
Sbjct: 181 VGSGSMYAYGVLDRGYNYEMEVEEAQELARRSIYQATYRDAYSGGVVNLYHVREDGWVRV 240
Query: 291 LSRDVKDIYN 300
DV D++
Sbjct: 241 SQDDVADLHQ 250
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 50 FLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIE 89
>gi|225708502|gb|ACO10097.1| Proteasome subunit beta type 8 precursor [Osmerus mordax]
Length = 275
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 92 SAGSYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM++ YR GLS G+++ +D GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMQGYR--------GMGLSMGSMIIGWDN-KGPGLYYVDDNGTRLSGRTFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ Y+ D++ EEAY L I HA RD +SGG V LY + GW +V D
Sbjct: 203 SSYAYGVVDSGYQEDMTVEEAYELGRRGIVHATHRDAYSGGVVNLYHMQEDGWIKVCKED 262
Query: 295 VKDI 298
V ++
Sbjct: 263 VSEL 266
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S++ NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGSYIASKEANKVIE 107
>gi|145548529|ref|XP_001459945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427772|emb|CAK92548.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 17/203 (8%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V +VI ++ +L T+AG AADC YWL LA C+ YE K + +++
Sbjct: 35 GSFLSSEQVR-----KVIEINEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVA 89
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L ++ Y+ +GLS G ++A D + G LY +DN G+ ++G F V
Sbjct: 90 AASKFLQGILIGYKN--------SGLSMGCMIAGTD-LSGQHLYYIDNDGMRLKGDIFSV 140
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD YR DLS EA L AIYHA RD SGG VR+Y I+ GW +V
Sbjct: 141 GSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHRDTASGGVVRVYHIHQNGWTKVH 200
Query: 292 SR-DVKDIYND--RKEAPPGGGD 311
DV D++ +++ G GD
Sbjct: 201 DGIDVVDLHYKFAQQKGLVGDGD 223
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + EGI+LA DSRA+ + S+++ K +
Sbjct: 9 FKHGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIE 48
>gi|972990|gb|AAA75037.1| 20S proteasome subunit Lmp7 [Mus musculus]
Length = 276
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ EA
Sbjct: 216 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGEA 274
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|56753153|gb|AAW24786.1| SJCHGC05978 protein [Schistosoma japonicum]
gi|226471270|emb|CAX70716.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488126|emb|CAX75728.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488128|emb|CAX75729.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488130|emb|CAX75730.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 105 YTGGERCGPFSQS---STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y+GG S++ S + T+ ++I ++ +L T+AG AADC +W LAK C+ +E
Sbjct: 70 YSGGVIVATDSRATAGSYIASGTTKKIIEINKYLLGTMAGGAADCQFWERVLAKHCRLFE 129
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +++ A+ LL NMV Y+ GLS GT + +D+ GP +Y +D G
Sbjct: 130 LRNKERISVAAASKLLANMVYNYK--------GMGLSIGTTIVGWDKN-GPGVYYVDTDG 180
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
G F VGSG+ YA +LD Y+ ++S+E+AY LA +I+HA RD SGG V LY
Sbjct: 181 NRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAASGGFVNLYH 240
Query: 282 INGQGWQQVLSRDVKDIY 299
+ GW+ + DV ++Y
Sbjct: 241 MKEDGWKFIGIFDVGELY 258
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F+Y G+I+ATDSRATA I S K +
Sbjct: 59 FLHGTTTLAFKYSGGVIVATDSRATAGSYIASGTTKKIIE 98
>gi|225425821|ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
gi|297738390|emb|CBI27591.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 88 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD Y
Sbjct: 148 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D+S EEA LA +IYHA RD SGG +Y + GW+++ DV +++
Sbjct: 199 RYDMSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELH 251
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 91
>gi|158303322|ref|NP_034854.2| proteasome subunit beta type-8 precursor [Mus musculus]
gi|1172603|sp|P28063.2|PSB8_MOUSE RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
molecular mass protein 7; AltName: Full=Macropain
subunit C13; AltName: Full=Multicatalytic endopeptidase
complex subunit C13; AltName: Full=Proteasome component
C13; AltName: Full=Proteasome subunit beta-5i; Flags:
Precursor
gi|494969|gb|AAB46392.1| proteasome subunit [Mus musculus]
gi|582390|emb|CAA45779.1| proteasome subunit MC13 [Mus musculus]
gi|972982|gb|AAA75033.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|972984|gb|AAA75034.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|2555193|gb|AAB81532.1| 20S proteosome subunit lmp7 [Mus musculus]
gi|26327623|dbj|BAC27555.1| unnamed protein product [Mus musculus]
gi|74177914|dbj|BAE29756.1| unnamed protein product [Mus musculus]
gi|74193489|dbj|BAE20682.1| unnamed protein product [Mus musculus]
gi|74213418|dbj|BAE35524.1| unnamed protein product [Mus musculus]
gi|148678314|gb|EDL10261.1| proteosome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ EA
Sbjct: 216 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGEA 274
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|227937351|gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]
Length = 194
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 10 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 69
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y
Sbjct: 70 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 120
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 121 KFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELH 173
>gi|406867649|gb|EKD20687.1| proteasome A-type and B-type [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 282
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA +L + +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYRYDLTEEEALSLGSRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 264
Query: 300 NDRK 303
K
Sbjct: 265 WKTK 268
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|326524101|dbj|BAJ97061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I ++
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHELANKRRISIAGSS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N++ YR GLS GT++A +DE GP LY +D+ G ++G++F VGSG
Sbjct: 141 KTLANILYSYRG--------MGLSIGTMIAGFDET-GPGLYYVDSEGARLKGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD Y+ ++S EEA LA AIYHA RD SGGCV +Y + GW+++ D
Sbjct: 192 SLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|225719232|gb|ACO15462.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
gi|225719406|gb|ACO15549.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
Length = 270
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I VS +L T+AG AADC+YW LA +C+ YE + +++ A+ LL N +Y+
Sbjct: 94 KIIEVSDYLLATMAGGAADCMYWDRVLATDCRLYELRNHCRISVAAASKLLANNAYRYKG 153
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD DY
Sbjct: 154 --------MGLSMGAMIAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSVYAYGVLDADY 204
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DL++EEAY L AI HA RD SGG VR+ + +G + + D K+++
Sbjct: 205 RYDLTDEEAYELGRRAIAHATYRDAASGGIVRVMHVTKEGKKMISEEDCKELH 257
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTLGF+Y G ILA DSRAT+ I S + K + S
Sbjct: 61 GTTTLGFKYEGGTILAVDSRATSGGYIGSGSVRKIIEVS 99
>gi|410928728|ref|XP_003977752.1| PREDICTED: proteasome subunit beta type-5-like [Takifugu rubripes]
Length = 271
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 92 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL 151
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 152 ANMVYQYKG--------MGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMY 202
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D+ R DL+ EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 203 AYGVMDSGLRHDLTVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQDDVLM 262
Query: 298 IYNDRKE 304
++ KE
Sbjct: 263 LHQRYKE 269
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 65 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 104
>gi|258574735|ref|XP_002541549.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
gi|237901815|gb|EEP76216.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
Length = 283
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L C+ +E +++ +++ A+ LL N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA +L +I A RD +SGG V LY + +GW + D+ I+
Sbjct: 206 GVLDAEYRYDLTEEEALSLGRRSILAAMHRDAYSGGSVNLYHVKEEGWVKHGFSDMNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKEK 269
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|242094726|ref|XP_002437853.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
gi|241916076|gb|EER89220.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
Length = 280
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 82 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGNKCRLHELSNKRRISIAGAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G KF VGSG
Sbjct: 142 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLVGNKFSVGSG 192
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR ++S EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 193 SLYAYGVLDDGYRFNMSVEEAAELARRAIYGATFRDAASGGCVSVYHVGPDGWTKLSGDD 252
Query: 295 VKDIY 299
V +++
Sbjct: 253 VGELH 257
>gi|161611764|gb|AAI55951.1| LOC100127332 protein [Xenopus laevis]
Length = 253
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 9/181 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 75 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 134
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G+ F VGSG+ YA
Sbjct: 135 MVYQYK--------GMGLSMGTMICGWDK-RGPGLYYVDSEGNRVSGSVFSVGSGSMYAY 185
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD+ Y +L EEA LA +IY A RD +SGG V LY + GW +V DV +++
Sbjct: 186 GVLDSGYNYELEVEEAQELARRSIYQATYRDAYSGGVVNLYHVREDGWVRVSQDDVLELH 245
Query: 300 N 300
Sbjct: 246 Q 246
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 46 FLHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIE 85
>gi|195483626|ref|XP_002090364.1| Prosbeta5 [Drosophila yakuba]
gi|194176465|gb|EDW90076.1| Prosbeta5 [Drosophila yakuba]
Length = 282
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A +D+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGFDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
DL +EEA L AIYHA RD +SGG +R+Y I GW + + D +++
Sbjct: 217 HWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|125811046|ref|XP_001361733.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
gi|54636909|gb|EAL26312.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
Length = 279
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 12/189 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N
Sbjct: 99 IGSQTMKKIVEINDFLLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMAN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ +Y+ GLS G ++A YD+ GP LY +D+ G G F VGSG+ +A
Sbjct: 159 IAHEYKG--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLFAY 209
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI- 298
+LD+ YR DL ++EA L AIYHA RD +SGG +R+Y + GW V + D ++
Sbjct: 210 GVLDSGYRWDLQDKEAQDLGQRAIYHATFRDAYSGGIIRVYHMTPTGWINVSNTDCMELH 269
Query: 299 --YNDRKEA 305
+ KEA
Sbjct: 270 YKFKSEKEA 278
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVE 109
>gi|74222319|dbj|BAE26960.1| unnamed protein product [Mus musculus]
Length = 276
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISMSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ EA
Sbjct: 216 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGEA 274
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|384245501|gb|EIE18995.1| 20S proteasome beta subunit E, type beta 5 [Coccomyxa
subellipsoidea C-169]
Length = 276
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 9/192 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T+AG AADC +W +L ++C+ YE +++R A+
Sbjct: 80 SMGSYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNLGQQCRLYELNNGKRISVRAAS 139
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ Y+ GLS GT++A YD GP LY +D+ G +G F VGSG
Sbjct: 140 KLLANVMFSYKG--------YGLSMGTMVAGYDPT-GPGLYYVDSDGQRTKGQIFSVGSG 190
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD Y+ D+ E+A L +IYHA RD SGG V +Y + GW++V D
Sbjct: 191 SLYAYGVLDNGYKWDMDVEDAIELGRRSIYHATFRDAVSGGTVSVYHVTADGWKKVRGDD 250
Query: 295 VKDIYNDRKEAP 306
V +++ + P
Sbjct: 251 VGELHYEYYPTP 262
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 20/66 (30%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNK--------------------FCQSSL 44
GTTTLGF + G+I+A DSRA+ I SQ + K F Q +L
Sbjct: 59 GTTTLGFIFKYGVIIAVDSRASMGSYISSQTVKKVIEINPYLLGTMAGGAADCQFWQRNL 118
Query: 45 GDSCEL 50
G C L
Sbjct: 119 GQQCRL 124
>gi|171687907|ref|XP_001908894.1| hypothetical protein [Podospora anserina S mat+]
gi|170943915|emb|CAP69567.1| unnamed protein product [Podospora anserina S mat+]
Length = 288
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 156 LVYQYK--------GKGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+ EEA L + +I A RD +SGG + LY + GW++ D ++
Sbjct: 208 GVLDAEYRYDLTVEEALELGSRSILAATHRDAYSGGFINLYHVKESGWEKHGFTDTNPVF 267
Query: 300 NDRK 303
K
Sbjct: 268 WKTK 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|295673490|ref|XP_002797291.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282663|gb|EEH38229.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA L +I A RD +SGG + LY I GW++ D I+
Sbjct: 206 GVLDAEYRYDLTEEEALELGRRSILAATHRDAYSGGFINLYHIKEAGWEKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|673450|emb|CAA45780.1| proteasome subunit MC13 [Mus musculus]
Length = 208
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 9/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 37 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYR- 95
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 96 -------GMGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 147
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAP 306
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ EA
Sbjct: 148 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGEAA 207
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 4 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 40
>gi|167521858|ref|XP_001745267.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776225|gb|EDQ89845.1| predicted protein [Monosiga brevicollis MX1]
Length = 247
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ +L T+AG AADC YW LA +C+ YE + +++ A+
Sbjct: 60 TAGSYIASQTVKKVIEINPYLLGTMAGGAADCSYWERYLAMQCRLYELRNGERISVAAAS 119
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V YR GLS GT++ +D+ GP L+ +D+ G + F VGSG
Sbjct: 120 KVLANIVWNYRN--------MGLSMGTMVCGWDK-KGPGLFYVDSDGTRLTNNMFSVGSG 170
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD Y+ DLS+EEA L AIYHA RD +SGG V LY + GW ++ +
Sbjct: 171 STYAYGVLDAGYKWDLSDEEAQDLGRRAIYHATFRDAYSGGTVNLYHMRQTGWVKISADS 230
Query: 295 VKDIY 299
V D++
Sbjct: 231 VHDLH 235
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y G+I+A DSRATA I SQ + K +
Sbjct: 39 GTTTLGFKYQGGVIIAVDSRATAGSYIASQTVKKVIE 75
>gi|225557527|gb|EEH05813.1| proteasome component PRE2 [Ajellomyces capsulatus G186AR]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L + +I A RD +SGG + LY + +GW++ D I+
Sbjct: 206 GVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGYINLYHVKEEGWKKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|225681120|gb|EEH19404.1| proteasome subunit beta type-5 [Paracoccidioides brasiliensis Pb03]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA L +I A RD +SGG + LY I GW++ D I+
Sbjct: 206 GVLDAEYRYDLTEEEALELGRRSILAATHRDAYSGGFINLYHIKEAGWEKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|226292176|gb|EEH47596.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb18]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA L +I A RD +SGG + LY I GW++ D I+
Sbjct: 206 GVLDAEYRYDLTEEEALELGRRSILAATHRDAYSGGFINLYHIKEAGWEKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|378792425|pdb|3UNF|K Chain K, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792439|pdb|3UNF|Y Chain Y, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792453|pdb|3UNH|K Chain K, Mouse 20s Immunoproteasome
gi|378792467|pdb|3UNH|Y Chain Y, Mouse 20s Immunoproteasome
Length = 204
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 9/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 33 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYR- 91
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 92 -------GMGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 143
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAP 306
R DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ EA
Sbjct: 144 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGEAA 203
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 6 TTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 1 TTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 36
>gi|336464534|gb|EGO52774.1| proteasome component PRE2 precursor [Neurospora tetrasperma FGSC
2508]
gi|350296625|gb|EGZ77602.1| proteasome component PRE2 precursor [Neurospora tetrasperma FGSC
2509]
Length = 291
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+ EEA L + +I A RD +SGG + LY + GW++ D I+
Sbjct: 207 GVLDAEYRYDLTVEEALELGSRSILAATHRDAYSGGFINLYHVKESGWEKHGFNDTNPIF 266
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIVVATDSRATAGNWIASQTVKKVIE 105
>gi|59275968|dbj|BAD89554.1| proteasome subunit [Oncorhynchus mykiss]
Length = 267
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 84 SAGSYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAAS 143
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D GP LY +D+ + G F G G
Sbjct: 144 KLLCNMMLGYR--------GMGLSMGSMIVGWDN-KGPGLYYVDDNATRLSGRMFSTGCG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I HA RD +SGG V LY + GW +V D
Sbjct: 195 SSYAYGVMDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKED 254
Query: 295 VKDI 298
V ++
Sbjct: 255 VSEL 258
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S++ NK +
Sbjct: 63 GTTTLAFKFRHGVIVAVDSRASAGSYIASKEANKVIE 99
>gi|289740977|gb|ADD19236.1| 20S proteasome regulatory subunit beta type PSMB5/PSMB8/PRE2
[Glossina morsitans morsitans]
Length = 279
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ +E + + +++ A+ ++ N+ +
Sbjct: 102 TMKKIVEINQYMLGTLAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIMANIAHE 161
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GLS G ++A YD+ GP LY +D+ G F VGSG+ YA +LD
Sbjct: 162 YKG--------MGLSMGMMLAGYDK-RGPGLYYVDSDASRSPGNVFSVGSGSVYAFGVLD 212
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ YR DL ++EA L AIY+A RD +SGG VR+Y + GW V + D D++
Sbjct: 213 SGYRWDLKDDEAQELGRRAIYNATFRDAYSGGIVRVYHMTADGWVNVSNTDCMDLH 268
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 69 FDHGTTTLGFKYQGGVILAVDSRATGGQFIGSQTMKKIVE 108
>gi|255713154|ref|XP_002552859.1| KLTH0D03058p [Lachancea thermotolerans]
gi|238934239|emb|CAR22421.1| KLTH0D03058p [Lachancea thermotolerans CBS 6340]
Length = 287
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 8/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L TLAG AADC +W L +C+ +E K + +++ A+ +L
Sbjct: 99 SWIASQTVKKVIEINPFLLGTLAGGAADCQFWETWLGTQCRLHELKEKERISVAAASKIL 158
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +
Sbjct: 159 SNLVYQYKGA--------GLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDMFCVGSGQTF 210
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD++Y+ DLS EEA L +I A RD +SGG V LY + QGW +++++
Sbjct: 211 AYGVLDSNYKWDLSVEEALYLGKRSILAATHRDAYSGGSVNLYHVTEQGWVYHGNQNIET 270
Query: 298 IYNDRKE 304
++ + KE
Sbjct: 271 LFWEVKE 277
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA I SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGSWIASQTVKKVIE 111
>gi|240278169|gb|EER41676.1| proteasome component PRE2 [Ajellomyces capsulatus H143]
gi|325096234|gb|EGC49544.1| proteasome component [Ajellomyces capsulatus H88]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L + +I A RD +SGG + LY + +GW++ D I+
Sbjct: 206 GVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGYINLYHVKEEGWKKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|167540121|ref|XP_001741562.1| proteasome subunit beta type-5 precursor [Entamoeba dispar SAW760]
gi|165893870|gb|EDR21989.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
dispar SAW760]
Length = 252
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 113/190 (59%), Gaps = 14/190 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S +V + IP++S I+ T+AG AADC YW L ++C+ +E + + +++
Sbjct: 61 GAFISSGSVQ-----KYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVA 115
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +YR N LS G+++ YD+ GP ++ +++ G+ I G F V
Sbjct: 116 AASKMLANILYQYRNYN--------LSVGSMICGYDKT-GPHIFYVEDGGVRIPGHLFSV 166
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +++D++Y ++ +E+A LA AI+HA RD+ SGG V + I+ GW+ +
Sbjct: 167 GSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKDGWRLIS 226
Query: 292 SRDVKDIYND 301
D D+Y D
Sbjct: 227 RNDCYDLYYD 236
>gi|154274908|ref|XP_001538305.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
gi|150414745|gb|EDN10107.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L + +I A RD +SGG + LY + +GW++ D I+
Sbjct: 206 GVLDAEYRYDLTDEEALELGSRSILAATHRDAYSGGYINLYHVKEEGWKKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|67476394|ref|XP_653800.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470790|gb|EAL48414.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042489|gb|EKE41354.1| proteasome subunit beta type 5 precursor, putative [Entamoeba
nuttalli P19]
gi|449706891|gb|EMD46648.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 252
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 113/190 (59%), Gaps = 14/190 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S +V + IP++S I+ T+AG AADC YW L ++C+ +E + + +++
Sbjct: 61 GAFISSGSVQ-----KYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVA 115
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +YR N LS G+++ YD+ GP ++ +++ G+ I G F V
Sbjct: 116 AASKMLANILYQYRNYN--------LSVGSMICGYDKT-GPHIFYVEDGGVRIPGHLFSV 166
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +++D++Y ++ +E+A LA AI+HA RD+ SGG V + I+ GW+ +
Sbjct: 167 GSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKDGWRLIS 226
Query: 292 SRDVKDIYND 301
D D+Y D
Sbjct: 227 RNDCYDLYYD 236
>gi|85111469|ref|XP_963951.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
gi|28925704|gb|EAA34715.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
Length = 291
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+ EEA L + +I A RD +SGG + LY + GW++ D I+
Sbjct: 207 GVLDAEYRYDLTVEEALELGSRSILAATHRDAYSGGFINLYHVKESGWEKHGFNDTNPIF 266
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|158518464|ref|NP_001103512.1| proteasome beta 8 subunit [Xenopus (Silurana) tropicalis]
gi|157423123|gb|AAI53714.1| psmb8 protein [Xenopus (Silurana) tropicalis]
Length = 271
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
Query: 123 NTSF-QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMV 181
N F +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+ L+ NM+
Sbjct: 94 NVKFNKVIEINPYLLGTMSGSAADCQYWERVLAKECRLYQLRNNSRISVSAASKLMCNMM 153
Query: 182 RKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAI 241
+YR GLS G+++ +D+ GP LY +D+ G + G F GSG YA +
Sbjct: 154 LQYRG--------TGLSVGSMICGWDK-KGPGLYYVDDNGTRLCGDIFSTGSGNSYAYGV 204
Query: 242 LDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYND 301
+D+ YR DL+ EEAY L AI +A RD +SGG V LY + GW ++ DV D+ +
Sbjct: 205 MDSGYRYDLTPEEAYDLGRRAISYATHRDAYSGGFVNLYHMKEDGWVKIGQFDVNDLLHK 264
Query: 302 RKE 304
E
Sbjct: 265 YTE 267
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + K NK +
Sbjct: 66 GTTTLAFKFQHGVIVAVDSRASAGSYISNVKFNKVIE 102
>gi|440301472|gb|ELP93858.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
invadens IP1]
Length = 254
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 112/191 (58%), Gaps = 14/191 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S +V + IP++S I+ T+AG AADC YW L + C+ +E + R +++
Sbjct: 63 GAFISSQSVQ-----KYIPITSHIVGTMAGGAADCSYWERELTRRCRLFELRNRPPISVA 117
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ + N++ Y+ + LS G++++ +D+ GP +Y +++ G+ I G F V
Sbjct: 118 AASKIFANILYHYKNYD--------LSVGSMISGFDKT-GPHIYYVEDGGVRIPGNIFSV 168
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +++DT+Y ++ +E+A LA AI+HA RD+ SGG V + I+ GW+ +
Sbjct: 169 GSGSPFAVSVIDTEYDYNMGKEKAIELARRAIFHATHRDVASGGNVNVLFIDQNGWKLIS 228
Query: 292 SRDVKDIYNDR 302
D D+Y DR
Sbjct: 229 RNDCYDLYYDR 239
>gi|47228090|emb|CAF97719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 92 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL 151
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 152 ANMVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMY 202
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A ++D+ R DLS EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 203 AYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQDDV 260
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 65 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 104
>gi|340383914|ref|XP_003390461.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 197
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 14/191 (7%)
Query: 114 FSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHA 173
S S TV +VI ++ +L T+AG AADC YW L+ EC+ YE + + +++ A
Sbjct: 1 MSSSQTVK-----KVIEINPYLLGTMAGGAADCAYWERQLSFECRIYELRNKERISVAAA 55
Query: 174 ANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGS 233
+ LL NMV Y+ GLS GT++ +D+ GP +Y +D G F VGS
Sbjct: 56 SKLLANMVSYYK--------GYGLSMGTMICGWDK-KGPGIYYVDTDGNRFTNNIFSVGS 106
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
G+ YA ++D+ Y+ +S EEA L AIYHA RD +SGG V LY + GW +V
Sbjct: 107 GSTYAYGVIDSTYKWSMSIEEARELGKRAIYHATYRDSYSGGVVNLYHVQEDGWTKVSQT 166
Query: 294 DVKDIYNDRKE 304
DVK ++ +E
Sbjct: 167 DVKTLHYQYEE 177
>gi|428169158|gb|EKX38095.1| 20S proteasome subunit beta type 5 [Guillardia theta CCMP2712]
Length = 290
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 8/182 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T + I ++ +L T+AG AADC++W L + C+ YE + + +T A+
Sbjct: 97 SMGSYIGSQTVKKCIEITPYLLGTMAGGAADCMFWERHLGRLCRLYELRNKERITTAAAS 156
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ Y+ GLS GT++A +D+ +GP LY D+ G ++G KF VGSG
Sbjct: 157 KLLHNIMYSYKG--------YGLSMGTMIAGWDKDIGPNLYYCDSEGTRVKGQKFSVGSG 208
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD Y+ D+S ++A L AIYHA RD SGG V +Y ++ GW ++ D
Sbjct: 209 SPYAYGVLDEGYKFDMSIDDACELGRRAIYHATFRDAMSGGRVSVYHVHENGWTKISMDD 268
Query: 295 VK 296
V+
Sbjct: 269 VQ 270
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
F+ GTTTLGF + +GII+A DSRA+ I SQ + K
Sbjct: 73 FLHGTTTLGFVFSQGIIIAVDSRASMGSYIGSQTVKK 109
>gi|195134726|ref|XP_002011788.1| GI10892 [Drosophila mojavensis]
gi|193906911|gb|EDW05778.1| GI10892 [Drosophila mojavensis]
Length = 322
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG S++S + + +V+ V IL T+AG AADCVYW L EC+ +E
Sbjct: 81 YKGGIILAADSRASNGNFIASQSMRKVVQVHKKILGTIAGGAADCVYWDRVLTMECRLHE 140
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
Y ++++ A +L N+ K R GLS G ++A YD GP+L +D G
Sbjct: 141 LTYHRPLSVKSVARILSNIAYKLRG--------LGLSMGMMLAGYD-FDGPRLVYVDGDG 191
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+EG F VGSG +A ILD+ Y+ D+ +EEAY LA +IYHA D ++GG VRLY
Sbjct: 192 SSVEGHLFSVGSGCCFALGILDSYYKYDMEDEEAYCLAMRSIYHATYLDSYTGGLVRLYH 251
Query: 282 INGQGWQQVLSRDVKDI 298
+ W+ V +D D+
Sbjct: 252 MRENDWETVTVKDCADL 268
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF+Y GIILA DSRA+ + I SQ + K Q
Sbjct: 73 GTTTLGFKYKGGIILAADSRASNGNFIASQSMRKVVQ 109
>gi|146147386|gb|ABQ01989.1| proteasome subunit beta type 8 [Salmo salar]
gi|148362158|gb|ABQ59680.1| PSMB8a [Salmo salar]
Length = 267
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 84 SAGSYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAAS 143
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D GP LY +D+ + G F G G
Sbjct: 144 KLLCNMMLGYR--------GMGLSMGSMIVGWDN-KGPGLYYVDDNATRLSGRMFSTGCG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I HA RD +SGG V LY + GW +V D
Sbjct: 195 SSYAYGVIDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKED 254
Query: 295 VKDI 298
V ++
Sbjct: 255 VSEL 258
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+A DSRA+A I S++ NK +
Sbjct: 63 GTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIE 99
>gi|71747590|ref|XP_822850.1| proteasome subunit beta 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|10185394|emb|CAC08538.1| proteasome PRCE (beta-5) subunit precursor [Trypanosoma brucei]
gi|70832518|gb|EAN78022.1| proteasome beta 5 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332661|emb|CBH15656.1| proteasome beta 5 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 310
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 127 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 186
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ +YR NH GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 187 KILANITYQYR--NH------GLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHEIFSVGSG 237
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ +GW Q+ D
Sbjct: 238 SIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKGWTQISRDD 297
Query: 295 VKDIYN 300
+Y+
Sbjct: 298 QTKLYD 303
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GII+A DSRA++ I SQ + K +
Sbjct: 106 GTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLE 142
>gi|21355573|ref|NP_652014.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
gi|24652553|ref|NP_724974.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
gi|7303698|gb|AAF58748.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
gi|17862098|gb|AAL39526.1| LD08717p [Drosophila melanogaster]
gi|21627516|gb|AAM68751.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
gi|220942740|gb|ACL83913.1| Prosbeta5-PA [synthetic construct]
gi|220952918|gb|ACL89002.1| Prosbeta5-PA [synthetic construct]
Length = 282
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
DL ++EA L AIYHA RD +SGG +R+Y I GW + + D +++
Sbjct: 217 HWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|303283522|ref|XP_003061052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457403|gb|EEH54702.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 286
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 14/196 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + +++
Sbjct: 82 GPYISSQTVK-----KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVS 136
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + YR GLS GT++A +D + GP LY +D+ G ++G +F V
Sbjct: 137 GASKLLSNTLYGYRG--------QGLSMGTMVAGWD-LNGPGLYYVDSDGTRLKGKRFSV 187
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD YR DLS E+A L AIYHA RD SGG V +Y + GW ++
Sbjct: 188 GSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMS 247
Query: 292 SRDVKDIYNDRKEAPP 307
DV +++ + A P
Sbjct: 248 GTDVGELHYEYYPADP 263
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + G+++A DSRA+ I SQ + K +
Sbjct: 59 GTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIE 95
>gi|357463621|ref|XP_003602092.1| Proteasome subunit beta type [Medicago truncatula]
gi|355491140|gb|AES72343.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 87 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 146
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD+ Y
Sbjct: 147 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 198 KYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELH 250
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 90
>gi|6715438|gb|AAF26416.1|AF217726_1 20S proteasome beta5 subunit [Drosophila melanogaster]
Length = 282
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 106 KIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKG 165
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP LY +D+ G G F VGSG+ YA +LD+ Y
Sbjct: 166 --------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
DL ++EA L AIYHA RD +SGG +R+Y I GW + + D +++
Sbjct: 217 HWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 269
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF++ G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVE 109
>gi|7141312|gb|AAF37285.1|AF226674_1 20S proteasome beta 5 subunit [Trypanosoma brucei]
Length = 250
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 67 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 126
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ +YR NH GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 127 KILANITYQYR--NH------GLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHEIFSVGSG 177
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ +GW Q+ D
Sbjct: 178 SIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKGWTQISRDD 237
Query: 295 VKDIYN 300
+Y+
Sbjct: 238 QTKLYD 243
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GII+A DSRA++ I SQ + K +
Sbjct: 46 GTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLE 82
>gi|388492526|gb|AFK34329.1| unknown [Medicago truncatula]
Length = 271
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 87 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 146
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD+ Y
Sbjct: 147 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 198 KYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELH 250
>gi|336267034|ref|XP_003348283.1| hypothetical protein SMAC_02780 [Sordaria macrospora k-hell]
gi|380091937|emb|CCC10203.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 291
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+ EEA L +I A RD +SGG + LY + GW++ D I+
Sbjct: 207 GVLDAEYRYDLTTEEALELGRRSILAATHRDAYSGGFINLYHVKESGWERHGFNDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIVVATDSRATAGNWIASQTVKKVIE 105
>gi|340057211|emb|CCC51553.1| putative proteasome beta 5 subunit, fragment [Trypanosoma vivax
Y486]
Length = 292
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + + +++ A+
Sbjct: 112 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWQRVLGMECRLWELRNNSRISVAAAS 171
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D GP LY +D+ G ++ F VGSG
Sbjct: 172 RILANITYSYRN--------YGLSMGTMVAGWDH-FGPSLYYVDDKGTRVKHELFSVGSG 222
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR DL+ EEA LA +I+HA RD SGG V +Y ++ +GW Q+ D
Sbjct: 223 SIYAYGVLDQGYRKDLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHEKGWTQISRDD 282
Query: 295 VKDIYN 300
+Y+
Sbjct: 283 QTKLYD 288
>gi|429964048|gb|ELA46046.1| hypothetical protein VCUG_02464 [Vavraia culicis 'floridensis']
Length = 235
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + + +VI V+ ++ T+AG AADC+YW + K YE + + A
Sbjct: 55 TSGSYIASQSVHKVIRVNKYLVSTMAGGAADCLYWEKRMGAFAKLYEVTNGRRLPVPAAV 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N L N V +GLS GT++ +D+ GP++Y LDN G +++GT F VGSG
Sbjct: 115 NYLRNCVVG----------KSGLSIGTMVCGWDDN-GPEIYYLDNEGTMVKGTVFSVGSG 163
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A +L+T YR D+S +EA LA +I++A RD +SGG LY ++ GWQ V D
Sbjct: 164 STIAYGVLNTSYRYDMSRDEALKLARDSIFYATYRDAYSGGSCNLYFMDNDGWQHVGQYD 223
Query: 295 VKDIYNDRKE 304
VKD+Y + E
Sbjct: 224 VKDLYEELIE 233
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQ------KLNKFCQSSL 44
GTTTL F + EGI +A DSRAT+ I SQ ++NK+ S++
Sbjct: 34 GTTTLAFIFKEGIAIAVDSRATSGSYIASQSVHKVIRVNKYLVSTM 79
>gi|226471266|emb|CAX70714.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 105 YTGGERCGPFSQS---STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y+GG S++ S + T+ ++I ++ +L T+AG AADC +W LAK C+ +E
Sbjct: 70 YSGGVIVAADSRATAGSYIASGTTKKIIEINKYLLGTMAGGAADCQFWERVLAKHCRLFE 129
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + +++ A+ LL NMV Y+ GLS GT + +D+ GP +Y +D G
Sbjct: 130 LRNKERISVAAASKLLANMVYNYK--------GMGLSIGTTIVGWDKN-GPGVYYVDTDG 180
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
G F VGSG+ YA +LD Y+ ++S+++AY LA +I+HA RD SGG V LY
Sbjct: 181 NRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDKDAYELAKRSIFHATHRDAASGGFVNLYH 240
Query: 282 INGQGWQQVLSRDVKDIY 299
+ GW+ + DV ++Y
Sbjct: 241 MKEDGWKFIGIFDVGELY 258
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F+Y G+I+A DSRATA I S K +
Sbjct: 59 FLHGTTTLAFKYSGGVIVAADSRATAGSYIASGTTKKIIE 98
>gi|342184267|emb|CCC93748.1| proteasome beta 5 subunit [Trypanosoma congolense IL3000]
Length = 307
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + + +++ A+
Sbjct: 127 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNSRISVAAAS 186
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ +YR GLS GT++A +D+ GP LY +D G ++ F VGSG
Sbjct: 187 KILANITYQYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDGEGTRVKHEIFSVGSG 237
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR DL+ EEA LA +I+HA RD SGG V +Y ++ GW Q+ D
Sbjct: 238 SIYAYGVLDHGYRKDLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHSNGWTQISRDD 297
Query: 295 VKDIYN 300
+Y+
Sbjct: 298 QTKLYD 303
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + +GII+A DSRA++ I SQ + K +
Sbjct: 106 GTTTLGFHFNDGIIIAVDSRASSGQYISSQTVMKVLE 142
>gi|390190132|dbj|BAM21000.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 12/193 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 43 SAGNYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKERISVSAAS 102
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ +YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 103 KLLSNMMCQYR--------GMGLSMGSMICGWDK-KGPGLYYVDDDGTRLSGNLFSTGCG 153
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DLS EEAY L AI HA RD +SGG V +Y + GW +V D
Sbjct: 154 NSYAYGVVDSGYRYDLSVEEAYDLGRRAIAHATHRDAYSGGVVNMYHMKENGWIKVSKDD 213
Query: 295 VKDI---YNDRKE 304
V ++ Y D K+
Sbjct: 214 VAELIHQYMDYKK 226
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I S++ NK +
Sbjct: 22 GTTTLAFKFQHGVIVAVDSRASAGNYIASKEANKVIE 58
>gi|367043622|ref|XP_003652191.1| hypothetical protein THITE_2065666 [Thielavia terrestris NRRL 8126]
gi|346999453|gb|AEO65855.1| hypothetical protein THITE_2065666 [Thielavia terrestris NRRL 8126]
Length = 285
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 8/168 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A E GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTEEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+LD +YR DL+ EEA L + +I A RD +SGG + LY + GW
Sbjct: 207 GVLDAEYRYDLTTEEALELGSRSILAATHRDAYSGGFINLYHVKQDGW 254
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA D I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIIVATDSRATAGDWIASQTVKKVIE 105
>gi|348539958|ref|XP_003457456.1| PREDICTED: proteasome subunit beta type-5-like [Oreochromis
niloticus]
Length = 271
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 92 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLL 151
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 152 ANMVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMY 202
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D+ R DL+ EEA L AIY A RD +SGG V LY ++ +GW ++ DV
Sbjct: 203 AYGVMDSGVRHDLTVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRISQDDVLV 262
Query: 298 IYNDRKE 304
+++ K+
Sbjct: 263 LHHQYKD 269
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 65 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 104
>gi|313226004|emb|CBY21147.1| unnamed protein product [Oikopleura dioica]
gi|313245698|emb|CBY40350.1| unnamed protein product [Oikopleura dioica]
Length = 287
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 12/182 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC +W LA EC+ YE + + +++ A+ LL NMV +Y+
Sbjct: 111 KVIEINPYLLGTMAGGAADCQFWERVLAMECRLYELRNKERISVAAASKLLANMVYQYKG 170
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G +EG+ F VGSG+ +A +LD Y
Sbjct: 171 --------MGLSMGTMVCGWDK-KGPGLYYVDDGGQRLEGSLFSVGSGSLFAYGVLDEGY 221
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI---YNDRK 303
D+ E A LA +IYHA RD SGG V LY + GW+ DVK++ Y+D K
Sbjct: 222 SYDIEVEAAKDLAIRSIYHATYRDAASGGFVNLYHMKETGWEHCGWMDVKELHWKYHDEK 281
Query: 304 EA 305
A
Sbjct: 282 IA 283
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTT L F++ G+++ATDSRATA I SQ++ K +
Sbjct: 75 FNHGTTCLAFKFKHGVMVATDSRATAGGYIASQEVKKVIE 114
>gi|47271420|ref|NP_571467.2| proteasome subunit beta type-8 [Danio rerio]
gi|42490966|gb|AAH66288.1| Proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
Length = 271
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+ LL NM+ YR
Sbjct: 100 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYR- 158
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F G G YA ++D+ Y
Sbjct: 159 -------GMGLSMGSMICGWDK-QGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGY 210
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R D++ EEAY L I HA RD +SGG V LY + GW +V DV ++ + K+
Sbjct: 211 REDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRYKKG 269
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S++ NK +
Sbjct: 67 GTTTLAFKFRHGVIVAVDSRASAGKYIDSKEANKVIE 103
>gi|2654058|gb|AAB87679.1| LMP7 [Danio rerio]
gi|29561859|emb|CAD87792.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Danio rerio]
gi|94732364|emb|CAK04955.1| proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
gi|190338169|gb|AAI62902.1| Psmb8 protein [Danio rerio]
gi|190339582|gb|AAI62883.1| Psmb8 protein [Danio rerio]
Length = 271
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+ LL NM+ YR
Sbjct: 100 KVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYR- 158
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F G G YA ++D+ Y
Sbjct: 159 -------GMGLSMGSMICGWDK-QGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGY 210
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R D++ EEAY L I HA RD +SGG V LY + GW +V DV ++ + K+
Sbjct: 211 REDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSELIHRYKKG 269
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S++ NK +
Sbjct: 67 GTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIE 103
>gi|340914624|gb|EGS17965.1| hypothetical protein CTHT_0059780 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 283
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSELLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+ EEA LA+ +I A RD +SGG + LY + GW + D ++
Sbjct: 207 GVLDAEYRYDLTTEEALDLASRSILAATHRDAYSGGYINLYHVKESGWVKHGFTDTNPVF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHPVYTGGERC 61
GTTTL FR+ EGII+ATDSRATA + I SQ + K + + ELL + G C
Sbjct: 69 GTTTLAFRFKEGIIVATDSRATAGNWIASQTVKKVIEI----NSELLGTMAGGAADC 121
>gi|185133011|ref|NP_001117007.1| proteasome subunit beta type 7b [Salmo salar]
gi|12003013|gb|AAG43440.1|AF184938_1 low molecular mass protein 7 [Salmo salar]
gi|148362121|gb|ABQ59648.1| PSMB8 [Salmo salar]
gi|209738090|gb|ACI69914.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223647058|gb|ACN10287.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|223672927|gb|ACN12645.1| Proteasome subunit beta type-8 precursor [Salmo salar]
gi|262189354|gb|ACY30372.1| PSMB8 [Salmo salar]
Length = 267
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 84 SAGSYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAAS 143
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D GP LY +D+ + G F G G
Sbjct: 144 KLLCNMMLGYR--------GMGLSMGSMIIGWDN-KGPGLYYVDDNATRLSGRMFSTGCG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I HA RD +SGG V LY + GW +V D
Sbjct: 195 SSYAYGVVDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKED 254
Query: 295 VKDI 298
V ++
Sbjct: 255 VSEL 258
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+A DSRA+A I S++ NK +
Sbjct: 63 GTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIE 99
>gi|212721760|ref|NP_001132821.1| uncharacterized protein LOC100194311 [Zea mays]
gi|194695490|gb|ACF81829.1| unknown [Zea mays]
gi|194704048|gb|ACF86108.1| unknown [Zea mays]
gi|195623962|gb|ACG33811.1| proteasome subunit beta type 5 precursor [Zea mays]
gi|413953155|gb|AFW85804.1| proteasome subunit beta type [Zea mays]
Length = 280
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 82 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGTKCRLHELSNKRRISIAGAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G +F VGSG
Sbjct: 142 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLVGNRFSVGSG 192
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR +S EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 193 SLYAYGILDDGYRFSMSVEEAAELARRAIYGATFRDAASGGCVSVYHVGPDGWTKLSGDD 252
Query: 295 VKDIY 299
V +++
Sbjct: 253 VGELH 257
>gi|412986310|emb|CCO14736.1| predicted protein [Bathycoccus prasinos]
Length = 311
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ +L T+AG AADC +W +L +C+ +E + +T+
Sbjct: 88 GPYISSQTVK-----KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELETGKRITVT 142
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + YR GLS GT++A +D GP L+ +D+ G ++G +F V
Sbjct: 143 GASKLLANTLYGYRG--------RGLSMGTMVAGWD-TTGPGLFYVDSDGTRLKGKRFSV 193
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD +R DLS +EA L AIYHA RD SGG V +Y + GW ++
Sbjct: 194 GSGSLFAYGVLDQGFRHDLSIKEAAELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMS 253
Query: 292 SRDVKDIY 299
DV +++
Sbjct: 254 GTDVGELH 261
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 21/73 (28%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNK--------------------FCQSSL 44
GTTTLGF + GII+A DSRA+ I SQ + K F Q +L
Sbjct: 65 GTTTLGFIFEHGIIIAVDSRASQGPYISSQTVKKVIEINPFLLGTMAGGAADCQFWQRNL 124
Query: 45 GDSCELLHPVYTG 57
G C LH + TG
Sbjct: 125 GIQCR-LHELETG 136
>gi|440492714|gb|ELQ75258.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Trachipleistophora hominis]
Length = 251
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 11/190 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI V++ +L T+AG AADC+YW + K YE + + A
Sbjct: 71 TSGSYIASRTVHKVIRVNNYLLTTMAGGAADCLYWEKRMGAFAKLYEVTNGKRLPVPAAV 130
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N L N + R GLS GT++ +D+ GP +Y LDN G +++GT F VGSG
Sbjct: 131 NYLRNCIVGRR----------GLSIGTMVCGWDD-KGPNIYYLDNDGTMVKGTVFSVGSG 179
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A +L+++YR D+S +E LA AI++A RD +SGG V LY ++ GWQ V D
Sbjct: 180 STIAYGLLNSNYRYDMSRDEGLKLARDAIFYATYRDAYSGGFVNLYFMDNNGWQHVGQYD 239
Query: 295 VKDIYNDRKE 304
V +Y + E
Sbjct: 240 VNGLYEELIE 249
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EGI +A DSRAT+ I S+ ++K +
Sbjct: 50 GTTTLAFIFKEGIAIAVDSRATSGSYIASRTVHKVIR 86
>gi|358377748|gb|EHK15431.1| hypothetical protein TRIVIDRAFT_87262 [Trichoderma virens Gv29-8]
Length = 285
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 105/184 (57%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 156 LIYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLSGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL++EEA L +I A RD +SGG + LY + QGW + D I+
Sbjct: 208 GVLDSEYKYDLTDEEALELGKRSILAATHRDAYSGGYINLYHVKEQGWVKHGFLDTNPIF 267
Query: 300 NDRK 303
+ K
Sbjct: 268 WETK 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|327289964|ref|XP_003229694.1| PREDICTED: proteasome subunit beta type-8-like [Anolis
carolinensis]
Length = 230
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAK+C+ Y + + +++ A+ LL NM+ +YR
Sbjct: 59 KVIEINPYLLGTMSGCAADCQYWERLLAKQCRLYYLRNKERISVSAASKLLANMLCEYR- 117
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G+ + G F GSG YA +LD+ +
Sbjct: 118 -------GMGLSVGSMVCGWDKK-GPGLYYIDDNGVRLSGPLFSTGSGNTYAYGVLDSGH 169
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RPDL+ EEAY L AI +A RD +SGG V +Y + GW +V DV ++ + EA
Sbjct: 170 RPDLTVEEAYDLGRKAISYATHRDAYSGGVVNMYHMKEDGWIRVGRTDVSELLSQYDEA 228
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+ATDSRA+A + I + NK +
Sbjct: 26 GTTTLAFTFQHGVIVATDSRASAGNYIATLLCNKVIE 62
>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
RN66]
gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
muris RN66]
Length = 279
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q + + ++I +++ +L T+AG AADC YW LAK C+ +E + + +++ A+
Sbjct: 89 TQGGYIASGSVKKIIEINNYLLGTMAGGAADCSYWERVLAKLCRLHELRNKQRISVAGAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
NL+ N+ YR GLS G +++ YD+ GPQLY +DN+G ++G +F +GSG
Sbjct: 149 NLIANIFFHYRN--------YGLSAGIMISGYDK-NGPQLYYVDNSGARVKGNRFSIGSG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
+ YA +LD+ + DL++E+A L AI HA RD SGG VR+Y+I QG++ +S
Sbjct: 200 SVYAIGVLDSVHHFDLTDEDAIELGRRAITHATYRDGGSGGLVRVYQITSQGYKVHIS 257
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 1 MFITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
M GTTTLGF Y G+ILA DSRAT I S + K +
Sbjct: 64 MINKGTTTLGFIYQGGVILAVDSRATQGGYIASGSVKKIIE 104
>gi|428673094|gb|EKX74007.1| proteasome beta 5 subunit, putative [Babesia equi]
Length = 264
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + +VI ++S +L T+AG AADC YW LAK C+ +E + ++ +++ A+
Sbjct: 76 SMGSIISTQNVSKVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQSRISVGAAS 135
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N+ +R GLS GT++A +D GP LY + + G ++G F VGSG
Sbjct: 136 QLLANIFFYFR--------GYGLSAGTMIAGHDA-KGPHLYYVSSEGERLKGRLFSVGSG 186
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS-R 293
+ +A ++D YR D+S EEA LAT AIY A RD SGG V LY ++ GW +++ R
Sbjct: 187 SLFAYGVIDQHYRSDMSLEEAVELATRAIYQAAHRDGFSGGAVNLYHVHKDGWTKLVDRR 246
Query: 294 DVKDIYNDRKE 304
D+ +++ + E
Sbjct: 247 DIGELHYEYLE 257
>gi|342890147|gb|EGU89011.1| hypothetical protein FOXB_00423 [Fusarium oxysporum Fo5176]
Length = 1820
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 15/182 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 1631 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 1690
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 1691 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 1742
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DLS+EEA L +I A RD +SGG + LY + +GW VK +
Sbjct: 1743 GVLDAEYKYDLSDEEALELGKRSILAATHRDAYSGGYINLYHVKEEGW-------VKHGF 1795
Query: 300 ND 301
ND
Sbjct: 1796 ND 1797
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 1605 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 1641
>gi|16588840|gb|AAL26914.1|AF323592_1 putative 20S proteasome beta subunit 5, partial [Prunus persica]
Length = 201
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 17 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 76
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD Y
Sbjct: 77 --------MGLSVGTMIAGWDET-GPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDDGY 127
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D+S EEA LA AIYHA RD SGG +Y + GW+++ DV +++
Sbjct: 128 RYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVGELH 180
>gi|449300001|gb|EMC96014.1| hypothetical protein BAUCODRAFT_70978 [Baudoinia compniacensis UAMH
10762]
Length = 285
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +DN G + G FCVGSG +A
Sbjct: 156 LVYSYKG--------MGLSMGTMCAGVTPMEGPALYYVDNDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+LD +Y+ D+ E+EA L +I A RD +SGG V LY I +GW
Sbjct: 208 GVLDAEYKYDMEEDEALELGRRSILAATHRDAYSGGFVNLYHIKEEGW 255
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|169146058|emb|CAQ14651.1| proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 9/176 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 91 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 150
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 151 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMYAY 201
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
++D+ R DL+ +EA L AIY A RD +SGG V LY+++ +GW++V DV
Sbjct: 202 GVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQEDV 257
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 101
>gi|49456283|emb|CAG46462.1| PSMB8 [Homo sapiens]
Length = 272
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + G +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGLVKVESTDVSDLLHQYREA 270
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 104
>gi|302825012|ref|XP_002994143.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
gi|300138019|gb|EFJ04804.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
Length = 275
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L T+AG AADC +W +L C+ +E + +++ A+ LL N + YR
Sbjct: 88 KILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELANKRRISVAGASKLLANTLYSYRG 147
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP L+ +D+ G +GT F VGSG+ YA ILD+ Y
Sbjct: 148 --------MGLSMGTMIAGWDET-GPALFYVDSEGGRTKGTLFSVGSGSTYAYGILDSGY 198
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ ++S EEA L AIYHA RD SGG +Y I QGW+++ DV +++
Sbjct: 199 KYEMSVEEAVELGRRAIYHATFRDGASGGVASVYHIGPQGWKKISGDDVSELH 251
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + GII+A DSRA+ I SQ + K +
Sbjct: 55 GTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILE 91
>gi|60826857|gb|AAX36774.1| proteasome subunit beta type 8 [synthetic construct]
Length = 273
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
RP+LS EEAY L AI +A RD +SGG V +Y + G +V S DV D+ + +EA
Sbjct: 212 RPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKEDGLVKVESTDVSDLLHQYREA 270
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 68 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIE 104
>gi|281208762|gb|EFA82937.1| proteasome subunit beta type 5 [Polysphondylium pallidum PN500]
Length = 277
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q S V T +VI ++ +L T+AG AADC YW L ++C+ +E + + +++ A+
Sbjct: 83 TQGSYVASRTVKKVIEITPYLLGTMAGGAADCSYWERELGRQCRLFELRNKEMISVAAAS 142
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V Y+ GLS GT++ +D+ GP LY +D+ G ++G +F VGSG
Sbjct: 143 KILANIVYGYKG--------YGLSMGTMVTGWDKT-GPCLYYVDSEGTRLKGLRFAVGSG 193
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD+ + ++++E+A L ++YHA RD SGG + +Y + GW+++ S D
Sbjct: 194 STYAYGVLDSGFDWNMTDEQACELGRRSVYHATHRDAMSGGFINVYHVQKDGWKKISSDD 253
Query: 295 VKDIYNDRKEAPPGGGD 311
+Y G D
Sbjct: 254 CFQLYQKYYNVKATGVD 270
>gi|157423071|gb|AAI53590.1| Psmb5 protein [Danio rerio]
Length = 269
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 9/176 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 91 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 150
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 151 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMYAY 201
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
++D+ R DL+ +EA L AIY A RD +SGG V LY+++ +GW++V DV
Sbjct: 202 GVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQEDV 257
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 101
>gi|449018114|dbj|BAM81516.1| 20S core proteasome subunit beta 5 [Cyanidioschyzon merolae strain
10D]
Length = 299
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 9/173 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W L C+ +E ++R +++ A+
Sbjct: 91 SMGQYIGSGTVKKIIEINPYLLGTMAGGAADCSFWERYLGMRCRLHELQHRERISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N+V +Y+ GLS GT++A +D+ GPQL+ +D+ G+ + GT+F VGSG
Sbjct: 151 KLLANIVYEYK--------GMGLSMGTMIAGWDKT-GPQLFYVDSDGVRLRGTRFSVGSG 201
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+ +A +LD YR D+ EA L AI+HA RD +SGG + +Y + GW
Sbjct: 202 STFAYGVLDQFYRWDMDAAEAAELGRRAIFHATHRDAYSGGYINVYHVKADGW 254
>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
Length = 273
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V +Y I GW +V DV ++ + K+
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHYKKG 271
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+ I + + NK +
Sbjct: 69 GTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIE 105
>gi|5833459|gb|AAD53518.1|AF155578_1 proteasome subunit beta 5 [Danio rerio]
Length = 255
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 9/176 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 77 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 136
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 137 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMYAY 187
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
++D+ R DL+ +EA L AIY A RD +SGG V LY+++ +GW++V DV
Sbjct: 188 GVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQEDV 243
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 48 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 87
>gi|302781737|ref|XP_002972642.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
gi|300159243|gb|EFJ25863.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
Length = 277
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L T+AG AADC +W +L C+ +E + +++ A+ LL N + YR
Sbjct: 90 KILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELANKRRISVAGASKLLANTLYSYRG 149
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP L+ +D+ G +GT F VGSG+ YA ILD+ Y
Sbjct: 150 --------MGLSMGTMIAGWDET-GPALFYVDSEGGRTKGTLFSVGSGSTYAYGILDSGY 200
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ ++S EEA L AIYHA RD SGG +Y I QGW+++ DV +++
Sbjct: 201 KFEMSVEEAVELGRRAIYHATFRDGASGGVASVYHIGPQGWKKISGDDVSELH 253
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + GII+A DSRA+ I SQ + K +
Sbjct: 57 GTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILE 93
>gi|302915857|ref|XP_003051739.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732678|gb|EEU46026.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 282
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L +I A RD +SGG + LY + +GW + D I+
Sbjct: 205 GVLDAEYRYDLTDEEALELGKRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIF 264
Query: 300 NDRK 303
K
Sbjct: 265 WKTK 268
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|315518855|dbj|BAJ51756.1| proteasome subunit, beta type 8 [Oryzias celebensis]
gi|315518866|dbj|BAJ51763.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518875|dbj|BAJ51769.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 273
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L AI HA RD +SGG V +Y I GW +V DV ++ + K+
Sbjct: 213 KEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHYKKG 271
>gi|50878269|ref|NP_571226.1| proteasome subunit beta type-5 [Danio rerio]
gi|48734690|gb|AAH71478.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 108/180 (60%), Gaps = 9/180 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 91 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 150
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 151 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGGLFAVGSGSMYAY 201
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D+ R DL+ +EA L AIY A RD +SGG V LY+++ +GW++V DV ++
Sbjct: 202 GVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWERVSQEDVLQLH 261
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 101
>gi|168014771|ref|XP_001759925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689055|gb|EDQ75429.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 12/183 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L T+AG AADC +W +L C+ +E + +++ A+ LL N + YR
Sbjct: 86 KILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELANKRRISVTGASKLLANTLYSYRG 145
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LDT +
Sbjct: 146 --------MGLSMGTMIAGWDET-GPGLYYVDSEGGRVKGTRFSVGSGSTYAYGVLDTGF 196
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI---YNDRK 303
D+S +EA LA +IYHA RD SGG V +Y + GW+++ DV ++ Y +
Sbjct: 197 NWDMSIDEAVELARRSIYHATFRDGASGGVVSVYYVGPGGWKKMSGDDVGELHYSYYPVQ 256
Query: 304 EAP 306
E P
Sbjct: 257 EVP 259
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+A DSRA+ + I SQ + K +
Sbjct: 53 GTTTLAFVFKHGVIVAADSRASMGNYISSQSVKKILE 89
>gi|14594931|emb|CAC43326.1| putative beta5 proteasome subunit [Nicotiana tabacum]
Length = 174
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + ++ A+ LL N++ YR
Sbjct: 14 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRTSVAGASKLLANILYSYRG 73
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD+ Y
Sbjct: 74 --------MGLSVGTMIAGWDE-KGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 124
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
R DLS EEA LA AIYHA RD SGG +Y + GW+++ DV
Sbjct: 125 RFDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDV 173
>gi|219567042|dbj|BAH05039.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 238
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 67 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNSHRISVAAASKLLCNMMLGYR- 125
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG YA +LD+ Y
Sbjct: 126 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGRNYAYGVLDSGY 177
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L AI HA RD +SGG V +Y I GW +V DV ++ + K+
Sbjct: 178 KEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHYKKG 236
>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 67 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 125
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG YA +LD+ Y
Sbjct: 126 -------GMGLSVGSMICGWDK-EGPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGY 177
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V LY I GW +V DV ++ + K+
Sbjct: 178 KEDMTVEEAYELGRRGIAHATHRDSYSGGVVNLYHIKEDGWIKVCKDDVSELIHHYKKG 236
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + + NK +
Sbjct: 34 GTTTLAFKFKHGVIVAVDSRASAGNYISTGEYNKVIE 70
>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 67 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 125
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 126 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 177
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V +Y I GW +V DV ++ + K+
Sbjct: 178 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHRYKKG 236
>gi|261199568|ref|XP_002626185.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239594393|gb|EEQ76974.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239615558|gb|EEQ92545.1| proteasome component PRE2 [Ajellomyces dermatitidis ER-3]
gi|327354709|gb|EGE83566.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 283
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL++EEA L +I A RD +SGG + LY + GW++ D I+
Sbjct: 206 GVLDAEYRFDLTDEEALELGRRSILAATHRDAYSGGYINLYHVKEAGWEKHGFNDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 273
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGVYYVDDNGTRLSGRMFSTGSGNSYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V LY I GW +V DV ++ + K+
Sbjct: 213 KEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLYHIKEDGWIKVCKDDVSELIHHYKKG 271
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + + NK +
Sbjct: 69 GTTTLAFKFKHGVIVAVDSRASAGNYISTGEYNKVIE 105
>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
Length = 225
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 54 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 112
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 113 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 164
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V +Y I GW +V DV ++ + K+
Sbjct: 165 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDGWIKVCKDDVSELLHHYKKG 223
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+ I + + NK +
Sbjct: 21 GTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIE 57
>gi|159481070|ref|XP_001698605.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
gi|158282345|gb|EDP08098.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
Length = 273
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 9/180 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W +L +C+ YE +T+R A+ LL N
Sbjct: 85 ISSQTVKKVIEINKFLLGTMAGGAADCQFWQRNLGMQCRLYELNNGKRITVRAASKLLSN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ YR GLS GT++A +D GP LY +D+ G +G F VGSG+ YA
Sbjct: 145 VMFSYRG--------MGLSMGTMVAGWDPT-GPGLYYVDSDGQRTKGQIFSVGSGSLYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD YR D+ EEA L +IYHA RD SGG V +Y + GW +V D+ +++
Sbjct: 196 GVLDAGYRWDMPVEEAVELGRRSIYHAGFRDCASGGTVSVYHVTQDGWTKVRGDDISELH 255
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + G+I+A DSRAT I SQ + K +
Sbjct: 59 GTTTLGFIFQHGVIIAVDSRATMGAYISSQTVKKVIE 95
>gi|410079246|ref|XP_003957204.1| hypothetical protein KAFR_0D04210 [Kazachstania africana CBS 2517]
gi|372463789|emb|CCF58069.1| hypothetical protein KAFR_0D04210 [Kazachstania africana CBS 2517]
Length = 287
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 8/186 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGSQCRLHELKEKDRISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDLFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ EEA L +I A RD +SGG + LY + GW + DV +
Sbjct: 213 GVLDSNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHDVGSTF 272
Query: 300 NDRKEA 305
D KE+
Sbjct: 273 WDIKES 278
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|195122572|ref|XP_002005785.1| GI18886 [Drosophila mojavensis]
gi|193910853|gb|EDW09720.1| GI18886 [Drosophila mojavensis]
Length = 279
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 18/199 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGG+ G SQS +++ ++ +L TLAG AADCVYW L+KEC+ +E + +
Sbjct: 94 TGGQYIG--SQSMK-------KIVEINQFLLGTLAGGAADCVYWDRVLSKECRLHELRNK 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ ++ N+ +Y+ GLS G ++A YD+ GP LY +D+ G
Sbjct: 145 ERISVAAASKIMANIAHEYKG--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTP 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G F VGSG+ YA +LD+ Y DL + A L AIYHA RD +SGG +R+Y +
Sbjct: 196 GNVFSVGSGSIYAFGVLDSGYHWDLEDAAAQELGRRAIYHATFRDAYSGGIIRVYHMTKN 255
Query: 286 GWQQVLSRDVKDIYNDRKE 304
GW ++ D +++ KE
Sbjct: 256 GWIKISETDCMELHYKYKE 274
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYQGGVILAVDSRATGGQYIGSQSMKKIVE 109
>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
Length = 280
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LAKEC+ +E + + +++ A+ ++ N+ +
Sbjct: 103 TMKKIVEINQFLLGTLAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIMANIAHE 162
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GLS G ++A YD+ GP LY +D+ G G F VGSG+ +A +LD
Sbjct: 163 YKG--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNVFSVGSGSIFAFGVLD 213
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ Y DL + EA L AIYHA RD +SGG VR+Y + GW ++ D +++
Sbjct: 214 SGYHWDLKDTEAQELGRRAIYHATFRDAYSGGIVRVYHMTPNGWIKISDTDCMELH 269
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVE 109
>gi|344302845|gb|EGW33119.1| proteasome component PRE2 precursor [Spathaspora passalidarum NRRL
Y-27907]
Length = 282
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 108/185 (58%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 96 IASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ + + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 156 LVYEYK--------GMGLSMGTMVCGHTKKEGPAIYYVDSDGTRLKGDLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ EEA L +I A RD +SGG + LY IN QGW + +V D++
Sbjct: 208 GVLDSEYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHINEQGWTYHGNHNVGDVF 267
Query: 300 NDRKE 304
D ++
Sbjct: 268 WDIRD 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 106
>gi|18124203|gb|AAL59862.1|AF363583_1 proteasome beta-subunit LMP7 [Heterodontus francisci]
Length = 276
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAK+C+ Y+ + + +T+ A+ LL NM+ +YR
Sbjct: 101 KVIEINPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRITVSAASKLLCNMMCEYRG 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F G G YA ++D+ Y
