Query psy14217
Match_columns 529
No_of_seqs 224 out of 1739
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 22:24:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14217.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14217hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2067|consensus 100.0 5.3E-84 1.1E-88 607.6 35.5 450 60-525 21-471 (472)
2 KOG0960|consensus 100.0 9.1E-64 2E-68 470.3 38.8 430 61-513 31-463 (467)
3 COG0612 PqqL Predicted Zn-depe 100.0 3.1E-53 6.7E-58 441.1 42.1 415 61-504 14-436 (438)
4 PRK15101 protease3; Provisiona 100.0 3.5E-46 7.7E-51 424.2 40.4 410 58-499 38-462 (961)
5 TIGR02110 PQQ_syn_pqqF coenzym 100.0 1.5E-45 3.2E-50 390.8 41.9 332 66-433 2-346 (696)
6 COG1025 Ptr Secreted/periplasm 100.0 3.9E-38 8.5E-43 330.7 37.8 411 58-499 18-441 (937)
7 KOG2583|consensus 100.0 2.1E-35 4.6E-40 279.9 36.9 403 65-508 24-429 (429)
8 PTZ00432 falcilysin; Provision 100.0 1.3E-35 2.8E-40 334.5 39.5 402 64-492 92-565 (1119)
9 KOG0959|consensus 100.0 3.6E-34 7.9E-39 306.3 37.1 406 59-497 23-444 (974)
10 PRK15101 protease3; Provisiona 100.0 1.2E-33 2.7E-38 321.6 38.7 421 35-500 496-930 (961)
11 COG1026 Predicted Zn-dependent 100.0 1.1E-26 2.3E-31 245.8 31.7 394 68-491 26-448 (978)
12 KOG2019|consensus 99.9 9.3E-24 2E-28 212.0 28.1 402 70-500 60-497 (998)
13 KOG0961|consensus 99.9 6.5E-21 1.4E-25 191.5 29.4 403 62-497 16-453 (1022)
14 PF00675 Peptidase_M16: Insuli 99.9 2.2E-22 4.7E-27 177.6 14.6 147 74-223 1-148 (149)
15 PF05193 Peptidase_M16_C: Pept 99.9 1.3E-21 2.8E-26 178.5 17.3 181 229-433 1-184 (184)
16 COG1025 Ptr Secreted/periplasm 99.9 2.3E-19 5E-24 189.9 35.3 419 34-498 474-908 (937)
17 KOG0959|consensus 99.8 1.9E-16 4E-21 170.9 34.3 420 35-488 482-909 (974)
18 COG1026 Predicted Zn-dependent 99.8 2.6E-16 5.5E-21 167.6 30.2 395 65-498 528-957 (978)
19 PTZ00432 falcilysin; Provision 99.8 4.3E-16 9.2E-21 176.8 30.6 398 68-502 664-1106(1119)
20 KOG2019|consensus 99.7 7.8E-14 1.7E-18 141.3 29.2 390 65-498 562-984 (998)
21 KOG0961|consensus 99.1 6.7E-09 1.5E-13 106.0 20.3 402 81-517 559-1001(1022)
22 PF03410 Peptidase_M44: Protei 97.9 0.00016 3.6E-09 71.8 13.1 183 67-274 2-192 (590)
23 TIGR02110 PQQ_syn_pqqF coenzym 97.9 0.0013 2.8E-08 71.5 20.6 165 318-499 20-194 (696)
24 COG0612 PqqL Predicted Zn-depe 97.8 0.00036 7.8E-09 72.9 15.2 177 320-513 39-221 (438)
25 PHA03081 putative metalloprote 97.6 0.00037 8E-09 69.4 10.4 186 67-274 2-192 (595)
26 PF08367 M16C_assoc: Peptidase 97.3 0.0061 1.3E-07 58.3 13.7 114 70-187 76-201 (248)
27 PF00675 Peptidase_M16: Insuli 96.0 0.32 7E-06 42.2 14.4 125 318-458 11-137 (149)
28 KOG0960|consensus 94.7 0.2 4.3E-06 49.5 9.0 106 393-500 116-224 (467)
29 KOG2067|consensus 94.0 0.16 3.5E-06 50.2 7.0 147 370-525 90-258 (472)
30 PF05193 Peptidase_M16_C: Pept 80.7 18 0.0004 31.6 10.3 108 72-185 67-184 (184)
31 PF09851 SHOCT: Short C-termin 73.0 4.2 9E-05 24.8 2.5 23 412-434 6-30 (31)
32 PF08367 M16C_assoc: Peptidase 60.7 1.5E+02 0.0033 28.0 11.9 116 318-441 90-210 (248)
33 KOG1374|consensus 59.8 25 0.00055 35.0 6.2 156 354-512 142-325 (448)
34 PF09186 DUF1949: Domain of un 59.5 55 0.0012 22.5 7.3 49 120-168 5-53 (56)
35 KOG2583|consensus 40.5 4.2E+02 0.009 27.0 15.3 175 319-513 43-222 (429)
36 COG0593 DnaA ATPase involved i 34.8 2.8E+02 0.0062 28.5 9.5 128 393-526 236-376 (408)
37 COG3735 Uncharacterized protei 24.9 6.6E+02 0.014 24.6 9.8 107 405-518 174-294 (299)
38 cd08779 Death_PIDD Death Domai 24.8 3.1E+02 0.0068 21.1 6.2 78 402-486 4-85 (86)
39 cd04914 ACT_AKi-DapG-BS_1 ACT 23.0 2.3E+02 0.005 20.5 4.9 49 124-173 17-65 (67)
40 cd04922 ACT_AKi-HSDH-ThrA_2 AC 22.6 2.2E+02 0.0048 19.9 4.9 46 124-169 19-65 (66)
41 COG5023 Tubulin [Cytoskeleton] 22.6 59 0.0013 32.5 2.1 139 354-498 140-305 (443)
42 cd04916 ACT_AKiii-YclM-BS_2 AC 21.4 2.5E+02 0.0054 19.6 4.9 46 125-170 20-66 (66)
No 1
>KOG2067|consensus
Probab=100.00 E-value=5.3e-84 Score=607.56 Aligned_cols=450 Identities=57% Similarity=0.944 Sum_probs=430.4
Q ss_pred CCCCeEEEEcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeE
Q psy14217 60 NDRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDC 139 (529)
Q Consensus 60 ~~~~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~ 139 (529)
...+.+.++|+||++|..+++.++.+++++++++|+++|.....|++|++|+|+|++|.++++. ++...||.+||.++|
T Consensus 21 ~~~~~kvttL~NGlkvase~~pg~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~-ei~~~LE~~GGn~~c 99 (472)
T KOG2067|consen 21 EPSNTKVTTLPNGLKVASENTPGQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSK-EILAELEKLGGNCDC 99 (472)
T ss_pred ccccceeeecCCccEEeccCCCCCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHH-HHHHHHHHhCCcccc
Confidence 4567899999999999999999999999999999999999999999999999999999999776 999999999999999
Q ss_pred eeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCC
Q psy14217 140 LSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219 (529)
Q Consensus 140 ~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~ 219 (529)
++++|.+.|.+++.+++++.++++|+|.+.+|.|++++++.+|..+..|++..-.+| +..+.+++|.++|.++++|.+
T Consensus 100 qsSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~P--e~lL~e~iH~Aay~~ntlg~p 177 (472)
T KOG2067|consen 100 QSSRETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRP--EPLLTEMIHSAAYSGNTLGLP 177 (472)
T ss_pred cccHhhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCc--hhhHHHHHHHHHhccCccccc
Confidence 999999999999999999999999999999999999999999999999999998888 689999999999999999999
Q ss_pred CCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEecCCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCc
Q psy14217 220 KLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGG 299 (529)
Q Consensus 220 ~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (529)
.+|+.+.+++|+.+.|.+|.+++|+|.+|+++.+|++||++++.+++||+++|.. ..|+++..+++|+|+
T Consensus 178 l~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~----------~~p~i~~~~aQYtGG 247 (472)
T KOG2067|consen 178 LLCPEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPST----------KVPPIDESKAQYTGG 247 (472)
T ss_pred ccCChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCcc----------CCCCcccchhhcccc
Confidence 9999999999999999999999999999999999999999999999999996543 145666678999999
Q ss_pred eeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEE
Q psy14217 300 IVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA 379 (529)
Q Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~ 379 (529)
...++++.+...+ .++.+||.++|++++|+++|++++.+|+.+||||++||||||||||+||||.++.++++|.|+|
T Consensus 248 ~~~~~~d~~~~~~---g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sc 324 (472)
T KOG2067|consen 248 ELKIDTDAPQVTG---GPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSC 324 (472)
T ss_pred ccccCCCCccccC---ccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHh
Confidence 9888877765442 2378999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcC
Q psy14217 380 TAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATG 459 (529)
Q Consensus 380 ~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~ 459 (529)
.|+++.|.|+|+|+|++++.|+.+.+++..+.+++-.+..+++++|++|||+++++.+.+++|+....++++++|++..|
T Consensus 325 tAfnhsy~DtGlfgi~~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g 404 (472)
T KOG2067|consen 325 TAFNHSYSDTGLFGIYASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG 404 (472)
T ss_pred hhhhccccCCceeEEeccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHccCCHHHHHHHHHHhccCCCeEEEEcCCCCCCCHHHHHHHhh-cCCCCCcceeec
Q psy14217 460 HRKRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARGELINFPSYEDIHSGIQ-NNGVLPRKGRIS 525 (529)
Q Consensus 460 ~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~v~G~~~~ip~~~~~~~~~~-~~~~~~~~~~~~ 525 (529)
.+..++++++.|+++|++||+++++++|..+++++..||.+.+|+++.|.++++ +||+|+|+|+||
T Consensus 405 ~rk~p~e~~~~Ie~lt~~DI~rva~kvlt~~p~va~~Gd~~~lpt~~~i~~~~~~~d~~l~r~~~lf 471 (472)
T KOG2067|consen 405 ERKPPDEFIKKIEQLTPSDISRVASKVLTGKPSVAAFGDGTGLPTYDHIGNAVSSGDGRLLRTYGLF 471 (472)
T ss_pred CcCCHHHHHHHHHhcCHHHHHHHHHHHhcCCceeccCCcccCCcchhhhhhhcccCcchhhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999998
No 2
>KOG0960|consensus
Probab=100.00 E-value=9.1e-64 Score=470.25 Aligned_cols=430 Identities=33% Similarity=0.549 Sum_probs=392.5
Q ss_pred CCCeEEEEcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEe
Q psy14217 61 DRNTQVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCL 140 (529)
Q Consensus 61 ~~~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~ 140 (529)
.|+.++++|+||++|..+++....+++++++++||++|.+++.|.+||||||+|+|+.+. +...+..+++.+|+.+|++
T Consensus 31 ~P~t~vttL~NGlrVaTE~~~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~R-s~~alElEieniGahLNAy 109 (467)
T KOG0960|consen 31 VPETEVTTLPNGLRVATEHNSASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNR-SQAALELEIENIGAHLNAY 109 (467)
T ss_pred CCcceEEEcCCCcEEEeccCCCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcc-hhHHHHHHHHHHHHHhccc
Confidence 466799999999999999887799999999999999999999999999999999999994 7789999999999999999
Q ss_pred eccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCC
Q psy14217 141 SSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK 220 (529)
Q Consensus 141 t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 220 (529)
|+++.|.|.+++.++++++++++|+|++.+..+.+.+++++|+.+++|++....+. ....+++||..+|.++|+++..
