Query psy14212
Match_columns 111
No_of_seqs 107 out of 154
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 22:19:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 98.2 2.3E-06 7.9E-11 56.9 5.3 62 1-65 36-97 (126)
2 4gco_A Protein STI-1; structur 98.2 2.6E-06 9E-11 56.7 5.5 59 4-65 5-63 (126)
3 3gyz_A Chaperone protein IPGC; 98.2 2.2E-06 7.4E-11 59.9 5.2 55 3-60 61-115 (151)
4 4ga2_A E3 SUMO-protein ligase 98.2 3.2E-06 1.1E-10 57.4 6.0 56 2-60 55-110 (150)
5 3upv_A Heat shock protein STI1 98.1 4.3E-06 1.5E-10 53.8 5.5 60 1-63 27-86 (126)
6 2xcb_A PCRH, regulatory protei 98.1 1.2E-05 4.1E-10 53.4 7.5 56 2-60 42-97 (142)
7 1hxi_A PEX5, peroxisome target 98.1 6.8E-06 2.3E-10 54.1 6.2 59 2-63 41-99 (121)
8 2l6j_A TPR repeat-containing p 98.1 9.8E-06 3.4E-10 50.1 6.5 58 2-62 28-91 (111)
9 1na3_A Designed protein CTPR2; 98.0 1.2E-05 4.1E-10 48.1 6.0 52 9-63 6-57 (91)
10 2kat_A Uncharacterized protein 98.0 1.3E-05 4.4E-10 51.0 6.3 60 1-63 8-67 (115)
11 3sz7_A HSC70 cochaperone (SGT) 98.0 1.1E-05 3.8E-10 54.4 5.5 61 1-64 34-94 (164)
12 3bee_A Putative YFRE protein; 98.0 1.1E-05 3.9E-10 52.5 5.3 53 7-59 1-53 (93)
13 2vgx_A Chaperone SYCD; alterna 98.0 1.2E-05 4.1E-10 54.7 5.3 55 3-60 46-100 (148)
14 3gyz_A Chaperone protein IPGC; 98.0 1.1E-05 3.7E-10 56.2 5.2 61 1-64 25-85 (151)
15 3q49_B STIP1 homology and U bo 97.9 1.5E-05 5.2E-10 51.1 5.5 58 2-62 33-90 (137)
16 3ma5_A Tetratricopeptide repea 97.9 2.4E-05 8.2E-10 49.6 6.1 54 7-63 2-55 (100)
17 3urz_A Uncharacterized protein 97.9 1.4E-05 4.7E-10 56.6 5.1 56 1-59 77-132 (208)
18 2kc7_A BFR218_protein; tetratr 97.8 1.7E-05 5.9E-10 48.8 4.1 49 2-53 24-73 (99)
19 2vyi_A SGTA protein; chaperone 97.8 4.4E-05 1.5E-09 47.3 6.0 60 2-64 36-95 (131)
20 2lni_A Stress-induced-phosphop 97.8 4.4E-05 1.5E-09 47.9 5.6 60 2-64 40-99 (133)
21 2xcb_A PCRH, regulatory protei 97.8 3E-05 1E-09 51.4 5.0 60 1-63 7-66 (142)
22 1elw_A TPR1-domain of HOP; HOP 97.8 4.5E-05 1.6E-09 46.6 5.5 60 2-64 28-87 (118)
23 3k9i_A BH0479 protein; putativ 97.8 1.9E-05 6.4E-10 50.8 3.8 59 2-63 14-75 (117)
24 4ga2_A E3 SUMO-protein ligase 97.8 8.4E-06 2.9E-10 55.3 2.2 60 2-64 21-80 (150)
25 3vtx_A MAMA; tetratricopeptide 97.7 5.5E-05 1.9E-09 51.1 5.5 57 2-61 97-153 (184)
26 1zu2_A Mitochondrial import re 97.7 2.8E-05 9.4E-10 56.4 4.1 60 1-60 69-136 (158)
27 2kck_A TPR repeat; tetratricop 97.7 8E-05 2.7E-09 45.2 5.6 52 8-62 2-53 (112)
28 3sz7_A HSC70 cochaperone (SGT) 97.7 4.8E-05 1.6E-09 51.2 4.9 60 2-64 69-130 (164)
29 4i17_A Hypothetical protein; T 97.7 0.00083 2.8E-08 46.8 11.5 61 1-64 99-168 (228)
30 3upv_A Heat shock protein STI1 97.7 4.8E-05 1.6E-09 48.7 4.4 57 2-61 62-124 (126)
31 3rkv_A Putative peptidylprolyl 97.7 0.0001 3.4E-09 49.5 6.2 57 6-65 57-113 (162)
32 3vtx_A MAMA; tetratricopeptide 97.7 1.2E-05 4E-10 54.5 1.3 47 1-50 130-176 (184)
33 1elw_A TPR1-domain of HOP; HOP 97.7 8.8E-05 3E-09 45.2 5.3 50 12-64 4-53 (118)
34 1na0_A Designed protein CTPR3; 97.7 0.00013 4.4E-09 44.8 6.0 59 2-63 33-91 (125)
35 2vgx_A Chaperone SYCD; alterna 97.6 4.7E-05 1.6E-09 51.7 4.0 59 2-63 11-69 (148)
36 2pl2_A Hypothetical conserved 97.6 0.00012 4.1E-09 52.0 6.3 58 2-62 29-86 (217)
37 2lni_A Stress-induced-phosphop 97.6 0.00011 3.8E-09 46.0 5.3 53 7-62 11-63 (133)
38 4gcn_A Protein STI-1; structur 97.6 3.9E-05 1.3E-09 50.7 3.2 50 12-64 8-57 (127)
39 3ieg_A DNAJ homolog subfamily 97.6 0.00016 5.4E-09 52.1 6.6 59 2-63 258-320 (359)
40 2dba_A Smooth muscle cell asso 97.6 0.00016 5.4E-09 46.2 5.9 51 7-60 23-76 (148)
41 2fbn_A 70 kDa peptidylprolyl i 97.6 0.00015 5.2E-09 50.1 6.1 45 14-61 90-134 (198)
42 2vyi_A SGTA protein; chaperone 97.5 0.00017 5.8E-09 44.6 5.5 54 7-63 7-60 (131)
43 1a17_A Serine/threonine protei 97.5 0.00016 5.4E-09 47.1 5.5 59 2-63 37-95 (166)
44 2e2e_A Formate-dependent nitri 97.5 0.00012 4E-09 49.4 4.8 54 2-58 34-87 (177)
45 2dba_A Smooth muscle cell asso 97.5 0.00016 5.5E-09 46.2 5.1 62 1-65 51-115 (148)
46 1p5q_A FKBP52, FK506-binding p 97.5 0.00019 6.5E-09 54.9 6.3 60 2-64 220-279 (336)
47 2xev_A YBGF; tetratricopeptide 97.5 0.00015 5.2E-09 45.9 4.8 57 2-61 26-88 (129)
48 3rkv_A Putative peptidylprolyl 97.5 7.9E-05 2.7E-09 50.0 3.5 58 2-62 87-145 (162)
49 4gcn_A Protein STI-1; structur 97.5 0.00026 8.9E-09 46.6 5.9 60 1-63 31-90 (127)
50 1a17_A Serine/threonine protei 97.4 0.00031 1.1E-08 45.7 6.0 54 2-58 71-124 (166)
51 3urz_A Uncharacterized protein 97.4 0.00012 4E-09 51.7 4.2 59 2-63 28-102 (208)
52 1na0_A Designed protein CTPR3; 97.4 0.00036 1.2E-08 42.7 5.8 53 8-63 4-57 (125)
53 3uq3_A Heat shock protein STI1 97.4 0.00025 8.6E-09 48.9 5.5 54 3-59 164-217 (258)
54 2kck_A TPR repeat; tetratricop 97.4 0.00015 5.3E-09 43.9 3.8 58 2-62 30-89 (112)
55 1xnf_A Lipoprotein NLPI; TPR, 97.4 0.00025 8.7E-09 49.7 5.3 58 2-62 67-124 (275)
56 1elr_A TPR2A-domain of HOP; HO 97.4 0.00016 5.5E-09 44.8 3.8 54 3-59 29-89 (131)
57 3fp2_A TPR repeat-containing p 97.4 0.00027 9.2E-09 54.5 5.8 60 1-63 48-107 (537)
58 2fbn_A 70 kDa peptidylprolyl i 97.4 0.00033 1.1E-08 48.3 5.7 60 2-64 112-171 (198)
59 1zu2_A Mitochondrial import re 97.4 0.00023 7.7E-09 51.5 4.8 62 2-63 26-94 (158)
60 2c2l_A CHIP, carboxy terminus 97.3 0.00038 1.3E-08 51.7 5.9 58 2-62 28-85 (281)
61 4i17_A Hypothetical protein; T 97.3 0.00038 1.3E-08 48.5 5.5 56 3-61 32-88 (228)
62 1kt0_A FKBP51, 51 kDa FK506-bi 97.3 0.00034 1.1E-08 55.9 5.8 60 2-64 341-400 (457)
63 2r5s_A Uncharacterized protein 97.3 0.00061 2.1E-08 46.4 6.3 55 3-60 99-155 (176)
64 3hym_B Cell division cycle pro 97.3 0.00023 8E-09 50.9 4.1 53 9-64 233-285 (330)
65 2h6f_A Protein farnesyltransfe 97.3 0.0002 6.8E-09 56.7 4.0 49 5-56 159-207 (382)
66 3q49_B STIP1 homology and U bo 97.3 0.00091 3.1E-08 42.6 6.4 54 7-63 4-57 (137)
67 2pl2_A Hypothetical conserved 97.2 0.00034 1.2E-08 49.6 4.7 57 2-61 63-130 (217)
68 4eqf_A PEX5-related protein; a 97.2 0.00056 1.9E-08 50.6 6.0 58 2-62 237-294 (365)
69 3as5_A MAMA; tetratricopeptide 97.2 0.0007 2.4E-08 44.0 5.8 59 2-63 66-124 (186)
70 2e2e_A Formate-dependent nitri 97.2 0.00038 1.3E-08 46.8 4.5 57 2-61 68-127 (177)
71 4gyw_A UDP-N-acetylglucosamine 97.2 0.0013 4.6E-08 56.4 8.9 59 2-63 33-91 (723)
72 2fo7_A Synthetic consensus TPR 97.2 0.00069 2.4E-08 41.6 5.3 56 2-60 25-80 (136)
73 2fo7_A Synthetic consensus TPR 97.2 0.00072 2.5E-08 41.5 5.2 55 2-59 59-113 (136)
74 1hh8_A P67PHOX, NCF-2, neutrop 97.2 0.00068 2.3E-08 46.3 5.4 46 11-59 36-81 (213)
75 1na3_A Designed protein CTPR2; 97.2 0.0011 3.9E-08 39.2 5.7 56 2-60 33-88 (91)
76 3ieg_A DNAJ homolog subfamily 97.1 0.00077 2.6E-08 48.4 5.8 59 2-63 27-85 (359)
77 2h6f_A Protein farnesyltransfe 97.1 0.0007 2.4E-08 53.6 6.0 60 2-64 121-181 (382)
78 3u4t_A TPR repeat-containing p 97.1 0.00047 1.6E-08 48.5 4.2 58 2-62 132-189 (272)
79 4eqf_A PEX5-related protein; a 97.1 0.00089 3E-08 49.5 5.8 58 2-62 89-146 (365)
80 3as5_A MAMA; tetratricopeptide 97.1 0.0018 6.1E-08 42.1 6.5 58 2-62 32-89 (186)
81 1fch_A Peroxisomal targeting s 97.1 0.0012 3.9E-08 48.4 6.0 58 2-62 88-145 (368)
82 1fch_A Peroxisomal targeting s 97.1 0.0011 3.8E-08 48.4 6.0 55 3-60 242-296 (368)
83 1p5q_A FKBP52, FK506-binding p 97.1 0.00083 2.8E-08 51.3 5.5 59 2-63 171-244 (336)
84 1w3b_A UDP-N-acetylglucosamine 97.0 0.00088 3E-08 50.1 5.3 59 2-63 295-353 (388)
85 3u4t_A TPR repeat-containing p 97.0 0.0019 6.6E-08 45.3 6.8 52 2-56 98-149 (272)
86 2kat_A Uncharacterized protein 97.0 0.0012 4E-08 41.6 5.2 59 2-63 43-103 (115)
87 1ihg_A Cyclophilin 40; ppiase 97.0 0.0014 4.8E-08 51.2 6.5 61 2-65 263-323 (370)
88 3ma5_A Tetratricopeptide repea 97.0 0.00095 3.2E-08 42.0 4.5 43 1-46 30-72 (100)
89 1hxi_A PEX5, peroxisome target 97.0 0.00044 1.5E-08 45.2 3.0 46 2-50 75-120 (121)
90 1elr_A TPR2A-domain of HOP; HO 97.0 0.00096 3.3E-08 41.2 4.2 58 2-63 62-126 (131)
91 2l6j_A TPR repeat-containing p 96.9 0.0023 7.7E-08 39.1 5.7 50 11-63 3-52 (111)
92 3mkr_A Coatomer subunit epsilo 96.9 0.0015 5.3E-08 48.8 5.8 57 2-61 190-246 (291)
93 2q7f_A YRRB protein; TPR, prot 96.9 0.0021 7.3E-08 44.1 6.1 54 3-59 48-101 (243)
94 3k9i_A BH0479 protein; putativ 96.9 0.00085 2.9E-08 42.8 3.7 46 2-50 51-96 (117)
95 4abn_A Tetratricopeptide repea 96.9 0.0014 4.7E-08 52.3 5.7 61 2-65 245-308 (474)
96 3uq3_A Heat shock protein STI1 96.9 0.00096 3.3E-08 45.9 4.2 54 2-58 197-256 (258)
97 2vq2_A PILW, putative fimbrial 96.9 0.0017 5.9E-08 43.7 5.3 51 4-57 34-84 (225)
98 4gyw_A UDP-N-acetylglucosamine 96.9 0.0012 4.1E-08 56.7 5.5 53 4-59 103-155 (723)
99 3cv0_A Peroxisome targeting si 96.9 0.002 6.9E-08 45.9 5.8 57 2-61 45-101 (327)
100 2if4_A ATFKBP42; FKBP-like, al 96.9 0.00064 2.2E-08 52.1 3.3 53 3-58 255-307 (338)
101 2xev_A YBGF; tetratricopeptide 96.8 0.0026 9E-08 39.9 5.7 51 2-55 63-116 (129)
102 2pzi_A Probable serine/threoni 96.8 0.0011 3.8E-08 55.5 4.9 59 2-63 457-515 (681)
103 2y4t_A DNAJ homolog subfamily 96.8 0.0028 9.6E-08 47.7 6.7 59 2-63 319-377 (450)
104 2gw1_A Mitochondrial precursor 96.8 0.0015 5.1E-08 49.7 5.2 59 1-63 29-87 (514)
105 2y4t_A DNAJ homolog subfamily 96.8 0.0016 5.6E-08 49.0 5.4 54 3-59 17-70 (450)
106 2ho1_A Type 4 fimbrial biogene 96.8 0.0029 9.8E-08 44.0 6.3 59 2-63 129-189 (252)
107 3cv0_A Peroxisome targeting si 96.8 0.002 6.8E-08 45.9 5.5 54 3-59 163-216 (327)
108 2vsy_A XCC0866; transferase, g 96.8 0.0028 9.5E-08 50.8 6.9 56 2-60 13-68 (568)
109 2q7f_A YRRB protein; TPR, prot 96.8 0.0029 1E-07 43.3 6.1 52 4-58 83-134 (243)
110 2vsy_A XCC0866; transferase, g 96.8 0.0022 7.7E-08 51.4 6.1 58 2-62 47-104 (568)
111 2vq2_A PILW, putative fimbrial 96.8 0.0029 1E-07 42.5 5.8 50 8-60 109-158 (225)
112 3qky_A Outer membrane assembly 96.8 0.0024 8.1E-08 45.6 5.5 58 1-61 38-101 (261)
113 2ho1_A Type 4 fimbrial biogene 96.7 0.0028 9.7E-08 44.0 5.6 57 2-61 95-153 (252)
114 4abn_A Tetratricopeptide repea 96.7 0.012 4.2E-07 46.8 10.0 64 1-64 202-273 (474)
115 1hh8_A P67PHOX, NCF-2, neutrop 96.7 0.0031 1.1E-07 43.0 5.7 45 2-49 61-105 (213)
116 1wao_1 Serine/threonine protei 96.7 0.0028 9.4E-08 51.1 6.2 59 2-63 30-88 (477)
117 1w3b_A UDP-N-acetylglucosamine 96.7 0.0028 9.6E-08 47.3 5.8 56 3-61 58-113 (388)
118 4g1t_A Interferon-induced prot 96.7 0.023 7.7E-07 43.2 10.6 57 2-61 237-293 (472)
119 2v5f_A Prolyl 4-hydroxylase su 96.6 0.0069 2.4E-07 38.8 6.6 48 9-59 43-90 (104)
120 3qou_A Protein YBBN; thioredox 96.6 0.0037 1.3E-07 46.3 6.0 57 2-61 209-267 (287)
121 1kt0_A FKBP51, 51 kDa FK506-bi 96.6 0.0021 7.3E-08 51.2 4.9 60 2-64 292-366 (457)
122 1xnf_A Lipoprotein NLPI; TPR, 96.6 0.0028 9.5E-08 44.3 4.8 53 2-57 101-153 (275)
123 2pzi_A Probable serine/threoni 96.6 0.002 6.7E-08 54.0 4.5 54 2-58 524-577 (681)
124 2yhc_A BAMD, UPF0169 lipoprote 96.5 0.0025 8.6E-08 45.0 4.3 55 2-59 28-88 (225)
125 2ond_A Cleavage stimulation fa 96.5 0.0067 2.3E-07 44.8 6.6 55 2-59 88-144 (308)
126 3qky_A Outer membrane assembly 96.5 0.0036 1.2E-07 44.6 4.7 59 2-63 121-199 (261)
127 3hym_B Cell division cycle pro 96.4 0.0053 1.8E-07 43.7 5.6 54 3-59 150-203 (330)
128 2if4_A ATFKBP42; FKBP-like, al 96.4 0.0019 6.7E-08 49.3 3.4 59 2-63 203-278 (338)
129 1wao_1 Serine/threonine protei 96.4 0.0035 1.2E-07 50.5 4.9 54 2-58 64-117 (477)
130 3u64_A Protein TP_0956; tetrat 96.4 0.003 1E-07 50.2 4.1 57 1-59 186-251 (301)
131 1ihg_A Cyclophilin 40; ppiase 96.4 0.0037 1.3E-07 48.8 4.6 59 2-63 297-355 (370)
132 2xpi_A Anaphase-promoting comp 96.3 0.0043 1.5E-07 48.6 5.0 54 8-64 511-565 (597)
133 3fp2_A TPR repeat-containing p 96.3 0.0058 2E-07 46.9 5.5 55 3-60 301-355 (537)
134 4g1t_A Interferon-induced prot 96.1 0.0019 6.3E-08 49.3 1.5 54 2-55 162-215 (472)
135 2ond_A Cleavage stimulation fa 96.0 0.0088 3E-07 44.1 4.7 54 2-58 123-177 (308)
136 2c2l_A CHIP, carboxy terminus 95.9 0.02 7E-07 42.2 6.5 52 9-63 1-52 (281)
137 2xpi_A Anaphase-promoting comp 95.9 0.016 5.3E-07 45.4 6.0 55 3-60 364-418 (597)
138 2gw1_A Mitochondrial precursor 95.9 0.012 4E-07 44.7 5.1 46 14-62 414-462 (514)
139 2hr2_A Hypothetical protein; a 95.8 0.011 3.8E-07 42.5 4.7 49 13-64 58-117 (159)
140 2r5s_A Uncharacterized protein 95.8 0.0035 1.2E-07 42.5 1.9 45 2-50 30-74 (176)
141 3qou_A Protein YBBN; thioredox 95.8 0.022 7.4E-07 42.1 6.3 51 8-61 113-163 (287)
142 2kc7_A BFR218_protein; tetratr 95.6 0.037 1.3E-06 33.3 5.7 45 16-63 4-49 (99)
143 1pc2_A Mitochondria fission pr 95.5 0.016 5.5E-07 41.6 4.6 60 2-64 59-120 (152)
144 2yhc_A BAMD, UPF0169 lipoprote 95.2 0.023 7.8E-07 40.0 4.5 59 2-63 120-198 (225)
145 2ooe_A Cleavage stimulation fa 95.1 0.035 1.2E-06 43.9 5.6 48 2-53 36-83 (530)
146 3bee_A Putative YFRE protein; 95.0 0.028 9.6E-07 36.0 4.1 45 1-48 32-76 (93)
147 2ooe_A Cleavage stimulation fa 95.0 0.046 1.6E-06 43.2 6.1 56 1-60 2-57 (530)
148 3edt_B KLC 2, kinesin light ch 94.6 0.024 8.2E-07 39.1 3.0 53 8-63 123-183 (283)
149 2hr2_A Hypothetical protein; a 94.5 0.014 4.7E-07 42.0 1.7 40 8-50 94-137 (159)
150 4a1s_A PINS, partner of inscut 94.0 0.044 1.5E-06 40.7 3.6 56 2-60 72-137 (411)
151 1qqe_A Vesicular transport pro 93.9 0.041 1.4E-06 40.3 3.4 57 2-61 142-211 (292)
152 3ro2_A PINS homolog, G-protein 93.9 0.064 2.2E-06 37.5 4.2 56 2-60 29-94 (338)
153 1ouv_A Conserved hypothetical 93.8 0.18 6.3E-06 35.6 6.6 32 9-43 3-34 (273)
154 1qqe_A Vesicular transport pro 93.2 0.064 2.2E-06 39.3 3.3 47 2-51 182-235 (292)
155 3sf4_A G-protein-signaling mod 93.0 0.089 3E-06 38.4 3.8 56 2-60 33-98 (406)
156 3edt_B KLC 2, kinesin light ch 92.9 0.053 1.8E-06 37.3 2.4 51 8-61 81-139 (283)
157 3mkr_A Coatomer subunit epsilo 92.9 0.16 5.5E-06 37.6 5.2 32 30-61 181-212 (291)
158 3nf1_A KLC 1, kinesin light ch 92.7 0.051 1.7E-06 38.2 2.1 41 4-47 270-310 (311)
159 3rjv_A Putative SEL1 repeat pr 92.4 0.18 6E-06 35.3 4.6 52 8-59 81-135 (212)