Sbjct: 161 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGNMFSTGCGNAYAYGVVDSGY 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DL+ EEAY L AIYHA RD ++GG + +Y + GW +V +V +++
Sbjct: 212 RYDLTVEEAYDLGRRAIYHATHRDAYTGGFINMYHMREDGWIKVSKDNVGELH 264
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 65 FQHGTTTLAFKFEHGVIVAVDSRASAGNFLASGDANKVIE 104
>gi|30802211|gb|AAH51450.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 13/181 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTG--MTIRHAANLLVNMVRKY 184
+VI ++ +L T++G AADC YW LAKEC+ C R G +++ A+ LL NM+ +Y
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECR--LCYLRNGERISVSAASKLLSNMMLQY 162
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+
Sbjct: 163 RG--------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFPTGSGNTYAYGVMDS 213
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR DLS EEAY L AI +A RD +SGG V +Y + GW +V S DV D+ E
Sbjct: 214 GYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKYGE 273
Query: 305 A 305
A
Sbjct: 274 A 274
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|393239729|gb|EJD47259.1| 20S proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 309
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ YE + +++ A+ L
Sbjct: 98 SYIASGTVKKVIEINRFLLGTMAGTAADCQYWETYLGMQCRLYELREGQRISVAAASKYL 157
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
VN+VR+Y+ G+S GT++ +D+ GP LY +D+ G ++G F VGSG+ +
Sbjct: 158 VNLVRRYK--------GMGISMGTMICGWDKT-GPALYYVDSDGTRLKGDLFSVGSGSTF 208
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ILD +YR DL++ EA L AIY A RD SG V LY++ GW+ + + D+
Sbjct: 209 AYGILDPEYRWDLTDAEAQELGRRAIYAAGHRDAFSGNSVNLYQVRENGWEFIDNYDISK 268
Query: 298 IY 299
++
Sbjct: 269 LH 270
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRAT I S + K +
Sbjct: 74 GTTTLAFRFQGGIIVAVDSRATGGSYIASGTVKKVIE 110
>gi|302307794|ref|NP_984534.2| AEL326Cp [Ashbya gossypii ATCC 10895]
gi|299789172|gb|AAS52358.2| AEL326Cp [Ashbya gossypii ATCC 10895]
gi|374107748|gb|AEY96655.1| FAEL326Cp [Ashbya gossypii FDAG1]
Length = 285
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+ +L N
Sbjct: 99 IASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKILSN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 159 LVYEYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+YR DLS E+A L +I A RD +SGG V LY + GW + DV ++
Sbjct: 211 GVLDTNYRWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTENGWVYHGNHDVGALF 270
Query: 300 NDRKE 304
+ KE
Sbjct: 271 WEIKE 275
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA I SQ + K +
Sbjct: 73 GTTTLAFRFQGGIVVAVDSRATAGQWIASQTVKKVIE 109
>gi|380492983|emb|CCF34208.1| proteasome component PRE2 [Colletotrichum higginsianum]
Length = 286
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 97 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 157 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLPGNLFCVGSGQTFAY 208
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+++EA L + +I A RD +SGG + LY + +GW + D I+
Sbjct: 209 GVLDAEYRYDLTDQEALDLGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIF 268
Query: 300 NDRK 303
K
Sbjct: 269 WKTK 272
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 71 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 107
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L T+AG AADC +W +L C+ +E + +++ A+ LL N + YR
Sbjct: 93 KILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELGNKRRISVTGASKLLANTLYSYRG 152
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LDT +
Sbjct: 153 --------MGLSMGTMIAGWDET-GPGLYYVDSEGGRVKGRRFSVGSGSTYAYGVLDTGF 203
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R D++ EEA LA +IYHA RD SGG +Y + GW+++ DV +++
Sbjct: 204 RWDMTVEEAVELARRSIYHATFRDGASGGVASVYYVGPDGWKKMSGDDVGELH 256
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+I+A DSRA+ + I SQ + K +
Sbjct: 60 GTTTLAFVFKEGVIVAADSRASMGNYISSQDVKKILE 96
>gi|363749853|ref|XP_003645144.1| hypothetical protein Ecym_2614 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888777|gb|AET38327.1| Hypothetical protein Ecym_2614 [Eremothecium cymbalariae
DBVPG#7215]
Length = 285
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+ +L N
Sbjct: 99 IASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKILGN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G+ ++G FCVGSG +A
Sbjct: 159 LVYEYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGMRLKGDLFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+Y+ DL+ EEA L +I A RD +SGG V LY + GW + DV ++
Sbjct: 211 GVLDTNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSVNLYHVTENGWVFHGNYDVGTLF 270
Query: 300 NDRKE 304
+ KE
Sbjct: 271 WEIKE 275
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA I SQ + K +
Sbjct: 73 GTTTLAFRFQGGIVVAVDSRATAGQWIASQTVKKVIE 109
>gi|1405327|dbj|BAA10934.1| LMP7 [Ginglymostoma cirratum]
Length = 278
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAK+C+ Y+ + + +++ A+ LL NM+ +YR
Sbjct: 103 KVIEINPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEYRG 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F G G YA ++D+ Y
Sbjct: 163 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGNMFSTGCGNVYAYGVVDSGY 213
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R DL+ EEAY L AIYHA RD ++GG V +Y + GW +V DV +++
Sbjct: 214 RYDLTVEEAYDLGRRAIYHATHRDAYTGGFVNMYHMREDGWIKVSKDDVGELH 266
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 70 GTTTLAFKFQHGVIVAVDSRASAGNYLASVDANKVIE 106
>gi|12003011|gb|AAG43439.1|AF184937_1 low molecular mass protein 7 [Salmo salar]
Length = 267
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+A DC YW LAKEC+ Y+ + + +++ A+
Sbjct: 84 SAGSYIASKEANKVIEINPYLLGTMSGSAGDCQYWERLLAKECRLYKLRNKQRISVSAAS 143
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D GP LY +D+ + G F G G
Sbjct: 144 KLLCNMMLGYR--------GMGLSMGSMIIGWDN-KGPGLYYVDDNATRLSGRMFSTGCG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I HA RD +SGG V LY + GW +V D
Sbjct: 195 SSYAYGVVDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKED 254
Query: 295 VKDI 298
V ++
Sbjct: 255 VSEL 258
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+A DSRA+A I S++ NK +
Sbjct: 63 GTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIE 99
>gi|315518857|dbj|BAJ51757.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 273
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGNSYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ D++ EEAY L I HA RD +SGG V LY I GW +V DV ++ + K+
Sbjct: 213 KEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLYHIQEDGWIKVCKDDVSELIHHYKQG 271
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + + NK +
Sbjct: 69 GTTTLAFKFKHGVIVAVDSRASAGNYISAGEYNKVIE 105
>gi|119193488|ref|XP_001247350.1| proteasome component [Coccidioides immitis RS]
gi|303312031|ref|XP_003066027.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105689|gb|EER23882.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320040001|gb|EFW21935.1| proteasome component [Coccidioides posadasii str. Silveira]
gi|392863404|gb|EAS35847.2| proteasome component [Coccidioides immitis RS]
Length = 283
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L C+ +E +++ +++ A+ LL N
Sbjct: 94 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYNYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+EEEA L +I A RD +SGG V LY + GW + D+ I+
Sbjct: 206 GVLDAEYRYDLTEEEALNLGRRSILAAMHRDAYSGGFVNLYHVKEDGWVKHGFNDMNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKEK 269
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|302836892|ref|XP_002950006.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
gi|300264915|gb|EFJ49109.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
Length = 272
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 14/188 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S TV +VI ++ ++ T+AG AADC +W +L C+ YE +T+
Sbjct: 81 GSFISSQTVK-----KVIEINKHLIGTMAGGAADCQFWQRNLGMRCRLYELNNGKRITVC 135
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL N + YR GLS GT++A +D GP LY +D+ G +G F V
Sbjct: 136 AASKLLANTMFSYRG--------MGLSMGTMVAGWDST-GPGLYYVDSDGQRTKGQIFSV 186
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +LD+ YR DLS EEA L +IYHA RD SGG V +Y + GW +V
Sbjct: 187 GSGSLYAYGVLDSGYRWDLSVEEAIELGRRSIYHAGFRDCASGGTVSVYHVTQDGWTKVR 246
Query: 292 SRDVKDIY 299
DV +++
Sbjct: 247 GDDVTELH 254
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + G+I+A DSRAT I SQ + K +
Sbjct: 58 GTTTLGFIFQHGVIIAVDSRATMGSFISSQTVKKVIE 94
>gi|440476205|gb|ELQ44826.1| proteasome component PRE2 [Magnaporthe oryzae Y34]
gi|440491104|gb|ELQ70570.1| proteasome component PRE2 [Magnaporthe oryzae P131]
Length = 251
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 11/204 (5%)
Query: 103 PVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKG 159
PV GG S+++ + T +VI ++S +L T+AG AADC YWL L +C+
Sbjct: 42 PVAHGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRL 101
Query: 160 YECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDN 219
+E +++ +++ A+ +L N+V +Y+ GLS GT+ A + GP LY +D+
Sbjct: 102 HELRHKRRISVAAASKILANLVYQYK--------GMGLSMGTMCAGVTKEEGPALYYIDS 153
Query: 220 TGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
G + G FCVGSG +A +LD +Y+ DLS+E+A L +I A RD +SGG + L
Sbjct: 154 DGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLSDEDALELGRRSILAATHRDAYSGGFINL 213
Query: 280 YKINGQGWQQVLSRDVKDIYNDRK 303
Y + GW + D I+ K
Sbjct: 214 YHVKEDGWVKHGFNDTNPIFWKTK 237
>gi|254580841|ref|XP_002496406.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
gi|238939297|emb|CAR27473.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
Length = 287
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 8/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+
Sbjct: 96 SAGSWVASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAAS 155
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG
Sbjct: 156 KILCNLVYEYK--------GYGLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDIFCVGSG 207
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +LD++Y+ DLS EEA L +I A RD +SGG V LY + GW + D
Sbjct: 208 QTFAYGVLDSNYKWDLSVEEALYLGKRSIIAATHRDAYSGGSVNLYHVTENGWVFHGNHD 267
Query: 295 VKDIYNDRKE 304
V + + KE
Sbjct: 268 VGETFWQIKE 277
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRA+A + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRASAGSWVASQTVKKVIE 111
>gi|225706814|gb|ACO09253.1| Proteasome subunit beta type 5 precursor [Osmerus mordax]
Length = 221
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 44 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 103
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 104 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMYAY 154
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D+ R DL+ E+A L AIY A RD +SGG V LY ++ +GW +V DV ++
Sbjct: 155 GVVDSGLRQDLTVEQACELGRRAIYQATYRDAYSGGQVNLYHVHSKGWDRVSQEDVLMLH 214
Query: 300 NDRKEAP 306
+ K AP
Sbjct: 215 HQYK-AP 220
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 15 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 54
>gi|426376395|ref|XP_004054986.1| PREDICTED: proteasome subunit beta type-5 isoform 7 [Gorilla
gorilla gorilla]
Length = 160
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC +W LA++C+ YE + + +++ A+ LL NMV +Y+ GLS
Sbjct: 1 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
GT++ +D+ GP LY +D+ G I G F VGSG+ YA ++D Y DL E+AY L
Sbjct: 53 MGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
A AIY A RD +SGG V LY + GW +V S +V D++ + P
Sbjct: 112 ARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSAP 160
>gi|403221234|dbj|BAM39367.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 267
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 15/190 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP + V +VI ++S +L T+AG AADC YW LAK C+ +E + ++ +++
Sbjct: 78 MGPIVSTQNVS-----KVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQSRISV 132
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L N+ ++ GLS GT++A YD + GP LY + N G ++G F
Sbjct: 133 GAASQILANIFYYFK--------GYGLSAGTMIAGYD-LNGPGLYYVSNDGERMKGRLFS 183
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ +A ++D YR +++ +EA L + AIY A RD +SGG V LY ++ GW ++
Sbjct: 184 VGSGSMFAYGVIDEGYRSNMTLQEAVELGSRAIYQAAHRDGYSGGVVNLYHVHKDGWTKL 243
Query: 291 LSR-DVKDIY 299
+ R DV +I+
Sbjct: 244 IDRKDVNEIH 253
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + G+ILA DSRA+ ++ +Q ++K +
Sbjct: 53 FHKGTTTLGFVFDHGVILAVDSRASMGPIVSTQNVSKVIE 92
>gi|219567066|dbj|BAH05051.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGNYLASNNVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNNVNKVIE 70
>gi|365982101|ref|XP_003667884.1| hypothetical protein NDAI_0A04860 [Naumovozyma dairenensis CBS 421]
gi|343766650|emb|CCD22641.1| hypothetical protein NDAI_0A04860 [Naumovozyma dairenensis CBS 421]
Length = 287
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E K + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKNRISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLQGDLFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ EEA L +I A RD +SGG + LY I +GW + DV +
Sbjct: 213 GVLDSNYKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHITEEGWVYHGNHDVGSTF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFKGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|195539356|ref|NP_001124197.1| proteasome subunit beta type-5 isoform 2 [Homo sapiens]
gi|332223028|ref|XP_003260673.1| PREDICTED: proteasome subunit beta type-5 isoform 4 [Nomascus
leucogenys]
Length = 160
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC +W LA++C+ YE + + +++ A+ LL NMV +Y+ GLS
Sbjct: 1 MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
GT++ +D+ GP LY +D+ G I G F VGSG+ YA ++D Y DL E+AY L
Sbjct: 53 MGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
A AIY A RD +SGG V LY + GW +V S +V D++ + P
Sbjct: 112 ARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 160
>gi|302334368|gb|ADL27419.1| proteasome subunit beta type [Pheronema raphanus]
Length = 279
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW LA+EC+ YE + + +++ A+ +L
Sbjct: 99 SWIASQTCKKVIEINPYLLGTMAGGAADCSYWERRLAQECRLYELRNKERISVAAASKVL 158
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N + Y+ GLS GT++ +D+ GP LY +D+ G + F VGSG+ Y
Sbjct: 159 SNFLYYYKG--------MGLSVGTMICGWDK-KGPGLYYVDSDGTRMTHHMFSVGSGSVY 209
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD+ Y+ DLS++EA L +IYHA RD +SGG V LY + GW ++ DV
Sbjct: 210 AYGVLDSGYKWDLSDDEARELGRRSIYHATHRDAYSGGVVNLYHMKETGWIKISQDDVMT 269
Query: 298 IYNDRKE 304
++ E
Sbjct: 270 LHYKYAE 276
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F+Y G+I+A DSRATA I SQ K +
Sbjct: 72 FDHGTTTLAFKYQGGVIVAVDSRATAGSWIASQTCKKVIE 111
>gi|310790979|gb|EFQ26512.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 286
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 97 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 157 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLPGNLFCVGSGQTFAY 208
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+++EA L + +I A RD SGG + LY + +GW + D I+
Sbjct: 209 GVLDAEYRYDLTDQEALDLGSRSILAATHRDAFSGGFINLYHVKEEGWVKHGFNDTNPIF 268
Query: 300 NDRK 303
K
Sbjct: 269 WKTK 272
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 71 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 107
>gi|407409749|gb|EKF32460.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 311
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 131 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 190
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 191 KILANITYSYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHELFSVGSG 241
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ GW QV D
Sbjct: 242 SIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGGWTQVSRDD 301
Query: 295 VKDIYN 300
+Y+
Sbjct: 302 QTKLYD 307
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GII+A DSRA++ I SQ + K +
Sbjct: 110 GTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLE 146
>gi|116180334|ref|XP_001220016.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185092|gb|EAQ92560.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 283
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINSDLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + G LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYQYK--------GMGLSMGTMCAGVTKEEGAALYYIDSDGTRLAGDLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++YR DL+ EEA L + +I A RD +SGG + LY + GW++ D ++
Sbjct: 205 GVLDSEYRWDLTTEEALELGSRSILAATHRDAYSGGFINLYHVKETGWEKHGFTDTNPVF 264
Query: 300 NDRK 303
K
Sbjct: 265 WKTK 268
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|219567024|dbj|BAH05030.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 275
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGQYLASNNVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNSQRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 263 VSDLIHRYREG 273
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGQYLASNNVNKVIE 107
>gi|126136741|ref|XP_001384894.1| hypothetical protein PICST_36375 [Scheffersomyces stipitis CBS
6054]
gi|126092116|gb|ABN66865.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 282
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q + + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+
Sbjct: 91 TQGNWIASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG
Sbjct: 151 KILGNLVYEYK--------GMGLSMGTMVCGYTKKEGPTIYYVDSDGSRLKGDLFCVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +LD++Y+ DL+ EEA L +I A RD +SGG V LY + GW + +
Sbjct: 203 QTFAYGVLDSEYKWDLTVEEALYLGKRSILAATHRDAYSGGSVNLYHVTENGWIYHGNHN 262
Query: 295 VKDIYNDRK 303
V DI+ D K
Sbjct: 263 VGDIFWDIK 271
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRAT + I SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATQGNWIASQTVNKVIR 106
>gi|400602517|gb|EJP70119.1| proteasome component PRE2 [Beauveria bassiana ARSEF 2860]
Length = 285
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +DN G + G FCVGSG +A
Sbjct: 156 LVYSYKG--------MGLSMGTMCAGVTPEEGPALYYVDNDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y DLS+E+A L +I A RD +SGG + LY + +GW + D I+
Sbjct: 208 GVLDAEYNYDLSDEDALELGRRSILAATHRDAYSGGYINLYHVKQEGWVKHGFNDTNPIF 267
Query: 300 NDRK 303
K
Sbjct: 268 WKTK 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|222634976|gb|EEE65108.1| hypothetical protein OsJ_20167 [Oryza sativa Japonica Group]
Length = 277
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGAS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G++F VGSG
Sbjct: 141 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLMGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR + EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 192 SLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGKYLASNNVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGKYLASNNVNKVIE 70
>gi|389642645|ref|XP_003718955.1| proteasome component PRE2 [Magnaporthe oryzae 70-15]
gi|351641508|gb|EHA49371.1| proteasome component PRE2 [Magnaporthe oryzae 70-15]
Length = 284
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DLS+E+A L +I A RD +SGG + LY + GW + D I+
Sbjct: 207 GVLDAEYKYDLSDEDALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|115466486|ref|NP_001056842.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|55297435|dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594882|dbj|BAF18756.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|215737492|dbj|BAG96622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737619|dbj|BAG96749.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGAS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G++F VGSG
Sbjct: 141 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLMGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR + EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 192 SLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|8671510|dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 277
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGAS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G++F VGSG
Sbjct: 141 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLMGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR + EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 192 SLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|46125017|ref|XP_387062.1| hypothetical protein FG06886.1 [Gibberella zeae PH-1]
gi|408388279|gb|EKJ67965.1| hypothetical protein FPSE_11776 [Fusarium pseudograminearum CS3096]
Length = 283
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYK--------GMGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ +LS+EEA L +I A RD +SGG + LY + +GW + D I+
Sbjct: 206 GVLDAEYKYELSDEEALELGKRSILAATHRDAYSGGYINLYHVKEEGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|403268781|ref|XP_003926445.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 252
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ DC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 94 AGSYIDCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG--------MGLSM 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 205 RRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 250
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHPVYTGGERCGQS 64
GTTTL F++ G+I+A DSRA+A I Q + L C L + GER S
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDCQYWERL----LAKECRLYY--LRNGERISVS 125
Query: 65 YSQR 68
+ +
Sbjct: 126 AASK 129
>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 238
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 55 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDHNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 226 VSELIHRYREG 236
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 70
>gi|229367710|gb|ACQ58835.1| Proteasome subunit beta type-8 precursor [Anoplopoma fimbria]
Length = 275
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGRYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNQRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDEGKRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 SSYAYGVVDSGYRDDMTVEEAYELGRRGIAHATHRDAYSGGVVNMYHMQEDGWIKVCKED 262
Query: 295 VKDI 298
V ++
Sbjct: 263 VSEL 266
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFKYGVIVAVDSRASAGRYLASNDVNKVIE 107
>gi|218197607|gb|EEC80034.1| hypothetical protein OsI_21721 [Oryza sativa Indica Group]
Length = 277
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 81 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGAS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G++F VGSG
Sbjct: 141 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLMGSRFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR + EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 192 SLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDD 251
Query: 295 VKDIY 299
V +++
Sbjct: 252 VGELH 256
>gi|260947704|ref|XP_002618149.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
gi|238848021|gb|EEQ37485.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
Length = 282
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 96 VASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILGN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 156 LVYNYK--------GMGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG + LY + GW + +V DI+
Sbjct: 208 GVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSINLYHVTESGWVYHGNHNVGDIF 267
Query: 300 NDRKE 304
D KE
Sbjct: 268 YDIKE 272
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVNKVIR 106
>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 70
>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 259
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 260 VSKLIHRYREG 270
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 256
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 109/180 (60%), Gaps = 9/180 (5%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++P++ +++ T+AG AADC YWL +L++ + ++ +Y+ +T+ A+ +LVN + +
Sbjct: 83 TVMKILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYR 142
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ N LS G+++ YD GP ++ +DN G I G +F VGSG+ +A +LD
Sbjct: 143 YKGYN--------LSIGSMICGYDNT-GPHIFYIDNHGSRIAGKRFSVGSGSTHAYGVLD 193
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
T YR D+++EEA L AIYHA RD SGG V + I G + + DV D+++ K
Sbjct: 194 TCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVVHITQNGVEWIDKTDVFDMHDFSK 253
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 3 ITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
+ GTTTL F Y GI++A DSRAT I SQ + K
Sbjct: 51 VHGTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKI 87
>gi|71418280|ref|XP_810804.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70875393|gb|EAN88953.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 131 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 190
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 191 KILANITYSYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHELFSVGSG 241
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ GW Q+ D
Sbjct: 242 SIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGGWTQISRDD 301
Query: 295 VKDIYN 300
+Y+
Sbjct: 302 QTKLYD 307
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GIILA DSRA++ I SQ + K +
Sbjct: 110 GTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLE 146
>gi|448118643|ref|XP_004203552.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|448121061|ref|XP_004204135.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|359384420|emb|CCE79124.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
gi|359385003|emb|CCE78538.1| Piso0_001164 [Millerozyma farinosa CBS 7064]
Length = 285
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 96 VASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELRQKERISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP LY +D+ G I+G F VGSG +A
Sbjct: 156 LVYQYK--------GMGLSMGTMVCGYTKKEGPALYYVDSDGTRIKGDIFSVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ EEA L +I A RD SGG + LY + GW + +V DI+
Sbjct: 208 GVLDSEYKWDLTVEEALYLGKRSILAATHRDAFSGGSINLYHVTENGWIYHGNHNVGDIF 267
Query: 300 NDRKE 304
D KE
Sbjct: 268 WDIKE 272
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIVVAVDSRATAGNWVASQTVNKVIR 106
>gi|71033507|ref|XP_766395.1| proteasome subunit beta type 5 [Theileria parva strain Muguga]
gi|68353352|gb|EAN34112.1| proteasome subunit beta type 5, putative [Theileria parva]
Length = 266
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 18/196 (9%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP + +V +VI ++S +L T+AG AADC YW LAK C+ +E + + +++
Sbjct: 78 GPIVSTQSVS-----KVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQCRISVG 132
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N+ ++ GLS GT++A YD + GP LY + + G ++G F V
Sbjct: 133 AASQILANIFYYFK--------GYGLSAGTMIAGYD-LNGPGLYYVSSEGERVKGKLFSV 183
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A ++D YR D+S EEA L T AIY A RD SGG V LY ++ GW +++
Sbjct: 184 GSGSMFAYGVIDQGYRSDMSLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWTKLV 243
Query: 292 S-RDVKD---IYNDRK 303
RD+ + +Y D+K
Sbjct: 244 DRRDINELHYLYADKK 259
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + G+ILA DSRA+ ++ +Q ++K +
Sbjct: 52 FKKGTTTLGFIFDHGVILAVDSRASMGPIVSTQSVSKVIE 91
>gi|115394802|gb|ABI97195.1| HA2B [Sus scrofa]
Length = 276
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCHYWERLLAKECRLYYLRNGDRISLSAASKLLSNMMYHYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ +
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGH 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DL E AY L AI HA RD +SGG V +Y +N GW V S DV D+ + +EA
Sbjct: 216 RYDLIIEYAYDLGRRAIVHATHRDSYSGGVVNMYHMNEDGWVNVDSTDVSDLMHHYREA 274
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIE 108
>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 259
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 260 VSKLIHRYREG 270
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|219567026|dbj|BAH05031.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGQYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNQRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGQYLASNDVNKVIE 70
>gi|407849166|gb|EKG04000.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 131 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 190
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 191 KILANITYSYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHELFSVGSG 241
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ GW Q+ D
Sbjct: 242 SIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGGWTQISRDD 301
Query: 295 VKDIYN 300
+Y+
Sbjct: 302 QTKLYD 307
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GIILA DSRA++ I SQ + K +
Sbjct: 110 GTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLE 146
>gi|159124282|gb|EDP49400.1| proteasome component Pre2, putative [Aspergillus fumigatus A1163]
Length = 296
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLS 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|215701183|dbj|BAG92607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 28 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGAS 87
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G++F VGSG
Sbjct: 88 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLMGSRFSVGSG 138
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ILD YR + EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 139 SLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDD 198
Query: 295 VKDIY 299
V +++
Sbjct: 199 VGELH 203
>gi|50288021|ref|XP_446439.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525747|emb|CAG59366.1| unnamed protein product [Candida glabrata]
Length = 286
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E K + +++ A+ +L N
Sbjct: 100 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKERISVAAASKILGN 159
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 160 LVYQYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 211
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS EEA L +I A RD +SGG + LY + GW + DV ++
Sbjct: 212 GVLDSNYKWDLSVEEALYLGKRSILAAAHRDAYSGGSINLYHVTEDGWVYHGNHDVGQLF 271
Query: 300 NDRKE 304
+ KE
Sbjct: 272 WEIKE 276
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + SQ + K +
Sbjct: 74 GTTTLAFRFQGGIVVAVDSRATAGQWVASQTVKKVIE 110
>gi|51340809|gb|AAC97957.2| proteasome beta 5 subunit [Trypanosoma cruzi]
Length = 261
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +V+ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 81 SSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 140
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 141 KILANITYSYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHELFSVGSG 191
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ GW Q+ D
Sbjct: 192 SIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGGWTQISRDD 251
Query: 295 VKDIYN 300
+Y+
Sbjct: 252 QTKLYD 257
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GIILA DSRA++ I SQ + K +
Sbjct: 60 GTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLE 96
>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 272
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 259
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 260 VSKLIHRYREG 270
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 70
>gi|348541149|ref|XP_003458049.1| PREDICTED: proteasome subunit beta type-8-like [Oreochromis
niloticus]
Length = 275
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 123 NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+
Sbjct: 100 NDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMML 159
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
YR GLS G+++ +D+ GP LY +D+ G + G F G G YA ++
Sbjct: 160 GYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVV 210
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
D+ YR D++ EEAY L I HA RD +SGG V +Y + GW +V DV ++
Sbjct: 211 DSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNMYHMQEDGWIKVCKEDVSEL 266
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGRYLASNDVNKVIE 107
>gi|317032170|ref|XP_001394180.2| proteasome component PRE2 [Aspergillus niger CBS 513.88]
gi|350631028|gb|EHA19399.1| hypothetical protein ASPNIDRAFT_52883 [Aspergillus niger ATCC 1015]
Length = 296
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFNDMNPIFWKTK 283
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|255948078|ref|XP_002564806.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591823|emb|CAP98078.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 296
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKKTNEPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +Y+ +L+EEEA L AI A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ D K
Sbjct: 266 GWVHHGFDDMNPIFWDTK 283
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ TDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVS 106
>gi|367012307|ref|XP_003680654.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
gi|359748313|emb|CCE91443.1| hypothetical protein TDEL_0C05540 [Torulaspora delbrueckii]
Length = 287
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+ +L
Sbjct: 99 SWIASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGAQCRLHELKEKERISVAAASKIL 158
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +
Sbjct: 159 SNLVYQYKGA--------GLSMGTMICGYTKKEGPTVYYVDSDGTRLKGDLFCVGSGQTF 210
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD +Y+ +L EEA L +I A RD +SGG V LY + GW + D+ +
Sbjct: 211 AYGVLDANYKWELGVEEALELGKRSILAATHRDAYSGGSVNLYHVTEDGWVYHGNHDINE 270
Query: 298 IYNDRKE 304
++ + KE
Sbjct: 271 LFWETKE 277
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA I SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGSWIASQTVKKVIE 111
>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 70
>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
Length = 272
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 259
Query: 295 VKDIYNDRKE 304
V + + +E
Sbjct: 260 VSKLIHRYRE 269
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|71416085|ref|XP_810086.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70874567|gb|EAN88235.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T +++ ++ +L T+AG AADC YW L EC+ +E + +++ A+
Sbjct: 131 SSGQYISSQTVMKILEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRISVAAAS 190
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+ YR GLS GT++A +D+ GP LY +D+ G ++ F VGSG
Sbjct: 191 KILANITYSYRN--------YGLSMGTMVAGWDQ-FGPSLYYVDDKGTRVKHELFSVGSG 241
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD YR +L+ EEA LA +I+HA RD SGG V +Y ++ GW Q+ D
Sbjct: 242 SIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGGWTQISRDD 301
Query: 295 VKDIYN 300
+Y+
Sbjct: 302 QTKLYD 307
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GIILA DSRA++ I SQ + K +
Sbjct: 110 GTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKILE 146
>gi|121699289|ref|XP_001267971.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
gi|119396113|gb|EAW06545.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
Length = 296
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKKQNAPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYSYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALQLGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|115398830|ref|XP_001215004.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
gi|114191887|gb|EAU33587.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
Length = 296
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKPTDAPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFNDMNPIFWKTK 283
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|219567058|dbj|BAH05047.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 243
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 60 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 119
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 120 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 170
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 171 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 230
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 231 VSDLIHRYREG 241
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 39 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 75
>gi|332823719|ref|XP_003311252.1| PREDICTED: proteasome subunit beta type-8 [Pan troglodytes]
Length = 160
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 1 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 53 MGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 112 GRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 158
>gi|402225220|gb|EJU05281.1| proteasome-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 315
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L EC+ +E + R +++ A+ L
Sbjct: 107 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIECRLHELRNRERISVAAASKFL 166
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ Y
Sbjct: 167 SNLVYSYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGTRLKGDIFSVGSGSTY 217
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y DLS+E+A L +IY A RD +SG + LY + QGW+ + + DV
Sbjct: 218 AYGVLDQGYHWDLSDEDAQELGRRSIYAAGHRDAYSGNTINLYHVKEQGWEFLGNYDVTK 277
Query: 298 IYNDRKEAPPG 308
++ D PG
Sbjct: 278 MHYDGPGNVPG 288
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 83 GTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKKVIE 119
>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|358392916|gb|EHK42320.1| hypothetical protein TRIATDRAFT_135900 [Trichoderma atroviride IMI
206040]
Length = 285
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 156 LIYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL++EEA L +I A RD +SGG + LY + GW + D I+
Sbjct: 208 GVLDSEYKYDLTDEEALELGKRSILAATHRDAYSGGYINLYHVKEAGWVKHGFMDTNPIF 267
Query: 300 NDRK 303
K
Sbjct: 268 WQTK 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|119469453|ref|XP_001257946.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
gi|119406098|gb|EAW16049.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
Length = 296
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 272
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLDSNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 259
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 260 VSKLIHRYREG 270
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLDSNDANKVIE 104
>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
Length = 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|391339227|ref|XP_003743953.1| PREDICTED: proteasome subunit beta type-5-like [Metaseiulus
occidentalis]
Length = 280
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 14/195 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S TV ++I V+S +L T+AG AADC YWL L++ C+ YE + + +++
Sbjct: 96 GSFIGSGTVK-----KIIVVNSYVLGTMAGGAADCSYWLRVLSERCRLYELRNKEPISVA 150
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L NM+ Y+ GLS G ++ +D+ GP LY +D+ G + G F
Sbjct: 151 AASKLFSNMLYSYKG--------MGLSLGVMLMGFDK-RGPALYYVDDEGNRLSGQMFSA 201
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A +LD+ Y+ DL +E+AY L AI A RD +SGG VR Y + GW V
Sbjct: 202 GSGSPNALGVLDSGYKWDLEDEDAYELGRRAITAATFRDSYSGGIVRCYHLKPDGWVHVG 261
Query: 292 SRDVKDIYNDRKEAP 306
D +Y AP
Sbjct: 262 DEDCMVLYEKYNGAP 276
>gi|388857139|emb|CCF49354.1| probable PRE2-20S core proteasome subunit (beta5) [Ustilago hordei]
Length = 325
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ L
Sbjct: 94 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYL 153
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 154 SNLVYSYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGTRLKGDVFSVGSGSTF 204
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS+EEA L +IY A RD +SG V LY + GW+ + + DV
Sbjct: 205 AYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSK 264
Query: 298 IY----NDRKEAPPGGG 310
++ D PGGG
Sbjct: 265 LHYDGPGDNVPGAPGGG 281
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ DSRATA I S + K +
Sbjct: 70 GTTTLAFRFKGGIIVCVDSRATAGSYIASGTVKKVIE 106
>gi|209733970|gb|ACI67854.1| Proteasome subunit beta type-8 precursor [Salmo salar]
Length = 267
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+
Sbjct: 84 SAGSYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAAS 143
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D GP LY +D+ + G F G G
Sbjct: 144 KLLCNMMLGYR--------GMGLSMGSMIVGWDN-KGPGLYYVDDNATRLSGRMFSTGCG 194
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA ++D+ YR D++ EEAY L I A RD +SGG V LY + GW +V D
Sbjct: 195 SSYAYGVIDSGYREDMTVEEAYELGRRGITLATHRDAYSGGVVNLYHMQEDGWIKVCKED 254
Query: 295 VKDI 298
V ++
Sbjct: 255 VSEL 258
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + G+I+A DSRA+A I S++ NK +
Sbjct: 63 GTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIE 99
>gi|38047537|gb|AAR09671.1| similar to Drosophila melanogaster Prosbeta5, partial [Drosophila
yakuba]
Length = 161
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +Y+
Sbjct: 1 INQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYK----- 55
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
GLS G ++A +D+ GP LY +D+ G G F VGSG+ YA +LD+ Y DL
Sbjct: 56 ---GMGLSMGMMLAGFDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDL 111
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+EEA L AIYHA RD +SGG +R+Y I GW + + D +++
Sbjct: 112 EDEEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELH 160
>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|70991743|ref|XP_750720.1| proteasome component Pre2 [Aspergillus fumigatus Af293]
gi|66848353|gb|EAL88682.1| proteasome component Pre2, putative [Aspergillus fumigatus Af293]
Length = 296
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKKQDTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLS 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGCRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|255725326|ref|XP_002547592.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
gi|240135483|gb|EER35037.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
Length = 284
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 98 IASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSN 157
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 158 LVYQYK--------GMGLSMGTMVCGHTAKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAY 209
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+Y+ DL+ EEA L +I A RD +SGG + LY + QGW + +V D++
Sbjct: 210 GVLDTEYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVTEQGWTYHGNYNVGDLF 269
Query: 300 NDRKE 304
+ KE
Sbjct: 270 WEIKE 274
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 72 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 108
>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG + +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSINMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFRFRHGVIVAVDSRASAGKYLASNDVNKVIE 70
>gi|453085000|gb|EMF13044.1| proteasome subunit beta type-5 precursor [Mycosphaerella populorum
SO2202]
Length = 284
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S++L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSALLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYSYKG--------MGLSMGTMCAGVTPTEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DL ++EA L +I A RD SGG + LY + +GW + D I+
Sbjct: 207 GVLDAEYKYDLEDDEALELGKRSILAATHRDAFSGGFINLYHVKEEGWVKHGFMDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|402866608|ref|XP_003897471.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Papio anubis]
Length = 252
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ DC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 94 AGSYIDCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRG--------MGLSM 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 205 RRAIAHATHRDSYSGGIVNMYHMKEDGWVKVESTDVSDLLHQYREA 250
>gi|156849167|ref|XP_001647464.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
gi|156118150|gb|EDO19606.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
Length = 288
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E K ++ +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKSRISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ +EA L +I A RD +SGG + LY + GW + DV ++
Sbjct: 213 GVLDSNYKWDLTVDEALYLGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHDVGAVF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEVKE 277
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|148229628|ref|NP_001080028.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|37589390|gb|AAH59335.1| MGC69086 protein [Xenopus laevis]
Length = 271
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC +W LAKEC+ Y+ + + +++ A+
Sbjct: 87 SAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNSRISVSSAS 146
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ +YR +GLS G+++ +D+ GP LY +D+ G + G F GSG
Sbjct: 147 KLLCNMMLQYRG--------SGLSVGSMICGWDK-KGPGLYYVDDNGTRLCGDIFSTGSG 197
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DL+ EEAY L AI +A RD +SGG V +Y + GW +V D
Sbjct: 198 NSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDNYSGGVVNMYHMKEDGWVKVGEFD 257
Query: 295 VKDI 298
V ++
Sbjct: 258 VSEL 261
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S K NK +
Sbjct: 66 GTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIE 102
>gi|156062346|ref|XP_001597095.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980]
gi|154696625|gb|EDN96363.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 282
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYRYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y DLSEE A L +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYSYDLSEEAALELGKRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 264
Query: 300 NDRK 303
K
Sbjct: 265 WKTK 268
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|219567030|dbj|BAH05033.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 275
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 263 VSDLIHRYREG 273
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|297684734|ref|XP_002819976.1| PREDICTED: proteasome subunit beta type-5-like [Pongo abelii]
Length = 270
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 16/195 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP-------QLYMLDNTGLLIEGTKFCVG 232
MV +Y+ GLS GT++ +D+ GP LY +D+ G I G F VG
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPVGWATWQGLYYVDSEGNRISGATFSVG 195
Query: 233 SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
SG+ YA ++D Y DL ++ Y LA AIY A RD +SGG V LY + GW +V S
Sbjct: 196 SGSVYAYGVMDWGYSYDLEVDQPYDLAPRAIYQATYRDAYSGGAVNLYHVREDGWIRVSS 255
Query: 293 RDVKDIYNDRKEAPP 307
+V D++ + P
Sbjct: 256 DNVADLHEKYSGSTP 270
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|67526949|ref|XP_661536.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|40740051|gb|EAA59241.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|259481493|tpe|CBF75064.1| TPA: proteasome component Pre2, putative (AFU_orthologue;
AFUA_6G08310) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKPGSAPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------YGLSMGTMLAGVTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ TDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVS 106
>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NSYAYGVVDSGYKEDMTVEEAYELGCRGITHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 226 VSELIHRYREG 236
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 70
>gi|224473800|gb|ACN49144.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 275
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 263 VSDLIHRYREG 273
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|971309|dbj|BAA07954.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
Length = 271
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC +W LAKEC+ Y+ + + +++ A+
Sbjct: 87 SAGSYIASLKANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYQLRNNSRISVSSAS 146
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ +YR +GLS G+++ +D+ GP LY +D+ G + G F GSG
Sbjct: 147 KLLCNMMLQYRG--------SGLSVGSMICGWDK-KGPGLYYVDDNGTRLCGDIFSTGSG 197
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ YR DL+ EEAY L AI +A RD +SGG V +Y + GW +V D
Sbjct: 198 NSYAYGVMDSGYRFDLTPEEAYDLGRHAISYATHRDNYSGGVVNMYHMKEDGWVKVGEFD 257
Query: 295 VKDI 298
V ++
Sbjct: 258 VSEL 261
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I S K NK +
Sbjct: 66 GTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIE 102
>gi|315518883|dbj|BAJ51774.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 70
>gi|302414704|ref|XP_003005184.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
gi|261356253|gb|EEY18681.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
gi|346979440|gb|EGY22892.1| proteasome component PRE2 [Verticillium dahliae VdLs.17]
Length = 286
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 97 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 156
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 157 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 208
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ +LS+EEA L +I A RD +SGG + LY + GW + D I+
Sbjct: 209 GVLDAEYKYELSDEEALELGRRSILAATHRDAYSGGFINLYHVKEAGWVKHGFSDTNPIF 268
Query: 300 NDRK 303
K
Sbjct: 269 WKTK 272
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 71 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 107
>gi|154297340|ref|XP_001549097.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347835839|emb|CCD50411.1| similar to proteasome component Pre2 [Botryotinia fuckeliana]
Length = 282
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 93 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 152
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 153 LVYRYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAY 204
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y DLSEE A L +I A RD +SGG + LY + GW + D I+
Sbjct: 205 GVLDAEYSYDLSEEAALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 264
Query: 300 NDRK 303
K
Sbjct: 265 WKTK 268
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 67 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 103
>gi|169769717|ref|XP_001819328.1| proteasome component PRE2 [Aspergillus oryzae RIB40]
gi|238487964|ref|XP_002375220.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
gi|83767187|dbj|BAE57326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700099|gb|EED56438.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
Length = 296
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLSRGEDKANNAPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 266 GWVHHGFDDMNPIFWKTK 283
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|219567044|dbj|BAH05040.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 55 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ Y+ GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYK--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V D+ + +E
Sbjct: 226 VSDLIHRYREG 236
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRA+A + + S +NK +
Sbjct: 34 GTTTLAFRFRHGVIVAVDSRASAGNYLASNDVNKVIE 70
>gi|6249512|emb|CAB60065.1| lmp7 [Mus musculus]
Length = 275
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 10/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI +A RD +SGG V Y + GW +V S DV D+ EA
Sbjct: 216 RQDLSPEEAYDLGRRAIAYATHRDNYSGGVVN-YHMKEDGWVKVESSDVSDLLYKYGEA 273
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA I S ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIE 108
>gi|323346321|gb|EGA80611.1| Pre2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 287
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILXN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKXKE 277
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|391863500|gb|EIT72808.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Aspergillus oryzae 3.042]
Length = 245
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L+++C +E +++
Sbjct: 43 IASQTVKKVIPVSRLSRGEDKANNAPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHK 102
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G +
Sbjct: 103 RRITVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLP 154
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +
Sbjct: 155 GNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 214
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D+ I+ K
Sbjct: 215 GWVHHGFDDMNPIFWKTK 232
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 17 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 55
>gi|303390486|ref|XP_003073474.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
gi|303302620|gb|ADM12114.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
Length = 229
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GP+ S TV +VI ++ ++L T+AG AADC YW + K YE +T+
Sbjct: 54 GPYIASQTVK-----KVIEINKNLLGTMAGGAADCFYWEKLVGLYAKNYELTNGRRITVS 108
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ L N V KY+ GLS GT++ YD P ++ +D+ G I+G F V
Sbjct: 109 AASMYLSNCVYKYK--------GYGLSMGTMLCGYDG-SEPCIFYVDDAGKRIKGNLFSV 159
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A IL + YR D+S+EEA L AI+HA RD SGG + LY +N +GW +V
Sbjct: 160 GSGSTIAYGILSSCYRFDMSKEEALNLGKEAIFHAAHRDAFSGGFINLYYMNEEGWTKVG 219
Query: 292 SRDVKDI 298
S DV D
Sbjct: 220 SYDVNDF 226
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRAT+ I SQ + K +
Sbjct: 31 GTTTLAFVFKEGMVIAVDSRATSGPYIASQTVKKVIE 67
>gi|384485679|gb|EIE77859.1| proteasome component PRE2 [Rhizopus delemar RA 99-880]
Length = 277
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L + C+ +E + + +++ A+ LL N
Sbjct: 95 ISSQTVKKVIEINPYLLGTMAGGAADCQYWERELGRRCRLHELRNKERISVAAASKLLAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +A
Sbjct: 155 MVYSYKG--------MGLSMGTMVTGWDKT-GPNLFYVDSDGSRLKGDIFSVGSGSTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD+ Y DLS ++A L +IYHA RD SGG V LY + GW + DV +++
Sbjct: 206 GVLDSGYNYDLSVKDALELGRRSIYHATHRDAMSGGSVNLYHVTENGWDYHGNHDVGELH 265
Query: 300 NDRKEAPPGG 309
+ ++ G
Sbjct: 266 WEYQDENAKG 275
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+++A DSRAT + I SQ + K +
Sbjct: 69 GTTTLAFQFQGGVVVAVDSRATMGNYISSQTVKKVIE 105
>gi|219567012|dbj|BAH05024.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGNRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|452840694|gb|EME42632.1| hypothetical protein DOTSEDRAFT_73463 [Dothistroma septosporum
NZE10]
Length = 284
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S++L T+AG AADC YWL L +C+ +E +++ +T+ A+ +L N
Sbjct: 95 IASQTVKKVIEINSALLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRITVCAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYSYKG--------MGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DL +EEA L +I A RD SGG + LY + GW + D I+
Sbjct: 207 GVLDAEYKYDLEDEEALELGRRSILAATHRDAFSGGYINLYHVKEAGWVKHGFNDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|402078002|gb|EJT73351.1| proteasome component PRE2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 284
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYQYKG--------MGLSMGTMCAGVTKEEGPALYYIDSDGTRLSGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y +LS+E+A L +I A RD +SGG + LY + +GW + D I+
Sbjct: 207 GVLDAEYNYELSDEDALELGRRSILAATHRDAYSGGFINLYHVKEEGWVRHGFNDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFRGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|384497219|gb|EIE87710.1| proteasome component PRE2 [Rhizopus delemar RA 99-880]
Length = 187
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 14/198 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G + S TV +VI ++ +L T+AG AADC YW L + C+ +E + + +++
Sbjct: 2 GNYISSQTVK-----KVIEINPYLLGTMAGGAADCQYWERELGRRCRLHELRNKERISVA 56
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ LL NMV Y+ GLS GT++ +D+ GP L+ +D+ G ++G F V
Sbjct: 57 AASKLLANMVYSYK--------GMGLSMGTMVTGWDKT-GPNLFYVDSDGSRLKGDIFSV 107
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ +A +LD+ Y DLS ++A L +IYHA RD SGG V LY + GW
Sbjct: 108 GSGSTFAYGVLDSGYDYDLSVKDALELGRRSIYHATHRDAMSGGSVNLYHVTENGWDYHG 167
Query: 292 SRDVKDIYNDRKEAPPGG 309
+ DV +++ + ++ G
Sbjct: 168 NHDVGELHWEYQDENAKG 185
>gi|386868057|dbj|BAM15298.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 194
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 98/161 (60%), Gaps = 9/161 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T++G+AADCVYW LAK+C+ Y+ + + +++ A+
Sbjct: 43 SAGSYIDTQTFKKVIEINPYLLGTMSGSAADCVYWERMLAKQCRIYKLRNKKRISVSAAS 102
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV +Y+ GLS GT++ +D+ GP LY + G+ + G F GSG
Sbjct: 103 KLLANMVSEYK--------GMGLSMGTMICGWDD-KGPGLYYVSGNGVRLAGNMFSTGSG 153
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ YA ++D+ Y+ DLS +EAY LA AIYHA RD +SGG
Sbjct: 154 SLYAYGVMDSGYKYDLSVQEAYNLAQHAIYHATHRDAYSGG 194
>gi|315518885|dbj|BAJ51775.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|315518889|dbj|BAJ51777.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 55 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP L+ +D+ G + G F G G
Sbjct: 115 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLFYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 226 VSKLIHRYREG 236
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 70
>gi|194758026|ref|XP_001961263.1| GF13778 [Drosophila ananassae]
gi|190622561|gb|EDV38085.1| GF13778 [Drosophila ananassae]
Length = 284
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 9/181 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW L+KEC+ +E + + +++ A+ ++ N+ +
Sbjct: 103 TMKKIVEINQFLLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHE 162
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ GLS G ++A YD+ GP LY +D+ G G F VGSG+ +A +LD
Sbjct: 163 YKG--------MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGSGSLFAYGVLD 213
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
+ Y DL ++ A L AIYHA RD +SGG +R+Y + GW ++ D +++ +
Sbjct: 214 SGYHWDLEDDVAQELGRRAIYHATFRDAYSGGIIRVYHMTPTGWIKISETDCMELHYKYE 273
Query: 304 E 304
E
Sbjct: 274 E 274
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF+Y G+ILA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFKYKGGVILAVDSRATGGQYIGSQTMKKIVE 109
>gi|209732606|gb|ACI67172.1| Proteasome subunit beta type-5 precursor [Salmo salar]
gi|303661532|gb|ADM16042.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 89 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRVYELRNKERISVAAASKLL 148
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 149 ANMVYQYK--------GMGLSMGTMVCGWDKT-GPGLYYVDSEGNRVCGDLFAVGSGSMY 199
Query: 238 AQAILDTDYR-PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A I+D+ + DL+ EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 200 AYGIVDSGLKQKDLTMEEACDLGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQSDV 258
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 101
>gi|198285521|gb|ACH85299.1| proteasome (prosome, macropain) subunit beta type 5 [Salmo salar]
Length = 269
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 88 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRVYELRNKERISVAAASKLL 147
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 148 ANMVYQYK--------GMGLSMGTMVCGWDKT-GPGLYYVDSEGNRVCGDLFAVGSGSMY 198
Query: 238 AQAILDTDYR-PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A I+D+ + DL+ EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 199 AYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQSDV 257
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 61 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 100
>gi|221220708|gb|ACM09015.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ SS + T +VI ++ +L T+AG AADC +W LA++C YE + + +++ A+
Sbjct: 86 TASSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCHVYELRNKERISVAAAS 145
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG
Sbjct: 146 KLLANMVYQYK--------GMGLSMGTMVCGWDKT-GPGLYYVDSEGNRVCGDLFAVGSG 196
Query: 235 AEYAQAILDTDYR-PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+ YA I+D+ + DL+ EEA L AIY A RD +SGG V LY ++ +GW +V
Sbjct: 197 SMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQS 256
Query: 294 DV 295
DV
Sbjct: 257 DV 258
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA+ I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATASSYIASQTVKKVIE 101
>gi|365757898|gb|EHM99769.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L TLAG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTLAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD SGG V LY + GW + D+ +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDIGELF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|221219204|gb|ACM08263.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 89 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRVYELRNKERISVAAASKLL 148
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 149 ANMVYQYK--------GMGLSMGTMVCGWDKT-GPGLYYVDSEGNRVCGDLFAVGSGSMY 199
Query: 238 AQAILDTDYR-PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A I+D+ + DL+ EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 200 AYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQSDV 258
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 101
>gi|401840711|gb|EJT43416.1| PRE2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L TLAG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTLAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD SGG V LY + GW + D+ +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDIGELF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|366988633|ref|XP_003674083.1| hypothetical protein NCAS_0A11440 [Naumovozyma castellii CBS 4309]
gi|342299946|emb|CCC67702.1| hypothetical protein NCAS_0A11440 [Naumovozyma castellii CBS 4309]
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E K + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELKEKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+Y+ DL+ E+A L +I A RD +SGG + LY + GW + DV +
Sbjct: 213 GVLDTNYKWDLTVEDALYLGKRSILAAAHRDAYSGGSINLYHVTESGWIYHGNHDVGQTF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC +W LAKEC+ Y+ + +++ A+
Sbjct: 55 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQHWERLLAKECRLYKLRNNQRISVAAAS 114
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 115 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 165
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 166 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 225
Query: 295 VKDIYNDRKEA 305
V + + +E
Sbjct: 226 VSKLIHRYREG 236
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 34 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 70
>gi|241951736|ref|XP_002418590.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative;
proteinase ysce subunit, putative [Candida dubliniensis
CD36]
gi|223641929|emb|CAX43893.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 285
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 99 IASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 159 LVYQYKG--------MGLSMGTMICGHTAKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + QGW + +V D++
Sbjct: 211 GVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNLYHVTEQGWTYHGNFNVGDLF 270
Query: 300 NDRKE 304
+ KE
Sbjct: 271 WEVKE 275
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 73 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 109
>gi|221220194|gb|ACM08758.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL
Sbjct: 89 SYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRVYELRNKERISVAAASKLL 148
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ Y
Sbjct: 149 ANMVYQYK--------GMGLSMGTMVCGWDKT-GPGLYYVDSEGNRVCGDLFAVGSGSMY 199
Query: 238 AQAILDTDYR-PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A I+D+ + DL+ EEA L AIY A RD +SGG V LY ++ +GW +V DV
Sbjct: 200 AYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVNLYHVHSEGWTRVSQSDV 258
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 62 FLHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIE 101
>gi|430812678|emb|CCJ29922.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 269
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCV---------YWLHSLAKECKGYECKYRTGM 168
S + T +VI ++ +L T+AG AADC +W L EC+ YE +++T +
Sbjct: 73 SWIASQTVQKVIEINDYLLGTMAGGAADCQVGLQLSAVEFWETVLRMECRLYELRHKTRI 132
Query: 169 TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK 228
++ A+ +L N+V Y+ GLS GT++ +DE GP L+ +D+ G ++G
Sbjct: 133 SVAAASKILANIVYSYK--------GMGLSMGTMICGWDERRGPSLFYVDSEGTRLKGNM 184
Query: 229 FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
FCVGSG +A +I+D Y D+S E+A L AI A RD SGG V +Y I +GW+
Sbjct: 185 FCVGSGQTFAYSIVDDKYSWDMSVEDAIELGKRAILAATHRDAFSGGNVNIYHIRSEGWR 244
Query: 289 QVLSRDVKDIYNDRKE 304
DV ++++ E
Sbjct: 245 FCGRFDVAQLFDEVVE 260
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + GI++A DSRATA I SQ + K +
Sbjct: 49 GTTTLAFCFSGGILVAVDSRATAGSWIASQTVQKVIE 85
>gi|367006907|ref|XP_003688184.1| hypothetical protein TPHA_0M01750 [Tetrapisispora phaffii CBS 4417]
gi|357526491|emb|CCE65750.1| hypothetical protein TPHA_0M01750 [Tetrapisispora phaffii CBS 4417]
Length = 286
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC YW L +C+ +E K + +++ A+ +L N
Sbjct: 100 VASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGSQCRLHELKEKERISVAAASKILSN 159
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 160 LVYQYKGA--------GLSMGTMICGYTKKEGPTVYYVDSDGTRLKGNVFCVGSGQTFAY 211
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ +EA L +I A RD +SGG + LY + GW + DV +
Sbjct: 212 GVLDSNYKWDLTVDEALYLGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHDVGSTF 271
Query: 300 NDRKE 304
+ KE
Sbjct: 272 WEIKE 276
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ +NK +
Sbjct: 74 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVNKVIR 110
>gi|401623154|gb|EJS41261.1| pre2p [Saccharomyces arboricola H-6]
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAFSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|323302586|gb|EGA56393.1| Pre2p [Saccharomyces cerevisiae FostersB]
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKVKE 277
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|207340308|gb|EDZ68701.1| YPR103Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKVKE 277
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|6325360|ref|NP_015428.1| proteasome core particle subunit beta 5 [Saccharomyces cerevisiae
S288c]
gi|730375|sp|P30656.3|PSB5_YEAST RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain subunit PRE2; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE2;
AltName: Full=Proteasome component PRE2; AltName:
Full=Proteinase YSCE subunit PRE2; Flags: Precursor
gi|323462946|pdb|3NZJ|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462960|pdb|3NZJ|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462974|pdb|3NZW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462988|pdb|3NZW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463002|pdb|3NZX|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463016|pdb|3NZX|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|4221|emb|CAA48628.1| proteasome Pre2 subunit [Saccharomyces cerevisiae]
gi|914974|gb|AAB68073.1| Pre2p: Proteasome subunit [Saccharomyces cerevisiae]
gi|1041975|gb|AAB34630.1| Doa3, PRG1, PRE2=beta-type proteasome subunit LMP7 homolog/Hs-X
homolog [Saccharomyces cerevisiae, Peptide, 287 aa]