T Consensus 110 tSReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~--~eVVfdhLHatafQgtPL~~ti 187 (467)
T KOG0960|consen 110 TSREQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNH--QEVVFDHLHATAFQGTPLGRTI 187 (467)
T ss_pred ccccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999887764 5899999999999999999999
Q ss_pred CCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCc
Q psy14217 221 LCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGG 299 (529)
Q Consensus 221 ~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (529)
.|+.++|++|+++||++|.+.||.+.+|+++.+| ++|+++.+++++||++++.. +... .++.. .++.+.|.
T Consensus 188 lGp~enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~-~~~~-----~~~~~--~~~~Ftgs 259 (467)
T KOG0960|consen 188 LGPSENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKL-QTGD-----KVPLV--PPARFTGS 259 (467)
T ss_pred cChhhhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCccc-ccCc-----CCCCC--CCccccCc
Confidence 9999999999999999999999999999999999 99999999999999998742 1111 11221 24567888
Q ss_pred eeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEE
Q psy14217 300 IVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA 379 (529)
Q Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~ 379 (529)
+++...+. -+.++++++.+|++|.++|+.++.|.++|+|+...+- |.|....|+|-+.+-+. +++.+.
T Consensus 260 EvR~rdd~---------lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~--g~g~~~~s~La~~~~~~-~l~~sf 327 (467)
T KOG0960|consen 260 EVRVRDDD---------LPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTE--GGGRNLSSRLAQKIQQD-QLCHSF 327 (467)
T ss_pred eeeecCCC---------CchhheeeeEecCCcCCccHHHHHHHHHHhhhhhccc--CCccCCccHHHHHHHHH-HHHHHH
Confidence 88877653 1468999999999999999999999999999865543 44566779999988776 789999
Q ss_pred EEeccccCCcccEEEEEEe-CCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhc
Q psy14217 380 TAYNHAYADTGLFCIHASA-PPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLAT 458 (529)
Q Consensus 380 ~a~~~~~~~~g~f~i~~~~-~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~ 458 (529)
.+|+..|.++|+|++|+.| ++..+++++..+.+++.++...+|+.|++|||++++.++...++.....+++++++++..
T Consensus 328 qsFnt~YkDTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~ 407 (467)
T KOG0960|consen 328 QSFNTSYKDTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTY 407 (467)
T ss_pred hhhhcccccccceeEEEEecChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhc
Confidence 9999999999999999999 888999999999999999987899999999999999999999999988999999999999
Q ss_pred CCCCChhHHHHHHccCCHHHHHHHHHHhccC-CCeEEEEcCCCCCCCHHHHHHHhh
Q psy14217 459 GHRKRPSTYIESIENVTEDDIRRVASRLLTS-QPSVAARGELINFPSYEDIHSGIQ 513 (529)
Q Consensus 459 ~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~-~~~~~v~G~~~~ip~~~~~~~~~~ 513 (529)
|...++.++.+.|++||.+||++++.+|+-. +..++.+|+++.+|+|+.|+..|.
T Consensus 408 Grri~l~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie~lpdy~~irs~m~ 463 (467)
T KOG0960|consen 408 GRRIPLAELEARIDAVTAKDVREVASKYIYDKDIAIAAVGPIEGLPDYNRIRSGMS 463 (467)
T ss_pred CCcCChHHHHHHHhhccHHHHHHHHHHHhhcCCcceeeecccccCchHHHHhccch
Confidence 9999999999999999999999999999865 789999999999999999998775
No 3
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=3.1e-53 Score=441.07 Aligned_cols=415 Identities=28% Similarity=0.463 Sum_probs=359.5
Q ss_pred CCCeEEEEcCCCCEEEEeecC-CCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeE
Q psy14217 61 DRNTQVTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDC 139 (529)
Q Consensus 61 ~~~~~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~ 139 (529)
..+++.++|+||+++++.+.+ .+.+++.+++++|+++|++...|+||++|||+|+|+.++++. ++.+.++..|+..|+
T Consensus 14 ~~~~~~~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~-~i~~~~~~~G~~~na 92 (438)
T COG0612 14 LPGLQVFTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSA-ELAEAFEKLGGQLNA 92 (438)
T ss_pred cccceEEEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChH-HHHHHHHHhcCeeec
Confidence 344899999999999987776 699999999999999999999999999999999999987554 899999999999999
Q ss_pred eeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCC
Q psy14217 140 LSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLP 219 (529)
Q Consensus 140 ~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~ 219 (529)
+|+.+.|.|.+++.+++++.+|++++|++.+|.|++++|+++|+.+++|+++..++| ...+.+.+...+|++||++++
T Consensus 93 ~ts~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p--~~~~~~~l~~~~~~~~p~~~~ 170 (438)
T COG0612 93 FTSFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDP--DDLAFERLLEALYGNHPLGRP 170 (438)
T ss_pred cccchhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCc--hHHHHHHHHHHhhccCCCCCC
Confidence 999999999999889999999999999999999999999999999999999999988 589999999999999999999
Q ss_pred CCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccC
Q psy14217 220 KLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTG 298 (529)
Q Consensus 220 ~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (529)
.+|+.++|++++.++|++||++||+|+||+|+||| ++++++.++++++|+.++.. .+ +......+.....
T Consensus 171 ~~G~~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~---~~------~~~~~~~~~~~~~ 241 (438)
T COG0612 171 ILGTEESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGA---AP------PPKIPPEPPLGPE 241 (438)
T ss_pred CCCCHHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCcc---CC------CCCCCCccccCCC
Confidence 99999999999999999999999999999999999 99999999999999996531 11 0111111111122
Q ss_pred ceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCC-CchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCcee
Q psy14217 299 GIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMF 377 (529)
Q Consensus 299 ~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~-~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y 377 (529)
....+.... . +.-.++++.++++++....+ +++++.+++.++||+ ++||||+++|+++|++|
T Consensus 242 ~~~~~~~~~-~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~-----------~~SrLf~~~re~~glay 304 (438)
T COG0612 242 RVVRVNDPE-Q-----PDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGG-----------FSSRLFQELREKRGLAY 304 (438)
T ss_pred ceEEecCCC-C-----chhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCC-----------cchHHHHHHHHhcCcee
Confidence 233322110 0 01246788899998887665 788899999999875 23999999999999999
Q ss_pred EEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14217 378 SATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAGP----IDADELSRAKKQLQSMLLMNLEARPAVFEDVGR 453 (529)
Q Consensus 378 ~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~~----it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~ 453 (529)
+++++...+.+.|.+.+++.+.+.+.+.+.+.+.++++.+... +++++++++|..+.+.+....+++...++.+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~ 384 (438)
T COG0612 305 SVSSFSDFLSDSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQ 384 (438)
T ss_pred eeccccccccccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHH
Confidence 9999888888899999999998877777777777777766552 899999999999999999999999999999998
Q ss_pred HHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccCC-CeEEEEcCCCCCCC
Q psy14217 454 QVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTSQ-PSVAARGELINFPS 504 (529)
Q Consensus 454 ~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~-~~~~v~G~~~~ip~ 504 (529)
+....+.....+++.+.|++||++||+++|++++.++ .+++++|+.+..+.
T Consensus 385 ~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~~~~~ 436 (438)
T COG0612 385 YLLLGGSLITLEELLERIEAVTLEDVNAVAKKLLAPENLTIVVLGPEKALKD 436 (438)
T ss_pred HHHhcCCccCHHHHHHHHHhcCHHHHHHHHHHhcCCCCcEEEEEcccccccc
Confidence 8776677899999999999999999999999999974 88999999876554
No 4
>PRK15101 protease3; Provisional
Probab=100.00 E-value=3.5e-46 Score=424.21 Aligned_cols=410 Identities=13% Similarity=0.113 Sum_probs=328.7
Q ss_pred cCCCCCeEEEEcCCCCEEEEeec-CCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCE
Q psy14217 58 KDNDRNTQVTTLPNGLRVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136 (529)
Q Consensus 58 ~~~~~~~~~~~L~NGl~v~~~~~-~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~ 136 (529)
..+...++.++|+||++|++.+. ..+.+.+.+.+++|+++||++..|+|||+|||+|+||.+++..+++.+.++.+||+
T Consensus 38 ~~d~~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~ 117 (961)
T PRK15101 38 EKDPRQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGS 117 (961)
T ss_pred CCCccceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCC
Confidence 35678999999999999997554 56999999999999999999999999999999999999998777999999999999
Q ss_pred eeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCC
Q psy14217 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTL 216 (529)
Q Consensus 137 ~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~ 216 (529)
+|++|+.+.|.|++++++++++.+|+++++++.+|.|++++++++|+.+.+|+++..++| ...+.+.+.+.+|++||+
T Consensus 118 ~NA~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~--~~~~~~~~~~~~~~~hp~ 195 (961)
T PRK15101 118 HNASTASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRD--GMRMAQVSAETINPAHPG 195 (961)
T ss_pred ccceECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHhhCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999877765 578888889999999999
Q ss_pred CCCCCCCchhcCCC----CHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy14217 217 GLPKLCPPASIGVI----NNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 217 ~~~~~g~~~~l~~i----~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
+++..|+.++|.++ ++++|++||++||+|+||+++|+| ++++++.++++++|+.+|+..... | ....+.
T Consensus 196 ~~~~~G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~----~--~~~~~~ 269 (961)
T PRK15101 196 SRFSGGNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASV----P--EITVPV 269 (961)
T ss_pred ccCCCCCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCC----C--CCCCCC
Confidence 99999999999997 699999999999999999999999 999999999999999976432110 0 000000
Q ss_pred CCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCC-CchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh
Q psy14217 292 SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL 370 (529)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~-~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR 370 (529)
..+...+..+..... .++..+.+.|+.|...+. +..+..+++.+|+++.. ++|+..|+
T Consensus 270 ~~~~~~~~~~~~~~~----------~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~-----------g~l~~~L~ 328 (961)
T PRK15101 270 VTDAQKGIIIHYVPA----------QPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSP-----------GTLSDWLQ 328 (961)
T ss_pred CCHHHcCeEEEEEEC----------CCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCC-----------CcHHHHHH
Confidence 001112222222222 145778889988765322 33467899999997543 55777664
Q ss_pred hhcCceeEEEEecccc--CCcccEEEEEEeCCC---CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhc-CC
Q psy14217 371 NRHHWMFSATAYNHAY--ADTGLFCIHASAPPS---NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNL-EA 443 (529)
Q Consensus 371 ~~~gl~Y~~~a~~~~~--~~~g~f~i~~~~~p~---~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~-~~ 443 (529)
++||+|+++++...+ .+.|.|.|++.+.++ +++++++.+.++|+++++ |++++||+++|+.+..++.... ..
T Consensus 329 -~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~ 407 (961)
T PRK15101 329 -KQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITR 407 (961)
T ss_pred -HcCccceeeeccccccCCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCC
Confidence 779999999986643 567999999998885 799999999999999987 8999999999999998875432 22
Q ss_pred hHHHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccC-CCeEEEEcCC
Q psy14217 444 RPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS-QPSVAARGEL 499 (529)
Q Consensus 444 ~~~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~-~~~~~v~G~~ 499 (529)
+...+..++... ....+.........++.+++++|+++++. |.+ +..++++++.