160 3nf1_A KLC 1, kinesin light ch 91.8 0.25 8.5E-06 34.5 4.8 52 7-61 22-81 (311)
161 3dra_A Protein farnesyltransfe 90.9 1.3 4.4E-05 34.1 8.4 61 2-63 57-117 (306)
162 4a1s_A PINS, partner of inscut 90.8 0.11 3.7E-06 38.5 2.2 54 8-64 122-181 (411)
163 3ly7_A Transcriptional activat 90.7 0.24 8.2E-06 40.1 4.3 41 5-48 270-310 (372)
164 1ouv_A Conserved hypothetical 90.6 0.9 3.1E-05 31.9 6.8 47 9-60 35-85 (273)
165 3ax2_A Mitochondrial import re 90.5 0.34 1.2E-05 30.9 4.0 30 15-47 20-49 (73)
166 1om2_A Protein (mitochondrial 90.5 0.2 6.8E-06 33.6 3.0 30 15-47 23-52 (95)
167 2ifu_A Gamma-SNAP; membrane fu 90.3 0.12 3.9E-06 38.2 1.9 45 12-59 155-205 (307)
168 3ly7_A Transcriptional activat 90.2 0.43 1.5E-05 38.6 5.3 54 8-62 193-246 (372)
169 3gw4_A Uncharacterized protein 90.0 0.49 1.7E-05 31.2 4.7 51 6-59 19-76 (203)
170 3ro2_A PINS homolog, G-protein 89.6 0.47 1.6E-05 33.0 4.5 31 13-46 184-214 (338)
171 3ro3_A PINS homolog, G-protein 88.6 0.82 2.8E-05 28.2 4.7 44 13-59 50-99 (164)
172 3gw4_A Uncharacterized protein 88.4 0.31 1.1E-05 32.2 2.8 50 8-60 62-118 (203)
173 3rjv_A Putative SEL1 repeat pr 87.9 1.1 3.7E-05 31.2 5.5 46 9-56 47-92 (212)
174 3ulq_A Response regulator aspa 87.7 0.34 1.2E-05 36.1 2.9 46 14-62 226-277 (383)
175 3ulq_A Response regulator aspa 87.4 0.67 2.3E-05 34.5 4.4 33 11-46 142-174 (383)
176 1dce_A Protein (RAB geranylger 86.8 0.54 1.9E-05 38.9 3.9 62 2-63 53-121 (567)
177 3u3w_A Transcriptional activat 86.6 0.28 9.6E-06 35.6 1.8 48 12-62 196-249 (293)
178 3q15_A PSP28, response regulat 86.4 1.3 4.5E-05 33.0 5.5 45 14-61 224-273 (378)
179 2qfc_A PLCR protein; TPR, HTH, 85.6 1.7 5.8E-05 31.3 5.6 47 12-61 155-208 (293)
180 3sf4_A G-protein-signaling mod 85.5 8.3 0.00028 27.7 9.9 48 10-60 7-58 (406)
181 3u3w_A Transcriptional activat 85.4 0.58 2E-05 33.8 3.0 46 14-62 157-209 (293)
182 3q7a_A Farnesyltransferase alp 85.1 2.5 8.6E-05 33.4 6.8 59 2-62 78-136 (349)
183 3dra_A Protein farnesyltransfe 84.3 1.1 3.8E-05 34.4 4.3 62 2-63 93-158 (306)
184 3q15_A PSP28, response regulat 83.4 0.7 2.4E-05 34.5 2.7 37 7-46 256-292 (378)
185 1klx_A Cysteine rich protein B 83.0 4.3 0.00015 26.5 6.3 47 10-58 55-102 (138)
186 1dce_A Protein (RAB geranylger 82.5 2.2 7.5E-05 35.2 5.6 58 2-59 168-236 (567)
187 3e4b_A ALGK; tetratricopeptide 82.5 1.5 5.1E-05 34.4 4.5 36 9-44 245-280 (452)
188 4e6h_A MRNA 3'-END-processing 82.5 1.5 5E-05 37.5 4.7 54 2-58 494-549 (679)
189 1hz4_A MALT regulatory protein 82.3 3.3 0.00011 30.3 6.0 36 9-47 132-167 (373)
190 2xm6_A Protein corresponding t 81.7 2.7 9.3E-05 32.6 5.6 42 12-55 328-369 (490)
191 3dss_A Geranylgeranyl transfer 81.6 2.7 9.3E-05 32.9 5.6 59 2-61 98-156 (331)
192 2qfc_A PLCR protein; TPR, HTH, 81.0 4.9 0.00017 28.8 6.5 44 15-61 118-167 (293)
193 2uy1_A Cleavage stimulation fa 80.8 2 6.7E-05 34.7 4.7 52 1-56 202-255 (493)
194 3mv2_B Coatomer subunit epsilo 80.8 8.4 0.00029 30.0 8.2 56 2-60 90-147 (310)
195 3ro3_A PINS homolog, G-protein 78.7 8.7 0.0003 23.3 8.2 31 13-46 10-40 (164)
196 1nzn_A CGI-135 protein, fissio 78.6 1.5 5.1E-05 30.4 2.9 30 19-51 81-110 (126)
197 4e6h_A MRNA 3'-END-processing 76.9 2.6 9E-05 35.9 4.5 55 2-57 90-146 (679)
198 3q7a_A Farnesyltransferase alp 75.8 5.4 0.00018 31.5 5.7 61 2-64 113-174 (349)
199 2xm6_A Protein corresponding t 75.3 3 0.0001 32.4 4.1 47 10-58 361-408 (490)
200 2ifu_A Gamma-SNAP; membrane fu 75.1 0.97 3.3E-05 33.1 1.2 33 13-49 196-228 (307)
201 3u64_A Protein TP_0956; tetrat 74.8 1.4 4.8E-05 34.8 2.1 44 1-47 227-272 (301)
202 4f3v_A ESX-1 secretion system 74.5 2.3 8E-05 32.7 3.3 27 30-56 21-47 (282)
203 3dss_A Geranylgeranyl transfer 73.7 5.6 0.00019 31.1 5.3 62 2-63 54-122 (331)
204 3e4b_A ALGK; tetratricopeptide 73.6 5.6 0.00019 31.0 5.3 39 14-52 178-216 (452)
205 3ffl_A Anaphase-promoting comp 72.5 2.1 7.2E-05 31.1 2.4 30 14-46 65-94 (167)
206 2v5f_A Prolyl 4-hydroxylase su 70.9 16 0.00053 22.5 6.3 51 10-63 3-60 (104)
207 1klx_A Cysteine rich protein B 67.0 9.8 0.00033 24.7 4.7 37 10-46 91-128 (138)
208 1pc2_A Mitochondria fission pr 58.3 43 0.0015 23.4 7.0 64 4-67 24-89 (152)
209 4f3v_A ESX-1 secretion system 54.7 16 0.00056 27.9 4.6 50 13-65 172-224 (282)
210 1hz4_A MALT regulatory protein 54.4 17 0.00058 26.3 4.5 29 15-46 96-124 (373)
211 1y8m_A FIS1; mitochondria, unk 53.4 16 0.00056 25.8 4.1 30 19-51 84-113 (144)
212 3o48_A Mitochondria fission 1 48.6 18 0.00062 25.2 3.6 21 30-50 93-113 (134)
213 1ya0_A SMG-7 transcript varian 46.6 12 0.00043 30.8 2.9 38 3-43 177-214 (497)
214 3qww_A SET and MYND domain-con 42.8 14 0.00047 29.6 2.5 30 13-45 383-412 (433)
215 2wpv_A GET4, UPF0363 protein Y 42.4 24 0.00082 27.5 3.8 28 11-41 133-160 (312)
216 3qww_A SET and MYND domain-con 41.2 49 0.0017 26.3 5.6 35 8-45 333-370 (433)
217 4b4t_Q 26S proteasome regulato 39.2 83 0.0028 22.9 6.2 30 15-47 58-87 (434)
218 3lpz_A GET4 (YOR164C homolog); 39.0 29 0.00098 27.5 3.8 26 11-39 135-160 (336)
219 3n71_A Histone lysine methyltr 38.6 17 0.00059 29.5 2.5 30 13-45 394-423 (490)
220 4h7y_A Dual specificity protei 36.2 51 0.0017 23.8 4.4 33 12-47 94-126 (161)
221 4b4t_R RPN7, 26S proteasome re 35.8 17 0.00058 28.7 2.0 44 14-60 133-179 (429)
222 3n71_A Histone lysine methyltr 32.9 62 0.0021 26.2 5.0 29 14-45 353-381 (490)
223 1ya0_A SMG-7 transcript varian 32.9 89 0.003 25.6 6.0 40 13-55 153-192 (497)
224 4b4t_Q 26S proteasome regulato 32.3 84 0.0029 22.9 5.3 32 12-46 135-166 (434)
225 2rpa_A Katanin P60 ATPase-cont 31.6 34 0.0012 21.6 2.6 29 14-45 14-42 (78)
226 3qwp_A SET and MYND domain-con 29.4 30 0.001 27.3 2.5 28 14-44 373-400 (429)
227 1zbp_A Hypothetical protein VP 27.7 56 0.0019 25.3 3.7 56 2-60 21-78 (273)
228 1b89_A Protein (clathrin heavy 27.7 1.1E+02 0.0036 25.1 5.5 40 15-62 151-190 (449)
229 3mv2_B Coatomer subunit epsilo 26.9 80 0.0028 24.3 4.5 38 16-54 178-219 (310)
230 2vj4_A Protein MXIC, MXIC; sec 25.6 27 0.00093 27.2 1.5 29 30-58 101-129 (294)
231 3qwp_A SET and MYND domain-con 25.5 55 0.0019 25.8 3.4 35 8-45 322-359 (429)
232 2xze_A STAM-binding protein; h 22.9 56 0.0019 22.6 2.6 28 15-45 43-70 (146)
233 3enp_A TP53RK-binding protein; 22.0 50 0.0017 23.6 2.3 22 19-40 79-100 (177)
234 4a5x_A MITD1, MIT domain-conta 21.2 48 0.0017 20.9 1.9 15 30-44 31-45 (86)
235 2ff4_A Probable regulatory pro 21.1 83 0.0028 24.3 3.6 52 3-57 196-255 (388)
236 2cpt_A SKD1 protein, vacuolar 20.8 1.9E+02 0.0065 19.1 5.9 14 30-43 33-46 (117)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.19 E-value=2.3e-06 Score=56.95 Aligned_cols=62 Identities=19% Similarity=0.137 Sum_probs=56.4
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
|+++|-++|.++..|..+|.+++-+| +++.|+.+|.++|+++|++..+++.+-.|-..+.+.
T Consensus 36 ~~~al~~~p~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 36 YNEAVKRDPENAILYSNRAACLTKLM---EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhCCCCHHHHHHHhhHHHhhc---cHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCH
Confidence 35788899999999999999999999 999999999999999999999999998888776543
No 2
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.18 E-value=2.6e-06 Score=56.68 Aligned_cols=59 Identities=15% Similarity=0.185 Sum_probs=51.9
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
+.-++|...-.|...|.++|-.| +++.|+++|.++|+++|++..+++.+-.|-.++.+.
T Consensus 5 ~a~inP~~a~~~~~~G~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 63 (126)
T 4gco_A 5 LAYINPELAQEEKNKGNEYFKKG---DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEF 63 (126)
T ss_dssp --CCCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHCHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccH
Confidence 34578999999999999999999 999999999999999999999999998888776644
No 3
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.18 E-value=2.2e-06 Score=59.85 Aligned_cols=55 Identities=15% Similarity=0.079 Sum_probs=30.4
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
.++-.+|.++.++..+|.+++..| +++.|+.+|.++++++|++..++|.+-.|-.
T Consensus 61 ~al~~~P~~~~~~~~lg~~~~~~g---~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 61 FLCIYDFYNVDYIMGLAAIYQIKE---QFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHc---cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 344455555555555555555555 5555555555555555555555555554443
No 4
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.18 E-value=3.2e-06 Score=57.40 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=34.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+++|-++|+++..|..+|.+++..| +++.|+.+|.++++++|++..+++.+-.+..
T Consensus 55 ~~al~~~p~~~~a~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 110 (150)
T 4ga2_A 55 CTYINVQERDPKAHRFLGLLYELEE---NTDKAVECYRRSVELNPTQKDLVLKIAELLC 110 (150)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---chHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3455566666666666666666666 6666666666666666666666665554443
No 5
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.13 E-value=4.3e-06 Score=53.78 Aligned_cols=60 Identities=20% Similarity=0.077 Sum_probs=53.5
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++++-.+|.++..+..+|.+++..| +++.|+.+|.++++++|++..+++.+-.+...+.
T Consensus 27 ~~~al~~~p~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~ 86 (126)
T 3upv_A 27 YTEMIKRAPEDARGYSNRAAALAKLM---SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK 86 (126)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh
Confidence 35678889999999999999999999 9999999999999999999999999888765443
No 6
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.11 E-value=1.2e-05 Score=53.41 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=35.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
++++-.+|.++.++..+|.+++..| +++.|+++|.++++++|++..++|.+-.|..
T Consensus 42 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 97 (142)
T 2xcb_A 42 QALCMLDHYDARYFLGLGACRQSLG---LYEQALQSYSYGALMDINEPRFPFHAAECHL 97 (142)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHHh---hHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence 3455566666666666666666666 6666666666666666666666666555544
No 7
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.11 E-value=6.8e-06 Score=54.14 Aligned_cols=59 Identities=20% Similarity=0.089 Sum_probs=49.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+.++-.+|.++..+..+|.++...| +++.|+.+|.++++++|++..+++.+-.+-.+..
T Consensus 41 ~~al~~~P~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 41 EAVCQKEPEREEAWRSLGLTQAENE---KDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 5677788999999999999999888 8899999999999999999999888877765443
No 8
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.10 E-value=9.8e-06 Score=50.08 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=37.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc------hHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN------IRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~------lRalyGL~l~~~~l 62 (111)
++++-.+|.++..+..+|.+++.+| +++.|+++|.++++++|++ ..++|.+-.+...+
T Consensus 28 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~ 91 (111)
T 2l6j_A 28 DQLITAQPQNPVGYSNKAMALIKLG---EYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAV 91 (111)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777777777777766 6677777777777777766 56666555554443
No 9
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.05 E-value=1.2e-05 Score=48.14 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
|.+...+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....
T Consensus 6 ~~~~~~~~~la~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 57 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 57 (91)
T ss_dssp CHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 345667777888888777 7888888888888888888888777766665443
No 10
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.03 E-value=1.3e-05 Score=51.02 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=53.5
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++++-.+|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.....
T Consensus 8 ~~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 8 LEAMLAQGTDNMLLRFTLGKTYAEHE---QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 35678889999999999999999999 9999999999999999999999998877765443
No 11
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.98 E-value=1.1e-05 Score=54.37 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=54.4
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+++++-++|.++.++..+|.+++..| +++.|+.+|.++++++|++..++|.+-.+...+.+
T Consensus 34 ~~~al~~~p~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 94 (164)
T 3sz7_A 34 YTQALSIAPANPIYLSNRAAAYSASG---QHEKAAEDAELATVVDPKYSKAWSRLGLARFDMAD 94 (164)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC
Confidence 35678889999999999999999999 99999999999999999999999998888765543
No 12
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=1.1e-05 Score=52.47 Aligned_cols=53 Identities=17% Similarity=-0.028 Sum_probs=46.8
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
.+|.|+-.+..+|+++|..+|....+.|+++|.++++++|+++||++.+-...
T Consensus 1 ~~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~ 53 (93)
T 3bee_A 1 SNAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDH 53 (93)
T ss_dssp -CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHH
Confidence 37999999999999999888766689999999999999999999999885443
No 13
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.96 E-value=1.2e-05 Score=54.66 Aligned_cols=55 Identities=15% Similarity=0.094 Sum_probs=35.4
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+++-.+|.++.++..+|.+++..| +++.|+++|.++++++|++.+++|.+-.|..