gi|151942879|gb|EDN61225.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190408030|gb|EDV11295.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|256269062|gb|EEU04399.1| Pre2p [Saccharomyces cerevisiae JAY291]
gi|285815625|tpg|DAA11517.1| TPA: proteasome core particle subunit beta 5 [Saccharomyces
cerevisiae S288c]
gi|323331341|gb|EGA72759.1| Pre2p [Saccharomyces cerevisiae AWRI796]
gi|323335173|gb|EGA76463.1| Pre2p [Saccharomyces cerevisiae Vin13]
gi|323350231|gb|EGA84378.1| Pre2p [Saccharomyces cerevisiae VL3]
gi|349581905|dbj|GAA27062.1| K7_Pre2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296106|gb|EIW07209.1| Pre2p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|742352|prf||2009376C proteasome:SUBUNIT=Pre2
Length = 287
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKVKE 277
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|172260|gb|AAA34906.1| proteosome-related protein [Saccharomyces cerevisiae]
Length = 288
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKVKE 277
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|396498929|ref|XP_003845348.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans
JN3]
gi|312221929|emb|CBY01869.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans
JN3]
Length = 283
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD Y+ DL ++EA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDASYKYDLEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
D K
Sbjct: 266 WDTK 269
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|195457144|ref|XP_002075445.1| GK18059 [Drosophila willistoni]
gi|194171530|gb|EDW86431.1| GK18059 [Drosophila willistoni]
Length = 311
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 12/191 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ N +++ ++ ++L T+AG A DC YW L +E + YE +++ + +R AA ++ N
Sbjct: 96 IGSNEMEKIVEINDNLLGTMAGCAGDCCYWDRVLMRESRLYELRFKRKLPVRAAARMICN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++R GLS G ++A + GPQL +D+ G + G+ F VGSG++ A
Sbjct: 156 TAFQFRG--------MGLSMGMMLAGWGPT-GPQLAYVDSDGERLYGSNFVVGSGSDAAM 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD---VK 296
+ D ++R D++ EEA+ LA A+Y+A DI++GG VR+Y I GW+++ D +
Sbjct: 207 GVFDFNFRFDMTNEEAFELAERALYYATYSDIYTGGFVRVYHITKTGWKKISCTDSVVLH 266
Query: 297 DIYNDRKEAPP 307
D + + PP
Sbjct: 267 DRFKTFDDQPP 277
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTLGF + GI+L DSRAT+ I S ++ K +
Sbjct: 70 GTTTLGFIFQGGIVLCADSRATSGIFIGSNEMEKIVE 106
>gi|219567034|dbj|BAH05035.1| proteasome subunit, beta type 8 [Oryzias hubbsi]
Length = 275
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ P LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYRG--------MGLSMGSMICGWDK-EAPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKE 304
V D+ + +E
Sbjct: 263 VSDLIHRYRE 272
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|315518860|dbj|BAJ51759.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWVKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|441594222|ref|XP_004087149.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Nomascus
leucogenys]
Length = 160
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 53 IGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 112 GRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 158
>gi|259150253|emb|CAY87056.1| Pre2p [Saccharomyces cerevisiae EC1118]
gi|365762571|gb|EHN04105.1| Pre2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 287
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKIKE 277
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 111
>gi|219567018|dbj|BAH05027.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWVKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|403071958|pdb|4B4T|5 Chain 5, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 287
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 213 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 272
Query: 300 NDRKE 304
KE
Sbjct: 273 WKVKE 277
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + + SQ + + +
Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIE 111
>gi|410931040|ref|XP_003978904.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 275
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++S +L T++G+AADC+YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 104 KVIEINSYLLGTMSGSAADCMYWERLLAKECRLYRLRNNHRISVAAASKLLANMMLGYR- 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G G F GSG YA A++D+
Sbjct: 163 -------GMGLSVGSMICGWDK-QGPGLYYVDENGNRFSGQMFSTGSGNSYAYAVVDSGL 214
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
R D++ EEAY L I +A RD +SGG V +Y + GW +V DV +
Sbjct: 215 REDMTVEEAYDLGRRGIVYATHRDAYSGGVVNMYHMMEDGWIKVCQDDVSQL 266
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I SQ K +
Sbjct: 71 GTTTLAFKFKHGVIVAVDSRASAGKYISSQDAKKVIE 107
>gi|219567020|dbj|BAH05028.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
gi|315518869|dbj|BAJ51765.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518878|dbj|BAJ51771.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 275
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|335345758|gb|AEH41459.1| proteasome component PRE2 [Endocarpon pusillum]
Length = 283
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGIQCRLHELRHKRRISVAAASKILSN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMITGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DL +EEA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDAEYKYDLEDEEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|301120664|ref|XP_002908059.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
gi|262103090|gb|EEY61142.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
Length = 288
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 16/239 (6%)
Query: 73 AETQQDHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSSTVPHNTSFQVI--- 129
A ++HF + Q + L +Y GG S+S+ P S QV
Sbjct: 58 AAYSREHFKVKYTEDNEQSLKFAKGTTTLAFIYNGGIVVAVDSRSTMGPFIASQQVKKVN 117
Query: 130 PVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNH 189
P++ IL TLAG AADC +W +LA +C+ YE + R +++R A+ L+ N Y+
Sbjct: 118 PINEYILATLAGGAADCQFWQRNLAVQCRMYELRNRHRISVRAASKLIANTCNYYKRYGM 177
Query: 190 SSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK----FCVGSGAEYAQAILDTD 245
S +M YD P LY +D+ G I +K F VGSG+ YA +LDT+
Sbjct: 178 SLG--------MMMMGYDN-GEPVLYYVDDEGSRIPASKDVPKFSVGSGSTYAYGVLDTN 228
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+R DL+++EA L AIYHA RD +SGG ++ +G++ V+ +DVK++++ +E
Sbjct: 229 WRWDLTDDEAVELGKRAIYHATHRDAYSGGFCNVFVFKPEGFKHVVHQDVKEMHDYGRE 287
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
F GTTTL F Y GI++A DSR+T I SQ++ K
Sbjct: 79 FAKGTTTLAFIYNGGIVVAVDSRSTMGPFIASQQVKK 115
>gi|448517091|ref|XP_003867707.1| Pre2 proteasome beta-5 subunit [Candida orthopsilosis Co 90-125]
gi|380352046|emb|CCG22270.1| Pre2 proteasome beta-5 subunit [Candida orthopsilosis]
Length = 282
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 96 IASQTVNKVIRINPQLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAAASKILSN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ + + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 156 LVYSYK--------GMGLSMGTMVCGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ +EA L +I A RD +SGG V LY +N +GW + +V D++
Sbjct: 208 GVLDSEYKWDLTVDEALYLGKRSILAATHRDAYSGGSVNLYHVNEEGWTYHGNYNVGDLF 267
Query: 300 NDRKE 304
+ KE
Sbjct: 268 WEVKE 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 106
>gi|451853015|gb|EMD66309.1| hypothetical protein COCSADRAFT_112600 [Cochliobolus sativus
ND90Pr]
gi|452002583|gb|EMD95041.1| hypothetical protein COCHEDRAFT_1191789 [Cochliobolus
heterostrophus C5]
Length = 283
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD Y+ DL ++EA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDAQYKYDLEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
+ K
Sbjct: 266 WETK 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|389748770|gb|EIM89947.1| N-terminal nucleophile aminohydrolase [Stereum hirsutum FP-91666
SS1]
Length = 312
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S V T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+
Sbjct: 103 TAGSYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAAS 162
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++A +D+ GP L+ +D+ G ++G F VGSG
Sbjct: 163 KYLSNLVYSYK--------GMGLSMGTMIAGWDKT-GPALFYVDSDGTRLKGDLFSVGSG 213
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD YR DL++EEA L +IY A RD SG LY + GW + + D
Sbjct: 214 STFAYGVLDQGYRWDLTDEEAQELGRRSIYAAGHRDAFSGNTNNLYHVKEDGWHFIGNYD 273
Query: 295 VKDIYNDRKEAPPGGGDH 312
+ ++ D PG H
Sbjct: 274 ISKMHYDGPGDVPGSAGH 291
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I++ DSRATA + S + K +
Sbjct: 82 GTTTLAFRFKGGVIVSVDSRATAGSYVASGTVKKVIE 118
>gi|340520194|gb|EGR50431.1| proteasome catalytic subunit 3 [Trichoderma reesei QM6a]
Length = 285
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 96 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 156 LIYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ ++S+EEA L +I A RD +SGG + LY + GW + D I+
Sbjct: 208 GVLDSEYKYEMSDEEALELGKRSILAATHRDAYSGGYINLYHVKEAGWVKHGFLDTNPIF 267
Query: 300 NDRK 303
K
Sbjct: 268 WKTK 271
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 70 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 106
>gi|50310861|ref|XP_455453.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644589|emb|CAG98161.1| KLLA0F08228p [Kluyveromyces lactis]
Length = 285
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 98 IASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 157
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 158 LVYEYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLQGDLFCVGSGQTFAY 209
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DLS EEA + +I A RD +SGG + LY + GW + +V ++
Sbjct: 210 GVLDANYRWDLSVEEALYIGKRSILAAAHRDAYSGGSINLYHVTENGWVYHGNHNVDTLF 269
Query: 300 NDRKE 304
+ KE
Sbjct: 270 WEIKE 274
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I SQ + K +
Sbjct: 72 GTTTLAFRFKGGIIVAVDSRATAGQWIASQTVKKVIE 108
>gi|444321162|ref|XP_004181237.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
gi|387514281|emb|CCH61718.1| hypothetical protein TBLA_0F01760 [Tetrapisispora blattae CBS 6284]
Length = 287
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 101 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 160
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 161 LVYQYKGA--------GLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 212
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ EEA L +I A RD +SGG + LY + GW + DV +
Sbjct: 213 GVLDSNYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVTENGWIYHGNHDVGSTF 272
Query: 300 NDRKE 304
+ KE
Sbjct: 273 WEIKE 277
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ + K +
Sbjct: 75 GTTTLAFRFKGGIVVAVDSRATAGNWVASQTVKKVIE 111
>gi|322707035|gb|EFY98614.1| proteasome component PRE2 precursor [Metarhizium anisopliae ARSEF
23]
Length = 283
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINSVLLGTMAGGAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+LD +Y DLS E+A L +I A RD +SGG + LY + +GW
Sbjct: 206 GVLDAEYNYDLSVEDALELGRRSILAATHRDAYSGGFINLYHVKEEGW 253
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|395832108|ref|XP_003789118.1| PREDICTED: proteasome subunit beta type-8 [Otolemur garnettii]
Length = 276
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY ++ G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVNENGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+L+ +EAY L AI HA RD +SGG V +Y + GW +V S DV D+ + EA
Sbjct: 216 LLNLTPQEAYDLGRRAIAHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYWEA 274
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGNYIDTLRVNKVIE 108
>gi|11514002|pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Core Particle
gi|11514016|pdb|1G0U|Y Chain Y, A Gated Channel Into The Proteasome Core Particle
gi|20150387|pdb|1JD2|K Chain K, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150394|pdb|1JD2|R Chain R, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279378|pdb|2F16|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279392|pdb|2F16|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032212|pdb|2FAK|K Chain K, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032226|pdb|2FAK|Y Chain Y, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490853|pdb|2GPL|K Chain K, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490867|pdb|2GPL|Y Chain Y, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847470|pdb|2ZCY|K Chain K, Yeast 20s Proteasome:syringolin A-Complex
gi|178847484|pdb|2ZCY|Y Chain Y, Yeast 20s Proteasome:syringolin A-Complex
gi|178847512|pdb|3BDM|K Chain K, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847526|pdb|3BDM|Y Chain Y, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016377|pdb|3D29|K Chain K, Proteasome Inhibition By Fellutamide B
gi|190016391|pdb|3D29|Y Chain Y, Proteasome Inhibition By Fellutamide B
gi|197725331|pdb|3E47|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725345|pdb|3E47|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939222|pdb|3DY3|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939236|pdb|3DY3|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939250|pdb|3DY4|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939264|pdb|3DY4|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828247|pdb|3GPJ|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828261|pdb|3GPJ|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588331|pdb|3GPT|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588345|pdb|3GPT|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588359|pdb|3GPW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588373|pdb|3GPW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588553|pdb|3HYE|K Chain K, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588567|pdb|3HYE|Y Chain Y, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689391|pdb|3MG4|K Chain K, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689405|pdb|3MG4|Y Chain Y, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361154|pdb|3MG0|K Chain K, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361168|pdb|3MG0|Y Chain Y, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361182|pdb|3MG6|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361196|pdb|3MG6|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361210|pdb|3MG7|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361224|pdb|3MG7|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361238|pdb|3MG8|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361252|pdb|3MG8|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892351|pdb|3OKJ|K Chain K, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892365|pdb|3OKJ|Y Chain Y, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780429|pdb|3OEU|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780443|pdb|3OEU|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780457|pdb|3OEV|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780471|pdb|3OEV|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610682|pdb|3TDD|K Chain K, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610696|pdb|3TDD|Y Chain Y, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545856|pdb|3SHJ|K Chain K, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545870|pdb|3SHJ|Y Chain Y, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|374977460|pdb|1G65|K Chain K, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|374977461|pdb|1G65|Y Chain Y, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|378792251|pdb|3UN4|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792265|pdb|3UN4|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792285|pdb|3UN8|K Chain K, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792299|pdb|3UN8|Y Chain Y, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980826|pdb|3SDI|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980840|pdb|3SDI|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980854|pdb|3SDK|K Chain K, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980868|pdb|3SDK|Y Chain Y, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550742|pdb|4GK7|K Chain K, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550756|pdb|4GK7|Y Chain Y, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072202|pdb|4G4S|L Chain L, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973870|pdb|4FZC|K Chain K, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973884|pdb|4FZC|Y Chain Y, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973898|pdb|4FZG|K Chain K, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973912|pdb|4FZG|Y Chain Y, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302349|pdb|4INR|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302363|pdb|4INR|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302377|pdb|4INT|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302391|pdb|4INT|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302405|pdb|4INU|K Chain K, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302419|pdb|4INU|Y Chain Y, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 212
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 26 VASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 85
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 86 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 137
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 138 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 197
Query: 300 NDRKE 304
KE
Sbjct: 198 WKVKE 202
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 6 TTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTTL FR+ GII+A DSRATA + + SQ + K +
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIE 36
>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
Length = 451
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ L
Sbjct: 51 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYL 110
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 111 SNLVYSYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGNRLKGDVFSVGSGSTF 161
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS+EEA L +IY A RD +SG V LY + GW+ + + DV
Sbjct: 162 AYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSK 221
Query: 298 IY----NDRKEAPPGGG 310
++ D PGGG
Sbjct: 222 LHYEGPGDNVPGAPGGG 238
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ DSRATA I S + K +
Sbjct: 27 GTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKKVIE 63
>gi|84998356|ref|XP_953899.1| 20S proteasome beta 5 subunit [Theileria annulata]
gi|65304897|emb|CAI73222.1| 20S proteasome beta 5 subunit, putative [Theileria annulata]
Length = 270
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 18/197 (9%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP + V +VI ++S +L T+AG AADC YW LAK C+ +E + + +++
Sbjct: 77 MGPIVSTQNVS-----KVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQCRISV 131
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L N+ ++ GLS GT++A YD + GP LY + + G ++G F
Sbjct: 132 GAASQILANIFYYFK--------GYGLSAGTMIAGYD-LNGPGLYYVSSEGERVKGKLFS 182
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ +A ++D YR +++ EEA L T AIY A RD SGG V LY ++ GW ++
Sbjct: 183 VGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWTKI 242
Query: 291 LS-RDVKD---IYNDRK 303
+ RD+ + +Y D+K
Sbjct: 243 VDRRDINELHYLYADKK 259
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + +G+ILA DSRA+ ++ +Q ++K +
Sbjct: 52 FKKGTTTLGFIFDQGVILAVDSRASMGPIVSTQNVSKVIE 91
>gi|343426308|emb|CBQ69839.1| probable PRE2-20S core proteasome subunit (beta5) [Sporisorium
reilianum SRZ2]
Length = 319
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ L
Sbjct: 88 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYL 147
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 148 SNLVYGYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGTRLKGDVFSVGSGSTF 198
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS++EA L +IY A RD +SG V LY + GW+ + + DV
Sbjct: 199 AYGVLDQGYKWDLSDQEAQELGRRSIYAAAHRDAYSGNTVNLYHVRENGWEFIANYDVSK 258
Query: 298 IY----NDRKEAPPGGG 310
++ D PGGG
Sbjct: 259 LHYDGPGDDVPGAPGGG 275
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ DSRATA I S + K +
Sbjct: 64 GTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKKVIE 100
>gi|354543681|emb|CCE40402.1| hypothetical protein CPAR2_104380 [Candida parapsilosis]
Length = 282
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 96 IASQTVNKVIRINPQLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAAASKILSN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ + + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 156 LVYSYK--------GMGLSMGTMVCGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DL+ +EA L +I A RD +SGG + LY +N +GW + +V D++
Sbjct: 208 GVLDSEYKWDLTVDEALYLGKRSILAATHRDAYSGGSINLYHVNEEGWTYHGNYNVGDLF 267
Query: 300 NDRKE 304
+ KE
Sbjct: 268 WEVKE 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 106
>gi|3114280|pdb|1RYP|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114294|pdb|1RYP|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|14488816|pdb|1FNT|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488830|pdb|1FNT|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765710|pdb|1Z7Q|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765724|pdb|1Z7Q|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|298508233|pdb|1VSY|L Chain L, Proteasome Activator Complex
gi|298508247|pdb|1VSY|Z Chain Z, Proteasome Activator Complex
gi|298508449|pdb|3L5Q|P Chain P, Proteasome Activator Complex
gi|298508463|pdb|3L5Q|2 Chain 2, Proteasome Activator Complex
Length = 212
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 26 VASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSN 85
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 86 LVYQYKGA--------GLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAY 137
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + GW + DV +++
Sbjct: 138 GVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELF 197
Query: 300 NDRKE 304
KE
Sbjct: 198 WKVKE 202
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 6 TTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TTTL FR+ GII+A DSRATA + + SQ + + +
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIE 36
>gi|219567022|dbj|BAH05029.1| proteasome subunit, beta type 8, partial [Oryzias sarasinorum]
Length = 275
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGKYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D G + G F G G
Sbjct: 152 KLLSNMMLGYR--------GMGLSIGSMICGWDK-EGPGLYYVDENGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA ++D+ Y D++ EEAY L I HA RD +SGG V +Y + GW +V D
Sbjct: 203 NGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKED 262
Query: 295 VKDIYNDRKEA 305
V ++ + +E
Sbjct: 263 VSELIHRYREG 273
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIE 107
>gi|407924605|gb|EKG17638.1| Peptidase T1A proteasome beta-subunit [Macrophomina phaseolina MS6]
Length = 283
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DLS+E+A L +I A RD SGG + LY + GW + D I+
Sbjct: 206 GVLDAEYKYDLSDEDALELGRRSILAATHRDAFSGGFINLYHVKEDGWVRHGFNDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WKTK 269
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|441594225|ref|XP_004087150.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Nomascus
leucogenys]
Length = 252
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ DC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 94 AGSYIDCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG--------MGLSI 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 205 RRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREA 250
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLH 52
GTTTL F++ G+I+A DSRA+A I Q + L C L +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDCQYWERL----LAKECRLYY 115
>gi|392595619|gb|EIW84942.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 314
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L C+ +E + R +++ A+ L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 166 SNLVYGYKG--------MGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDLFSVGSGSTF 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR D+S+EEA L +IY A RD SG V LY + +GWQ + + D+
Sbjct: 217 AYGVLDQGYRWDMSDEEAQELGRRSIYAAGHRDAFSGNTVNLYHVKEEGWQFIGNYDISQ 276
Query: 298 IYND 301
++ D
Sbjct: 277 LHYD 280
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFKGGVIVAVDSRATAGSYVASGTVKKVIE 118
>gi|68482384|ref|XP_714824.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|68482509|ref|XP_714764.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436357|gb|EAK95720.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436420|gb|EAK95782.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|238883580|gb|EEQ47218.1| proteasome component PRE2 precursor [Candida albicans WO-1]
Length = 285
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W L +C+ +E + + +++ A+ +L N
Sbjct: 99 IASQTVNKVIRINPFLLGTMAGGAADCQFWETWLGTQCRLHELREKERISVAAASKILSN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 159 LVYQYK--------GMGLSMGTMVCGHTAKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG V LY + QGW + +V D++
Sbjct: 211 GVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNLYHVTEQGWTYHGNFNVGDLF 270
Query: 300 NDRKE 304
+ KE
Sbjct: 271 WEVKE 275
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 73 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 109
>gi|212533187|ref|XP_002146750.1| proteasome component Pre2, putative [Talaromyces marneffei ATCC
18224]
gi|210072114|gb|EEA26203.1| proteasome component Pre2, putative [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 22/182 (12%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL LA++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLNMALDKNHNAPVPGLLGTMAGTAADCQYWLRYLAEQCTLHELRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y++ GL GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYSYKS--------MGLGMGTMLAGMTPQEGPALYYIDSDGTRLP 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DLS +EA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLSTDEALELGRRSILAATHRDAYSGGYINLYHVKEE 265
Query: 286 GW 287
GW
Sbjct: 266 GW 267
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|19173511|ref|NP_597314.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
gi|19171100|emb|CAD26490.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
gi|449328847|gb|AGE95123.1| 20S proteasome beta-type subunit component PRE2 [Encephalitozoon
cuniculi]
Length = 229
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ ++L T+AG AADC++W + + K YE +T+ A+
Sbjct: 52 TSGSYIASQTVNKVININKNLLGTMAGGAADCLFWENLMGLYAKNYELTNGRRITVAAAS 111
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N V +Y+ GLS GT++ YD GP +Y +D+ G + G+ F VGSG
Sbjct: 112 MYLSNCVYRYK--------GYGLSMGTMICGYDS-SGPSIYYVDDDGKRVSGSLFSVGSG 162
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A IL + YR D+ ++EA L AI+HA RD SGG + LY +N GW +V S D
Sbjct: 163 STIAYGILSSSYRFDMDKDEALNLGRDAIFHAAHRDAFSGGLINLYYMNEDGWTKVGSYD 222
Query: 295 VKDI 298
V +
Sbjct: 223 VNEF 226
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
GTTTL F + EG+++A DSRAT+ I SQ +NK
Sbjct: 31 GTTTLAFIFKEGMVIAVDSRATSGSYIASQTVNK 64
>gi|189192022|ref|XP_001932350.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973956|gb|EDU41455.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 283
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD Y+ +L ++EA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDASYKYELEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
D K
Sbjct: 266 WDTK 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|339521933|gb|AEJ84131.1| proteasome subunit beta type-8 [Capra hircus]
Length = 276
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ + T++G AADC YW LAKEC+ + + +++ A+ LL +M+ +YR+
Sbjct: 105 KVIEINPHLHGTMSGCAADCQYWERLLAKECRLHYLRNGERVSVSAASKLLSHMMCQYRS 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G+ F GSG +A ++D+
Sbjct: 165 --------MGLSMGSMICGWDQK-GPGLYYVDHNGTRLSGSMFSTGSGNSHAYGVMDSGK 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
R DLS EEAY L AI HA RD +SGG V +Y + W +V S DV D+ + +EA
Sbjct: 216 RRDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDDWVKVESTDVSDLMHQYREA 274
>gi|149245104|ref|XP_001527086.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449480|gb|EDK43736.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 282
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 96 IASQTVNKVIRINPMLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSN 155
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ + + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 156 LVYSYK--------GMGLSMGTMICGHTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 207
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD+ Y+ DL+ EEA L +I A RD +SGG + LY +N +GW + +V +++
Sbjct: 208 GVLDSQYKWDLTVEEALYLGKRSILAATHRDAYSGGSINLYHVNEEGWTYHGNFNVGELF 267
Query: 300 NDRKE 304
+ KE
Sbjct: 268 WEVKE 272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 70 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIR 106
>gi|426352665|ref|XP_004043830.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Gorilla
gorilla gorilla]
Length = 160
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G+++ +D+ GP LY +D G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 53 MGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +E
Sbjct: 112 GRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREG 158
>gi|452981276|gb|EME81036.1| hypothetical protein MYCFIDRAFT_55997 [Pseudocercospora fijiensis
CIRAD86]
Length = 284
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYSYKG--------MGLSMGTMCAGVTPSEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y+ DL +E+A L +I A RD SGG + LY + GW + D I+
Sbjct: 207 GVLDAEYKYDLEDEDALELGRRSILAATHRDAFSGGYINLYHVKEDGWVKHGFNDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|219567038|dbj|BAH05037.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 232
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 123 NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+ LL NM+
Sbjct: 57 NDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNMML 116
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
Y+ GLS G+++ +D+ GP L+ +D+ G + G F G G YA ++
Sbjct: 117 GYK--------GMGLSMGSMICGWDK-EGPGLFYVDSNGTRLSGRMFSTGCGNSYAYGVV 167
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDR 302
D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V DV + +
Sbjct: 168 DSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVSKLIHRY 227
Query: 303 KEA 305
+E
Sbjct: 228 REG 230
>gi|147225185|emb|CAN13317.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 252
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ DC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 94 AGSYIDCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRG--------MGLSM 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY +D G + G F GSG YA ++D+ +R DLS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI HA RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 205 RRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREA 250
>gi|50546901|ref|XP_500920.1| YALI0B15224p [Yarrowia lipolytica]
gi|49646786|emb|CAG83171.1| YALI0B15224p [Yarrowia lipolytica CLIB122]
Length = 286
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI ++ +L T+AG AADC YW L +C+ YE + + +++ A+ +L N
Sbjct: 94 VASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGGQCRLYELREKQRISVAAASKILSN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMVCGYTAREGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+LD Y+ DL+ EEA AL +I A RD SGG V LY + +GW
Sbjct: 206 GVLDATYKWDLTVEEALALGKRSILAATHRDAFSGGSVNLYHVTEEGW 253
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + + SQ +NK +
Sbjct: 68 GTTTLAFRFKGGIVVAVDSRATAGNWVASQTVNKVIR 104
>gi|146414580|ref|XP_001483260.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
gi|146391733|gb|EDK39891.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
Length = 281
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 95 IASQTVNKVIRINPMLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILSN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 155 LIYEYK--------GMGLSMGTMICGYTKKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
++D + D+S E+A L I A RD +SGG + LY + QGW + +V DI+
Sbjct: 207 GVVDAGLKWDMSVEDALYLGKRGILAATHRDAYSGGSINLYHVTEQGWVYHGNHNVGDIF 266
Query: 300 NDRKE 304
D KE
Sbjct: 267 WDIKE 271
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ +NK +
Sbjct: 69 GTTTLAFRFKGGIIVAVDSRATAGNWIASQTVNKVIR 105
>gi|401827540|ref|XP_003887862.1| type-5 proteasome subunit beta [Encephalitozoon hellem ATCC 50504]
gi|392998869|gb|AFM98881.1| type-5 proteasome subunit beta [Encephalitozoon hellem ATCC 50504]
Length = 229
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ ++L T+AG AADC +W + K YE +T A+
Sbjct: 52 TSGSYIASQTVNKVIEINRNLLGTMAGGAADCFFWEKLMGLYAKNYELTNGRRITAAAAS 111
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N V +Y+ GLS GT++ YD + P +Y +D+ G I+G F VGSG
Sbjct: 112 MYLSNCVYRYK--------GYGLSMGTMICGYDGSM-PSIYYVDDDGRRIKGNLFSVGSG 162
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A IL + YR D+ +EEA LA AI+HA RD +SGG + LY ++ GW +V S D
Sbjct: 163 STIAYGILSSSYRFDMDKEEALELAKRAIFHAAHRDAYSGGSINLYYMDESGWVKVGSYD 222
Query: 295 VKDI 298
V D
Sbjct: 223 VDDF 226
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+ +A DSRAT+ I SQ +NK +
Sbjct: 31 GTTTLAFVFREGMAIAVDSRATSGSYIASQTVNKVIE 67
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
SQ S + ++I ++ +L T+AG AADC YW L+K C+ YE + +++ A+
Sbjct: 100 SQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGAS 159
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
++ N+ YR + LS G ++A +D+ GP LY +DN G ++ KF VGSG
Sbjct: 160 KMITNIFFHYRAYD--------LSAGIMIAGFDKD-GPHLYYVDNEGSRVKDCKFSVGSG 210
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG-WQQVLSR 293
+ YA +LD+ YR DL++EEA L AI A RD SGG VR+Y+IN G + V
Sbjct: 211 SLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINKNGVIKHVPGE 270
Query: 294 DVKDIY 299
DV +++
Sbjct: 271 DVSELH 276
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 1 MFITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
M GTTTLGF Y G+ILA DSRA+ I SQ++ K Q
Sbjct: 75 MMNRGTTTLGFIYQGGVILAVDSRASQGSYIASQEVKKIIQ 115
>gi|395728691|ref|XP_003775418.1| PREDICTED: proteasome subunit beta type-8 [Pongo abelii]
Length = 160
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 1 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR--------GMGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G+++ +D+ GP LY ++ G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 53 MGSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 112 GRRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 158
>gi|328766804|gb|EGF76856.1| hypothetical protein BATDEDRAFT_14510, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ +L T+AG AADC +W L + + YE + + +++ A+
Sbjct: 27 TMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSFWERELGRRARLYELRNKERISVAAAS 86
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NMV Y+ GLS GT++ +D+ GP L+ +D+ G ++ F VGSG
Sbjct: 87 KLLSNMVYGYK--------GMGLSMGTMITGWDK-QGPGLFYVDSDGQRLKNHMFSVGSG 137
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ YA +LD Y DLS +A LA +IYHA RD +SGG V +Y + GW+ + + D
Sbjct: 138 STYAYGVLDAGYDYDLSVNDAIDLARRSIYHATFRDAYSGGSVNVYHVQQDGWKFISNTD 197
Query: 295 VKDIY 299
V D++
Sbjct: 198 VMDLH 202
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ +G+++A DSRAT I SQ + K +
Sbjct: 6 GTTTLAFKFAKGVVVAVDSRATMGSYIGSQTVKKVIE 42
>gi|320590110|gb|EFX02555.1| proteasome component [Grosmannia clavigera kw1407]
Length = 284
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG AADC YWL L +EC+ +E +++ +++ A+ +L N
Sbjct: 95 IASQTVKKVIEINSCLLGTMAGGAADCQYWLAWLGRECRLHELRHKRRISVAAASKILAN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 155 LVYSYKG--------MGLSMGTMCAGVTPEEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +Y DL+ ++A L +I A RD SGG + LY + GW + D I+
Sbjct: 207 GVLDAEYSYDLAADDALELGRRSILAATHRDAFSGGFINLYHVKEDGWVKHGFSDTNPIF 266
Query: 300 NDRK 303
K
Sbjct: 267 WKTK 270
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 69 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIE 105
>gi|443900017|dbj|GAC77344.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Pseudozyma antarctica T-34]
Length = 745
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 15/195 (7%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ L
Sbjct: 422 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYL 481
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 482 SNLVYGYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGTRLKGDVFSVGSGSTF 532
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DL+++EA L +IY A RD +SG V LY + GW+ + + DV
Sbjct: 533 AYGVLDQGYKWDLTDDEAQELGRRSIYAAAHRDAYSGNTVNLYHVREDGWEFIDNYDVSK 592
Query: 298 IYNDRKEAPPGGGDH 312
++ D G GDH
Sbjct: 593 LHYD------GPGDH 601
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ DSRATA I S + K +
Sbjct: 398 GTTTLAFRFQGGIIVCVDSRATAGSYIASGTVKKVIE 434
>gi|388500262|gb|AFK38197.1| unknown [Medicago truncatula]
Length = 271
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 87 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 146
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
G S GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD+ Y
Sbjct: 147 --------MGSSVGTMIAGWDET-GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + G +++ DV +++
Sbjct: 198 KYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGRKKLSGDDVGELH 250
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 90
>gi|358253538|dbj|GAA53374.1| proteasome subunit beta type-5 [Clonorchis sinensis]
Length = 541
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T+ +++ ++ +L T+AG AADC YW L+K+C+ +E + + M++ A+
Sbjct: 86 SSGSYIASATTDKILIINKYLLGTMAGGAADCAYWERVLSKQCRLFELRNKERMSVAAAS 145
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ +Y+ GLS GT + +D+ G +Y +D+ G G F VGSG
Sbjct: 146 KLLANMLYEYKGA--------GLSIGTTIVGWDK-KGAGIYYVDDDGQRFTGDLFSVGSG 196
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ YA +LDT Y+ D+ EEAY LA AIYHA RD SGG + L +
Sbjct: 197 STYAYGVLDTMYKYDMKNEEAYELARRAIYHATHRDAASGGFINLASV 244
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
F GTTTL F++ G I+ATDSRA++ I S +K
Sbjct: 62 FNHGTTTLAFKFSGGAIIATDSRASSGSYIASATTDKI 99
>gi|406607444|emb|CCH41235.1| Proteasome subunit beta type-5 [Wickerhamomyces ciferrii]
Length = 285
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + ++ +++ A+ +L N
Sbjct: 99 IASQTVKKVIEINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKSRISVAAASKILSN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ Y + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 159 LVYQYKG--------MGLSMGTMVCGYTKKEGPTIYYVDSDGTRLKGDVFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++ + DL+ EEA L +I A RD +SGG + LY I GW + DV +
Sbjct: 211 GVLDSNLKWDLTVEEALYLGKRSILAAAHRDAYSGGSINLYHITEDGWVFHGNHDVGPTF 270
Query: 300 NDRKE 304
+ KE
Sbjct: 271 YEVKE 275
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA + I SQ + K +
Sbjct: 73 GTTTLAFRFKGGIVVAVDSRATAGNWIASQTVKKVIE 109
>gi|10803370|emb|CAC13117.1| low molecular mass polypeptide subunit PSMB8 [Takifugu rubripes]
Length = 272
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 12/172 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++S +L T++G+AADC+YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 104 KVIEINSYLLGTMSGSAADCMYWERLLAKECRLYRLRNNHRISVAAASKLLANMMLGYR- 162
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ QLY +D G G F GSG YA A++D+
Sbjct: 163 -------GMGLSVGSMICGWDK----QLYYVDENGNRFSGQMFSTGSGNSYAYAVVDSGL 211
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
R D++ EEAY L I +A RD +SGG V +Y + GW +V DV +
Sbjct: 212 REDMTVEEAYDLGRRGIVYATHRDAYSGGVVNMYHMMEDGWIKVCQDDVSQL 263
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A I SQ K +
Sbjct: 71 GTTTLAFKFKHGVIVAVDSRASAGKYISSQDAKKVIE 107
>gi|242777485|ref|XP_002479043.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
gi|218722662|gb|EED22080.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 120 VPHNTSFQVIPVSS--------------SILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
+ T +VIPVS +L T+AG AADC YWL L ++C +E +++
Sbjct: 94 IASQTVKKVIPVSRLNLALDKDHDAPVPGLLGTMAGTAADCQYWLRYLGEQCTLHELRHK 153
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+T+ A+ +L N+ Y++ GL GT++A GP LY +D+ G +
Sbjct: 154 RRITVAAASKILANLTYSYKS--------MGLGMGTMLAGMTPQEGPALYYIDSDGTRLA 205
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G FCVGSG +A +LD +YR DLS +EA L +I A RD +SGG + LY + +
Sbjct: 206 GNLFCVGSGQTFAYGVLDAEYRYDLSTDEALELGRRSILAATHRDAYSGGYINLYHVKEE 265
Query: 286 GWQQVLSRDVKDIYNDRK 303
GW D I+ K
Sbjct: 266 GWVHHGFSDTDPIFWKTK 283
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|452823884|gb|EME30891.1| 20S proteasome subunit beta 5 [Galdieria sulphuraria]
Length = 275
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC +W L C+ +E K + +++ A+ +L N V +Y+
Sbjct: 91 KVIEINKYLLGTMAGGAADCTFWERYLGMRCRIFELKNKERISVAAASKILCNTVYQYKG 150
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP +Y +D+ G ++G+KF VGSG+ +A +LD Y
Sbjct: 151 --------MGLSMGTMIMGWDK-KGPHIYYVDSEGTRLKGSKFSVGSGSTHALGVLDQGY 201
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ ++S EEA L +IYHA RD SGG + +Y I GW+ + D
Sbjct: 202 KWNMSVEEACELGRRSIYHATHRDAFSGGYINVYYIGPDGWKFISHED 249
>gi|217073968|gb|ACJ85344.1| unknown [Medicago truncatula]
Length = 262
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 87 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 146
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
G S GT++A +DE GP LY +D+ G ++G +F VGSG+ YA +LD+ Y
Sbjct: 147 --------MGSSVGTMIAGWDET-GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ D+S EEA LA AIYHA RD SGG +Y + G +++ DV +++
Sbjct: 198 KYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGRKKLSGDDVGELH 250
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 90
>gi|409045696|gb|EKM55176.1| hypothetical protein PHACADRAFT_255622 [Phanerochaete carnosa
HHB-10118-sp]
Length = 300
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 12/195 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+ L
Sbjct: 101 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 160
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP +Y +D+ G ++G F VGSG+ +
Sbjct: 161 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAVYYVDSDGTRLKGDLFSVGSGSTF 211
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++EEA L +IY A RD SG + LY + GW+ + + DV
Sbjct: 212 AYGVLDQGYRWDLTDEEAQELGRRSIYAAGHRDAFSGNTINLYHVQEDGWKFIGNYDVSK 271
Query: 298 IYNDRKEAPPGGGDH 312
++ E P G G +
Sbjct: 272 MH---YEGPEGRGGY 283
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA I S + K +
Sbjct: 77 GTTTLAFRFRGGVIVAVDSRATAGSYIASGTVKKVIE 113
>gi|164658982|ref|XP_001730616.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
gi|159104512|gb|EDP43402.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
Length = 295
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+
Sbjct: 82 SAGSYIASGSVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N+V Y+ GLS GT++ +D+ GP +Y +D+ G ++G F VGSG
Sbjct: 142 KILSNLVYSYKG--------MGLSMGTMICGWDKS-GPAIYYVDSEGSRMKGDLFSVGSG 192
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD Y DLSEEEA L +IY A RD +SG + LY + GW+ + + D
Sbjct: 193 STFAYGVLDQGYHWDLSEEEALDLGRRSIYAATHRDAYSGNTINLYHMGPNGWRFIANYD 252
Query: 295 VKDIYND-----RKEAPPGG 309
V ++ D AP GG
Sbjct: 253 VMQLHYDGVSDQVPNAPSGG 272
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY G+++A DSRA+A I S + K +
Sbjct: 61 GTTTLAFRYKGGVVVAVDSRASAGSYIASGSVKKVIE 97
>gi|55162805|emb|CAH63453.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 252
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AGN +C YW LAKEC+ Y + +++ A+ LL NMV +YR + LS
Sbjct: 94 AGNYINCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMD--------LSM 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY +D G + G F GSG+ YA ++D+ Y+P LS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG + +Y + GW +V S DV ++ + +EA
Sbjct: 205 RRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQYQEA 250
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHPVYTGGERC 61
+ GTTTL F++ G+I+A DSRATA + I Q + + L C L + GER
Sbjct: 69 MVHGTTTLAFKFQHGVIVAVDSRATAGNYINCQ----YWERLLAKECRLYY--LRNGERI 122
Query: 62 GQSYSQR 68
S + +
Sbjct: 123 SVSAASK 129
>gi|395728693|ref|XP_003775419.1| PREDICTED: proteasome subunit beta type-8 [Pongo abelii]
Length = 252
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ DC YW LAKEC+ Y + +++ A+ LL NM+ +YR GLS
Sbjct: 94 AGSYIDCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG--------MGLSM 145
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G+++ +D+ GP LY ++ G + G F GSG YA ++D+ YRP+LS EEAY L
Sbjct: 146 GSMICGWDKK-GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDLG 204
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
AI +A RD +SGG V +Y + GW +V S DV D+ + +EA
Sbjct: 205 RRAIAYATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYQEA 250
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLH 52
GTTTL F++ G+I+A DSRA+A I Q + + L C L +
Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIDCQ----YWERLLAKECRLYY 115
>gi|442749433|gb|JAA66876.1| Putative 20s proteasome regulatory subunit beta type [Ixodes
ricinus]
Length = 279
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGGE G SQS ++I ++ +L T+AG AADCVYW L++ C+ YE + R
Sbjct: 94 TGGEYIG--SQSVK-------KIIVINKYLLGTMAGGAADCVYWQRVLSERCRIYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ LL N++ Y+ GLS G +++ +D+ GP LY +DN G +
Sbjct: 145 ERISVAAASKLLANILYNYK--------GMGLSLGVMISGWDK-RGPGLYYVDNEGNRLS 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G+ F GSG+ YA +LD Y+ D+ + EA+ LA AIYHA RD SGG VR+Y++
Sbjct: 196 GSMFSSGSGSTYAFGVLDNGYKFDMEDGEAFELARKAIYHATFRDSASGGIVRVYRVTEA 255
Query: 286 GWQQVLSRDVKDIY 299
GW+ + D D++
Sbjct: 256 GWECISEEDCMDLH 269
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
GTTTL F+Y G+I+A DSRAT + I SQ + K
Sbjct: 73 GTTTLCFKYKGGVIVAADSRATGGEYIGSQSVKKI 107
>gi|195149838|ref|XP_002015862.1| GL11283 [Drosophila persimilis]
gi|194109709|gb|EDW31752.1| GL11283 [Drosophila persimilis]
Length = 305
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 25/177 (14%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
T +++ ++ +L TLAG AADCVYW LA++ + +E +++ ++
Sbjct: 101 TMKKIVELNDYMLGTLAGGAADCVYWDRVLARDSRLHELRFKRRLS-------------- 146
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
GL G ++A YD+ GP+L +D+ G+ G F VGSG+ YA +LD
Sbjct: 147 ----------GMGLVMGMMLAGYDD-EGPKLIYVDSEGMRCHGNVFAVGSGSPYALGVLD 195
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
T +R ++++EA+ LA AIYHA +D +SGG VRLY IN +GW+ V + D ++YN
Sbjct: 196 TGHRFTMTDQEAFDLARRAIYHATSKDAYSGGIVRLYHINEKGWRNVSNTDCSELYN 252
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++L DSRAT+ I SQ + K +
Sbjct: 68 FAHGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVE 107
>gi|358055465|dbj|GAA98585.1| hypothetical protein E5Q_05272 [Mixia osmundae IAM 14324]
Length = 299
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ YE + +++ A+ L
Sbjct: 98 SYIASGTVRKVIEINPFLLGTMAGGAADCQYWETYLGIQCRLYELANKQRISVAAASKYL 157
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 158 SNLVYGYKG--------QGLSMGTMICGWDKT-GPALFYVDSDGSRMKGDVFSVGSGSTF 208
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DL++EEAY L +IY A RD SG + +Y + GW + + D
Sbjct: 209 AYGVLDQGYKWDLTDEEAYDLGARSIYAAMHRDAFSGNSLNMYHVKEDGWLRFPNVDFNK 268
Query: 298 IYNDR 302
++ DR
Sbjct: 269 LHYDR 273
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY G+++A DSRATA I S + K +
Sbjct: 74 GTTTLAFRYKGGVLVAVDSRATAGSYIASGTVRKVIE 110
>gi|242001650|ref|XP_002435468.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215498804|gb|EEC08298.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 279
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 18/194 (9%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGGE G SQS ++I ++ +L T+AG AADCVYW L++ C+ YE + R
Sbjct: 94 TGGEYIG--SQSVK-------KIIVINKYLLGTMAGGAADCVYWQRVLSERCRIYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ LL N++ Y+ GLS G +++ +D+ GP LY +DN G +
Sbjct: 145 ERISVAAASKLLANILYNYK--------GMGLSLGVMISGWDK-RGPGLYYVDNEGNRLS 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ 285
G+ F GSG+ YA +LD Y+ D+ + EA+ LA AIYHA RD SGG VR+Y++
Sbjct: 196 GSMFSSGSGSTYAFGVLDNGYKFDMEDGEAFELARKAIYHATFRDSASGGIVRVYRVTEA 255
Query: 286 GWQQVLSRDVKDIY 299
GW+ + D D++
Sbjct: 256 GWECISEEDCMDLH 269
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
GTTTL F+Y G+++A DSRAT + I SQ + K
Sbjct: 73 GTTTLCFKYKGGVVVAADSRATGGEYIGSQSVKKI 107
>gi|396081986|gb|AFN83600.1| proteasome subunit beta type-5 [Encephalitozoon romaleae SJ-2008]
Length = 229
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ ++L T+AG AADC +W + K YE +T A+
Sbjct: 52 TSGSYIASQTVNKVIEINRNLLGTMAGGAADCFFWEKLMGLYAKNYELTNGRRITAAAAS 111
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N V +Y+ GLS GT++ YD + P +Y +D+ G ++G F VGSG
Sbjct: 112 MYLSNCVYRYK--------GYGLSMGTMICGYDGSI-PSIYYVDDDGKRVKGNLFSVGSG 162
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A IL + YR D+S++EA L AI+HA RD +SGG + LY ++ GW +V S D
Sbjct: 163 STVAYGILSSSYRFDMSKQEALELGREAIFHAAHRDAYSGGSINLYYMDKDGWTKVGSYD 222
Query: 295 VKDI 298
V D
Sbjct: 223 VDDF 226
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRAT+ I SQ +NK +
Sbjct: 31 GTTTLAFVFKEGMVIAVDSRATSGSYIASQTVNKVIE 67
>gi|198475469|ref|XP_002132926.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
gi|198138837|gb|EDY70328.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
Length = 270
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 14/222 (6%)
Query: 82 SPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCT 138
+P L+ +S I G + L VY GG S+SS+ V T +++PVSS I+ T
Sbjct: 50 TPDLTNASLKIDHGTTA--LGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPVSSQIVGT 107
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
LAG +ADC YW LA+E + +E +Y+ M++ AA ++ ++ +R GL+
Sbjct: 108 LAGGSADCTYWYRVLARENRLHELRYKRPMSVDAAAKMICHVSEMHRG--------TGLN 159
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G L+A Y GP L +D+ G+ I G +F VGSGA A ILD YR DL++EEA+ L
Sbjct: 160 MGMLLAGYSP-KGPSLVYVDSDGVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDL 218
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
A ++ A D +GG V LY + + V D +++N
Sbjct: 219 ALQSLCQATLCDASTGGMVVLYHVGPAAHRIVRKVDCMELHN 260
>gi|311697305|gb|ADQ00176.1| 20S proteasome beta subunit E type beta 5 [Chlamydomonas sp. ICE-L]
Length = 170
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC +W +L K+C+ YE +T+ A+ LL N + YR GLS
Sbjct: 1 MAGGAADCQFWQRNLGKQCRLYELNNGKRITVCAASKLLANTMFSYRG--------MGLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
GT++A +D GP LY +D+ G +G +F VGSG+ YA ILD+ Y+ D+ +EA L
Sbjct: 53 MGTMVAGFDAT-GPGLYYVDSDGQRTKGQRFSVGSGSLYAYGILDSGYKWDMPVDEAIEL 111
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
AIYHA RD SGG V +Y + GW++V DV +++
Sbjct: 112 GRRAIYHATFRDCASGGTVSVYHVTKDGWKKVHGDDVSELH 152
>gi|398396578|ref|XP_003851747.1| proteasome core particle subunit beta 5 [Zymoseptoria tritici
IPO323]
gi|339471627|gb|EGP86723.1| hypothetical protein MYCGRDRAFT_109970 [Zymoseptoria tritici
IPO323]
Length = 281
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 130/268 (48%), Gaps = 37/268 (13%)
Query: 65 YSQRSHC--VAETQQ-DHFLSPPLS-----------QSSQHIISGDSCELLHPV------ 104
YSQ SH + +T+Q + L+PPLS QS ++ D+ P+
Sbjct: 8 YSQPSHTEDLDDTEQINTDLAPPLSLKFALPPIASSQSWLRAMTDDASNPNCPIKIAHGT 67
Query: 105 ------YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+ GG S+++ + T +VI ++S +L T+AG AADC YWL L
Sbjct: 68 TTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEINSCLLGTMAGGAADCQYWLAYLGM 127
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+C+ +E +++ +++ A+ +L N+V Y+ GLS GT+ A GP LY
Sbjct: 128 QCRLHELRHKRRISVAAASKILANLVYSYKG--------MGLSMGTMCAGVTPSEGPALY 179
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+D+ G + G FCVGSG +A +LD +Y DL ++ A L +I A RD +SGG
Sbjct: 180 YIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYSYDLEDDAALELGRRSILAATHRDAYSGG 239
Query: 276 CVRLYKINGQGWQQVLSRDVKDIYNDRK 303
+ LY + GW + D I+ K
Sbjct: 240 FINLYHVKEDGWVKHGFSDTNPIFWKTK 267
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 66 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 102
>gi|18250329|gb|AAL60589.1| proteosome subunit LMP7/PSMB8 [Oncorhynchus mykiss]
Length = 168
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 9/168 (5%)
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
++ +L T++G+AADC YW LAKEC+ Y+ + + +++ A+ LL NM+ YR
Sbjct: 1 INPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYR----- 55
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
GLS G+++ +D GP LY +D+ + G F G G+ YA ++D+ Y D+
Sbjct: 56 ---GMGLSMGSMIVGWDNK-GPGLYYVDDNATRLSGRMFSTGCGSSYAYGVMDSGYHEDM 111
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+ EEAY L I HA RD +SGG V LY + GW +V DV ++
Sbjct: 112 TVEEAYELGRRGITHATHRDAYSGGVVNLYHMQEDGWIKVCKEDVSEL 159
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
SQ + + ++I ++ +L T+AG AADC YW L+K C+ YE + +++ A+
Sbjct: 100 SQGNYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGAS 159
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
++ N+ YR + LS G ++A +D+ GP LY +DN G ++ KF VGSG
Sbjct: 160 KMITNIFFHYRAYD--------LSAGIMIAGFDKD-GPHLYYVDNEGSRVKDCKFSVGSG 210
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG-WQQVLSR 293
+ YA +LD+ YR DL++EEA L AI A RD SGG VR+Y+IN G + V
Sbjct: 211 SLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINKSGVIKHVPGE 270
Query: 294 DVKDIY 299
DV +++
Sbjct: 271 DVSELH 276
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MFITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
M GTTTLGF Y G+ILA DSRA+ + I SQ++ K Q
Sbjct: 75 MMNRGTTTLGFIYQGGVILAVDSRASQGNYIASQEVKKIIQ 115
>gi|330932201|ref|XP_003303688.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
gi|311320144|gb|EFQ88213.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI +++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINNCLLGTMAGGAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y+ GLS GT+ A GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LIYSYKG--------MGLSMGTMCAGVTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD Y+ +L ++EA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDASYKYELEDDEALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFNDTNPIF 265
Query: 300 NDRK 303
+ K
Sbjct: 266 WETK 269
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|385303474|gb|EIF47547.1| proteasome component pre2 precursor [Dekkera bruxellensis AWRI1499]
Length = 284
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 96 SWVASQTVKKVIEINPMLLGTMAGGAADCQYWETWLGTQCRLHELRNKERISVAAASKIL 155
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ Y GP +Y +D+ G ++G F VGSG +
Sbjct: 156 SNLVYSYKG--------MGLSMGTMICGYTPKEGPTIYYVDSDGTRVKGNIFSVGSGQTF 207
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D +YR DLS +EA L AI A RD +SGG + LY + +GW + +V
Sbjct: 208 AYGVMDANYRWDLSVDEALYLGKRAILAATHRDAYSGGSINLYHVTEKGWVYHGNYNVGP 267
Query: 298 IYNDRKE 304
++ + KE
Sbjct: 268 LFWEIKE 274
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ EGII+A DSRATA + SQ + K +
Sbjct: 72 GTTTLAFRFKEGIIVAVDSRATAGSWVASQTVKKVIE 108
>gi|348677188|gb|EGZ17005.1| hypothetical protein PHYSODRAFT_285863 [Phytophthora sojae]
Length = 290
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 121/235 (51%), Gaps = 16/235 (6%)
Query: 73 AETQQDHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQS---STVPHNTSFQVI 129
A ++HF + Q + L +Y GG S+S S + +V
Sbjct: 60 AAYSREHFKVKYTEDNEQTLNFAKGTTTLAFIYNGGIIVAVDSRSTMGSFIGSQQVKKVN 119
Query: 130 PVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNH 189
P++ IL TLAG AADC +W +LA +C+ YE + R +++R A+ L+ N Y+
Sbjct: 120 PINDYILATLAGGAADCQFWQRNLAVQCRMYELRNRHRISVRAASKLIANTCNYYKRYGM 179
Query: 190 SSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK----FCVGSGAEYAQAILDTD 245
S +M YD P LY +D+ G I +K F VGSG+ YA +LDT+
Sbjct: 180 SLG--------MMMMGYDN-GKPVLYYVDDEGSRIPASKDVPKFSVGSGSTYAYGVLDTN 230
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
+R DL+++EA L AIYHA RD +SGG +Y +G++ V+ +DVK++++
Sbjct: 231 WRWDLTDDEAVELGKRAIYHATHRDAYSGGICNVYIFKPEGFKHVVHQDVKEMHD 285
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
F GTTTL F Y GII+A DSR+T I SQ++ K
Sbjct: 81 FAKGTTTLAFIYNGGIIVAVDSRSTMGSFIGSQQVKK 117
>gi|47216876|emb|CAG11683.1| unnamed protein product [Tetraodon nigroviridis]
Length = 270
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + +VI ++ +L T++G+AADC+YW LAKEC+ Y + +++ A+
Sbjct: 89 SAGSYIASPVAKKVIEINPYLLGTMSGSAADCMYWERLLAKECRLYRLRNNRRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D G G F GSG
Sbjct: 149 KLLANMMLGYRG--------MGLSVGSMICGWDK-QGPGLYYVDENGNRFPGQMFSTGSG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YA A++D R D+S EEAY L I +A RD +SGG V +Y + GW +V D
Sbjct: 200 NSYAYAVVDNGLRADMSVEEAYELGRRGIAYATHRDAYSGGVVNMYHMKEDGWVKVCMDD 259
Query: 295 VKDIYNDRKE 304
V + + K+
Sbjct: 260 VSQLLHGYKK 269
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ +G+I+A DSRA+A I S K +
Sbjct: 68 GTTTLAFKFNQGVIVAVDSRASAGSYIASPVAKKVIE 104
>gi|392566975|gb|EIW60150.1| proteasome component pts1 [Trametes versicolor FP-101664 SS1]
Length = 310
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+ L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 166 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAIFYVDSDGSRLKGDLFSVGSGSTF 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DL++EEA+ L +IY A RD SG V LY + GW+ + + DV +
Sbjct: 217 AYGVLDQGYKWDLTDEEAHELGRRSIYAAGHRDAFSGNTVNLYHVQQDGWKFIGNYDVSE 276
Query: 298 IY 299
++
Sbjct: 277 LH 278
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY G+I+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRYKGGVIVAVDSRATAGSYVASGTVKKVIE 118
>gi|395333726|gb|EJF66103.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 314
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+ L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 166 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAIFYVDSDGSRLKGDLFSVGSGSTF 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++ EA L +IY A RD SG V LY + GWQ + + DV
Sbjct: 217 AYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNTVNLYHVKQDGWQFIGNYDVSK 276
Query: 298 IYNDRKEAPPG 308
++ + PG
Sbjct: 277 LHYEGPGDVPG 287
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIE 118
>gi|403413320|emb|CCM00020.1| predicted protein [Fibroporia radiculosa]
Length = 302
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L EC+ +E + R +++ A+ L
Sbjct: 104 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETFLGIECRLHELRNRERISVAAASKFL 163
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 164 SNLVYSYKG--------MGLSMGTMICGWDKT-GPTIFYVDSDGTRLKGDLFSVGSGSTF 214
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y DL++EEA L +IY A RD SG + LY + GW+ + + DV +
Sbjct: 215 AYGVLDQGYHWDLTDEEALELGRRSIYAAGHRDAFSGNTINLYHVQEDGWKFIGNYDVSE 274
Query: 298 IY 299
++
Sbjct: 275 MH 276
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY G+I+A DSRATA + S + K +
Sbjct: 80 GTTTLAFRYKGGVIVAVDSRATAGSYVASGTVKKVIE 116
>gi|320581894|gb|EFW96113.1| Beta 5 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 284
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG A DC YW L +C+ +E + + +++ A+ +L N
Sbjct: 98 IASQTVKKVIEINPMLLGTMAGTACDCQYWETWLGTQCRLHELRNKERISVCAASKILCN 157
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GL GT++ Y GP +Y +D+ G ++G FCVGSG +A
Sbjct: 158 LVYSYKG--------MGLGMGTMICGYTPKEGPTIYYVDSDGTRLKGDLFCVGSGQTFAY 209
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LDT+Y+ DLS E+A L AI A RD +SGG + LY + GW + DV ++
Sbjct: 210 GVLDTNYKWDLSVEDALYLGKRAILAAAHRDAYSGGSINLYHVTENGWVFHGNHDVGPLF 269
Query: 300 NDRKE 304
+ KE
Sbjct: 270 WEIKE 274
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + I SQ + K +
Sbjct: 72 GTTTLAFRFQGGIIVAVDSRATAGNWIASQTVKKVIE 108
>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q + N+ +VI ++ +L T+AG AADC +W + E + YE + +++ A+
Sbjct: 87 TQGQFIASNSVHKVIEINPFLLGTMAGGAADCYFWERRMGVEARLYELRNGERISVAAAS 146
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK----FC 230
+L + + Y+ GLS GT++ +D+ GPQ++ +DN G ++ + F
Sbjct: 147 KILSDFLYHYK--------DYGLSVGTMICGWDKT-GPQIFYVDNDGTRLKADEKRSYFS 197
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ YA A+LD Y D++++EA L AIYHA RD SGG +Y I +GW+ +
Sbjct: 198 VGSGSSYAYAVLDQLYHYDMTDDEAIDLGRRAIYHATHRDAMSGGINNVYLIKPEGWRFI 257
Query: 291 LSRDVKDIY 299
+ DVKD++
Sbjct: 258 GAIDVKDLH 266
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ G+I++ DSRAT I S ++K +
Sbjct: 63 FCKGTTTLAFKFQGGVIVSVDSRATQGQFIASNSVHKVIE 102
>gi|339238175|ref|XP_003380642.1| proteasome subunit beta type-5 [Trichinella spiralis]
gi|316976444|gb|EFV59740.1| proteasome subunit beta type-5 [Trichinella spiralis]
Length = 307
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 123 NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
+T +VIP+S IL TLAG AADC +WL ++K CK YE +Y+ +++ A L N++
Sbjct: 106 STVMKVIPLSGRILSTLAGGAADCQFWLRVISKICKLYELRYKCEISVAAATKTLQNIIL 165
Query: 183 KYR-TGNHSSKIPNGLSFGT-------LMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+Y G I G + L + +D+ GP LY LD+ G + F GSG
Sbjct: 166 EYLGYGLSMGMIVGGFNHDVRSHHHHLLFSIFDDKYGPALYFLDSEGTRKKSHLFSCGSG 225
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A ILDT Y+P ++++EA LA AI HA RDI SGG ++ + G+ D
Sbjct: 226 SLNAYGILDTFYKPSMTDDEAKDLARRAIMHATYRDIGSGGQCSVFHLQPSGYNLESQTD 285
Query: 295 VKDIYNDRKE 304
V D+Y+ E
Sbjct: 286 VSDMYHSFME 295
>gi|3980264|emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum]
Length = 238
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 9/157 (5%)
Query: 143 AADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTL 202
AADC +W +L +C+ +E + +++ A+ LL N++ YR GLS GT+
Sbjct: 70 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG--------MGLSVGTM 121
Query: 203 MAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSA 262
+A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+ Y+ D+S EEA LA A
Sbjct: 122 IAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKYDMSIEEASELARRA 180
Query: 263 IYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
IYHA RD SGG +Y + GW+++ DV +++
Sbjct: 181 IYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELH 217
>gi|378733450|gb|EHY59909.1| proteasome component PRE2 [Exophiala dermatitidis NIH/UT8656]
Length = 283
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YWL L +C+ +E +++ +++ A+ +L N
Sbjct: 94 IASQTVKKVIEINPMLLGTMAGGAADCQYWLAYLGIQCRLHELRHKRRISVAAASKILAN 153
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT++ GP LY +D+ G + G FCVGSG +A
Sbjct: 154 LVYSYKG--------MGLSMGTMITGVTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAY 205
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD Y+ DL ++EA L +I A RD +SGG + LY + GW + D I+
Sbjct: 206 GVLDALYKYDLEDDEALELGRRSILAATHRDAYSGGYINLYHVKEDGWVKHGFFDTNPIF 265
Query: 300 NDRK 303
K
Sbjct: 266 WQTK 269
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|320169928|gb|EFW46827.1| LMP X [Capsaspora owczarzaki ATCC 30864]
Length = 295
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC +W LA+ C+ YE + + +++ A+ LL
Sbjct: 124 SYIASGTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRIYELRNKERISVAAASKLL 183
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
NMV Y+ GLS GT++ +D+ GP+LY +D+ G + G F VGSG+ Y
Sbjct: 184 ANMVYGYKN--------MGLSMGTMITGWDK-RGPELYYVDSDGTRLHGDMFSVGSGSTY 234
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD +R D++ EEA L +IYHA LY + +GW ++ S DV
Sbjct: 235 AYGVLDAGFRYDMTPEEACELGRRSIYHAT----------HLYHVREEGWVKISSTDVNQ 284
Query: 298 IY 299
++
Sbjct: 285 LH 286
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ GII+A DSRAT I S + K +
Sbjct: 100 GTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIE 136
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ +IL T+AG AADC+YW L K K YE + +++R
Sbjct: 82 GSFISSQNVE-----KIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVR 136
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 137 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 187
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +LS E+A LA +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 188 GSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGGSGGKVRVFYIHKNGYDKII 247
Query: 292 S-RDVKDIY 299
DV D++
Sbjct: 248 EGEDVYDLH 256
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ +GII+A DSRA+ I SQ + K +
Sbjct: 56 FHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIE 95
>gi|299752963|ref|XP_002911819.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
gi|298410081|gb|EFI28325.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
Length = 313
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L C+ +E + + +++ A+ L
Sbjct: 107 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNKERISVSAASKFL 166
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 167 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAIFYVDSDGTRLKGDLFSVGSGSTF 217
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++ EA L +IY A RD SG V LY + GW+ + + DV
Sbjct: 218 AYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNSVNLYHVKEHGWEFIGNYDVNK 277
Query: 298 IYND 301
++ D
Sbjct: 278 LHYD 281
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA I S + K +
Sbjct: 83 GTTTLAFRFQGGVIVAVDSRATAGSYIASGTVKKVIE 119
>gi|237842737|ref|XP_002370666.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|211968330|gb|EEB03526.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|221485637|gb|EEE23918.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221502989|gb|EEE28699.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 309
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 125/234 (53%), Gaps = 16/234 (6%)
Query: 83 PPLSQSSQHIIS-GDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCT 138
PP +Q+ +++ L V+ GG S++S + + +VI +S IL T
Sbjct: 81 PPSAQAGSPVMAMKKGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISDIILGT 140
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC YW + CK ++ + + + A+N+L N+ +R GL
Sbjct: 141 MAGGAADCSYWERHMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRG--------YGLC 192
Query: 199 FGTLMAAYDEI-LGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYA 257
GT++A ++E P+LY +D+ ++G F GSG+ YA +LD +Y+ D+++EEA
Sbjct: 193 CGTMIAGWNEKDEKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVE 252
Query: 258 LATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL-SRDVKDIYND--RKEAPPG 308
L AIY A RD SGG VR++ I+ GW++V+ DV +++ + K+ PG
Sbjct: 253 LGKRAIYQAAHRDGGSGGVVRVFHIHRGGWKKVIPGMDVSELHYEYAAKKGMPG 306
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTLGF + GIILA DSRA+ I SQ + K + S
Sbjct: 96 GTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEIS 134
>gi|336367168|gb|EGN95513.1| hypothetical protein SERLA73DRAFT_186558 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379886|gb|EGO21040.1| hypothetical protein SERLADRAFT_475676 [Serpula lacrymans var.