T Consensus 408 ~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~ 462 (961)
T PRK15101 408 DMDYIEWLADTM-LRVPVEHTLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQ 462 (961)
T ss_pred hHHHHHHHHHHh-hhCCHHHheeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCC
Confidence 233344454442 22212223334578899999999999988 565 6777787764
No 5
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=1.5e-45 Score=390.81 Aligned_cols=332 Identities=18% Similarity=0.190 Sum_probs=280.0
Q ss_pred EEEcCCCCEEEEeecC-CCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccc
Q psy14217 66 VTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRD 144 (529)
Q Consensus 66 ~~~L~NGl~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~ 144 (529)
+++|+||++|++.+.+ .+.+++.++|++|+++|+.+..|++||+|||+|+||.+++..+++.+.++.+|+++|++|+.+
T Consensus 2 ~~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d 81 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLER 81 (696)
T ss_pred eEEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCC
Confidence 5799999999986554 599999999999999999999999999999999999998665689999999999999999999
Q ss_pred eEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCCCCCc
Q psy14217 145 TFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPP 224 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~~ 224 (529)
+|.|++++++++++.+|+++.|++.+|.|++++++++|+.+.+|++...++| ...+.+.+.+.+|++|||+++.+|+.
T Consensus 82 ~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp--~~~~~~~l~~~l~~~HPy~~~~iGt~ 159 (696)
T TIGR02110 82 TTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDA--DTLREAALLDALQAGHPLRRFHAGSR 159 (696)
T ss_pred eEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999888877 57889999999999999999999999
Q ss_pred hhcCCCC---HHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCce
Q psy14217 225 ASIGVIN---NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGI 300 (529)
Q Consensus 225 ~~l~~i~---~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (529)
++|+.++ .++|++||++||+|+||+|+|+| +++++++++++++|+.++++.... +.. +.+...+..
T Consensus 160 esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~--------~~~--~~p~~~~~~ 229 (696)
T TIGR02110 160 DSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECA--------QAP--PAPLLRFDR 229 (696)
T ss_pred HHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCC--------CCC--CCCCCCCce
Confidence 9999876 99999999999999999999999 999999999999999965431110 011 011112222
Q ss_pred eEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEE
Q psy14217 301 VKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSAT 380 (529)
Q Consensus 301 ~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~ 380 (529)
..+.... .++.++.+++++++..++ .++.+++.+|+++.+ |+|+.+||+ +|++|+++
T Consensus 230 ~~~~~~~---------~~q~~l~~~~p~~~~~d~--~al~lL~~iLg~g~s-----------SrL~~~LRe-~GLaysV~ 286 (696)
T TIGR02110 230 LTLAGGS---------EPRLWLLFALAGLPATAR--DNVTLLCEFLQDEAP-----------GGLLAQLRE-RGLAESVA 286 (696)
T ss_pred eEEEecC---------cceEEEEEeecCCCCCCh--HHHHHHHHHhCCCcc-----------hHHHHHHHH-CCCEEEEE
Confidence 2222111 145677777776655444 458999999997644 999999997 79999999
Q ss_pred EeccccCCcc--cEEEEEEe---CCCCHHHHHHHHHHHHHHhc-C--CCCHHHHHHHHHHH
Q psy14217 381 AYNHAYADTG--LFCIHASA---PPSNVKNIVDVLVKELVTMA-G--PIDADELSRAKKQL 433 (529)
Q Consensus 381 a~~~~~~~~g--~f~i~~~~---~p~~~~~~~~~i~~~l~~l~-~--~it~~el~~ak~~l 433 (529)
+++ .+.+.| .|.|++.+ .+++.+++++.|.++|++++ + +++.+|++++|+.-
T Consensus 287 s~~-~~~~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~ 346 (696)
T TIGR02110 287 ATW-LYQDAGQALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRR 346 (696)
T ss_pred Eec-cccCCCCcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhh
Confidence 965 555555 89999887 34589999999999999995 4 58999999999863
No 6
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-38 Score=330.65 Aligned_cols=411 Identities=15% Similarity=0.179 Sum_probs=329.1
Q ss_pred cCCCCCeEEEEcCCCCEEEE-eecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCE
Q psy14217 58 KDNDRNTQVTTLPNGLRVAS-ENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI 136 (529)
Q Consensus 58 ~~~~~~~~~~~L~NGl~v~~-~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~ 136 (529)
..++++++.++|+|||++.+ .|+..+++...+.|++|+..||.+.+|+||++|||+|.|+++||..+.+..+|+++||+
T Consensus 18 ~~d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs 97 (937)
T COG1025 18 ALDDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGS 97 (937)
T ss_pred cccCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCc
Confidence 36789999999999999996 66677999999999999999999999999999999999999999999999999999999
Q ss_pred eeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCC
Q psy14217 137 CDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTL 216 (529)
Q Consensus 137 ~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~ 216 (529)
.||+|..+.|+|.+++.++.++.+|+.+++++.+|.|+++.+++|+.+|..|..+...+ | ..++.+.....+-++||+
T Consensus 98 ~NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~-D-~~R~~~~~~~~~np~HP~ 175 (937)
T COG1025 98 HNASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTS-D-GWRMYQVQALTANPGHPL 175 (937)
T ss_pred cccccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCc-h-HHHHHHHHHhhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999987665 3 678888888999999999
Q ss_pred CCCCCCCchhcCC----CCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy14217 217 GLPKLCPPASIGV----INNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 217 ~~~~~g~~~~l~~----i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
.++..|+.++|.. ...++|++||++||++++|+++|+| -+.+++.+++.++|+.+|.+....+ ..+.+.
T Consensus 176 srFs~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p------~~p~p~ 249 (937)
T COG1025 176 SKFSTGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIP------PIPVPV 249 (937)
T ss_pred cccCCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCC------CCCCCC
Confidence 9999999999988 5689999999999999999999999 9999999999999999986532221 111111
Q ss_pred CCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCC-CchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHh
Q psy14217 292 SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVL 370 (529)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~-~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR 370 (529)
......+..+++.... +...+.+.|+.++.... ...+..++.+++|+.+. | | |-.. .
T Consensus 250 ~~d~~t~~ii~i~p~~----------~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~------g----s-L~~~-L 307 (937)
T COG1025 250 VTDEQTGKIIHIVPAK----------PRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESP------G----S-LLAW-L 307 (937)
T ss_pred CChHHhCceEEeccCC----------CCceEEEEEEcCCcccccccCCHHHHHHHhccCCC------c----h-HHHH-H
Confidence 1233345555555432 34678899998776554 35678899999997643 2 4 4334 3
Q ss_pred hhcCceeEEEEecccc-CCcccEEEEEEeCCC---CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCChH
Q psy14217 371 NRHHWMFSATAYNHAY-ADTGLFCIHASAPPS---NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARP 445 (529)
Q Consensus 371 ~~~gl~Y~~~a~~~~~-~~~g~f~i~~~~~p~---~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~ 445 (529)
.++||+-++.++.... .+.|.|.|....+.+ +.++++..+++.++.+++ ++....|++..+..-..+.....++.
T Consensus 308 k~~Glit~l~a~~~~~~~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~ 387 (937)
T COG1025 308 KKQGLITELSAGLDPISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRP 387 (937)
T ss_pred HhccchhhhccccccccCCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCCh
Confidence 4569999999987765 478889999875443 899999999999999987 78888888887777666655554443
Q ss_pred -HHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccCCCeEEEEcCC
Q psy14217 446 -AVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARGEL 499 (529)
Q Consensus 446 -~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~v~G~~ 499 (529)
...++++... ............-.+..-++++++.++.-+.-.+.++..+++.
T Consensus 388 ~~~~~~l~~~m-~~~p~~~~~~~~~~~~~yd~~~~~~~l~~~~pen~R~~lis~~ 441 (937)
T COG1025 388 MDYVSWLADNM-EREPVEHTLYASLVLPRYDPKAIQERLALMTPENARLWLISKL 441 (937)
T ss_pred HHHHHHHHHhc-ccCChhhhhchhhcccccCHHHHHHHHHhhCccceEEEEecCC
Confidence 2233333221 1111122222345567778899999999888336777777654
No 7
>KOG2583|consensus
Probab=100.00 E-value=2.1e-35 Score=279.91 Aligned_cols=403 Identities=26% Similarity=0.398 Sum_probs=319.3
Q ss_pred EEEEcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccc
Q psy14217 65 QVTTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRD 144 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~ 144 (529)
...+|.||++|...+..++..++.+.|++|||+|+..+.|++|+++...+..|.++ +...|.+..+..|+.++.+.++|
T Consensus 24 ~~~kl~ngL~Vas~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~-sal~ivr~se~~GG~Lss~~tRe 102 (429)
T KOG2583|consen 24 KTTKLVNGLTVASREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQER-SALKIVRESEQLGGTLSSTATRE 102 (429)
T ss_pred hhhccccceEEEeccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCcccc-chhhhhhhhHhhCceeeeeeecc
Confidence 56799999999999999999999999999999999999999999999999999997 56799999999999999999999
Q ss_pred eEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy14217 145 TFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMAR-QTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k-~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~ 223 (529)
.+.|.+++++++++-.|.+|.+.+.+|.|.+|+++... .++..++... .| ...+++.+|+++|.+ .+|++++.+
T Consensus 103 ~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~~~--t~--~~~a~e~lH~aAfRn-gLgnslY~p 177 (429)
T KOG2583|consen 103 LIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLAYQ--TP--YTIAIEQLHAAAFRN-GLGNSLYSP 177 (429)
T ss_pred eEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhhhc--Ch--HHHHHHHHHHHHHhc-ccCCcccCC
Confidence 99999999999999999999999999999999999988 6666555433 44 789999999999987 899999988
Q ss_pred chhcCCCCHHHHHHHHHhhcCCCCeEEEEecCCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCceeEE
Q psy14217 224 PASIGVINNNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKE 303 (529)
Q Consensus 224 ~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (529)
--.+.+++.++|.+|-+++|...|++++.+|+|++.++...++++. ++.+. .....+..+.|++.+.
T Consensus 178 ~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~nvd~~~L~~~~~~~~~-~~~~~------------~~k~a~a~~~gGe~Rk 244 (429)
T KOG2583|consen 178 GYQVGSVSSSELKDFAAKHFVKGNAVLVGVNVDHDDLKQFADEYAP-IRDGL------------PLKPAPAKYSGGEARK 244 (429)
T ss_pred cccccCccHHHHHHHHHHHhhccceEEEecCCChHHHHHHHHHhcc-ccCCC------------CCCCCCccccCCcccc
Confidence 8889999999999999999999999999999999999999999832 22211 1111235566776654
Q ss_pred ecCCCCCCCCCCCCcceeEEEEeccCC-CCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEe
Q psy14217 304 ECNIPTFAGTSGLPELSHVVIGLEGVS-HQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAY 382 (529)
Q Consensus 304 ~~~~~~~~g~~~~~~~~~v~i~~~~~~-~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~ 382 (529)
.... +..++.+.-.+.. .+.+...+..++.+.|++...-..| .+-|-+-.-..-+-.-++.++
T Consensus 245 ~~~g----------~~~~v~vagegAAa~~~k~~~a~av~~~~Lg~~~~~k~~------t~~~~~aa~~a~~~~~s~sA~ 308 (429)
T KOG2583|consen 245 DARG----------NRVHVAVAGEGAAAGNLKVLAAQAVLLAALGNSAPVKRG------TGLLSEAAGAAGEQGASASAF 308 (429)
T ss_pred ccCC----------ceeEEEEecCcccccchHHHHHHHHHHHHHhcccccccc------cchHHHHHhhccccCceeeee
Confidence 4332 3466666655543 3456788889999999976532222 132332222222234567889
Q ss_pred ccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCC
Q psy14217 383 NHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR 461 (529)
Q Consensus 383 ~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 461 (529)
..+|.|.|+|++++..+..++.+++......++.... +++-.....+++.++....+..+. ....... . .+..