T Consensus 46 ~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 100 (148)
T 2vgx_A 46 ALCVLDHYDSRFFLGLGACRQAMG---QYDLAIHSYSYGAVMDIXEPRFPFHAAECLL 100 (148)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH
T ss_pred HHHHcCcccHHHHHHHHHHHHHHh---hHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 445566666666666666666666 6666666666666666666666666555543
No 14
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.95 E-value=1.1e-05 Score=56.24 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=56.1
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+++++-++|.++..+..+|.+++-.| +++.|.++|.++++++|++..+|+++-.|...+.+
T Consensus 25 l~~al~l~p~~~~~~~~lg~~~~~~g---~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~ 85 (151)
T 3gyz_A 25 LKDINAIPDDMMDDIYSYAYDFYNKG---RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQ 85 (151)
T ss_dssp TGGGCCSCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcc
Confidence 46789999999999999999999999 99999999999999999999999999888876543
No 15
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.95 E-value=1.5e-05 Score=51.11 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=45.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.++..+..+|.+++..| +++.|+++|.++++++|++.++++.+-.+...+
T Consensus 33 ~~al~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 33 GRAITRNPLVAVYYTNRALCYLKMQ---QPEQALADCRRALELDGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhhCcCcHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 4566778888888888888888887 788888888888888888888888877766543
No 16
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.93 E-value=2.4e-05 Score=49.58 Aligned_cols=54 Identities=11% Similarity=0.160 Sum_probs=47.0
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
.+|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.|...+.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 55 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHD---NASRALALFEELVETDPDYVGTYYHLGKLYERLD 55 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 47999999999999999999 9999999999999999999999999887765443
No 17
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.91 E-value=1.4e-05 Score=56.60 Aligned_cols=56 Identities=21% Similarity=0.206 Sum_probs=51.3
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++++-.+|.++..+..+|.+++..| +++.|+.+|.++++++|++..+++.+-.+-
T Consensus 77 ~~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 77 YKELLQKAPNNVDCLEACAEMQVCRG---QEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 35678899999999999999999999 999999999999999999999999887664
No 18
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.84 E-value=1.7e-05 Score=48.84 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=42.3
Q ss_pred ccchhcCCCCHH-HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHH
Q psy14212 2 EELFLHHPHNHL-LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALY 53 (111)
Q Consensus 2 EEvlL~~P~n~~-~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRaly 53 (111)
++++-.+|.++. .+..+|.+++..| +++.|+++|.++++++|++..+++
T Consensus 24 ~~al~~~p~~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~ 73 (99)
T 2kc7_A 24 EEFLQTEPVGKDEAYYLMGNAYRKLG---DWQKALNNYQSAIELNPDSPALQA 73 (99)
T ss_dssp HHHHHHCSSTHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTSTHHHH
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCcHHHHH
Confidence 456778899988 8999999999888 889999999999999998888773
No 19
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.84 E-value=4.4e-05 Score=47.31 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=51.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.....+
T Consensus 36 ~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (131)
T 2vyi_A 36 GKAIELNPANAVYFCNRAAAYSKLG---NYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNK 95 (131)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhh---chHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCC
Confidence 4567788999999999999999988 89999999999999999999999888777665543
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.80 E-value=4.4e-05 Score=47.90 Aligned_cols=60 Identities=17% Similarity=0.122 Sum_probs=53.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+...+.+
T Consensus 40 ~~al~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~ 99 (133)
T 2lni_A 40 TEAIKRNPKDAKLYSNRAACYTKLL---EFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKD 99 (133)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHTTTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhh
Confidence 5677889999999999999999888 89999999999999999999999998887766543
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.80 E-value=3e-05 Score=51.45 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=53.5
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++++-.+|.+...+..+|.+++..| +++.|+++|.++++++|++..+|+++-.|..+..
T Consensus 7 l~~al~~~p~~~~~~~~~a~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 66 (142)
T 2xcb_A 7 LAMLRGLSEDTLEQLYALGFNQYQAG---KWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG 66 (142)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh
Confidence 46788899999999999999999999 9999999999999999999999999988876543
No 22
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.79 E-value=4.5e-05 Score=46.57 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=52.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
++++-..|.++..+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....+
T Consensus 28 ~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 87 (118)
T 1elw_A 28 SEAIKLDPHNHVLYSNRSAAYAKKG---DYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNR 87 (118)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCcHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhh
Confidence 5677789999999999999999998 89999999999999999999999988877765443
No 23
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.79 E-value=1.9e-05 Score=50.79 Aligned_cols=59 Identities=8% Similarity=-0.120 Sum_probs=51.8
Q ss_pred ccchhc---CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLH---HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~---~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-. +|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.|..++.
T Consensus 14 ~~al~~~~~~p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 75 (117)
T 3k9i_A 14 EKAIASGLQGKDLAECYLGLGSTFRTLG---EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG 75 (117)
T ss_dssp HHHHSSCCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCccHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC
Confidence 455666 5999999999999999999 9999999999999999999999998887776544
No 24
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.79 E-value=8.4e-06 Score=55.31 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=52.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+.++-.+|.++..+..+|.+++-+| +++.|+++|.++|+++|++..+++.+-.|-..+.+
T Consensus 21 ~~a~~~~p~~~~~~~~la~~y~~~~---~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 21 QGSTPSPRQKSIKGFYFAKLYYEAK---EYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp HHHSCSHHHHHTTHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhcccCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 3456677888889999999999999 99999999999999999999999999888776543
No 25
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.72 E-value=5.5e-05 Score=51.08 Aligned_cols=57 Identities=16% Similarity=0.140 Sum_probs=49.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+-.+
T Consensus 97 ~~a~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 97 QRAIALNTVYADAYYKLGLVYDSMG---EHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCccchHHHHHHHHHHHHhC---CchhHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence 4567788999999999999999998 89999999999999999999999988776553
No 26
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.71 E-value=2.8e-05 Score=56.36 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=51.0
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcC--------CcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQG--------GLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~G--------g~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
||++|-++|.++-.+-.+|-+++..| +.++++.|+++|-+||+++|++.-....+.++-.
T Consensus 69 le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 69 FEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAK 136 (158)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred HHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 47889999999999999999999987 2358999999999999999999766666665543
No 27
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.71 E-value=8e-05 Score=45.16 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
+|.++..+..+|.+++..| +++.|..+|.++++++|++.++++++-.+....
T Consensus 2 ~p~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~ 53 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAG---NYTESIDLFEKAIQLDPEESKYWLMKGKALYNL 53 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSC---CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc
Confidence 5666677777777777776 777777777777777777777777666655443
No 28
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.70 E-value=4.8e-05 Score=51.19 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHH--HhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRAL--YGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRal--yGL~l~~~~l~~ 64 (111)
+.++-++|.++..+..+|.+++..| +++.|+++|.++++++|++..++ -|+..+-.++..
T Consensus 69 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~ 130 (164)
T 3sz7_A 69 ELATVVDPKYSKAWSRLGLARFDMA---DYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEE 130 (164)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999 99999999999999999988755 445555555543
No 29
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.70 E-value=0.00083 Score=46.79 Aligned_cols=61 Identities=25% Similarity=0.252 Sum_probs=49.9
Q ss_pred CccchhcCCCCHHH-------HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC--chHHHHhHHHHHHHHHh
Q psy14212 1 MEELFLHHPHNHLL-------HQRYADILYTQGGLENIELAISHYLMAINLNEK--NIRALYGLALSCHQVLT 64 (111)
Q Consensus 1 ~EEvlL~~P~n~~~-------h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~--~lRalyGL~l~~~~l~~ 64 (111)
+++++-..|.++.+ +..+|.+++..| +++.|+.+|.++++++|+ +..+++.+-.+......
T Consensus 99 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~ 168 (228)
T 4i17_A 99 LTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAG---NIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGA 168 (228)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhc---cHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHH
Confidence 35678899999955 666666666666 999999999999999999 99999999888765443
No 30
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.68 E-value=4.8e-05 Score=48.75 Aligned_cols=57 Identities=11% Similarity=-0.095 Sum_probs=50.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC------CCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLN------EKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~------~~~lRalyGL~l~~~~ 61 (111)
+.++-++|.++..+..+|.+++..| +++.|+.+|.++++++ |++..++..+..|-.+
T Consensus 62 ~~al~~~p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 62 NKAIEKDPNFVRAYIRKATAQIAVK---EYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 5678899999999999999999999 9999999999999999 8888888777766543
No 31
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.68 E-value=0.0001 Score=49.47 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=50.3
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 6 LHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 6 L~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
..+|.+...|..+|.+++.+| +++.|+.+|.++|+++|++..++|.+-.+...+.+.
T Consensus 57 ~~~~~~~~~~~nla~~~~~~~---~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~ 113 (162)
T 3rkv_A 57 ELDRKNIPLYANMSQCYLNIG---DLHEAEETSSEVLKREETNEKALFRRAKARIAAWKL 113 (162)
T ss_dssp HHHHTHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcH
Confidence 457889999999999999999 999999999999999999999999998887765543
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.66 E-value=1.2e-05 Score=54.47 Aligned_cols=47 Identities=17% Similarity=0.085 Sum_probs=43.3
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR 50 (111)
+++++-.+|.++..+..+|.+++-+| +++.|+++|.+||+++|++.+
T Consensus 130 ~~~~l~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 130 YEKTISIKPGFIRAYQSIGLAYEGKG---LRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHhcchhhhHHHHHHHHHHHCC---CHHHHHHHHHHHHhCCccCHH
Confidence 35678899999999999999999999 999999999999999998865
No 33
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.66 E-value=8.8e-05 Score=45.23 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
...+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....+
T Consensus 4 ~~~~~~~~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 53 (118)
T 1elw_A 4 VNELKEKGNKALSVG---NIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGD 53 (118)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhcc
Confidence 345678899999988 99999999999999999999999988887766543
No 34
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.65 E-value=0.00013 Score=44.77 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=51.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.....
T Consensus 33 ~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 91 (125)
T 1na0_A 33 QKALELDPNNAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 91 (125)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCcCcHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc
Confidence 5667788999999999999999998 8999999999999999999999988877766544
No 35
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.62 E-value=4.7e-05 Score=51.67 Aligned_cols=59 Identities=17% Similarity=0.025 Sum_probs=53.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+.++-++|.+...+..+|.+++..| +++.|..+|.++++++|++..+|+++-.|...+.
T Consensus 11 ~~al~~~p~~~~~~~~~g~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 69 (148)
T 2vgx_A 11 AMLNEISSDTLEQLYSLAFNQYQSG---XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG 69 (148)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHhhHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh
Confidence 4577889999999999999999999 9999999999999999999999999988876544
No 36
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.62 E-value=0.00012 Score=51.95 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=51.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.++..+..+|.+++..| +++.|..+|.++++++|++..+++.+-.+....
T Consensus 29 ~~al~~~p~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 29 ERALKENPQDPEALYWLARTQLKLG---LVNPALENGKTLVARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHTTSSSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 5678889999999999999999999 899999999999999999999988887776655
No 37
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.61 E-value=0.00011 Score=46.03 Aligned_cols=53 Identities=21% Similarity=0.314 Sum_probs=46.6
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
..|.+..-+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 63 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKG---DYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL 63 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTT---CSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTT
T ss_pred cCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 46788888999999999999 899999999999999999999999888876543
No 38
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.60 E-value=3.9e-05 Score=50.72 Aligned_cols=50 Identities=24% Similarity=0.252 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
...|..+|.++|-.| +++.|+.+|.+||+++|++..+++++-.|-..+.+
T Consensus 8 A~a~~~lG~~~~~~~---~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~ 57 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQK---DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKK 57 (127)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhh
Confidence 345667788888887 78888888888888888888888877777665543
No 39
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.60 E-value=0.00016 Score=52.11 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=40.4
Q ss_pred ccchhcCCCCHHH----HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLL----HQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~----h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.++.+ +..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 320 (359)
T 3ieg_A 258 ESVMKTEPSVAEYTVRSKERICHCFSKDE---KPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEE 320 (359)
T ss_dssp HHHHHHCCSSHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCchHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC
Confidence 4556667777644 445777777777 7777777777777777777777777666655433
No 40
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.58 E-value=0.00016 Score=46.24 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=26.9
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc---hHHHHhHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN---IRALYGLALSCH 60 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~---lRalyGL~l~~~ 60 (111)
..|.+...+..+|.+++..| +++.|.++|.++++++|++ ..+++.+-.+..
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~ 76 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCG---DYGGALAAYTQALGLDATPQDQAVLHRNRAACHL 76 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTT---CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 34555555555555555555 5555555555555555554 455555444443
No 41
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.57 E-value=0.00015 Score=50.09 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
.+..+|.+++..| +++.|+++|.++++++|++.+++|.+-.+...
T Consensus 90 ~~~~la~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 134 (198)
T 2fbn_A 90 CNLNLATCYNKNK---DYPKAIDHASKVLKIDKNNVKALYKLGVANMY 134 (198)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 3344455555444 44555555555555555555555544444433
No 42
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.54 E-value=0.00017 Score=44.56 Aligned_cols=54 Identities=19% Similarity=0.100 Sum_probs=47.2
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
..|.+...+..+|.+++..| +++.|..+|.++++++|++..+++.+-.+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 60 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVE---NFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLG 60 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cchhhhHHHHHHHHHHHHcc---CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh
Confidence 45778888999999999998 9999999999999999999999998888776543
No 43
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.54 E-value=0.00016 Score=47.12 Aligned_cols=59 Identities=19% Similarity=0.145 Sum_probs=50.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++++-.+..++.
T Consensus 37 ~~al~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~ 95 (166)
T 1a17_A 37 SQAIELNPSNAIYYGNRSLAYLRTE---CYGYALGDATRAIELDKKYIKGYYRRAASNMALG 95 (166)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCChHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc
Confidence 4567788999999999999999888 8999999999999999999999988877765543
No 44
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.52 E-value=0.00012 Score=49.40 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=47.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
++++-.+|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+
T Consensus 34 ~~al~~~p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 34 QDKIRANPQNSEQWALLGEYYLWQN---DYSNSLLAYRQALQLRGENAELYAALATV 87 (177)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4567788999999999999999998 89999999999999999998888877766
No 45
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=0.00016 Score=46.22 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=54.5
Q ss_pred CccchhcCCCC---HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 1 MEELFLHHPHN---HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 1 ~EEvlL~~P~n---~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
+++++-..|.+ +..+..+|.+++..| +++.|+++|.++++++|++..++|.+-.+...+.+.
T Consensus 51 ~~~a~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 115 (148)
T 2dba_A 51 YTQALGLDATPQDQAVLHRNRAACHLKLE---DYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRL 115 (148)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCH
Confidence 35678889988 899999999999998 999999999999999999999999988887766543
No 46
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.50 E-value=0.00019 Score=54.89 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=51.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+.+|-++|.+...+.++|.+++-+| +++.|+.+|.++++++|++..+++.+-.+...+.+
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVN---DFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999988 89999999999999999999998888877765553
No 47
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.49 E-value=0.00015 Score=45.85 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=48.4
Q ss_pred ccchhcCCCCH---HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc---hHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNH---LLHQRYADILYTQGGLENIELAISHYLMAINLNEKN---IRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~---~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~---lRalyGL~l~~~~ 61 (111)
++++-..|.++ ..+..+|.+++..| +++.|+++|.+++++.|++ ..++|.+-.|-..
T Consensus 26 ~~~~~~~p~~~~~~~~~~~lg~~~~~~~---~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~ 88 (129)
T 2xev_A 26 LSFLELYPNGVYTPNALYWLGESYYATR---NFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG 88 (129)
T ss_dssp HHHHHHCSSSTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcccHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH
Confidence 45667789888 68889999999999 9999999999999999998 7888887766553
No 48
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.48 E-value=7.9e-05 Score=49.98 Aligned_cols=58 Identities=9% Similarity=0.019 Sum_probs=48.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHH-HHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRA-LYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRa-lyGL~l~~~~l 62 (111)
+.+|-++|.++..|.++|.+++..| +++.|+.+|.++++++|++..+ .-.|..+-..+
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g---~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAW---KLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHh---cHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999 9999999999999999998844 33444444433
No 49
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.47 E-value=0.00026 Score=46.61 Aligned_cols=60 Identities=8% Similarity=0.089 Sum_probs=51.0
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
|+++|-++|.++.++..+|.+++.+| +++.|+++|.++|+++|++..++..+..+-.++.
T Consensus 31 y~~Al~~~p~~~~~~~nlg~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 31 YDKAIELDPSNITFYNNKAAVYFEEK---KFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHhHHHHHHHhh---hHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 35678899999999999999999999 9999999999999999988777766655544444
No 50
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.45 E-value=0.00031 Score=45.70 Aligned_cols=54 Identities=11% Similarity=0.007 Sum_probs=47.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..++..+.++
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALG---KFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4567789999999999999999999 99999999999999999998888554444
No 51
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.45 E-value=0.00012 Score=51.69 Aligned_cols=59 Identities=12% Similarity=-0.071 Sum_probs=51.8
Q ss_pred ccchhcCCCCHHHHHH----------------HHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQR----------------YADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~r----------------lAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-.+|.++..+.. +|.+++..| +++.|+.+|.++++++|++..+++.+-.+-....
T Consensus 28 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 102 (208)
T 3urz_A 28 RQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR---NYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRG 102 (208)
T ss_dssp HHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC
Confidence 4667788988888877 999999999 9999999999999999999999999887766544
No 52
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.43 E-value=0.00036 Score=42.71 Aligned_cols=53 Identities=26% Similarity=0.344 Sum_probs=44.0
Q ss_pred CCCC-HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 8 HPHN-HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 8 ~P~n-~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+|.+ ...+..+|.+++..| +++.|+++|.++++.+|++..+++.+-.+.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 57 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 57 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CccccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC
Confidence 5655 778889999999998 9999999999999999999999998887766543
No 53
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.00025 Score=48.93 Aligned_cols=54 Identities=20% Similarity=0.094 Sum_probs=30.4
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++-..|.++..+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.
T Consensus 164 ~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 217 (258)
T 3uq3_A 164 EMIKRAPEDARGYSNRAAALAKLM---SFPEAIADCNKAIEKDPNFVRAYIRKATAQ 217 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhcCcccHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 444455555555555565555555 555566666666666665555555544443
No 54
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.40 E-value=0.00015 Score=43.86 Aligned_cols=58 Identities=21% Similarity=0.173 Sum_probs=51.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC--chHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEK--NIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~--~lRalyGL~l~~~~l 62 (111)
+.++-..|.+...+..+|.+++..| +++.|+++|.++++++|+ +..+++.+-.+..++
T Consensus 30 ~~a~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 30 EKAIQLDPEESKYWLMKGKALYNLE---RYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI 89 (112)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence 4567789999999999999999999 899999999999999999 999999887776533
No 55
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.39 E-value=0.00025 Score=49.69 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=47.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++++-.+....
T Consensus 67 ~~al~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 67 SQALAIRPDMPEVFNYLGIYLTQAG---NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh
Confidence 4566778888888888898888888 888899999999999888888888887766543
No 56
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.38 E-value=0.00016 Score=44.84 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=32.2
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc-------hHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN-------IRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~-------lRalyGL~l~~ 59 (111)
+++-..|.++..+..+|.+++..| +++.|..+|.+++++.|++ .++++.+-.+.
T Consensus 29 ~a~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 29 KAKELDPTNMTYITNQAAVYFEKG---DYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSY 89 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHhc---cHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Confidence 444556666666666666666666 6666666666666666654 55555544443
No 57
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.38 E-value=0.00027 Score=54.48 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=54.7
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++++-.+|+++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+...+.