lacrymans S7.9]
Length = 317
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 9/187 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S V T +VI ++ +L T+AG AADC YW L C+ +E + R +++ A+
Sbjct: 102 TAGSYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAAS 161
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG
Sbjct: 162 KYLSNLVYGYK--------GMGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDLFSVGSG 212
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD YR DLS+EEA L +IY A RD SG LY + GW + + D
Sbjct: 213 STFAYGVLDQGYRWDLSDEEAQELGRRSIYAAGHRDAFSGNTCNLYHVKENGWNFIGNYD 272
Query: 295 VKDIYND 301
+ ++ D
Sbjct: 273 ISKLHYD 279
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 81 GTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIE 117
>gi|345564886|gb|EGX47845.1| hypothetical protein AOL_s00083g57 [Arthrobotrys oligospora ATCC
24927]
Length = 282
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q S + T +VI ++ +L T+AG AADC YWL L EC+ ++ +++ +++ A+
Sbjct: 88 TQGSWIASQTVKKVIEINPYLLGTMAGGAADCQYWLTYLGMECRLHQLRHKRLISVAAAS 147
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLM--AAYDEILGPQLYMLDNTGLLIEGTKFCVG 232
+L N+V Y+ GLS GT++ + + G LY +D+ G +EG FCVG
Sbjct: 148 KILANLVYSYK--------GMGLSMGTMLTGVGHGGVFG--LYYVDSDGNRVEGNLFCVG 197
Query: 233 SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
SG +A +LD Y+ DL++EEA L +I A RD +SGG + LY I GW
Sbjct: 198 SGQTFAYGVLDRGYKWDLTDEEALELGRRSILAATHRDAYSGGYLNLYHIQKDGW 252
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F+Y G+I+ TDSRAT I SQ + K +
Sbjct: 67 GTTTLAFKYQGGVIVCTDSRATQGSWIASQTVKKVIE 103
>gi|149627583|ref|XP_001519245.1| PREDICTED: proteasome subunit beta type-11-like [Ornithorhynchus
anatinus]
Length = 295
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 9/181 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
S +VIPV +L T +G +ADC W L +E + + ++ AA LL M+ +
Sbjct: 78 ASLKVIPVHRHLLGTTSGTSADCAAWFRVLQRELRLRALREGRLPSVAGAARLLAGMLHR 137
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
Y+ + L T++ +D GP L+ + + G L+ GT F VGSG+ YA +LD
Sbjct: 138 YQGLD--------LCVATVLCGWDRS-GPALFYVYSDGTLLPGTVFSVGSGSPYAYGVLD 188
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR D+ EAYALA A+ HA RRD +SGG V LY + GW+ V +D +Y +
Sbjct: 189 RGYRYDMEPHEAYALARQAVAHAARRDAYSGGSVDLYHVRESGWEHVSRQDACVLYRGLQ 248
Query: 304 E 304
E
Sbjct: 249 E 249
>gi|390461498|ref|XP_002746454.2| PREDICTED: proteasome subunit beta type-8 [Callithrix jacchus]
Length = 401
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 9/151 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 105 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 164
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D G + G F GSG YA ++D+ Y
Sbjct: 165 --------MGLSMGSMICGWDKK-GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGY 215
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
RP+LS EEAY LA AI HA RD +SGG V
Sbjct: 216 RPNLSPEEAYDLARRAIAHATHRDSYSGGVV 246
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I A DSRA+A I + ++NK +
Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYIATLRVNKVIE 108
>gi|353236461|emb|CCA68455.1| probable PRE2-20S core proteasome subunit (beta5) (C-terminal
fragment) [Piriformospora indica DSM 11827]
Length = 298
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+
Sbjct: 99 TAGSYIASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAAS 158
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG
Sbjct: 159 KYLSNLVYSYKG--------MGLSMGTMICGWDKT-GPALFYVDSDGTRLKGDVFSVGSG 209
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD Y +LS+E+A L +IY A RD SG + LY + GW+ + + D
Sbjct: 210 STFAYGVLDQGYHWELSDEDAQELGRRSIYAAGHRDAFSGNTINLYHVRETGWEFIGNYD 269
Query: 295 VKDIYNDRKEAPPG 308
V ++ D PG
Sbjct: 270 VTKMHYDGPGNIPG 283
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 78 GTTTLAFRFRGGIIVAVDSRATAGSYIASGTVKKVIE 114
>gi|254573994|ref|XP_002494106.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Komagataella
pastoris GS115]
gi|238033905|emb|CAY71927.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Komagataella
pastoris GS115]
gi|328354075|emb|CCA40472.1| 20S proteasome subunit beta 5 [Komagataella pastoris CBS 7435]
Length = 281
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L N
Sbjct: 95 IASQTVNKVIRINPFLLGTMAGGAADCQYWETWLGTQCRLHELREKERISVAAASKILGN 154
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V +Y+ GLS GT++ + + GP +Y +D+ G ++G FCVGSG +A
Sbjct: 155 LVYQYK--------GMGLSMGTMVCGFTKKEGPTIYYVDSDGSRLKGDMFCVGSGQTFAY 206
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD++Y+ DLS E+A L +I A RD +SGG + LY + GW + D D +
Sbjct: 207 GVLDSNYKWDLSVEDALYLGKRSILAAQHRDAYSGGSINLYHVTESGWVYHGNFDFDDTF 266
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ EGII+A DSRATA D I SQ +NK +
Sbjct: 69 GTTTLAFRFKEGIIVAVDSRATAGDWIASQTVNKVIR 105
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ +IL T+AG AADC+YW L K K YE + +++R
Sbjct: 85 GSFISSQNVE-----KIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVR 139
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 140 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 190
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +LS E+A LA +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 191 GSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGGSGGKVRVFYIHKNGYDKII 250
Query: 292 S-RDVKDIY 299
+DV +++
Sbjct: 251 EGQDVYELH 259
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ EGII+A DSRA+ I SQ + K +
Sbjct: 59 FHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIE 98
>gi|70923607|ref|XP_734786.1| 20S proteasome beta subunit [Plasmodium chabaudi chabaudi]
gi|56507845|emb|CAH78065.1| 20S proteasome beta subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 205
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ IL T+AG AADC YW L + K YE + +++R
Sbjct: 17 GSFISSQNVE-----KIIEINKHILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVR 71
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 72 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 122
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILDT Y +LS EEA L +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 123 GSGSTYAYSILDTAYDYNLSVEEAVELGRNAIYHATFRDGGSGGKVRVFYIHKDGYSKII 182
Query: 292 S-RDVKDIY 299
DV D++
Sbjct: 183 EGEDVYDLH 191
>gi|269860673|ref|XP_002650056.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
bieneusi H348]
gi|220066543|gb|EED44021.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
bieneusi H348]
Length = 233
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC+YW + K YE K +T A+ L
Sbjct: 58 SYIASQTVNKVIEINKYLLGTMAGCAADCLYWEKKMGFYAKEYEIKTGKKITASQASYYL 117
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N + KY+ G+S GT++ YD+ P++YM+D+ G IE F VGSG+
Sbjct: 118 SNCINKYK--------GYGMSMGTMVCGYDK--EPKIYMVDDQGRRIENNIFSVGSGSTI 167
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +L + Y DL++EEA L AIY A RD +SGG V +Y ++ GW ++ D
Sbjct: 168 AYGVLSSRYSYDLTKEEAIQLGKDAIYAAGHRDAYSGGTVNVYFMDHNGWSKIGRWDFNQ 227
Query: 298 IYNDRK 303
I ++ K
Sbjct: 228 IQDEIK 233
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 3 ITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F + EG+I+A DSRATA I SQ +NK +
Sbjct: 32 VHGTTTLAFVFKEGMIIAVDSRATAGSYIASQTVNKVIE 70
>gi|197129148|gb|ACH45646.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
gi|197129149|gb|ACH45647.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
Length = 279
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ +L T+AG AADC +W +A++C+ E + + +++ A+ LL N+V +Y+
Sbjct: 109 KVLPIGGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKG 168
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD
Sbjct: 169 --------LGLSLGTMLCGWDK-RGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGL 219
Query: 247 -RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
SEE A LA AI A RD +SGGCVR+ + +GW++V D+ ++ + EA
Sbjct: 220 AAAARSEEAACELARRAIAQAAHRDAYSGGCVRVMHVGPEGWREVSHHDIAELQDKYLEA 279
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
+ GTTTL F+ P G+ +A DSRATA I SQ + K
Sbjct: 73 ILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRK 109
>gi|405121321|gb|AFR96090.1| proteasome component pts1 [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 137 SYVASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKIL 196
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 197 SNIVYQYK--------GMGLSMGTMVCGWDKT-GPCIFYVDDDGQRLKGDLFSVGSGSTF 247
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS+EEA L +I A RD +SG LY + +GW+ + + D+ +
Sbjct: 248 AYGVLDQGYKWDLSDEEAQELGRRSIVAAGHRDAYSGNTCNLYHVRQEGWEFIGNYDINE 307
Query: 298 IY 299
++
Sbjct: 308 LW 309
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + S + K +
Sbjct: 113 GTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKVIE 149
>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ D++ EEAY L I HA RD +SGG V +Y I
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHI 248
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+ I + + NK +
Sbjct: 69 GTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIE 105
>gi|195159798|ref|XP_002020765.1| GL14524 [Drosophila persimilis]
gi|194117715|gb|EDW39758.1| GL14524 [Drosophila persimilis]
Length = 270
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 14/221 (6%)
Query: 82 SPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCT 138
+P L+ +S I G + L VY GG S+SS+ V T +++PVSS I+ T
Sbjct: 50 TPDLTNASLKIDHGTTA--LGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPVSSQIVGT 107
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
LAG +ADC YW LA+E + +E +Y+ M++ AA ++ ++ +R GL+
Sbjct: 108 LAGGSADCTYWYRVLARESRLHELRYKRPMSVDAAAKMICHVSEMHRG--------TGLN 159
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
G L+A Y GP L +D+ G+ I G +F VGSGA A ILD YR DL++EEA+ L
Sbjct: 160 MGMLLAGYSP-KGPSLVYVDSDGVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDL 218
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
A ++ A D +GG V L+ + + V D +++
Sbjct: 219 ALQSLCQATLCDASTGGMVVLHHVGPAAHRIVRKVDCMELH 259
>gi|321260090|ref|XP_003194765.1| proteasome component [Cryptococcus gattii WM276]
gi|317461237|gb|ADV22978.1| Proteasome component, putative [Cryptococcus gattii WM276]
Length = 301
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 109/191 (57%), Gaps = 12/191 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 106 SYVASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKIL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 166 SNIVYQYK--------GMGLSMGTMVCGWDKT-GPCIFYVDDDGQRLKGDLFSVGSGSTF 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS+EEA L +I A RD +SG LY + +GW+ + + D+ +
Sbjct: 217 AYGVLDQGYKWDLSDEEAQELGRRSIVAAGHRDAYSGNTCNLYHVRQEGWEFIGNYDINE 276
Query: 298 I---YNDRKEA 305
+ Y +K+A
Sbjct: 277 LWYEYEGKKKA 287
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKVIE 118
>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ D++ EEAY L I HA RD +SGG V +Y I
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHI 248
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+ I + + NK +
Sbjct: 69 GTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIE 105
>gi|225193029|dbj|BAH29649.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193056|dbj|BAH29667.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDKD-GPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ D++ EEAY L I HA RD +SGG V +Y I
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|432883660|ref|XP_004074316.1| PREDICTED: proteasome subunit beta type-8-like [Oryzias latipes]
Length = 195
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 119 TVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLV 178
+ N +VI ++ +L +++G+AADC YW LAKE + Y + +++ A+ LL
Sbjct: 23 SATSNDVNKVIEINPYLLGSMSGSAADCQYWERLLAKEYRLYRLRNNHRISVAAASKLLC 82
Query: 179 NMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYA 238
NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G YA
Sbjct: 83 NMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYA 133
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
++D+ Y+ D++ EEAY L I HA RD +SGG V +Y + GW +V DV++
Sbjct: 134 YGVVDSGYKEDMTVEEAYELGCRDIAHATHRDAYSGGSVNMYHMREDGWIKVCKEDVQN 192
>gi|399218150|emb|CCF75037.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T ++I ++ +L T+AG AADC YW L+K C+ ++ K+ ++I A+
Sbjct: 48 SMGSIISSQTVKKIIEINEYMLGTMAGCAADCSYWERHLSKLCRLHQVKHGERVSIVAAS 107
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L N++ +R GLS GT++A +D GP+L + + G + G F VGSG
Sbjct: 108 KMLANIMYYFR--------GYGLSMGTMLAGWDHT-GPKLCCIMDDGSRVVGNLFSVGSG 158
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR- 293
+ +A ++D Y+ DL+ +EA L IY A RD SGGCV +Y ++ GW +V+ R
Sbjct: 159 SLFAYGVIDDGYKFDLTVDEAVELGKRGIYQATLRDGGSGGCVTVYHVHQNGWTKVVDRQ 218
Query: 294 DVKDIY 299
DV +++
Sbjct: 219 DVSELH 224
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + GII+A DSRA+ +I SQ + K +
Sbjct: 27 GTTTLAFVFQGGIIVAVDSRASMGSIISSQTVKKIIE 63
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ +IL T+AG AADC+YW L K K YE + +++R
Sbjct: 83 GSFISSQNVE-----KIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVR 137
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D++G +EG F
Sbjct: 138 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYVDDSGKKVEGNLFSC 188
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +L+ ++A LA +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 189 GSGSTYAYSILDSAYDYNLNLDQAVELARNAIYHATFRDGGSGGKVRVFHIHKNGYDKII 248
Query: 292 S-RDVKDIY 299
DV D++
Sbjct: 249 EGEDVFDLH 257
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ +GII+A DSRA+ I SQ + K +
Sbjct: 57 FHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIE 96
>gi|170088512|ref|XP_001875479.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164650679|gb|EDR14920.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 307
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L C+ +E + R +++ A+ L
Sbjct: 99 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAASKYL 158
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 159 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDLFSVGSGSTF 209
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++ EA L +IY A RD SG LY + GW + + D+
Sbjct: 210 AYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNSCNLYHVKEDGWHFIGNYDISK 269
Query: 298 IYNDRKEAPPG 308
++ D PG
Sbjct: 270 LHYDGPGDVPG 280
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 75 GTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIE 111
>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +DN G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDNNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|197129150|gb|ACH45648.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 279
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ +L T+AG AADC +W +A++C+ E + + +++ A+ LL N+V +Y+
Sbjct: 109 KVLPIDGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKG 168
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD
Sbjct: 169 --------LGLSLGTMLCGWDK-RGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGL 219
Query: 247 -RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
SEE A LA AI A RD +SGGCVR+ + +GW++V D+ ++ + EA
Sbjct: 220 AAAARSEEAACELARRAIAQAAHRDAYSGGCVRVMHVGPEGWKEVSHDDIAELQDKYLEA 279
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
+ GTTTL F+ P G+ +A DSRATA I SQ + K
Sbjct: 73 ILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRK 109
>gi|401412600|ref|XP_003885747.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
gi|325120167|emb|CBZ55721.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
Length = 310
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 83 PPLSQS-SQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCT 138
PP +Q+ S + L V+ GG S++S + + +VI +S IL T
Sbjct: 82 PPSAQTGSPAMAMKKGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISDIILGT 141
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC YW + CK ++ + + + A+N+L N+ +R GL
Sbjct: 142 MAGGAADCSYWERHMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRG--------YGLC 193
Query: 199 FGTLMAAYDEIL-GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYA 257
GT++A ++E P+LY +D+ ++G F GSG+ YA +LD +Y+ D+++EEA
Sbjct: 194 CGTMIAGWNEKEEKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVE 253
Query: 258 LATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL-SRDVKDIYND--RKEAPPG 308
L AIY A RD SGG VR++ I+ GW +V+ DV +++ + K+ PG
Sbjct: 254 LGKRAIYQAAHRDGGSGGVVRVFHIHRGGWTKVIPGMDVSELHYEYAAKKGMPG 307
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTLGF + GIILA DSRA+ I SQ + K + S
Sbjct: 97 GTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEIS 135
>gi|225192958|dbj|BAH29695.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D+ G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDDNGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ D++ EEAY L I HA RD +SGG V +Y I
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNVYHI 248
>gi|325192589|emb|CCA27017.1| proteasome subunit beta type5 putative [Albugo laibachii Nc14]
Length = 294
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 18/197 (9%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
GPF S V ++ ++ IL T+AG AADC +W +L+ +C+ +E + R +++R
Sbjct: 110 GPFIASQKVK-----KINEINEYILATIAGGAADCQFWQRNLSVQCRMFELRNRHRISVR 164
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGT---- 227
A+ L+ N Y+ S +M YD P LY +D+ G + +
Sbjct: 165 AASKLIANTCNYYKQYGMSLG--------MMMMGYDN-GKPTLYYVDDEGSRMRASDKTP 215
Query: 228 KFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+F VGSG+ YA ILD+++R DL++EEA AL AIYHA RD +SGG +Y G+
Sbjct: 216 RFSVGSGSTYAYGILDSNWRWDLTDEEAIALGRKAIYHATHRDAYSGGICNVYMFKEDGY 275
Query: 288 QQVLSRDVKDIYNDRKE 304
+ V+S+DV ++++ K+
Sbjct: 276 RHVVSQDVDEMHDHSKD 292
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F Y GII+A DSR+T I SQK+ K +
Sbjct: 84 FEKGTTTLAFIYQNGIIVAVDSRSTMGPFIASQKVKKINE 123
>gi|389583316|dbj|GAB66051.1| 20S proteasome beta subunit, partial [Plasmodium cynomolgi strain
B]
Length = 268
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 110/189 (58%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ +IL T+AG AADC+YW L K K YE + +++R
Sbjct: 82 GSFISSQNVE-----KIIEINKNILGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVR 136
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 137 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 187
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +L+ E+A LA +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 188 GSGSTYAYSILDSAYDYNLNLEQAVELARNAIYHATFRDGGSGGKVRVFYIHKNGYDKII 247
Query: 292 S-RDVKDIY 299
+DV +++
Sbjct: 248 EGQDVYELH 256
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ +GII+A DSRA+ I SQ + K +
Sbjct: 56 FHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIE 95
>gi|390597775|gb|EIN07174.1| N-terminal nucleophile aminohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 317
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+ L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKYL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP + +D+ G ++G F VGSG+ Y
Sbjct: 166 SNLVYGYKG--------MGLSMGTMICGWDKT-GPAVVYVDSDGTRLKGDLFSVGSGSTY 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++EEA L +IY A RD SG +Y I GW+ + + DV
Sbjct: 217 AYGVLDQGYRWDLTDEEAQELGRRSIYAAGHRDAFSGNTCNVYHIKEDGWKFIGNFDVSQ 276
Query: 298 IYNDRKEAPPG 308
++ + PG
Sbjct: 277 MHYEGAGDVPG 287
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIE 118
>gi|302692828|ref|XP_003036093.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
gi|300109789|gb|EFJ01191.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
Length = 310
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S V T +VI ++ +L T+AG AADC YW L C+ +E + R +++ A+
Sbjct: 104 TAGSYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMHCRLHELRNRERISVSAAS 163
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GPQ++ +D+ G ++G F VGSG
Sbjct: 164 KYLSNLVYSYKG--------MGLSMGTMICGWDKT-GPQIFYVDSDGTRLKGDLFSVGSG 214
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD YR DL++ EA L +IY A RD SG LY + GW+ + + D
Sbjct: 215 STFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNTCNLYHVRENGWEFIGNYD 274
Query: 295 VKDIY 299
+ ++
Sbjct: 275 LSKLH 279
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 83 GTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIE 119
>gi|58268812|ref|XP_571562.1| proteasome component pts1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134113116|ref|XP_774834.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257480|gb|EAL20187.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227797|gb|AAW44255.1| proteasome component pts1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 301
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 12/191 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 106 SYVASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKIL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 166 SNIVYQYK--------GMGLSMGTMVCGWDKT-GPCIFYVDDDGQRLKGDLFSVGSGSTF 216
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS+EEA L +I A RD SG LY + +GW+ + + D+ +
Sbjct: 217 AYGVLDQGYKWDLSDEEAQELGRRSIVAAGHRDAFSGNTCNLYHVRQEGWEFIGNYDINE 276
Query: 298 I---YNDRKEA 305
+ Y +K+A
Sbjct: 277 LWYEYEGKKKA 287
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKVIE 118
>gi|449547489|gb|EMD38457.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 313
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + R +++ A+ L
Sbjct: 106 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNRERISVAAASKFL 165
Query: 178 VNMVRKYRTGNHSSKIPNGLSF--GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGA 235
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+
Sbjct: 166 SNLVSNYKG--------MGLSMVKGTMICGWDKT-GPAIFYVDSDGTRLKGDLFSVGSGS 216
Query: 236 EYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
+A +LD YR DL++EEA L +IY A RD SG + LY + GW+ + + DV
Sbjct: 217 TFAYGVLDQGYRWDLTDEEAQELGRRSIYAAGHRDAFSGNTINLYHVKEDGWRFIGNYDV 276
Query: 296 KDIY 299
+++
Sbjct: 277 SEMH 280
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 82 GTTTLAFRFKGGVIVAVDSRATAGSYVASGTVKKVIE 118
>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+ LL NM+ YR
Sbjct: 102 KVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYR- 160
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP +Y +D G + G F GSG+ YA +LD+ Y
Sbjct: 161 -------GMGLSVGSMICGWDK-EGPGIYYVDANGNRLSGRMFSTGSGSNYAYGVLDSGY 212
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
+ D++ EEAY L I HA RD +SGG V +Y I
Sbjct: 213 KEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHI 248
>gi|426199921|gb|EKV49845.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 311
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC +W L C+ +E + R +++ A+ L
Sbjct: 107 SYVASGTVKKVIEINPYLLGTMAGGAADCQFWETYLGMHCRLHELRNRERISVSAASKYL 166
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 167 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDLFSVGSGSTF 217
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++EEA L +I+ A RD SG LY + +GW + + D+
Sbjct: 218 AYGVLDQGYRWDLTDEEAQELGRRSIFAAGHRDAMSGNTCNLYHVKEEGWDFIGNYDISK 277
Query: 298 IY 299
+Y
Sbjct: 278 MY 279
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 83 GTTTLAFRFKGGVIVAVDSRATAGSYVASGTVKKVIE 119
>gi|409082095|gb|EKM82453.1| hypothetical protein AGABI1DRAFT_111072 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 311
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC +W L C+ +E + R +++ A+ L
Sbjct: 107 SYVASGTVKKVIEINPYLLGTMAGGAADCQFWETYLGMHCRLHELRNRERISVSAASKYL 166
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG+ +
Sbjct: 167 SNLVYSYKG--------MGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDLFSVGSGSTF 217
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR DL++EEA L +I+ A RD SG LY + +GW + + D+
Sbjct: 218 AYGVLDQGYRWDLTDEEAQELGRRSIFAAGHRDAMSGNTCNLYHVKEEGWDFIGNYDISK 277
Query: 298 IY 299
+Y
Sbjct: 278 MY 279
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA + S + K +
Sbjct: 83 GTTTLAFRFKGGVIVAVDSRATAGSYVASGTVKKVIE 119
>gi|387594504|gb|EIJ89528.1| proteasome subunit beta [Nematocida parisii ERTm3]
gi|387596654|gb|EIJ94275.1| proteasome subunit beta [Nematocida parisii ERTm1]
Length = 215
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI V+ +L T+AG AADC YW ++ +E KY + + AA
Sbjct: 35 TSGSYIASQTVNKVIQVNKYLLGTMAGGAADCFYWERAMGNYAMQHELKYGERIPVAGAA 94
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L + Y+ GLS G+++ + GP +Y +D++G + G F VGSG
Sbjct: 95 KYLSATLNAYK--------GRGLSIGSMVCGWGS-SGPAIYYVDDSGNCVNGKLFSVGSG 145
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A IL+T Y+ ++ +E+A LA AI+HA D +SGG V +Y I+ GW +V S+D
Sbjct: 146 SLFAYGILNTGYKYEMDKEDAIELARRAIFHAGHSDAYSGGTVNIYFIDETGWSKVDSQD 205
Query: 295 VKDIYNDRKE 304
V +Y+ E
Sbjct: 206 VSCLYDKYME 215
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT F +GI++A DSRAT+ I SQ +NK Q
Sbjct: 14 GTTTASFITKDGIVVAVDSRATSGSYIASQTVNKVIQ 50
>gi|299115128|emb|CBN75495.1| 20S proteasome beta 5 subunit [Ectocarpus siliculosus]
Length = 264
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 101/198 (51%), Gaps = 26/198 (13%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V T+ +VIPVS IL T+AG AADC +WL L + K +E + M + AA
Sbjct: 56 SMGSFVGSRTTQKVIPVSQHILGTMAGGAADCTFWLRYLGMQAKVFEDRNGFQMPVATAA 115
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDE---------------ILGPQLYMLDN 219
+L + + R GLS GT++ +D G QL+ +D+
Sbjct: 116 RVLADALLGQRG--------KGLSVGTMIMGHDRGNRDSSGRGSVSGGNQGGGQLFYVDS 167
Query: 220 TGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
G ++G F VGSG+ YA ++LD YR +S EEA LA A+ HA RD SGG + +
Sbjct: 168 DGARVKGRYFSVGSGSTYAYSVLDEGYRDGMSLEEAADLAKRAVRHATYRDAFSGGFINV 227
Query: 280 YKINGQGWQQVLSRDVKD 297
+ ++ GW ++ DV D
Sbjct: 228 FVVDASGWTRL---DVDD 242
>gi|393236606|gb|EJD44154.1| proteasome-domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 327
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ +L T+AG AADC YW L +C+ +E + +++ A+
Sbjct: 108 TAGSYIASGTVKKVIEINKFLLGTMAGGAADCQYWETYLGIQCRLHELRNGERISVAAAS 167
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG
Sbjct: 168 KYLSNLVYGYKG--------MGLSMGTMICGWDKT-GPAVFYVDSDGTRLKGDVFSVGSG 218
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD YR DL++ EA L +IY A RD SG + LY + GW+ + + D
Sbjct: 219 STFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNTINLYHVRENGWEFIANYD 278
Query: 295 VKDIYNDRKEA----PPGGG 310
V ++ D A P GG
Sbjct: 279 VTKMHYDGPGAGVPGAPAGG 298
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ G+I+A DSRATA I S + K +
Sbjct: 87 GTTTLAFRFQGGVIVAVDSRATAGSYIASGTVKKVIE 123
>gi|350538201|ref|NP_001232086.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
gi|197129152|gb|ACH45650.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ +L T+AG AADC +W +A++C+ E + + +++ A+ LL N+V +Y+
Sbjct: 109 KVLPIGGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKG 168
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD
Sbjct: 169 --------LGLSLGTMLCGWDK-RGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGL 219
Query: 247 -RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
SEE A LA AI A RD +SGGCVR+ + +GW++V D+ ++ +
Sbjct: 220 AAAARSEEAACELARRAIAQAAHRDAYSGGCVRVMHVGPEGWREVSHDDIAELQD 274
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
+ GTTTL F+ P G+ +A DSRATA I SQ + K
Sbjct: 73 ILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRK 109
>gi|197129151|gb|ACH45649.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ +L T+AG AADC +W +A++C+ E + + +++ A+ LL N+V +Y+
Sbjct: 109 KVLPIGGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKG 168
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD
Sbjct: 169 --------LGLSLGTMLCGWDK-RGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGL 219
Query: 247 -RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
SEE A LA AI A RD +SGGCVR+ + +GW++V D+ ++ +
Sbjct: 220 AAAARSEEAACELARRAIAQAAHRDAYSGGCVRVMHVGPEGWREVSHDDIAELQD 274
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
+ GTTTL F+ P G+ +A DSRATA I SQ + K
Sbjct: 73 ILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRK 109
>gi|225193002|dbj|BAH29631.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193017|dbj|BAH29641.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSSYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|225192964|dbj|BAH29691.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|150247151|ref|NP_001092856.1| proteasome subunit beta type-11 [Bos taurus]
gi|148877297|gb|AAI46055.1| PSMB11 protein [Bos taurus]
gi|296483653|tpg|DAA25768.1| TPA: proteasome beta 11 subunit [Bos taurus]
Length = 289
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADCV W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTCLQGNIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RRD +SGG V L+ + GW+ V D +Y++ ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATRRDAYSGGSVDLFHVRESGWEYVSRHDAWVLYSELQK 250
Query: 305 AP 306
P
Sbjct: 251 LP 252
>gi|328849031|gb|EGF98220.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 296
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + ++ +++ A+ L
Sbjct: 101 SYIASGTVKKVIEINPFLLGTMAGGAADCQYWETYLGMQCRLHELRNKSRISVAAASKHL 160
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP LY +D+ G ++G F VGSG+ +
Sbjct: 161 SNLVYSYKG--------MGLSMGTMICGWDKS-GPALYYVDSDGTRLKGDCFSVGSGSTF 211
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y DL EEA L +IY A RD SG + LY + GWQ + + D
Sbjct: 212 AYGVLDQGYHWDLEVEEALELGRRSIYAAGHRDAFSGNTLNLYHVKEDGWQFIGNYDFNK 271
Query: 298 IYND 301
++ D
Sbjct: 272 LHYD 275
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GI++A DSRATA I S + K +
Sbjct: 77 GTTTLAFRFKHGIVVAVDSRATAGSYIASGTVKKVIE 113
>gi|213410533|ref|XP_002176036.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
gi|212004083|gb|EEB09743.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
Length = 274
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP S TV +VI ++ +L T+AG AADC +W L EC+ ++ + +++
Sbjct: 83 AGPLVASQTVK-----KVIEINPYLLGTMAGGAADCQFWETVLGMECRLHQLRNHELISV 137
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L +V Y+ GLS GT++A + G L+ +D+ G +EG F
Sbjct: 138 SSASKILSTIVYSYK--------GYGLSMGTMLAGTGK-GGTALFYIDSDGTRLEGDLFS 188
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ +A +LD YR DLS+EEA L +I A RD +SGG + LY I+ +GW+
Sbjct: 189 VGSGSTFAYGVLDAGYRWDLSKEEALYLGKRSILAATHRDAYSGGTINLYHIDEEGWKFH 248
Query: 291 LSRDVKDIYNDRK 303
+ DV ++ + K
Sbjct: 249 GNFDVDELIWETK 261
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY GI++ DSRA+A L+ SQ + K +
Sbjct: 61 GTTTLAFRYKHGIVVCVDSRASAGPLVASQTVKKVIE 97
>gi|218552|dbj|BAA02403.1| proteasome subunit pts1+ [Schizosaccharomyces pombe]
gi|742350|prf||2009376A proteasome:SUBUNIT=pts1
Length = 215
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP S TV +VI ++ +L TLAG AADC +W L EC+ ++ + + +++
Sbjct: 26 AGPLIASQTVK-----KVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISV 80
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L N+ Y+ GLS GT++A + G LY +D+ G ++G F
Sbjct: 81 SAASKILSNITYSYK--------GYGLSMGTMLAGTGK-GGTALYYIDSDGTRLKGDLFS 131
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
VGSG+ +A +LD+ YR DLS++EA LA +I A RD +SGG V LY I+ GW
Sbjct: 132 VGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGWVFH 191
Query: 291 LSRDVKDIYNDRKE 304
+ DV + + K+
Sbjct: 192 GNFDVDSLIWEAKD 205
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY GI++ DSRA+A LI SQ + K +
Sbjct: 4 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIE 40
>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii 17XNL]
gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
Length = 287
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ IL T+AG AADC YW L + K YE + +++R
Sbjct: 82 GSFISSQNVE-----KIIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVR 136
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 137 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 187
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +LS E+A L +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 188 GSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHKNGYSKII 247
Query: 292 S-RDVKDIY 299
DV D++
Sbjct: 248 EGEDVYDLH 256
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ EGII+A DSRA+ I SQ + K +
Sbjct: 56 FHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIE 95
>gi|429961885|gb|ELA41429.1| hypothetical protein VICG_01534 [Vittaforma corneae ATCC 50505]
Length = 239
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW K YE + T ++ A+ L
Sbjct: 62 SYIASQTVNKVIEINKYLLGTMAGGAADCYYWEKLTGLYAKRYELENGTRISAAAASMFL 121
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N V +Y+ GLS T++ YD+ GPQ+Y + + G I+ F VGSG+
Sbjct: 122 SNCVYRYK--------GYGLSMSTMLCGYDKD-GPQIYNVTDQGARIKNHIFSVGSGSTI 172
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A IL Y+ D+++EEA AL AI++A RD +SGG V LY +N GW+++ + + +
Sbjct: 173 ALGILSARYKYDMTKEEALALGKDAIFYAGHRDAYSGGSVNLYFMNHNGWEKIGNFEFET 232
Query: 298 IYNDRK 303
I N+++
Sbjct: 233 IRNEKE 238
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRATA I SQ +NK +
Sbjct: 38 GTTTLAFIFKEGMVIAVDSRATAGSYIASQTVNKVIE 74
>gi|19114737|ref|NP_593825.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe 972h-]
gi|3123252|sp|P30655.3|PSB5_SCHPO RecName: Full=Probable proteasome subunit beta type-5; AltName:
Full=Macropain subunit pts1; AltName:
Full=Multicatalytic endopeptidase complex subunit pts1;
AltName: Full=Proteasome component pts1; Flags:
Precursor
gi|4490651|emb|CAB11483.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe]
Length = 272
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 14/177 (7%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP S TV +VI ++ +L TLAG AADC +W L EC+ ++ + + +++
Sbjct: 83 AGPLIASQTVK-----KVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISV 137
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L N+ Y+ GLS GT++A + G LY +D+ G ++G F
Sbjct: 138 SAASKILSNITYSYK--------GYGLSMGTMLAGTGK-GGTALYYIDSDGTRLKGDLFS 188
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
VGSG+ +A +LD+ YR DLS++EA LA +I A RD +SGG V LY I+ GW
Sbjct: 189 VGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGW 245
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY GI++ DSRA+A LI SQ + K +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIE 97
>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 14/190 (7%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S +++ + +++ ++ +L T+AG AADC +W +L C+ +E + +++ A+
Sbjct: 38 SMGNSISSQSVKKILEINPYLLGTMAGGAADCQFWQRNLGTRCRLHELANKRHISVTGAS 97
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N + YR GL GT++A +DE GP LY +D+ G ++GT+F VGSG
Sbjct: 98 KLLANTLYSYR--------GMGLFMGTMIAGWDET-GPGLYYVDSEGGRVKGTRFSVGSG 148
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKIN----GQGWQQV 290
+ YA +LDT ++ D+S +EA LA +IYHA RD SGG V L K + GW+++
Sbjct: 149 STYAYGVLDTVFKQDMSIDEAVELARRSIYHATLRDGASGG-VTLLKCSLLCGPSGWKKM 207
Query: 291 LSRDVKDIYN 300
D ++++
Sbjct: 208 SGDDGGELHH 217
>gi|160331155|ref|XP_001712285.1| prsB5 [Hemiselmis andersenii]
gi|159765732|gb|ABW97960.1| prsB5 [Hemiselmis andersenii]
Length = 219
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VIP++ +L T+AG AADC +W +L C YE + + ++I A+ + NM+ KY+
Sbjct: 50 KVIPINDYMLGTMAGGAADCFFWERNLGIICHLYELQNQHKISISGASKIFTNMIYKYKN 109
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+GLS G ++ +D+ GP L+ +D+ I+ VGSG+ +A ILD+ Y
Sbjct: 110 --------SGLSIGAMIIGWDQT-GPGLFYVDSEANRIKIKMISVGSGSTFAFGILDSGY 160
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
+ +LS +E L ++I+HA +D +SGG + Y + GW ++ S D+
Sbjct: 161 KWNLSLKEGIELGKNSIFHAAFKDAYSGGKINSYLVRNNGWIKIASEDI 209
>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDHNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N + +VI ++ +L T++G+AADC YW LAKEC+ Y+ + +++ A+
Sbjct: 89 SAGNYLASNDANKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS 148
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 149 KLLCNMMLGYR--------GMGLSMGSMICGWDK-EGPGLYYVDHNGTRLSGRMFSTGCG 199
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 200 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 247
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 68 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIE 104
>gi|300709258|ref|XP_002996795.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
gi|239606120|gb|EEQ83124.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
Length = 229
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + +VI ++ ++ T+AG A+DC +W + K YE K +++ A+
Sbjct: 53 SAGSYIASQNVHKVIRINKYLIGTMAGGASDCYFWEKKMGLYAKSYELKNDKRISVSAAS 112
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N V +Y+ GLS G+++ YD P +Y +DN G I G+ F VGSG
Sbjct: 113 MFLSNCVYQYK--------GRGLSLGSMVCGYDGD-KPLIYYVDNDGKRISGSLFSVGSG 163
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A +L+ Y+ DL+++EA L AI+HA RD +SGG V LY ++ GW V + D
Sbjct: 164 STIAYGVLNESYKFDLNKDEALELGKKAIWHATHRDAYSGGNVNLYFMDKNGWDHVGTFD 223
Query: 295 V 295
V
Sbjct: 224 V 224
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+A I SQ ++K +
Sbjct: 32 GTTTLAFIFQEGMVIAVDSRASAGSYIASQNVHKVIR 68
>gi|256085670|ref|XP_002579037.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
gi|360043676|emb|CCD81222.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
Length = 518
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 68 RSHCVAETQQDHFLSPPLSQSSQHIISGDSCE-----------LLHPVYTGGERCGPFSQ 116
RS C T+ D + S + I G C+ L Y+GG S+
Sbjct: 22 RSVCTHLTEVDLYRSQKAENYLKPIEYGIQCKETKINFFHGTTTLALKYSGGVIVATDSR 81
Query: 117 SSTVPH---NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHA 173
++ P+ T+ ++I ++ +L T+AG AADC +W LAK C+ +E + + +++ A
Sbjct: 82 ATAGPYIASGTTKKIIEINKYLLGTMAGGAADCQFWERVLAKHCRLFELRNKERISVAAA 141
Query: 174 ANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGS 233
+ LL N+V Y+ GLS GT + +D+ G +Y +D G G F VGS
Sbjct: 142 SKLLANIVYNYKG--------MGLSIGTTIVGWDKN-GSGIYYVDTDGNRTPGNLFSVGS 192
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
G+ YA +LDT Y+ ++S+E+AY LA +I+HA RD SGG V
Sbjct: 193 GSPYAYGVLDTGYKYEMSDEDAYELARRSIFHATHRDAASGGFV 236
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL +Y G+I+ATDSRATA I S K +
Sbjct: 59 FFHGTTTLALKYSGGVIVATDSRATAGPYIASGTTKKIIE 98
>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGRRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|145508045|ref|XP_001439972.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407178|emb|CAK72575.1| unnamed protein product [Paramecium tetraurelia]
Length = 268
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 16/164 (9%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T+AG AADC YWL LA C+ YE K + +++ A+ L ++ Y+
Sbjct: 90 KVIEINEYLLGTMAGGAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYKN 149
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+GLS G ++A D + G LY +DN G+ ++G F VGSG+ YA Y
Sbjct: 150 --------SGLSMGCMIAGTD-LSGQHLYYIDNDGMRLKGDIFSVGSGSTYA-------Y 193
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
LS EA L AIYHA RD SGG VR+Y I+ GW +V
Sbjct: 194 DMILSLTEAVELGVRAIYHATHRDTASGGVVRVYHIHQNGWTKV 237
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF + EGI+LA DSRA+ + S+++ K +
Sbjct: 54 FKHGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIE 93
>gi|323306838|gb|EGA60123.1| Pre2p [Saccharomyces cerevisiae FostersO]
Length = 168
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 139 LAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLS 198
+AG AADC +W L +C+ +E + + +++ A+ +L N+V +Y+ GLS
Sbjct: 1 MAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGA--------GLS 52
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
GT++ Y GP +Y +D+ G ++G FCVGSG +A +LD++Y+ DLS E+A L
Sbjct: 53 MGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYL 112
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+I A RD +SGG V LY + GW + DV +++ KE
Sbjct: 113 GKRSILAAAHRDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKE 158
>gi|403335952|gb|EJY67163.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 310
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ N +VI ++ +L T+AG AADC++W +A +C+ YE + ++ A+ +L +
Sbjct: 116 ISSNNVRKVIEINDFLLGTMAGGAADCMFWEKYVAMQCRVYELRNGEKPSVAMASMMLAS 175
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++R+YR GLS GT+ D+ G LY +D+ + G F VGSG +A
Sbjct: 176 IMRQYR--------GQGLSMGTMFTGSDKT-GASLYYIDDDATRLRGRLFAVGSGGTFAY 226
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG-WQQV 290
+LDT+YR D+S +EA L AI A +D SGG VR+Y + +G W +
Sbjct: 227 GVLDTNYRYDMSLDEAVQLGIRAITSATYKDSASGGVVRIYHVTNKGKWDLI 278
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F + EG+++A D+RAT I S + K +
Sbjct: 87 FAKGTTTLAFEFAEGVLVAVDARATMGAFISSNNVRKVIE 126
>gi|386868059|dbj|BAM15299.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 202
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G+AADC YW LAK+C+ Y+ + + +++ A+ LL NM+ +YR
Sbjct: 55 KVIEINPYLLGTMSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEYR- 113
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F G G YA ++D+ Y
Sbjct: 114 -------GMGLSMGSMICGWDK-KGPGLYYVDDNGTRLSGNMFSTGCGNCYAYGVVDSGY 165
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
R DL EEA LA AIYHA RD ++GG V +Y +
Sbjct: 166 RYDLGVEEACDLARRAIYHATHRDAYTGGFVNMYHM 201
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S NK +
Sbjct: 22 GTTTLAFKFEHGVIVAVDSRASAGNYLASVDANKVIE 58
>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 91 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 151 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 201
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 202 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 249
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 70 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 106
>gi|440906309|gb|ELR56585.1| Proteasome subunit beta type-11 [Bos grunniens mutus]
Length = 289
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 98/182 (53%), Gaps = 9/182 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADCV W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RRD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARRAVAHATRRDAYSGGSVDLFHVRESGWEYVSRHDAWVLYLELQK 250
Query: 305 AP 306
P
Sbjct: 251 LP 252
>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|126278096|ref|XP_001379947.1| PREDICTED: proteasome subunit beta type-11-like [Monodelphis
domestica]
Length = 261
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
+S +VIPV ++ T +G +ADC W L +E + + ++ AA LL +M+
Sbjct: 77 SSQKVIPVHQHLIGTTSGTSADCATWYRILQRELRLRALREGQLPSVAGAAKLLSSMLFH 136
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR GL T + +D+ GP L+ + + G L+ G F VGSG+ YA ++D
Sbjct: 137 YRG--------LGLCVATALCGWDQA-GPALFYVYSDGTLLSGDVFSVGSGSPYAYGVMD 187
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR D++ EEAY LA A+ HA RRD +SGG V LY + GW++V D +Y +
Sbjct: 188 RGYRYDMTIEEAYTLARQAVAHATRRDAYSGGSVDLYHVKASGWERVSREDACVLYFRLQ 247
Query: 304 E 304
E
Sbjct: 248 E 248
>gi|392573954|gb|EIW67092.1| hypothetical protein TREMEDRAFT_34309 [Tremella mesenterica DSM
1558]
Length = 287
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L C+ YE + + +++ A+ +L
Sbjct: 93 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMRCRLYELRNKERISVAAASKIL 152
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D+ GP L+ +D+ G ++G F VGSG+ +
Sbjct: 153 SNIVYGYKG--------RGLSMGTMICGWDKT-GPALFYVDSEGQRLKGDLFSVGSGSTF 203
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A +LD Y DLS+EEA L +I A RD SG LY + GW+ + + DV
Sbjct: 204 AYGVLDQGYSYDLSDEEAQELGRRSIIAAGHRDAFSGNTCNLYHVRENGWEFIGNYDV 261
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 69 GTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKKVIE 105
>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|68069847|ref|XP_676835.1| 20S proteasome beta subunit [Plasmodium berghei strain ANKA]
gi|56496705|emb|CAH96419.1| 20S proteasome beta subunit, putative [Plasmodium berghei]
Length = 269
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Query: 112 GPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
G F S V ++I ++ IL T+AG AADC YW L + K YE + +++R
Sbjct: 81 GSFISSQNVE-----KIIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVR 135
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV 231
A+ +L N++ +Y+ GL G +++ YD G ++ +D+ G +EG F
Sbjct: 136 AASTILSNILYQYK--------GYGLCCGIILSGYDHT-GFNMFYIDDEGKKVEGNLFSC 186
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ YA +ILD+ Y +LS ++A L +AIYHA RD SGG VR++ I+ G+ +++
Sbjct: 187 GSGSTYAYSILDSAYDYNLSVDQAVELGRNAIYHATFRDGGSGGKVRVFYIHKNGYSKII 246
Query: 292 S-RDVKDIY 299
DV D++
Sbjct: 247 EGEDVYDLH 255
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F++ EGII+A DSRA+ I SQ + K +
Sbjct: 55 FHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIE 94
>gi|194764045|ref|XP_001964142.1| GF21399 [Drosophila ananassae]
gi|190619067|gb|EDV34591.1| GF21399 [Drosophila ananassae]
Length = 293
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 15/177 (8%)
Query: 128 VIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTG 187
VI +S S+L T+AG AADC YWL L +EC+ E +Y+ +++ + ++ N+ ++R
Sbjct: 103 VIEISDSMLATMAGRAADCTYWLRVLRRECRLQELRYKQTLSVTATSKIIFNICYRHR-- 160
Query: 188 NHSSKIPNGLSFGTLMAAY----DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
GL G ++A + DE+ +LY +D+ G +G F VGSG+E A ILD
Sbjct: 161 ------KRGLDLGVILAGHGGVKDEL---ELYYVDSDGYRQKGKLFSVGSGSEVAYRILD 211
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
+Y ++ +E + L AIY + +D SGG V +Y++ GW+ + D D++
Sbjct: 212 AEYDWEMKDEVVHELVQRAIYSSALQDAISGGSVVVYQVTQLGWKMISETDCADLHE 268
>gi|225193059|dbj|BAH29669.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ + + +++ A+
Sbjct: 91 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLFRLRNNHRISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 151 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 201
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 202 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 249
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 70 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 106
>gi|225192999|dbj|BAH29629.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193011|dbj|BAH29637.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G+AADC YW LAKEC+ + + +++ A+
Sbjct: 91 SAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLFRLRNNHRISVAAAS 150
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 151 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 201
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D++ EEAY L I HA RD +SGG V +Y +
Sbjct: 202 NSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 249
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 70 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 106
>gi|378756625|gb|EHY66649.1| proteasome subunit beta type [Nematocida sp. 1 ERTm2]
Length = 214
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI V+ +L T+AG AADC YW ++ +E KY + + AA
Sbjct: 35 TSGSYIASQTVNKVIQVNKYLLGTMAGGAADCFYWERAMGDYAMKHELKYGERIPVAGAA 94
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L + Y+ GLS G+++ + GP +Y +D++G I G F VGSG
Sbjct: 95 KYLSATLNAYK--------GRGLSIGSMVCGWGST-GPAIYYVDDSGNCINGKLFSVGSG 145
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A IL+ Y ++ +E+A LA AI+HA D +SGG V +Y I+ GW ++ S+D
Sbjct: 146 SLFAYGILNPGYSYEMEKEDAIELARRAIFHAGHSDAYSGGTVNIYFIDENGWTKIDSQD 205
Query: 295 VKDIYN 300
V +Y+
Sbjct: 206 VSCLYD 211
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT F +GI++A DSRAT+ I SQ +NK Q
Sbjct: 14 GTTTASFITKDGIVVAVDSRATSGSYIASQTVNKVIQ 50
>gi|393220434|gb|EJD05920.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 307
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T +VI ++ +L T+AG AADC +W L +C+ +E + +++ A+
Sbjct: 102 TAGSYIASGTVKKVIEINKFLLGTMAGGAADCQFWETYLGMQCRLHELRNHERISVAAAS 161
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GP ++ +D+ G ++G F VGSG
Sbjct: 162 KYLCNLVYSYK--------GTGLSMGTMICGWDKT-GPAVFYVDSDGQRLKGDLFSVGSG 212
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD Y DL+++EA L +IY A RD SG + +Y + GW + + D
Sbjct: 213 STFAYGVLDQGYHWDLTDDEAIELGRRSIYAAGHRDAFSGNTINVYHVKEDGWTFIGNYD 272
Query: 295 VKDIYNDRKEAPPG 308
V ++ + PG
Sbjct: 273 VSKMHYEGSGNVPG 286
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY G+I+A DSRATA I S + K +
Sbjct: 81 GTTTLAFRYQGGVIVAVDSRATAGSYIASGTVKKVIE 117
>gi|336369943|gb|EGN98284.1| hypothetical protein SERLA73DRAFT_183200 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382704|gb|EGO23854.1| hypothetical protein SERLADRAFT_470232 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + T +VI ++ +L T+AG AADC YW L C+ +E + R +++ A+
Sbjct: 103 SAGSYIGSGTVKKVIEINPYLLGTMAGGAADCQYWEMYLGMHCRLHELRNRERISVAAAS 162
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N+V Y+ GLS GT++ +D+ GP LY +D G ++G F VGSG
Sbjct: 163 KYLSNLVYSYKG--------TGLSMGTMICGWDKT-GPALYYVDADGTRLKGDLFSVGSG 213
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD Y+ L++EEA L +IY A RD +G LY + +GW + + D
Sbjct: 214 STFAYGVLDQGYKWGLTDEEAQELGRRSIYAAGHRDAFTGNSCNLYHVKEEGWCFIGNYD 273
Query: 295 VKDIY 299
+ ++
Sbjct: 274 LSQLH 278
>gi|225193053|dbj|BAH29665.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + N +VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+
Sbjct: 92 SAGNYLASNDVNKVIEINPYLLGTMSGGAADCQYWERLLAKECRLYRLRNNHRISVAAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ YR GLS G+++ +D+ GP LY +D+ G + G F G G
Sbjct: 152 KLLCNMMLGYR--------GMGLSVGSMICGWDK-EGPGLYYVDDNGTRLSGRMFSTGCG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
YA ++D+ Y+ D+ EEAY L I HA RD +SGG V +Y +
Sbjct: 203 NSYAYGVVDSGYKEDMIVEEAYELGCRGIAHATHRDAYSGGSVNMYHM 250
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + + S +NK +
Sbjct: 71 GTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIE 107
>gi|403173929|ref|XP_003332961.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170757|gb|EFP88542.2| 20S proteasome subunit beta 5 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 289
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + ++ +++ A+ L
Sbjct: 98 SYIASGTVKKVIEINPFLLGTMAGGAADCQYWETYLGIQCRLHELRNKSRISVAAASKYL 157
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V Y+ GLS GT++ +D GP LY +D+ G ++G F VGSG+ +
Sbjct: 158 SNLVYSYK--------GMGLSMGTMICGWDGA-GPGLYYVDSDGTRLKGDVFSVGSGSTF 208
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y DLS ++A L +IY A RD SG + LY + GW + + D
Sbjct: 209 AYGVLDQGYHWDLSVDDALELGRRSIYAAGHRDAFSGNTLNLYHVKEDGWHFINNYDFNK 268
Query: 298 IYND 301
++ D
Sbjct: 269 LHYD 272
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 74 GTTTLAFRFQHGIIVAVDSRATAGSYIASGTVKKVIE 110
>gi|388582767|gb|EIM23071.1| 20S proteasome subunit, partial [Wallemia sebi CBS 633.66]
Length = 288
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ L
Sbjct: 87 SYVASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGIQCRLHELRNKERISVAAASKYL 146
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+ Y+ GLS GT++ +D+ GP ++ +D+ G G F VGSG+ +
Sbjct: 147 SNITYSYK--------GKGLSMGTMICGWDK-GGPAIWYVDSDGSRTSGNVFSVGSGSTF 197
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y+ DLS++EA L +IY A RD +SG + LY + GW + D+ +
Sbjct: 198 AYGVLDQGYKYDLSDDEALELGRRSIYAAGHRDAYSGNTINLYIVKESGWTHKGTIDISE 257
Query: 298 IY 299
++
Sbjct: 258 LH 259
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA + S + K +
Sbjct: 63 GTTTLAFKFKGGVIVAVDSRATAGSYVASGTVKKVIE 99
>gi|41352687|gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica napus]
Length = 150
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 9/144 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AAD +W +L +C+ +E + +++ A+ LL NM+ YR
Sbjct: 14 KIIEINPYMLGTMAGGAADRQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRG 73
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++A +DE GP LY +DN G ++G +F VGSG+ YA +LD+ Y
Sbjct: 74 --------MGLSVGTMIAGWDET-GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 124
Query: 247 RPDLSEEEAYALATSAIYHACRRD 270
+ D+S EEA LA +IYHA RD
Sbjct: 125 KFDMSVEEASELARRSIYHATFRD 148
>gi|395745698|ref|XP_003778316.1| PREDICTED: proteasome subunit beta type-11 [Pongo abelii]
Length = 300
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELRDGQLPSVASAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDH 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATYRDAYSGGSVDLFHVRESGWEHVSRSDACVLY 245
>gi|330039093|ref|XP_003239785.1| 26S proteasome SU B5 [Cryptomonas paramecium]
gi|327206710|gb|AEA38887.1| 26S proteasome SU B5 [Cryptomonas paramecium]
Length = 234
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + N +VI ++S L T+AG AADC +W +L C YE + ++I A+
Sbjct: 46 SMGKYIGSNKVKKVIEINSFFLGTMAGGAADCFFWERNLGCLCDLYEMQNNQHVSISGAS 105
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL NM+ ++ +GLS G ++A +D GP++Y +D+ G VGSG
Sbjct: 106 KLLANMIYVHKN--------SGLSIGAIIAGWDH-NGPEIYFIDSEGSRFRINIVSVGSG 156
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW----QQV 290
+ YA ILDTDY+ ++S E A + +I+ + +D SGG V LY I GW V
Sbjct: 157 STYAYGILDTDYKWNISIETACNIGKRSIFQSSYKDPFSGGSVNLYFIRKDGWIRISSDV 216
Query: 291 LSRDVKDIYNDRKEA 305
++ D+ YN + +
Sbjct: 217 INLDMFKKYNKKNNS 231
>gi|253745395|gb|EET01350.1| Proteasome subunit beta type 5 precursor [Giardia intestinalis ATCC
50581]
Length = 294
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q V +VI ++ IL T+AG A DC +W L ++C+ YE + + A+
Sbjct: 103 TQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDLGRKCRLYELENGERIYASSAS 162
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L ++ + S+ +S G +++ +D P +Y D+ G I G + GSG
Sbjct: 163 KLFISTLH--------SQSGTDMSVGAMISGFDSTNHPCIYYCDSEGTRIGGYLYGAGSG 214
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A I+DT+Y +++EE+A AL AIYHA RD SGG + +Y I GW+ VL+ D
Sbjct: 215 STFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNIYVIRPSGWEHVLAMD 274
Query: 295 VKDIY 299
+ Y
Sbjct: 275 NYEYY 279
>gi|219125785|ref|XP_002183153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405428|gb|EEC45371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 101 LHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKEC 157
L V+ GG S++S V T+ +V+P++S +L T+AG AADC +W+ L E
Sbjct: 10 LSFVFQGGIVAAVDSRASLGSFVGSKTTQKVLPINSHMLGTMAGGAADCSFWIRKLQGEA 69
Query: 158 KGYECKYR-TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILG----P 212
+ M++ A+ LL N + R GLS GT++ +D+
Sbjct: 70 AMHVLTLDGRRMSVARASRLLSNALYDNR--------KLGLSVGTMVMGFDDTETKSSRA 121
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+++ +DN+G IEG F VGSG+ +A ILDT+ R DL+ +EA AL AI HA RD +
Sbjct: 122 RIFYVDNSGTRIEGDVFAVGSGSTFALGILDTEKRHDLTVDEAVALGLKAIRHATFRDAY 181
Query: 273 SGGCVRLYKINGQ-GW 287
SGG + +Y I + GW
Sbjct: 182 SGGFINVYLITHEHGW 197
>gi|444728808|gb|ELW69250.1| Proteasome subunit beta type-11 [Tupaia chinensis]
Length = 295
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
S +VIPV +L T +G +ADC W L +E + + ++ AA LL M+ +
Sbjct: 75 ASRKVIPVHRHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSR 134
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 135 YRGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLD 185
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + +
Sbjct: 186 RGYRYDMTTQEAYALARRAVAHATHRDAYSGGSVDLFHVRESGWEYVSRGDACVLYAELR 245
Query: 304 EAP 306
+ P
Sbjct: 246 KLP 248
>gi|308160078|gb|EFO62585.1| Proteasome subunit beta type 5 precursor [Giardia lamblia P15]
Length = 294
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q V +VI ++ IL T+AG A DC +W L ++C+ YE + + A+
Sbjct: 103 TQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDLGRKCRLYELENGERIYASSAS 162
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L ++ + S+ +S G +++ +D P +Y D+ G I G + GSG
Sbjct: 163 KLFISTLH--------SQSGADMSVGAMISGFDSTNHPCIYYCDSEGTRIGGYLYGAGSG 214
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A I+DT+Y +++EE+A AL AIYHA RD SGG + +Y I GW+ VL+ D
Sbjct: 215 STFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNVYVIRPNGWEHVLAMD 274
Query: 295 VKDIY 299
+ Y
Sbjct: 275 NYEYY 279
>gi|159109800|ref|XP_001705163.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
50803]
gi|157433243|gb|EDO77489.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
50803]
Length = 294
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q V +VI ++ IL T+AG A DC +W L ++C+ YE + + A+
Sbjct: 103 TQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDLGRKCRLYELENGERIYASSAS 162
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L ++ + S+ +S G +++ +D P +Y D+ G I G + GSG
Sbjct: 163 KLFISTLH--------SQSGADMSVGAMISGFDSTNHPCIYYCDSEGTRIGGYLYGAGSG 214
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A I+DT+Y +++EE+A AL AIYHA RD SGG + +Y I GW+ VL+ D
Sbjct: 215 STFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNVYVIRPGGWEHVLAMD 274
Query: 295 VKDIY 299
+ Y
Sbjct: 275 NYEYY 279
>gi|195055624|ref|XP_001994713.1| GH14538 [Drosophila grimshawi]
gi|193892476|gb|EDV91342.1| GH14538 [Drosophila grimshawi]
Length = 275
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I V +IL T AG A DC +W +L +EC+ +E Y M + A+ ++ NM+ ++R
Sbjct: 89 KIIVVHKNILGTFAGCAGDCAFWCRALTRECRLFELNYGHCMPVIIASKMMSNMMYRFRD 148
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
L G ++A YD + G +L +D+ G E VGSG YA ++ Y
Sbjct: 149 LE--------LYMGMMLAGYDPVDGAKLIYVDSEGSHEEVNCHVVGSGEVYASGLIKRFY 200
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR---DVKDIYNDRK 303
+ DL +EAY LA + I++A + D H+GG + LY + GW V + ++ +I+ D+
Sbjct: 201 KWDLGNDEAYNLALNVIHNASQMDWHTGGPISLYHMRQDGWSCVTKKTPQELNEIFADQA 260
Query: 304 EAPPGG 309
P G
Sbjct: 261 NYPYSG 266
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
GTTTLGF+Y GIIL+ +SR T + I S + K
Sbjct: 56 GTTTLGFKYQGGIILSAESRVTNEESISSTSMEKI 90
>gi|395859281|ref|XP_003801968.1| PREDICTED: proteasome subunit beta type-11 [Otolemur garnettii]
Length = 300
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V S +VIPV +L T +G +ADC W L +E + + ++ AA LL
Sbjct: 73 SYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLL 132
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
M+ +YR + L T + +D GP L+ + + G ++G F VGSG+ Y
Sbjct: 133 SAMMSRYRGLD--------LCVATALCGWD-CSGPALFYVYSDGTRLQGDIFSVGSGSPY 183
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD YR D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D
Sbjct: 184 AYGVLDRGYRYDMTTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACV 243
Query: 298 IYNDRKE 304
+Y + +E
Sbjct: 244 LYKELQE 250
>gi|345488887|ref|XP_003426004.1| PREDICTED: proteasome subunit beta type-5-like, partial [Nasonia
vitripennis]
Length = 225
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW LAK+C+ YE + R+ ++I A+ L+ NMV Y+
Sbjct: 105 KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRMYELRNRSRISIAAASKLMSNMVYNYK- 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A +D+ GP LY +D+ G G F VGSG+ +A +LD+ Y
Sbjct: 164 -------GMGLSIGMMIAGWDK-RGPGLYYVDSEGTRTPGKVFSVGSGSVFAYGVLDSGY 215
Query: 247 RPDLSEEEAY 256
R DL++EEAY
Sbjct: 216 RWDLTDEEAY 225
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y GI+L+ DSRAT I SQ + K +
Sbjct: 69 FDHGTTTLGFMYQGGIVLSVDSRATGGQFIGSQVMKKIVE 108
>gi|194207140|ref|XP_001918357.1| PREDICTED: proteasome subunit beta type-11-like [Equus caballus]