T Consensus 309 ~a~ysDsGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a---~~~~~~~--~-a~~~ 382 (429)
T KOG2583|consen 309 NAPYSDSGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEA---LELATGS--Q-ANLV 382 (429)
T ss_pred cccccCCceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHH---HHHhhHH--H-hcCC
Confidence 9999999999999998888899999888888877754 566555555555555554433322 1111111 1 1222
Q ss_pred CChhHHHHHHccCCHHHHHHHHHHhccCCCeEEEEcCCCCCCCHHHH
Q psy14217 462 KRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARGELINFPSYEDI 508 (529)
Q Consensus 462 ~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~v~G~~~~ip~~~~~ 508 (529)
..+.+++..|++||..||++++++++..+..++.+|+...+|.+|++
T Consensus 383 ~~~d~~i~~id~Vt~sdV~~a~kk~~s~kls~aA~Gnl~~vPY~DEL 429 (429)
T KOG2583|consen 383 SEPDAFIQQIDKVTASDVQKAAKKFLSGKLSLAAYGNLSNVPYLDEL 429 (429)
T ss_pred CChHHHHHHhccccHHHHHHHHHHhccCcceeeeeccccCCcccccC
Confidence 37888999999999999999999999999999999999999999874
No 8
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=1.3e-35 Score=334.53 Aligned_cols=402 Identities=12% Similarity=0.120 Sum_probs=293.6
Q ss_pred eEEEEcCCCCEEEEeecCC---CeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhC--CEee
Q psy14217 64 TQVTTLPNGLRVASENRFG---SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIG--GICD 138 (529)
Q Consensus 64 ~~~~~L~NGl~v~~~~~~~---~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g--~~~~ 138 (529)
+...-.+||++|++.+.+. +.+.+.++|++|+ .+..|++|++|||+|+||.+|+.. ++...++..| +.+|
T Consensus 92 ~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~-~~~~~l~~~gl~~~lN 166 (1119)
T PTZ00432 92 TVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYK-DSFSLLVQGGFNSFLN 166 (1119)
T ss_pred EEEEEcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcc-cHHHHHHhcCcCCCcc
Confidence 3444556999999765443 4789999999996 456899999999999999999764 6777887765 7799
Q ss_pred EeeccceEEEEEEecCC-CHHHHHHHHHHhhcCCCCCHHHH--H---------HH--------------------HHHHH
Q psy14217 139 CLSSRDTFIYAASAATS-GLDTVMKILGDVVLRPKFSKEEI--N---------MA--------------------RQTIQ 186 (529)
Q Consensus 139 ~~t~~~~~~~~~~~~~~-~l~~~l~ll~~~l~~p~f~~~~~--~---------~~--------------------k~~~~ 186 (529)
|+|+.|+|.|.+++.++ ++..+++++.|.+.+|.|+++++ . ++ +..|.
T Consensus 167 A~T~~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~ 246 (1119)
T PTZ00432 167 AYTFKDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVY 246 (1119)
T ss_pred ccCCCCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHH
Confidence 99999999999999875 79999999999999999998763 2 21 77899
Q ss_pred HHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHH
Q psy14217 187 FELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAAN 265 (529)
Q Consensus 187 ~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~ 265 (529)
+|++...++| ...+.+.+.+.+| +|||+++..|++++|.+++.++|++||++||+|+||+++++| ++++++.++++
T Consensus 247 ~Emk~~~~~p--~~~~~~~~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~ 323 (1119)
T PTZ00432 247 SEMKKRFSDP--LSFGYSVIYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVD 323 (1119)
T ss_pred HHHHHhhCCH--HHHHHHHHHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHH
Confidence 9999888877 6899999999999 999999999999999999999999999999999999999999 99999999999
Q ss_pred hhhccCCCccccccccccC-CCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEE-eccC-C----------CC
Q psy14217 266 KYFVDKQPVWIQDKSLVLT-DKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIG-LEGV-S----------HQ 332 (529)
Q Consensus 266 ~~f~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~-~~~~-~----------~~ 332 (529)
++|+.+|+.........++ ........ ..+.+. ..+....+... .++..+.++ |..+ . ..
T Consensus 324 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~-----~e~~~l~~~~w~~~p~~~~~~~~~~~~~ 396 (1119)
T PTZ00432 324 NYLTKHPKTGQLSHTAYREDADENLLYE-EYKDKP-KHVKKKFSSHS-----EEEENLMSVSWLLNPKHNGSKDYDKSLI 396 (1119)
T ss_pred HHHhhccccccccccccccccccccccc-ccccCC-eEEEeccCCCc-----cccccEEEEEEEcCCccccccccccccC
Confidence 9998876431100000000 00000000 011111 11111111000 134556564 9763 2 12
Q ss_pred C-CCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEE-EEeccccCCcccEEEEEE-eC-------CCC
Q psy14217 333 D-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSA-TAYNHAYADTGLFCIHAS-AP-------PSN 402 (529)
Q Consensus 333 ~-~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~-~a~~~~~~~~g~f~i~~~-~~-------p~~ 402 (529)
+ .+..++.||+.+|+++++ |+|++.||+ .||+|++ .+++....+.+.|.|++. +. +++
T Consensus 397 d~~~~~AL~VLs~lLggg~s-----------S~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~ 464 (1119)
T PTZ00432 397 DPVDYLALLVLNYLLLGTPE-----------SVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKV 464 (1119)
T ss_pred CHHHHHHHHHHHHHHcCCCc-----------cHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhh
Confidence 2 578999999999998655 999999997 6999996 445666677889999886 33 234
Q ss_pred HHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCC----hHHHHHHHHHHHHhcCCCCC---hhHHHHHHcc-
Q psy14217 403 VKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEA----RPAVFEDVGRQVLATGHRKR---PSTYIESIEN- 473 (529)
Q Consensus 403 ~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~---~~~~~~~i~~- 473 (529)
++++.+.|.++|+++++ |+++++++++++++.-.+...... .-..+..+...++.++.+.. .+..++.|+.
T Consensus 465 ~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~ 544 (1119)
T PTZ00432 465 HYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLR 544 (1119)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHH
Confidence 78999999999999976 899999999999998887754321 12334445444443333222 1222333331
Q ss_pred --CCHHHHHHHHHHhccCCCe
Q psy14217 474 --VTEDDIRRVASRLLTSQPS 492 (529)
Q Consensus 474 --vT~edv~~~a~~~l~~~~~ 492 (529)
-+..-+++++++||-.+++
T Consensus 545 ~~~~~~y~e~Li~k~ll~N~h 565 (1119)
T PTZ00432 545 IDNESKYLEKLIEKHLLNNNH 565 (1119)
T ss_pred HhcccHHHHHHHHHHccCCCe
Confidence 2335699999999976544
No 9
>KOG0959|consensus
Probab=100.00 E-value=3.6e-34 Score=306.26 Aligned_cols=406 Identities=14% Similarity=0.148 Sum_probs=316.3
Q ss_pred CCCCCeEEEEcCCCCEEEE-eecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEe
Q psy14217 59 DNDRNTQVTTLPNGLRVAS-ENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGIC 137 (529)
Q Consensus 59 ~~~~~~~~~~L~NGl~v~~-~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~ 137 (529)
.+.+.++..+|+||+++.+ .|+..++++..+-|++||..||.+.+||||++|||+|.||.+||..+++..++.++||+.
T Consensus 23 ~d~r~yr~~~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGss 102 (974)
T KOG0959|consen 23 GDTREYRGIELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSS 102 (974)
T ss_pred CCccceeEEEecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCcc
Confidence 5678999999999999996 555568899999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCC
Q psy14217 138 DCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLG 217 (529)
Q Consensus 138 ~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~ 217 (529)
||+|..++|+|.+.+..+.++.+|+++++++.+|.|+++..++|+.+|..|.+++.++- ..+..++.....-++||++
T Consensus 103 NA~T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D--~wr~~ql~~~l~~~~hp~~ 180 (974)
T KOG0959|consen 103 NAYTDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSD--GWRFDQLLRSLSNPGHPYS 180 (974)
T ss_pred ccccccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHhcCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999877653 5677777777777899999
Q ss_pred CCCCCCchhcCCCC-----HHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCC
Q psy14217 218 LPKLCPPASIGVIN-----NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDT 291 (529)
Q Consensus 218 ~~~~g~~~~l~~i~-----~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~ 291 (529)
+...|+.++|.... ++.|++||++||++++|+++|+| .+.+.+..++.+.|+.+++..... |....
T Consensus 181 kF~tGN~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~--------p~f~~ 252 (974)
T KOG0959|consen 181 KFSTGNKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPR--------PVFPE 252 (974)
T ss_pred hccccchhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCC--------CcccC
Confidence 99999999999998 99999999999999999999999 999999999999999987653221 11111
Q ss_pred C--CCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCC-CchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHH
Q psy14217 292 S--SATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTN 368 (529)
Q Consensus 292 ~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~-~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~ 368 (529)
. .+...+..+.++.- .+-..+.+.|+.|+.... +..+...+..++|..+. | | |...
T Consensus 253 ~p~~~e~~~~~~~v~pi----------k~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~------G----S-L~~~ 311 (974)
T KOG0959|consen 253 PPFLPEELKKLVRVVPI----------KDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGP------G----S-LLSY 311 (974)
T ss_pred CCCChHHhCcEEEEEec----------cccceEEEEEecCCcccccccCcHHHHHHHhccCCc------c----h-HHHH
Confidence 1 12223444444322 234678888998875443 66778999999996532 2 3 6666
Q ss_pred HhhhcCceeEEEEecc-ccCCcccEEEEEEeCCC---CHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCC
Q psy14217 369 VLNRHHWMFSATAYNH-AYADTGLFCIHASAPPS---NVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEA 443 (529)
Q Consensus 369 lR~~~gl~Y~~~a~~~-~~~~~g~f~i~~~~~p~---~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~ 443 (529)
|+.. ||+-++.++.. ...+.+.|.|.+....+ ++++++..+++.+..++. +.-..-+++....-...+.+..+.
T Consensus 312 Lk~~-gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~ 390 (974)
T KOG0959|consen 312 LKRL-GWATSLEAGIPEFASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKE 390 (974)
T ss_pred HHHh-hchheeecCCCccccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccC
Confidence 7664 99999999877 44567888888775433 789999999999998876 555555665554444444444333
Q ss_pred -hHHHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccCCCeEEEEc
Q psy14217 444 -RPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTSQPSVAARG 497 (529)
Q Consensus 444 -~~~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~v~G 497 (529)
+...+..++... ..-.....-.....+....++-|+.+...+-..+..+.+++
T Consensus 391 ~p~~~~~~~~~nl-q~~P~~~il~~~~ll~~~~p~~i~~~~~~L~p~n~~v~~~s 444 (974)
T KOG0959|consen 391 PPMEYASEIASNL-QYYPVEDVLTGSYLLTEFDPDLIQEVLSSLVPSNMRVILVS 444 (974)
T ss_pred CcHHHHHHHHhhc-ccCChHHhhcchhhhhhcChHHHHHHHHhcCcccceeeeee
Confidence 333333443332 11111222233467788889999988876655577776665
No 10
>PRK15101 protease3; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.57 Aligned_cols=421 Identities=10% Similarity=0.033 Sum_probs=318.8
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEeecC----CCeEEEEEEEccCCCCCCCCCCcHHHHHH
Q psy14217 35 PSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF----GSFCTIGVIIDSGSRYEQPYPSGVSHFLE 110 (529)
Q Consensus 35 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~----~~~~~i~l~~~~G~~~e~~~~~Gla~ll~ 110 (529)
..+.+|+.|++||.+....... .....++.+.++||++||+.+.. .|++.+.+.+.+|...+++...|++.++.