T Consensus 48 ~~~al~~~p~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 107 (537)
T 3fp2_A 48 YQYAIELDPNEPVFYSNISACYISTG---DLEKVIEFTTKALEIKPDHSKALLRRASANESLG 107 (537)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhhCCCCcHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcC
Confidence 35778899999999999999999999 9999999999999999999999999988876554
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.37 E-value=0.00033 Score=48.35 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=54.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+.++-++|.+...+.++|.+++..| +++.|+++|.++++++|++..++..+..|...+..
T Consensus 112 ~~al~~~p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 112 SKVLKIDKNNVKALYKLGVANMYFG---FLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999999 99999999999999999999999998888776654
No 59
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.35 E-value=0.00023 Score=51.50 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=54.1
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCc-------ccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGL-------ENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~-------enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+.++-++|.+.-.+..+|.++...|+. +.++.|+..|-+||+++|++..|+|.+=.+-..+.
T Consensus 26 ~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 26 ENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 567889999999999999999988743 25779999999999999999999999888877654
No 60
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.32 E-value=0.00038 Score=51.69 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=51.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.++.++..+|.+++..| +++.|.++|.++++++|++..++|.+-.+-..+
T Consensus 28 ~~al~~~p~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 28 GRAITRNPLVAVYYTNRALCYLKMQ---QPEQALADCRRALELDGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 5677789999999999999999999 999999999999999999999999887766543
No 61
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.31 E-value=0.00038 Score=48.53 Aligned_cols=56 Identities=13% Similarity=0.033 Sum_probs=35.8
Q ss_pred cchhcCC-CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 3 ELFLHHP-HNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 3 EvlL~~P-~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
+++-.+| .++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+-..
T Consensus 32 ~al~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 88 (228)
T 4i17_A 32 EYLKLTNNQDSVTAYNCGVCADNIK---KYKEAADYFDIAIKKNYNLANAYIGKSAAYRD 88 (228)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCcHHHHHHHHHHHHhh---cHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 4455565 66666666677766666 66677777777777777666666666555443
No 62
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.30 E-value=0.00034 Score=55.86 Aligned_cols=60 Identities=12% Similarity=0.084 Sum_probs=49.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+++|-++|.+...+.++|.+++.+| +++.|+++|.++++++|++..+++.+..+-.++.+
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g---~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMN---EFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 5678889999999999999999998 89999999999999999999999888887776654
No 63
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.29 E-value=0.00061 Score=46.37 Aligned_cols=55 Identities=15% Similarity=-0.009 Sum_probs=31.4
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc--hHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN--IRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~--lRalyGL~l~~~ 60 (111)
.++-.+|.++-.|..+|.++...| +++.|+.+|.++++++|++ ..+++.+..+..
T Consensus 99 ~al~~~P~~~~~~~~la~~~~~~g---~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~ 155 (176)
T 2r5s_A 99 QELAANPDNFELACELAVQYNQVG---RDEEALELLWNILKVNLGAQDGEVKKTFMDILS 155 (176)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHhCcccChHHHHHHHHHHHH
Confidence 344556666666666666666666 5666666666666666543 335555544433
No 64
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.27 E-value=0.00023 Score=50.90 Aligned_cols=53 Identities=9% Similarity=-0.033 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.....+
T Consensus 233 ~~~~~~~~~la~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 285 (330)
T 3hym_B 233 DKWEPLLNNLGHVCRKLK---KYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN 285 (330)
T ss_dssp TTCCHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc
Confidence 555566667777777776 67777777777777777777777777666655543
No 65
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.26 E-value=0.0002 Score=56.73 Aligned_cols=49 Identities=12% Similarity=0.050 Sum_probs=19.0
Q ss_pred hhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHH
Q psy14212 5 FLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLA 56 (111)
Q Consensus 5 lL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~ 56 (111)
|.++|.++..+..+|.++..+| +++.|+..|.++|+++|+|..+|+.+-
T Consensus 159 l~l~P~~~~a~~~~g~~~~~~g---~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 159 IEEQPKNYQVWHHRRVLVEWLR---DPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHT---CCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 3333333333333333333333 333333334444444443333333333
No 66
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.25 E-value=0.00091 Score=42.56 Aligned_cols=54 Identities=15% Similarity=0.006 Sum_probs=47.7
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
.+|.+...+..+|.+++..| +++.|..+|.++++++|++..+++.+-.|...+.
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 57 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGR---KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ 57 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CccccHHHHHHHHHHHHHhC---cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhc
Confidence 46889999999999999999 9999999999999999999999999988876543
No 67
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.25 E-value=0.00034 Score=49.60 Aligned_cols=57 Identities=16% Similarity=0.034 Sum_probs=48.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhc-----------CCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQ-----------GGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~-----------Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
+.++-++|.++..+..+|.++... | +++.|+..|.++++++|++..+++.+-.+-..
T Consensus 63 ~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g---~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~ 130 (217)
T 2pl2_A 63 KTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKG---YLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 130 (217)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHH---HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhccccc---CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 566778999999999999999988 7 89999999999999999999888877666543
No 68
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.24 E-value=0.00056 Score=50.60 Aligned_cols=58 Identities=24% Similarity=0.378 Sum_probs=37.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..+.
T Consensus 237 ~~al~~~p~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 237 NAALTVRPEDYSLWNRLGATLANGD---RSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 3455566666666666666666666 666677777777776666666666665555443
No 69
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.23 E-value=0.0007 Score=44.04 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=48.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.++..+..+|.+++..| +++.|.++|.++++++|++.++++.+-.+.....
T Consensus 66 ~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 124 (186)
T 3as5_A 66 ERSLADAPDNVKVATVLGLTYVQVQ---KYDLAVPLLIKVAEANPINFNVRFRLGVALDNLG 124 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcC
Confidence 4566778999999999999999888 8899999999999999988888888777665543
No 70
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.22 E-value=0.00038 Score=46.80 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=49.3
Q ss_pred ccchhcCCCCHHHHHHHHHH-HHhcCCcccH--HHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADI-LYTQGGLENI--ELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi-~Yt~Gg~enl--~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
++++-.+|.++..+..+|.+ ++..| ++ +.|+++|.++++++|++..+++.+-.+...
T Consensus 68 ~~al~~~p~~~~~~~~la~~l~~~~~---~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 127 (177)
T 2e2e_A 68 RQALQLRGENAELYAALATVLYYQAS---QHMTAQTRAMIDKALALDSNEITALMLLASDAFM 127 (177)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHTT---TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 56778899999999999999 55666 66 999999999999999999999988776654
No 71
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.22 E-value=0.0013 Score=56.43 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=49.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+.+|-++|.+...|..+|.+++.+| +++.|+.+|.+||+++|++..+++++-.+...+.
T Consensus 33 ~kAl~l~P~~~~a~~nLg~~l~~~g---~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g 91 (723)
T 4gyw_A 33 RKALEVFPEFAAAHSNLASVLQQQG---KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 91 (723)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 5677888999999999999999888 8899999999999999999999888877765543
No 72
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.21 E-value=0.00069 Score=41.56 Aligned_cols=56 Identities=21% Similarity=0.335 Sum_probs=47.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..
T Consensus 25 ~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 25 QKALELDPRSAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCcchhHHHHHHHHHHHhc---CHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 4566678999999999999999888 8999999999999999999888887765543
No 73
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.19 E-value=0.00072 Score=41.46 Aligned_cols=55 Identities=22% Similarity=0.354 Sum_probs=47.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
++++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+..+.
T Consensus 59 ~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 113 (136)
T 2fo7_A 59 QKALELDPRSAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPRSAEAWYNLGNAY 113 (136)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHCCCchHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 4566778999999999999999998 899999999999999999988887765443
No 74
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.16 E-value=0.00068 Score=46.34 Aligned_cols=46 Identities=11% Similarity=0.048 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 11 NHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 11 n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
++..+..+|.+++..| +++.|+++|.++++++|++..+++++-.+.
T Consensus 36 ~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~lg~~~ 81 (213)
T 1hh8_A 36 HSRICFNIGCMYTILK---NMTEAEKAFTRSINRDKHLAVAYFQRGMLY 81 (213)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 3444455555555555 555555555555555555555555444443
No 75
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.16 E-value=0.0011 Score=39.17 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=50.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+-.
T Consensus 33 ~~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 33 QKALELDPNNAEAWYNLGNAYYKQG---DYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHh---hHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 4667789999999999999999999 9999999999999999999999988766543
No 76
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.15 E-value=0.00077 Score=48.42 Aligned_cols=59 Identities=15% Similarity=0.053 Sum_probs=51.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.++..+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....
T Consensus 27 ~~~l~~~p~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (359)
T 3ieg_A 27 HAAVDGDPDNYIAYYRRATVFLAMG---KSKAALPDLTKVIALKMDFTAARLQRGHLLLKQG 85 (359)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCcccHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcC
Confidence 5677789999999999999999998 8999999999999999999999988887776544
No 77
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.14 E-value=0.0007 Score=53.57 Aligned_cols=60 Identities=8% Similarity=-0.022 Sum_probs=53.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCccc-HHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLEN-IELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~en-l~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+.+|-++|.+...+..+|.+++..| + ++.|++.|.++|+++|++..+|+.+-.+...+.+
T Consensus 121 ~~al~l~P~~~~a~~~~g~~l~~~g---~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~ 181 (382)
T 2h6f_A 121 RDAIELNAANYTVWHFRRVLLKSLQ---KDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD 181 (382)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhCccCHHHHHHHHHHHHHcc---cCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC
Confidence 5678899999999999999999998 6 9999999999999999999999998888776543
No 78
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.11 E-value=0.00047 Score=48.51 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=34.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.++..+..+|.+.|..+ +++.|.++|.++++++|++..+++.+-.+...+
T Consensus 132 ~~al~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 189 (272)
T 3u4t_A 132 EKQIRPTTTDPKVFYELGQAYYYNK---EYVKADSSFVKVLELKPNIYIGYLWRARANAAQ 189 (272)
T ss_dssp GGGCCSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCcHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 3455556666666666665555554 666666666666666666666666655555444
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.09 E-value=0.00089 Score=49.49 Aligned_cols=58 Identities=24% Similarity=0.242 Sum_probs=51.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+....
T Consensus 89 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 146 (365)
T 4eqf_A 89 EAAILQDPGDAEAWQFLGITQAENE---NEQAAIVALQRCLELQPNNLKALMALAVSYTNT 146 (365)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcc
Confidence 5677789999999999999999999 899999999999999999999999887776543
No 80
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.07 E-value=0.0018 Score=42.06 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=51.0
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-..|.++..+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+....
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 89 (186)
T 3as5_A 32 EQVYDADAFDVDVALHLGIAYVKTG---AVDRGTELLERSLADAPDNVKVATVLGLTYVQV 89 (186)
T ss_dssp TTTCCTTSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCccChHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 5677789999999999999999998 899999999999999999999988876665443
No 81
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.06 E-value=0.0012 Score=48.39 Aligned_cols=58 Identities=24% Similarity=0.181 Sum_probs=49.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+....
T Consensus 88 ~~al~~~p~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 88 EAAVQQDPKHMEAWQYLGTTQAENE---QELLAISALRRCLELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHCc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 4667788999999999999999988 899999999999999999999988887776543
No 82
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.05 E-value=0.0011 Score=48.44 Aligned_cols=55 Identities=27% Similarity=0.424 Sum_probs=29.1
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+++-..|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..
T Consensus 242 ~al~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 242 AALSVRPNDYLLWNKLGATLANGN---QSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhCcCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 344445555555555555555555 5555555555555555555555555444443
No 83
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.05 E-value=0.00083 Score=51.28 Aligned_cols=59 Identities=15% Similarity=0.034 Sum_probs=52.3
Q ss_pred ccchhcCCCC---------------HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHN---------------HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n---------------~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-++|.+ ...+..+|.+++-+| +++.|+.+|.++++++|++..++|.+-.+...+.
T Consensus 171 ~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 171 KKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ---AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN 244 (336)
T ss_dssp HHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 4667788888 689999999999999 9999999999999999999999999888776544
No 84
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.04 E-value=0.00088 Score=50.07 Aligned_cols=59 Identities=25% Similarity=0.153 Sum_probs=49.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.+...+..+|.++...| +++.|+++|.++++++|++..+++.+-.+..+..
T Consensus 295 ~~al~~~p~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 353 (388)
T 1w3b_A 295 NTALRLCPTHADSLNNLANIKREQG---NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTT---CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHhhCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 5667788999999999999999888 8899999999999999999888888877655443
No 85
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.03 E-value=0.0019 Score=45.28 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=48.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLA 56 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~ 56 (111)
+.++-.+|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-
T Consensus 98 ~~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 98 QAAVDRDTTRLDMYGQIGSYFYNKG---NFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHSTTCTHHHHHHHHHHHHTT---CHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHHHHcc---CHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 5667789999999999999999999 999999999999999999999999888
No 86
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.02 E-value=0.0012 Score=41.64 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=48.1
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC--CchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE--KNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~--~~lRalyGL~l~~~~l~ 63 (111)
++++-.+|.+...+..+|.++...| +++.|+.+|.++++++| .+..++-.+......+.
T Consensus 43 ~~al~~~p~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 43 RAALDFDPTYSVAWKWLGKTLQGQG---DRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhc
Confidence 5677889999999999999999999 99999999999999998 45555555555444444
No 87
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.00 E-value=0.0014 Score=51.24 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=52.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
|+..-..|.+...+..+|.+++-+| +++.|+++|.++++++|++..++|.+-.+...+.+.
T Consensus 263 ~~~~~~~~~~~~~~~nla~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~ 323 (370)
T 1ihg_A 263 ADGAKLQPVALSCVLNIGACKLKMS---DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEY 323 (370)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCH
Confidence 3455578888999999999999998 899999999999999999999999988887765543
No 88
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.99 E-value=0.00095 Score=41.98 Aligned_cols=43 Identities=19% Similarity=0.181 Sum_probs=39.9
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
+++++-.+|.++..+..+|.+++..| +++.|+.+|.++++++|
T Consensus 30 ~~~al~~~p~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 30 FEELVETDPDYVGTYYHLGKLYERLD---RTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHSTTCTHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhhh
Confidence 35678899999999999999999999 99999999999999987
No 89
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.99 E-value=0.00044 Score=45.24 Aligned_cols=46 Identities=11% Similarity=0.046 Sum_probs=37.0
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR 50 (111)
+.++-++|.++-.+..+|.++...| +++.|+.+|.++++++|++.+
T Consensus 75 ~~al~l~P~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 75 NHARMLDPKDIAVHAALAVSHTNEH---NANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHC-------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCcCCCC
Confidence 5678899999999999999999999 999999999999999998754
No 90
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.96 E-value=0.00096 Score=41.18 Aligned_cols=58 Identities=12% Similarity=0.043 Sum_probs=46.8
Q ss_pred ccchhcCCCC-------HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHN-------HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n-------~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.+ +..+..+|.+++..| +++.|+++|.+++++.| +...+..+..+-..+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEE---KYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHhhccccchhHHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 3455566666 888999999999998 99999999999999999 5777777776665444
No 91
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0023 Score=39.08 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 11 NHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 11 n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.|...+.
T Consensus 3 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 52 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQG---LYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG 52 (111)
T ss_dssp HHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc
Confidence 3456778899999999 9999999999999999999999999888776544
No 92
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.92 E-value=0.0015 Score=48.80 Aligned_cols=57 Identities=19% Similarity=0.140 Sum_probs=40.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
++++-..|.++..+..+|.++.-+| +++.|..+|.++++++|++..+++.+..+...
T Consensus 190 ~~~l~~~p~~~~~~~~la~~~~~~g---~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~ 246 (291)
T 3mkr_A 190 QEMADKCSPTLLLLNGQAACHMAQG---RWEAAEGVLQEALDKDSGHPETLINLVVLSQH 246 (291)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4556667777777777777777777 77777777777777777777777776655543
No 93
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.91 E-value=0.0021 Score=44.05 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=30.5
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++-..|.+...+..+|.+++..| +++.|.++|.+++++.|++..+++.+-.+.
T Consensus 48 ~~l~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 101 (243)
T 2q7f_A 48 KAIEENKEDAIPYINFANLLSSVN---ELERALAFYDKALELDSSAATAYYGAGNVY 101 (243)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 344455656666666666666555 555666666666666555555555544443
No 94
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.91 E-value=0.00085 Score=42.80 Aligned_cols=46 Identities=22% Similarity=0.290 Sum_probs=42.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR 50 (111)
++++-..|.++..+..+|.+++-.| +++.|+.+|.+++++.|++..
T Consensus 51 ~~al~~~p~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~p~~~~ 96 (117)
T 3k9i_A 51 ANGVKQFPNHQALRVFYAMVLYNLG---RYEQGVELLLKIIAETSDDET 96 (117)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHhCCCchHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCcHH
Confidence 5678889999999999999999999 999999999999999997654
No 95
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=96.90 E-value=0.0014 Score=52.33 Aligned_cols=61 Identities=11% Similarity=-0.085 Sum_probs=54.8
Q ss_pred ccchhcCC---CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHhh
Q psy14212 2 EELFLHHP---HNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTS 65 (111)
Q Consensus 2 EEvlL~~P---~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~~ 65 (111)
++++-++| .++..+..+|.+++-.| +++.|+.+|.++++++|++..+++.+-.+...+.+.
T Consensus 245 ~~al~~~p~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 245 AQAEKVDRKASSNPDLHLNRATLHKYEE---SYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp HHHHHHCGGGGGCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 55677899 99999999999999999 999999999999999999999999998887766543
No 96
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.00096 Score=45.94 Aligned_cols=54 Identities=9% Similarity=-0.125 Sum_probs=47.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC------CCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLN------EKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~------~~~lRalyGL~l~ 58 (111)
++++-.+|.++..+..+|.+++..| +++.|+.+|.++++++ |++..++-.|..|
T Consensus 197 ~~al~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 197 NKAIEKDPNFVRAYIRKATAQIAVK---EYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 5677789999999999999999999 9999999999999999 8887776665543
No 97
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.88 E-value=0.0017 Score=43.71 Aligned_cols=51 Identities=14% Similarity=0.093 Sum_probs=25.5
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHH
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLAL 57 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l 57 (111)
++-..|.+...+..+|.++...| +++.|+++|.++++++|++..+++.+-.
T Consensus 34 ~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 84 (225)
T 2vq2_A 34 ALKSDPKNELAWLVRAEIYQYLK---VNDKAQESFRQALSIKPDSAEINNNYGW 84 (225)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHhCccchHHHHHHHHHHHHcC---ChHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34444555555555555555554 4555555555555555555444444433
No 98
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.87 E-value=0.0012 Score=56.71 Aligned_cols=53 Identities=28% Similarity=0.241 Sum_probs=25.7
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+|-++|.+...|..+|.+++..| +++.|+++|.+||+++|++..+++.|-.+-
T Consensus 103 Al~l~P~~~~a~~~Lg~~~~~~g---~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l 155 (723)
T 4gyw_A 103 AIQINPAFADAHSNLASIHKDSG---NIPEAIASYRTALKLKPDFPDAYCNLAHCL 155 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCChHHHhhhhhHH
Confidence 34444444444444454444444 445555555555555555555544444433
No 99
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.87 E-value=0.002 Score=45.87 Aligned_cols=57 Identities=21% Similarity=0.099 Sum_probs=49.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
++++-..|.+...+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+...