Length = 299
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + + ++ AA LL M+ Y
Sbjct: 80 SRKVIPVHQHLLSTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSHY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y++ ++
Sbjct: 191 GYRYDMTTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDAWVLYSELQK 250
>gi|170595731|ref|XP_001902498.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158589802|gb|EDP28656.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 277
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + +T +T+ A+
Sbjct: 83 SAGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTEITVAAAS 142
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N++ YR NH GLS G+++A YD+ GP ++ +D+ G I+ +GSG
Sbjct: 143 KYFQNVLYSYR--NH------GLSVGSMIAGYDK-RGPAIFKVDSEGQRIQLRLCSIGSG 193
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A ILD YRP +++EEAY L I HA RD SGG + I+ + + D
Sbjct: 194 SLSAYGILDNFYRPKMTDEEAYKLGRRGIMHATYRDTGSGGVCNMVHISPTEKIRFPAFD 253
Query: 295 VKDIY 299
V +Y
Sbjct: 254 VSQLY 258
>gi|410928748|ref|XP_003977762.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
Length = 299
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 98/173 (56%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ P+ S ++ T +G+ ADC+ W L +E + Y+ ++ ++IR A LL M+ ++
Sbjct: 118 KISPIHSHLVVTCSGSGADCMMWRRILTRETRLYQLRHGRCLSIRGTAKLLSFMLHPFKG 177
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ ++ +D+ GP+L + + G ++G F VGSG+ YA +LD +
Sbjct: 178 TE--------VCVALILCGWDKD-GPKLIYVCSDGARLQGDLFSVGSGSPYAYGVLDREQ 228
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R +LS+EEA++LA A++ A RD +SG V L+ I QGWQ+ D+K+ Y
Sbjct: 229 RWNLSKEEAFSLAREAVFRATHRDAYSGNNVDLFHITDQGWQKKERVDLKEEY 281
>gi|351697093|gb|EHB00012.1| Proteasome subunit beta type-11 [Heterocephalus glaber]
Length = 300
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
TS +VIPV +L T +G +ADC W L +E + + ++ AA LL M+ +
Sbjct: 79 TSLKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSR 138
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 139 YRGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLD 189
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
Y D++ +EAY LA A+ HA RD +SGG V L+ + GW+ V D +Y + +
Sbjct: 190 RGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDTCVVYRELQ 249
Query: 304 EAP 306
P
Sbjct: 250 MFP 252
>gi|148699224|gb|EDL31171.1| mCG118255 [Mus musculus]
Length = 219
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 85 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRKKERISVAAASKLLAN 144
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G I GT F VGSG+ YA
Sbjct: 145 MVYQYKG--------MGLSMGTMICGWDK-RGPGLYYVDSEGNRISGTAFSVGSGSVYAY 195
Query: 240 AILDTDYRPDLSEEEAYALATSAI 263
++D Y DL EEAY LA AI
Sbjct: 196 GVMDRGYSYDLKVEEAYDLARRAI 219
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 56 MLHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIE 95
>gi|291403559|ref|XP_002717947.1| PREDICTED: proteasome beta 11 subunit [Oryctolagus cuniculus]
Length = 303
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S ++IPV +L T +G +ADCV W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SRKIIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMLSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTWLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y ++
Sbjct: 191 GYRYDMGIQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLYTQLQK 250
>gi|194038909|ref|XP_001925798.1| PREDICTED: proteasome subunit beta type-11-like [Sus scrofa]
Length = 291
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SRKVIPVHQHLLGTTSGTSADCTTWYRVLRRELRLRELREGQLPSVAGAAKLLSGMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G L++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTLLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y++ ++
Sbjct: 191 GYRYDMSTQEAYALACRAVAHATHRDAYSGGSVDLFHVRESGWEHVSRNDAWVLYSELQK 250
>gi|431907187|gb|ELK11253.1| Proteasome subunit beta type-11 [Pteropus alecto]
Length = 299
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S ++IPV +L T +G +ADC W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SCKIIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVAGAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G +EG F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWD-CSGPALFYVYSDGTRLEGNIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D++ +EAY LA A+ HA RD +SGG V L+ + GW+ V D +Y++ ++
Sbjct: 191 GYRYDMTTQEAYTLARCAVAHATHRDGYSGGSVDLFHVRESGWEYVSRNDAWVLYSELQK 250
>gi|148702198|gb|EDL34145.1| mCG7455 [Mus musculus]
Length = 144
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+C+ YE + + +++ A+ LL NMV +Y+ GLS T++ +D+ GP LY
Sbjct: 1 QCRIYELRNKERISVAAASKLLANMVYQYK--------GMGLSMDTMICGWDK-RGPGLY 51
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+D+ G I GT F VGSG YA ++D Y DL EEAY LA AIY A RD +SGG
Sbjct: 52 YVDSEGNRISGTAFAVGSGFVYAYGVMDRGYSYDLKVEEAYDLACQAIYQATYRDAYSGG 111
Query: 276 CVRLYKINGQGWQQVLSRDVKDIYN 300
V LY + GW +V S V D+++
Sbjct: 112 AVNLYHVQEDGWIRVSSDTVADLHD 136
>gi|47210559|emb|CAF96424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 224
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P+ S ++ T +G +ADCV W LA+E + Y+ ++ ++ R AA LL +M+ ++
Sbjct: 65 KIVPIHSHLVGTTSGTSADCVLWKRILARELRLYQLRHGRRLSTRGAAKLLSHMLHPFKG 124
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ L + +D GP L+ + + G + GT F VGSG+ YA +ILD
Sbjct: 125 TD--------LCVAATLCGWDGFSGPSLHYVCSDGTRLPGTLFSVGSGSPYAYSILDQGV 176
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+LS EEA ++A A++ A RD +SG V +Y I+ +GW + D
Sbjct: 177 EWNLSVEEATSVAREAVFRATHRDAYSGNNVDIYLISSKGWTRRRRED 224
>gi|426376399|ref|XP_004054988.1| PREDICTED: proteasome subunit beta type-11 [Gorilla gorilla
gorilla]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVQESGWEHVSRSDACVLYMELQK 250
>gi|332841886|ref|XP_522799.2| PREDICTED: proteasome subunit beta type-11 [Pan troglodytes]
gi|397473331|ref|XP_003808168.1| PREDICTED: proteasome subunit beta type-11 [Pan paniscus]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYMELQK 250
>gi|388454400|ref|NP_001253615.1| proteasome subunit beta type-11 [Macaca mulatta]
gi|355693140|gb|EHH27743.1| hypothetical protein EGK_18014 [Macaca mulatta]
gi|355778437|gb|EHH63473.1| hypothetical protein EGM_16446 [Macaca fascicularis]
gi|383415721|gb|AFH31074.1| proteasome subunit beta type-11 precursor [Macaca mulatta]
Length = 300
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPMLFYVYSDGTRLQGNIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYMELQK 250
>gi|52547780|gb|AAU81925.1| low molecular mass protein 7, partial [Marmota monax]
Length = 156
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 9/144 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++ +L T++G AADC YW LAKEC+ Y + +++ A+ LL NM+ +YR
Sbjct: 22 KVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG 81
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G+++ +D+ GP LY +D+ G + G F GSG YA ++D+ Y
Sbjct: 82 --------MGLSMGSMICGWDKK-GPGLYYVDHNGTRLSGCMFSTGSGNSYAYGVMDSGY 132
Query: 247 RPDLSEEEAYALATSAIYHACRRD 270
P+LS EEAY L AI HA RD
Sbjct: 133 LPNLSPEEAYDLGRRAIVHATHRD 156
>gi|153791216|ref|NP_001093250.1| proteasome subunit beta type-11 precursor [Homo sapiens]
gi|158513330|sp|A5LHX3.1|PSB11_HUMAN RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|148537365|dbj|BAF63540.1| proteasome subunit beta5t [Homo sapiens]
gi|307686397|dbj|BAJ21129.1| proteasome (prosome, macropain) subunit, beta type, 11 [synthetic
construct]
Length = 300
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYVELQK 250
>gi|193783753|dbj|BAG53735.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYVELQK 250
>gi|402875684|ref|XP_003901627.1| PREDICTED: proteasome subunit beta type-11 [Papio anubis]
Length = 300
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPMLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYMELQK 250
>gi|324512155|gb|ADY45042.1| Proteasome subunit beta type-5 [Ascaris suum]
Length = 282
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + ++ +T+ A+
Sbjct: 88 SAGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKSEITVAAAS 147
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGS 233
N++ YR GLS G+++A YD+ GP ++ +D+ G E + C VGS
Sbjct: 148 KYFSNVLYGYRN--------YGLSVGSMIAGYDK-RGPAIFKVDSEGQR-EQLRLCSVGS 197
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
G+ A +LDT Y+P +++EEA AL AI HA RD SGG + I +G ++
Sbjct: 198 GSLSAYGVLDTFYQPKMTDEEARALGRRAIMHATFRDSGSGGVCNMVHITPKGKIRLPKL 257
Query: 294 DVKDIY 299
DV ++
Sbjct: 258 DVSQLF 263
>gi|357606699|gb|EHJ65175.1| proteasome subunit beta 5 [Danaus plexippus]
Length = 228
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 18/150 (12%)
Query: 106 TGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYR 165
TGG+ G SQS +++ ++ +L TLAG AADCVYW LAK+C+ YE + R
Sbjct: 94 TGGQFIG--SQSMK-------KIVEINDYLLGTLAGGAADCVYWDRVLAKQCRLYELRNR 144
Query: 166 TGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIE 225
+++ A+ L+ NMV Y+ GLS G ++A D+ G QLY +D+ G
Sbjct: 145 ERISVAAASKLMANMVYNYK--------GMGLSMGMMLAGIDK-RGAQLYYVDSEGTRTP 195
Query: 226 GTKFCVGSGAEYAQAILDTDYRPDLSEEEA 255
G F VGSG+ YA +LD+ YR DL +EEA
Sbjct: 196 GKVFSVGSGSVYAFGVLDSGYRWDLEDEEA 225
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGFRY G++LA DSRAT I SQ + K +
Sbjct: 70 FDHGTTTLGFRYKGGVLLAVDSRATGGQFIGSQSMKKIVE 109
>gi|354488003|ref|XP_003506160.1| PREDICTED: proteasome subunit beta type-11-like [Cricetulus
griseus]
gi|344242610|gb|EGV98713.1| Proteasome subunit beta type-11 [Cricetulus griseus]
Length = 305
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADCV W L +E + E + ++ A LL M+ +Y
Sbjct: 80 SRKVIPVHQHLLGTTSGTSADCVTWYRVLQRELRLRELREGQLPSVAGTAKLLSAMLSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G + G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDHS-GPALFYVYSDGTCLRGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 SYRYDMTVQEAYALARCAVTHATHRDAYSGGSVDLFHVRETGWEYVSRSDAFVLYMELQK 250
Query: 305 AP 306
P
Sbjct: 251 TP 252
>gi|308470996|ref|XP_003097730.1| CRE-PBS-5 protein [Caenorhabditis remanei]
gi|308239848|gb|EFO83800.1| CRE-PBS-5 protein [Caenorhabditis remanei]
Length = 284
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W ++AK C YE + +T +T+ A+
Sbjct: 92 SSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRTVAKYCTLYELREKTSITVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N++ YR GLS G+++A YD+ GPQ++ +D+ G + VGSG
Sbjct: 152 KYFANVLYGYRG--------QGLSVGSMVAGYDK-KGPQIFKVDSEGDRCQLKVCSVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A ILD Y+P +++EEA L AI HA RD SGG L I ++ D
Sbjct: 203 SLNAYGILDNHYKPKMTDEEARNLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMD 262
Query: 295 VKDIYNDRKE 304
V ++ + E
Sbjct: 263 VSKLWYEFSE 272
>gi|312075453|ref|XP_003140423.1| proteasome A-type and B-type family protein [Loa loa]
gi|307764412|gb|EFO23646.1| proteasome A-type and B-type family protein [Loa loa]
Length = 277
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + +T +T+ A+
Sbjct: 83 SAGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTEITVAAAS 142
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N++ YR NH GLS G+++A YD+ GP ++ +D+ G ++ +GSG
Sbjct: 143 KYFQNVLYSYR--NH------GLSVGSMIAGYDK-RGPAIFKVDSEGQRVQLRLCSIGSG 193
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A ILD Y+P ++++EAY L I HA RD SGG + I+ + D
Sbjct: 194 SLSAYGILDNFYQPKMTDDEAYKLGRRGIMHATYRDTGSGGVCNMVHISPTEKIRFPPLD 253
Query: 295 VKDIY 299
V +Y
Sbjct: 254 VSQLY 258
>gi|410962086|ref|XP_003987606.1| PREDICTED: proteasome subunit beta type-11 [Felis catus]
Length = 284
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
TS ++IPV +L T +G +ADC W L +E + + ++ AA LL M+
Sbjct: 79 TSRKIIPVHQHLLGTTSGTSADCAVWYRVLRRELRLRALREGQLPSVAGAAKLLSTMMSC 138
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 139 YRGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLQGNIFSVGSGSPYAYGVLD 189
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y++ +
Sbjct: 190 RGYRYDMTPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLYSELQ 249
Query: 304 EAP 306
+ P
Sbjct: 250 KLP 252
>gi|301781286|ref|XP_002926066.1| PREDICTED: proteasome subunit beta type-11-like [Ailuropoda
melanoleuca]
Length = 291
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S ++IPV +L T +G +ADC W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SRKIIPVHQHLLGTTSGTSADCATWYRVLRRELRLRALREGQPPSVAGAARLLSAMLSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G + G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLPGNVFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y+ ++
Sbjct: 191 GYRYDMSPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLYSQLQK 250
Query: 305 AP 306
P
Sbjct: 251 LP 252
>gi|410920984|ref|XP_003973963.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
Length = 375
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P+ S ++ T +G +ADCV W LA+E + Y+ ++ ++ R AA L +M+ ++
Sbjct: 139 KIVPIHSHLVGTTSGTSADCVLWKRILARELRLYQLRHGRRLSTRGAAKLFSHMLHPFKG 198
Query: 187 ----------------GNHSSKIPNGLSFGTL-----------------------MAAYD 207
G+ S K + G++
Sbjct: 199 TELCVAATLCGWDGTGGDTSGKANASMHSGSMKPQVSHFRTPVDGGPGTSAPKASAGVRS 258
Query: 208 EILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHAC 267
GP LY + + G ++GT F VGSG+ YA +ILD DLS EEA ++A A++ A
Sbjct: 259 SFSGPSLYYVCSDGTRLQGTVFSVGSGSPYAYSILDQGVEWDLSVEEATSVAREAVFRAT 318
Query: 268 RRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
RD +SG CV +Y I+ +GW + D+K+ Y
Sbjct: 319 HRDAYSGNCVDVYLISSKGWTRRRREDLKEEY 350
>gi|281343379|gb|EFB18963.1| hypothetical protein PANDA_015662 [Ailuropoda melanoleuca]
Length = 256
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
S ++IPV +L T +G +ADC W L +E + + ++ AA LL M+ +
Sbjct: 79 ASRKIIPVHQHLLGTTSGTSADCATWYRVLRRELRLRALREGQPPSVAGAARLLSAMLSR 138
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR + L T + +D GP L+ + + G + G F VGSG+ YA +LD
Sbjct: 139 YRGLD--------LCVATALCGWDRS-GPALFYVYSDGTRLPGNVFSVGSGSPYAYGVLD 189
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y+ +
Sbjct: 190 RGYRYDMSPQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRNDACVLYSQLQ 249
Query: 304 EAP 306
+ P
Sbjct: 250 KLP 252
>gi|348577161|ref|XP_003474353.1| PREDICTED: proteasome subunit beta type-11-like [Cavia porcellus]
Length = 297
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADCV W L +E + + ++ AA LL M+ +Y
Sbjct: 80 SLKVIPVHQHLLGTTSGTSADCVTWYRVLRRELRLRALREGQMPSVAGAAKLLSTMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G +G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWD-CSGPALFYVYSDGTCFQGDIFSVGSGSPYAYGVLDH 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D++ +EAY LA A+ HA RD +SGG V L+ + GW+ V D +Y + +
Sbjct: 191 GYRYDMTTQEAYTLARRAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACVLYTELQM 250
Query: 305 AP 306
P
Sbjct: 251 LP 252
>gi|162606150|ref|XP_001713590.1| 26S proteasome SU B5 [Guillardia theta]
gi|13794510|gb|AAK39885.1|AF165818_93 26S proteasome SU B5 [Guillardia theta]
Length = 205
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V + +++ +S+++L T+AG AADC +W +L+ CK +E + +++ ++
Sbjct: 32 SMGSYVGSSKVRKILEISNNLLGTMAGGAADCFFWERNLSSLCKIFEIRNNQKLSVAGSS 91
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+L++M+ Y+ GLS GT++ +D+ GP +Y +D+ G I+ VGSG
Sbjct: 92 KVLMSMISNYKNA--------GLSMGTMILGWDK-NGPNIYYVDSEGSRIKIKIISVGSG 142
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+A +ILD+ Y EA L +AI A D +SGG LY + GW ++ S+
Sbjct: 143 CLFAYSILDSGYNWFTRINEAIDLGRNAIVQAALNDPYSGGYNNLYLVRSNGWIKIFSKR 202
Query: 295 V 295
+
Sbjct: 203 I 203
>gi|341876502|gb|EGT32437.1| CBN-PBS-5 protein [Caenorhabditis brenneri]
Length = 284
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + +T +T+ A+
Sbjct: 92 SSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N++ YR GLS G+++A YD+ GPQ++ +D+ G + VGSG
Sbjct: 152 KYFANVLYGYRG--------QGLSVGSMVAGYDK-KGPQIFKVDSEGDRCQLKVCSVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A ILD Y+P +++EEA L AI HA RD SGG L I ++ D
Sbjct: 203 SLNAYGILDNHYKPKMTDEEARQLGLRAIMHATYRDSGSGGVCNLCHITPTEKIRLPPMD 262
Query: 295 VKDIYNDRKE 304
V ++ + E
Sbjct: 263 VSKLWFEFAE 272
>gi|348540002|ref|XP_003457477.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 224
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ P+ S ++ T +G+ ADC+ W L +E + Y+ ++ ++IR A LL +M+ ++
Sbjct: 45 KITPIHSHLVVTSSGSGADCMLWERILIREIRLYQLRHGHRLSIRATAKLLSSMLHPFKG 104
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ + +D+ GP+L + + G ++G F VGSG+ YA +LD +
Sbjct: 105 TE--------MCVALTLCGWDK-RGPKLIYVCSDGARLQGDVFSVGSGSPYAYGVLDREL 155
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
R LS+ EA +LA A++ A RD +SG V L+ I QGW Q D+K+ Y
Sbjct: 156 RWSLSKGEAISLAREAVFRATHRDAYSGNNVDLFHITAQGWSQRKREDLKEEY 208
>gi|2654060|gb|AAB87680.1| proteasome subunit X [Danio rerio]
Length = 218
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC +W LA++C+ YE + + +++ A+ LL N
Sbjct: 77 IASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLAN 136
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA
Sbjct: 137 MVYQYK--------GMGLSMGTMVCGWDK-RGPGLYYVDSEGNRVCGDLFAVGSGSMYAY 187
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRD 270
++D+ R DL+ +EA L IY A RD
Sbjct: 188 GVVDSGLRYDLTIDEACDLGRRGIYQATYRD 218
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTL F++ G+I+A DSRATA I SQ + K +
Sbjct: 48 FLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIE 87
>gi|441667133|ref|XP_004091951.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-11
[Nomascus leucogenys]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W +E + E + ++ A LL M +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGXSADCATWYRVXQRELRLRELREGQLPSVASAXKLLSAMKSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP+L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWD-CSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S +EAYALA A+ HA RD +SGG V L+ + GW+QV D +Y + ++
Sbjct: 191 GYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEQVSRSDACVLYMELQK 250
>gi|134078851|emb|CAK45910.1| unnamed protein product [Aspergillus niger]
Length = 379
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 124 TSFQVIPVSS--------------SILCTLAGNAADCVYWLHS--LAKECKGYECKYRTG 167
T +VIPVS +L T+AG AA C + L G + +++
Sbjct: 180 TVKKVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAAVCAILVEQFMLCARIMG-QIRHKRR 238
Query: 168 MTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGT 227
+T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G + G
Sbjct: 239 ITVAAASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGN 290
Query: 228 KFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
FCVGSG +A +LD +YR DL+EEEA L +I A RD +SGG + LY + +GW
Sbjct: 291 LFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEEGW 350
Query: 288 QQVLSRDVKDIYNDRK 303
D+ I+ K
Sbjct: 351 VHHGFNDMNPIFWKTK 366
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 150 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 188
>gi|359320114|ref|XP_003639262.1| PREDICTED: proteasome subunit beta type-11-like [Canis lupus
familiaris]
Length = 282
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 124 TSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRK 183
S ++IPV +L T +G +ADC W L +E + + ++ AA LL M+
Sbjct: 79 ASRKIIPVHQHLLGTTSGTSADCAAWYRVLRRELRLRALREGRLPSVAGAARLLSAMMSC 138
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
YR + L T + +D GP L+ + + G + G F VGSG+ YA +LD
Sbjct: 139 YRGLD--------LCVATALCGWDRS-GPALFYVCSDGTRLPGNVFSVGSGSPYAYGVLD 189
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YR DLS +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y++ +
Sbjct: 190 RGYRYDLSPQEAYALARRAVAHATHRDAYSGGSVDLFHVREDGWEYVSRDDACVLYSELQ 249
Query: 304 EAP 306
+ P
Sbjct: 250 KLP 252
>gi|403264180|ref|XP_003924369.1| PREDICTED: proteasome subunit beta type-11 [Saimiri boliviensis
boliviensis]
Length = 304
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPTLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
Y D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYHYDMTTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRNDACVLYVELQK 250
>gi|268570046|ref|XP_002640679.1| C. briggsae CBR-PBS-5 protein [Caenorhabditis briggsae]
Length = 284
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + + +T+ A+
Sbjct: 92 SSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKNSITVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N++ YR GLS G+++A YD+ GPQ++ +D+ G + VGSG
Sbjct: 152 KYFANVLYGYRG--------QGLSVGSMVAGYDK-KGPQIFKVDSEGDRCQLKVCSVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
+ A ILD Y+P +++EEA L AI HA RD SGG L
Sbjct: 203 SLNAYGILDNHYKPKMTDEEARKLGLRAIMHATYRDSGSGGVCNL 247
>gi|413953154|gb|AFW85803.1| hypothetical protein ZEAMMB73_646691 [Zea mays]
Length = 263
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 26/185 (14%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 82 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGTKCRLHELSNKRRISIAGAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G
Sbjct: 142 KLLANILYSYRG--------MGLSIGTMIAGWDE-KGPGLYYVDSEGARLVGNS------ 186
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
YR +S EEA LA AIY A RD SGGCV +Y + GW ++ D
Sbjct: 187 -----------YRFSMSVEEAAELARRAIYGATFRDAASGGCVSVYHVGPDGWTKLSGDD 235
Query: 295 VKDIY 299
V +++
Sbjct: 236 VGELH 240
>gi|296214538|ref|XP_002753675.1| PREDICTED: proteasome subunit beta type-11 [Callithrix jacchus]
Length = 300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ AA LL M+ +Y
Sbjct: 80 SCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDRS-GPTLFYVYSDGTRLQGDIFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
Y D++ +EAYALA A+ HA RD +SGG V L+ + GW+ V D +Y + ++
Sbjct: 191 GYHYDMTNQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVLYVELQK 250
>gi|425779151|gb|EKV17240.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
Length = 275
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 109 ERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGM 168
++ P S+ S S Q P +L T+AG AA H E +++ +
Sbjct: 84 KKVIPVSRLSRGEDKKSNQPTP---GLLGTMAGGAARGKDTAHEFY-----LEIRHKRRI 135
Query: 169 TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK 228
T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G + G
Sbjct: 136 TVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGNL 187
Query: 229 FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
FCVGSG +A +LD +Y+ +L+EEEA L AI A RD +SGG + LY + +GW
Sbjct: 188 FCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEEGWV 247
Query: 289 QVLSRDVKDIYNDRK 303
D+ I+ D K
Sbjct: 248 HHGFDDMNPIFWDTK 262
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ TDSRATA + I SQ + K S
Sbjct: 52 GTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVS 90
>gi|425766229|gb|EKV04853.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
Length = 291
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 109 ERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGM 168
++ P S+ S S Q P +L T+AG AA H E +++ +
Sbjct: 100 KKVIPVSRLSRGEDKKSNQPTP---GLLGTMAGGAARGKDTAHEFY-----LEIRHKRRI 151
Query: 169 TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK 228
T+ A+ +L N+ Y+ GLS GT++A GP LY +D+ G + G
Sbjct: 152 TVAAASKILANLTYAYKG--------YGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGNL 203
Query: 229 FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
FCVGSG +A +LD +Y+ +L+EEEA L AI A RD +SGG + LY + +GW
Sbjct: 204 FCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAMHRDAYSGGFINLYHVKEEGWV 263
Query: 289 QVLSRDVKDIYNDRK 303
D+ I+ D K
Sbjct: 264 HHGFDDMNPIFWDTK 278
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ TDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVS 106
>gi|17508499|ref|NP_493558.1| Protein PBS-5 [Caenorhabditis elegans]
gi|3924797|emb|CAB04567.1| Protein PBS-5 [Caenorhabditis elegans]
Length = 284
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + +++ + ++ T+AG AADC +W +AK C YE + +T +T+ A+
Sbjct: 92 SSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAAS 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N + YR GLS G+++A YD+ GPQ++ +D+ G + VGSG
Sbjct: 152 KYFANTLYGYRG--------QGLSVGSMVAGYDK-KGPQIFKVDSEGDRCQLKVCSVGSG 202
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
+ A ILD Y+P ++++EA L AI HA RD SGG L
Sbjct: 203 SLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSGGVCNL 247
>gi|392588627|gb|EIW77959.1| proteasome component pts1 [Coniophora puteana RWD-64-598 SS2]
Length = 306
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + T ++I ++ +L T+AG DC YW L C+ +E + +++ A+
Sbjct: 109 TMGSYIGSGTVKKIIEINPYLLGTMAGGGGDCSYWETYLGMHCRLHELRNHERISVAAAS 168
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L N++ Y+ S P L F + GP +Y +D G ++G F VGSG
Sbjct: 169 KYLSNLLYSYKGTGLSVNTP--LIFASQ--------GPAVYYVDADGTRMKGDLFSVGSG 218
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +LD YR DLS+ EAY LA +I+ A RD SG +Y + GW + + D
Sbjct: 219 STFAYGVLDQGYRSDLSDAEAYELARRSIHAAGHRDAFSGNQCNVYHVKQDGWTFIGNYD 278
Query: 295 VKDIY 299
+ +++
Sbjct: 279 LSELH 283
>gi|197129147|gb|ACH45645.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 270
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ +L T+AG AADC +W +A++C+ E + + +++ A+ LL N+V +Y+
Sbjct: 109 KVLPIGGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKG 168
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS GT++ +D+ GP LY +D+ G + G F VGSG+ YA +LD
Sbjct: 169 --------LGLSLGTMLCGWDK-RGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGL 219
Query: 247 -RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
SEE A LA AI A RD +SGG R G GW
Sbjct: 220 AAAARSEEAACELARRAIAQAAHRDAYSGG-XRTGDARGAGW 260
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
+ GTTTL F+ P G+ +A DSRATA I SQ + K
Sbjct: 73 ILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRK 109
>gi|406701686|gb|EKD04801.1| proteasome component [Trichosporon asahii var. asahii CBS 8904]
Length = 275
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 22/182 (12%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 89 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKIL 148
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS +GP L+ +D+ G ++G F VGSG+ Y
Sbjct: 149 SNIVYQYKG--------MGLS-----------MGPALFYVDSDGQRLKGDLFSVGSGSTY 189
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD + DLS+E+A L +I A RD +SG + LY + GW+ + + D+ +
Sbjct: 190 AYGVLD---QWDLSDEDAQELGRRSICAAGHRDAYSGNTINLYHVRENGWEFIDNYDLSE 246
Query: 298 IY 299
++
Sbjct: 247 LW 248
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 65 GTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKKVIE 101
>gi|348504568|ref|XP_003439833.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
niloticus]
Length = 268
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +++P+ S ++ +G +ADC W LA+E + Y+ ++ ++ AA LL +M+ +
Sbjct: 76 SQKILPIHSHLVGLTSGTSADCALWKRILARELRLYQLRHGRRLSTSGAAKLLSHMLHPF 135
Query: 185 RTGNHSSKIPNGLSFGTLMAAYD-----EILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ L + +D + GP L+ + + G + G F VGSG+ YA
Sbjct: 136 KGTE--------LCVAATLCGWDGGEKMNLSGPSLFYVCSDGTRLRGMLFSVGSGSPYAY 187
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ILD L+ +EA ++A A+Y A RD +SG CV +Y I +GW + D+K+ Y
Sbjct: 188 SILDQGVHWGLTVDEAKSIAREAVYRATYRDAYSGNCVDMYHITSKGWTRRNREDLKEEY 247
Query: 300 NDRKE 304
K+
Sbjct: 248 YREKQ 252
>gi|401881406|gb|EJT45706.1| proteasome component [Trichosporon asahii var. asahii CBS 2479]
Length = 275
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 22/182 (12%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + T +VI ++ +L T+AG AADC YW L +C+ +E + + +++ A+ +L
Sbjct: 89 SYIASGTVKKVIEINPYLLGTMAGGAADCQYWETYLGMQCRLHELRNKERISVAAASKIL 148
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+V +Y+ GLS +GP L+ +D+ G ++G F VGSG+ Y
Sbjct: 149 SNIVYQYKG--------MGLS-----------MGPALFYVDSDGQRLKGDLFSVGSGSTY 189
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD + +LS+E+A L +I A RD +SG + LY + GW+ + + D+ +
Sbjct: 190 AYGVLD---QWNLSDEDAQELGRRSICAAGHRDAYSGNTINLYHVRENGWEFIDNYDLSE 246
Query: 298 IY 299
++
Sbjct: 247 LW 248
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 65 GTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKKVIE 101
>gi|157822847|ref|NP_001099502.1| proteasome subunit beta type-11 [Rattus norvegicus]
gi|149063912|gb|EDM14182.1| rCG23402 [Rattus norvegicus]
Length = 301
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADC W L +E + E + ++ A LL M+ +Y
Sbjct: 80 SRKVIPVHRHLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLSAMMSRY 139
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 140 RGLD--------LCVATALCGWDHS-GPALFYVYSDGTCLQGDVFSVGSGSPYAYGVLDR 190
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
Y D++ +EAY LA A+ HA RD +SGG V L+ + GW+ + D +Y + +E
Sbjct: 191 SYHYDMTVQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYISRSDACVLYRELQE 250
Query: 305 A 305
A
Sbjct: 251 A 251
>gi|443926279|gb|ELU44982.1| proteasome component pts1 [Rhizoctonia solani AG-1 IA]
Length = 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNA-------------------ADCVYWLHSLAK 155
+ S + T +VI ++ +L T+AG A ADC YW L
Sbjct: 100 TAGSYIASGTVKKVIEINKYLLGTMAGGAGKSRVQCEVVLRALSGYLLADCQYWETYLGI 159
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+C+ +E + R +++ AA+ ++ + S++ L GT++A +D+ GP L+
Sbjct: 160 QCRLHELRNRERISV--AADDILCL--------PDSRLTCRLPQGTMIAGWDKT-GPALF 208
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+D+ G ++G F VGSG+ +A +LD Y DLS+EEA L +IY A RD SG
Sbjct: 209 YVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYHWDLSDEEAQELGRRSIYAAGHRDAFSGN 268
Query: 276 CVRLYKINGQGWQQVLSRDVKDIYNDRKEAPPG 308
+ LY + GW + + DV ++ D PG
Sbjct: 269 TINLYHVKEHGWDFIGNYDVTKLHYDGPGQIPG 301
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+A DSRATA I S + K +
Sbjct: 79 GTTTLAFRFKGGIIVAVDSRATAGSYIASGTVKKVIE 115
>gi|322692812|gb|EFY84700.1| proteasome component PRE2 precursor [Metarhizium acridum CQMa 102]
Length = 288
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ H T+ I+ A + K+C+ +E +++ +++ A+ +L N
Sbjct: 99 IAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKCRLHELRHKRRISVAAASKILAN 158
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 159 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 210
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
+LD +Y DLS E+A L +I A RD +SGG + LY + +GW
Sbjct: 211 GVLDAEYNYDLSVEDALELGRRSILAATHRDAYSGGFINLYHVKEEGW 258
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNK 38
GTTTL FR+ GII+ATDSRATA + I SQ + K
Sbjct: 102 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKK 135
>gi|358367427|dbj|GAA84046.1| proteasome component PRE2 precursor [Aspergillus kawachii IFO 4308]
Length = 281
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 37/187 (19%)
Query: 127 QVIPVS--------------SSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRH 172
+VIPVS +L T+AG AA E +++ +T+
Sbjct: 101 KVIPVSRLSRGEDKPSNEPTPGLLGTMAGGAAT---------------EIRHKRRITVAA 145
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVG 232
A+ +L N+ Y+ GLS GT++A GP LY +D+ G + G FCVG
Sbjct: 146 ASKILANLTYAYKG--------MGLSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVG 197
Query: 233 SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
SG +A +LD +Y DL+EEEA L +I A RD +SGG + LY + +GW
Sbjct: 198 SGQTFAYGVLDANYHYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEEGWVHHGF 257
Query: 293 RDVKDIY 299
D+ I+
Sbjct: 258 NDMNPIF 264
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
GTTTL FR+ GII+ATDSRATA + I SQ + K S
Sbjct: 68 GTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVS 106
>gi|301629961|ref|XP_002944100.1| PREDICTED: proteasome subunit beta type-8-like, partial [Xenopus
(Silurana) tropicalis]
Length = 141
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 160 YECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDN 219
Y+ + + +++ A+ LL NM+ +YR +GLS G+++ +D+ +GP LY +D+
Sbjct: 2 YQLRNNSRISVSAASKLLCNMMLQYR--------GSGLSMGSMICGWDK-MGPGLYYVDD 52
Query: 220 TGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
G + G F GSG YA ++D+ YR DL+ EAY L A+ +A RD +SGG V +
Sbjct: 53 NGTRLSGDIFSTGSGNSYAYGVMDSGYRYDLTPVEAYDLGRRAVSYAAHRDNYSGGVVNM 112
Query: 280 YKINGQGWQQVLSRDVKDI 298
Y + GW +V DV D+
Sbjct: 113 YHMKEDGWVKVGEFDVGDL 131
>gi|109734432|gb|AAI17734.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|109734838|gb|AAI17733.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|148704390|gb|EDL36337.1| mCG51940 [Mus musculus]
Length = 302
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V S +VIPV +L T +G +ADC W L +E + E + ++ A LL
Sbjct: 73 SYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLL 132
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
M+ YR + L T + +D GP L+ + + G ++G F VGSG+ Y
Sbjct: 133 AAMMSCYRGLD--------LCVATALCGWDHS-GPALFYVYSDGTCLQGDIFSVGSGSPY 183
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y D++ +EAY LA A+ HA RD +SGG V L+ + GW+ V D
Sbjct: 184 AYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACV 243
Query: 298 IYNDRKEA 305
+Y + ++A
Sbjct: 244 LYRELQKA 251
>gi|30424826|ref|NP_780413.1| proteasome subunit beta type-11 precursor [Mus musculus]
gi|81895979|sp|Q8BG41.1|PSB11_MOUSE RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|26332132|dbj|BAC29796.1| unnamed protein product [Mus musculus]
gi|26334457|dbj|BAC30929.1| unnamed protein product [Mus musculus]
gi|74183992|dbj|BAE37039.1| unnamed protein product [Mus musculus]
gi|148537363|dbj|BAF63539.1| proteasome subunit beta5t [Mus musculus]
Length = 302
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V S +VIPV +L T +G +ADC W L +E + E + ++ A LL
Sbjct: 73 SYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLL 132
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
M+ YR + L T + +D GP L+ + + G ++G F VGSG+ Y
Sbjct: 133 AAMMSCYRGLD--------LCVATALCGWDHS-GPALFYVYSDGTCLQGDIFSVGSGSPY 183
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +LD Y D++ +EAY LA A+ HA RD +SGG V L+ + GW+ V D
Sbjct: 184 AYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDACV 243
Query: 298 IYNDRKEA 305
+Y + ++A
Sbjct: 244 LYRELQKA 251
>gi|327289327|ref|XP_003229376.1| PREDICTED: proteasome subunit beta type-11-like [Anolis
carolinensis]
Length = 372
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S + +S +VI + +L T +G +ADC WL L + ++ AA LL
Sbjct: 107 SLISDPSSRKVITLHRHLLATTSGTSADCATWLRLLRCSLRLRHLNEGQQPSVAGAAKLL 166
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
++R G HS L TL+ +D GP LY + + G + G F VGSG+ Y
Sbjct: 167 AFLLR----GCHSKD----LCVATLLCGWDHN-GPGLYYVYSDGTCLSGDVFSVGSGSPY 217
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A ++D Y DL +EA+ LA A+ HA RD +SGG V LY + GW + D+ D
Sbjct: 218 AYGVMDGGYSYDLPHDEAFLLARQAVGHAAHRDSYSGGNVDLYHVRSSGWVCISREDLTD 277
Query: 298 IY 299
+Y
Sbjct: 278 VY 279
>gi|432856492|ref|XP_004068444.1| PREDICTED: proteasome subunit beta type-11-like [Oryzias latipes]
Length = 357
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 37/239 (15%)
Query: 104 VYTGGERCGPFSQSS---TVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
V+ GG ++SS V S +++P+ S ++ T +G +ADC W L++E + Y
Sbjct: 107 VFQGGVLAAADTRSSCSGLVACPASQKILPIHSHLVGTTSGTSADCALWKRILSRELRLY 166
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYR------------TGNHS--SKIPNGLSFGTLMAAY 206
+ + ++ AA LL +M+ ++ +HS + G +
Sbjct: 167 QLRNGRRLSTSGAAKLLSHMLHPFKGTELCVAATLCGWDDHSGSRRAAQGQKTDLEAVSS 226
Query: 207 DEIL--------------------GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
D++ GP L+ + + G ++GT F VGSG+ YA +ILD
Sbjct: 227 DKVSLSKSSFLTQQPCARKEASLSGPSLFYVCSDGSRLQGTLFSVGSGSPYAYSILDQGV 286
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
+ L+ EA ++A A+Y A RD +SG CV +Y + QGW + D+K+ Y KE+
Sbjct: 287 QWGLTVAEATSIAREAVYRATYRDAYSGNCVDIYHVTSQGWTRRTREDLKEEYYREKES 345
>gi|429858330|gb|ELA33155.1| proteasome component pre2 [Colletotrichum gloeosporioides Nara gc5]
Length = 267
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++S +L T+AG G R +++ A+ +L N
Sbjct: 97 IASQTVKKVIEINSVLLGTMAG-----------------GRRLPRR--ISVAAASKILAN 137
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+V Y+ GLS GT+ A + GP LY +D+ G + G FCVGSG +A
Sbjct: 138 LVYSYKG--------MGLSMGTMCAGVTKEEGPALYYVDSDGTRLAGNLFCVGSGQTFAY 189
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+LD +YR DL+++EA L + +I A RD +SGG + LY + +GW + D I+
Sbjct: 190 GVLDAEYRYDLTDQEALELGSRSILAATHRDAYSGGFINLYHVKEEGWVKHGFNDTNPIF 249
Query: 300 NDRK 303
K
Sbjct: 250 WKTK 253
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRA A + I SQ + K +
Sbjct: 71 GTTTLAFRFQGGIIVATDSRAPAGNWIASQTVKKVIE 107
>gi|56567040|gb|AAV98549.1| proteasome subunit beta type 5 [Macaca mulatta]
Length = 108
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 196 GLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEA 255
GLS GT++ +D+ GP LY +D+ G I G F VGSG+ YA ++D Y DL E+A
Sbjct: 4 GLSMGTMICGWDK-RGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 62
Query: 256 YALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
Y LA AIY A RD +SGG V LY + GW +V S +V D++
Sbjct: 63 YDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLH 106
>gi|349805275|gb|AEQ18110.1| putative psmb8 protein [Hymenochirus curtipes]
Length = 119
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 168 MTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGT 227
+++ A+ L+ NM+ +YR GLS G+++ +D+ GP LY +D+ G + G
Sbjct: 1 ISVSAASKLMCNMMLQYR--------GTGLSVGSMICGWDK-KGPGLYYVDDNGTRLSGD 51
Query: 228 KFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
F GSG YA ++D+ YR +L+ EEAY L AI +A RD +SGG V LY + GW
Sbjct: 52 VFSTGSGNSYAYGVMDSGYRYELTPEEAYDLGRRAISYATHRDAYSGGVVNLYHMKEDGW 111
Query: 288 QQVLSRDV 295
++ DV
Sbjct: 112 MKIGQLDV 119
>gi|323456588|gb|EGB12455.1| hypothetical protein AURANDRAFT_20025 [Aureococcus anophagefferens]
Length = 197
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG C S++S V ++ + IPVS + L T+AG+A DC YWL L+ K E
Sbjct: 12 FDGGTMCCVDSRASLGNFVGSYSTEKAIPVSRTTLGTMAGSAGDCTYWLRLLSATSKLAE 71
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPN-GLSFGTLMAAYDEILGPQLYMLDNT 220
+ + R A L ++ S + N LS GT+M +D+ L DN+
Sbjct: 72 LETGFPPSARRNAEYLAGLL--------SRQDKNLDLSVGTMM--FDD---ATLTYADNS 118
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G + G F VGSG+ YA ++LD YR DL+ +EA LA A+ A RD +SGG V +Y
Sbjct: 119 GACLAGHLFAVGSGSPYAYSVLDAGYRADLNVDEAADLAEKAVRTAAARDAYSGGIVNVY 178
Query: 281 ---KINGQGWQQVLSRD 294
K G+ W+++ D
Sbjct: 179 FADKATGK-WRRLRRLD 194
>gi|326678924|ref|XP_002667581.2| PREDICTED: protein sel-1 homolog 3-like, partial [Danio rerio]
Length = 623
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V+P+ S ++ T +G +ADC W LA+E + Y+ ++R ++ AA LL +M+ ++
Sbjct: 54 KVLPIHSHLVGTTSGTSADCALWKRILARELRLYQLRHRRRLSTGGAAKLLSHMLHPFKG 113
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
L + +D GP++ + + GL ++G F VGSG+ YA +ILD
Sbjct: 114 TE--------LCVAATLCGWDGG-GPRVVYVCSDGLRLQGALFSVGSGSPYAYSILDGGV 164
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
R +S +EA A+A A+Y A RD +SG V LY + +GW++ ++K+ Y KE
Sbjct: 165 RWGMSAQEAAAVAREAVYRATYRDAYSGNNVDLYHVTAKGWRRRERENLKEEYYREKE 222
>gi|432915289|ref|XP_004079162.1| PREDICTED: proteasome subunit beta type-11-like [Oryzias latipes]
Length = 294
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYR- 185
++ P+ S ++ T +G+ ADC+ W L +E + Y+ +++ ++IR A LL M+ ++
Sbjct: 74 KITPIHSHLVVTSSGSGADCMLWERILTREIRLYQLRHKRRLSIRGTAKLLSLMLHPFKG 133
Query: 186 ---------------------------TGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLD 218
T + S + + T + + GP+L +
Sbjct: 134 TDVCVALTLCGWDKAESTKNLEETLGVTDDCSPSVCKDVPSKTNLLCFS---GPKLIYVC 190
Query: 219 NTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVR 278
+ G ++G F VGSG+ YA +LD L++EEA LA A++ A RD +SG V
Sbjct: 191 SDGARLQGDIFSVGSGSPYAYGVLDRSLSWSLNKEEAILLAREAVFRATHRDAYSGNNVD 250
Query: 279 LYKINGQGWQQVLSRDVKDIY 299
L+ + +GW+Q D+K+ Y
Sbjct: 251 LFHVTAEGWRQRQREDLKEEY 271
>gi|390986499|gb|AFM35769.1| hypothetical protein, partial [Oryza eichingeri]
Length = 117
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 9/124 (7%)
Query: 154 AKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ 213
A +C+ +E + ++I A+ LL N++ YR GLS GT++A +DE GP
Sbjct: 2 AFQCRLHELANKRRISIAGASKLLANILYSYR--------GMGLSIGTMIAGWDE-KGPG 52
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
LY +D+ G + G++F VGSG+ YA ILD YR +S EEA LA AIY A RD S
Sbjct: 53 LYYVDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMSVEEAAELARRAIYQATFRDGAS 112
Query: 274 GGCV 277
GGCV
Sbjct: 113 GGCV 116
>gi|426232752|ref|XP_004023679.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-11-like [Ovis aries]
Length = 279
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +VIPV +L T +G +ADCV W +E + + ++ AA LL M+ +Y
Sbjct: 80 SRKVIPVHQHLLGTTSGTSADCVTWYXQ--RELRLRALREGQLPSVAGAAKLLSVMMSRY 137
Query: 185 RTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
R + L T + +D GP L+ + + G ++G F VGSG+ YA +LD
Sbjct: 138 RGLD--------LCVATALCGWDRS-GPALFYVYSDGTFLQGDIFSVGSGSPYAYGVLDR 188
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
YR D+S T A+ HA RD +SGG V L+ + GW+ V D +Y++ ++
Sbjct: 189 GYRYDMS--------TRAVAHATHRDAYSGGSVDLFHVRESGWEYVSCHDAWVLYSELQK 240
>gi|335282239|ref|XP_003354003.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-5-like
[Sus scrofa]
Length = 279
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T VI +S +L T A A +C + LA++ YE + + +++ A+ LL N
Sbjct: 94 IASQTVKNVIEISLYLLATGAVGAVNCRF----LAQQXXIYELQNKGCISVAAASKLLAN 149
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
MV +Y+ GLS GT++ + + GP LY +D+ G I G F VGS + +A
Sbjct: 150 MVYQYKG--------MGLSMGTMICVWGK-RGPGLYYMDSEGNWIWGVDFSVGSRSVHAY 200
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+ Y DL E AY +A+ A Y A D +SGG V LY + GW Q S +V ++
Sbjct: 201 GFMGYSY--DLEVERAYDMASQATYXASXSDAYSGGLVNLYHVWEDGWIQSSSDNVAYLH 258
Query: 300 NDRKEAPP 307
E P
Sbjct: 259 YKYSEFSP 266
>gi|239788842|dbj|BAH71082.1| ACYPI000065 [Acyrthosiphon pisum]
Length = 216
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 9/121 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ ++ +L TLAG AADCVYW L+K+C+ +E + + +++ A+ ++ NM+ Y+
Sbjct: 105 KIVEINDFMLGTLAGGAADCVYWDRVLSKQCRLHELRNKERISVTAASKIMSNMIYYYK- 163
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
GLS G ++A YD+ GP L+ +DN G G F VGSG+ YA +LD+ Y
Sbjct: 164 -------GYGLSIGMMLAGYDKN-GPSLFYIDNDGSRTPGKVFSVGSGSIYAFGVLDSGY 215
Query: 247 R 247
+
Sbjct: 216 K 216
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTLGF Y GI+LA DSRAT I SQ + K +
Sbjct: 69 FHHGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVE 108
>gi|147742762|gb|ABQ50544.1| hypothetical protein [Brassica rapa]
Length = 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 209 ILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACR 268
I GP LY +DN G ++G +F VGSG+ YA +LD+ Y+ D+S EEA LA +IYHA
Sbjct: 107 IKGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATF 166
Query: 269 RDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
RD SGG +Y + GW ++ DV +++ PP
Sbjct: 167 RDGASGGVASVYHVGPNGWTKLSGDDVGELHYHYYPVPP 205
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 46 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 82
>gi|255547772|ref|XP_002514943.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
gi|223545994|gb|EEF47497.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
Length = 249
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 9/118 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++I ++ +L T+AG AADC +W +L +C+ +E + +++ A+ LL N++ YR
Sbjct: 90 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRG 149
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
GLS GT++A +DE GP LY +D+ G ++GT+F VGSG+ YA +LD+
Sbjct: 150 --------MGLSVGTMVAGWDET-GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDS 198
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F + EG+++A DSRA+ I SQ + K +
Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIE 93
>gi|405965865|gb|EKC31214.1| Proteasome subunit beta type-8 [Crassostrea gigas]
Length = 777
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
GT++ +D+ GP LY +D+ G + + VGSG+ YA +LD+ YR DLS EEA L
Sbjct: 669 GTMICGWDK-RGPGLYYVDSDGERMSNNIYSVGSGSVYAYGVLDSGYRYDLSVEEAIDLG 727
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIY 299
+IYHA RD +SGG V LY + GW+ + DV D++
Sbjct: 728 RRSIYHATHRDAYSGGVVNLYHMKESGWEFISQTDVFDLH 767
>gi|123480905|ref|XP_001323441.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121906306|gb|EAY11218.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 216
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGM------ 168
S S +P+ + ++ + I GNAAD + LA+ K Y
Sbjct: 33 SSGSFIPNRATNKITEIQPKIFAARCGNAADTQF----LARAVKNYLNALNITRENTDDS 88
Query: 169 TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK 228
TI A+N++ +++ +YR LS G ++ +D GPQ+Y ++ +G+ I+
Sbjct: 89 TILVASNVIRSLIVRYR---------QYLSAGVIVGGWDS-AGPQVYSIEVSGMAIKKKI 138
Query: 229 FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
GSG+ Y QA +D +YR D++ EEA A +A+ A RD SGG V + +IN G +
Sbjct: 139 ASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIRDGSSGGVVNIVQINADGAK 198
Query: 289 QVLSRDVKDIYN 300
++ R + +N
Sbjct: 199 RMTVRPAQQPFN 210
>gi|413953156|gb|AFW85805.1| hypothetical protein ZEAMMB73_646691 [Zea mays]
Length = 203
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + T ++I ++ +L T+AG AADC +W +L +C+ +E + ++I A+
Sbjct: 82 SMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGTKCRLHELSNKRRISIAGAS 141
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
LL N++ YR GLS GT++A +DE GP LY +D+ G + G +F VGSG
Sbjct: 142 KLLANILYSYR--------GMGLSIGTMIAGWDE-KGPGLYYVDSEGARLVGNRFSVGSG 192
Query: 235 AEYAQAILD 243
+ YA ILD
Sbjct: 193 SLYAYGILD 201
>gi|26353354|dbj|BAC40307.1| unnamed protein product [Mus musculus]
Length = 177
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G ++AA D LY +D+ G I GT F VGSG+ YA ++D Y DL EEAY LA
Sbjct: 70 GVIVAA-DSRATAGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLA 128
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
AIY A RD +SGG V LY + GW +V S +V D+++
Sbjct: 129 RRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHD 169
>gi|148704391|gb|EDL36338.1| mCG8712, isoform CRA_a [Mus musculus]
Length = 182
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
G ++AA D LY +D+ G I GT F VGSG+ YA ++D Y DL EEAY LA
Sbjct: 75 GVIVAA-DSRATAGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLA 133
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
AIY A RD +SGG V LY + GW +V S +V D+++
Sbjct: 134 RRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHD 174
>gi|301624549|ref|XP_002941563.1| PREDICTED: proteasome subunit beta type-11-like [Xenopus (Silurana)
tropicalis]
Length = 277
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 20/191 (10%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
C P S+ +T+ H S +L T +G++ADC + +LA+EC+ Y+ + ++
Sbjct: 86 CSPDSRKATLIH----------SHLLATTSGSSADCQLFGRALARECRIYQLRNGYMPSV 135
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK-F 229
R AA +L ++ +R K+ + + +D GP + + N G I +
Sbjct: 136 RGAAKMLSMIMMPFR----GMKVCAAFT----LCGWDRN-GPCICYVYNDGTRISSSNVI 186
Query: 230 CVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
VGSG+ YA +I+D YR + EEEA LA A+ HA RRD +SGG V +Y I G ++
Sbjct: 187 SVGSGSPYAYSIIDDGYRVGMGEEEARKLARRAVCHAGRRDAYSGGSVDVYWIREGGCER 246
Query: 290 VLSRDVKDIYN 300
D+ +Y
Sbjct: 247 DAREDLVQLYE 257
>gi|55742410|ref|NP_001007179.1| proteasome subunit beta type-11 [Danio rerio]
gi|169146057|emb|CAQ14650.1| novel protein similar to proteasomes [Danio rerio]
Length = 375
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 56/225 (24%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P+ S ++ +G+ ADC+ W L +E + Y+ ++RT ++I AA LL M+ ++
Sbjct: 110 KIMPIHSHLVVNTSGSGADCMLWERILTREMRLYQLRHRTRLSINGAAKLLSTMLHPFKG 169
Query: 187 GN------------HSSKIPNGLSFGTL----------------------------MAAY 206
N S+I S GT+ ++
Sbjct: 170 TNVCVAATLCGWDGEESQIQWKTSMGTVNVNESMAQDSTLSAISDESALGSEKRASISEQ 229
Query: 207 DEIL----------------GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+EIL GP++ + + GL + G VGSG+ YA A+LD +R +
Sbjct: 230 EEILKDVPDQQNRSTFGGRFGPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGM 289
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
+ +EA LA A++ A D +SG V L+ I +GW++ D+
Sbjct: 290 TVDEAVGLAREAVFRATHWDAYSGNNVDLFYITARGWRRREREDL 334
>gi|373249052|dbj|BAL46038.1| proteasome subunit beta 5ta [Danio rerio]
Length = 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 56/225 (24%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P+ S ++ +G+ ADC+ W L +E + Y+ ++RT ++I AA LL M+ ++
Sbjct: 106 KIMPIHSHLVVNTSGSGADCMLWERILTREMRLYQLRHRTRLSINGAAKLLSTMLHPFKG 165
Query: 187 GN------------HSSKIPNGLSFGTL----------------------------MAAY 206
N S+I S GT+ ++
Sbjct: 166 TNVCVAATLCGWDGEESQIQWKTSMGTVNVNESMAQDSTLSAISDESALGSEKRASISEQ 225
Query: 207 DEIL----------------GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+EIL GP++ + + GL + G VGSG+ YA A+LD +R +
Sbjct: 226 EEILKDVADQQNRSTFGGRFGPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGM 285
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
+ +EA LA A++ A D +SG V L+ I +GW++ D+
Sbjct: 286 TVDEAVGLAREAVFRATHWDAYSGNNVDLFYITARGWRRREREDL 330
>gi|373249054|dbj|BAL46039.1| proteasome subunit beta 5tb [Danio rerio]
Length = 362
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 125 SFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKY 184
S +V+P+ S ++ T +G +ADC W LA+E + Y+ ++R ++ AA LL +M+ +
Sbjct: 140 SPKVLPIHSHLVGTTSGTSADCALWKRILARELRLYQLRHRRRLSTGGAAKLLSHMLHPF 199
Query: 185 R-----------------TGNHSSKIPNGLSFGTLMAAYDE----------ILGPQLYML 217
+ ++ + + TL + + GP++ +
Sbjct: 200 KGTELCVAATLCGWDGDEDQDNEQPMTERYANTTLTSKSSSQSAASSGLSGVRGPRVVYV 259
Query: 218 DNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
+ GL ++G F VGSG+ YA +ILD R +S +EA A+A A+Y A RD +SG V
Sbjct: 260 CSDGLRLQGALFSVGSGSPYAYSILDGGVRWGMSAQEAAAVAREAVYRATYRDAYSGNNV 319
Query: 278 RLYKINGQGWQQVLSRDVKDIYNDRKE 304
LY + +GW++ ++K+ Y KE
Sbjct: 320 DLYHVTAKGWRRRERENLKEEYYREKE 346
>gi|9408027|emb|CAB99309.1| proteasome beta-5 subunit [Giardia intestinalis]
Length = 261
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+Q V +VI ++ IL T+AG A DC +W L ++C+ YE + + A+
Sbjct: 104 TQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDLGRKCRLYELENGERIYASSAS 163
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
L ++ + S+ +S G +++ +D P +Y D+ G I G + GSG
Sbjct: 164 KLFISTLH--------SQSGADMSVGAMISGFDSTNHPCIYYCDSEGTRIGGYLYGAGSG 215
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHA 266
+ +A I+DT+Y +++EE+A AL AIYHA
Sbjct: 216 STFAFGIVDTEYDFEMTEEQAIALGKKAIYHA 247
>gi|342326218|gb|AEL23024.1| proteasome subunit beta type 8 [Cherax quadricarinatus]
Length = 96
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 52/83 (62%)
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+DN G + G F VGSG+ YA +LD+ YR D+S+ EA L AIYHA RD +SGG
Sbjct: 2 VDNNGNRMPGNVFSVGSGSIYAYGVLDSGYRSDMSDTEAQELGRRAIYHATHRDAYSGGV 61
Query: 277 VRLYKINGQGWQQVLSRDVKDIY 299
VR+Y I GW ++ D KD++
Sbjct: 62 VRVYHIKEDGWTKITEEDNKDLH 84
>gi|339238211|ref|XP_003380660.1| proteasome subunit beta type-6 [Trichinella spiralis]
gi|316976433|gb|EFV59730.1| proteasome subunit beta type-6 [Trichinella spiralis]
Length = 558
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 97 SCELLHPVYTGGERCGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+CE H V + S S V S ++ PVS I C +G++AD +
Sbjct: 362 ACEFEHGVIIAADT--RTSSGSLVVSRVSNKISPVSEYICCMRSGSSADTQAVADIAKYQ 419
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
YE +++ + + AA + ++ +YR N ++ G ++ +D + G Q+Y
Sbjct: 420 ISVYEMEHKCSIPVSIAAEIFRSICYRYR---------NDITAGIIVCGWDSVNGGQIYS 470
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+ +G++++ GSG+ YA LDT+++P+++EEEA A+ A RD SGGC
Sbjct: 471 IPISGMIMKQCWTAGGSGSVYAIGYLDTNFKPNMTEEEANNFIRKALAIAISRDGSSGGC 530
Query: 277 VRLYKINGQGWQQVL 291
+RL I +G + L
Sbjct: 531 IRLCSITEKGMEHSL 545
>gi|115712731|ref|XP_790345.2| PREDICTED: proteasome subunit beta type-5-like [Strongylocentrotus
purpuratus]
Length = 229
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 64/197 (32%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP+ S +V +VI ++ +L T+AG AADC +W LA++C+ YE + + +++
Sbjct: 92 AGPYIASQSVK-----KVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKERISV 146
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ LL NM LY GL +
Sbjct: 147 AAASKLLANM---------------------------------LYNYKGMGLSVW----- 168
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
DLS E+A + AI+HA RD +SGG V LY + GW ++
Sbjct: 169 ------------------DLSVEDALVMGQRAIFHATHRDAYSGGVVNLYHMQETGWVKI 210
Query: 291 LSRDVKDI---YNDRKE 304
S DVKD+ Y D KE
Sbjct: 211 SSTDVKDLHYRYQDEKE 227
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F+ GTTTLGF++ G+++A DSRATA I SQ + K +
Sbjct: 67 FLHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIE 106
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AGN D + + L E + Y + M+ + A LL N++ N + P + F
Sbjct: 53 AGNVGDILSLVRLLRAEVRLYRSRVGRSMSAKALATLLANIL------NGTRYFPYLVWF 106
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YD+ P+LY +D G + E GSG E+A +ILD+ Y+P++S EE LA
Sbjct: 107 --LVGGYDD--APRLYSVDMAGGITEDKYVAAGSGMEFAFSILDSQYKPEMSVEEGVKLA 162
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
AI A +RD+ +G + + I +G++++ +V I
Sbjct: 163 VRAINSAIKRDVFTGEGITVVTITEKGYRELSEEEVNTI 201
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ + + AGN D + + L E K Y + M+++ A L N++
Sbjct: 16 KIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALATLTANIL----- 70
Query: 187 GNHSSKIPNGLSFG-TLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
N + P FG L+ YDE P LY +D G + E GSG E+A A+L+ +
Sbjct: 71 -NGTKYFP---YFGWFLIGGYDE--KPNLYSVDMAGGMTEDKYVSAGSGMEFAYAVLENE 124
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
Y+ D+S +E LA AI A +RD+ +G + + KI +G++++ ++V I
Sbjct: 125 YKEDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEGYRELDKKEVDKI 177
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V P++ + AG D + + +L E + YE + + +R A +L ++ Y+
Sbjct: 50 KVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSYKL 109
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ G +DE GPQ+Y+LD G LIE +GSG A I++ +Y
Sbjct: 110 APLMTEVVVG--------GFDE-KGPQIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEY 160
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
R D+ +EA LA SAI A RD SG V + +I +G+
Sbjct: 161 REDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRITEEGY 201
>gi|354482254|ref|XP_003503314.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-5-like
[Cricetulus griseus]
Length = 256
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 138 TLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGL 197
T+AG AADC +W L + C+ YE + +++ A+ LL NMV Y+ L
Sbjct: 94 TMAGGAADCSFWEGLLPQXCRIYELLNKECISVAGASKLLANMVYHYKI--------MXL 145
Query: 198 SFGTLMAAYD--EILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEA 255
S GT++ + + E L QL+ + I GT F VG G+ Y ++D DL EE
Sbjct: 146 SVGTMIRSCNKRESLLLQLHYVVGERKSISGTIFFVGFGSMYIYRVVDQGXSYDLEVEET 205
Query: 256 YALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYN 300
Y LA IY A RD++S G + LY + G V S V D++
Sbjct: 206 YDLAHXDIYQATYRDVYSXGELNLYHVWEDGXICVSSDSVADLHK 250
>gi|260798452|ref|XP_002594214.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
gi|229279447|gb|EEN50225.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
Length = 113
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 196 GLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEA 255
GLS GT++ +D+ GP LY +D+ G + F VGSG+ YA +LD+ Y D+ EEA
Sbjct: 2 GLSMGTMIVGWDK-RGPGLYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEA 60
Query: 256 YALATSAIYHACRRDIHSG-GCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
Y L AIYHA R + + +Y + GW +V DV D++ KE
Sbjct: 61 YELGKRAIYHATHRTLTAAVWSTVMYHMKETGWIKVSQTDVMDLHYKYKE 110
>gi|169625204|ref|XP_001806006.1| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
gi|160705619|gb|EAT76707.2| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
Length = 227
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 144 ADCVYWLHSLAKECKGYECKYR-----TGMTIRHAANLLVNMVRKYRTGNHSS------- 191
A WL ++ + C + T + R ++V + GN +
Sbjct: 43 AQSASWLRAMTDDYSNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKV 102
Query: 192 -KIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+I N L GT MA + GP LY +D+ G + G FCVGSG +A +LD +Y+ DL
Sbjct: 103 IEINNCL-LGT-MAGGAAVQGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYKYDL 160
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
+++A L +I A RD +SGG + LY + GW + D I+ + K
Sbjct: 161 EDDDALELGRRSILAATHRDAYSGGFINLYHVKEDGWVKHGFSDTNPIFWETK 213
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FR+ GII+ATDSRATA + I SQ + K +
Sbjct: 68 GTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIE 104
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E K Y + M+++ A LL NM+ N + +P F
Sbjct: 56 AGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANML------NGARMLPYLAWF 109
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ +DE P+LY +D G + E GSG E+A ++LD++YR DL E +A
Sbjct: 110 --LVGGFDE--KPRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIA 165
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
AI A +RD+ SG + + I +G++++ + +K I
Sbjct: 166 VEAINSAIKRDVFSGDGIMVVTITEEGYRELSNSRLKAI 204
>gi|402467038|gb|EJW02410.1| hypothetical protein EDEG_03164 [Edhazardia aedis USNM 41457]
Length = 204
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+P + ++ ++ +I C +G+AAD +Y + + + E Y T T++ AA
Sbjct: 37 IPSRYTDKLTKLTDTIYCCRSGSAADTMYIANLITMYLEKQEYLYNTKPTVKLAATYCQE 96
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y P+ L+ G ++A +DE GP +Y + G +++G GSG+ +
Sbjct: 97 LIYSY---------PDFLA-GMIVAGFDE-FGPSVYTITLGGTIVKGDYAIGGSGSIHLY 145
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+ D ++R D ++E+ A A+ A +RD SGGCVR+ +I ++
Sbjct: 146 SFFDENFRNDFTDEQGLAFVKKAVSAAIKRDNFSGGCVRMARITNNNLER 195
>gi|454256|emb|CAA82203.1| Pre2p [Saccharomyces cerevisiae]
Length = 114
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 211 GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
GP +Y +D+ G ++G FCVGSG +A +LD++Y+ DLS E+A L +I A RD
Sbjct: 11 GPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRD 70
Query: 271 IHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKE 304
+SGG V LY + GW + DV +++ KE
Sbjct: 71 AYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKE 104
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E + Y+ M+++ A LL N++ N + P + F
Sbjct: 22 AGDVGDILSLVRLLRAEARLYKANVGKPMSVKALATLLANIL------NGTKYFPYFVWF 75
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YDE P+++ +D G + E GSG E+A ++LD++Y+ DLS +E LA
Sbjct: 76 --LVGGYDE--EPRMFSVDMAGGVTEDKYVAAGSGMEFAYSVLDSEYKEDLSVKEGIKLA 131
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
AI A +RD+ SG + + I +G+Q+ + +K I
Sbjct: 132 VKAINVAIKRDVFSGDGILVVTITREGYQEYSNSTLKAI 170
>gi|402594536|gb|EJW88462.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 151