T Consensus 496 ~~l~lP~~n~fip~~~~~~~~~--~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~ 573 (961)
T PRK15101 496 IALSLPELNPYIPDDFSLIKAD--KAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALND 573 (961)
T ss_pred ccCCCCCCCCccCCCCeeccCC--CCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHH
Confidence 4577899999999876543321 12235689999999999986553 59999999999999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q psy14217 111 KLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELE 190 (529)
Q Consensus 111 ~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~ 190 (529)
.|+.. +..++....+..|.+++.. +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+.++++
T Consensus 574 ~ll~~------~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~ 646 (961)
T PRK15101 574 YLAGL------ALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLD 646 (961)
T ss_pred HHHHH------HHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHh
Confidence 88732 3345666666779999998 7999999999999999999999999999999999999999999999998
Q ss_pred HhhcCCchHHHHHHHHHH-HcCCCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhh
Q psy14217 191 NYQMRPEQETLLMDMIHA-AAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYF 268 (529)
Q Consensus 191 ~~~~~p~~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f 268 (529)
+..... .+.+.+.. ..|.+||++.. .++.++|++++.++|++||+++|.+.+++++|+| ++.+++.+++++++
T Consensus 647 ~~~~~~----~~~~~~~~~~~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~ 721 (961)
T PRK15101 647 SAEKGK----AYEQAIMPAQMLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQ 721 (961)
T ss_pred hhcccC----cHHHHHHHHHHHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHH
Confidence 765421 22222222 34678999864 5679999999999999999999999999999999 99999999999998
Q ss_pred ccCCCccccccccccCCCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcC
Q psy14217 269 VDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGG 348 (529)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~ 348 (529)
+.++....... ....+. .+ .+....+..... ..+..+.+.+..+.. +..+..+++.+|++
T Consensus 722 ~~l~~~~~~~~-----~~~~~~--~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~g~---~~~~~~v~~~lLg~ 781 (961)
T PRK15101 722 KQLGADGTEWW-----RGKDVV--VD--KKQSVNFEKAGS--------STDSALAAVYVPTGY---DEYQSSAYSSLLGQ 781 (961)
T ss_pred HHhccCCcccc-----cccceE--eC--CCCeEEEecCCC--------CCCCeEEEEEEeCCC---CCHHHHHHHHHHHH
Confidence 88653210000 000000 00 111122221110 123445555533332 23778888889986
Q ss_pred CCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEEeC---CCCHHHHHHHHHHHHHHhcCCCCHHH
Q psy14217 349 GGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAP---PSNVKNIVDVLVKELVTMAGPIDADE 425 (529)
Q Consensus 349 ~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~---p~~~~~~~~~i~~~l~~l~~~it~~e 425 (529)
+ |.+|||++||+++||+|+|+++.....+.+.+.+.+++. |+.+.+.++.+.+++.+..+++|++|
T Consensus 782 ~-----------~ssrlf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~~lt~eE 850 (961)
T PRK15101 782 I-----------IQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLRAMKPEE 850 (961)
T ss_pred H-----------HhHHHHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 339999999999999999999988876666666777644 44567777777666433235799999
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcC-CCCChhHHHHHHccCCHHHHHHHHHHh-ccC-CCeE--EEEcCCC
Q psy14217 426 LSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATG-HRKRPSTYIESIENVTEDDIRRVASRL-LTS-QPSV--AARGELI 500 (529)
Q Consensus 426 l~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~i~~vT~edv~~~a~~~-l~~-~~~~--~v~G~~~ 500 (529)
|+++|+.+++++....++....+..+|..+...+ .++..+++.+.|++||++||+++++++ +.+ +..+ .+.|...
T Consensus 851 ~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (961)
T PRK15101 851 FAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQISGSQN 930 (961)
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEEeeccCc
Confidence 9999999999999999999999999999876433 468889999999999999999999998 654 3333 4445543
No 11
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.96 E-value=1.1e-26 Score=245.78 Aligned_cols=394 Identities=14% Similarity=0.179 Sum_probs=297.7
Q ss_pred EcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHh-CCEeeEeeccceE
Q psy14217 68 TLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKI-GGICDCLSSRDTF 146 (529)
Q Consensus 68 ~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~-g~~~~~~t~~~~~ 146 (529)
--++|+++++.+++.+...+.+.|++- |.+..|++|.|||+.+.|+.+||-.+-+...+.+. +--+||.|+.|.|
T Consensus 26 H~~TGa~l~hi~~~d~~~vFsi~F~T~----p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T 101 (978)
T COG1026 26 HEKTGAELAHIKNEDPNNVFSIAFKTE----PHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKT 101 (978)
T ss_pred eccCCceEEEecCCCcCceEEEEeecC----CCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcc
Confidence 345899999887777788888888874 66788999999999999999999988888887765 4449999999999
Q ss_pred EEEEEec-CCCHHHHHHHHHHhhcCCCCCHHHHHHH--------------HHHHHHHHHHhhcCCchHHHHHHHHHHHcC
Q psy14217 147 IYAASAA-TSGLDTVMKILGDVVLRPKFSKEEINMA--------------RQTIQFELENYQMRPEQETLLMDMIHAAAY 211 (529)
Q Consensus 147 ~~~~~~~-~~~l~~~l~ll~~~l~~p~f~~~~~~~~--------------k~~~~~el~~~~~~p~~~~~~~~~l~~~~~ 211 (529)
.|-++.. .+++-.++.+..|.+++|.+.++.|.++ +..|..||+....++ ..++++.+.+++|
T Consensus 102 ~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~--~~~~~~~~~~slf 179 (978)
T COG1026 102 VYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSG--ESVLSRAMQQSLF 179 (978)
T ss_pred eeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCc--hhHHHHHHHHhhC
Confidence 9998876 6789999999999999999999999887 556778888887776 7899999999999
Q ss_pred CCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhh-hccCCCccccccccccCCCCCC
Q psy14217 212 KDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKY-FVDKQPVWIQDKSLVLTDKPVI 289 (529)
Q Consensus 212 ~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~-f~~l~~~~~~~~~~~~~~~~~~ 289 (529)
++..|+....|.+..|..++.+++++||+++|+|+|+.++++| ++.+++++.+++. +...++... . .+. +...
T Consensus 180 p~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~--~--~~i-~~~~ 254 (978)
T COG1026 180 PGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKREL--D--VPI-PDQK 254 (978)
T ss_pred CCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhcccccccc--C--CCC-Cccc
Confidence 9999999999999999999999999999999999999999999 9999999999987 555443211 1 000 0010
Q ss_pred CCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCC-CCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHH
Q psy14217 290 DTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTN 368 (529)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~-~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~ 368 (529)
. .............+.+..+ ..+..+.++|.+++.++ .+..++.||..+|-++.+ +.|.+.
T Consensus 255 ~--~~~~~~~~~~ypi~~~~~d-----e~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~a-----------sPl~~~ 316 (978)
T COG1026 255 A--FKKPRRKVLEYPISFDEED-----EDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAA-----------SPLTQA 316 (978)
T ss_pred c--cCcccccceeeccCCCCCC-----CceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcc-----------cHHHHH
Confidence 0 1111111111111101111 25788899999988766 478999999999998765 899999
Q ss_pred HhhhcCce-eEEEEeccccCCcccEEEEEE-eCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCChH
Q psy14217 369 VLNRHHWM-FSATAYNHAYADTGLFCIHAS-APPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARP 445 (529)
Q Consensus 369 lR~~~gl~-Y~~~a~~~~~~~~g~f~i~~~-~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~ 445 (529)
|.|. |++ +.+...+........|.+.++ +..+++++..+.++.+|+.+.. |++.+.++.++.++.-++......+-
T Consensus 317 lies-glg~~~~~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~~s~pf 395 (978)
T COG1026 317 LIES-GLGFADVSGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEVKSYPF 395 (978)
T ss_pred HHHc-CCCcccccceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhhcCCCc
Confidence 9886 666 434333555555677777776 5667899999999999999875 89999999999999988877644443
Q ss_pred H--HHHHHHHHHHhcCCCC---ChhHHHHHHccCCHHH--HHHHHHHhccCCC
Q psy14217 446 A--VFEDVGRQVLATGHRK---RPSTYIESIENVTEDD--IRRVASRLLTSQP 491 (529)
Q Consensus 446 ~--~~~~l~~~~l~~~~~~---~~~~~~~~i~~vT~ed--v~~~a~~~l~~~~ 491 (529)
. .+.+....++.++.+. ...++.+.|+.--..+ +++++++|+-.++
T Consensus 396 gl~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~ 448 (978)
T COG1026 396 GLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNP 448 (978)
T ss_pred cHHHHHHhccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCC
Confidence 2 2222222233344432 1244556665554555 9999999997654
No 12
>KOG2019|consensus
Probab=99.93 E-value=9.3e-24 Score=212.04 Aligned_cols=402 Identities=13% Similarity=0.184 Sum_probs=300.7
Q ss_pred CCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhC-CEeeEeeccceEEE
Q psy14217 70 PNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIG-GICDCLSSRDTFIY 148 (529)
Q Consensus 70 ~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g-~~~~~~t~~~~~~~ 148 (529)
.-|.++...+++.+.-.+++.++.. |.+..|+.|++||....|+.+||-++-+.+.|.+.= .-+||.|..|+|.|
T Consensus 60 ~Tgae~lhl~reD~N~vFsI~FrTp----p~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~y 135 (998)
T KOG2019|consen 60 KTGAEVLHLDREDENNVFSIVFRTP----PKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFY 135 (998)
T ss_pred CCCceeEeeccCCCCceeEEEeecC----CCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCccee
Confidence 4799999888776666777777775 556779999999999999999999999988887663 44999999999999
Q ss_pred EEEec-CCCHHHHHHHHHHhhcCCCCCHHHHHHH------------------HHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy14217 149 AASAA-TSGLDTVMKILGDVVLRPKFSKEEINMA------------------RQTIQFELENYQMRPEQETLLMDMIHAA 209 (529)
Q Consensus 149 ~~~~~-~~~l~~~l~ll~~~l~~p~f~~~~~~~~------------------k~~~~~el~~~~~~p~~~~~~~~~l~~~ 209 (529)
-++.. ++++..+.++..|....|.+.+.+|.++ |..|..|++....+| ...+...+.+.
T Consensus 136 PfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~--~~if~~~~Qq~ 213 (998)
T KOG2019|consen 136 PFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDP--DYIFGMLFQQA 213 (998)
T ss_pred ecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccCh--hHHHHHHHHHh
Confidence 98765 6899999999999999999998888887 778888999877777 57899999999
Q ss_pred cCCCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCC
Q psy14217 210 AYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPV 288 (529)
Q Consensus 210 ~~~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~ 288 (529)
+|+++.||....|++-.|.+++.++|++||++||+|+|..+.-+| ++.++.+.+++..|....++... ..
T Consensus 214 L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s---------~k 284 (998)
T KOG2019|consen 214 LFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELS---------SK 284 (998)
T ss_pred hCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhccccccccc---------Cc
Confidence 999999999999999999999999999999999999999999999 99999999999887765433111 11
Q ss_pred CCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCC-CCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHH
Q psy14217 289 IDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQD-PDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYT 367 (529)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~-~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~ 367 (529)
+.....-..+..+........ |..| ..|+.+.+.|..+...+ -+..++.+|..+|-++++ |.+|+
T Consensus 285 v~~qk~f~kp~rvve~~p~d~--~~~p-~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gps-----------Sp~yk 350 (998)
T KOG2019|consen 285 VTFQKLFDKPRRVVEKGPADP--GDLP-KKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPS-----------SPFYK 350 (998)
T ss_pred cccccccccCceeeeecCCCC--CCCc-cceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCc-----------cHHHH
Confidence 111111112222222222111 1111 14677788887766544 378899999999998765 99999
Q ss_pred HHhhh-cCceeEEEEeccccCCcccEEEEEEe-CCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCCh
Q psy14217 368 NVLNR-HHWMFSATAYNHAYADTGLFCIHASA-PPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEAR 444 (529)
Q Consensus 368 ~lR~~-~gl~Y~~~a~~~~~~~~g~f~i~~~~-~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~ 444 (529)
.|.|. .|.-+++.+++..+-..+.|+|..+. ..++++.+.+.+..+++++.+ +++.+.++...+++.-++..+-...