T Consensus 45 ~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 45 EAVCQAAPEREEAWRSLGLTQAENE---KDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 4667788999999999999999998 89999999999999999999999888766543
No 100
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.86 E-value=0.00064 Score=52.07 Aligned_cols=53 Identities=11% Similarity=0.006 Sum_probs=23.1
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
.+|-++|.+...+.++|.+++..| +++.|+++|.++++++|++..+++.|..+
T Consensus 255 ~al~~~p~~~~a~~~lg~a~~~~g---~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 255 IVLTEEEKNPKALFRRGKAKAELG---QMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTT---CHHHHHHHHHHTTC---------------
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 345556666666666666666655 56666666666666666655555554433
No 101
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.85 E-value=0.0026 Score=39.94 Aligned_cols=51 Identities=12% Similarity=-0.048 Sum_probs=43.9
Q ss_pred ccchhcCCCC---HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhH
Q psy14212 2 EELFLHHPHN---HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGL 55 (111)
Q Consensus 2 EEvlL~~P~n---~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL 55 (111)
++++-..|.+ +..+..+|.+++..| +++.|+++|.++++..|++..+....
T Consensus 63 ~~~~~~~p~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~~~~~p~~~~~~~a~ 116 (129)
T 2xev_A 63 RDLVSRYPTHDKAAGGLLKLGLSQYGEG---KNTEAQQTLQQVATQYPGSDAARVAQ 116 (129)
T ss_dssp HHHHHHCTTSTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTSHHHHHHH
T ss_pred HHHHHHCCCCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHCCCChHHHHHH
Confidence 5677788999 888999999999999 99999999999999999887654433
No 102
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.85 E-value=0.0011 Score=55.50 Aligned_cols=59 Identities=14% Similarity=0.054 Sum_probs=48.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-.+|.++..|..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..++.
T Consensus 457 ~~al~~~p~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 457 DDLAERVGWRWRLVWYRAVAELLTG---DYDSATKHFTEVLDTFPGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHT
T ss_pred HHHhccCcchHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC
Confidence 4567778889888888899888888 8888999999999999888888888777765443
No 103
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.84 E-value=0.0028 Score=47.72 Aligned_cols=59 Identities=20% Similarity=0.177 Sum_probs=47.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.+...+..+|.++...| +++.|+++|.++++++|++..++.++-.+-..+.
T Consensus 319 ~~a~~~~p~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 319 SEVLQMEPDNVNALKDRAEAYLIEE---MYDEAIQDYETAQEHNENDQQIREGLEKAQRLLK 377 (450)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhh
Confidence 4556678888888888888888888 8888999999998888888888888876655443
No 104
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0015 Score=49.73 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=50.4
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++++-.+| ++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..++.
T Consensus 29 ~~~al~~~p-~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 87 (514)
T 2gw1_A 29 YNWALELKE-DPVFYSNLSACYVSVG---DLKKVVEMSTKALELKPDYSKVLLRRASANEGLG 87 (514)
T ss_dssp HHHHHHHCC-CHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCc-cHHHHHhHHHHHHHHh---hHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHh
Confidence 356777889 6888999999999999 8999999999999999999999998877765543
No 105
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.84 E-value=0.0016 Score=49.02 Aligned_cols=54 Identities=20% Similarity=0.266 Sum_probs=24.7
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++..+|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.
T Consensus 17 ~~~~~~p~~~~~~~~~~~~~~~~g---~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~ 70 (450)
T 2y4t_A 17 NLYFQSMADVEKHLELGKKLLAAG---QLADALSQFHAAVDGDPDNYIAYYRRATVF 70 (450)
T ss_dssp ------CHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 444455555555555555555555 455555555555555555555555444443
No 106
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.83 E-value=0.0029 Score=44.02 Aligned_cols=59 Identities=10% Similarity=-0.032 Sum_probs=47.2
Q ss_pred ccchh--cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFL--HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL--~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++- ..|.++..+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+.....
T Consensus 129 ~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g 189 (252)
T 2ho1_A 129 LEASQDTLYPERSRVFENLGLVSLQMK---KPAQAKEYFEKSLRLNRNQPSVALEMADLLYKER 189 (252)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HHHHhCccCcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcC
Confidence 34445 67888888888999988888 8889999999999999988888888877665543
No 107
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.82 E-value=0.002 Score=45.92 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=27.2
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+.
T Consensus 163 ~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (327)
T 3cv0_A 163 AALEMNPNDAQLHASLGVLYNLSN---NYDSAAANLRRAVELRPDDAQLWNKLGATL 216 (327)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhhCCCCHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 344445555555555555555555 455555555555555555555544444333
No 108
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.82 E-value=0.0028 Score=50.83 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=29.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
++++-.+|.+...+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+..
T Consensus 13 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 68 (568)
T 2vsy_A 13 RAAVRHRPQDFVAWLMLADAELGMG---DTTAGEMAVQRGLALHPGHPEAVARLGRVRW 68 (568)
T ss_dssp --------CCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4455556666666666666666666 6666666666666666666666665555443
No 109
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.80 E-value=0.0029 Score=43.34 Aligned_cols=52 Identities=10% Similarity=-0.013 Sum_probs=25.9
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+
T Consensus 83 ~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 134 (243)
T 2q7f_A 83 ALELDSSAATAYYGAGNVYVVKE---MYKEAKDMFEKALRAGMENGDLFYMLGTV 134 (243)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred HHHcCCcchHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34444555555555555555554 45555555555555555544444444333
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.78 E-value=0.0022 Score=51.38 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=47.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
++++-.+|.+...+..+|.+++..| +++.|.++|.++++++|++..+++.+-.+....
T Consensus 47 ~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 104 (568)
T 2vsy_A 47 QRGLALHPGHPEAVARLGRVRWTQQ---RHAEAAVLLQQASDAAPEHPGIALWLGHALEDA 104 (568)
T ss_dssp HHHHTTSTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 5667788888888888999888888 888899999999999988888888877665543
No 111
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.77 E-value=0.0029 Score=42.54 Aligned_cols=50 Identities=16% Similarity=0.018 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
.|.++..+..+|.+++..| +++.|+++|.++++++|++..+++.+-.+..
T Consensus 109 ~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 158 (225)
T 2vq2_A 109 YPTPYIANLNKGICSAKQG---QFGLAEAYLKRSLAAQPQFPPAFKELARTKM 158 (225)
T ss_dssp CSCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 4455556666666666665 5666666666666666666666665555543
No 112
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=96.76 E-value=0.0024 Score=45.58 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=46.9
Q ss_pred CccchhcCCCC---HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC---chHHHHhHHHHHHH
Q psy14212 1 MEELFLHHPHN---HLLHQRYADILYTQGGLENIELAISHYLMAINLNEK---NIRALYGLALSCHQ 61 (111)
Q Consensus 1 ~EEvlL~~P~n---~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~---~lRalyGL~l~~~~ 61 (111)
+++++-..|.+ +..+..+|.+++-.| +++.|+.+|.+++++.|+ ...++|.+-.|-..
T Consensus 38 ~~~~l~~~p~~~~~~~a~~~lg~~~~~~~---~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 38 FKAVFTYGRTHEWAADAQFYLARAYYQNK---EYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHHGGGCSCSTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHH
Confidence 35677788888 888999999999998 899999999999999884 45677776666543
No 113
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.74 E-value=0.0028 Score=44.05 Aligned_cols=57 Identities=25% Similarity=0.281 Sum_probs=44.0
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhc--cCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAIN--LNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~ale--L~~~~lRalyGL~l~~~~ 61 (111)
++++-..|.+...+..+|.+++..| +++.|+++|.++++ ..|++..+++.+-.+...
T Consensus 95 ~~a~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 153 (252)
T 2ho1_A 95 RKALASDSRNARVLNNYGGFLYEQK---RYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ 153 (252)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCcHHHHHHHHHHHHHHh---HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH
Confidence 4566678888888888888888887 78888888888888 777777777777665544
No 114
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=96.72 E-value=0.012 Score=46.79 Aligned_cols=64 Identities=11% Similarity=-0.044 Sum_probs=54.2
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhc---CCc--ccHHHHHHHHHHHhccCC---CchHHHHhHHHHHHHHHh
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQ---GGL--ENIELAISHYLMAINLNE---KNIRALYGLALSCHQVLT 64 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~---Gg~--enl~~A~kyf~~aleL~~---~~lRalyGL~l~~~~l~~ 64 (111)
+++++-++|.++..+..+|.++... .|. .+++.|+++|.++++++| ++..+++.+-.+...+.+
T Consensus 202 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~ 273 (474)
T 4abn_A 202 AKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEES 273 (474)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCC
Confidence 3567889999999999999999888 111 299999999999999999 999999999888765443
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.72 E-value=0.0031 Score=42.97 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=38.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCch
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNI 49 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~l 49 (111)
++++-.+|.++..+..+|.+++..| +++.|+++|.++++++|++.
T Consensus 61 ~~al~~~~~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 61 TRSINRDKHLAVAYFQRGMLYYQTE---KYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHhCccchHHHHHHHHHHHHcc---cHHHHHHHHHHHHHhCCCcc
Confidence 4567788999999999999999888 89999999999999988654
No 116
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.72 E-value=0.0028 Score=51.08 Aligned_cols=59 Identities=19% Similarity=0.145 Sum_probs=45.1
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-.+|.+...+..+|.+++.+| +++.|+++|.+|++++|++..+++.+-.+-.++.
T Consensus 30 ~~Al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 88 (477)
T 1wao_1 30 SQAIELNPSNAIYYGNRSLAYLRTE---CYGYALGDATRAIELDKKYIKGYYRRAASNMALG 88 (477)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 4566678888888888888888877 7888888888888888888888877766655443
No 117
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.71 E-value=0.0028 Score=47.29 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=41.6
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
.++-.+|.+...+..+|.+++..| +++.|+.+|.++++++|++..+++++-.+..+
T Consensus 58 ~a~~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 113 (388)
T 1w3b_A 58 LAIKQNPLLAEAYSNLGNVYKERG---QLQEAIEHYRHALRLKPDFIDGYINLAAALVA 113 (388)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhcCCCchHHHHHHHHHHHHCC---CHHHHHHHHHHHHHcCcchHHHHHHHHHHHHH
Confidence 345567777777777788777777 78888888888888888888777777655543
No 118
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.65 E-value=0.023 Score=43.22 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=51.0
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
|+++-..|.++..+..+|.+++..| ++..|..+|.+|++++|++..+++.+-.|-..
T Consensus 237 ~~al~~~~~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 237 EEALEKAPGVTDVLRSAAKFYRRKD---EPDKAIELLKKALEYIPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp HHHHHHCSSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCccHHHHHHHHHHHHHHcC---chHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 5677889999999999999999999 89999999999999999999999988776543
No 119
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.64 E-value=0.0069 Score=38.82 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+....++..||.++|-+| +++.|+.+|.+++++.|++.+++..+...-
T Consensus 43 ~~~~~i~~~L~~~~~~~g---~~~~A~~~~~~al~l~P~~~~~~~n~~~~~ 90 (104)
T 2v5f_A 43 IDKVSVLDYLSYAVYQQG---DLDKALLLTKKLLELDPEHQRANGNLKYFE 90 (104)
T ss_dssp SCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhcCCCCHHHHhhHHHHH
Confidence 456788999999999999 999999999999999999999987776333
No 120
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.63 E-value=0.0037 Score=46.27 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=42.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc--hHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN--IRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~--lRalyGL~l~~~~ 61 (111)
++++-.+|.++-.+..+|.++...| +++.|+..|.++++++|++ ..++..+..+-..
T Consensus 209 ~~al~~~P~~~~~~~~la~~l~~~g---~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~ 267 (287)
T 3qou_A 209 QQQVAENPEDAALATQLALQLHQVG---RNEEALELLFGHLRXDLTAADGQTRXTFQEILAA 267 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 3456677888888888888888887 7888888888888888877 6666666655543
No 121
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.63 E-value=0.0021 Score=51.19 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=52.4
Q ss_pred ccchhcCCCC---------------HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHN---------------HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n---------------~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+++|-++|.+ ...+..+|.+++-+| +++.|+.+|.++|+++|++..++|.+-.+..++.+
T Consensus 292 ~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~ 366 (457)
T 1kt0_A 292 GKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR---EYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE 366 (457)
T ss_dssp HHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccC
Confidence 4567778888 688999999999999 99999999999999999999999999887765543
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.59 E-value=0.0028 Score=44.28 Aligned_cols=53 Identities=19% Similarity=0.132 Sum_probs=45.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLAL 57 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l 57 (111)
++++-..|.+...+..+|.+++-.| +++.|+++|.++++++|++......+.+
T Consensus 101 ~~al~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (275)
T 1xnf_A 101 DSVLELDPTYNYAHLNRGIALYYGG---RDKLAQDDLLAFYQDDPNDPFRSLWLYL 153 (275)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhcCccccHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 5677889999999999999999999 9999999999999999988755444433
No 123
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.56 E-value=0.002 Score=54.00 Aligned_cols=54 Identities=9% Similarity=-0.082 Sum_probs=45.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
++++-++|.+...+..+|.+++..| +++.|+.+|.++++++|++..|++.+-.+
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~~~~g---~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARARSAEG---DRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HHHHHhCCchHHHHHHHHHHHHHcC---CHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 5677788888888888888888888 88889999999999988888888776655
No 124
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.54 E-value=0.0025 Score=45.04 Aligned_cols=55 Identities=20% Similarity=0.183 Sum_probs=45.1
Q ss_pred ccchhcCCCCH---HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH---HHHhHHHHH
Q psy14212 2 EELFLHHPHNH---LLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR---ALYGLALSC 59 (111)
Q Consensus 2 EEvlL~~P~n~---~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR---alyGL~l~~ 59 (111)
++++-..|.++ ..+..+|.++|..| +++.|+..|.++++++|++.. |+|.+-++-
T Consensus 28 ~~~~~~~p~~~~~~~a~~~lg~~~~~~~---~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~ 88 (225)
T 2yhc_A 28 EALDNRYPFGPYSQQVQLDLIYAYYKNA---DLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTN 88 (225)
T ss_dssp HHHHHHCTTSTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHH
Confidence 56677778764 57888999999999 999999999999999998875 666555544
No 125
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.51 E-value=0.0067 Score=44.82 Aligned_cols=55 Identities=18% Similarity=0.076 Sum_probs=42.7
Q ss_pred ccchh-cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH-HHHhHHHHH
Q psy14212 2 EELFL-HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR-ALYGLALSC 59 (111)
Q Consensus 2 EEvlL-~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR-alyGL~l~~ 59 (111)
|.++- ++|.+..+|..+|.++...| +++.|++.|.+++++.|++.. +|..+..+.
T Consensus 88 ~rAl~~~~p~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 144 (308)
T 2ond_A 88 ERAISTLLKKNMLLYFAYADYEESRM---KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA 144 (308)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTSSSSCTHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhccccCccHHHHHHHHHH
Confidence 45566 58999888999999888888 888899999999999887764 665554443
No 126
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=96.46 E-value=0.0036 Score=44.61 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=49.9
Q ss_pred ccchhcCCCCHHHH-----------------HHHHHHHHhcCCcccHHHHHHHHHHHhccCCC---chHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLH-----------------QRYADILYTQGGLENIELAISHYLMAINLNEK---NIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h-----------------~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~---~lRalyGL~l~~~~ 61 (111)
++++-..|.+.... ..+|.+++..| +++.|+++|.++++..|+ ...++|.+-.+-..
T Consensus 121 ~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 121 QLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRE---LYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 56777889887666 67799999999 999999999999999997 56789988888776
Q ss_pred HH
Q psy14212 62 VL 63 (111)
Q Consensus 62 l~ 63 (111)
+.
T Consensus 198 ~g 199 (261)
T 3qky_A 198 YA 199 (261)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 127
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.45 E-value=0.0053 Score=43.73 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=30.4
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+++-..|.++..+..+|.++...| +++.|.++|.++++++|++..+++.+-.+.
T Consensus 150 ~a~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 150 TAAQLMKGCHLPMLYIGLEYGLTN---NSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp HHHHHTTTCSHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHhccccHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 344445555555555555555555 556666666666666666655555554443
No 128
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.44 E-value=0.0019 Score=49.34 Aligned_cols=59 Identities=20% Similarity=0.179 Sum_probs=50.4
Q ss_pred ccchhcCCCCHH-----------------HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHL-----------------LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~-----------------~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
++++-..|.++. .|..+|.+++.+| +++.|+++|.++|+++|++..++|.+-.+...+.
T Consensus 203 ~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g---~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g 278 (338)
T 2if4_A 203 EMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK---RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG 278 (338)
T ss_dssp HHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT---CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 456677888773 7888999999998 8999999999999999999999999888765544
No 129
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.41 E-value=0.0035 Score=50.49 Aligned_cols=54 Identities=11% Similarity=0.007 Sum_probs=49.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
++++-++|.+...+..+|.+++.+| +++.|.++|.++++++|++..+++.+..+
T Consensus 64 ~~al~l~p~~~~~~~~lg~~~~~~g---~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 64 TRAIELDKKYIKGYYRRAASNMALG---KFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5677889999999999999999999 99999999999999999998888877766
No 130
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.35 E-value=0.003 Score=50.22 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=48.8
Q ss_pred CccchhcCCC--CHHHHHHHHHHHHhc----CCcccHHHHHHHHHHHhccCCCc---hHHHHhHHHHH
Q psy14212 1 MEELFLHHPH--NHLLHQRYADILYTQ----GGLENIELAISHYLMAINLNEKN---IRALYGLALSC 59 (111)
Q Consensus 1 ~EEvlL~~P~--n~~~h~rlAEi~Yt~----Gg~enl~~A~kyf~~aleL~~~~---lRalyGL~l~~ 59 (111)
+|.+|-++|+ +.--|.-+|-++|.. || +.+.|++||-+||++||+. .+.+||=.+|.
T Consensus 186 lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG--d~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 186 LERACDLWPSYQEGAVWNVLTKFYAAAPESFGG--GMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC--CHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC--CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 4678899999 677999999888885 44 8999999999999999964 69999988876
No 131
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.35 E-value=0.0037 Score=48.85 Aligned_cols=59 Identities=14% Similarity=0.004 Sum_probs=52.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++|-++|.+...+.++|.+++..| +++.|+++|.+|++++|++..++..+..+-..+.
T Consensus 297 ~~al~~~p~~~~a~~~lg~~~~~~g---~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 297 LEALEIDPSNTKALYRRAQGWQGLK---EYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCchhHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999 9999999999999999999988888777766544
No 132
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.35 E-value=0.0043 Score=48.60 Aligned_cols=54 Identities=9% Similarity=0.001 Sum_probs=41.6
Q ss_pred CCCC-HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 8 HPHN-HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 8 ~P~n-~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
.|.+ ...+..+|++++..| +++.|+++|.++++++|++..+++.+-.+..+..+
T Consensus 511 ~p~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 511 NEKPWAATWANLGHAYRKLK---MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp CSGGGHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred chhhHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 5665 567778888888888 88888888888888888888888877777665443
No 133
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.32 E-value=0.0058 Score=46.93 Aligned_cols=55 Identities=15% Similarity=0.083 Sum_probs=34.3
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+++-..|.++..+..+|.+++..| +++.|+.+|.++++++|++..+++++-.+..