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 160 YECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDN 219
YE + +T +T+ A+ N++ YR NH GLS G+++A YD+ GP ++ +D+
Sbjct: 2 YELREKTEITVAAASKYFQNVLYSYR--NH------GLSVGSMIAGYDK-RGPAIFKVDS 52
Query: 220 TGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRL 279
G I+ +GSG+ A ILD Y+P +++EEAY L I HA RD SGG +
Sbjct: 53 EGQRIQLRLCSIGSGSLSAYGILDNFYQPKMTDEEAYKLGRRGIMHATYRDTGSGGVCNM 112
Query: 280 YKINGQGWQQVLSRDVKDIY 299
I+ + + DV +Y
Sbjct: 113 VHISPTEKIRFPAFDVSQLY 132
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S++S + + ++ P++ +++ +G+AAD Y
Sbjct: 31 YNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYT 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+TI ++ + + YR LS L+A +DE LG Q+Y + G
Sbjct: 91 MTENKPVTIYRSSQIFRQFLYNYR---------EQLSASVLVAGWDEELGGQVYAIPIGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ GSG+ + Q LD+ +RP+L+ EE A+ A+ A RD SGG VRL
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRLAV 201
Query: 282 INGQGWQQVLSRDVK 296
IN G Q L R K
Sbjct: 202 INKAGSQFELFRPDK 216
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 114 FSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHA 173
F SS+V +V ++ + AG D L E K YE ++ + +R
Sbjct: 30 FVLSSSVK-----KVYAITPHVGVGFAGLMGDVNILKRMLEMEAKYYELQHGREIRVRGL 84
Query: 174 ANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGS 233
A +L ++ Y+ ++I G YD+ GPQLY+LD G LIE +GS
Sbjct: 85 AKMLSVILYSYKLAPMLTEIVVG--------GYDDN-GPQLYILDPVGSLIEEKYAALGS 135
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
GA+ A ++ Y PD+S EEA L A+ RD+ SG V + KI +G ++
Sbjct: 136 GAQLALGYIEPRYNPDISLEEAEKLVVEAVKTVIERDVLSGDGVDILKITAKGPEE 191
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E K Y + M+++ A LL N++ N + P F
Sbjct: 56 AGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIM------NGAKYFPYLAWF 109
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YDE P+LY +D G + E GSG E+A +ILD++Y+ +L+ EE LA
Sbjct: 110 --LVGGYDE--KPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLA 165
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
AI A +RD+ SG + + I +G++++
Sbjct: 166 VKAINTAIKRDVFSGDGILVVTITKEGYKEL 196
>gi|348541141|ref|XP_003458045.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Oreochromis niloticus]
Length = 217
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L ++ GG G S++S V T +VI V I C +AG+ AD + +
Sbjct: 19 ILAAIFDGGVVIGSDSRASMGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVIKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + AA++L ++ K + + L G L A +D+ GPQ+Y
Sbjct: 79 HLSFHSVQMESPPQVIAAASVLKDLCYKNK---------DELQAGFLTAGWDKKNGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+LI GSG+ Y +D Y+P++++EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMLISQQVTIGGSGSTYIYGYVDAKYKPNMTKEECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 190 VAHLVVITEKGVEHVV 205
>gi|145356837|ref|XP_001422631.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582874|gb|ABP00948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 232
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 23/238 (9%)
Query: 78 DHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSS 134
DH P+S + ++ Y G G S++ST V + S ++ + +
Sbjct: 2 DHGFDVPVSMGTT---------IMAVRYADGVILGADSRTSTGTYVANRASDKITQICDN 52
Query: 135 ILCTLAGNAAD---CVYWLHSLAKECKGYECKYRTGM--TIRHAANLLVNMVRKYRTGNH 189
+ +G+AAD ++ LA+E G + L+ N+ + N
Sbjct: 53 VWMCRSGSAADTQNVAAYVSRLAQEHAVSVSSAAAGADEVLTCDVKLVANLTKTIAYENK 112
Query: 190 SSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPD 249
+ L G ++A +D LGPQ+Y + G ++E GSG+ Y D ++ D
Sbjct: 113 -----DRLQAGMIIAGWDRKLGPQVYGIPLGGSMVEAPFTVGGSGSAYVYGWCDDTFKED 167
Query: 250 LSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEAPP 307
+S+EEA A T+AI A RD SGG +RL I+G+G ++ + + ++ + D E PP
Sbjct: 168 MSKEEAQAWVTNAISLAIARDASSGGVIRLVTIDGKGCERKMLQPIEHVLCD-DELPP 224
>gi|226471268|emb|CAX70715.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 95
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 214 LYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHS 273
+Y +D G G F VGSG+ YA +LD Y+ ++S+E+AY LA +I+HA RD S
Sbjct: 4 VYYVDTDGNRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAAS 63
Query: 274 GGCVRLYKINGQGWQQVLSRDVKDIY 299
GG V LY + GW+ + DV ++Y
Sbjct: 64 GGFVNLYHMKEDGWKFIGIFDVGELY 89
>gi|634095|emb|CAA58746.1| D13094 [Schizosaccharomyces pombe]
Length = 147
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP S TV +VI ++ +L TLAG AADC +W L EC+ ++ + + +++
Sbjct: 26 AGPLIASQTVK-----KVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISV 80
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
A+ +L N+ Y+ GLS GT++A + G LY +D+ G ++G F
Sbjct: 81 SAASKILSNITYSYK--------GYGLSMGTMLAGTGKG-GTALYYIDSDGTRLKGDLFS 131
Query: 231 VGSGAEYAQAILDTDY 246
VGSG+ +A +LD+ Y
Sbjct: 132 VGSGSTFAYGVLDSGY 147
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL FRY GI++ DSRA+A LI SQ + K +
Sbjct: 4 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIE 40
>gi|393909340|gb|EFO25921.2| proteasome A-type and B-type family protein [Loa loa]
Length = 232
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 83 PPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTL 139
PP +++++ G + L+ + GG G S++S+ + + ++ PV++ ++
Sbjct: 6 PPRHFTAENVDMGTT--LIAMEFDGGVVVGTDSRTSSGSYISSRATDKITPVTNRMVVCR 63
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
+G+AAD + + Y +T+ +A + N + KYR + LS
Sbjct: 64 SGSAADTQAISDIVKYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYR---------DSLSA 114
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+A YD++ G QLY + G + GSG+ + Q LD+ ++ ++ E+ +
Sbjct: 115 SVLVAGYDDVEGGQLYAIPLGGYVTRQRCAASGSGSTFVQGFLDSQWKSGMTAEKCKEIV 174
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+A+ A RD SGG +RL I+ G Q++L R
Sbjct: 175 LNAVALATIRDGSSGGVIRLAVIDKTGTQRMLIR 208
>gi|402468273|gb|EJW03457.1| hypothetical protein EDEG_02222 [Edhazardia aedis USNM 41457]
Length = 184
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+VI ++S +L T+AG AADC YW + CK Y + ++ HA+ L N++ Y+
Sbjct: 64 KVIEINSHLLGTMAGGAADCQYWEKVMGIHCKRYMLQENKRISAAHASRYLSNLIYNYK- 122
Query: 187 GNHSSKIPNGLSFGTLMAAYD---EILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
GLS GT++ +D P +Y +DN G ++G F VGSG+ A IL
Sbjct: 123 -------GYGLSMGTMVCGFDYCGTKTVPAIYYVDNDGRRVKGDLFSVGSGSTIAYGILQ 175
Query: 244 TDYRPDLSEE 253
D+R D+ ++
Sbjct: 176 -DHRFDMEKK 184
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
F GTTTL F + +G+I+A DSRATA I SQ + K +
Sbjct: 28 FEKGTTTLAFTFKDGMIIAVDSRATAGSYIASQSIQKVIE 67
>gi|222138149|gb|ACM45577.1| LMP7 [Scophthalmus maximus]
Length = 273
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A
Sbjct: 92 SAGSYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAP 151
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYD-EILGPQLYMLDNTGLLIEGTKFCVGS 233
+ + R +GLS G+++ +D E G ++M+ L + VG+
Sbjct: 152 SCCQHDAGLQR---------HGLSMGSMICGWDREGPGCTMWMITGRVCLAACSLPAVGA 202
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+ A + + EEAY L I HA RD +SGG V +Y + GW +V
Sbjct: 203 ASPTAWW---QRFPGRHATEEAYELGRRGIVHATHRDAYSGGVVNMYHMREDGWIKVCKD 259
Query: 294 DVKDI 298
DV ++
Sbjct: 260 DVSEL 264
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFKHGVIVAVDSRASAGSYLASNDVNKVIE 107
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E K Y ++ M+ R A LL N++ Y+ P F
Sbjct: 53 AGDVGDILNLVRLLRAEAKLYYAQFGREMSARALATLLANILNGYKY------FPYMAWF 106
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YDE +LY +D G + E GSG E+A +ILD +Y D++ +E LA
Sbjct: 107 --LVGGYDE--KARLYSVDAVGGITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLA 162
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
AI A +RD+ SG + + I +G+ ++ + +K I
Sbjct: 163 VKAINTAIKRDVFSGDGILVVTITKEGYSEISNAKLKAI 201
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V V+ + AG AD L + YE + + T++ A LL ++ R
Sbjct: 41 KVFIVNDKLAIASAGIIADMQALAKILKLNARSYELEVKKKPTVKAMAKLLSVVMFSRRF 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ L+ DE GP L ++D G LIE +G+GA+ A ++LD Y
Sbjct: 101 MPFYAEV--------LVGGVDE-EGPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDASY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
RPD++ EEA LA A+ A RD SGG + L ++G G ++
Sbjct: 152 RPDMTVEEAKKLAVQAVKAAIERDPVSGGGIDLVVVDGGGARE 194
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
+++ I AG D + + L E K YE ++ + R A LL ++ Y+
Sbjct: 44 ITNHIGVGFAGLMGDVNFLVKVLRLEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPML 103
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+++ ++ YDE GP LY+LD G +IE VGSGA+ A ++ Y P L
Sbjct: 104 TEV--------VVGGYDE-EGPSLYILDPVGSVIEEKYVAVGSGAQLALGYIEPRYNPGL 154
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
+EA LA +A+ RD+ SG + L I+ G+Q
Sbjct: 155 GLKEAEELAVNAVKTVIERDVLSGDGIDLVVIDKNGYQ 192
>gi|193716235|ref|XP_001951926.1| PREDICTED: proteasome subunit beta type-6-like [Acyrthosiphon
pisum]
Length = 243
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
++ +Y GG G S+++T + + + ++ V +I C +G+AAD +A
Sbjct: 28 IIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVCDNIYCCRSGSAADTQAITDIVAYY 87
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
+ +R AAN+ N++ + R + L+ G ++A +D G Q+Y
Sbjct: 88 MDLTSIQMDEPPLVRAAANVFKNLIYENR---------HQLTAGVIVAGWDSRFGGQVYS 138
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
++ +G +++ GSG+ Y +D+ Y+ ++++E L +AI A +RD SGG
Sbjct: 139 INVSGTIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLNAISLAIKRDGSSGGV 198
Query: 277 VRLYKINGQGWQQ---VLSRDVKDIYNDRKEAPP---GGGD 311
VR+ IN G Q L + Y++ E P GGD
Sbjct: 199 VRMGVINHTGQIQRKLTLGDQLPKFYDNIYEEKPVEVSGGD 239
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 14/184 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V + + +V+ +S SI T AG AD + + E YE + + + A +LL
Sbjct: 33 VANKNAEKVMAISGSIGITTAGMVADLQAMVRLMRSELTLYEIRSGSKLDTDGAVSLLSA 92
Query: 180 MVRKYRTGNHSSKIPNGLSFGT-LMAAYDEILGPQLYMLDNTGLLIEGT-KFCV-GSGAE 236
++ + ++ L +G ++ YD P+L+ +D G +G KF V GSG
Sbjct: 93 VL-------FNKRLSLNLIYGEFIVGGYDT--APKLFSIDEAGG--QGKDKFTVTGSGGV 141
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
+A +L+ DY+ ++SEEEA LA AI + RRD+++G + + IN +G++++ +++
Sbjct: 142 FALGVLEGDYKDNMSEEEAVKLAYKAISSSIRRDVYTGEGIDIAVINKKGYKKLSDEEIQ 201
Query: 297 DIYN 300
N
Sbjct: 202 KTIN 205
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
TGTTTLG Y +G+ILA D RATA+ ++ ++ K S
Sbjct: 6 TGTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAIS 45
>gi|410932678|ref|XP_003979720.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 133
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 211 GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
GP LY +D G G F GSG YA A++D+ R D++ EEAY L I +A RD
Sbjct: 37 GPGLYYVDGNGNRFSGQMFSTGSGNSYAYAVVDSGLREDMTVEEAYDLGRRGIVYATHRD 96
Query: 271 IHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+SGG V +Y + GW +V DV +
Sbjct: 97 AYSGGVVNMYHMMEDGWIKVCQDDVSQL 124
>gi|2055299|dbj|BAA19760.1| proteasome subunit Y [Xenopus laevis]
Length = 230
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ PV I C +G+AAD ++ + +
Sbjct: 38 FDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAIADAVTYQLGFHS 97
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL M +YR L G ++A +D+ G Q+Y + G
Sbjct: 98 IELDGPPLVHTAANLFKEMCYRYR---------EDLMAGIIVAGWDKRKGGQVYTVPMGG 148
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D+ YRP +++EE +A+ A RD SGG +RL
Sbjct: 149 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTANALALAMERDGSSGGVIRLAA 208
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 209 ITEEGVER 216
>gi|148228778|ref|NP_001081217.1| proteasome subunit Y [Xenopus laevis]
gi|76779604|gb|AAI06526.1| LOC397716 protein [Xenopus laevis]
Length = 233
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ PV I C +G+AAD ++ + +
Sbjct: 41 FDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAIADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL M +YR L G ++A +D+ G Q+Y + G
Sbjct: 101 IELDGPPLVHTAANLFKEMCYRYR---------EDLMAGIIVAGWDKRKGGQVYTVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D+ YRP +++EE +A+ A RD SGG +RL
Sbjct: 152 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTANALALAMERDGSSGGVIRLAA 211
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 212 ITEEGVER 219
>gi|239788939|dbj|BAH71121.1| ACYPI009408 [Acyrthosiphon pisum]
Length = 243
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
++ +Y GG G S+++T + + + ++ V +I C +G+AAD +A
Sbjct: 28 IIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVCDNIYCCRSGSAADTQAITDIVAYY 87
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
+ +R AAN+ N++ + R + L+ G ++A +D G Q+Y
Sbjct: 88 MDLTSIQMDEPPLVRAAANVFKNLIYENR---------HQLTAGVIVAGWDSRFGGQVYS 138
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
++ +G +++ GSG+ Y +D+ Y+ ++++E L +AI A +RD SGG
Sbjct: 139 INVSGTIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLNAISLAIKRDGSSGGV 198
Query: 277 VRLYKINGQGWQQ---VLSRDVKDIYNDRKEAPP 307
VR+ IN G Q L + Y++ E P
Sbjct: 199 VRMGVINHTGQIQRKLTLGDQLPKFYDNIYEEKP 232
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V + +V P++ + AG D + + +L E + Y+ + + +R A +L
Sbjct: 45 VLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRLEAENYKLQLEREIRVRGLAKILSL 104
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ Y+ ++I ++ YD+ GPQ+Y+LD G LIE +GSG A
Sbjct: 105 LLYSYKLAPLMTEI--------VVGGYDD-KGPQIYVLDPVGSLIEDKYVALGSGGPIAL 155
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
I++ +YR D+ +EA LA SAI A RD SG V + +I +G+
Sbjct: 156 GIIEKEYREDIDIDEAEKLAVSAIREAIERDAVSGDGVDVLRITEEGY 203
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +++ ++ T+AG AD ++ +E + YE + +T++ A LL N
Sbjct: 41 IASRTVKKIVKITDYAAMTIAGLVADAQMLADAIREEARLYETMNKRKLTVKGMATLLAN 100
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ + + ++ G YD P+LY LD G + E GSG+ A
Sbjct: 101 VLFSTKYYPYLVQLIVG--------GYDT--EPRLYNLDYFGSITEEKMTSTGSGSPVAL 150
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG-------WQQVLS 292
+L+ DYRPDLS EEA LA AI A RD +G V + I+ G QQ+LS
Sbjct: 151 GVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSATGDGVDVIAISSGGIRESFIPLQQLLS 210
>gi|1045471|gb|AAA80235.1| large multifunctional protease 7 [Homo sapiens]
Length = 79
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 224 IEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKIN 283
+ G F GSG YA ++D+ YRP+LS EEAY L AI +A RD +SGG V +Y +
Sbjct: 3 LSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMK 62
Query: 284 GQGWQQVLSRDVKDI 298
GW +V S DV D+
Sbjct: 63 EDGWVKVESTDVSDL 77
>gi|147899680|ref|NP_001089683.1| uncharacterized protein LOC734745 [Xenopus laevis]
gi|76780130|gb|AAI06328.1| MGC130855 protein [Xenopus laevis]
Length = 247
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ PV I C +G+AAD ++ + +
Sbjct: 41 FDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAIADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D+ G Q+Y + G
Sbjct: 101 IELEGPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDKRRGGQVYTVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D+ YRP +S+EE +A+ A RD SGG +RL
Sbjct: 152 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMSKEECLKFTANALALAMERDGSSGGIIRLAA 211
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 212 ITEEGVER 219
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V H + ++ ++ I+ T+AG+ D + + E Y+ + M+++ AA
Sbjct: 29 SMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKMSVKAAA 88
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
++ N++R + TL+ D P LY LD G +IE T GSG
Sbjct: 89 SVTANILR-----------SGPMYVQTLLGGMDGD-KPSLYSLDPAGGMIEDTYISTGSG 136
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A +L+ Y +++ +E +A AI A RD SG + K+ G++ +
Sbjct: 137 SIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVAKVTKDGFEMLDKEK 196
Query: 295 VKDI 298
V DI
Sbjct: 197 VNDI 200
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V ++ + AG AD L YE + R T+R A LL ++ R
Sbjct: 41 KVFIINDKLAIASAGIIADMQTLARILKLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRL 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ L+ DE GP L ++D G LIE +G+GA+ A ++LD Y
Sbjct: 101 LPFYAEV--------LVGGVDE-EGPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDATY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
RPD+S +EA LA AI A RD SGG + L ++ G ++
Sbjct: 152 RPDISLQEAKKLAVQAIKAAIERDPVSGGGIDLAVVDNNGARE 194
>gi|225708064|gb|ACO09878.1| Proteasome subunit beta type 6 precursor [Osmerus mordax]
Length = 231
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 39 FDGGVVMGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 98
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL M +YR L G ++A +D+ G Q+Y + G
Sbjct: 99 IELDEAPLVQTAANLFKQMCYRYR---------EELMAGIIVAGWDKRRGGQVYTVPMGG 149
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D++Y+ +++EE T A+ A RD SGG RL
Sbjct: 150 MLVRQPVSVGGSGSSYIYGFMDSNYKTGMTKEECLHFTTQALALAMERDGSSGGVARLAA 209
Query: 282 INGQGWQQ--VLSRDVKDIYN 300
I +G ++ VL + +N
Sbjct: 210 ITEEGVERRVVLGNQLPKFFN 230
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 14/182 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V + + +V+ +SS+I T AG AD + + E YE + + + A +LL
Sbjct: 33 VANKNAEKVMSISSNIGVTTAGMVADLQAMVRLMRSELTLYEIRAGSKLDTDGAVSLLSA 92
Query: 180 MVRKYRTGNHSSKIPNGLSFGT-LMAAYDEILGPQLYMLDNTGLLIEGT-KFCV-GSGAE 236
++ + ++ L +G ++ YD P+L+ +D G +G KF V GSG
Sbjct: 93 VL-------FNKRLSLNLIYGEFIIGGYDT--EPKLFSIDEAGG--QGKDKFTVTGSGGV 141
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
+A +L+ DY+ +++EEE LA AI + RRD+++G V + IN +G++++ +++
Sbjct: 142 FALGVLEGDYKDNMTEEEGIKLAYKAISSSIRRDVYTGEGVDIAVINKKGYKKLTDEEIQ 201
Query: 297 DI 298
I
Sbjct: 202 KI 203
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
TGTTTLG Y +G+ILA D RATA+ ++ ++ K S
Sbjct: 6 TGTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSIS 45
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S++S + + ++ P++ +++ +G+AAD Y
Sbjct: 34 YNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYT 93
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+TI ++ + + YR LS L+A +D LG Q+Y + G
Sbjct: 94 MTENKPVTIYRSSQIFRQFLYNYR---------EQLSASVLVAGWDSELGGQVYAIPIGG 144
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ GSG+ + Q LD+ +RPDL+ EE A+ A+ A RD SGG VRL
Sbjct: 145 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATFRDGSSGGVVRLAV 204
Query: 282 INGQGWQQVLSRDVK 296
I+ G + L R K
Sbjct: 205 IDKTGSKFELFRPDK 219
>gi|170594089|ref|XP_001901796.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158590740|gb|EDP29355.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 209
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S + + ++ PV+ ++ +G+AAD + + Y +T+ +A
Sbjct: 16 SSGSYISSRATDKITPVTDRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEEVTVGRSA 75
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+ N + KYR + LS L+A YD+I G QLY + G + G G
Sbjct: 76 QIFRNFLYKYR---------DSLSASVLVAGYDDIEGGQLYAIPMGGYVTRQRCAASGRG 126
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+ + Q LD+ ++P ++ E+ L +A+ A RD SGG +RL I+ G ++ L R
Sbjct: 127 STFVQGFLDSQWKPGMTAEKCKELVLNAVALATIRDGSSGGVIRLAVIDKTGTKRTLIR 185
>gi|395503110|ref|XP_003775283.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-11-like, partial [Sarcophilus harrisii]
Length = 191
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 169 TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK 228
++ AA L M+ +YR GL T + +D+ GP L+ + + G L+ G
Sbjct: 3 SVAGAAKRLAAMLFRYRG--------LGLCVATALGGWDQA-GPALFYVYSDGTLLAGDV 53
Query: 229 FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
F GSG+ YA +LD YR D++ +EAY LA A+ HA RRD +SGG V LY + GW+
Sbjct: 54 FSAGSGSPYAYGVLDRGYRYDMTVQEAYCLARRAVAHAARRDAYSGGSVDLYHVKESGWE 113
Query: 289 QVLSRDVKDIYNDRKEA 305
+V D +Y +EA
Sbjct: 114 RVSREDACALYAGPQEA 130
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ H +++ +S + T AG AD L E K YE ++ M+++ AA L N
Sbjct: 39 IVHKRVEKIVKISDYMAMTTAGLVADAQVLADVLRMEVKNYELFHKKRMSVKAAATFLSN 98
Query: 180 MVRKYRTGNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYA 238
++ HS++ P + L+ +D P+LY LD G + E GSG+ A
Sbjct: 99 VL-------HSARFYPYIVQL--LVGGFDT--APRLYSLDWFGTVAEEEFLVTGSGSPMA 147
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+++ +Y P++ EE LA A++ A RRD SG + + I+ G
Sbjct: 148 VGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGIDVAVIDRNG 195
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 3 ITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSS 43
+ GTTT+G R + ++LA D RATA + IV +++ K + S
Sbjct: 11 LKGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKIS 51
>gi|308810972|ref|XP_003082794.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
tauri]
gi|116054672|emb|CAL56749.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
tauri]
Length = 265
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 66 SQRSHCVAETQQDHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPH 122
SQRS C A H +PP +++ I++ Y G G S++ST V +
Sbjct: 28 SQRS-CRAFFATTH-RAPPRARAQTTIMAVK--------YADGVVLGADSRTSTGTYVAN 77
Query: 123 NTSFQVIPVSSSILCTLAGNAAD---CVYWLHSLAKE--CKGYECKYRTGMTIRHAANLL 177
S ++ P+ ++ +G+AAD ++ LA+E I+ L+
Sbjct: 78 RASDKITPICENVWMCRSGSAADTQNVAAYVSRLAQEHAVSVSSAGADADEGIKCDVKLV 137
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+ +K N + L G ++A YD LGPQ+Y + G ++E GSG+ Y
Sbjct: 138 ANITQKIAYQNK-----DRLQAGMIIAGYDRKLGPQVYGIPLGGAMMENPFTVGGSGSAY 192
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
D +R ++S+EEA A AI A RD SGG +RL I+ G
Sbjct: 193 IYGWCDDTFRENMSKEEAQAWVKRAISLAIARDASSGGVIRLVTIDATG 241
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++ +S+ + T++G AD L +E + YE + ++R A+LL N++
Sbjct: 58 KIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVASLLSNIL----- 112
Query: 187 GNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
SSK P + ++ YD P+LY LD G + E GSG+ A +L+
Sbjct: 113 --FSSKFFPYIVQL--IVGGYDT--QPRLYTLDLFGSITEDKYTATGSGSPIAYGVLEER 166
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
YR DLS EEA +AT+AI A RD SG + I QG+++
Sbjct: 167 YREDLSVEEAIKVATTAIRSAVLRDAASGDGADVVVIGPQGYEE 210
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + M R ANLL N++
Sbjct: 41 KILPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMKTRAMANLLSNIL----- 95
Query: 187 GNHSSKIPNGLSFGTLMAAY-DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
N + P + L+ Y DE P+L LD G L+ GSG+ +A AI++
Sbjct: 96 -NENKWFPYMVQI--LIGGYVDE---PELASLDALGGLVFDEYTATGSGSPFAIAIIEDG 149
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSG 274
YR D+S EEA LA A+ A +RD+++G
Sbjct: 150 YREDMSVEEAKELAVRAVRTAGKRDVYTG 178
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 133 SSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSK 192
+ L AG D + E K YE +++ AA LL ++ +Y+ S+
Sbjct: 43 NKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISE 102
Query: 193 IPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSE 252
I L DE GPQLY+LD G LIE VGSGA A +L+++Y P++S
Sbjct: 103 I--------LFGGVDE-KGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSL 153
Query: 253 EEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+ A L T AI + RDI SG + L I+ +G
Sbjct: 154 DVATQLITKAIKASIERDITSGDGIDLAIIDKKG 187
>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
Length = 239
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S++S + + ++ P++ +++ +G+AAD Y
Sbjct: 31 YNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIADIAKYHIDVYT 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+TI ++ + + YR LS L+A +D LG Q+Y + G
Sbjct: 91 MTENKPVTIYRSSQIFRQFLYNYR---------EQLSASVLVAGWDSELGGQVYAIPIGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ GSG+ + Q LD+ +RPDL+ +E A+ A+ A RD SGG VRL
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDGSSGGVVRLAV 201
Query: 282 INGQGWQQVLSRDVK 296
I+ G + L R K
Sbjct: 202 IDKTGSKFELFRPDK 216
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V H + ++ ++ I+ T+AG+ D + + E Y+ + ++++ AA
Sbjct: 29 SMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKISVKAAA 88
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
++ N++R + TL+ D P LY LD G +IE T GSG
Sbjct: 89 SVTANILR-----------SGPMYVQTLLGGMDGD-KPSLYSLDPAGGMIEDTYISTGSG 136
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ A +L+ Y +++ +E +A AI A RD SG + K+ G++ +
Sbjct: 137 SIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVAKVTKDGFEMLDKEK 196
Query: 295 VKDI 298
V DI
Sbjct: 197 VNDI 200
>gi|387017884|gb|AFJ51060.1| Proteasome subunit Y [Crotalus adamanteus]
Length = 233
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ + I C +G+AAD ++A + +
Sbjct: 41 FEGGVVIGADSRTTTGSYIANRVTDKLTQIHDRIFCCRSGSAADTQAIADAVAYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL M +YR L+ G L+A +D G Q+Y + G
Sbjct: 101 IELDQQPLVHTAANLFKEMCYRYR---------EDLTAGILVAGWDRRKGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D Y+P +S+EE +A+ A RD SGG +RL
Sbjct: 152 MMVRQPFSIGGSGSSYIYGFVDVSYKPGMSKEECLTFTANALALAMDRDGSSGGVIRLAA 211
Query: 282 INGQGWQQ 289
I G ++
Sbjct: 212 ITKDGVER 219
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + MT + ANLL N++
Sbjct: 39 KILPITDRIAITTAGSVGDVQMLARMLEAEARYYQFTWGKPMTAKAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y E P L LD G LI GSG+ +A AIL+ Y
Sbjct: 94 -NENKWFPYLVQI--IIGGYVE--EPTLANLDPLGGLIFDDYTATGSGSPFAIAILEEGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
R D+S EEA LA A+ A +RD+++G +++ I +G ++
Sbjct: 149 RKDMSIEEARELAIRAVRTAGKRDVYTGDRKIQVVVITKEGMKE 192
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V + + AG D + + L E K Y K M+++ A L N++
Sbjct: 40 KVFQIDDHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKALATLTSNIL----- 94
Query: 187 GNHSSKIPNGLSFGT--LMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
HS + G ++ L+ YD P+LY +D G + E GSG E+A ++L+
Sbjct: 95 --HSGR---GFAYMAWFLVGGYDS--APRLYSIDAAGGVTEDRFTAAGSGMEFAFSVLEE 147
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+YR + EE LA AI A +RD+ +GG V L I +G+++ ++K +
Sbjct: 148 NYRDGIPLEEGVKLALRAIKAATKRDVFTGGGVTLVTITEEGYREWSEEELKSL 201
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ P++ AG D + L E K YE ++ + R A LL ++ Y+
Sbjct: 42 KLFPITEHTAVGFAGLTGDMNFLYRVLKTEAKNYELEHGREIKTRSLAKLLSIILYSYKL 101
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
++ ++ +DE P L++LD G L+E +GSG++ A +I++ Y
Sbjct: 102 FPMLTE--------AVVGGFDE--APSLFVLDAVGSLLEERYTALGSGSQLALSIIEQSY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
R D+ EEA LA A+ A RD+ SG V + I +G +
Sbjct: 152 REDMPLEEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGIK 193
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V + + AG+ D + + L E K Y K ++++ A L N++
Sbjct: 40 KVFQIDDHLALAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALATLTSNIL----- 94
Query: 187 GNHSSK-IPNGLSFG-TLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDT 244
H S+ +P FG L+A YDE P LY LD G + E GSG E A A+L+
Sbjct: 95 --HGSRFMP---YFGWFLIAGYDE--KPALYSLDMAGGVTEDKFTAAGSGMELAFAVLED 147
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
Y+ D++ EE LA AI A RRD+ +G + L + +G++++
Sbjct: 148 GYKDDINVEEGVKLALKAIKIATRRDVFTGDGITLVTVTEEGYREL 193
>gi|3122620|sp|Q29576.1|PSB8_PIG RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i
Length = 104
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 168 MTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGT 227
+++ A+ L NM+ +YR GLS G+++ +D+ GP LY +D G + G
Sbjct: 11 ISVSAASKLXSNMMYQYR--------GMGLSMGSMICGWDKK-GPGLYYVDENGTRLSGN 61
Query: 228 KFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
F GSG YA ++D+ +R DLS EEAY L AI HA RD
Sbjct: 62 MFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E K Y+ + MT + ANLL N++
Sbjct: 39 KILPITDRIAITTAGSVGDLQALARMLEAEAKYYQFTWGKPMTAKAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N S P + ++ Y E P L LD G LI GSG+ +A AIL+ Y
Sbjct: 94 -NESKWFPYMVQI--IIGGYVE--EPTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
+ D+S E+A LA A+ A +RD+++G +++ I +G ++
Sbjct: 149 KEDMSIEDARELAIKAVRTAGKRDVYTGERKIQVITITKEGMKE 192
>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
Length = 239
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S++S + + ++ P++ +++ +G+AAD Y
Sbjct: 31 YNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIADIAKYHIDVYT 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+TI ++ + + YR LS L+A +D LG Q+Y + G
Sbjct: 91 MTENKPVTIYRSSQIFRQFLYNYR---------EQLSASVLVAGWDAELGGQVYAIPIGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ GSG+ + Q LD+ +RPDL+ +E A+ A+ A RD SGG VRL
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDGSSGGVVRLAV 201
Query: 282 INGQGWQQVLSRDVK 296
I+ G + L R K
Sbjct: 202 IDKTGSKFELFRPDK 216
>gi|312070446|ref|XP_003138150.1| proteasome A-type and B-type family protein [Loa loa]
Length = 223
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++S+ + + ++ PV++ ++ +G+AAD + + Y
Sbjct: 3 FDGGVVVGTDSRTSSGSYISSRATDKITPVTNRMVVCRSGSAADTQAISDIVKYYIEVYS 62
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+T+ +A + N + KYR + LS L+A YD++ G QLY + G
Sbjct: 63 MMEEEDVTVGRSAQIFRNFLYKYR---------DSLSASVLVAGYDDVEGGQLYAIPLGG 113
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ GSG+ + Q LD+ ++ ++ E+ + +A+ A RD SGG +RL
Sbjct: 114 YVTRQRCAASGSGSTFVQGFLDSQWKSGMTAEKCKEIVLNAVALATIRDGSSGGVIRLAV 173
Query: 282 INGQGWQQVLSRDVKDI 298
I+ G Q++ S + +I
Sbjct: 174 IDKTGTQRMASCSILEI 190
>gi|225714818|gb|ACO13255.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 231
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C G+AAD ++ + +
Sbjct: 39 FDGGVVIGADSRTTTGAYIANRVTDKLTPIHDHIFCCRPGSAADTQAVADAVTYQLGFHS 98
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL M +YR L G ++A +D+ G Q+Y + G
Sbjct: 99 IELDEPPLVQTAANLFKQMCYRYR---------EELMAGIIVAGWDKRKGGQVYTVPMGG 149
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D++Y+P +++EE T A+ A RD SGG RL
Sbjct: 150 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALTLAMERDGSSGGVARLAA 209
Query: 282 INGQGWQQ 289
I G ++
Sbjct: 210 ITEDGVER 217
>gi|443731714|gb|ELU16739.1| hypothetical protein CAPTEDRAFT_41193, partial [Capitella teleta]
Length = 131
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T +VI ++ +L T+AG AADC YW +A++C+ YE + + +++ A+ LL N
Sbjct: 28 IASQTVKKVIEINPYLLGTMAGGAADCQYWERVVARQCRIYELRNKERISVAAASKLLAN 87
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVG 232
+V Y+ GLS GT++ +D+ GP LY +D+ G + F VG
Sbjct: 88 IVYNYK--------GMGLSMGTMICGWDK-KGPGLYYVDSDGTRMTNAMFSVG 131
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRATA D I SQ + K +
Sbjct: 2 GTTTLAFKFKHGVIVAVDSRATAGDWIASQTVKKVIE 38
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V + + AG AD L K YE + + + A LL ++ R
Sbjct: 41 KVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRF 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ L+ DE GP L ++D G LIE +G+GA+ A A+LDT Y
Sbjct: 101 MPFFAEV--------LVGGIDE-EGPHLIVMDPLGSLIEDNYAALGTGAKLAVAVLDTGY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
RPD++ EEA LA A+ A RD SGG + L ++ G ++
Sbjct: 152 RPDITVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKNGARE 194
>gi|379994355|gb|AFD22804.1| proteasome subunit beta type 6, partial [Collodictyon triciliatum]
Length = 182
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V + S ++ V+ +I +G+AAD + K + + ++ AA
Sbjct: 6 SSGSYVVNRASDKITSVADNIYVCRSGSAADTQVLTDYVRHYIKLHSLELGEEPEVKVAA 65
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
NL M Y NH L G ++A YD GP +Y + G + E GSG
Sbjct: 66 NLFRMMA--YHNKNH-------LMAGLIVAGYDARHGPSVYNISLGGAVCEQPLAAGGSG 116
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
+ Y LD++YRPD + EE +AI A RD SGG RL +N G + L
Sbjct: 117 STYIFGFLDSNYRPDFTREECEKFVATAISLAIHRDGSSGGVCRLLTVNKDGATRTL 173
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGM---TIRHAANL 176
+ H ++ + + T++G AD L +L + Y+ ++R + T+ + A+L
Sbjct: 27 IAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTLTILARDYKTEHRRPIPVKTLVNYASL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
L+ R HS + +D+ GPQLYMLD G E GSG+
Sbjct: 87 LLFYSRPVIYIVHS-----------IFGGFDD-EGPQLYMLDWLGSYSEERYISTGSGSP 134
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
YA +L+ YR D++ +EA LA +A+ A R D SG + + I G+++V S
Sbjct: 135 YAMGVLEVGYREDMTVDEAVKLAENAVKAAMRNDPGSGEGIDIVTITKDGFRRVFS 190
>gi|17225016|gb|AAL37206.1|AF321444_1 low molecular weight polypeptide LMP7 [Paralichthys olivaceus]
Length = 273
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 123 NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVR 182
N +VI ++ +L T++G+AADC YW LAKEC+ Y + +++ A +
Sbjct: 100 NDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAPSCC----- 154
Query: 183 KYRTGNHSSKIP-NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAI 241
H + + +GLS G+++ +D+ GP M G + + +G A
Sbjct: 155 -----QHDAGLQRHGLSMGSMICGWDK-EGPGCTMWMIMGRVCQPACSLPAAGTRTPMAW 208
Query: 242 LDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+ + EEAY L I HA RD +SGG V +Y + GW +V DV ++
Sbjct: 209 WQR-LQGRHAVEEAYELGRRGITHATHRDAYSGGVVNMYHMREDGWIKVCKDDVSEL 264
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTTL F++ G+I+A DSRA+A + S +NK +
Sbjct: 71 GTTTLAFKFKHGVIVAVDSRASAGRYLSSNDVNKVIE 107
>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 101 LHPVYTG----------GERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCV 147
+H +YTG G G S++ST V + S +V + I +G+AAD
Sbjct: 1 MHSLYTGTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRLHDRIFVCRSGSAADTQ 60
Query: 148 YWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKI-----PNGLSFGTL 202
+ L+ + K + HA +L ++ + K +T + ++ L+ G +
Sbjct: 61 F----LSSKVKYFLNA--------HANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLI 108
Query: 203 MAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSA 262
+A +D+ GPQ+Y + G +I+ GSG+ Y ++D YRPD+S EEA A
Sbjct: 109 VAGWDQTEGPQVYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKA 168
Query: 263 IYHACRRDIHSGGCVRLYKI 282
+ HA RD SGG +R+ +
Sbjct: 169 VAHAMARDGSSGGVIRVTTV 188
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E YE + M+++ A LL N +R +G P
Sbjct: 90 LTIAGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALATLLANFLR---SGAFFVVQP-- 144
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G + E GSG++YA +L+ Y DLS EEA
Sbjct: 145 -----ILGGVDE-EGPHVYSMDALGGMSEENYTVTGSGSQYALGVLEQHYEEDLSIEEAK 198
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+A AI A RD+ SG + + + +G +D+ +
Sbjct: 199 TVAAKAIQSAVERDLASGNGINVAVVTDEGVDITRHKDIAKV 240
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
TGTTT+G + EG++LATD RA+ ++ S+ + K Q
Sbjct: 46 TGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQ 83
>gi|355714032|gb|AES04868.1| proteasome subunit, beta type, 8 [Mustela putorius furo]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%)
Query: 211 GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
GP LY + G + G+ F GSG YA ++D+ YRPDLS EEAY L AI +A RD
Sbjct: 1 GPGLYYVTEDGTRLSGSMFSTGSGNSYAYGVMDSGYRPDLSPEEAYELGRKAIVYATHRD 60
Query: 271 IHSGGCV 277
+SGG V
Sbjct: 61 SYSGGVV 67
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V + + AG+ D + + L E K Y + M+++ A L N++ R
Sbjct: 40 KVFWIDDHLALAGAGSVGDILSLVRLLRAEAKLYRARVGKEMSVKALATLTSNVLHGNRF 99
Query: 187 GNHSSKIPNGLSFGT-LMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
+P FG L+A +DE P LY +D G + E GSG E+A +IL+ +
Sbjct: 100 ------MP---YFGWFLIAGHDE--KPGLYSIDMAGGVTEDKFTAAGSGMEFAFSILEEN 148
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
YR D+ E LA AI A RRD+ +GG V L + +G+++ ++K
Sbjct: 149 YREDMPLEGGVKLALRAIKAATRRDVFTGGGVTLVTVTREGYREWSDEEIK 199
>gi|263173494|gb|ACY69954.1| proteasome subunit beta type-6 [Cimex lectularius]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 72 VAETQQDHFLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQ----SSTVPHNTSFQ 127
V E D F +P + + +++G + ++ ++ G G S+ SS V + S +
Sbjct: 5 VMELPWDRFGAPAAVE--EPVMTGTT--IMACTFSDGVVIGADSRTSVGSSYVANRVSDK 60
Query: 128 VIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTG 187
+ V+ I C +G AAD ++ Y+ + + AA L + YR
Sbjct: 61 LTKVTDYIYCCRSGAAADTQAVADIVSYHLAFYKSETGEEPLVSTAAALFRELCYNYR-- 118
Query: 188 NHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYR 247
N L+ G ++A +D + G Q+YM+ G+ +E GSG+ Y D +YR
Sbjct: 119 -------NKLTAGIIVAGWDRVKGGQVYMVPLGGMCVEQKYAMGGSGSTYIYGFTDANYR 171
Query: 248 PDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ--VLSRDV 295
++ +E A AI A RRD SGG +R+ I G Q+ V +D+
Sbjct: 172 EGMNSKECKAFIKQAIALAIRRDGSSGGVIRMGVITKDGIQREVVAGKDI 221
>gi|182891064|gb|AAI65062.1| Psmb6 protein [Danio rerio]
Length = 223
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 31 FDGGVVMGADSRATTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADAVTYQLGFHS 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AA+L +M +YR L G ++A +D G Q+Y + G
Sbjct: 91 IELDEAPLVQTAASLFRDMCYRYR---------EELMAGIIVAGWDRRRGGQVYTVPVGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L GSG+ Y +D++YR +S+EE A+ A RD SGG VRL
Sbjct: 142 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVRLAV 201
Query: 282 INGQGWQQ 289
I+ QG ++
Sbjct: 202 ISEQGVER 209
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + MT + ANLL N++
Sbjct: 39 KILPITDKIAITTAGSVGDLQALARMLEAEARYYQFTWGKPMTAKAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N S P + ++ Y E P L LD G LI GSG+ +A AIL+ Y
Sbjct: 94 -NESKWFPYMVQI--IIGGYVE--EPTLASLDPLGGLIFDNYTATGSGSPFAIAILEDGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSG 274
+ D++ EEA LA A+ A +RD+++G
Sbjct: 149 KEDMTIEEARELAIRAVRTAGKRDVYTG 176
>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
Length = 241
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 96 DSCELLHPVYTGGERCGP---FSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHS 152
D+ L+ + GG G SQ S V ++ + ++ PVS + +G++AD +
Sbjct: 21 DATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLARSGSSADTQFVAGV 80
Query: 153 LAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
+ + + Y ++ T+R AA N+ +++K + LS G + A +D G
Sbjct: 81 IEAKLEAYRTEFGRYPTVRAAATATRNLC-------YANK--DQLSAGIICAGWDSREGG 131
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
++ + G L+E GSGA YA D + RP L +E + +A+ A RRD
Sbjct: 132 SVFSVPQGGSLLEQPFAVSGSGAVYALGYCDDNLRPGLGRDECVSHVRTALEMAVRRDGA 191
Query: 273 SGGCVRLYKINGQGWQQ 289
SGG +RL ++ G ++
Sbjct: 192 SGGVIRLCVVSADGVER 208
>gi|5823090|gb|AAD53036.1|AF115539_1 proteasome delta [Oncorhynchus mykiss]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S+++T + + + ++ P+ I C +G+AAD + + +
Sbjct: 31 YDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADVVTYQLGFHS 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL +YR L G ++A +D+ G Q+Y + G
Sbjct: 91 IELDEAPLVQTAANLFKASCYRYR---------EELMAGIIVAGWDKRRGGQVYTVPVGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D++Y+P++++++ L + A+ A RD SGG VRL
Sbjct: 142 MLVRQPVSVGGSGSTYIYGYMDSNYKPNMTKDQCLRLVSGALSLAMERDGSSGGVVRLAA 201
Query: 282 INGQG 286
I+ G
Sbjct: 202 ISETG 206
>gi|62204261|gb|AAH92699.1| Psmb6 protein [Danio rerio]
Length = 232
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 40 FDGGVVMGADSRATTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADAVTYQLGFHS 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AA+L +M +YR L G ++A +D G Q+Y + G
Sbjct: 100 IELDEAPLVQTAASLFRDMCYRYR---------EELMAGIIVAGWDRRRGGQVYTVPVGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L GSG+ Y +D++YR +S+EE A+ A RD SGG VRL
Sbjct: 151 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVRLAV 210
Query: 282 INGQGWQQ 289
I+ QG ++
Sbjct: 211 ISEQGVER 218
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y + MT + ANLL N++ + R
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNENRW 98
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ +I G DE P + LD G LI GSG +A A+L+ Y
Sbjct: 99 FPYLVQIIIG-------GYVDE---PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
R DL+ EEA LA A+ A RRD+++G V++ I G ++
Sbjct: 149 REDLTIEEAKELAIRAVRAAGRRDVYTGSKKVQVVTITKDGMKE 192
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L + + Y+ + MT R ANLL N++
Sbjct: 40 KILPITDRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANLLSNIL----- 94
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + L+ Y + P+L +D G L+ GSG+ +A AI++ Y
Sbjct: 95 -NENKWFPYMVQI--LIGGY--VDKPELASVDALGGLVFEKYTATGSGSPFAIAIIEDGY 149
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSG 274
R D+S EEA LA A+ A +RD+++G
Sbjct: 150 REDMSIEEAKELAVRAVRTAGKRDVYTG 177
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + MT R ANLL N++
Sbjct: 40 KIVPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMTTRAMANLLSNIL----- 94
Query: 187 GNHSSKIPNGLSFGTLMAAY-DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
N + P + ++ Y DE P L LD G L+ GSG+ +A A+L+
Sbjct: 95 -NENKWFPYLVQI--IIGGYVDE---PTLANLDAMGGLVFDDYTATGSGSPFAIAVLEDG 148
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSG 274
++ D+S EEA LA A+ A +RD+++G
Sbjct: 149 FKKDMSVEEAKELAVRAVRTAGKRDVYTG 177
>gi|224144619|ref|XP_002187722.1| PREDICTED: proteasome subunit beta type-6 [Taeniopygia guttata]
Length = 233
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ PV I C +G+AAD ++A + +
Sbjct: 38 FDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAVADAVAYQLAFHS 97
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ +R AA L +YR LS G ++A +D G Q+Y++ G
Sbjct: 98 VELEEPPRVRTAARLFQQSCYRYR---------EELSAGIIVAGWDPRRGGQVYVVPMGG 148
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
LL+ GSG+ Y LD ++P +S + A+ A RD SGG +RL
Sbjct: 149 LLLRQPFAVGGSGSSYIYGFLDATFQPGMSRSQCQEFVARALALAMVRDGSSGGVIRLAA 208
Query: 282 INGQGWQQVL 291
I +G ++ +
Sbjct: 209 ITEEGVERTV 218
>gi|399217019|emb|CCF73706.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 64/295 (21%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHPVYTGGERCGQ 63
TGTT L Y G+ILA DSR ++ + ++ K + LL +Y RCG
Sbjct: 27 TGTTILAMHYAGGVILAADSRTSSGQFVSNRVARKITK--------LLPNIYVA--RCGS 76
Query: 64 SYSQRSHCVAETQQDHFLSPPLSQSSQHIISGDSCELLHP----VYTGGERCGP-FSQSS 118
+ A+TQ LS L Q + P VY G P S+S+
Sbjct: 77 A--------ADTQN---LSLILKYYGQVLRQQLRIFNYEPHGSNVYVRGMDVDPSHSESN 125
Query: 119 T---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN 175
T P+N P+S+ + + +EC G+ G T+ A+
Sbjct: 126 TGNYQPNN------PIST-------------FSYSYKHDQEC-GF-----MGPTVNCIAS 160
Query: 176 LLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSG 234
+ N+V +Y+ + L G + A D P +Y++ G I+ F GSG
Sbjct: 161 IAQNLVHEYK---------DRLRCGLIFAGVDFTGIPDVYIVMPGGAKIKVDSFISAGSG 211
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+ Y QA L ++Y+ D S EE+ LA AI +A + D SGG VRL I+ Q Q+
Sbjct: 212 SGYIQAFLQSNYKKDQSAEESVRLAKQAILYATKNDSMSGGLVRLVNIDTQSVQE 266
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGM---TIRHAANL 176
V H +V+ V+ +I T AG+ AD + +++ L K Y TGM TI+ A
Sbjct: 39 VAHKYVRKVLYVAPNIGITTAGSVAD-LQFIYDLLKNI--YHYNLITGMRPITIKALATY 95
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
L NM+ + S +P + L+ DE P+LY LD G + E GSG+
Sbjct: 96 LANML------SFSKYLPYIVQI--LIGGVDE--QPRLYNLDYVGDITEEDYTATGSGSV 145
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
A +++ +YRPD++ +EA LA AI+ + +RD ++G V + KI G ++ K
Sbjct: 146 EAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDPYTGTGVIVSKITKNGHEE------K 199
Query: 297 DIYNDRK 303
+ Y RK
Sbjct: 200 EYYPQRK 206
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN---L 176
+ H ++ + + T++G AD L+ L+ + + Y ++ + I+ N L
Sbjct: 27 IAHKRGEKIWKIDEHVAATMSGGVADLQGLLNILSIQAREYRSEHGRPIPIKTLVNYASL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
++ R + HS ++ YD+ GPQLYMLD G GSG+
Sbjct: 87 VLFYSRPFIYLVHS-----------IIGGYDD-EGPQLYMLDWLGSYSSERYIATGSGSP 134
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLS 292
YA +L+ +YR D+S +EA +A +A+ A R D SG + + I +G+++VL+
Sbjct: 135 YAMGVLEVNYRDDISIDEAIKVAENAVKAAMRNDPGSGEGIDIVVITKEGFRRVLT 190
>gi|348538008|ref|XP_003456484.1| PREDICTED: proteasome subunit beta type-6-like [Oreochromis
niloticus]
Length = 233
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S+++T + + + ++ + + I C +G+AAD +A + +
Sbjct: 41 YDGGVVIGADSRTTTGAYIANRVTDKLTRIHNKIYCCRSGSAADTQAIAEIVAYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL +YR L+ G L+A +D+ G Q+Y + G
Sbjct: 101 IELDEPPLVETAANLFRASCYRYR---------EELTAGILVAGWDKRKGGQVYSVPIGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D +Y+P +++E+ L +A+ A RD SGG VRL
Sbjct: 152 MLVRQPVSVGGSGSTYIYGFMDANYKPGMNKEQCMELTAAALSLAMERDGSSGGVVRLAS 211
Query: 282 INGQGWQQ 289
I+ +G ++
Sbjct: 212 ISEEGVER 219
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ + ++ ++ I T AG D + + EC YE + M++ A+ LL N
Sbjct: 37 IASKRAKKIYKITPRIGMTTAGGVGDAQQLVRIIQVECSLYEMRRGRTMSVGAASTLLSN 96
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG-LLIEGTKFCVGSGAEYA 238
+ N + P + LM +DE GP +Y +D G E GSG+ +A
Sbjct: 97 YL------NQNRYYPYYVQL--LMGGFDE-GGPSVYSVDAMGGATREEEIVATGSGSPFA 147
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+L+ YRPD++EEEA LA A+ A RRD SG + + I +++
Sbjct: 148 YGVLEDQYRPDMTEEEAKDLAIRAVRSAMRRDAGSGENIMVVVIMKDKYEE 198
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
+ GTTT+G + +G++LAT+ RAT +LI S++ K
Sbjct: 8 IMKGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKI 45
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V V + AG AD L K YE + + ++ A LL ++ R
Sbjct: 41 KVFVVDDKLAIASAGIIADMQALAKILKLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRF 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ L+ DE GP L ++D G LIE +G+GA+ A A+LD +Y
Sbjct: 101 MPFFAEV--------LVGGVDE-EGPHLIVMDPLGSLIEDNYAALGTGAKLAAAVLDGNY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
R D+S EEA LA A+ A RD SGG + L ++ +G ++
Sbjct: 152 RNDMSIEEAKKLAVQALKAAIERDPVSGGGIDLVVVDEKGARE 194
>gi|223647028|gb|ACN10272.1| Proteasome subunit beta type-6 precursor [Salmo salar]
gi|223672893|gb|ACN12628.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 202
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 113 PFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRH 172
P S V T ++I V I C +AG+ AD + + + + + ++
Sbjct: 21 PLHHRSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKA 80
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVG 232
AA++L + + L G + A +D GPQ+Y + G+L+ G
Sbjct: 81 AASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGG 131
Query: 233 SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
SG+ Y D Y+PD+S+EE AT+A+ A RD SGG L I +G + V+
Sbjct: 132 SGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVEHVV 190
>gi|45361029|ref|NP_989151.1| proteasome beta 6 subunit [Xenopus (Silurana) tropicalis]
gi|38494336|gb|AAH61603.1| proteasome (prosome, macropain) subunit, beta type, 6 [Xenopus
(Silurana) tropicalis]
gi|89266723|emb|CAJ83898.1| proteasome (prosome macropain) subunit beta type 6 [Xenopus
(Silurana) tropicalis]
Length = 233
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ PV I C +G+AAD ++ + G+
Sbjct: 41 FDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAIADAVTYQL-GFH 99
Query: 162 CKYRTGMTIRH-AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
G+ + H AANL M +YR L G ++A +D+ G Q+Y +
Sbjct: 100 SIELDGLPLVHTAANLFKEMCYRYR---------EDLMAGIIVAGWDKRKGGQVYTVPMG 150
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G+++ GSG+ Y +D+ YR +++EE +A+ A RD SGG +RL
Sbjct: 151 GMMVHQPFSIGGSGSSYIYGFVDSTYRSGMTKEECLKFTANALALAMERDGSSGGVIRLA 210
Query: 281 KINGQGWQQ 289
I G ++
Sbjct: 211 AITEGGVER 219
>gi|242014499|ref|XP_002427927.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
gi|212512411|gb|EEB15189.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
Length = 226
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 84 PLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLA 140
PL Q +G + ++ Y GG G S+++T V + + ++ ++ I C +
Sbjct: 15 PLPDWMQEETTGTT--IMAVEYDGGVVIGGDSRTTTGGYVANRFTDKLTKITDRIYCCRS 72
Query: 141 GNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFG 200
G+AAD + + + + AAN+ + YR + L+ G
Sbjct: 73 GSAADTQAIADIVEYHMNLQNIELGSESLVSTAANVFKEICYSYR---------DSLTAG 123
Query: 201 TLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALAT 260
++A YD + G Q+Y + G+L GSG+ Y +D+ Y+P++S+EE+ T
Sbjct: 124 IIVAGYDSLYGGQVYCIPIGGMLQRQNVATGGSGSTYVYGYVDSHYKPNMSKEESVNFVT 183
Query: 261 SAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR--DVKDIY 299
+ + A RD SGG +RL I+ G ++ L + D+ Y
Sbjct: 184 NTVALAMMRDSSSGGVIRLGIIDENGIERRLIKGEDIPKFY 224
>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 212
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 14 ILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 73
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 74 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 124
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE AT+A+ A RD SGG
Sbjct: 125 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGG 184
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 185 VAHLVVITEEGVEHVV 200
>gi|190359943|sp|A7KII6.1|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
AltName: Full=Low molecular mass protein 2-delta-B;
Flags: Precursor
gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
Length = 217
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 19 ILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE AT+A+ A RD SGG
Sbjct: 130 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 190 VAHLVVITEEGVEHVV 205
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
V+ + AG D + + L E K YE ++ + R A LL ++ Y+
Sbjct: 44 VTDHVGVGFAGLMGDVGFLVKVLRLEAKNYELQHGREIRARSMAKLLSLILYNYKLAPML 103
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+++ G +D+ GP LY+LD G LIE VGSGA+ A ++ Y P +
Sbjct: 104 TEVVVG--------GFDD-EGPSLYILDPVGSLIEEKYVAVGSGAQLALGYIEPRYSPSI 154
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
+ EA LA +AI RD+ SG + L I G++
Sbjct: 155 TLAEAEELAVNAIRTVVERDVLSGDGIDLATITRSGYR 192
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ P+ I T+AG+ D + ++ E K Y+ + M+ L+ N++
Sbjct: 43 KLYPIDEYIAMTIAGSVGDAQSLVRIISAETKIYKMRTGNNMSPLACTTLMSNVLH---- 98
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
GN + N L G DE PQLY LD G + E T F GSG+ A +L+ +
Sbjct: 99 GNRHFPLMNQLIVGGYDVCNDE---PQLYSLDAVGGINEETTFTSTGSGSPTAYGVLEAE 155
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
Y L A LA AI A +RD +SG + L KI+ G + ++++ I
Sbjct: 156 YVNKLKTSAALKLAVKAISSAMKRDAYSGNGISLAKIDKNGVKIYTEKEIETI 208
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
++ GTTT+G +G++LATD RAT +LI ++ K
Sbjct: 7 YMKGTTTVGIACADGVVLATDKRATMGNLIADKEAKKL 44
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E Y+ M+++ A LL N++ N S P F
Sbjct: 56 AGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANIL------NGSKYFPYLGWF 109
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YDE P+L+ +D G + E GSG E+A +ILD++YR ++S + LA
Sbjct: 110 --LVGGYDE--KPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLA 165
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
AI A +RD+ +G + + I G+++
Sbjct: 166 VKAINVAIKRDVFTGDGLLVVTITKDGYKE 195
>gi|256077218|ref|XP_002574904.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
gi|353229033|emb|CCD75204.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
Length = 225
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S++S+ V + + ++ ++ SI C +G+AAD + + +
Sbjct: 33 YDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCCRSGSAADTQAVADMVRYQLDFHR 92
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ T+ AA + YR + L G ++A +DE LG Q+Y + G
Sbjct: 93 LEMNREPTVLEAAVSCKHFCYNYR---------DDLVAGIIVAGWDEELGGQIYSIPLGG 143
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+LI GSG+ Y +D +R ++ EE + + A RD SGGCVRL
Sbjct: 144 MLIRQPIVIGGSGSTYTYGYVDHGFRKGMTREECVSFVLKGVALAINRDGSSGGCVRLAI 203
Query: 282 INGQGWQQVLSR 293
I+ G +++L++
Sbjct: 204 ISKDGVERILTK 215
>gi|209732878|gb|ACI67308.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD + + +
Sbjct: 40 FDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADIVTYQLGFHS 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL +YR L G ++A +D+ G Q+Y + G
Sbjct: 100 IELDEPPLVQTAANLFKQTCYRYR---------EELMAGIIVAGWDKRRGGQVYTVPMGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D++Y+P +++EE T A+ A RD SGG RL
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERDGSSGGVARLAA 210
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 211 ITEEGLER 218
>gi|313230140|emb|CBY07844.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 69 SHCVAETQQDHFLSP---------PLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST 119
S E FLSP P S Q I + ++ + GG G S++S
Sbjct: 2 SGVFVEDPSRSFLSPYPTPLHQGTPTPSSIQKIPADLGTTIMAVEFDGGVVIGADSRTSA 61
Query: 120 ---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKY-RTGMTIRHAAN 175
+ + + ++ V I C +G+AAD + ++ +G+ ++ AA
Sbjct: 62 GAYIVNRVTDKLTKVHERIYCCRSGSAADTQFIATAVKTRLEGHAIMIDEENPSVETAAT 121
Query: 176 LLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGA 235
L +YR + S G L+A +D + G Q++ + G+ I GSG+
Sbjct: 122 LFKEYCYEYR---------DQFSAGILVAGWDPVEGGQVFSIPLGGMKIRQKVAIGGSGS 172
Query: 236 EYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ--VLSR 293
+ ++D ++ +S+EE A + HA RD SGG +RL I G ++ VL
Sbjct: 173 TWIYGLVDNQFKEGMSKEETKAFVKMCVAHAMDRDASSGGVIRLATITKDGVERDVVLGN 232
Query: 294 DVKDIYN 300
++ Y+
Sbjct: 233 ELPKFYS 239
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L + + Y+ + MT R ANLL N++
Sbjct: 40 KILPITDRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANLLSNIL----- 94
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y + P+L +D G L+ GSG+ +A AI++ Y
Sbjct: 95 -NENKWFPYMVQI--IIGGY--VDKPELASVDALGGLVFEKYTATGSGSPFAIAIIEDGY 149
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSG 274
R D+S EEA LA A+ A +RD+++G
Sbjct: 150 REDMSIEEAKELAVRAVKTAGKRDVYTG 177
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSF 199
AG+ D + + L E Y+ M+++ A LL N++ N S P F
Sbjct: 53 AGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANIL------NGSKYFPYLGWF 106
Query: 200 GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALA 259
L+ YDE P+L+ +D G + E GSG E+A +ILD++YR ++S + LA
Sbjct: 107 --LVGGYDE--KPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLA 162
Query: 260 TSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
AI A +RD+ +G + + I G+++
Sbjct: 163 VKAINVAIKRDVFTGDGLLVVTITKDGYKE 192
>gi|226468552|emb|CAX69953.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
gi|226484696|emb|CAX74257.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
Length = 218
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 86 SQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGN 142
S++ Q I +G + L Y GG G S++S+ V + + ++ ++ SI C +G+
Sbjct: 9 SENVQGISTGTT--LFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCCRSGS 66
Query: 143 AADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTL 202
AAD + + + + T+ AA + YR + L G +
Sbjct: 67 AADTQTVADMVRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYR---------DDLVAGII 117
Query: 203 MAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSA 262
+A +DE G Q+Y + G+LI GSG+ Y +D D+R ++ EE
Sbjct: 118 VAGWDEQSGGQIYSIPLGGMLIRQPIVIGGSGSTYTYGYVDHDFRKGMTREECINFVLKG 177
Query: 263 IYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+ A RD SGGC+RL I+ G +++L++
Sbjct: 178 VALAINRDGSSGGCIRLAIISKDGVERILTK 208
>gi|225716640|gb|ACO14166.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 262
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
Y GG G S+++T + + + ++ P+ I +G+AAD +A + +
Sbjct: 39 YEGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFRCRSGSAADTQAIADIVAYQLGFHS 98
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL +YR L G ++A +D+ G Q+Y + G
Sbjct: 99 IELDEAPLVQAAANLFKASCYRYR---------EELMAGIIVAGWDKRRGGQVYTVPVGG 149
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D++Y+P++++E+ L + A+ A RD SGG +RL
Sbjct: 150 MLVRQPVSVGGSGSTYIYGFMDSNYKPNMTKEQCLHLVSGALSLAMERDGSSGGVIRLAA 209
Query: 282 INGQGWQQ 289
I+ G ++
Sbjct: 210 ISESGVER 217
>gi|391339580|ref|XP_003744126.1| PREDICTED: proteasome subunit beta type-6-like [Metaseiulus
occidentalis]
Length = 212
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S S V + + ++ ++ SI C +G+AAD ++A YE + T+ AA
Sbjct: 33 SSGSYVANRVADKLTKITDSIYCCRSGSAADTQCIADAVAYHLAFYEMQTGKPATVEAAA 92
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK-FCVGS 233
N+ N+ KYR + + G + A YD+ G +Y + G L+E + GS
Sbjct: 93 NVFRNICYKYR---------DDMVAGIICAGYDDERGGGIYSIPPGGCLVEEKRVISAGS 143
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
G+ + LD ++ ++S+EE L A+ A +D SGG R+ I G ++ L
Sbjct: 144 GSVFISGFLDALFKNNMSKEECVDLCLKAVSLAIHKDTSSGGVCRMAVITKDGVERKL 201
>gi|346472801|gb|AEO36245.1| hypothetical protein [Amblyomma maculatum]
Length = 242
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 77 QDHFLSPPLSQSSQHIISGD---SCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIP 130
+HF P LS ++ + ++ + GG G +++ST V + S ++
Sbjct: 19 MNHFGPPSLSDVIPDWMTAEHSTGTSIIAVEFDGGVVIGADTRTSTGAYVANRVSDKLTR 78
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHS 190
V+ I C +G+A+D + YE + AAN+ + +R
Sbjct: 79 VTDRIYCCRSGSASDTQAIADIVTYHVGLYEMVMGEPAKVETAANIFRELCYNHR----- 133
Query: 191 SKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDL 250
+ L G + A +D G Q+YM+ G+L+ GSG+ Y +D +Y+P +
Sbjct: 134 ----DQLVAGIICAGWDRHNGGQVYMVPLGGMLMRQPVAMGGSGSTYLYGYVDANYKPGM 189
Query: 251 SEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ-QVLSRD 294
++EE + T AI A RD SGG +RL I G + +VL+ D
Sbjct: 190 TKEECLSFVTKAISLAIVRDGSSGGVIRLGVITKDGVERKVLTGD 234
>gi|209733028|gb|ACI67383.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD + + +
Sbjct: 40 FDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADIVTYQLGFHS 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL +YR L G ++A +D+ G Q+Y + G
Sbjct: 100 IELDEPPLVQTAANLFKQTCYRYR---------EELMAGIIVAGWDKRRGGQVYTVPMGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D++Y+P +++EE T A+ A RD SGG RL
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERDGSSGGVARLAA 210
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 211 ITEEGLER 218
>gi|156387836|ref|XP_001634408.1| predicted protein [Nematostella vectensis]
gi|156221491|gb|EDO42345.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T V + + ++ PV+ I C +G+AAD + +
Sbjct: 5 FNGGVVIGADSRTTTGSYVANRVTDKLTPVTERIFCCRSGSAADTQAIADIVKYHLNFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + ++ AANL M YR + LS G + A +D++ G Q+Y + G
Sbjct: 65 IEMEEPVLVKTAANLFREMCYGYR---------DQLSAGIICAGWDKLNGGQVYSIPLGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ I GSG+ Y D Y+ +S+EE + +A+ A RD SGG +R+
Sbjct: 116 MCIRQPFTIGGSGSTYIYGHCDATYKSGMSKEECFNFVKTAVALAMSRDGSSGGIIRMAG 175
Query: 282 INGQGWQQ--VLSRDVKDIY 299
I+ G ++ +L ++ Y
Sbjct: 176 IDETGVERRVILGNELPTFY 195
>gi|426250991|ref|XP_004019215.1| PREDICTED: proteasome subunit beta type-9, partial [Ovis aries]
Length = 205
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+ S V + ++ P+ I C L+G+AAD A + + +
Sbjct: 14 FDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHG 73
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN++ N+ KYR LS ++A +D+ G Q+Y +G
Sbjct: 74 MELEEPPLVLAAANVVRNITYKYR---------EDLSAHLMVAGWDQREGGQVYG-TMSG 123
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+LI GSG+ Y +D Y+P +S EE T+AI A +RD SGG + L
Sbjct: 124 MLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRCFTTNAIALAMKRDGSSGGVIYLVT 183
Query: 282 INGQGW--QQVLSRDVKDIYND 301
I G G Q +L ++ Y++
Sbjct: 184 ITGAGVDHQVILGNELPKFYDE 205
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI--RH 172
S + + + ++ + I T+AG+ D + +L E + Y K RTG I R
Sbjct: 27 SMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRALIAEARLY--KMRTGKNISPRA 84