T Consensus 351 ~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~f 430 (998)
T KOG2019|consen 351 ALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTGF 430 (998)
T ss_pred HHHHcCCCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccch
Confidence 99986 34457888888888788999999885 445799999999999999987 8999999999988887776655443
Q ss_pred HH-HHHHHHHHHHhcCCCCCh---hHHH----HHHccCCHHHHHHHHHHhccCCC---eEEEEcCCC
Q psy14217 445 PA-VFEDVGRQVLATGHRKRP---STYI----ESIENVTEDDIRRVASRLLTSQP---SVAARGELI 500 (529)
Q Consensus 445 ~~-~~~~l~~~~l~~~~~~~~---~~~~----~~i~~vT~edv~~~a~~~l~~~~---~~~v~G~~~ 500 (529)
.- ++..+..-+....++-.+ ++.+ ..+..-...=.+..+++|+..++ ++.+.++.+
T Consensus 431 GL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e 497 (998)
T KOG2019|consen 431 GLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPE 497 (998)
T ss_pred hHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCch
Confidence 21 222232222223332211 2222 33333355668999999997643 445556543
No 13
>KOG0961|consensus
Probab=99.89 E-value=6.5e-21 Score=191.50 Aligned_cols=403 Identities=15% Similarity=0.158 Sum_probs=272.5
Q ss_pred CCeEEEEcC---CCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEee
Q psy14217 62 RNTQVTTLP---NGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICD 138 (529)
Q Consensus 62 ~~~~~~~L~---NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~ 138 (529)
+++...+-. -|++|++...+++.++=.+.|.. |...+.|+.|-+|||.|+|+.+||-..-+...-...=+..|
T Consensus 16 ~~y~~~kyis~~Tkl~va~~~~pts~vhG~f~v~T----Ea~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtN 91 (1022)
T KOG0961|consen 16 GGYKLFKYISKNTKLRVAIGEVPTSMVHGAFSVVT----EADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTN 91 (1022)
T ss_pred CceEEEEEeccccceEEEEeecCCcceeeeEEeee----eecCCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccc
Confidence 344444433 37888876666655555555544 33456899999999999999999875433333333346699
Q ss_pred EeeccceEEEEEEec-CCCHHHHHHHHHHhhcCCCCCHHHHHHH----------HHHHHHHHHHhhcCCchHHHHHHHHH
Q psy14217 139 CLSSRDTFIYAASAA-TSGLDTVMKILGDVVLRPKFSKEEINMA----------RQTIQFELENYQMRPEQETLLMDMIH 207 (529)
Q Consensus 139 ~~t~~~~~~~~~~~~-~~~l~~~l~ll~~~l~~p~f~~~~~~~~----------k~~~~~el~~~~~~p~~~~~~~~~l~ 207 (529)
|+|+.|+|.|.++.. .+.+-++|..+.|-+..|.+++++|..+ +..|..|++..+..- ...+.+...
T Consensus 92 AwTDtD~T~YtLStag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~--~~im~~~~~ 169 (1022)
T KOG0961|consen 92 AWTDTDHTAYTLSTAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEM--ESIMDRKTK 169 (1022)
T ss_pred cccccCcceEEeecccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhccc--chhhhhhhh
Confidence 999999999999987 6789999999999999999999999876 567788888776653 578888999
Q ss_pred HHcCC-CCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccC-------CCccccc
Q psy14217 208 AAAYK-DNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDK-------QPVWIQD 278 (529)
Q Consensus 208 ~~~~~-~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l-------~~~~~~~ 278 (529)
+..|| .++|.....|.+..|+.++.+.+++||+++|+++||.+.|+| +++++++...+..-..+ |+.|+++
T Consensus 170 ~~~yP~~sgY~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rP 249 (1022)
T KOG0961|consen 170 EVIYPPFSGYAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRP 249 (1022)
T ss_pred eeecCCCCCceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCC
Confidence 99998 778888889999999999999999999999999999999999 99999988877655433 3333321
Q ss_pred cccccCCCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCC-CchHHHHHHHhhcCCCCCCCCCC
Q psy14217 279 KSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDP-DFVPACVLNILMGGGGSFSAGGP 357 (529)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~-~~~~~~vl~~lL~~~~~f~~~~~ 357 (529)
-. ...++...+ ......++-+.. + ..+..|.++|.+++.++- ...++.+|..+|.+..-
T Consensus 250 f~-----~tn~~~~i~--e~t~~tVefp~~--D-----es~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~sav------ 309 (1022)
T KOG0961|consen 250 FS-----FTNALSDIK--ESTVHTVEFPTD--D-----ESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAV------ 309 (1022)
T ss_pred cc-----cccCcccCC--ccceeeeecCCc--c-----cccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccc------
Confidence 10 001111111 111112221111 1 246789999999887664 56789999999987533
Q ss_pred CCCcccHHHHHHhhhc-CceeEEEEeccccCCcccEEEEEE-eCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy14217 358 GKGMYTRLYTNVLNRH-HWMFSATAYNHAYADTGLFCIHAS-APPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQS 435 (529)
Q Consensus 358 g~g~~srL~~~lR~~~-gl~Y~~~a~~~~~~~~g~f~i~~~-~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~ 435 (529)
+.+-+.+.+-. .++-+++.... +.=.-.+.+.++ ++-+++++.-..+++.+..-+ .|+-+.+.....+-+-
T Consensus 310 -----apf~~~fVeieDP~assv~f~~~-~~vrc~i~L~f~gVP~EKi~~~~~k~l~~l~et~-~iDm~Rm~~~i~~t~~ 382 (1022)
T KOG0961|consen 310 -----APFQKDFVEIEDPLASSVSFHIA-EGVRCDIRLNFAGVPVEKIDECAPKFLDKLVETA-NIDMERMGYLIDQTIL 382 (1022)
T ss_pred -----cccccceEEecCccccceeeeee-cccceeEEEeecCCcHHHhhhhhHHHHHHHHHhc-ccCHHHHHHHHHHHHH
Confidence 55555554422 34444443322 111122333443 455677777766666654322 4777776666666666
Q ss_pred HHHHhcCChHH--HHHHHHHHHHhcCCCCC-------hhHHHHHHccCCHHHHHHHHHHhccCCCeEEEEc
Q psy14217 436 MLLMNLEARPA--VFEDVGRQVLATGHRKR-------PSTYIESIENVTEDDIRRVASRLLTSQPSVAARG 497 (529)
Q Consensus 436 ~~~~~~~~~~~--~~~~l~~~~l~~~~~~~-------~~~~~~~i~~vT~edv~~~a~~~l~~~~~~~v~G 497 (529)
++..+++.... .+..+....+.+...+. .-++.+.+.+...+|.+++.++|+..++.+.|++
T Consensus 383 ~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia 453 (1022)
T KOG0961|consen 383 NYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVENPSATVIA 453 (1022)
T ss_pred HHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhccCCCeEEEe
Confidence 66667766543 22333333332322211 1346789999999999999999999877776764
No 14
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.89 E-value=2.2e-22 Score=177.61 Aligned_cols=147 Identities=30% Similarity=0.594 Sum_probs=136.8
Q ss_pred EEEEeec-CCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceEEEEEEe
Q psy14217 74 RVASENR-FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASA 152 (529)
Q Consensus 74 ~v~~~~~-~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~ 152 (529)
+|++.++ ..+.+.+.+++++|+++|++...|++|+++||++.|+.++++ .++.+.++.+|+.++++++++.+.|.+++
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~-~~l~~~l~~~G~~~~~~t~~d~t~~~~~~ 79 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSS-DELQEELESLGASFNASTSRDSTSYSASV 79 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBH-HHHHHHHHHTTCEEEEEEESSEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhh-hhhHHHhhhhccccceEecccceEEEEEE
Confidence 5777555 679999999999999999999999999999999999999854 89999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy14217 153 ATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 153 ~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~ 223 (529)
++++++.+|+++++++.+|.|++++|+++|..+..+++....+| ...+.+.+++.+|.++||++++.|+
T Consensus 80 ~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~--~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 80 LSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENP--QELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp EGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHH--HHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred ecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHhccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999987766 6899999999999999999998875
No 15
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.88 E-value=1.3e-21 Score=178.55 Aligned_cols=181 Identities=25% Similarity=0.415 Sum_probs=142.6
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCccccccccccCCCCCCCCCCCcccCceeEEecCC
Q psy14217 229 VINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNI 307 (529)
Q Consensus 229 ~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (529)
+++.++|++||++||+|+||+++++| ++++++.++++++|+.++....... ..............+..+......
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 76 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPK----PKPRSPPLPPSEPQGKEIVIPSKD 76 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGS----SSCSSSSSSCGGSSEEEEEEEESS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccc----cccccccccccccccccccccccc
Confidence 57899999999999999999999999 9999999999999999875421000 001111111112222222222211
Q ss_pred CCCCCCCCCCcceeEEEEeccCCC-CCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEecccc
Q psy14217 308 PTFAGTSGLPELSHVVIGLEGVSH-QDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAY 386 (529)
Q Consensus 308 ~~~~g~~~~~~~~~v~i~~~~~~~-~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~ 386 (529)
..+..+.++|++++. +.++..++.+++.+|+++. .++|+..||++.+++|++++++..+
T Consensus 77 ---------~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~s~l~~~lr~~~~l~y~v~~~~~~~ 136 (184)
T PF05193_consen 77 ---------ESQSIVSIAFPGPPIKDSKDYFALNLLSSLLGNGM-----------SSRLFQELREKQGLAYSVSASNSSY 136 (184)
T ss_dssp ---------SSSEEEEEEEEEEETGTSTTHHHHHHHHHHHHCST-----------TSHHHHHHHTTTTSESEEEEEEEEE
T ss_pred ---------ccccccccccccccccccchhhHHHHHHHHHhcCc-----------cchhHHHHHhccccceEEEeeeecc
Confidence 146889999999887 8899999999999999763 3999999999999999999998878
Q ss_pred CCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHH
Q psy14217 387 ADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQL 433 (529)
Q Consensus 387 ~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l 433 (529)
.+.|.|.|++.+.+++++++++.+.++++++.+ |++++||+++|++|
T Consensus 137 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 137 RDSGLFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp SSEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred ccceEEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 889999999999999999999999999999987 79999999999875
No 16
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2.3e-19 Score=189.87 Aligned_cols=419 Identities=11% Similarity=0.075 Sum_probs=308.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEeecC---C-CeEEEEEEEccCCCCCCCCCCcHHHHH
Q psy14217 34 PPSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF---G-SFCTIGVIIDSGSRYEQPYPSGVSHFL 109 (529)
Q Consensus 34 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~---~-~~~~i~l~~~~G~~~e~~~~~Gla~ll 109 (529)
...+.+|.+|++||.....+... .....++...-..|.++|+.+.+ . |++.+.+.++......++....+..|.