T Consensus 301 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 355 (537)
T 3fp2_A 301 KAVDLNPEYPPTYYHRGQMYFILQ---DYKNAKEDFQKAQSLNPENVYPYIQLACLLY 355 (537)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCSHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 445556666666666666666666 6666666666666666666666666555443
No 134
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.06 E-value=0.0019 Score=49.30 Aligned_cols=54 Identities=24% Similarity=0.140 Sum_probs=33.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGL 55 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL 55 (111)
|.++-++|.++-+|..+|.+.|..|.....+.|..+|.+|++++|++..+++.+
T Consensus 162 ~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l 215 (472)
T 4g1t_A 162 EKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLL 215 (472)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHH
Confidence 455666777777777777776666544455566666777777777665554433
No 135
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.95 E-value=0.0088 Score=44.15 Aligned_cols=54 Identities=11% Similarity=0.014 Sum_probs=43.9
Q ss_pred ccchhcCCCCHH-HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 2 EELFLHHPHNHL-LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~-~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
+.+|-+.|.++- .+..+|.++...| +++.|++.|.++++++|.+...+.|....
T Consensus 123 ~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 123 NRLLAIEDIDPTLVYIQYMKFARRAE---GIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp HHHHTSSSSCTHHHHHHHHHHHHHHH---CHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred HHHHhccccCccHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 566778898875 8889999988888 78889999999999999887777765544
No 136
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.88 E-value=0.02 Score=42.19 Aligned_cols=52 Identities=15% Similarity=0.010 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+-.|-.++.
T Consensus 1 p~~a~~~~~~g~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 52 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGR---KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ 52 (281)
T ss_dssp CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc
Confidence 677788889999999999 9999999999999999999999999888776543
No 137
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=95.86 E-value=0.016 Score=45.40 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=37.0
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+++-..|.+...+..+|.+++..| +++.|+++|.++++++|++..+++.+..+..
T Consensus 364 ~~~~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 418 (597)
T 2xpi_A 364 DLVDRHPEKAVTWLAVGIYYLCVN---KISEARRYFSKSSTMDPQFGPAWIGFAHSFA 418 (597)
T ss_dssp HHHHHCTTSHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhhCcccHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344456777777777777777776 6777777777777777777777666655543
No 138
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.012 Score=44.69 Aligned_cols=46 Identities=24% Similarity=0.057 Sum_probs=27.6
Q ss_pred HHHHHHHHHHh---cCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 14 LHQRYADILYT---QGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 14 ~h~rlAEi~Yt---~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
.+..+|.+++. .| +++.|+++|.++++++|++..+++.+-.+..+.
T Consensus 414 ~~~~l~~~~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 462 (514)
T 2gw1_A 414 PLVGKATLLTRNPTVE---NFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQ 462 (514)
T ss_dssp HHHHHHHHHHTSCCTT---HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhcC---CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh
Confidence 45555666666 55 666666666666666666666666555555443
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=95.84 E-value=0.011 Score=42.52 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc-------CCCchHHH----HhHHHHHHHHHh
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINL-------NEKNIRAL----YGLALSCHQVLT 64 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL-------~~~~lRal----yGL~l~~~~l~~ 64 (111)
..|.-.|.++.-.| +++.|+..|.+||++ +|++.-|| |..-.+-..+.+
T Consensus 58 ~a~~n~g~al~~Lg---r~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr 117 (159)
T 2hr2_A 58 FCHAGLAEALAGLR---SFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGR 117 (159)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCC---CHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCC
Confidence 38889999999999 899999999999999 99999999 988777665543
No 140
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=95.83 E-value=0.0035 Score=42.53 Aligned_cols=45 Identities=16% Similarity=-0.032 Sum_probs=36.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR 50 (111)
++++-.+|.++..+..+|.++...| +++.|+++|.+++++.| +..
T Consensus 30 ~~al~~~P~~~~a~~~la~~~~~~g---~~~~A~~~~~~a~~~~p-~~~ 74 (176)
T 2r5s_A 30 QTLSDELQSRGDVKLAKADCLLETK---QFELAQELLATIPLEYQ-DNS 74 (176)
T ss_dssp HTSCHHHHTSHHHHHHHHHHHHHTT---CHHHHHHHHTTCCGGGC-CHH
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHCC---CHHHHHHHHHHhhhccC-ChH
Confidence 4567778888888888888888888 78888888888888888 554
No 141
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.81 E-value=0.022 Score=42.10 Aligned_cols=51 Identities=22% Similarity=0.069 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
.|.+.-.+..+|..+...| +++.|...|.++++++|++.++++++-.+..+
T Consensus 113 lp~~~~~~~~~a~~~~~~g---~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~ 163 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQES---NYTDALPLLXDAWQLSNQNGEIGLLLAETLIA 163 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHhCC---CHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH
Confidence 4888888889999999888 89999999999999999999999998876544
No 142
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.55 E-value=0.037 Score=33.35 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH-HHHhHHHHHHHHH
Q psy14212 16 QRYADILYTQGGLENIELAISHYLMAINLNEKNIR-ALYGLALSCHQVL 63 (111)
Q Consensus 16 ~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR-alyGL~l~~~~l~ 63 (111)
...|.+++..| +++.|+++|.++++++|++.. +++.+-.|.....
T Consensus 4 ~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~ 49 (99)
T 2kc7_A 4 LKTIKELINQG---DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG 49 (99)
T ss_dssp HHHHHHHHHHT---CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC---CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC
Confidence 35688899888 999999999999999999999 9998887766544
No 143
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.53 E-value=0.016 Score=41.58 Aligned_cols=60 Identities=17% Similarity=-0.053 Sum_probs=40.7
Q ss_pred ccchhcC-C-CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHH-P-HNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~-P-~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
|+++-.. | .+--++--+|=.+|=.| ++..|++||-++++..|+|.-|.....++-+++..
T Consensus 59 e~ll~~~~p~~~rd~lY~LAv~~~kl~---~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 59 EELLPKGSKEEQRDYVFYLAVGNYRLK---EYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCccchHHHHHHHHHHHHHcc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 4555555 5 22223333344446666 88888888888888888888888888887776654
No 144
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=95.24 E-value=0.023 Score=39.97 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=46.3
Q ss_pred ccchhcCCCCHHHH-----------------HHHHHHHHhcCCcccHHHHHHHHHHHhccCCCch---HHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLH-----------------QRYADILYTQGGLENIELAISHYLMAINLNEKNI---RALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h-----------------~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~l---RalyGL~l~~~~ 61 (111)
++++-..|.+.... ..+|++++..| ++..|+..|.++++..|++. .+++.+-.|..+
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 196 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG---AWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQ 196 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHH
Confidence 45677788876433 46788888888 99999999999999999765 778888777665
Q ss_pred HH
Q psy14212 62 VL 63 (111)
Q Consensus 62 l~ 63 (111)
+.
T Consensus 197 ~g 198 (225)
T 2yhc_A 197 MQ 198 (225)
T ss_dssp TT
T ss_pred cC
Confidence 44
No 145
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.06 E-value=0.035 Score=43.86 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=31.5
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALY 53 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRaly 53 (111)
|.++-..|.++.+...+|+.....| +++.|++.|.++|+.+| +...|+
T Consensus 36 e~al~~~P~~~~~w~~~~~~~~~~~---~~~~a~~~~~ral~~~p-~~~lw~ 83 (530)
T 2ooe_A 36 ERLVAQFPSSGRFWKLYIEAEIKAK---NYDKVEKLFQRCLMKVL-HIDLWK 83 (530)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTTTCC-CHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhcCC-ChHHHH
Confidence 4455666777777777777766666 66777777777777777 344333
No 146
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.02 E-value=0.028 Score=36.00 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=41.5
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN 48 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~ 48 (111)
++++|-.+|+|.--..-+|.++|-.| ++..|+.+|.++++.+|..
T Consensus 32 l~~AL~~dp~~~rA~~~lg~~~~~~g---~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 32 LEQALQLEPYNEAALSLIANDHFISF---RFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHCcCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCC
Confidence 35778899999999999999999999 9999999999999999974
No 147
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.02 E-value=0.046 Score=43.23 Aligned_cols=56 Identities=11% Similarity=-0.109 Sum_probs=48.0
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
+|+.|-.+|.+...+..+++. ...| +++.|++.|.++++..|++.+.|+.+.-...
T Consensus 2 le~al~~~P~~~~~w~~l~~~-~~~~---~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~ 57 (530)
T 2ooe_A 2 AEKKLEENPYDLDAWSILIRE-AQNQ---PIDKARKTYERLVAQFPSSGRFWKLYIEAEI 57 (530)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH-HHSS---CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred hhhHhhhCCCCHHHHHHHHHH-HHhC---CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 478889999999999999984 4455 8999999999999999999999887765543
No 148
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.57 E-value=0.024 Score=39.07 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=44.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc--------CCCchHHHHhHHHHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL--------NEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL--------~~~~lRalyGL~l~~~~l~ 63 (111)
.|.....+..+|.+++..| +++.|..+|.+++++ .|....+++.+-.+.....
T Consensus 123 ~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 183 (283)
T 3edt_B 123 HPDVAKQLNNLALLCQNQG---KAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQG 183 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcC
Confidence 4677788999999999999 999999999999999 6777888888777765443
No 149
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=94.50 E-value=0.014 Score=42.01 Aligned_cols=40 Identities=15% Similarity=0.064 Sum_probs=36.9
Q ss_pred CCCCHHHH----HHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH
Q psy14212 8 HPHNHLLH----QRYADILYTQGGLENIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 8 ~P~n~~~h----~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR 50 (111)
+|.+.-.| .+.|.++..+| +++.|+..|-+|++++|++--
T Consensus 94 ~pd~~~A~~~~~~~rG~aL~~lg---r~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 94 NQDEGKLWISAVYSRALALDGLG---RGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHCCS
T ss_pred CCchHHHHHHHHHhHHHHHHHCC---CHHHHHHHHHHHHhcCCCcHH
Confidence 99999999 99999999999 999999999999999986543
No 150
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.98 E-value=0.044 Score=40.68 Aligned_cols=56 Identities=7% Similarity=0.068 Sum_probs=34.5
Q ss_pred ccchhcCCCCH----HHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc------CCCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNH----LLHQRYADILYTQGGLENIELAISHYLMAINL------NEKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~----~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL------~~~~lRalyGL~l~~~ 60 (111)
++++-..|.++ ..+..+|.+++..| +++.|..+|.+++++ .+...++++.+-.+..
T Consensus 72 ~~al~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 137 (411)
T 4a1s_A 72 QAAIQAGTEDLRTLSAIYSQLGNAYFYLG---DYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK 137 (411)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccChhHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH
Confidence 44555666665 35666777777776 677777777777776 3445555555544443
No 151
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.94 E-value=0.041 Score=40.35 Aligned_cols=57 Identities=16% Similarity=-0.028 Sum_probs=41.9
Q ss_pred ccchhcCCCC------HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchH-------HHHhHHHHHHH
Q psy14212 2 EELFLHHPHN------HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIR-------ALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n------~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lR-------alyGL~l~~~~ 61 (111)
++++-+.|.+ ...+..+|+++.-.| +++.|+.+|.++++++|++.. +++++-.|...
T Consensus 142 ~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 211 (292)
T 1qqe_A 142 ELAGEWYAQDQSVALSNKCFIKCADLKALDG---QYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLA 211 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 3445555543 456788999999999 999999999999999986532 55666555543
No 152
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=93.90 E-value=0.064 Score=37.51 Aligned_cols=56 Identities=9% Similarity=0.021 Sum_probs=38.1
Q ss_pred ccchhcCCCCH----HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC------CCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNH----LLHQRYADILYTQGGLENIELAISHYLMAINLN------EKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~----~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~------~~~lRalyGL~l~~~ 60 (111)
++++-..|.++ ..+..+|.+++..| +++.|..+|.+++++. +...++++.+-.+..
T Consensus 29 ~~al~~~~~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 94 (338)
T 3ro2_A 29 EAAVQVGTEDLKTLSAIYSQLGNAYFYLH---DYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 94 (338)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCcccHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHH
Confidence 45566677774 56677888888887 7888888888888773 344556655554443
No 153
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.84 E-value=0.18 Score=35.60 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=14.1
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhc
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAIN 43 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~ale 43 (111)
|.++..+..+|.+++..| +++.|.++|.++++
T Consensus 3 ~~~~~a~~~lg~~~~~~~---~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 3 EQDPKELVGLGAKSYKEK---DFTQAKKYFEKACD 34 (273)
T ss_dssp --CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhCC---CHHHHHHHHHHHHH
Confidence 444444444444444444 44444444444444
No 154
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.19 E-value=0.064 Score=39.32 Aligned_cols=47 Identities=9% Similarity=-0.051 Sum_probs=33.6
Q ss_pred ccchhcCCCCHH-------HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHH
Q psy14212 2 EELFLHHPHNHL-------LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRA 51 (111)
Q Consensus 2 EEvlL~~P~n~~-------~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRa 51 (111)
++++-+.|.+.. ++..+|.++.-+| ++..|+.+|.++++++|++..+
T Consensus 182 ~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 182 SKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT---DAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp HHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTT---CHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHhcCCcccHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCCCc
Confidence 456667776643 5788999999999 9999999999999999976543
No 155
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.01 E-value=0.089 Score=38.37 Aligned_cols=56 Identities=9% Similarity=0.021 Sum_probs=36.3
Q ss_pred ccchhcCCCCH----HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC------CCchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNH----LLHQRYADILYTQGGLENIELAISHYLMAINLN------EKNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~----~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~------~~~lRalyGL~l~~~ 60 (111)
++++-..|.++ ..+..+|.+++..| +++.|..+|.+++++. |...++++.+-.+..
T Consensus 33 ~~al~~~~~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 98 (406)
T 3sf4_A 33 EAAVQVGTEDLKTLSAIYSQLGNAYFYLH---DYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 98 (406)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 45556677774 45667777777777 7777888887777773 344555555554443
No 156
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.93 E-value=0.053 Score=37.31 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc--------CCCchHHHHhHHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL--------NEKNIRALYGLALSCHQ 61 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL--------~~~~lRalyGL~l~~~~ 61 (111)
.|.....+..+|.+++..| +++.|..+|.+++++ +|....+++.+-.+...
T Consensus 81 ~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 139 (283)
T 3edt_B 81 HPAVAATLNNLAVLYGKRG---KYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN 139 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 4667778899999999999 999999999999999 46777888777666543
No 157
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.91 E-value=0.16 Score=37.62 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 30 NIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 30 nl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
+++.|.+.|.++++.+|++..+++++-.|..+
T Consensus 181 ~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~ 212 (291)
T 3mkr_A 181 KLQDAYYIFQEMADKCSPTLLLLNGQAACHMA 212 (291)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 56666666666666666666666666655544
No 158
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=92.72 E-value=0.051 Score=38.17 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=33.6
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
++-..|.+...+..+|++++..| +++.|.++|.+++++.|+
T Consensus 270 ~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 270 CKVDSPTVTTTLKNLGALYRRQG---KFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp ----CHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHC-
T ss_pred cCCCCchHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHhhc
Confidence 34467888899999999999999 999999999999998774
No 159
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=92.43 E-value=0.18 Score=35.34 Aligned_cols=52 Identities=19% Similarity=0.120 Sum_probs=27.8
Q ss_pred CCCCHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCC--CchHHHHhHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQ-GGLENIELAISHYLMAINLNE--KNIRALYGLALSC 59 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~--~~lRalyGL~l~~ 59 (111)
.|.++..+..+|.+++.- |...|+..|+++|.+|++..| ++..|+|-|-.+-
T Consensus 81 ~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y 135 (212)
T 3rjv_A 81 EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIY 135 (212)
T ss_dssp HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 345555555566666542 224466666666666666655 3455555544443
No 160
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=91.82 E-value=0.25 Score=34.54 Aligned_cols=52 Identities=19% Similarity=0.103 Sum_probs=43.2
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc--------CCCchHHHHhHHHHHHH
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL--------NEKNIRALYGLALSCHQ 61 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL--------~~~~lRalyGL~l~~~~ 61 (111)
-.|.+...+..+|.+++..| +++.|+++|.+++++ .|...++++.+-.+...
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~ 81 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQG---RYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD 81 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 36788889999999999999 999999999999997 45677777777666544
No 161
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=90.94 E-value=1.3 Score=34.09 Aligned_cols=61 Identities=16% Similarity=-0.031 Sum_probs=52.0
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+.+|.++|.++-....=++++...|. .+++.+++.+..+|++||++.-+|+--..+..++.
T Consensus 57 ~~~L~~nP~~~taWn~R~~~L~~l~~-~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~ 117 (306)
T 3dra_A 57 ELGINELASHYTIWIYRFNILKNLPN-RNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIM 117 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTCTT-SCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCcHHHHHHHHHHHHHHHccc-ccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHH
Confidence 57899999998887777999988874 48999999999999999999999888877775544
No 162
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=90.84 E-value=0.11 Score=38.51 Aligned_cols=54 Identities=19% Similarity=0.100 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc------CCCchHHHHhHHHHHHHHHh
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL------NEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL------~~~~lRalyGL~l~~~~l~~ 64 (111)
.|.....+..+|.+++..| +++.|..+|.+++++ .+...++++.+-.+.....+
T Consensus 122 ~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 122 RLGEAKSSGNLGNTLKVMG---RFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 4677788999999999999 999999999999999 45677788877777665554
No 163
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.75 E-value=0.24 Score=40.07 Aligned_cols=41 Identities=12% Similarity=0.028 Sum_probs=35.3
Q ss_pred hhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc
Q psy14212 5 FLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN 48 (111)
Q Consensus 5 lL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~ 48 (111)
+...|.++..|..+|=+....| +++.|+.++.+|++|||+.
T Consensus 270 ~~~~~~~a~~~~alal~~l~~g---d~d~A~~~l~rAl~Ln~s~ 310 (372)
T 3ly7_A 270 LPELNNLSIIYQIKAVSALVKG---KTDESYQAINTGIDLEMSW 310 (372)
T ss_dssp CGGGTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCCCH
T ss_pred cccCCcCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHhcCCCH
Confidence 4567999999999998888888 8999999999999999864
No 164
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=90.62 E-value=0.9 Score=31.91 Aligned_cols=47 Identities=19% Similarity=0.082 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHh----cCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHH
Q psy14212 9 PHNHLLHQRYADILYT----QGGLENIELAISHYLMAINLNEKNIRALYGLALSCH 60 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt----~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~ 60 (111)
|.+...+..+|.+++. .| +++.|.++|.++++++ +..+++.+-.+..
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~---~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 85 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEK---NLKKAASFYAKACDLN--YSNGCHLLGNLYY 85 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCC---CHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCcCC---CHHHHHHHHHHHHHCC--CHHHHHHHHHHHh
Confidence 6777777788888777 44 7888888888888875 5667666655543
No 165
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=90.53 E-value=0.34 Score=30.89 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
...+||.+-+.| +++.|..||+.||..||+
T Consensus 20 eV~~GE~L~~~g---~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 20 EIQLGEELLAQG---DYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHcCC
Confidence 467899999999 688999999999999985
No 166
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=90.45 E-value=0.2 Score=33.55 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
...+||.+-+.| +++.|..||+.||..||+
T Consensus 23 eV~lGE~L~~~g---~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 23 EIQLGEELLAQG---DYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHT---CHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHcCC
Confidence 467899999999 699999999999999985
No 167
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=90.34 E-value=0.12 Score=38.19 Aligned_cols=45 Identities=11% Similarity=0.049 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc------hHHHHhHHHHH
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN------IRALYGLALSC 59 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~------lRalyGL~l~~ 59 (111)
...+..+|+++.-+| +++.|+.+|.+++++.+++ .++++++.+|-
T Consensus 155 ~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~ 205 (307)
T 2ifu_A 155 AELIGKASRLLVRQQ---KFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQ 205 (307)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHH
Confidence 456777888888888 8889999999999887632 23555554443
No 168
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.24 E-value=0.43 Score=38.60 Aligned_cols=54 Identities=9% Similarity=-0.180 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
+|.+|-++.|- --+...+..+++..|+..|.+||++.|++.+|+=|+.+|.-.+
T Consensus 193 ~~~Aydl~Lra-~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~ 246 (372)
T 3ly7_A 193 RGALLTNFYQA-HDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVR 246 (372)
T ss_dssp SGGGHHHHHHH-HHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 44566666663 3333446788999999999999999999999999999988643
No 169
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=90.05 E-value=0.49 Score=31.20 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=31.2
Q ss_pred hcCC-CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC------CCchHHHHhHHHHH
Q psy14212 6 LHHP-HNHLLHQRYADILYTQGGLENIELAISHYLMAINLN------EKNIRALYGLALSC 59 (111)
Q Consensus 6 L~~P-~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~------~~~lRalyGL~l~~ 59 (111)
.-+| .....+..+|.+++..| +++.|+.+|.+++++. +...++++.+-.+.