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-V 231
A LL N++ HSS++ L+ ++ YD GP+L+ LD G + E F
Sbjct: 85 CATLLSNIL-------HSSRMFPFLT-QIIIGGYDLTDGPKLFSLDPLGGMNEEKTFTST 136
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
GSG+ A +L+ +Y D+S EE LA A+ A RD +SG V + I +G +
Sbjct: 137 GSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNGVSVAVITKEGVK 193
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V H + ++ + I T+AG +D + + E + + + + AA L N
Sbjct: 35 VAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSN 94
Query: 180 MVRKYRTGNHSSKIPNGLSF--GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
++ HSS+ G F TL+ D+ GP LY LD TG +I+ GSG+
Sbjct: 95 IL-------HSSR---GYPFYVQTLLGGVDD-KGPALYSLDPTGGVIKDLVISTGSGSPV 143
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
A +L+ Y DL EE +A AI A RD +SG + + I +G++++ +V
Sbjct: 144 AYGVLEDRYSQDLYVEEGIDVAIRAIKSAMERDTYSGNSILVATITEEGFKRLSEEEV 201
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN---L 176
+ H ++ + + T++G AD L L + Y+ ++R + IR N L
Sbjct: 27 IAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
++ R Y HS ++ DE G +YM+D G + + GSG+
Sbjct: 87 ILFYSRPYVYVVHS-----------IIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSP 135
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKING-QGWQQVLS 292
YA+ +L+ YR DL+ EEA LA +AI A R D SG + + I +G++++ +
Sbjct: 136 YAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITKREGFKRIFT 192
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y+ + M+ R ANLL N++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMLARILEVEARYYQFTWGRPMSTRAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y E P + LD G LI GSG+ +A A+L+ Y
Sbjct: 94 -NENKWFPYLVQI--VIGGYVE--EPVIANLDPLGGLIFDDYTATGSGSPFAIAVLEDGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
R D+ EEA LA A+ A +RD+++G V++ I +G ++
Sbjct: 149 RKDMGIEEAKELAVKAVKVAGKRDVYTGSRKVQVVTITKEGMRE 192
>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
Length = 212
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 14 ILAVTFNGGVIIGSDSRASIGGNYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 73
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 74 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 124
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S EE AT+A+ A RD SGG
Sbjct: 125 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGG 184
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 185 VAHLVVITEEGVEHVV 200
>gi|18859271|ref|NP_571227.1| proteasome subunit beta type-6 [Danio rerio]
gi|2654062|gb|AAB87681.1| proteasome subunit Y [Danio rerio]
Length = 223
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 31 FDGGVVMGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADAVTYQLGFHS 90
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AA+L +M +YR L G ++A +D G Q+Y + G
Sbjct: 91 IELDEAPLVQTAASLFRDMCYRYR---------EELMAGIIVAGWDRRRGGQVYTVPVGG 141
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L GSG+ Y +D++YR +S+EE A+ RD SGG VRL
Sbjct: 142 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLPMERDGSSGGVVRLAV 201
Query: 282 INGQGWQQ 289
I+ QG ++
Sbjct: 202 ISEQGVER 209
>gi|224473815|gb|ACN49156.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + AA++L + + + L G + A +D+ GPQ+Y
Sbjct: 79 QLSFHSVQMENPPLVIAAASILKELCYNNK---------DELQAGFITAGWDKKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+LI GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
V L I G + ++
Sbjct: 190 VVNLVVITEAGAEHIV 205
>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 19 ILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE AT+A+ A RD SGG
Sbjct: 130 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + ++
Sbjct: 190 VAHLVVITEEGVEHIV 205
>gi|118346415|ref|XP_976941.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288453|gb|EAR86441.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 227
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD----CVYWLHS 152
++ VY GG G S++++ + +V + I C +G+AAD C Y +
Sbjct: 28 IMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYVRYY 87
Query: 153 LAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
L + E + R T++ AA L N++ +Y+ + LS ++A D+ GP
Sbjct: 88 L--DVHSMELQRRP--TVKTAAKLFSNLIYQYQ---------DNLSAAVIVAGIDDNEGP 134
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+Y +G I+ GSG+ + + +D ++RP++ E A L +A+ HA RD
Sbjct: 135 SIYACQPSGSCIKQQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGS 194
Query: 273 SGGCVRLYKI 282
SGG +RL I
Sbjct: 195 SGGIIRLVNI 204
>gi|145499554|ref|XP_001435762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402897|emb|CAK68365.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
++ +Y GG G S++S+ V + ++ + I C +G AAD + K
Sbjct: 20 IMAVIYDGGLLIGADSRTSSGQFVADRCADKIDYIHDRIFCLRSGAAADT----QIITKH 75
Query: 157 CKGYECKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
+ Y + + + AANL N + +Y+ + +S ++A +D GP
Sbjct: 76 VRYYVDAHAQELGRLPAVATAANLFRNFLYEYK---------DSMSASIIVAGWDPYKGP 126
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
Q++ L G +IE GSG+ + D++Y+ +++ +EA A + A+ HA RD
Sbjct: 127 QIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYKENMTHQEARAFVSHAVAHAMFRDGS 186
Query: 273 SGGCVRLYKINGQGWQQVLSRDVKDI 298
SGG +RL + ++ D KD+
Sbjct: 187 SGGIIRLLNVTKDKIEREFI-DYKDV 211
>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
Length = 217
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 19 ILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE AT+A+ A RD SGG
Sbjct: 130 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + ++
Sbjct: 190 VAHLVVITEEGVEHIV 205
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN---L 176
+ H ++ + + T++G AD L L + Y+ ++R + IR N L
Sbjct: 27 IAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
++ R Y HS ++ DE G +YM+D G + + GSG+
Sbjct: 87 ILFYSRPYVYVVHS-----------IIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSP 135
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQ-GWQQVLS 292
YA+ +L+ YR DL+ EEA LA +AI A R D SG + + I + G++++ +
Sbjct: 136 YAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITKRDGFKRIFT 192
>gi|154333595|ref|XP_001563054.1| putative proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060064|emb|CAM37377.1| putative proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 283
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L Y GG S++S+ V + S ++ ++ I C +G+AAD ++
Sbjct: 57 ILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTKKIYCCRSGSAADTQALAERVSNY 116
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
Y+ T + + AANL M R +S G ++A YD I G +Y
Sbjct: 117 LGSYQTDVGTEVNVATAANLFHKMCYMNRWN---------ISAGIIVAGYDPINGGSVYS 167
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+ + G ++ GSG+ + + D +Y+PD+S+ E A A+ HA RD SGG
Sbjct: 168 IPSGGSCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRAVAHAFSRDGSSGGL 227
Query: 277 VRLYKING 284
+R ++
Sbjct: 228 IRTITLDA 235
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y+ + M+ + ANLL N++
Sbjct: 40 KIIPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGKPMSTKAMANLLSNIL----- 94
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y E P L LD G LI GSG+ +A A+L+ Y
Sbjct: 95 -NGNKWFPYLVQI--ILGGYVE--EPTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGY 149
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQG 286
+ D+S EEA LA A+ A +RD+++G +++ I +G
Sbjct: 150 KKDMSIEEAKELAVRAVRTAGKRDVYTGSRKIQIVAITKEG 190
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 136 LCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPN 195
L AG D + E K YE +++ AA LL ++ +Y+ S+I
Sbjct: 46 LMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEI-- 103
Query: 196 GLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEA 255
L DE GPQLY+LD G LIE VGSGA A +L+++Y P+++ + A
Sbjct: 104 ------LFGGVDE-KGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIA 156
Query: 256 YALATSAIYHACRRDIHSGGCVRLYKINGQG 286
L T AI + RDI SG + L ++ +G
Sbjct: 157 AQLITKAIKASIERDITSGDGIDLAIMDKKG 187
>gi|224473798|gb|ACN49142.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVYDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + AA++L + + + L G + A +D+ GPQ+Y
Sbjct: 79 QLSFHSVQMENPPLVIAAASILKELCYNNK---------DELQAGFITAGWDKKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+LI GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
V L I G + ++
Sbjct: 190 VVNLVVITEAGAEHIV 205
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSK-IPNGLS 198
AG+ D + + L E K Y K M+++ A L N++ H S+ +P
Sbjct: 53 AGSVGDILSLVRLLRAEAKLYRAKVGKEMSVKALATLTSNVL-------HGSRFMPY--- 102
Query: 199 FGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYAL 258
FG + A P LY +D G + E GSG E+A +IL+ +++ +++ EE L
Sbjct: 103 FGWFLIA-GHTGEPGLYSVDMAGGVTEDRFTAAGSGMEFAFSILEAEFKENMTLEEGVKL 161
Query: 259 ATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
A AI A RRD+ +GG V L + +G+++ ++K +
Sbjct: 162 ALRAIKAATRRDVFTGGGVTLVTVTDEGYKEWSEEEIKGL 201
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLR---SGGFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ +++ LS EEA
Sbjct: 147 -----ILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFKDGLSIEEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 QVATKAIRSAVERDLASGNGINIAVVTEDG 230
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + EG++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQK---------VEEIHP 88
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL-VNMVRKYR 185
+V V+ + AG AD L K YE + + ++ A LL V M +
Sbjct: 41 KVFIVNDRLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRF 100
Query: 186 TGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
+ + G+ DE GP L ++D G LIE +G+GA+ A AI+D
Sbjct: 101 MPFFAEVLVGGID--------DE--GPHLIVMDPLGSLIEDNYAALGTGAKLAIAIIDAS 150
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
Y+PD+S ++A LA A+ A RD SGG + L I+ G ++
Sbjct: 151 YKPDMSLQDAKKLAVQALKAALERDPVSGGGIDLVVIDKNGARE 194
>gi|10803372|emb|CAC13119.1| low molecular mass polypeptide subunit PSMB9-L [Takifugu rubripes]
Length = 217
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCCMAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + T + AA++L + + + L G + A +D GPQ+Y
Sbjct: 79 HLSFHSVQMETPPLVISAASVLKELCYQNK---------EELQAGFITAGWDSRKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+L+ GSG+ Y +D Y+P++S EE AT+A+ A RD SGG
Sbjct: 130 VVALGGMLVRQPVTIGGSGSSYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I G + ++
Sbjct: 190 VANLVVITETGVEHLV 205
>gi|410931044|ref|XP_003978906.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Takifugu rubripes]
Length = 217
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCCMAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + T + AA++L + + + L G + A +D GPQ+Y
Sbjct: 79 HLSFHSVQMETPPLVISAASVLKELCYQNK---------EELQAGFITAGWDSRKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+L+ GSG+ Y +D Y+P++S EE AT+A+ A RD SGG
Sbjct: 130 VVALGGMLVRQPVTIGGSGSTYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I G + ++
Sbjct: 190 VANLVVITETGVEHLV 205
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMV--RKY 184
++ V + AG D + + +L E K Y K M+ + A L N++ RKY
Sbjct: 42 KIFQVDDHLALAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALATLTSNILSGRKY 101
Query: 185 RTGNHSSKIPNGLSFG-TLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
+P FG L+ YDE P LY +D G + E GSG E+A +ILD
Sbjct: 102 --------LP---YFGWFLIGGYDE--KPSLYSIDMAGGITEDKYVSAGSGMEFAYSILD 148
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+Y ++ LA AI A +RD+ +G + + I+ +G++++ +V+ +
Sbjct: 149 NEYSEKITLNNGVKLAIKAINAAIKRDVFTGDGIMVVTIDREGYRELSKEEVEKL 203
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T+ ++ + + T AG+ D + ++ E K Y+ + + +TI+ LL N
Sbjct: 35 IASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMISVESKLYKMRRQESITIKGLTTLLSN 94
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTK-FCVGSGAEYA 238
++ R P L L+ D+ GP ++ LD G IE TK GSG+ A
Sbjct: 95 ILGGQRY------FP--LMVQLLVGGVDKN-GPAIFSLDAMGGNIEETKAVATGSGSPMA 145
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+L+ Y ++ +E LA A+Y+A +RD SG + + KI G++++ + +V I
Sbjct: 146 YGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASGNGIDVVKITADGYKRIETGEVDKI 205
Query: 299 YNDRK 303
+ K
Sbjct: 206 LENLK 210
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + + H + ++ + I T+AG+ +D + ++ E Y + M++ AA
Sbjct: 30 SMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYISAEVALYRLRNGAPMSVEAAA 89
Query: 175 NLLVNMVRKYRTGNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGS 233
N+ N++ H+S+ P + TL+ DE GP L+ LD +G +I+ GS
Sbjct: 90 NMTSNIL-------HASRFYPYYVQ--TLLGGVDE-KGPALFSLDPSGGVIKDLMISTGS 139
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
G+ A +L+ Y ++ EE ++ AI A RD +SG +++ I + ++L
Sbjct: 140 GSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYSGNGIKVATITKEEGFKILPD 199
Query: 294 D 294
D
Sbjct: 200 D 200
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ ++ + T AG D + ++ E K YE + T++ A LL N++ R
Sbjct: 45 KIYRIADRVAMTTAGAVGDAQFLARLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRW 104
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV-GSGAEYAQAILDTD 245
+ F L+ + GP +Y +D G IE GSG+ A +L+
Sbjct: 105 FPY---------FVQLLVGGVDKRGPSIYSIDLLGGAIEEIDIVATGSGSPTAYGVLEDR 155
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
Y P+++ ++ LA AIY A RRD SG + + KI G+ ++ +V I + + A
Sbjct: 156 YTPEITVDDGVELAVRAIYSAMRRDSASGDGIDVVKITKDGYFELSKEEVDKILSSLRRA 215
>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
Length = 214
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 105 YTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
Y GG G S++S V ++I V I C +AG+ AD + + +
Sbjct: 21 YNGGVIIGSDSRASIGGSYVSSKVINKLIQVRDRIFCCIAGSLADAQHVTRVAKFQLSFH 80
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
+ + ++ AA +L + R L G + A +D+ GPQ+Y +
Sbjct: 81 SIQMGSPPLVKAAATVLKELCYSNR---------EDLQAGFITAGWDKKKGPQMYTVSMG 131
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G+LI GSG+ Y +D Y+PD+S EE +A+ A RD SGG L
Sbjct: 132 GMLISQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALAIGRDNVSGGIAHLV 191
Query: 281 KINGQGWQQVL 291
I G + V+
Sbjct: 192 VITEGGVEHVV 202
>gi|295901495|dbj|BAJ07259.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|295901526|dbj|BAJ07280.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + + AA++L + + L G + A +D+ GPQ+Y
Sbjct: 79 QLSFHSIQMESPPLVISAASVLKQLCYNNK---------EELQAGFITAGWDKKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+LI GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + ++
Sbjct: 190 VANLVVITEEGVEHIV 205
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V H + ++I ++ + T AG AD LA YE + M+I AA L
Sbjct: 41 VAHKRTKKIIKITDYMAMTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQYLSI 100
Query: 180 MVRKYRTGNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYA 238
++ HS+K P + L+ YD P+LY +D G + E GSG+ A
Sbjct: 101 IL-------HSAKFYPYIVQL--LLGGYDT--QPRLYNIDWFGSVTEEKYVATGSGSPTA 149
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+++ Y P+LS EEA LA A+ + RRD +G V + I G+ + + S ++KDI
Sbjct: 150 IGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDVVVI-GKDFYREYSFELKDI 208
>gi|126309277|ref|XP_001370876.1| PREDICTED: proteasome subunit beta type-6-like [Monodelphis
domestica]
Length = 246
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 49 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLSFHS 108
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL M +YR L G ++A +D G Q+Y + G
Sbjct: 109 IELNEPPLVHTAANLFKEMCYRYR---------EDLMAGIIVAGWDPREGGQVYSVPMGG 159
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR ++E++ +A+ A RD SGG +RL
Sbjct: 160 MMVRQPFSIGGSGSSYIYGYVDASYREGMNEKQCLQFTANALALAMDRDGSSGGVIRLAA 219
Query: 282 INGQGWQ-QVLSRD 294
I +G + QVL D
Sbjct: 220 ITEKGVERQVLMGD 233
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T+ +V + + T AG+ D + + E + Y+ + MTI+ A L+ N
Sbjct: 35 IASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLVNVESQLYKMRRNESMTIKGIATLMSN 94
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CVGSGAEYA 238
+ N + P + L+ D+ GP +Y LD G IE T+ GSG+ A
Sbjct: 95 FL------NSNRYYP--MMVQLLIGGVDKN-GPGIYSLDALGGSIEETRISATGSGSPMA 145
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+L+ YR D++ +E LA AI++A +RD SG + + I + ++++ +VK I
Sbjct: 146 YGVLEDQYREDMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFRRLDPEEVKSI 205
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T+ ++ ++ + T AG D + + E K Y + MT+R +LL N
Sbjct: 5 IASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSN 64
Query: 180 MV--RKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV-GSGAE 236
++ R+Y P + L+ D+ GPQL+ LD G I+ K GSG+
Sbjct: 65 VLASRRY--------FPFMVQL--LLGGVDK-KGPQLFSLDALGGSIQEQKVVATGSGSP 113
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
A +L+ Y P+++ EE L AI++A +RD SG ++ KI G++ +V+
Sbjct: 114 TAYGVLEALYDPEMTVEEGMKLGVRAIHNAMKRDSASGDVIQAVKITAGGYEVADESEVE 173
Query: 297 DI 298
I
Sbjct: 174 KI 175
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLR---SGGFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ ++ LS EEA
Sbjct: 147 -----ILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 GVATKAIRSAVERDLASGNGINIAVVTEDG 230
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + EG++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQK---------VEEIHP 88
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLR---SGGFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ ++ LS EEA
Sbjct: 147 -----ILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 GVATKAIRSAVERDLASGNGINIAVVTEDG 230
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + EG++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQK---------VEEIHP 88
>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
Length = 214
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 105 YTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGY 160
Y GG G S++S V ++I V I C +AG+ AD + + +
Sbjct: 21 YNGGVIIGSDSRASVGGSYVSSKAINKLIQVHDRIFCCIAGSLADAQHVTRVAKFQLSFH 80
Query: 161 ECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNT 220
+ + ++ AA +L + R L G + A +D+ GPQ+Y +
Sbjct: 81 SIQMGSPPLVKAAATVLKELCYSNR---------EDLEAGFITAGWDKKKGPQVYTVSMG 131
Query: 221 GLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
G+LI GSG+ Y +D Y+PD+S EE +A+ A RD SGG L
Sbjct: 132 GMLISQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALAIGRDNVSGGIAHLV 191
Query: 281 KINGQGWQQVL 291
I G + V+
Sbjct: 192 VITEGGVEHVV 202
>gi|195120908|ref|XP_002004963.1| GI19318 [Drosophila mojavensis]
gi|193910031|gb|EDW08898.1| GI19318 [Drosophila mojavensis]
Length = 224
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L + GG G +++S V + T+ ++ ++ I C +G+AA S+
Sbjct: 12 ILAAEFDGGVVLGADTRTSCRTYVSNRTADKLTRITDHIYCCRSGSAAQTQTLAESVGSS 71
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
G++ + +A+ L+ + ++R +S++ L ++A +D LG Q+Y
Sbjct: 72 LCGFQ-------NVSNASCLVRDAAVQFRNKIYSTR--KLLLASIIVAGWDRALGGQVYT 122
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+ +GLL+ GSG+ Y Q + ++P L++E+A + AI A R+D SGG
Sbjct: 123 VPISGLLVPERYAMAGSGSSYIQGFMAAHFKPGLNQEDAVDVVKRAIRLAIRQDCSSGGV 182
Query: 277 VRLYKINGQG 286
+R+ I G
Sbjct: 183 IRIGIITADG 192
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ + +++++ + S I T+AG D + L E + Y+ M ++ A L
Sbjct: 38 IANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASL 97
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ +YR P LS L+ D GP L+ +D G + GSG+ YA
Sbjct: 98 ILFQYR--------PI-LSVQMLIGGVDSD-GPSLFSVDWLGTVTREKYTATGSGSPYAV 147
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
++L+ +YR DLS EEA LA A+ A RD SG V + I +G
Sbjct: 148 SLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSGEGVDIATITKEG 194
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ + I T+AG+ D + ++ E K Y+ + M A LL N++
Sbjct: 46 KLYKIDDYIAMTIAGSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILH---- 101
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
GN L G YD + GP+L+ LD G L E T F GSG+ A +L+ +
Sbjct: 102 GNRHFPFLTQLIIG----GYDNLHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGVLEAE 157
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ----QVLSRDVKDIYND 301
Y+ D++ + LA A+ A RD +SG + L I+ G + + + + V+ I +
Sbjct: 158 YKKDMTINKGKELAVKALISAMERDAYSGNGISLAVIDENGVKIYSDEEIEKMVEKIRKN 217
Query: 302 RKE 304
R++
Sbjct: 218 RRK 220
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ----------SSLGDSCELL 51
++ GTTT+G +G++LATD RAT +LI ++ K + S+GD+ L+
Sbjct: 10 YMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLV 69
Query: 52 HPV 54
+
Sbjct: 70 RMI 72
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V H + ++ + + I T+AG+ AD + ++ E Y + +++ AA
Sbjct: 30 SMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMKVISAETSLYRLRNGKDISLEAAA 89
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+ N++ HSS P + TL+ D+ G +Y LD G +I+ T GSG
Sbjct: 90 AVSSNIL-------HSS--PAYVQ--TLIGGVDD-TGASIYSLDAAGGMIKDTFISTGSG 137
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ +A +L+ + D++ EEA +A AI A RD SG + + G++ + +
Sbjct: 138 STFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFSGNGFLVANVTKDGFKMLEKEE 197
Query: 295 VKDI 298
V I
Sbjct: 198 VDAI 201
>gi|209735834|gb|ACI68786.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD + + +
Sbjct: 40 FDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADIVTYQLGFHS 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL +YR L G ++A +D+ G Q++ + G
Sbjct: 100 IELDEPPLVQTAANLFKQTCYRYR---------EELMAGIIVAGWDKRRGGQVHTVPMGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D++Y+P +++EE T A+ A RD SGG RL
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERDGSSGGVARLAA 210
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 211 ITEEGLER 218
>gi|29841433|gb|AAP06465.1| similar to XM_027825 proteasome (prosome, macropain) subunit, beta
type 6 in Homo sapiens [Schistosoma japonicum]
Length = 218
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 86 SQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGN 142
S++ Q I +G + L Y GG G S++S+ V + + ++ ++ SI C +G+
Sbjct: 9 SENVQGISTGTT--LFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCCRSGS 66
Query: 143 AADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTL 202
AAD + + + + T+ AA + YR + L G +
Sbjct: 67 AADTQTVADMVRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYR---------DDLVAGII 117
Query: 203 MAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSA 262
+A +DE G Q+Y + G+LI GSG+ Y +D D R ++ EE
Sbjct: 118 VAGWDEQSGGQIYSIPLGGMLIRQPIVIGGSGSTYTYGYVDHDIRKGMTREECINFVLKG 177
Query: 263 IYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
+ A RD SGGC+RL I+ G +++L++
Sbjct: 178 VALAINRDGSSGGCIRLAIISKDGVERILTK 208
>gi|190359942|sp|A7KE01.1|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
AltName: Full=Low molecular mass protein 2-delta-A;
Flags: Precursor
gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 19 ILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE A +A+ A RD SGG
Sbjct: 130 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 190 VAHLVVITEEGVEHVV 205
>gi|432090757|gb|ELK24087.1| Proteasome subunit beta type-6 [Myotis davidii]
Length = 238
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 41 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 101 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDSQEGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAS 211
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I+ G + QVL D ++ PP
Sbjct: 212 ISESGVERQVLLGDQIPKFSIATLPPP 238
>gi|319996713|ref|NP_001188447.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|18157531|dbj|BAB83846.1| PSMB9-like [Oryzias latipes]
gi|295901528|dbj|BAJ07281.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + + AA++L + + L G + A +D+ GPQ+Y
Sbjct: 79 QLSFHSIQMESPPLVISAASVLKQLCYNNK---------EELQAGFITAGWDKKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G++I GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + ++
Sbjct: 190 VANLVVITKEGVEHIV 205
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + MT + A+LL N++
Sbjct: 39 KILPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAMAHLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y E P L LD G LI GSG+ +A A+L+ +
Sbjct: 94 -NENKWFPYMVQI--IIGGYVE--EPTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGF 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
R D+S EEA LA A+ A +RD+++G V++ I+ G ++
Sbjct: 149 RKDMSLEEAKELAVRAVRTAGKRDVYTGDRKVQVVVISKDGMKE 192
>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD
Sbjct: 19 ILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKMAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA+++ R +S+K L G + A +D GPQ+Y
Sbjct: 79 QLSFHSIQMESPPLVKAAASIM-------RELCYSNK--EELRAGFITAGWDRKKGPQIY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+L+ GSG+ Y +D ++PD++ EEA +T+A+ A RD SGG
Sbjct: 130 VVSLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
V L I G + ++
Sbjct: 190 VVHLVVITEAGVKHIV 205
>gi|340504857|gb|EGR31264.1| proteasome subunit y, putative [Ichthyophthirius multifiliis]
Length = 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 26/232 (11%)
Query: 77 QDHFLSPPLSQ---SSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIP 130
Q L+ P SQ ++Q I +G + ++ VY GG G S++S+ + + ++
Sbjct: 6 QADILAMPDSQDFMNNQQITTGTT--IMAVVYDGGVLIGADSRTSSGQYIVDRVADKLDY 63
Query: 131 VSSSILCTLAGNAAD----CVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
V I C +G+AAD C Y + + + E R ++ AA L NM+ +Y+
Sbjct: 64 VHDRIFCLRSGSAADTQTLCTYVRYYI--DVHTVESGRRPA--VKTAAKLFQNMIYEYK- 118
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ LS ++A D++LGPQ+Y ++ G + + GSG+ Y +D+++
Sbjct: 119 --------DNLSAAVIVAGVDDLLGPQIYNVNPNGSIFKQQCATGGSGSGYIYGFVDSNF 170
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+ ++S +EA AI + RD SGG +RL I + ++ D+KD+
Sbjct: 171 KENMSLDEAKKFIKQAISLSMSRDGSSGGIMRLMNITKEKVEREFV-DLKDL 221
>gi|294893111|ref|XP_002774336.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239879674|gb|EER06152.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 290
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 172 HAANLLVNMVRKYRTGNHSSKI-----PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEG 226
HA +L ++ + K +T + ++ L+ G ++A +D+ GPQ+Y + G +I+
Sbjct: 159 HANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSIPLGGTIIKQ 218
Query: 227 TKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKIN 283
GSG+ Y ++D YRPD+S EEA A+ HA RD SGG +R+ +
Sbjct: 219 NIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGGVIRVTTVT 275
>gi|440909600|gb|ELR59489.1| Proteasome subunit beta type-9 [Bos grunniens mutus]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+ S V + ++ P+ I C L+G+AAD A + + +
Sbjct: 28 FDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHG 87
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN++ N+ KYR LS ++A +D+ G Q+Y +G
Sbjct: 88 MELEEPPLVLAAANVVRNITYKYR---------EDLSAHLMVAGWDQREGGQVYGT-MSG 137
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+LI GSG+ Y +D Y+P +S EE T+AI A +RD SGG V L
Sbjct: 138 MLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVVYLAT 197
Query: 282 INGQGWQQ--VLSRDVKDIYND 301
I G G +L ++ Y++
Sbjct: 198 ITGAGVDHRVILGDELPRFYDE 219
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN---L 176
+ H ++ + + T++G AD L L + Y+ +Y+ + IR N L
Sbjct: 27 IAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLTLRAREYKIEYKRPIPIRALVNYVSL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
++ R Y HS ++ D G LYM+D G + GSG+
Sbjct: 87 ILFYSRPYIYLVHS-----------IIGGVDREEGAVLYMVDWLGTVTRERYIATGSGSP 135
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
YA+ L+ YR D+S E+A LA ++ A R D SG + + I +G+++V + K
Sbjct: 136 YAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDPGSGEGIDVVVITKEGFRRVFTAQQK 195
Query: 297 DIYND 301
I +
Sbjct: 196 IIITE 200
>gi|221123833|ref|XP_002155191.1| PREDICTED: proteasome subunit beta type-6-like [Hydra
magnipapillata]
Length = 234
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
++ + GG G S++++ V + + ++ PV+ +I C +G+AAD + E
Sbjct: 37 IMAVEFDGGVVVGADSRTTSGSYVANRVTDKLTPVTDNIFCCRSGSAADTQAIADQVRYE 96
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
+ + ++ AANL N+ + R + S G ++A +DE G Q+Y
Sbjct: 97 LDMHMAESGRQALVKTAANLFRNVCYERR---------DSASAGIIVAGWDEREGGQVYS 147
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+ G+ + GSG+ Y D+ + +S++E T+A+ A RD SGGC
Sbjct: 148 VPIGGMCLRQPFSIGGSGSTYIYGHCDSTFVKGMSKDECIKFVTNAVALAIFRDGSSGGC 207
Query: 277 VRLYKINGQGWQQ 289
+RL IN G ++
Sbjct: 208 IRLAIINKDGVER 220
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V V + AG AD +L E + YE + M +R AA LL ++
Sbjct: 38 KVFKVGDRMGMACAGLYADMQAIARALENEIRYYEISNKRKMKVRSAARLLGLIL----- 92
Query: 187 GNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
+S+K+ P L T+ YD+ P++++LD G +IE VG+GA A A+LD +
Sbjct: 93 --YSNKLFP--LMTETVFGGYDD--EPRIFVLDPVGSVIEEKYSAVGTGAPLAMALLDKE 146
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSG 274
YR D+S EEA LA ++ A RD SG
Sbjct: 147 YREDMSLEEAQNLAIESVKVASGRDSLSG 175
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V V + AG D + + L E K Y + M+++ A L+ N++
Sbjct: 36 KVFQVDDHLAIAGAGLVGDILSLVRLLRAEAKLYRARVGREMSVKAMATLVSNVL----- 90
Query: 187 GNHSSK-IPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
H S+ +P F L+ YD + P+LY +D G + E GSG E+A A+L+ +
Sbjct: 91 --HGSRYLPYFAWF--LIGGYD--VRPRLYSIDAAGGVTEERFIAAGSGMEFALALLEEN 144
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
+ + EE LA A+ A RRD+++G V + I +G++++
Sbjct: 145 FSDGMDLEEGVDLAVRAVKAAMRRDVYTGEGVTVVTITKEGYREL 189
>gi|417397665|gb|JAA45866.1| Putative proteasome beta 6 subunit [Desmodus rotundus]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMAKEECLQFTANALALAMERDGSSGGVIRLAS 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IEESGVERQVLLGDQIPKFTIATLPPP 239
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ H + ++ + I T+AG +D + + E + + + + AA L N
Sbjct: 35 IAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSN 94
Query: 180 MVRKYRTGNHSSKIPNGLSF--GTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
++ HSS+ G F TL+ D+ GP LY LD TG +I+ GSG+
Sbjct: 95 IL-------HSSR---GYPFYVQTLLGGVDD-KGPALYSLDPTGGVIKDLMISTGSGSPV 143
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI-NGQGWQQVLSRDVK 296
A +L+ Y DL EE +A AI A RD +SG + + I +G++++ +VK
Sbjct: 144 AYGVLEDRYSEDLYVEEGIDVAIRAIKSAMERDAYSGNSILVATITEAEGFKKLSEEEVK 203
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + S+ E + YE + M+++ + LL N +R +G P
Sbjct: 92 LTIAGSVSAAQSLIRSIRAEVRLYESRRGEDMSMQALSTLLGNFLR---SGAFYIVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ +D+ G +Y +D G ++E GSG++YA +L+ +Y DLS EEA
Sbjct: 147 -----ILGGFDD-EGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYSNDLSIEEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
A AI A RD+ SG + + + G + +D +D+
Sbjct: 201 TTAARAIKSAVERDLASGNGINVCVVTEDGVEITQHKDFEDV 242
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + +G++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQK---------VEEIHP 88
>gi|432867841|ref|XP_004071304.1| PREDICTED: proteasome subunit beta type-6-like [Oryzias latipes]
Length = 232
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 88 SSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAA 144
S Q + +G + ++ Y GG G S+++T + + + ++ + I C +G+AA
Sbjct: 25 SRQEVSTGTT--IMAVEYDGGVVVGADSRTTTGAYIANRVTDKLTRIHDRIYCCRSGSAA 82
Query: 145 DCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMA 204
D ++ + + + + AA+L +YR L G L+A
Sbjct: 83 DTQAIAEVVSYQLGFHSIELDEPPLVETAAHLFRASCYRYR---------EELMAGILVA 133
Query: 205 AYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIY 264
+D G Q+Y + G+L+ GSG+ Y +D++Y+P LS+++ L T A+
Sbjct: 134 GWDRRKGGQVYCVPIGGMLVRQPVSVGGSGSSYIYGFMDSNYKPGLSKDQCLDLTTKALT 193
Query: 265 HACRRDIHSGGCVRLYKINGQGWQQ 289
A RD SGG VRL I+ G ++
Sbjct: 194 LAMERDGSSGGVVRLATISEDGVER 218
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKY----RTGMTIRHAANLLVNMVR 182
+V V+ +I G AD + L K K Y Y +T +IR AA LL ++
Sbjct: 42 KVFKVNDNIGIASIGILAD----MQVLTKIAKAYMSLYALDTKTRPSIRSAAKLLSYVLF 97
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
R + ++ G DE GP L+++D+ G LIE VG+G + A AIL
Sbjct: 98 ANRVLPYFVEVLVG-------GVDDE--GPHLFIMDSLGSLIEDDYAAVGTGTKLAIAIL 148
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+++Y+P ++ +EA LA AI + RD SG + + I G G +
Sbjct: 149 ESNYKPSMTVKEARELAIKAINQSISRDPVSGDGIDILTITGNGSAE 195
>gi|301118843|ref|XP_002907149.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262105661|gb|EEY63713.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 673
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++ST V + S ++ P+ + C +G+AAD +L+ + Y
Sbjct: 483 FNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADT----QALSDYVRYYL 538
Query: 162 CKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYML 217
+ + + AANL +R+ + +K + L G ++A +D + G Q++ +
Sbjct: 539 SSHSVELGRLPKVGTAANL-------FRSLCYHNK--DRLLAGIIVAGWDPVKGGQVFSI 589
Query: 218 DNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
G ++E GSG+ Y ++D++YRP++++EE A+ HA RD SGG +
Sbjct: 590 PIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVI 649
Query: 278 RLYKI 282
R I
Sbjct: 650 RTVTI 654
>gi|348561057|ref|XP_003466329.1| PREDICTED: proteasome subunit beta type-6-like [Cavia porcellus]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MLVRQSFAIGGSGSSYIYGYVDATYRKGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IEEAGVERQVLLGD 226
>gi|77735723|ref|NP_001029560.1| proteasome subunit beta type-9 precursor [Bos taurus]
gi|108860909|sp|Q3SZC2.1|PSB9_BOVIN RecName: Full=Proteasome subunit beta type-9; AltName:
Full=Proteasome subunit beta-1i; Flags: Precursor
gi|63169163|gb|AAY34699.1| proteosome subunit beta type 9 [Bos taurus]
gi|74267808|gb|AAI02964.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Bos taurus]
gi|296474568|tpg|DAA16683.1| TPA: proteasome subunit beta type-9 precursor [Bos taurus]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+ S V + ++ P+ I C L+G+AAD A + + +
Sbjct: 28 FDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHG 87
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN++ N+ KYR LS ++A +D+ G Q+Y +G
Sbjct: 88 MELEEPPLVLAAANVVRNITYKYR---------EDLSAHLMVAGWDQREGGQVYGT-MSG 137
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+LI GSG+ Y +D Y+P +S EE T+AI A +RD SGG + L
Sbjct: 138 MLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLAT 197
Query: 282 INGQGWQQ--VLSRDVKDIYND 301
I G G +L ++ Y++
Sbjct: 198 ITGAGVDHRVILGDELPRFYDE 219
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTG---MTIRHAANLLVNMVRK 183
+++ + I T AG+ AD + ++++ K Y Y +G +T++ A L N++ +
Sbjct: 51 KILYIDERIGITTAGSVAD-LQFIYNYLKNI--YHYNYISGNRPVTVKALATYLTNILSQ 107
Query: 184 YRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILD 243
+ + +I L+ YD + P+L+ LD G + E T GSG+ A +L+
Sbjct: 108 SKYFPYLVQI--------LIGGYD--VQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLE 157
Query: 244 TDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
YRP ++ +EA LAT A+ A +RD +G V + KI G Q+ K+++ K
Sbjct: 158 DGYRPSMTPDEAVELATRAVLSAIKRDSFTGTGVIVTKITKDGHQE------KEVFPQGK 211
Query: 304 E 304
E
Sbjct: 212 E 212
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ H ++ + + T+AG+ D + L E + Y+ + T+R AA++ N
Sbjct: 35 IAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASN 94
Query: 180 MVRKYRTGNHSSKI-PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYA 238
++ H+S++ P L+ DE GP++Y +D G IE GSG+ A
Sbjct: 95 IL-------HASRMFP--FIVQMLIGGIDE-TGPKIYSVDPAGGKIEDKYVSTGSGSPIA 144
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI-NGQGWQQVLSRDVK 296
+L+ Y+ D+S E+A +A AI + +RD SG + L + +G+++ + +K
Sbjct: 145 YGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTFSGDGISLAVVTEKEGFKRFDEKYIK 203
>gi|301104168|ref|XP_002901169.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262101103|gb|EEY59155.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 218
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++ST V + S ++ P+ + C +G+AAD +L+ + Y
Sbjct: 28 FNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADT----QALSDYVRYYL 83
Query: 162 CKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYML 217
+ + + AANL +R+ + +K + L G ++A +D + G Q++ +
Sbjct: 84 SSHSVELGRLPKVGTAANL-------FRSLCYHNK--DRLLAGIIVAGWDPVKGGQVFSI 134
Query: 218 DNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
G ++E GSG+ Y ++D++YRP++++EE A+ HA RD SGG +
Sbjct: 135 PIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVI 194
Query: 278 RLYKIN 283
R I
Sbjct: 195 RTVTIT 200
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V + + AG D + + L E K Y K M+++ A L+ N++
Sbjct: 43 KVFQIDDHLAIAGAGLVGDILSLVRLLRAEAKLYRAKVGREMSVKALATLVSNVL----- 97
Query: 187 GNHSSK-IPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
H S+ +P F L+ YD + P+LY +D G + E GSG E+A A+L+ +
Sbjct: 98 --HGSRHLPYFAWF--LIGGYD--VKPRLYSIDAAGGVTEERFIAAGSGMEFALALLEEN 151
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
+ + +E LA A+ A RRD+++G V + I +G++++
Sbjct: 152 FSDGMGLDEGIDLAVRAVKAAIRRDVYTGEGVTVVAITKEGYREL 196
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE-CKYRTGMTIRHAANLLVNMVRKYR 185
+++ + I T AG+ AD + ++++ K Y +T++ A L N++ + +
Sbjct: 54 KIVYIDDRIGMTTAGSVAD-LQFIYNYMKNIYHYNLISGNRPVTVKSLATYLTNILSQNK 112
Query: 186 TGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
+ +I LM YD P+L+ LD G + E T GSG+ A +L+
Sbjct: 113 YFPYLVQI--------LMGGYDT--QPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDG 162
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRKEA 305
Y PDL+ ++A LA A+ A +RD +G V + KI +G + ++IY +RKEA
Sbjct: 163 YSPDLTGDQAMDLAARAVMSAIKRDSFTGTGVIVTKITKEGHVE------REIYPNRKEA 216
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 116 QSSTVPH----NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
Q +T+ H T+ +V + + T AG+ D + ++ E + Y+ + MTI+
Sbjct: 27 QRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIK 86
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-C 230
A L+ N + N + P + L+ D+ GP +Y LD G IE T+
Sbjct: 87 GIATLMSNFL------NANRYYP--MMVQLLIGGVDK-NGPAIYSLDPMGGSIEETRISA 137
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
GSG+ A +L+ YR D++ +E LA AI++A +RD SG + + I + ++++
Sbjct: 138 TGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRL 197
Query: 291 LSRDVK 296
+VK
Sbjct: 198 DPEEVK 203
>gi|2118156|pir||I49121 proteasome endopeptidase complex (EC 3.4.25.1) delta chain - mouse
gi|984940|gb|AAA75376.1| delta proteasome subunit [Mus musculus]
Length = 202
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 5 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVTDAVTYQLGFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 65 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 116 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 175
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 176 IQESGVERQVLLGDQIPKFTIATLPPP 202
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+++P++ I T AG+ D L E + Y+ + M+ + ANLL N++
Sbjct: 40 KIVPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMSTKAMANLLSNIL----- 94
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
N + P + ++ Y E P L LD G LI GSG+ +A A+L+ +
Sbjct: 95 -NENKWFPYLVQI--IIGGYVE--EPTLANLDPMGGLIFDDYTATGSGSPFAIAVLEDGF 149
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
+ D+S +EA LA A+ A +RD+++G V++ I G ++
Sbjct: 150 KKDMSVKEARELAIRAVRTAGKRDVYTGSRKVQVVVITKDGMKE 193
>gi|294867461|ref|XP_002765110.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
gi|239865032|gb|EEQ97827.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 172 HAANLLVNMVRKYRTGNHSSKI-----PNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEG 226
HA +L ++ + K +T + ++ L+ G ++A +D+ GPQ+Y + G +I+
Sbjct: 53 HANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSIPLGGTIIKQ 112
Query: 227 TKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI 282
GSG+ Y ++D YRPD+S EEA A+ HA RD SGG +R+ +
Sbjct: 113 NIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGGVIRVTTV 168
>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD +
Sbjct: 19 ILTVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S+EE A +A+ A RD +GG
Sbjct: 130 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVTGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 190 VAHLVVITEEGVEHVV 205
>gi|296202288|ref|XP_002748328.1| PREDICTED: proteasome subunit beta type-6 [Callithrix jacchus]
gi|403279806|ref|XP_003931435.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|301778105|ref|XP_002924515.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
melanoleuca]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|225712736|gb|ACO12214.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|225712738|gb|ACO12215.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|290462661|gb|ADD24378.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
gi|290561791|gb|ADD38293.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
Length = 227
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S+ S V + S ++ PVS +ILC +G+AAD ++ Y + A
Sbjct: 50 SRGSLVVNRESNKLTPVSENILCCRSGSAADTQAIAKAVRYNLDMYNVMMGETAPVETVA 109
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
+ ++ +YR + L+ G L+ +D+I G Q+Y + G+ + GSG
Sbjct: 110 YMFKSICYEYR---------DSLTAGILIGGWDKIKGGQVYSIPLGGMCVRQPYTSGGSG 160
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRD 294
+ Y A + +Y+ D+S+EE L I A D SGG R I G + RD
Sbjct: 161 SVYLHAFMSANYKKDMSKEECRDLLVKGIASAVEFDGSSGGSCRWASITKDG----IERD 216
Query: 295 V 295
+
Sbjct: 217 I 217
>gi|378792316|pdb|3UNB|N Chain N, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792330|pdb|3UNB|BB Chain b, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792344|pdb|3UNB|PP Chain p, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792358|pdb|3UNB|4 Chain 4, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792372|pdb|3UNE|N Chain N, Mouse Constitutive 20s Proteasome
gi|378792386|pdb|3UNE|BB Chain b, Mouse Constitutive 20s Proteasome
gi|378792400|pdb|3UNE|PP Chain p, Mouse Constitutive 20s Proteasome
gi|378792414|pdb|3UNE|4 Chain 4, Mouse Constitutive 20s Proteasome
Length = 205
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 8 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 67
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 68 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 118
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 119 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 178
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 179 IQESGVERQVLLGDQIPKFTIATLPPP 205
>gi|984938|gb|AAA75375.1| delta proteasome subunit [Mus musculus]
Length = 202
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 5 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 65 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 116 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 175
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 176 IQESGVERQVLLGDQIPKFTIATLPPP 202
>gi|395836618|ref|XP_003791250.1| PREDICTED: proteasome subunit beta type-6 [Otolemur garnettii]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLEFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|401417224|ref|XP_003873105.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489333|emb|CBZ24592.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 283
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L Y GG S++S+ V + S ++ ++ I C +G+AAD +LA+
Sbjct: 57 ILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTKKIYCCRSGSAADT----QALAER 112
Query: 157 CKGYECKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
Y Y+T + + AANL M R +S G ++A YD I G
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWN---------ISAGIIVAGYDLINGG 163
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+Y + + G ++ GSG+ + + D +Y+PD+S+ E A A+ HA RD
Sbjct: 164 SVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRAVAHAYSRDGS 223
Query: 273 SGGCVRLYKING 284
SGG +R ++
Sbjct: 224 SGGLIRTITLDA 235
>gi|73955410|ref|XP_849241.1| PREDICTED: proteasome subunit beta type-6 [Canis lupus familiaris]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|395533603|ref|XP_003768845.1| PREDICTED: proteasome subunit beta type-6 [Sarcophilus harrisii]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLSFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AANL M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAANLFKEMCYRYR---------EDLMAGIIVAGWDPYEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D Y+ ++E++ +A+ A RD SGG +RL
Sbjct: 153 MMVRQPFSIGGSGSSYIYGYVDASYQEGMNEKQCLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I +G + QVL D
Sbjct: 213 ITEKGVERQVLMGD 226
>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
Length = 223
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCV----YWLHS 152
++ + GG G S++ST V + + ++ P+ ++ +G+AAD Y H
Sbjct: 18 IIAVTFNGGVILGADSRTSTGNYVANRVTDKITPLCDNVYTLRSGSAADTQAIAGYVQHF 77
Query: 153 LAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
+A+ ++ + +T++ AANL+ M N+ + GL ++A +D+ G
Sbjct: 78 IAQ----HQAEEGDHVTVKTAANLVKMMAY-----NNKDIMQAGL----IVAGFDKYGGG 124
Query: 213 QLYMLDNTGLLIEGTKFCV-GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDI 271
Q+Y + + G I T F + GSG+ Y D +R ++SEEEA T A+ +A D
Sbjct: 125 QVYSI-SLGGTITATPFSMSGSGSTYINGFCDKYWRENMSEEEAMDFVTRALRYAMTWDA 183
Query: 272 HSGGCVRLYKINGQG 286
SGGC+R I G
Sbjct: 184 SSGGCIRTVTITAAG 198
>gi|444722976|gb|ELW63648.1| Proteasome subunit beta type-6 [Tupaia chinensis]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y + MT + ANLL N++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMIARILEAEARYYYFAWGRPMTTKAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAY-DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
N + P + ++ Y DE P + LD G LI GSG +A AIL+
Sbjct: 94 -NENKWFPYLVQI--IIGGYVDE---PTIANLDPYGGLIFDNYTATGSGTPFAIAILEEG 147
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
Y+ +L EEA LA AI A RD+++G V++ I +G Q+
Sbjct: 148 YKENLGIEEAKELAIKAIKAAGSRDVYTGSKKVQVVTITKEGMQE 192
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAAN---L 176
+ H ++ + + T++G AD L L+ + Y +++ + IR N L
Sbjct: 27 IAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLSLRAREYRVEHKRPIPIRALVNYVSL 86
Query: 177 LVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAE 236
L+ R Y HS ++ D GP LYM+D G + + GSG+
Sbjct: 87 LLFYSRPYIYLVHS-----------IVGGVDAEEGPVLYMVDWLGTVTKEKYIATGSGSP 135
Query: 237 YAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI-NGQGWQQVLSRDV 295
YA+ L+ YR DL+ +EA LA A+ A R D SG + + I G+++V +
Sbjct: 136 YAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVVTITKSDGFRRVFTTQQ 195
Query: 296 KDI 298
K I
Sbjct: 196 KII 198
>gi|380798123|gb|AFE70937.1| proteasome subunit beta type-6, partial [Macaca mulatta]
Length = 218
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 21 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 80
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 81 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 131
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 132 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 191
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 192 IAESGVERQVLLGDQIPKFAIATLPPP 218
>gi|291405211|ref|XP_002718873.1| PREDICTED: proteasome beta 6 subunit [Oryctolagus cuniculus]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|149724885|ref|XP_001504802.1| PREDICTED: proteasome subunit beta type-6-like [Equus caballus]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|260793274|ref|XP_002591637.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
gi|229276846|gb|EEN47648.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
Length = 232
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++++ + + + ++ P+ I C +G+AAD ++ +
Sbjct: 40 FAGGVVIGADSRTTSGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAIADIVSYHTSFHS 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ +R AANL ++ ++R L+ G ++A +D+ G Q+Y + G
Sbjct: 100 IEVGEPPLVRTAANLFKDLCYRHR---------EDLTAGIIVAGWDKRKGGQVYSVPLGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D+ ++ +++EE + + + A RD SGG +RL
Sbjct: 151 MLVRQPVAIGGSGSTYVYGYVDSHFKEGMTKEECFQFCANTLALAMFRDGSSGGVIRLAA 210
Query: 282 INGQGWQQ 289
IN G ++
Sbjct: 211 INEDGIER 218
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLR---SGGFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ ++ LS +EA
Sbjct: 147 -----ILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 QVATKAIRSAVERDLASGNGINIAVVTEDG 230
>gi|426383645|ref|XP_004058389.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Gorilla
gorilla gorilla]
gi|426383647|ref|XP_004058390.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Gorilla
gorilla gorilla]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFAIATLPPP 239
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + S+ E + YE + M++ + LL N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSIRAEVRLYEARRGEDMSMEALSTLLGNFLR---SGGFFIVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ D+ GP +Y +D G +IE GSG++YA +L+ Y DLS EEA
Sbjct: 147 -----ILGGVDDD-GPHIYSIDPAGSIIEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+A +I A RD+ SG + + + G + D +++
Sbjct: 201 TVAARSIESAVERDLASGNGINVCVVTEDGVEITQHEDFEEL 242
>gi|431893962|gb|ELK03768.1| Proteasome subunit beta type-6 [Pteropus alecto]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAESGVERQVLLGD 226
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ ++ + T+AG+ D L E K +E + M+I + LL N++ + R
Sbjct: 42 KIYRITDNAAMTIAGSVGDGQRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRY 101
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
+ ++ L+ D+ GP++Y LD G IE KF GSG+ A +L+
Sbjct: 102 APYYVQV--------LIGGLDK-AGPKIYSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDR 152
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV-KDIYN 300
Y+P +S EE LA A+ A +RD SG ++ I + + ++ R+V K + N
Sbjct: 153 YKPGMSVEEGVELAARALESAMKRDSASGNGMQFCVITAEKF-EIFEREVSKQVIN 207
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y+ + MT R ANLL N++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANLLSNIL----- 93
Query: 187 GNHSSKIPNGLSFGTLMAAY-DEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTD 245
N + P + ++ Y DE P + LD G LI GSG +A AIL+
Sbjct: 94 -NENKWFPYLVQI--IIGGYVDE---PTIANLDPLGGLIFDDYTATGSGTPFAIAILEEG 147
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSG 274
YR +L E+A LA A+ A RD+++G
Sbjct: 148 YRKNLGIEKAKELAIKAVKAAGARDVYTG 176
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 139 LAGNAADCVYWLHSLAK----ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIP 194
LA +A + + SLA+ K YE + R T+R A LL ++ R +++
Sbjct: 49 LAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEV- 107
Query: 195 NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEE 254
L+ DE G L ++D G LIE +G+GA+ A ++LDT YR D++ ++
Sbjct: 108 -------LVGGVDE-EGSHLIVMDPLGSLIEDNYAALGTGAKLAISVLDTGYREDITLQD 159
Query: 255 AYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
A LA A+ A RD SGG + L I+ G ++
Sbjct: 160 AKKLAVKALKAAIERDPVSGGGIDLVLIDQTGAKE 194
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 140 AGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMV--RKYRTGNHSSKIPNGL 197
AG+ D + + L E K Y + M+ + A L N++ R+Y P
Sbjct: 52 AGSVGDILSLVRLLRAEAKLYRARVGREMSTKALATLTSNILSGRRY--------FP--- 100
Query: 198 SFG-TLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
FG L+A YDE P LY +D G + E GSG E+A ++LD +Y ++ ++
Sbjct: 101 YFGWFLVAGYDE--KPGLYSIDMAGGITEDKYVSAGSGMEFAYSVLDNEYDEKMNVKKGV 158
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
LA AI A +RD+ +G + + I +G+ ++ +V+ I
Sbjct: 159 KLAIKAINTAIKRDVFTGDGIMVVVITKEGYSELSKEEVEKI 200
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLR---SGGFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ ++ LS +EA
Sbjct: 147 -----ILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 QVATKAIRSAVERDLASGNGINIAVVTEDG 230
>gi|238231384|ref|NP_032972.3| proteasome subunit beta type-6 precursor [Mus musculus]
gi|84028244|sp|Q60692.3|PSB6_MOUSE RecName: Full=Proteasome subunit beta type-6; AltName: Full=Low
molecular mass protein 19; AltName: Full=Macropain delta
chain; AltName: Full=Multicatalytic endopeptidase
complex delta chain; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|26347247|dbj|BAC37272.1| unnamed protein product [Mus musculus]
gi|74189010|dbj|BAE39271.1| unnamed protein product [Mus musculus]
gi|74191020|dbj|BAE39351.1| unnamed protein product [Mus musculus]
gi|148680630|gb|EDL12577.1| mCG21162, isoform CRA_b [Mus musculus]
gi|745475|prf||2016287A housekeeping proteasome:SUBUNIT=2
Length = 238
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 41 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 101 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 212 IQESGVERQVLLGDQIPKFTIATLPPP 238
>gi|355753644|gb|EHH57609.1| hypothetical protein EGM_07288 [Macaca fascicularis]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFAIATLPPP 239
>gi|344290109|ref|XP_003416781.1| PREDICTED: proteasome subunit beta type-6-like [Loxodonta africana]
Length = 211
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 14 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 73
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 74 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 124
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 125 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLHFTANALALAMERDGSSGGVIRLAA 184
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 185 IAESGVERQVLLGDQIPKFAIATLPPP 211
>gi|297699722|ref|XP_002826924.1| PREDICTED: proteasome subunit beta type-6 [Pongo abelii]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFAIATLPPP 239
>gi|21465649|pdb|1IRU|H Chain H, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465663|pdb|1IRU|V Chain V, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 205
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 8 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 67
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 68 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 118
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 119 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 178
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 179 IAESGVERQVLLGD 192
>gi|332257645|ref|XP_003277915.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Nomascus
leucogenys]
gi|402898362|ref|XP_003912192.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Papio anubis]
gi|402898364|ref|XP_003912193.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Papio anubis]
gi|402898366|ref|XP_003912194.1| PREDICTED: proteasome subunit beta type-6 isoform 3 [Papio anubis]
gi|402898368|ref|XP_003912195.1| PREDICTED: proteasome subunit beta type-6 isoform 4 [Papio anubis]
gi|441662335|ref|XP_004091589.1| PREDICTED: proteasome subunit beta type-6 [Nomascus leucogenys]
gi|441662338|ref|XP_004091590.1| PREDICTED: proteasome subunit beta type-6 [Nomascus leucogenys]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFAIATLPPP 239
>gi|255078980|ref|XP_002503070.1| predicted protein [Micromonas sp. RCC299]
gi|226518336|gb|ACO64328.1| predicted protein [Micromonas sp. RCC299]
Length = 237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 20/199 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD----CVYWLHS 152
++ VY GG G S++ST V + S ++ V ++ +G+AAD C + + +
Sbjct: 25 IMACVYDGGVVLGADSRTSTGNYVANRASDKITQVMDNVWMCRSGSAADTQNVCAF-VKN 83
Query: 153 LAKECKGYECKYRTGMT-IRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILG 211
+E GM ++ AN V M YR + LS G ++A +D G
Sbjct: 84 AVEEHGIMSGSDEPGMADVKLVAN--VTMQIAYRNKDR-------LSAGMIIAGWDRRAG 134
Query: 212 PQLYMLDNTGLLIEGTKFCVG-SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
PQ++ + G L E F +G SG+ Y D ++P +S EEA A AI A RD
Sbjct: 135 PQVFGIPLGGSL-EKCDFTLGGSGSAYITGFCDDTWKPGMSREEAEAWIRRAISIAISRD 193
Query: 271 IHSGGCVRLYKINGQGWQQ 289
SGG +RL I+ +G ++
Sbjct: 194 ASSGGVIRLVTIHEKGAEK 212
>gi|307611968|ref|NP_001182643.1| proteasome (prosome, macropain) subunit, beta type, 6 [Macaca
mulatta]
gi|355568119|gb|EHH24400.1| hypothetical protein EGK_08055 [Macaca mulatta]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFAIATLPPP 239
>gi|224473832|gb|ACN49171.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 217
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ GG G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + + AA++L + + L G + A +D GPQ+Y
Sbjct: 79 QLSFHSIQMESPPLVISAASVLKQLCYNNK---------EELQAGFITAGWDRKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G+LI GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMLIGQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I G + ++
Sbjct: 190 VANLVVITEAGVEHIV 205
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V + ++IP++ IL +G AD + L E K E R M + AA
Sbjct: 22 SMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAA 81
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQ------LYMLDNTGLLIEGTK 228
NLL +++ + R + P GL I GP +Y LD G + E
Sbjct: 82 NLLSHLLYQNRFYLN----PLGLL----------IAGPINSKEFGIYSLDGIGAISEIKD 127
Query: 229 -FCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW 287
F GSG A L+ +Y PD++ +A LA A+ + RD+ SG + +Y I +G
Sbjct: 128 YFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEIYTITKKGV 187
Query: 288 QQVL 291
+++
Sbjct: 188 EKLF 191
>gi|344259274|gb|AEN03334.1| proteasome subunit beta type 6 [Sus scrofa]
gi|344259276|gb|AEN03335.1| proteasome subunit beta type 6 [Sus scrofa]
Length = 239
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 213 IAESGVERQVLLGDQIPKFTIATLPPP 239
>gi|281352167|gb|EFB27751.1| hypothetical protein PANDA_013817 [Ailuropoda melanoleuca]
Length = 238
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAESGVERQVLLGD 226
>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
Length = 229
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
++ + GG G S++S+ V + + ++ ++ I C +G+AAD +A
Sbjct: 18 IMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKIYCCRSGSAADTQAIADIVAYS 77
Query: 157 CKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYM 216
YE + + AA+ N YR + L G ++A YDE G Q+Y
Sbjct: 78 LNYYENQTNKDALVHEAASEFRNFCYNYR---------DSLLAGIIVAGYDEERGGQVYS 128
Query: 217 LDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGC 276
+ G+L GSG+ + + YR ++S+EE A+ HA D SGG
Sbjct: 129 IPLGGMLTREACTIGGSGSSFIYGFVREHYRQNMSKEECVDFVKKAVQHAIYHDGSSGGV 188
Query: 277 VRLYKINGQGWQQVL 291
VR+ I G ++ L
Sbjct: 189 VRIGIITKDGIERRL 203
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ V+ + T AG+ D + + E YE + T++ A +L N++
Sbjct: 44 KIYQVADRVAMTTAGSVGDAQFLARLVKVEASLYETRKEEKPTVKAIATMLSNLL----- 98
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
N S P F L+ + GP ++ +D G IE T GSG+ A +L+
Sbjct: 99 -NSSRYFPY---FVQLLIGGVDKRGPSMFSIDPIGGAIEETDIVATGSGSPTAYGVLEDR 154
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
Y P+++ +E LA AI A +RD SG + + KI + Q+ +V +I
Sbjct: 155 YYPEITTQEGVELAIRAITSAMKRDSASGDGIDVVKITKDEYVQLTPEEVDEI 207
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 1 MFITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
M GTTT+G +GI+LAT+ RAT + I S++ K Q
Sbjct: 7 MVFKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQ 47
>gi|286248|dbj|BAA01586.1| proteasome subunit R-DELTA [Rattus sp.]