T Consensus 474 ~~~l~lP~~N~fIp~~~~~~~~~--~~~~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~ 551 (937)
T COG1025 474 SIELSLPEPNPFIPDDVSLIKSE--KKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELY 551 (937)
T ss_pred cccccCCCCCCCCCccccccccc--cCCCCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHH
Confidence 34566888999999876553322 22233445555667888875432 4 999999999998888888878888888
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q psy14217 110 EKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFEL 189 (529)
Q Consensus 110 ~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el 189 (529)
..+++....++.+. ....|.+++...+..+..+++++.++.++.++..+.+.+..-.++++.|+..|+.+.+++
T Consensus 552 ~~la~dal~~~~y~------A~~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~ 625 (937)
T COG1025 552 AYLANDALDKLSYQ------ASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEEL 625 (937)
T ss_pred HHHHHHHHHhhhhH------HHhcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 88877765554332 233388899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc-CCchHHHHHHHHHHHcCCCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhh
Q psy14217 190 ENYQM-RPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKY 267 (529)
Q Consensus 190 ~~~~~-~p~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~ 267 (529)
+.... .| ...+.+.+...+-++++..-. ..+.+++++.+++.+|....+.+....+.++| ++.+++.++++..
T Consensus 626 ~~a~~~~p--~~~~~~~l~~l~~~~~~s~~e---~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~ 700 (937)
T COG1025 626 KNALTGKP--YRQALDGLTGLLQVPYWSREE---RRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETL 700 (937)
T ss_pred HhhhhcCC--HHHHHHHhhhhhCCCCcCHHH---HHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHH
Confidence 96554 34 677777777777665443322 26788999999999999999999999999999 9999988888866
Q ss_pred hccCCCccccccccccCCCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCC-CCCCchHHHHHHHhh
Q psy14217 268 FVDKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSH-QDPDFVPACVLNILM 346 (529)
Q Consensus 268 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~-~~~~~~~~~vl~~lL 346 (529)
...+++.... ....+..-...++.......... ++.+..++.+.. .. +.++.+...++.+++
T Consensus 701 ~~~l~~~~s~---------~~~~~~~~~~~~~~~~~e~~~~~-------~~~an~~i~~~~-~~~~~~~~a~s~Ll~~l~ 763 (937)
T COG1025 701 QKKLPAIGST---------WYRNPSVYLLKGGTRIFETVGGE-------SDSANAAILYPQ-QYDEIKSSALSSLLGQLI 763 (937)
T ss_pred HhhhcccCCc---------ccCCCceeccCCCeeEeeeccCC-------cccccceeEecc-ccchHHHHHHHHHHHHHH
Confidence 5555432110 00111111123333333222111 121222233322 22 334556667888888
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEEeC---CCCHHHHHHHHHHHHHHhcCCCCH
Q psy14217 347 GGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAP---PSNVKNIVDVLVKELVTMAGPIDA 423 (529)
Q Consensus 347 ~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~---p~~~~~~~~~i~~~l~~l~~~it~ 423 (529)
. -.+|.+||++++|+|-|++++....+...+.++++.+ |+.+.+.+..+.+.+.....++++
T Consensus 764 ~---------------~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~~ms~ 828 (937)
T COG1025 764 H---------------PWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELREMSE 828 (937)
T ss_pred h---------------HHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHHHHHHHHHhCCH
Confidence 8 7899999999999999999998887777777888754 445677777777777666668999
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCC--CCChhHHHHHHccCCHHHHHHHHHHhccCC----CeEEEEc
Q psy14217 424 DELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGH--RKRPSTYIESIENVTEDDIRRVASRLLTSQ----PSVAARG 497 (529)
Q Consensus 424 ~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~~i~~vT~edv~~~a~~~l~~~----~~~~v~G 497 (529)
++|+..|+.+++++.....+...++..+|..+ ..|. ++.++..++.++.+|.+++.++....+... ..+-+.|
T Consensus 829 e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~-~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~~g~~l~~~i~g 907 (937)
T COG1025 829 EDFEQIKKALINQILQPPQNLAEEASRLWKAF-GRGNLDFDHREKKIEAVKTLTKQKLLDFFENALSYEQGSKLLSHIRG 907 (937)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHh-ccCCCCcCcHHHHHHHHHhcCHHHHHHHHHHhhcccccceeeeeeec
Confidence 99999999999999999999999999999544 3444 477889999999999999999999998742 3345567
Q ss_pred C
Q psy14217 498 E 498 (529)
Q Consensus 498 ~ 498 (529)
+
T Consensus 908 ~ 908 (937)
T COG1025 908 Q 908 (937)
T ss_pred c
Confidence 3
No 17
>KOG0959|consensus
Probab=99.80 E-value=1.9e-16 Score=170.94 Aligned_cols=420 Identities=9% Similarity=0.033 Sum_probs=301.8
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCCCCCeEEEEcCCCCEEEEeecC---CCeEEEEEEEccCCCCCCCCCCcHHHHHHH
Q psy14217 35 PSFQQPPLSTPLPGLPKVHYSCVKDNDRNTQVTTLPNGLRVASENRF---GSFCTIGVIIDSGSRYEQPYPSGVSHFLEK 111 (529)
Q Consensus 35 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~---~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~ 111 (529)
+.+.+|..++.||.+........ +....++.+.-....+||+++.+ .|++.+.+.+...-....+...+++.++..
T Consensus 482 ~~l~lP~~nefI~t~f~~~~~~~-~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~ 560 (974)
T KOG0959|consen 482 PELHLPTPNEFIPTDFSILPAPI-PKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVR 560 (974)
T ss_pred ccccCCCCCcccccccccccccC-ccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHH
Confidence 45667888888886433221110 11222345555566899986543 489999999999888888889999999998
Q ss_pred HhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q psy14217 112 LAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELEN 191 (529)
Q Consensus 112 l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~ 191 (529)
++...... ........|..+..+.+..+..+++++.++++..+++.+.+++.+-.++++.|+..++.+.+++++
T Consensus 561 ~l~d~l~E------~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n 634 (974)
T KOG0959|consen 561 LLKDQLNE------YLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRN 634 (974)
T ss_pred HHHHHHhH------HHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh
Confidence 87664433 333445558889999999999999999999999999999999888889999999999999999997
Q ss_pred -hhcCCchHHHHHHHHHHHcCCCCCCCCCCCCCchhcCCCCHHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhc
Q psy14217 192 -YQMRPEQETLLMDMIHAAAYKDNTLGLPKLCPPASIGVINNNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFV 269 (529)
Q Consensus 192 -~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~i~~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~ 269 (529)
...+| ...+.+.+.-.+-...+..-. ..+.++.++.+++..|-..++++.-+.++|.| ++.+++..+++....
T Consensus 635 ~~~~~p--~~~a~~~~~lll~~~~W~~~e---~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d 709 (974)
T KOG0959|consen 635 HAFDNP--YQLANDYLLLLLEESIWSKEE---LLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLD 709 (974)
T ss_pred hhhccH--HHHHHHHHHHHhhccccchHH---HHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHh
Confidence 55555 455555555444333333222 26778889999999999999999999999999 999999997665555
Q ss_pred cCCCccccccccccCCCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcCC
Q psy14217 270 DKQPVWIQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGG 349 (529)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~ 349 (529)
.+ +.......+.............-..|....+....... ...+.+.+.++....+..+...+.++.+++.
T Consensus 710 ~l-~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~------~~ns~i~~~~Q~~~~~~~~~~~~~L~~~li~-- 780 (974)
T KOG0959|consen 710 IL-KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKT------DDNSCIEVYYQIGVQDTRDNAVLGLLEQLIK-- 780 (974)
T ss_pred hh-hccCCCCccccccccCcccceeccCCceEEEEcccccC------CCCceEEEEEEcccchhHHHHHHHHHHHHhc--
Confidence 44 21111100000000000011112234444333331111 2457777777763344457778899999998
Q ss_pred CCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEE--eCCCCHHHHHHHHHHHHHHhcCCCCHHHHH
Q psy14217 350 GSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHAS--APPSNVKNIVDVLVKELVTMAGPIDADELS 427 (529)
Q Consensus 350 ~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~--~~p~~~~~~~~~i~~~l~~l~~~it~~el~ 427 (529)
..+|+.||++.+++|-+++......+.-.+.|.++ ..++.++..|..+++.++.....+++++|+
T Consensus 781 -------------ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe 847 (974)
T KOG0959|consen 781 -------------EPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEIVEMSDEEFE 847 (974)
T ss_pred -------------cchHHhhhhHHhhCeEeeeeeeeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence 78999999999999999987765544444444455 345578888888887777766669999999
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCC-CCChhHHHHHHccCCHHHHHHHHHHhcc
Q psy14217 428 RAKKQLQSMLLMNLEARPAVFEDVGRQVLATGH-RKRPSTYIESIENVTEDDIRRVASRLLT 488 (529)
Q Consensus 428 ~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~i~~vT~edv~~~a~~~l~ 488 (529)
.-+..++.....+..+.......+|........ ++..+..++.++.+|.+|+..+...++.
T Consensus 848 ~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~ 909 (974)
T KOG0959|consen 848 KHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEALKKITKEDVINFFDEYIR 909 (974)
T ss_pred hhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 999999999999999998888888888765544 3666778899999999999999999986
No 18
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.77 E-value=2.6e-16 Score=167.62 Aligned_cols=395 Identities=15% Similarity=0.184 Sum_probs=254.4
Q ss_pred EEEEcCCCCEEEEeecC-CCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEee----E
Q psy14217 65 QVTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICD----C 139 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~----~ 139 (529)
....-.|..+|++.+.. .+.+++.++++.+.. .....+-+.-+...+...||.++ +..++...++.+-|.++ +
T Consensus 528 l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l-~~~llpyL~L~~~~l~~lgt~~~-~y~e~~~~i~~~TGgis~~~~~ 605 (978)
T COG1026 528 LETEVSNEAKVLHHDLFTNGITYLRLYFDLDML-PSELLPYLPLFAFALTNLGTETY-SYKELLNQIERHTGGISVSLSV 605 (978)
T ss_pred eeeeccCCcceEEeecCCCCeEEEEEEeecCCC-ChhhhhhHHHHHHHHHhcCCCCc-CHHHHHHHHHHHhCCceeeEee
Confidence 44555677888877664 579999999999554 33344555555656666788886 67789999888844333 3
Q ss_pred eecc-------ceEEEEEEecCCCHHHHHHHHHHhhcCCCC-CHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcC
Q psy14217 140 LSSR-------DTFIYAASAATSGLDTVMKILGDVVLRPKF-SKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAY 211 (529)
Q Consensus 140 ~t~~-------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f-~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~ 211 (529)
.++. ...++++.+..++.+++++++.+++.++.| +.+.+....++....+.....+.. ...+.......++
T Consensus 606 ~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG-~~~A~~~~~s~~~ 684 (978)
T COG1026 606 DTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSG-HSIASSLANSRLS 684 (978)
T ss_pred ccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccc-hHHHHHHhhcccc
Confidence 3332 357888999999999999999999999999 556565555555555554333311 2333333333333
Q ss_pred CCCCCCCCCCCCchh---cC--------CCC---HHHHHHHHHhhcCCCCeEEEEec-CCHHHHHHHHHhhhccCCCc-c
Q psy14217 212 KDNTLGLPKLCPPAS---IG--------VIN---NNTLFTYLKNYYTPTRMVVAGIG-VEHEALVEAANKYFVDKQPV-W 275 (529)
Q Consensus 212 ~~~~~~~~~~g~~~~---l~--------~i~---~~~l~~f~~~~~~~~~~~l~ivG-~~~~~l~~~i~~~f~~l~~~-~ 275 (529)
....+.....| ... |+ +.. .+.|++.+++.+..+|+.++++| .+. +.+.+++-|..+.+. .