T Consensus 19 ~~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 76 (203)
T 3gw4_A 19 LAHPATASGARFMLGYVYAFMD---RFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVE 76 (203)
T ss_dssp HTSTTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 3344 45566667777777777 7777777777777743 33445555544443
No 170
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=89.61 E-value=0.47 Score=32.96 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
..+..+|.+++..| +++.|.++|.+++++.+
T Consensus 184 ~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 184 RAFGNLGNTHYLLG---NFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence 34444555555555 45555555555554443
No 171
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.58 E-value=0.82 Score=28.17 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc------hHHHHhHHHHH
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLNEKN------IRALYGLALSC 59 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~------lRalyGL~l~~ 59 (111)
..+..+|.+++..| +++.|.++|.+++++.++. .++++.+-.+.
T Consensus 50 ~~~~~l~~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~ 99 (164)
T 3ro3_A 50 IAYSNLGNAYIFLG---EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTY 99 (164)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 36677888888888 8888888888888887632 44555444443
No 172
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=88.42 E-value=0.31 Score=32.19 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc---CCC----chHHHHhHHHHHH
Q psy14212 8 HPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL---NEK----NIRALYGLALSCH 60 (111)
Q Consensus 8 ~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL---~~~----~lRalyGL~l~~~ 60 (111)
.|.....+..+|.+++..| +++.|..+|.+++++ .++ ...+++.+-.+..
T Consensus 62 ~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAG---NWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 4455677888999999999 999999999999999 332 2344555444443
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=87.91 E-value=1.1 Score=31.20 Aligned_cols=46 Identities=11% Similarity=-0.117 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHH
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLA 56 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~ 56 (111)
+.++..+..+|.+++..|...|++.|+++|.+|++. ++..|+|-|-
T Consensus 47 ~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~--g~~~a~~~Lg 92 (212)
T 3rjv_A 47 QGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEA--GSKSGEIVLA 92 (212)
T ss_dssp TTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHH
Confidence 345555666666665522233666666666666543 3444444443
No 174
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.74 E-value=0.34 Score=36.15 Aligned_cols=46 Identities=15% Similarity=0.004 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhcc-----C-CCchHHHHhHHHHHHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINL-----N-EKNIRALYGLALSCHQV 62 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL-----~-~~~lRalyGL~l~~~~l 62 (111)
.+..+|.+++..| +++.|+++|.+|+++ + |...++++.+-.+...+
T Consensus 226 ~~~~lg~~y~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (383)
T 3ulq_A 226 TLYNIGLCKNSQS---QYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKL 277 (383)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHC
Confidence 5556777777777 788888888888883 4 56667777666665443
No 175
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.43 E-value=0.67 Score=34.47 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 11 NHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 11 n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
....+..+|.+++.+| ++..|.++|.+|+++.+
T Consensus 142 ~a~~~~~lg~~~~~~~---~~~~A~~~~~~al~~~~ 174 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMK---QTYFSMDYARQAYEIYK 174 (383)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHH
Confidence 4467778888888888 78888888888888855
No 176
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=86.82 E-value=0.54 Score=38.88 Aligned_cols=62 Identities=8% Similarity=0.043 Sum_probs=48.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCc-------ccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGL-------ENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~-------enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++|..+|.++-....=++++...|.. +.++.+.+.|.++++.+|++..||+-=..+..++.
T Consensus 53 ~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~ 121 (567)
T 1dce_A 53 SQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 121 (567)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS
T ss_pred HHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 578899999887766668888887731 12899999999999999999999987766665543
No 177
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=86.60 E-value=0.28 Score=35.56 Aligned_cols=48 Identities=15% Similarity=0.108 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc------hHHHHhHHHHHHHH
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN------IRALYGLALSCHQV 62 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~------lRalyGL~l~~~~l 62 (111)
...+.-+|.+++-.| +++.|+++|.+|++++++. .++++.+-.|-.++
T Consensus 196 ~~~~~nlg~~y~~~~---~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 196 VKVRYNHAKALYLDS---RYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 346678899999888 9999999999999998743 56666666665433
No 178
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.37 E-value=1.3 Score=32.97 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhc-----cCCCchHHHHhHHHHHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAIN-----LNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~ale-----L~~~~lRalyGL~l~~~~ 61 (111)
.+..+|.+++..| +++.|+.+|.+|++ -+|...++++.+-.+..+
T Consensus 224 ~~~~lg~~y~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 273 (378)
T 3q15_A 224 SLLNIANSYDRSG---DDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK 273 (378)
T ss_dssp HHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH
Confidence 4556677777666 77777777777777 555556666666655543
No 179
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=85.62 E-value=1.7 Score=31.32 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc---CCCc----hHHHHhHHHHHHH
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINL---NEKN----IRALYGLALSCHQ 61 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL---~~~~----lRalyGL~l~~~~ 61 (111)
...+..+|.+++..| +++.|..+|-+|+++ .|++ ..+++.+-.+...
T Consensus 155 ~~~~~~lg~~y~~~~---~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 155 LYIENAIANIYAENG---YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 346677888888888 889999999999844 4442 2566666665543
No 180
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=85.48 E-value=8.3 Score=27.70 Aligned_cols=48 Identities=13% Similarity=0.169 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCch----HHHHhHHHHHH
Q psy14212 10 HNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNI----RALYGLALSCH 60 (111)
Q Consensus 10 ~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~l----RalyGL~l~~~ 60 (111)
.........|++++..| +++.|+.+|.+++++.|++. ++++.+-.+..
T Consensus 7 ~~~~~l~~~g~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~ 58 (406)
T 3sf4_A 7 ASCLELALEGERLCKSG---DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF 58 (406)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH
Confidence 34555678899999999 99999999999999999874 45555555444
No 181
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=85.43 E-value=0.58 Score=33.85 Aligned_cols=46 Identities=15% Similarity=0.183 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccC-------CCchHHHHhHHHHHHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLN-------EKNIRALYGLALSCHQV 62 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~-------~~~lRalyGL~l~~~~l 62 (111)
.+..+|.+++..| +++.|..||.+|+++. +...++++.+-.+...+
T Consensus 157 ~~~~lg~~y~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 3u3w_A 157 IENAIANIYAENG---YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 4666777777777 7788888888887422 23445666666555443
No 182
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=85.11 E-value=2.5 Score=33.45 Aligned_cols=59 Identities=14% Similarity=0.038 Sum_probs=41.9
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
+++|.++|.++-.-..=++++...| .+++.+++.+..+++.+|+|.-+|+.-..+..++
T Consensus 78 ~~~L~~nP~~ytaWn~R~~iL~~l~--~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l 136 (349)
T 3q7a_A 78 EIIVRMNPAHYTVWQYRFSLLTSLN--KSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 (349)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCchhHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 4677788877766555567776665 2477788888888888888777777777666665
No 183
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=84.30 E-value=1.1 Score=34.44 Aligned_cols=62 Identities=11% Similarity=-0.063 Sum_probs=43.3
Q ss_pred ccchhcCCCCHHHHHHHHHHH----HhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADIL----YTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~----Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++|..+|.++-...-=+.++ -..|...+++.++..+.++++.+|+|-.||+--..+..++.
T Consensus 93 ~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~ 158 (306)
T 3dra_A 93 EEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFD 158 (306)
T ss_dssp HHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 467788887765444445666 44432237888999999999999998888887776666554
No 184
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=83.38 E-value=0.7 Score=34.51 Aligned_cols=37 Identities=8% Similarity=-0.104 Sum_probs=34.0
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 7 HHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 7 ~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
.+|.....+..+|.+++-.| +++.|+.+|.+++++.+
T Consensus 256 ~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 256 VPDLLPKVLFGLSWTLCKAG---QTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp CGGGHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCC
T ss_pred CChhHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHH
Confidence 67888888999999999999 99999999999999976
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=82.97 E-value=4.3 Score=26.46 Aligned_cols=47 Identities=13% Similarity=-0.012 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 10 HNHLLHQRYADILYTQ-GGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 10 ~n~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
.++.-+..+|.+++.- |...|++.|+++|.+|.+. ++..|.|-|-.+
T Consensus 55 g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 102 (138)
T 1klx_A 55 NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYK 102 (138)
T ss_dssp TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 3455566666666652 2345777777777777766 455555554433
No 186
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=82.54 E-value=2.2 Score=35.22 Aligned_cols=58 Identities=9% Similarity=-0.087 Sum_probs=45.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCc-----------ccHHHHHHHHHHHhccCCCchHHHHhHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGL-----------ENIELAISHYLMAINLNEKNIRALYGLALSC 59 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~-----------enl~~A~kyf~~aleL~~~~lRalyGL~l~~ 59 (111)
+.+|-.+|.|.-...-.+-++..+++. +.++.|+.+|.+||+++|+|--||+-+.-..
T Consensus 168 ~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll 236 (567)
T 1dce_A 168 DSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236 (567)
T ss_dssp HTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHH
T ss_pred HHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 457788998877666667788776321 5789999999999999999888888665544
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=82.52 E-value=1.5 Score=34.37 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=16.5
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhcc
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 44 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL 44 (111)
|.++..+..+|.++|...+..|++.|.++|.+|++.
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 444444555555544332333444444444444433
No 188
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=82.48 E-value=1.5 Score=37.50 Aligned_cols=54 Identities=11% Similarity=0.074 Sum_probs=35.7
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC--chHHHHhHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEK--NIRALYGLALS 58 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~--~lRalyGL~l~ 58 (111)
|..|-..|+++.+...|++.....| +.+.||..|.+|++.+|+ ....+|-.++-
T Consensus 494 e~~Lk~~p~~~~~w~~y~~fe~~~~---~~~~AR~lferal~~~~~~~~~~~lw~~~~~ 549 (679)
T 4e6h_A 494 ELGLKYFATDGEYINKYLDFLIYVN---EESQVKSLFESSIDKISDSHLLKMIFQKVIF 549 (679)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHTTTSSSTTHHHHHHHHHHH
T ss_pred HHHHHHCCCchHHHHHHHHHHHhCC---CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4455556777777777777766666 667777777777777763 55556655543
No 189
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=82.32 E-value=3.3 Score=30.27 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 9 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 9 P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
|.....+..+|.+++..| +++.|..+|.+++++++.
T Consensus 132 ~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWA---RLDEAEASARSGIEVLSS 167 (373)
T ss_dssp THHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHhhc
Confidence 455677888999999999 999999999999999874
No 190
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=81.67 E-value=2.7 Score=32.56 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhH
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGL 55 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL 55 (111)
...+..+|.+++..|..++++.|+++|.+|++. ++..|+|.|
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~L 369 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNL 369 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 344445555555443344555555555555554 334444433
No 191
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=81.63 E-value=2.7 Score=32.88 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=35.2
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQ 61 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~ 61 (111)
+++|..+|.|+-....=+-++...|. .+++.++..|.++++++|+|-.||+.-..+..+
T Consensus 98 ~~~L~~~PKny~aW~hR~wlL~~l~~-~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~ 156 (331)
T 3dss_A 98 ESCLRVNPKSYGTWHHRCWLLSRLPE-PNWARELELCARFLEADERNFHCWDYRRFVAAQ 156 (331)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHCSS-CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHhccCc-ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45666677666554444556655552 246667777777777777766666655544443
No 192
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=81.02 E-value=4.9 Score=28.83 Aligned_cols=44 Identities=11% Similarity=0.018 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc------hHHHHhHHHHHHH
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNEKN------IRALYGLALSCHQ 61 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~------lRalyGL~l~~~~ 61 (111)
+..+|.++...| +++.|..+|-+|+++.++. .++++++-.+...
T Consensus 118 ~~~~~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 118 QYYVAAYVLKKV---DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp HHHHHHHHHTSS---CHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC---CHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 445677766666 8999999999999886533 5667766665544
No 193
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=80.83 E-value=2 Score=34.70 Aligned_cols=52 Identities=17% Similarity=0.150 Sum_probs=42.7
Q ss_pred CccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCc--hHHHHhHH
Q psy14212 1 MEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKN--IRALYGLA 56 (111)
Q Consensus 1 ~EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~--lRalyGL~ 56 (111)
||.+|...|+.+-+...||...-..| +++.|++-|.+|+.. |++ ++-.|+..
T Consensus 202 ye~al~~~p~~~~lW~~ya~~~~~~~---~~~~ar~i~erAi~~-P~~~~l~~~y~~~ 255 (493)
T 2uy1_A 202 HNYILDSFYYAEEVYFFYSEYLIGIG---QKEKAKKVVERGIEM-SDGMFLSLYYGLV 255 (493)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH-CCSSHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhC-CCcHHHHHHHHhh
Confidence 46778889999999999999888777 789999999999999 954 44455543
No 194
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=80.76 E-value=8.4 Score=29.97 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=43.4
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC--CchHHHHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE--KNIRALYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~--~~lRalyGL~l~~~ 60 (111)
|+++-..|.+...+..+|.+++..| +++.|++.+.+.|+-+| +++.+..=+..+.-
T Consensus 90 ~~l~~~~~~~~~~~~~la~i~~~~g---~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L 147 (310)
T 3mv2_B 90 ENLLKDKQNSPYELYLLATAQAILG---DLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL 147 (310)
T ss_dssp HHTTTTSCCCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHcC---CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH
Confidence 4455444666777789999999998 99999999999999997 77777655544443
No 195
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.69 E-value=8.7 Score=23.27 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
..+..+|.+++..| +++.|.++|.+++++.+
T Consensus 10 ~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~~ 40 (164)
T 3ro3_A 10 RAFGNLGNTHYLLG---NFRDAVIAHEQRLLIAK 40 (164)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 46778899999998 99999999999999987
No 196
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=78.57 E-value=1.5 Score=30.36 Aligned_cols=30 Identities=20% Similarity=0.032 Sum_probs=19.5
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHhccCCCchHH
Q psy14212 19 ADILYTQGGLENIELAISHYLMAINLNEKNIRA 51 (111)
Q Consensus 19 AEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRa 51 (111)
|=-+|=.| ++..|++|+-..|+..|+|.-|
T Consensus 81 Avg~yklg---~Y~~A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 81 AVGNYRLK---EYEKALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHTT---CHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHhh---hHHHHHHHHHHHHHhCCCCHHH
Confidence 33344445 7777777777777777777544
No 197
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=76.94 E-value=2.6 Score=35.94 Aligned_cols=55 Identities=5% Similarity=-0.002 Sum_probs=40.3
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC--CchHHHHhHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE--KNIRALYGLAL 57 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~--~~lRalyGL~l 57 (111)
|..+..-|.+.-+..+|++.-...|+.++++.+++.|.++|..+| ..+. +|-.++
T Consensus 90 EraL~~fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRal~~~~~~~sv~-LW~~Yl 146 (679)
T 4e6h_A 90 DKLHDRFPLMANIWCMRLSLEFDKMEELDAAVIEPVLARCLSKELGNNDLS-LWLSYI 146 (679)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTC--CCCHHHHHHHHHHHTCSSSCCCCHH-HHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHHhcCCCCCHH-HHHHHH
Confidence 556777888888888888888877733348888889999988884 5666 666654
No 198
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=75.77 E-value=5.4 Score=31.52 Aligned_cols=61 Identities=11% Similarity=-0.023 Sum_probs=47.8
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHHh
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQ-GGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLT 64 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~~ 64 (111)
+++|..+|.|+-.-..=+.++-.. | .+.+.++..+.++++++|+|-.||+--.-+..++..
T Consensus 113 ~~~L~~nPKny~aW~hR~wlL~~l~~--~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 113 NEFAVQNLKSYQVWHHRLLLLDRISP--QDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFST 174 (349)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHCC--SCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 578899998886655446777666 4 256899999999999999999999887777766653
No 199
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=75.26 E-value=3 Score=32.35 Aligned_cols=47 Identities=13% Similarity=-0.045 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 10 HNHLLHQRYADILYTQ-GGLENIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 10 ~n~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
.++..+..+|.+++.- |...|++.|.++|.+|++.. +..|+|.|-.+
T Consensus 361 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~ 408 (490)
T 2xm6_A 361 GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEI 408 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHH
Confidence 4455566667776663 22346777777777776654 34444444333
No 200
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=75.10 E-value=0.97 Score=33.11 Aligned_cols=33 Identities=3% Similarity=-0.289 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCch
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLNEKNI 49 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~l 49 (111)
.++..+|.+++.+| ++..|+++|.+++ ++|++.
T Consensus 196 ~~~~~~g~~~~~~g---~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 196 KKCIAQVLVQLHRA---DYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHh-CCCCCC
Confidence 36677788888888 9999999999999 999654
No 201
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=74.80 E-value=1.4 Score=34.84 Aligned_cols=44 Identities=20% Similarity=0.092 Sum_probs=39.3
Q ss_pred CccchhcCCCC-HHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCCC
Q psy14212 1 MEELFLHHPHN-HLLHQRYADILYTQ-GGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 1 ~EEvlL~~P~n-~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~~ 47 (111)
||..|-++|+. .-.+..|||.++.. | +.+.|++++-+|+...|.
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~g---d~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLN---NRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTT---CHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcC---CHHHHHHHHHHHHcCCCC
Confidence 46789999975 99999999999885 6 899999999999999886
No 202
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=74.47 E-value=2.3 Score=32.69 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHhccCCCchHHHHhHH
Q psy14212 30 NIELAISHYLMAINLNEKNIRALYGLA 56 (111)
Q Consensus 30 nl~~A~kyf~~aleL~~~~lRalyGL~ 56 (111)
|...|+++|.++++++|+..-||-|+.
T Consensus 21 d~~~A~~~F~~a~~~dP~~~Daw~g~~ 47 (282)
T 4f3v_A 21 SEARSLDLFTEITNYDESACDAWIGRI 47 (282)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhChhhhHHHHhHH
Confidence 899999999999999999999999994
No 203
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=73.68 E-value=5.6 Score=31.06 Aligned_cols=62 Identities=8% Similarity=0.045 Sum_probs=46.1
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCC---c----ccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGG---L----ENIELAISHYLMAINLNEKNIRALYGLALSCHQVL 63 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg---~----enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l~ 63 (111)
+++|.++|.++-.-..=++++-..|. . +.++.+...+..+++.+|+|.-+|+.=..+..++.