Length = 202
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 5 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 65 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 116 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 175
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 176 IQQSGVERQVLLGD 189
>gi|346716138|ref|NP_001138398.2| proteasome subunit beta type-6 [Sus scrofa]
Length = 241
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 44 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 103
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 104 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIVAGWDPQEGGQVYSVPMGG 154
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 155 MMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 214
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 215 IAESGVERQVLLGDQIPKFTIATLPPP 241
>gi|303283082|ref|XP_003060832.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457183|gb|EEH54482.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD----CVYWLHS 152
++ VY GG G S++ST V + S ++ V+ ++ +G+AAD C Y + +
Sbjct: 25 IMACVYDGGVVLGADSRTSTGVYVANRASDKISSVTDNVWMCRSGSAADTQNVCAY-VKN 83
Query: 153 LAKECKGYECKYRTGMT-IRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILG 211
L + GM ++ ANL + + K + + LS G ++ +D G
Sbjct: 84 LVDQHNMERSDADPGMADVKLVANLTMQIAYKNK---------DKLSAGMIIGGWDSKRG 134
Query: 212 PQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDI 271
PQ+Y + G L+ GSG Y D ++ +S EEA A T AI A D
Sbjct: 135 PQVYGIPLGGSLLPCPFTIGGSGGAYIYGWCDDTWKEGMSREEAEAWVTRAISLAITMDS 194
Query: 272 HSGGCVRLYKINGQG 286
SGG +RL I+ +G
Sbjct: 195 SSGGVIRLVTIDDKG 209
>gi|114665820|ref|XP_511290.2| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan
troglodytes]
gi|332847027|ref|XP_003315370.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
gi|397477772|ref|XP_003810243.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Pan paniscus]
gi|397477774|ref|XP_003810244.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Pan paniscus]
gi|397477776|ref|XP_003810245.1| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan paniscus]
gi|410050910|ref|XP_003952994.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAESGVERQVLLGD 226
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 135 ILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIP 194
I T+AG+ D + L+ E K Y+ + MT L N++ GN +
Sbjct: 55 IAMTIAGSVGDAQSLIRLLSAEAKIYKMRTGNNMTPLSCTTLTSNVLH----GNRHYPLL 110
Query: 195 NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDTDYRPDLSEE 253
L G YD I GP+L+ LD G + E + F GSG+ A +L+ +Y+ +++ E
Sbjct: 111 TQLIIG----GYDLINGPKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYKSEINIE 166
Query: 254 EAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+ +A A+ A +RD +SG + L KI+ G
Sbjct: 167 KGLLIAVKALISAMQRDAYSGNGISLAKIDKTG 199
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKF 39
++ GTTT+G +G++LATD RAT +LI ++ K
Sbjct: 11 YMKGTTTVGLICEDGVVLATDKRATMGNLIADKEAKKL 48
>gi|47216874|emb|CAG11681.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
V T +VI V I C +AG+ AD + + + + T + AA++L
Sbjct: 6 VSSKTINKVIKVHDRIFCCMAGSLADAQAVTKAAKFQLSFHSIQMETPPLVISAASVLKE 65
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ + + L G + A +D GPQ+Y++ G+L+ GSG+ +
Sbjct: 66 LCYQNK---------EELQAGFITAGWDSRDGPQVYVVSLGGMLLRQPVTIGGSGSTFIY 116
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
+D Y+P++S EE AT+A+ A RD SGG L I G + V+
Sbjct: 117 GYVDAKYKPNMSREECLQFATNALALAMGRDNVSGGVANLVVITEAGVEHVV 168
>gi|23110925|ref|NP_002789.1| proteasome subunit beta type-6 isoform 1 proprotein [Homo sapiens]
gi|20532407|sp|P28072.4|PSB6_HUMAN RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome delta chain; AltName: Full=Proteasome
subunit Y; Flags: Precursor
gi|12654059|gb|AAH00835.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|32879961|gb|AAP88811.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|48146247|emb|CAG33346.1| PSMB6 [Homo sapiens]
gi|60654877|gb|AAX32003.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654879|gb|AAX32004.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654881|gb|AAX32005.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654883|gb|AAX32006.1| proteasome subunit beta type 6 [synthetic construct]
gi|119610813|gb|EAW90407.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|123980626|gb|ABM82142.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|123995447|gb|ABM85325.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|189053089|dbj|BAG34711.1| unnamed protein product [Homo sapiens]
gi|208967174|dbj|BAG73601.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAESGVERQVLLGD 226
>gi|348684993|gb|EGZ24808.1| hypothetical protein PHYSODRAFT_350003 [Phytophthora sojae]
Length = 637
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++S + + S ++ P+ + C +G+AAD +L+ + Y
Sbjct: 447 FKGGVVLGADSRTSMGTYIANRVSDKLTPLHDRLYCCRSGSAADT----QALSDYVRYYL 502
Query: 162 CKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYML 217
+ + + AANL +R+ + +K + L G ++A +D + G Q++ +
Sbjct: 503 SSHSVELGRLPKVGTAANL-------FRSLCYHNK--DRLLAGIIVAGWDPVKGGQVFSI 553
Query: 218 DNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCV 277
G ++E GSG+ Y ++D++YRPD+++EE A+ HA RD SGG +
Sbjct: 554 PIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPDMTKEECQQFVKKALAHAMARDGSSGGVI 613
Query: 278 RLYKIN 283
R I
Sbjct: 614 RTVTIT 619
>gi|307109183|gb|EFN57421.1| hypothetical protein CHLNCDRAFT_56068 [Chlorella variabilis]
Length = 217
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADC------VYWL 150
++ Y GG G S++ST V + + ++ P++ + +G+AAD V W
Sbjct: 5 IMAASYDGGVVMGADSRTSTGSYVANRVTDKITPLTDRVYICRSGSAADTQNLSRYVQWF 64
Query: 151 HSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEIL 210
E G E ++ AA L M + + +S GL+ G ++A +D+
Sbjct: 65 L----EQHGMELGDDP--EVKTAAKLAQTMAYQNKNLLQAS---GGLA-GLIVAGWDKHH 114
Query: 211 GPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRD 270
G ++ + G L++ GSG+ Y + D +RP++SEEE A A+ HA RD
Sbjct: 115 GGSVFAIPLGGTLVKVPFSIGGSGSAYINGLCDRLWRPNMSEEECKAFVVKAVSHAMARD 174
Query: 271 IHSGGCVRLYKINGQGWQQ 289
SGGC+R I+ G ++
Sbjct: 175 GSSGGCIRTVVISKDGIKR 193
>gi|410979655|ref|XP_003996197.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Felis catus]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + +VL D + PP
Sbjct: 213 IEESGVERRVLLGDQIPKFTIATLPPP 239
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKY----RTGMTIRHAANLLVNMVR 182
+V V+ +I G AD + L K K Y Y +T +IR AA LL ++
Sbjct: 42 KVFKVNDNIGMASIGILAD----MQVLTKIAKAYMSLYSLDTKTRPSIRSAAKLLSYVLF 97
Query: 183 KYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAIL 242
R + ++ L+ D+ GP L+++D G LIE VG+G + A AIL
Sbjct: 98 SNRILPYFVEV--------LVGGIDD-EGPHLFIMDALGSLIEDDYAAVGTGTKLAIAIL 148
Query: 243 DTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+++Y+P +S +EA LA AI + RD SG + + I G G +
Sbjct: 149 ESNYKPGMSIKEARDLAIKAINQSISRDPVSGDGIDILTITGNGSTE 195
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 139 LAGNAADCVYWLHSLAK----ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIP 194
LA +A + + SLA+ K YE + R T+R A LL ++ R +++
Sbjct: 49 LAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEV- 107
Query: 195 NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEE 254
L+ DE G L ++D G LIE +G+GA+ A ++LDT YR D++ ++
Sbjct: 108 -------LVGGVDE-EGNHLIVMDPLGSLIEDNYAALGTGAKLAISVLDTGYREDITLQD 159
Query: 255 AYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
A LA A+ A RD SGG + L I+ G ++
Sbjct: 160 AKKLAVKALKAAIERDPVSGGGIDLVLIDQTGAKE 194
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 116 QSSTVPH----NTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR 171
Q +T+ H T+ +V + + T AG+ D + ++ E + Y+ + MTI+
Sbjct: 27 QRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIK 86
Query: 172 HAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-C 230
A L+ N + N + P + L+ D+ GP +Y LD G IE T+
Sbjct: 87 GIATLMSNFL------NANRYYP--MMVQLLIGGVDK-NGPAIYSLDAMGGSIEETRISA 137
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
GSG+ A +L+ Y+ D++ +E LA AI++A +RD SG + + I + ++++
Sbjct: 138 TGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASGENIDVVVITKEAFKRL 197
Query: 291 LSRDVK 296
+VK
Sbjct: 198 DPEEVK 203
>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
Length = 232
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V + +++ V SS T++G+ + + SL E + YE + T M++ A
Sbjct: 59 SAGNMVASKNARKILQVHSSAALTISGSVSAAQSLVESLRAEVRLYETRRDTAMSLNALA 118
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
NL N++R +GN P L DE G +Y + G ++E T GSG
Sbjct: 119 NLTANLLR---SGNFQIVQP------VLGGVDDE--GAHIYSIGPGGSVMEETYAASGSG 167
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+ +A +L+ +Y + S ++A A A+ A RD SG + L I +G
Sbjct: 168 SPFALGVLEGEYDEEASVDDAETTAARAVQSATERDTASGNGLSLATITDEG 219
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ ++ +I T+AG+ D L E K +E + M+I + LL N++
Sbjct: 41 KIYKLTDNIAMTIAGSVGDGQRLARILQVEAKLFELRRHGPMSINALSMLLSNIL----- 95
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
+ +P L+ D+ GP++Y LD G IE KF GSG+ A +L+
Sbjct: 96 -AETKYMP--FYVQVLIGGVDK-SGPRIYSLDPLGGRIEEVKFSSTGSGSPIAYGVLEDR 151
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
Y+PD+S E+ LA A+ A +RD SG ++ I + + ++ R+V
Sbjct: 152 YKPDISVEQGVELAAKALESAMKRDSASGNGMQFAVITHEKF-EIFEREV 200
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 111 CGPFSQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI 170
GP S V +V V + T+AG+ + + SL E + YE + M++
Sbjct: 71 LGPMVSSKDVQ-----KVEEVHPTGALTIAGSVSAAQSLISSLRAEVRLYESRRGEDMSM 125
Query: 171 RHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC 230
+ + L+ N +R TG P ++ D+ G +Y +D G ++E
Sbjct: 126 QALSTLVGNFLR---TGGFYIVQP-------ILGGVDDD-GAHIYSIDPAGSILEEEYTV 174
Query: 231 VGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
GSG++YA +L+ ++ DLS +EA +AT AI A RD+ SG + + + +G
Sbjct: 175 TGSGSQYALGVLEQEFSDDLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTDEG 230
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + EG++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQK---------VEEVHP 88
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ H + +++ ++ + T AG AD L + + +T+R AA+LL
Sbjct: 45 IAHRKTRKILKITDKMALTTAGLVADAQVLADWLNTQMNYLTITKKQPVTVREAAHLLSL 104
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
++ +Y+ ++ ++ YD P+L+ LD G L+E GSG+ A
Sbjct: 105 LLYRYKLFPFYVQL--------ILGGYDT--APRLFSLDLYGSLVEEKYTSTGSGSPIAI 154
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+L+ YR ++S EEA LA A+ A +RD +G V I +G ++
Sbjct: 155 GVLEDGYRENMSPEEARKLAVKAVQMALKRDSATGDGVDSVIITSEGIKE 204
>gi|410925072|ref|XP_003976005.1| PREDICTED: proteasome subunit beta type-6-like [Takifugu rubripes]
Length = 232
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 88 SSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAA 144
+SQ + +G + ++ Y GG G S+++T + + + ++ + I C +G+AA
Sbjct: 25 TSQEVSTGTT--IMAVEYDGGVVIGADSRTTTGAYIANRVTDKLTKIHDRIFCCRSGSAA 82
Query: 145 DCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMA 204
D + + + + + AANL +YR L+ G L+A
Sbjct: 83 DTQAIADVVTYQLGFHSIELDEPPLVETAANLFKASCYRYR---------EELTAGILVA 133
Query: 205 AYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIY 264
+D G Q+Y + G+L+ GSG+ Y +D++Y+P LS+E+ LA +A+
Sbjct: 134 GWDRRKGGQVYSVPIGGMLVRQPVSVGGSGSSYIYGFMDSNYKPGLSKEQCLELAAAALS 193
Query: 265 HACRRDIHSGGCVRLYKINGQGWQQ 289
A RD SGG +RL I+ G ++
Sbjct: 194 LAMERDGSSGGVIRLASISEDGVER 218
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y+ + M+ + ANLL N++ + R
Sbjct: 58 KIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMSTKAMANLLSNILNENRW 117
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ +I ++ Y E P + LD G LI GSG +A AIL+ Y
Sbjct: 118 FPYLVQI--------IIGGYVE--EPTIANLDPLGGLIFEDYTATGSGTPFALAILEEGY 167
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSG 274
R +L E+A LA AI A RD+++G
Sbjct: 168 RKNLGIEKAKDLAIKAIKAAGSRDVYTG 195
>gi|54019419|ref|NP_476440.2| proteasome subunit beta type-6 [Rattus norvegicus]
gi|84028245|sp|P28073.3|PSB6_RAT RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome chain 5; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|37231619|gb|AAH58451.1| Proteasome (prosome, macropain) subunit, beta type 6 [Rattus
norvegicus]
gi|149053199|gb|EDM05016.1| rCG33991, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 41 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 101 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 212 IQQSGVERQVLLGD 225
>gi|293357141|ref|XP_002729074.1| PREDICTED: proteasome subunit beta type-6 [Rattus norvegicus]
gi|392338679|ref|XP_003753602.1| PREDICTED: proteasome subunit beta type-6 [Rattus norvegicus]
gi|47169486|tpe|CAE48380.1| TPA: proteasome subunit beta type 6-like [Rattus norvegicus]
gi|149048484|gb|EDM01025.1| rCG63409 [Rattus norvegicus]
Length = 238
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 41 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 101 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 212 IQQSGVERQVLLGD 225
>gi|412991418|emb|CCO16263.1| predicted protein [Bathycoccus prasinos]
Length = 241
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 96/227 (42%), Gaps = 20/227 (8%)
Query: 80 FLSPPLSQSSQHIISGDSCELLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSIL 136
FLS P+S + +L Y G S++ST V + S ++ + ++
Sbjct: 8 FLSIPVSTGTT---------ILACAYRTGVVLAADSRTSTGAYVANRASDKITQICDNVW 58
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR-HAANLLVNMVRKYRTGNHSSKIP- 194
+G+AAD + + K R G R + +N MV + KI
Sbjct: 59 MCRSGSAADTQN-VAAYVKRMVEEHAMERNGTGFRENESNDRAMMVDVRVVAKLTQKIAY 117
Query: 195 ---NGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLS 251
L G ++A +D + GPQ+Y + G ++E GSG+ Y LD Y+ ++
Sbjct: 118 ENKEKLQAGMIIAGWDRVRGPQVYGIPLGGSMLEAPFSVSGSGSAYIYGYLDNTYKENME 177
Query: 252 EEEAYALATSAIYHACRRDIHSGGCVRLYKI--NGQGWQQVLSRDVK 296
EE T AI A RD SGG +RL I NG Q VL +D K
Sbjct: 178 REECEKWMTEAISLAIARDASSGGVIRLVTIHENGCEKQCVLPKDHK 224
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI--RH 172
+ + + + ++ + I T+AG+ D + ++ E K Y K RTG I
Sbjct: 31 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYVSAEAKLY--KMRTGKNIPPLS 88
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CV 231
A L+ N++ GN L G YD + GP+L+ LD G L E + F
Sbjct: 89 CATLISNILH----GNRMFPFLTQLIIG----GYDLLYGPRLFSLDPIGGLNEESSFTAT 140
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGW---- 287
GSG+ A IL+ +Y D++ ++ LA A+ A RD SG + L +N +G
Sbjct: 141 GSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFSGNGISLAYVNKEGVTILE 200
Query: 288 QQVLSRDVKDIYNDRK 303
+ + + VK I RK
Sbjct: 201 DEEIEKMVKKIKRKRK 216
>gi|440897065|gb|ELR48837.1| Proteasome subunit beta type-6, partial [Bos grunniens mutus]
Length = 232
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 35 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 94
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 95 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 145
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 146 MMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 205
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 206 IAEPGVERQVLLGD 219
>gi|90077008|dbj|BAE88184.1| unnamed protein product [Macaca fascicularis]
Length = 202
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 5 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 65 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 116 TMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 175
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 176 IAESGVERQVLLGDQIPKFAIATLPPP 202
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ + + I T++G AD L SL Y+ ++IR AN +V R
Sbjct: 52 KIWKIDNHIAATMSGGVADLQKVLDSLTATAIQYKVDTGKPISIRALANYASLVVFSSR- 110
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDTD 245
P ++ +D GP +YMLD G L + T+F GSG+ A +L+
Sbjct: 111 -------PFVYLVHMILGGWDPDEGPVIYMLDFFGTLTKETEFMATGSGSPTAFGVLEDG 163
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQV 290
Y+ D+S EEA LA A+ A D SG + + I +G+++V
Sbjct: 164 YKRDMSIEEAVRLAVRAVRSAIYHDPGSGEGIDVVTITKEGYKEV 208
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++IP++ I T AG+ D L E + Y + M+ + ANLL N++ +++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQVLARILEAEARYYYFTWGRPMSTKAMANLLSNILNEHKW 98
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+ +I G DE P + LD G LI GSG +A A+L+ Y
Sbjct: 99 FPYLVQIIIG-------GYVDE---PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGY 148
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGG-CVRLYKINGQGWQQ 289
R +L E+A LA A+ A +RD+++G V++ I +G ++
Sbjct: 149 RKNLGIEKAKELAIKAVRAAGKRDVYTGSKKVQVVTITKEGMKE 192
>gi|398011837|ref|XP_003859113.1| unnamed protein product [Leishmania donovani]
gi|322497326|emb|CBZ32401.1| unnamed protein product [Leishmania donovani]
Length = 283
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L Y GG S++S+ V + S ++ ++ I C +G+AAD +LA+
Sbjct: 57 ILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTEKIYCCRSGSAADT----QALAER 112
Query: 157 CKGYECKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
Y Y+T + + AANL M R +S G ++A YD I G
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWN---------ISAGIIVAGYDPINGG 163
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+Y + + G ++ GSG+ + + D +Y+P +S+ E A A+ HA RD
Sbjct: 164 SVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRAVAHAYSRDGS 223
Query: 273 SGGCVRLYKINGQ 285
SGG +R ++ +
Sbjct: 224 SGGLIRTITLDAE 236
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 75 TQQDHFLSPPL-SQSSQHIISGDSCELL---HPVYTGGERCGPFSQSSTVPHNTSFQVIP 130
+ ++F+ P S++S I+ G + L V +R S V + +++
Sbjct: 2 VKMNNFIEPDTPSKNSIKILKGTTTVGLVAKDSVVLAADRRA--SAGFFVANKMVRKIVY 59
Query: 131 VSSSILCTLAGNAADCVYWLHSLAKECKGYEC-KYRTGMTIRHAANLLVNMVRKYRTGNH 189
+ I T AG+ AD + ++++ K Y +T++ A L N++ + + +
Sbjct: 60 IDDRIGMTTAGSVAD-LQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPY 118
Query: 190 SSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPD 249
+I L+ YD P+L+ LD G + E T GSG+ A +L+ YRPD
Sbjct: 119 LVQI--------LIGGYDT--QPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPD 168
Query: 250 LSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDIYNDRK 303
LS EEA L A+ A +RD +G V + K++ G + ++IY +RK
Sbjct: 169 LSGEEAMDLGARAVLSAIKRDSFTGTGVIVTKLSKDGHVE------REIYPNRK 216
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + +L E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISNLKAEVRLYEARRGEDMSMQALSTLVGNFLR---SGAFFVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE G +Y +D G ++E GSG++YA +L+ +Y DLS +EA
Sbjct: 147 -----ILGGVDED-GGHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSDDLSVDEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT+AI A RD+ SG + + + +G
Sbjct: 201 QVATNAIRAAVERDLASGNGINIAVVTDEG 230
>gi|74204932|dbj|BAE20959.1| unnamed protein product [Mus musculus]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 41 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 101 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211
Query: 282 INGQGWQQVLSRDVK 296
I G ++ + + K
Sbjct: 212 IQESGVERQVLLETK 226
>gi|348576420|ref|XP_003473985.1| PREDICTED: proteasome subunit beta type-9-like [Cavia porcellus]
Length = 219
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+ S V + ++ P+ I C L+G+AAD + A + + +
Sbjct: 28 FDGGVVLGSDSRVSAGQAVVNRVFDKLSPLHKHIYCALSGSAADAQAMVDLAAYQLELHG 87
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN++ N+ KYR LS ++A +D+ G Q+Y G
Sbjct: 88 MELEESPLVLAAANVVKNVSYKYR---------EELSAHLIVAGWDQRAGGQVY--GTIG 136
Query: 222 LLIEGTKFCVG-SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
++ F +G SG+ Y +D Y+P +S EE T AI A RD SGG + L
Sbjct: 137 GMLTRQPFIIGGSGSTYIHGYVDAAYKPGMSPEECRRFTTDAIALAMNRDCSSGGVIYLV 196
Query: 281 KINGQGWQQ--VLSRDVKDIYND 301
I G +L ++ Y++
Sbjct: 197 TITAAGVDHRVILGNELPKFYDE 219
>gi|384247128|gb|EIE20616.1| proteasome-domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD-------CVYW 149
++ + GG G S++ST + + + +V ++ + +G+AAD Y+
Sbjct: 25 IMAATFDGGVVLGADSRTSTGNYIANRVTDKVTQLTDRVYVCRSGSAADTQAISSYVQYY 84
Query: 150 LHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEI 209
LH ++ + + ++ AA L +V +S+K L G ++A YD
Sbjct: 85 LHQ-------HQMELNDEILVKTAATLATKLV-------YSNK--EMLQAGLIVAGYDSR 128
Query: 210 LGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRR 269
G Q+Y L G L++ GSG+ Y D ++RP +SEE+ A A+ A R
Sbjct: 129 EGGQVYALPLGGTLVKVPFSIGGSGSAYIYGFCDKNWRPGMSEEDCQAFVVKAVGLALAR 188
Query: 270 DIHSGGCVRLYKINGQGWQQ 289
D SGGC+R I G ++
Sbjct: 189 DGSSGGCIRTVVITKDGVRR 208
>gi|449442012|ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
Length = 235
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 26/192 (13%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD-------CVYWLHSLA 154
Y GG G S++ST V + S ++ ++ ++ +G+AAD Y+LH
Sbjct: 22 YKGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQVVSDYVRYFLHQ-- 79
Query: 155 KECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQL 214
+ + T++ AANL+ R +S+K N L G ++ +D+ G ++
Sbjct: 80 -----HTIQLGQPATVKVAANLV-------RLLAYSNK--NMLQTGLIVGGWDKYDGGRI 125
Query: 215 YMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSG 274
Y + G +IE GSG+ Y D ++ ++S EEA L A+ A RD SG
Sbjct: 126 YGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEEMSREEAEQLVVKAVSLAIARDGASG 185
Query: 275 GCVRLYKINGQG 286
G VR IN +G
Sbjct: 186 GVVRTVTINSEG 197
>gi|77735687|ref|NP_001029541.1| proteasome subunit beta type-6 precursor [Bos taurus]
gi|108860907|sp|Q3MHN0.1|PSB6_BOVIN RecName: Full=Proteasome subunit beta type-6; Flags: Precursor
gi|75948245|gb|AAI05177.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Bos taurus]
gi|296476732|tpg|DAA18847.1| TPA: proteasome subunit beta type-6 precursor [Bos taurus]
Length = 239
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAEPGVERQVLLGD 226
>gi|342181371|emb|CCC90850.1| putative proteasome beta-1 subunit [Trypanosoma congolense IL3000]
Length = 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
S + V + S ++ +S I C +G+AAD A +GYE + + AA
Sbjct: 75 SSGTYVVNRASNKLTKLSKKIYCCRSGSAADTQALAELTANYLEGYEADTSRPVNVASAA 134
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSG 234
N+ + R +S G ++A YD + G +Y + + G ++ GSG
Sbjct: 135 NIFKKLCYMNRWA---------ISAGIIVAGYDSVNGGSVYSIPSGGSCVKLDYALGGSG 185
Query: 235 AEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVR 278
+ + + D +Y+P ++++E L A+ HA RD SGG +R
Sbjct: 186 SIFLYSFFDANYKPGMTKDECIRLCQRAVAHAYSRDGSSGGLIR 229
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V V+ + AG AD L K YE + R +I A LL ++ R
Sbjct: 41 KVYVVNDRMALASAGVIADMQTIAKILRVNAKMYELESRRKPSIAAMAKLLSVIMFNRRI 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ L+ YDE GP +++LD G LIE +G+GA+ A +ILD +Y
Sbjct: 101 MPFIAEV--------LVGGYDE-EGPHIFVLDPVGSLIEDDYAALGTGAKMAISILDANY 151
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
D+ A LA +AI A RD SGG + L + G +
Sbjct: 152 SKDVDVSGARKLAINAIRAALERDPVSGGGIDLVTVTADGVSE 194
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + S+ E + YE + M++ + LL N +R +G P
Sbjct: 92 LTIAGSVSAAQSLIRSIRAEVRLYESRRGENMSMTALSTLLGNFLR---SGAFYVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE GP +Y +D G ++E GSG++YA +L+ +Y LS +EA
Sbjct: 147 -----ILGGVDED-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYNDALSIDEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+A A+ A RD+ SG + + + G + +D +++
Sbjct: 201 TVAARAVKSAVERDLASGNGINICVVTEDGVEITQHKDFEEV 242
>gi|195383604|ref|XP_002050516.1| GJ22197 [Drosophila virilis]
gi|194145313|gb|EDW61709.1| GJ22197 [Drosophila virilis]
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S++S V + ++ ++ ++ I C +G+A+ +++A YE
Sbjct: 17 FDGGVVMGADSRTSCRTYVSNRSADKLTRITDHIYCCRSGSASQTQTLANTVAYAMNYYE 76
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
C +R AA N + R +S I +A +D G Q+Y + TG
Sbjct: 77 CSMGEPALVRDAAVHFRNKIYDSRQTMMASII---------VAGWDRRHGGQVYSVPITG 127
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
L++ GSGA Y Q + YRP + + + L +A+ A + D SGG VRL
Sbjct: 128 LMVHEPCAVAGSGAAYIQGFVTAHYRPGMQQADTVELVKNAVQLAIQHDCSSGGIVRLGV 187
Query: 282 INGQG 286
IN G
Sbjct: 188 INEYG 192
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ + I T+AG+ D + ++ E K Y+ + MT L+ N++
Sbjct: 47 KLYKIDDYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLH---- 102
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDTD 245
GN + L G YD I G +L+ LD G + E + F GSG+ A +L+++
Sbjct: 103 GNRHYPLLTQLILG----GYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLESE 158
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ 288
Y+ D++ E+ +A A+ A +RD +SG + L IN G +
Sbjct: 159 YKSDIAIEKGLLIAVKALSSAMQRDAYSGNGISLAHINKDGVK 201
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ----------SSLGDSCELL 51
++ GTTT+G +G++LATD RAT +LI ++ K + S+GD+ L+
Sbjct: 11 YMKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 52 HPV 54
+
Sbjct: 71 RLI 73
>gi|426237420|ref|XP_004012658.1| PREDICTED: proteasome subunit beta type-6 [Ovis aries]
Length = 239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAEPGVERQVLLGD 226
>gi|2055301|dbj|BAA19761.1| proteasome subunit Y [Lethenteron camtschaticum]
Length = 231
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRH-A 173
+ S V + + ++ PV I C +G+AAD + + G+ M + H A
Sbjct: 52 TSGSYVANRVTDKLTPVHDRIFCCRSGSAADT-QAIADVVNYQLGFHSIEMEEMPLVHTA 110
Query: 174 ANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGS 233
ANL + +YR L G ++A +D+ G Q+Y + G+L+ GS
Sbjct: 111 ANLFKDYCYRYR---------EELMAGIIVAGWDKRKGGQVYTVPLGGMLVRQPFSVGGS 161
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ--VL 291
G+ Y +D++Y+ +++EE A+ A RD SGG +R+ I G ++ +
Sbjct: 162 GSTYIYGFVDSNYKTGMTKEECMEFTAKALSLAMSRDGSSGGVIRMAAITAGGVERRVLT 221
Query: 292 SRDVKDIYND 301
+D+ Y +
Sbjct: 222 GKDIPTFYEE 231
>gi|225704850|gb|ACO08271.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L + GG G S++S V T ++I V I C +AG+ AD + +
Sbjct: 14 ILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAAIKAAKF 73
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + ++ AA++L + + L G + A +D GPQ+Y
Sbjct: 74 QISFHSIQMESPPLVKAAASVLKELCYNNK---------EELQAGFITAGWDRKKGPQVY 124
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
+ G+L+ GSG+ Y D Y+PD+S EE AT+A+ A RD SGG
Sbjct: 125 TVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGG 184
Query: 276 CVRLYKINGQGWQQVL 291
L I +G + V+
Sbjct: 185 VAHLVVITEEGVEHVV 200
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCV----YWLHS 152
++ + GG S++ST + + + ++ P+ ++ +G+AAD Y H
Sbjct: 5 IIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAIAGYVQHF 64
Query: 153 LAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
+A+ ++ + + ++ AANL+ M + + L G ++A YD+ G
Sbjct: 65 IAQ----HQAEEGEHINVKTAANLVKMMAYNNK---------DNLQAGLIVAGYDKHGGG 111
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
Q++ + G + E + GSG+ Y +D +R +SE+EA T A+ +A D
Sbjct: 112 QVFSISLGGTITETSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKALRYAMTWDAS 171
Query: 273 SGGCVRLYKINGQGWQQVL 291
SGGC+R I G ++
Sbjct: 172 SGGCMRTVTITASGVKRTF 190
>gi|157865801|ref|XP_001681607.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
gi|68124905|emb|CAJ02350.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
Length = 283
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L Y GG S++S+ V + S ++ ++ I C +G+AAD +LA+
Sbjct: 57 ILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTEKIYCCRSGSAADT----QALAER 112
Query: 157 CKGYECKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
Y Y+T + + AANL M R +S G ++A YD I G
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWN---------ISAGIIVAGYDPINGG 163
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+Y + + G ++ GSG+ + + D +Y+P +S+ E A A+ HA RD
Sbjct: 164 SVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRAVAHAYSRDGS 223
Query: 273 SGGCVRLYKING 284
SGG +R ++
Sbjct: 224 SGGLIRTITLDA 235
>gi|256391621|ref|YP_003113185.1| 20S proteasome subunits A and B [Catenulispora acidiphila DSM
44928]
gi|302595822|sp|C7PVV2.1|PSB_CATAD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256357847|gb|ACU71344.1| 20S proteasome A and B subunits [Catenulispora acidiphila DSM
44928]
Length = 288
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V P +AG+A V + E + YE ++ AN L M+R
Sbjct: 93 KVFPADEFSAVGIAGSAGLAVEVVRLFQLELEHYEKIEGVTLSTDGKANRLATMIR---- 148
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGP-QLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDT 244
GN + + GL+ L A YDE G +++ D TG + E F VGSG+ +A+ L
Sbjct: 149 GNLAMAM-QGLAVVPLFAGYDEETGQGRIFSYDVTGGMYEEHDFYSVGSGSMFARGALKK 207
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKI-------NGQGWQQV----LSR 293
+RPD + E+A A A+Y A D +GG KI G++++ LS
Sbjct: 208 LFRPDFTAEDAAVAAVQALYDAADDDSATGGPDLFRKIFPVVAVVTEDGYRRLPDEELST 267
Query: 294 DVKDIYNDRKEAPPG 308
V+ I + R+ P G
Sbjct: 268 LVESIMDARRVVPDG 282
>gi|339897076|ref|XP_001463938.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
gi|321399047|emb|CAM66312.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
Length = 283
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 100 LLHPVYTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKE 156
+L Y GG S++S+ V + S ++ ++ I C +G+AAD +LA+
Sbjct: 57 ILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTEKIYCCRSGSAADT----QALAER 112
Query: 157 CKGYECKYRTGM----TIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGP 212
Y Y+T + + AANL M R +S G ++A YD I G
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWN---------ISAGIIVAGYDPINGG 163
Query: 213 QLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIH 272
+Y + + G ++ GSG+ + + D +Y+P +S+ E A A+ HA RD
Sbjct: 164 SVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKGECVAFCQRAVAHAYSRDGS 223
Query: 273 SGGCVRLYKINGQ 285
SGG +R ++ +
Sbjct: 224 SGGLIRTITLDAE 236
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI--RH 172
S + V + ++ + I T+AG+ D + L E K Y K RTG I
Sbjct: 27 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLTAEAKLY--KMRTGRNIPPLA 84
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CV 231
A LL N++ HSS++ L+ ++ YD + G +L+ LD G + E F
Sbjct: 85 CATLLSNIL-------HSSRVFPFLT-QIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTAT 136
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A +L+ Y ++S EE LA +A+ A RD SG + L I +G +
Sbjct: 137 GSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNGISLAVITKEGVKIFE 196
Query: 292 SRDVKDIYN 300
+++ I +
Sbjct: 197 DEEIEKILD 205
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAA 174
+ S + + + ++ + + T AG D + + E + Y+ + G+T++
Sbjct: 28 TMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVRMVQVEARLYKMQRGEGLTVKAVT 87
Query: 175 NLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCV-GS 233
+L N++ R ++ +M D GP++Y LD G IE + GS
Sbjct: 88 TMLANILSSRRYYPFMVQL--------IMGGVDR-YGPRIYSLDALGGQIEERRIVATGS 138
Query: 234 GAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSR 293
G+ A +L+ Y+P +S E+ LA AI++A +RD SG + L +I + +++V
Sbjct: 139 GSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASGDKIELVRITDK-YEEVGEP 197
Query: 294 DVKDIYN 300
+ +I N
Sbjct: 198 EYSEIMN 204
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ +N + ++ + TLAG AD + L + + + + I+ A L
Sbjct: 38 IANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSL 97
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ + R + I LM +D + GP LY +D G + E + GSG+ A
Sbjct: 98 IFHQNRGYPFMADI--------LMGGFDAV-GPALYNIDMFGSVEEKSYVTTGSGSPVAY 148
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
L+ +YR DL+ +EA +A A+ A R+I +G + + ING G+ ++L+R+ K
Sbjct: 149 GTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGF-ELLTREQK 204
>gi|558528|dbj|BAA06098.1| proteasome subunit Y [Homo sapiens]
Length = 239
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 42 FDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHS 101
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q Y + G
Sbjct: 102 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQGYSVPMGG 152
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GSG+ Y +D YR +++EE +A+ A RD SGG +RL
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212
Query: 282 INGQGWQ-QVLSRD 294
I G + QVL D
Sbjct: 213 IAESGVERQVLLGD 226
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + +L E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISNLKAEVRLYEARRGEDMSMQALSTLVGNFLR---SGAFFVVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
++ DE G +Y +D G ++E GSG++YA +L+ +Y DL+ +EA
Sbjct: 147 -----ILGGVDED-GGHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSDDLTVDEAK 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT+AI A RD+ SG + + + +G
Sbjct: 201 QVATNAIRAAVERDLASGNGINIAVVTDEG 230
>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 195
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ +N + ++ + TLAG AD + L + + + + I+ A L
Sbjct: 23 IANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSL 82
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
+ + R + I LM +D + GP LY +D G + E + GSG+ A
Sbjct: 83 IFHQNRGYPFMADI--------LMGGFDAV-GPALYNIDMFGSVEEKSYVTTGSGSPVAY 133
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVK 296
L+ +YR DL+ +EA +A A+ A R+I +G + + ING G+ ++L+R+ K
Sbjct: 134 GTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGF-ELLTREQK 189
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 118 STVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLL 177
S V + + ++ + I T+AG + + L E Y+ + M+I A L
Sbjct: 33 SLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDILKAEISLYKLRNEKDMSIDALAVLT 92
Query: 178 VNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEY 237
N+++ T++A D+ G +LY LD +G I T GSG+ Y
Sbjct: 93 SNILK-----------SRPYYVQTILAGVDKD-GAKLYTLDPSGSYIPDTFTSTGSGSPY 140
Query: 238 AQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKD 297
A +L+ Y D++ EE +A AI A RD++SG RL I G + ++
Sbjct: 141 AFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNNYRLGVITKDGMKIYTKEEIAQ 200
Query: 298 I 298
I
Sbjct: 201 I 201
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 5 GTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ 41
GTTT+GF +G++LAT++RAT L+ ++ +K Q
Sbjct: 9 GTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQ 45
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 13/190 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIR--H 172
S + V + ++ + I T+AG+ D + L E K Y K RTG I
Sbjct: 27 SMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLLTAEAKLY--KMRTGKNISPLA 84
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CV 231
A LL N++ R +++ ++ YD + G +L+ LD G + E F
Sbjct: 85 CATLLSNILHSNRYFPFLTQL--------IIGGYDLLEGAKLFSLDPLGGMNEEKTFTAT 136
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A +L+ Y D+ EE LA A+ A RD +SG + L I +G +
Sbjct: 137 GSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNGISLAVITKEGVKIFE 196
Query: 292 SRDVKDIYND 301
+++ I N+
Sbjct: 197 DEEIEKILNE 206
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ ++ +I T+AG+ D L E K +E + M+I + LL N++ +YR
Sbjct: 41 KIYQLTDNIAMTIAGSVGDGQRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRI 100
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYAQAILDTD 245
L+ D+ GP+L+ LD G I KF GSG+ A +L+
Sbjct: 101 ----------FYIQVLVGGVDKS-GPKLFSLDPAGGRITEVKFSSTGSGSPLAYGVLEDR 149
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDV 295
Y+ D+S E+ LA A+ A +RD SG ++ I G ++ R+V
Sbjct: 150 YKQDMSVEQGVELAAKALESAMKRDSASGNGMQFCVIT-PGKVEIFEREV 198
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI--RH 172
S + V + ++ + I T+AG+ D + L E K Y K RTG I
Sbjct: 27 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLY--KMRTGRNIPPLA 84
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CV 231
A LL N++ HSS++ L+ ++ YD + G +L+ LD G + E F
Sbjct: 85 CATLLSNIL-------HSSRMFPFLT-QIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTAT 136
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A +L+ Y D+S EE LA +A+ A RD SG + L I G +
Sbjct: 137 GSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKIFE 196
Query: 292 SRDVKDIYN 300
+++ I +
Sbjct: 197 DEEIEKILD 205
>gi|383850393|ref|XP_003700780.1| PREDICTED: proteasome subunit beta type-6-like isoform 1 [Megachile
rotundata]
Length = 232
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 105 YTGGERCGPFSQSSTVPHNTSF---QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + +S ++ ++ I C +G+AAD +A + Y+
Sbjct: 40 FDGGVVIGADSRATTGAYISSRFADKLTKITDYIYCCRSGSAADTQAISDIVAYDLNLYK 99
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN+ + YR + L G L+A +D G Q+Y + G
Sbjct: 100 MEVGMEPLVETAANVFRELCYNYR---------DSLMAGILVAGWDNRKGGQVYSIPLGG 150
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+ + GSG+ Y +D+ Y+P++S EE L + + A RD SGG +R+
Sbjct: 151 MCVRQPISIGGSGSTYVYGYMDSQYKPNMSREECEKLVENTLALAMARDGSSGGVIRMGV 210
Query: 282 INGQGWQQ 289
I +G ++
Sbjct: 211 ITEKGIER 218
>gi|15530232|gb|AAH13897.1| Proteasome (prosome, macropain) subunit, beta type 6 [Mus musculus]
Length = 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+++T + + + ++ P+ I C +G+AAD ++ + +
Sbjct: 5 FNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHS 64
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AA+L M +YR L G ++A +D G Q+Y + G
Sbjct: 65 IELNEPPLVHTAASLFKEMCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGG 115
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+++ + GS + Y +D YR ++++E +A+ A RD SGG +RL
Sbjct: 116 MMVRQSFAIGGSRSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 175
Query: 282 INGQGWQ-QVLSRDVKDIYNDRKEAPP 307
I G + QVL D + PP
Sbjct: 176 IQESGVERQVLLGDQIPKFTIATLPPP 202
>gi|296734|emb|CAA43963.1| macropain subunit delta [Homo sapiens]
Length = 180
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ + + ++ P+ I C +G+AAD ++ + + + + AA+L
Sbjct: 1 IANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKE 60
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQ 239
M +YR L G ++A +D G Q+Y + G+++ + GSG+ Y
Sbjct: 61 MCYRYR---------EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIY 111
Query: 240 AILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQ-QVLSRD 294
+D YR +++EE +A+ A RD SGG +RL I G + QVL D
Sbjct: 112 GYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGD 167
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 13/189 (6%)
Query: 115 SQSSTVPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTI--RH 172
S + V + ++ + I T+AG+ D + L E K Y K RTG I
Sbjct: 22 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLY--KMRTGRNIPPLA 79
Query: 173 AANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CV 231
A LL N++ HSS++ L+ ++ YD + G +L+ LD G + E F
Sbjct: 80 CATLLSNIL-------HSSRMFPFLT-QIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTAT 131
Query: 232 GSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVL 291
GSG+ A +L+ Y D+S EE LA +A+ A RD SG + L I G +
Sbjct: 132 GSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKIFE 191
Query: 292 SRDVKDIYN 300
+++ I +
Sbjct: 192 DEEIEKILD 200
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 120 VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVN 179
+ T+ ++ + I T AG+ D + ++ E K ++ + +TI+ LL N
Sbjct: 36 IASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRIISVESKLFKMRRNEPITIKGITTLLSN 95
Query: 180 MVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFC-VGSGAEYA 238
++ R P L ++ D+ GP +Y LD G IE T GSG+
Sbjct: 96 LLSGQRY------FP--LMVQLIVGGVDKT-GPNMYSLDPLGGRIEETNIVATGSGSPIT 146
Query: 239 QAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQVLSRDVKDI 298
+L+ Y D++ +E LA A+++A +RD SG + + I G++Q+ D +++
Sbjct: 147 YGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASGDGIDVVVITKDGYKQL---DEEEV 203
Query: 299 YNDR 302
N R
Sbjct: 204 NNKR 207
>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAAD-------CVYWLHSLA 154
Y GG G S++ST V + S ++ ++ ++ +G+AAD Y+LH
Sbjct: 24 YNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQ-- 81
Query: 155 KECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQL 214
+ + T++ AANL+ R ++S+K N L G ++ +D+ G ++
Sbjct: 82 -----HTIQLGQPATVKVAANLV-------RLLSYSNK--NMLQTGMIIGGWDKYEGGKI 127
Query: 215 YMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSG 274
Y + G L+E GSG+ Y D ++ +++EEA L A+ A RD SG
Sbjct: 128 YGVPLGGTLLELPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARDGASG 187
Query: 275 GCVRLYKINGQG 286
G VR IN +G
Sbjct: 188 GVVRTVTINSEG 199
>gi|403527384|ref|YP_006662271.1| proteasome subunit beta [Arthrobacter sp. Rue61a]
gi|403229811|gb|AFR29233.1| proteasome subunit beta [Arthrobacter sp. Rue61a]
Length = 269
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+V P + +AG A + E + YE T +++ AN L M+R
Sbjct: 79 KVFPADEYSVLGIAGTAGLAIDITRLFQVELEHYEKIEGTLLSLVGKANRLGAMIR---- 134
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGP-QLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDT 244
GN + G++ L A +D++ G +L+ D TG E + VGSG+ +A+ L
Sbjct: 135 GNLPMAM-QGMAVIPLFAGFDQVAGVGRLFSYDVTGGRYEEQEHHSVGSGSVFARGALKK 193
Query: 245 DYRPDLSEEEAYALATSAIYHACRRDIHSGG--CVR-----LYKINGQGWQQVLSRDVKD 297
++P+LSEE+A ++A A+Y A D +GG VR +Y +N G ++V RD+
Sbjct: 194 LWKPNLSEEDAISVAVEALYDAADDDSATGGPDPVRQLWPVVYTVNRSGNRRVPERDLAA 253
Query: 298 I 298
I
Sbjct: 254 I 254
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 137 CTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNG 196
T+AG+ + + SL E + YE + M+++ + L+ N +R +G P
Sbjct: 92 LTIAGSVSAAQSLISSLRAEVRLYESRRGEDMSMQALSTLVGNFLR---SGGFYIVQP-- 146
Query: 197 LSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAY 256
L DE G +Y +D G ++E GSG++YA +L+ ++ DLS +EA
Sbjct: 147 ----ILGGVDDE--GAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSEDLSIDEAR 200
Query: 257 ALATSAIYHACRRDIHSGGCVRLYKINGQG 286
+AT AI A RD+ SG + + + G
Sbjct: 201 EVATKAIRSAVERDLASGNGINIAVVTEDG 230
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 4 TGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQSSLGDSCELLHP 53
TGTTT+G + EG++LATD RA+ ++ S+ + K E +HP
Sbjct: 48 TGTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQK---------VEEIHP 88
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
++ + I T+AG+ D + ++ E K Y+ + MT L+ N++
Sbjct: 47 KLYKIDDYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLH---- 102
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKF-CVGSGAEYAQAILDTD 245
GN + L G YD I G +L+ LD G + E + F GSG+ A +L+ +
Sbjct: 103 GNRHYPLLTQLILG----GYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAE 158
Query: 246 YRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQG 286
YR D++ ++ +A A+ A +RD +SG + L IN G
Sbjct: 159 YRSDVTIDKGLLVAVKALSSAMQRDAYSGNGISLAHINKDG 199
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 2 FITGTTTLGFRYPEGIILATDSRATANDLIVSQKLNKFCQ----------SSLGDSCELL 51
++ GTTT+G +G++LATD RAT +LI ++ K + S+GD+ L+
Sbjct: 11 YMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 52 HPV 54
+
Sbjct: 71 RLI 73
>gi|62122594|dbj|BAD93262.1| PSMB9-like [Oryzias latipes]
Length = 217
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 100 LLHPVYTGGERCGPFSQSST----VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAK 155
+L V+ G G S++S V T +VI V I C +AG+ AD +
Sbjct: 19 ILAAVFDRGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVTKTAKF 78
Query: 156 ECKGYECKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLY 215
+ + + + + AA++L + + L G + A +D+ GPQ+Y
Sbjct: 79 QLSFHSIQMESPPLVISAASVLKQLCYNNK---------EELQAGFITAGWDKKKGPQVY 129
Query: 216 MLDNTGLLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGG 275
++ G++I GSG+ Y +D Y+ +++ EE AT+A+ A RD SGG
Sbjct: 130 VVSLGGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGG 189
Query: 276 CVRLYKINGQGWQQVL 291
L I G + ++
Sbjct: 190 VANLVVITEAGVEHIV 205
>gi|291237252|ref|XP_002738545.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
isoform 1 [Saccoglossus kowalevskii]
Length = 233
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ G G S+++T + + + ++ PV I C +G+AA ++ +
Sbjct: 41 FKDGVVIGADSRTTTGAYIANRVTDKLTPVHERIYCCRSGSAAATQAVADIVSYHLNFHS 100
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ ++ AANL M YR + L+ G + A +DE G Q+Y + G
Sbjct: 101 IEMNEPPLVKTAANLFKEMCYNYR---------DELTAGIICAGWDEREGGQVYTIPLGG 151
Query: 222 LLIEGTKFCVGSGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYK 281
+L+ GSG+ Y +D+ ++ D+++EE ++ A RD SGG VRL
Sbjct: 152 MLLRQPFSIGGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRDGSSGGVVRLAA 211
Query: 282 INGQGWQQ--VLSRDVKDIY 299
I +G ++ +L ++ Y
Sbjct: 212 ITKEGVERHVILGNELPRFY 231
>gi|402866604|ref|XP_003897469.1| PREDICTED: proteasome subunit beta type-9 [Papio anubis]
gi|380789111|gb|AFE66431.1| proteasome subunit beta type-9 proprotein [Macaca mulatta]
Length = 219
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 105 YTGGERCGPFSQSST---VPHNTSFQVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYE 161
+ GG G S+ S V + ++ P+ I C L+G+AAD A + + +
Sbjct: 28 FDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCALSGSAADAQAVADMAAYQLELHG 87
Query: 162 CKYRTGMTIRHAANLLVNMVRKYRTGNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTG 221
+ + AAN++ N+ KYR LS ++A +D+ G Q+Y G
Sbjct: 88 IELEEPPLVLAAANVVRNITYKYR---------EDLSAHLMVAGWDQREGGQVY--GTLG 136
Query: 222 LLIEGTKFCVG-SGAEYAQAILDTDYRPDLSEEEAYALATSAIYHACRRDIHSGGCVRLY 280
++ F +G SG+ Y +D Y+P +S EE T AI A RD SGG V L
Sbjct: 137 GMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVVYLV 196
Query: 281 KINGQGWQQ--VLSRDVKDIYND 301
I G +L ++ Y++
Sbjct: 197 TITAAGVDHRVILGNELPKFYDE 219
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 127 QVIPVSSSILCTLAGNAADCVYWLHSLAKECKGYECKYRTGMTIRHAANLLVNMVRKYRT 186
+ P++S + T AG AD +A K + + + + A ++ NM+ + R
Sbjct: 36 KTFPITSQVGATCAGLVADMQILTLQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRY 95
Query: 187 GNHSSKIPNGLSFGTLMAAYDEILGPQLYMLDNTGLLIEGTKFCVGSGAEYAQAILDTDY 246
+++ G D+ P +Y LD G ++ VG+GAE A +LD Y
Sbjct: 96 FPLLTQVIVG-------GVVDK---PIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQY 145
Query: 247 RPDLSEEEAYALATSAIYHACRRDIHSGGCVRLYKINGQGWQQ 289
+P++S++EA LA A+ A RD SG + + I G ++
Sbjct: 146 KPNMSKDEAIDLAKRAVRSAALRDSASGDGIDILVITKDGIEE 188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,120,779,254
Number of Sequences: 23463169
Number of extensions: 208001036
Number of successful extensions: 399749
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 1438
Number of HSP's that attempted gapping in prelim test: 393189
Number of HSP's gapped (non-prelim): 6434
length of query: 312
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 170
effective length of database: 9,027,425,369
effective search space: 1534662312730
effective search space used: 1534662312730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)