T Consensus 54 ~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~ 122 (331)
T 3dss_A 54 SQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 122 (331)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCS
T ss_pred HHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccC
Confidence 56899999886654444666665552 1 13889999999999999999999987766665543
No 204
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=73.64 E-value=5.6 Score=31.03 Aligned_cols=39 Identities=5% Similarity=-0.011 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRAL 52 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRal 52 (111)
.+..+|.++...|..++.+.|+++|.++++..|....++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~ 216 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRV 216 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHH
Confidence 555666666666555566666666666666666555543
No 205
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=72.49 E-value=2.1 Score=31.11 Aligned_cols=30 Identities=30% Similarity=0.373 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
...-+|+.+|..| ++..|.++|.+||.++.
T Consensus 65 ~l~~ladalf~~~---eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 65 LLVYHADSLFHDK---EYRNAVSKYTMALQQKK 94 (167)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccc---HHHHHHHHHHHHHHHHH
Confidence 4456899999998 99999999999998876
No 206
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=70.94 E-value=16 Score=22.54 Aligned_cols=51 Identities=12% Similarity=-0.019 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC-------CchHHHHhHHHHHHHHH
Q psy14212 10 HNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE-------KNIRALYGLALSCHQVL 63 (111)
Q Consensus 10 ~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~-------~~lRalyGL~l~~~~l~ 63 (111)
-++.-+..+|.++|-.| ++..|...|..|+++.+ .....++-|..|..++.
T Consensus 3 Lsa~dc~~lG~~~~~~~---~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g 60 (104)
T 2v5f_A 3 LTAEDCFELGKVAYTEA---DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG 60 (104)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcc---chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc
Confidence 45666789999999999 99999999999999752 33444555555554433
No 207
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=67.04 E-value=9.8 Score=24.66 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHhccCC
Q psy14212 10 HNHLLHQRYADILYTQ-GGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 10 ~n~~~h~rlAEi~Yt~-Gg~enl~~A~kyf~~aleL~~ 46 (111)
.++.-+..+|.++..- |...|++.|+++|.+|.++.+
T Consensus 91 g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 91 NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 4566677889888874 345699999999999999854
No 208
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=58.34 E-value=43 Score=23.42 Aligned_cols=64 Identities=13% Similarity=-0.019 Sum_probs=47.6
Q ss_pred chhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC-C-CchHHHHhHHHHHHHHHhhhh
Q psy14212 4 LFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLN-E-KNIRALYGLALSCHQVLTSAK 67 (111)
Q Consensus 4 vlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~-~-~~lRalyGL~l~~~~l~~~~k 67 (111)
.+-..|.+.-..-+||=.+--....+++..+++.|..+++.. | ++.-++|-|-+..-++.+..+
T Consensus 24 e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 24 EKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 344456677777777777776666668889999999999988 6 677889988888876655433
No 209
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=54.71 E-value=16 Score=27.89 Aligned_cols=50 Identities=10% Similarity=-0.150 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC--CC-chHHHHhHHHHHHHHHhh
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLN--EK-NIRALYGLALSCHQVLTS 65 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~--~~-~lRalyGL~l~~~~l~~~ 65 (111)
-.|.-+|.++-..| +++.|..+|.++++-. |. ..-++|-.-+|-.++...
T Consensus 172 ~a~~~LG~al~~LG---~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 172 AAGVAHGVAAANLA---LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 36788888888888 8899999999998655 54 566777777777766654
No 210
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=54.37 E-value=17 Score=26.34 Aligned_cols=29 Identities=24% Similarity=0.274 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
+..+|.++...| +++.|+.+|.+++++.+
T Consensus 96 ~~~la~~~~~~G---~~~~A~~~~~~al~~~~ 124 (373)
T 1hz4_A 96 LIQQSEILFAQG---FLQTAWETQEKAFQLIN 124 (373)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHHH
Confidence 567899999999 99999999999999874
No 211
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=53.39 E-value=16 Score=25.75 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=20.6
Q ss_pred HHHHHhcCCcccHHHHHHHHHHHhccCCCchHH
Q psy14212 19 ADILYTQGGLENIELAISHYLMAINLNEKNIRA 51 (111)
Q Consensus 19 AEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRa 51 (111)
|=-+|=+| |+..|++|=-..++..|+|.-|
T Consensus 84 Avg~ykl~---~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 84 TIGCYKLG---EYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp HHHHHTTT---CHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHhh---hHHHHHHHHHHHHhcCCCcHHH
Confidence 33355555 7888888887888888877654
No 212
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=48.58 E-value=18 Score=25.22 Aligned_cols=21 Identities=10% Similarity=-0.005 Sum_probs=12.3
Q ss_pred cHHHHHHHHHHHhccCCCchH
Q psy14212 30 NIELAISHYLMAINLNEKNIR 50 (111)
Q Consensus 30 nl~~A~kyf~~aleL~~~~lR 50 (111)
++..|++|=-..++..|+|.=
T Consensus 93 dY~~Ar~y~d~lL~~eP~N~Q 113 (134)
T 3o48_A 93 EYSMAKRYVDTLFEHERNNKQ 113 (134)
T ss_dssp CHHHHHHHHHHHHTTCTTCHH
T ss_pred hHHHHHHHHHHHHhhCCCCHH
Confidence 566666666666666665543
No 213
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=46.62 E-value=12 Score=30.80 Aligned_cols=38 Identities=18% Similarity=0.091 Sum_probs=23.5
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhc
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAIN 43 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~ale 43 (111)
.++..+|.+...|..+|=+.-..| |.-.|.-||.||+-
T Consensus 177 ~A~~~~P~~G~~~nqLavla~~~~---~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 177 HAAQLVPSNGQPYNQLAILASSKG---DHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHCTTBSHHHHHHHHHHHHTT---CHHHHHHHHHHHHS
T ss_pred HHHHhCCCCCchHHHHHHHHhccc---ccHHHHHHHHHHHh
Confidence 345566666666666666666555 55556666666654
No 214
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=42.76 E-value=14 Score=29.62 Aligned_cols=30 Identities=10% Similarity=0.015 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
.....+|.++..+| +++.|.++|.+|+++-
T Consensus 383 ~~l~nLa~~~~~qg---~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 383 SMWLKLGRLYMGLE---NKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc---CHHHHHHHHHHHHHHH
Confidence 34668999999999 9999999999998753
No 215
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=42.40 E-value=24 Score=27.50 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHhcCCcccHHHHHHHHHHH
Q psy14212 11 NHLLHQRYADILYTQGGLENIELAISHYLMA 41 (111)
Q Consensus 11 n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~a 41 (111)
++-+|.-+|++++.-| ++..|++||-.+
T Consensus 133 dp~LH~~~a~~~~~e~---~~~~A~~H~i~~ 160 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGD---FVYEAERYFMLG 160 (312)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHhhcC---CHHHHHHHHHhC
Confidence 6789999999999987 999999999643
No 216
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=41.19 E-value=49 Score=26.35 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=28.1
Q ss_pred CCCCHHH---HHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 8 HPHNHLL---HQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 8 ~P~n~~~---h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
-|+++.. ..-+|.++..+| +++.|..+|-+|++.-
T Consensus 333 g~~Hp~~a~~~~nLa~~y~~~g---~~~eA~~~~~~aL~i~ 370 (433)
T 3qww_A 333 EDSNVYMLHMMYQAMGVCLYMQ---DWEGALKYGQKIIKPY 370 (433)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred ChhchHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHH
Confidence 4555543 456899999999 9999999999999864
No 217
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.22 E-value=83 Score=22.92 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=26.6
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
...+|++++..| +++.|..+|-+++++.+.
T Consensus 58 l~~l~~~y~~~~---~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 58 ILELGQLYVTMG---AKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp HHHHHHHHHHHT---CHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHHHH
Confidence 467899999999 899999999999998764
No 218
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=38.96 E-value=29 Score=27.51 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhcCCcccHHHHHHHHH
Q psy14212 11 NHLLHQRYADILYTQGGLENIELAISHYL 39 (111)
Q Consensus 11 n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~ 39 (111)
++-+|..+|++++.-| ++..|.+||-
T Consensus 135 dp~LH~~ig~~~~~e~---~~~~Ae~H~i 160 (336)
T 3lpz_A 135 DPELHHVVGTLYVEEG---EFEAAEKHLV 160 (336)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHT
T ss_pred CHHHHHHHHHHHHccC---CHHHHHHHHH
Confidence 5789999999999987 8999999995
No 219
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=38.59 E-value=17 Score=29.53 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
..+..+|.+++.+| +++.|..+|.+|+++-
T Consensus 394 ~~l~nLa~~~~~~G---~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 394 MAVMRAGLTNWHAG---HIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC---CHHHHHHHHHHHHHHH
Confidence 34667999999999 9999999999999864
No 220
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=36.24 E-value=51 Score=23.75 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCC
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNEK 47 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~ 47 (111)
..+|.-+|+---.+| |+..|||-.-+||.+||+
T Consensus 94 AKiwi~~AqFEiRqg---nl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 94 AFVHISFAQFELSQG---NVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHcc---cHHHHHHHHHHHhccCCC
Confidence 445555555555566 677777777777777765
No 221
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=35.79 E-value=17 Score=28.73 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC---CchHHHHhHHHHHH
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLNE---KNIRALYGLALSCH 60 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~---~~lRalyGL~l~~~ 60 (111)
.+..+|+.++-.| ++..|.+.|++..+.|. .-+-.++++.-++-
T Consensus 133 ~~~~la~~~~~~G---d~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l 179 (429)
T 4b4t_R 133 AWINLGEYYAQIG---DKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF 179 (429)
T ss_dssp CCHHHHHHHHHHC---CCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 3678999999999 89999999999999885 45667777665553
No 222
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=32.93 E-value=62 Score=26.18 Aligned_cols=29 Identities=14% Similarity=-0.079 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
...-+|.++..+| +++.|..+|.+|++.-
T Consensus 353 ~~~nLa~~y~~~g---~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 353 LLSIASEVLSYLQ---AYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 4566899999999 9999999999999875
No 223
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=32.91 E-value=89 Score=25.64 Aligned_cols=40 Identities=23% Similarity=0.078 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhH
Q psy14212 13 LLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGL 55 (111)
Q Consensus 13 ~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL 55 (111)
.....+||+.==.+ ....|+.||.+|+.++|++-|.+-=|
T Consensus 153 r~l~~LGDL~RY~~---~~~~A~~~Y~~A~~~~P~~G~~~nqL 192 (497)
T 1ya0_A 153 HCLVHLGDIARYRN---QTSQAESYYRHAAQLVPSNGQPYNQL 192 (497)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTBSHHHHHH
T ss_pred HHHHHcccHHHHHH---HHHHHHHHHHHHHHhCCCCCchHHHH
Confidence 34456677632222 57899999999999999755554433
No 224
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.29 E-value=84 Score=22.88 Aligned_cols=32 Identities=13% Similarity=0.115 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCC
Q psy14212 12 HLLHQRYADILYTQGGLENIELAISHYLMAINLNE 46 (111)
Q Consensus 12 ~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~ 46 (111)
...+.++|.+++..| ++..|.+++..++..+.
T Consensus 135 ~~~~~~la~~~~~~g---~~~~A~~~l~~~~~~~~ 166 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKK---QYKDSLALINDLLREFK 166 (434)
T ss_dssp HHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcc---ChHHHHHHHHHHHHHHH
Confidence 457788999999998 88999999998887653
No 225
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=31.65 E-value=34 Score=21.61 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
-|.++|-=+-..| |++.|+.||..+++.-
T Consensus 14 e~~k~ARe~Al~G---nYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 14 ENVKLAREYALLG---NYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHHHHHHHT---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---ChHHHHHHHHHHHHHH
Confidence 3555565555567 9999999999887643
No 226
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=29.38 E-value=30 Score=27.34 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHhcc
Q psy14212 14 LHQRYADILYTQGGLENIELAISHYLMAINL 44 (111)
Q Consensus 14 ~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL 44 (111)
....+|-++..+| +++.|.++|.+|+++
T Consensus 373 ~l~nLa~~~~~~g---~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 373 QVMKVGKLQLHQG---MFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 3557888988888 899999999999875
No 227
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=27.70 E-value=56 Score=25.26 Aligned_cols=56 Identities=16% Similarity=0.244 Sum_probs=45.6
Q ss_pred ccchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHH--HHhHHHHHH
Q psy14212 2 EELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRA--LYGLALSCH 60 (111)
Q Consensus 2 EEvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRa--lyGL~l~~~ 60 (111)
++-|-.+|.|.-.-..|-+++...| +++.|.+.--.+.+|+|+..-. +|.=.+-+-
T Consensus 21 ~~~VR~~P~da~~R~~LfqLLcv~G---~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE 78 (273)
T 1zbp_A 21 IEAIKASPKDASLRSSFIELLCIDG---DFERADEQLMQSIKLFPEYLPGASQLRHLVKAA 78 (273)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHH
Confidence 3456789999999999999999999 9999999999999999976543 554443333
No 228
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=27.65 E-value=1.1e+02 Score=25.10 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccCCCchHHHHhHHHHHHHH
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQV 62 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~~~~lRalyGL~l~~~~l 62 (111)
..++|++++-+| +++.|..-|.++ ++++.|=.+.-+|-.+
T Consensus 151 ~~~LA~~L~~Lg---~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~ 190 (449)
T 1b89_A 151 FGRLASTLVHLG---EYQAAVDGARKA-----NSTRTWKEVCFACVDG 190 (449)
T ss_dssp HHHHHHHHHTTT---CHHHHHHHHHHH-----TCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc---cHHHHHHHHHHc-----CCchhHHHHHHHHHHc
No 229
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=26.86 E-value=80 Score=24.32 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=23.0
Q ss_pred HHHHHH--HHhcCCcccHHHHHHHHHHHhccCCC--chHHHHh
Q psy14212 16 QRYADI--LYTQGGLENIELAISHYLMAINLNEK--NIRALYG 54 (111)
Q Consensus 16 ~rlAEi--~Yt~Gg~enl~~A~kyf~~aleL~~~--~lRalyG 54 (111)
..++|. ....|| +.+..|...|....+-.|+ ....+|+
T Consensus 178 ~~Laea~v~l~~g~-~~~q~A~~~f~El~~~~p~~~~~~lLln 219 (310)
T 3mv2_B 178 LNLAESYIKFATNK-ETATSNFYYYEELSQTFPTWKTQLGLLN 219 (310)
T ss_dssp HHHHHHHHHHHHTC-STTTHHHHHHHHHHTTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-ccHHHHHHHHHHHHHhCCCcccHHHHHH
Confidence 344444 444444 3567777777777777665 5566676
No 230
>2vj4_A Protein MXIC, MXIC; secretion regulation, transport protein, T3SS, virulence, TR type three secretion system; HET: MLY; 2.50A {Shigella flexneri} PDB: 2vix_A* 2vj5_A
Probab=25.56 E-value=27 Score=27.23 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHHhccCCCchHHHHhHHHH
Q psy14212 30 NIELAISHYLMAINLNEKNIRALYGLALS 58 (111)
Q Consensus 30 nl~~A~kyf~~aleL~~~~lRalyGL~l~ 58 (111)
|+..+=|.|+..+.++|..+|.+|==.++
T Consensus 101 Nial~Ar~F~~~~~~s~~~LR~~YR~fv~ 129 (294)
T 2vj4_A 101 NSAIQAXLFGNXMXLEPQLLRACYRGFIM 129 (294)
T ss_dssp HTHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhhhhcCCHHHHHHHHHHHHh
Confidence 77888888999999999999999976665
No 231
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=25.55 E-value=55 Score=25.83 Aligned_cols=35 Identities=14% Similarity=-0.049 Sum_probs=27.2
Q ss_pred CCCCHH---HHHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 8 HPHNHL---LHQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 8 ~P~n~~---~h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
-|+++. ...-+|.++..+| +++.|..+|.++++.-
T Consensus 322 g~~h~~~~~~~~~L~~~y~~~g---~~~eA~~~~~~~L~i~ 359 (429)
T 3qwp_A 322 PDINIYQLKVLDCAMDACINLG---LLEEALFYGTRTMEPY 359 (429)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhH
Confidence 455543 3455788888888 9999999999999875
No 232
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=22.91 E-value=56 Score=22.55 Aligned_cols=28 Identities=39% Similarity=0.351 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHhccC
Q psy14212 15 HQRYADILYTQGGLENIELAISHYLMAINLN 45 (111)
Q Consensus 15 h~rlAEi~Yt~Gg~enl~~A~kyf~~aleL~ 45 (111)
+.|-|+++..-| |++.|...|-+.+.|.
T Consensus 43 llr~A~~y~~eg---d~e~AYily~R~~~L~ 70 (146)
T 2xze_A 43 IIRMASIYSEEG---NIEHAFILYNKYITLF 70 (146)
T ss_dssp HHHHHHHHHHHT---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHH
Confidence 345577777777 9999999999977655
No 233
>3enp_A TP53RK-binding protein; keops complex telomere kinase regulator, nucleus, hydrolase; 2.48A {Homo sapiens}
Probab=22.00 E-value=50 Score=23.59 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=20.0
Q ss_pred HHHHHhcCCcccHHHHHHHHHH
Q psy14212 19 ADILYTQGGLENIELAISHYLM 40 (111)
Q Consensus 19 AEi~Yt~Gg~enl~~A~kyf~~ 40 (111)
.||.|...|..|+..|.|.|--
T Consensus 79 sEIl~~LSp~~nI~eAlkrfGI 100 (177)
T 3enp_A 79 TEIIFNLSPNNNISEALKKFGI 100 (177)
T ss_dssp HHHHHHHCSSSCHHHHHHHHBC
T ss_pred HHHhhhhCccccHHHHHHHhCC
Confidence 7999999999999999999863
No 234
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=21.18 E-value=48 Score=20.87 Aligned_cols=15 Identities=27% Similarity=0.341 Sum_probs=12.7
Q ss_pred cHHHHHHHHHHHhcc
Q psy14212 30 NIELAISHYLMAINL 44 (111)
Q Consensus 30 nl~~A~kyf~~aleL 44 (111)
+++.|..+|..+|++
T Consensus 31 ~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 31 RYPQALVCYQEGIDL 45 (86)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 888899999888874
No 235
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=21.08 E-value=83 Score=24.32 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=33.1
Q ss_pred cchhcCCCCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHh-------ccCC-CchHHHHhHHH
Q psy14212 3 ELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAI-------NLNE-KNIRALYGLAL 57 (111)
Q Consensus 3 EvlL~~P~n~~~h~rlAEi~Yt~Gg~enl~~A~kyf~~al-------eL~~-~~lRalyGL~l 57 (111)
.++-..|.+--.|..+-..+|-.| +-..|+..|.+.- -+.| .-+|++|--++
T Consensus 196 ~~~~~~P~~E~~~~~lm~al~~~G---r~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il 255 (388)
T 2ff4_A 196 ALTFEHPYREPLWTQLITAYYLSD---RQSDALGAYRRVKTTLADDLGIDPGPTLRALNERIL 255 (388)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 345677888888888888888887 5556665555432 3334 35677764433
No 236
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=20.77 E-value=1.9e+02 Score=19.07 Aligned_cols=14 Identities=36% Similarity=0.441 Sum_probs=6.9
Q ss_pred cHHHHHHHHHHHhc
Q psy14212 30 NIELAISHYLMAIN 43 (111)
Q Consensus 30 nl~~A~kyf~~ale 43 (111)
+++.|+.+|..+|+
T Consensus 33 ~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 33 NYEEALQLYQHAVQ 46 (117)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 44555555555444
Done!