T Consensus 685 ~~~~l~e~~~G-l~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~~--~~~~~e~~l~~~~~~~~ 761 (978)
T COG1026 685 SAGALKELLNG-LSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDIDK--ILDLLENPLLKFLEHLL 761 (978)
T ss_pred cchhHHHHhcC-hhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChhh--hHHHHHHHhhhhhcccC
Confidence 32222211111 111 11 111 35788899999999999777777 432 122233333322210 0
Q ss_pred ccccccccCCCCCCCCCCCcccCceeEEecCCCCCCCCCCCCcceeEEEEe--ccCCCCCCCchHHHHHHHhhcCCCCCC
Q psy14217 276 IQDKSLVLTDKPVIDTSSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGL--EGVSHQDPDFVPACVLNILMGGGGSFS 353 (529)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~--~~~~~~~~~~~~~~vl~~lL~~~~~f~ 353 (529)
.......++..+..+ ........+.+ +. +.++.+++| ...++.++|..++.|++.+|+.
T Consensus 762 ~~~~~~~~~~~~~~~--~~~~~~~~~ii--~~----------p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~----- 822 (978)
T COG1026 762 PGFELPTPPKNPHLD--LISSLSEATII--PS----------PVAYNALAFSIGGLPYTHPDYAALQVLSEYLGS----- 822 (978)
T ss_pred cccccCCCCCCcchh--hhccccceEEe--cc----------HHHHHHHhhhccCCCCCCccchHHHHHHHHhcc-----
Confidence 000000000001110 00000111111 11 113444555 4678999999999999999994
Q ss_pred CCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Q psy14217 354 AGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQ 432 (529)
Q Consensus 354 ~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~ 432 (529)
..||.+||++ |++|++++..... .|.|.++...+|+ +.+..+.+.+.++.+.. .++++++++++-.
T Consensus 823 ---------~~lw~~IR~~-GGAYGa~as~~~~--~G~f~f~sYRDPn-~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg 889 (978)
T COG1026 823 ---------GYLWNKIREK-GGAYGASASIDAN--RGVFSFASYRDPN-ILKTYKVFRKSVKDLASGNFDERDLEEAILG 889 (978)
T ss_pred ---------chhHHHHHhh-ccccccccccccC--CCeEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 6899999997 9999999877644 7899988888888 77778888888888887 4999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhcc---CCCeEEEEcC
Q psy14217 433 LQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLT---SQPSVAARGE 498 (529)
Q Consensus 433 l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~---~~~~~~v~G~ 498 (529)
.++.+... +++......-....+.+..++..+.+++.|.+||++||.++.++|+. ...+++++|.
T Consensus 890 ~i~~~d~p-~sp~~~~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~ 957 (978)
T COG1026 890 IISTLDTP-ESPASEGSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAG 957 (978)
T ss_pred hhcccccc-cCCcceehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEec
Confidence 99887654 45554433333333445445677888999999999999999999997 3678888875
No 19
>PTZ00432 falcilysin; Provisional
Probab=99.76 E-value=4.3e-16 Score=176.84 Aligned_cols=398 Identities=12% Similarity=0.047 Sum_probs=256.3
Q ss_pred EcCCCCEEEEeecCC-CeEEEEEEEccCCCCCCCCCCcHHHHHHHHhh-cCCCCCCCHHHHHHHHHHhCCEeeEe----e
Q psy14217 68 TLPNGLRVASENRFG-SFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAF-NSTSEYVNKDAIAQSLEKIGGICDCL----S 141 (529)
Q Consensus 68 ~L~NGl~v~~~~~~~-~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~-~g~~~~~~~~~l~~~l~~~g~~~~~~----t 141 (529)
...+|+.|+..+-+. ..+++.++++.... +.+...+..|+..++. .||.++ +.+++...++..-|.++++ +
T Consensus 664 ~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l--~~e~~~yl~L~~~~l~~~gT~~~-s~~el~~~i~~~tGg~~~~~~~~~ 740 (1119)
T PTZ00432 664 SDGGSVTVLVHPIESRGILYLDFAFSLDSL--TVDELKYLNLFKALLKENGTDKL-SSEEFTYKREKNLGGLSASTAFYS 740 (1119)
T ss_pred ccCCCcceEEEecCCCCeEEEEEEecCCCC--CHHHHhhHHHHHHHHHhcCCCCC-CHHHHHHHHHHhCCCeEEEEEEec
Confidence 346789998776554 69999999999876 3344555556655554 477775 7889999999885544432 2
Q ss_pred c------------cceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHH-HHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q psy14217 142 S------------RDTFIYAASAATSGLDTVMKILGDVVLRPKFSKEE-INMARQTIQFELENYQMRPEQETLLMDMIHA 208 (529)
Q Consensus 142 ~------------~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~-~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~ 208 (529)
+ .....++++++.++++++++++.+++.++.|++.+ +....+.....+++...+.. -..+...+.
T Consensus 741 ~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~G-h~~A~~~~~- 818 (1119)
T PTZ00432 741 ETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKG-HKFALKRMK- 818 (1119)
T ss_pred cccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHH-
Confidence 2 23688899999999999999999999999998764 55555555555553322111 122221111
Q ss_pred HcCC------CCCCCCCCCCCchhcC-C-C------CHHHHHHHHHhhcCCCCeEEEEec-C-CHHHHHHHHHhhhccCC
Q psy14217 209 AAYK------DNTLGLPKLCPPASIG-V-I------NNNTLFTYLKNYYTPTRMVVAGIG-V-EHEALVEAANKYFVDKQ 272 (529)
Q Consensus 209 ~~~~------~~~~~~~~~g~~~~l~-~-i------~~~~l~~f~~~~~~~~~~~l~ivG-~-~~~~l~~~i~~~f~~l~ 272 (529)
.-+. +...|...+-.+..+. . . -.+.|.+.+++.|..+|+.+.++| . ..+.+.+.+..++..++
T Consensus 819 s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~ 898 (1119)
T PTZ00432 819 SKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLS 898 (1119)
T ss_pred hcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhcc
Confidence 1111 0011111000011111 0 1 134578889999999999999999 5 45677776666776654
Q ss_pred CccccccccccCCCCCC----CC-CCCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhc
Q psy14217 273 PVWIQDKSLVLTDKPVI----DT-SSATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMG 347 (529)
Q Consensus 273 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~ 347 (529)
........... ..+.. .. ...........+ .+. ...++..+.....+.+++..++.|+..+|.
T Consensus 899 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~-~p~----------~V~yv~~~~~~~~~~~~~~~~l~Vl~~~L~ 966 (1119)
T PTZ00432 899 STFKENDNKSS-DKVWVKEVLDKKLMESVDKNEFIV-LPT----------RVNFVGMGGKLFDKSDKVDGSFQVIVHYLK 966 (1119)
T ss_pred ccccccccccc-ccccccccccccccCCcccceEEE-ccC----------ceeEEEEecccccCCCccCHHHHHHHHHHc
Confidence 21100000000 00000 00 000000111111 111 234556654434456677999999999999
Q ss_pred CCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC---CCCHH
Q psy14217 348 GGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG---PIDAD 424 (529)
Q Consensus 348 ~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~---~it~~ 424 (529)
. +.||++||++ |++|++++.+. ..|.|.++...+|. +.+.++.+.+..+-+++ .+|++
T Consensus 967 ~--------------~yLw~~IR~~-GGAYG~~~~~~---~~G~~~f~SYRDPn-~~~Tl~~f~~~~~~l~~~~~~~~~~ 1027 (1119)
T PTZ00432 967 N--------------SYLWKTVRMS-LGAYGVFADLL---YTGHVIFMSYADPN-FEKTLEVYKEVASALREAAETLTDK 1027 (1119)
T ss_pred c--------------ccchHHHccc-CCccccCCccC---CCCeEEEEEecCCC-HHHHHHHHHHHHHHHHhcCCCCCHH
Confidence 4 7899999997 99999986553 25899988888887 66666776666666655 39999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccC--CCeEEEEcCCCCC
Q psy14217 425 ELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS--QPSVAARGELINF 502 (529)
Q Consensus 425 el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~--~~~~~v~G~~~~i 502 (529)
++++++-..++.+.... ++...........+.+...+..+++++.|-++|++||+++|+++... ...++|+|+...+
T Consensus 1028 ~l~~~iig~~~~~D~p~-~p~~~g~~~~~~~l~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~~~~~~~v~g~~~~~ 1106 (1119)
T PTZ00432 1028 DLLRYKIGKISNIDKPL-HVDELSKLALLRIIRNESDEDRQKFRKDILETTKEDFYRLADLMEKSKEWEKVIAVVNSKTS 1106 (1119)
T ss_pred HHHHHHHHHHhccCCCC-ChHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccCeEEEEECHHHh
Confidence 99999999998887644 55555544444456566668889999999999999999999999974 4688999986554
No 20
>KOG2019|consensus
Probab=99.67 E-value=7.8e-14 Score=141.34 Aligned_cols=390 Identities=15% Similarity=0.119 Sum_probs=248.3
Q ss_pred EEEEcCCCCEEEEeecC-CCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCE--eeEee
Q psy14217 65 QVTTLPNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGI--CDCLS 141 (529)
Q Consensus 65 ~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~--~~~~t 141 (529)
..+..-||++|...+.. ...+++.+.+..++.-+. -.+-+.-+.+.++..||... +..++.+.+..+.|. ++..+
T Consensus 562 ~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~e-L~PylPlfc~sll~lGt~~l-sf~el~qqI~rkTGGiS~~p~~ 639 (998)
T KOG2019|consen 562 LEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEE-LLPYLPLFCQSLLNLGTGDL-SFVELEQQIGRKTGGISVSPLV 639 (998)
T ss_pred eeeeeccCceeEEeeccCCceEEEEEeeccccCcHH-hhcchHHHHHHHHhcCCCcc-cHHHHHHHhhhhcCceeeccee
Confidence 45567799999987665 469999999999986432 23567788889999999885 777999999888444 33333
Q ss_pred ccc--------eEEEEEEecCCCHHHHHHHHHHhhcCCCCCHH-HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCC
Q psy14217 142 SRD--------TFIYAASAATSGLDTVMKILGDVVLRPKFSKE-EINMARQTIQFELENYQMRPEQETLLMDMIHAAAYK 212 (529)
Q Consensus 142 ~~~--------~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~-~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~ 212 (529)
..+ .+.++..+...+.+.+++++..++.++.|+++ .|+........++.+.-.+. ...+...-..+.+.
T Consensus 640 ~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~ds--GH~~A~~rs~a~l~ 717 (998)
T KOG2019|consen 640 SSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADS--GHGFAAARSAAMLT 717 (998)
T ss_pred ccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCcc--cchhHhhhhhcccC
Confidence 222 35666777788999999999999999999854 34444444444444322221 11222221222222
Q ss_pred -CCCCCCCCCCCchhcCCC------C-------HHHHHHHHHhhcCCCCeEEEEec--CCHHHHHHHHHhhhccCCCccc
Q psy14217 213 -DNTLGLPKLCPPASIGVI------N-------NNTLFTYLKNYYTPTRMVVAGIG--VEHEALVEAANKYFVDKQPVWI 276 (529)
Q Consensus 213 -~~~~~~~~~g~~~~l~~i------~-------~~~l~~f~~~~~~~~~~~l~ivG--~~~~~l~~~i~~~f~~l~~~~~ 276 (529)
..+... ..|-.+.++=+ . .+.|.+..+.+...++|.+.|.. ..+..+++.+++++..+|.-.+
T Consensus 718 ~ag~i~E-qlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp~e~p 796 (998)
T KOG2019|consen 718 PAGWISE-QLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLPRENP 796 (998)
T ss_pred cccchHh-HhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCcccchhHHHHHHHHHHhccccCC
Confidence 111111 11212222111 1 13455566666678999999986 8889999999999988773111
Q ss_pred cccccccCCCCCCCCC-CCcccCceeEEecCCCCCCCCCCCCcceeEEEEeccCCCCCCCchHHHHHHHhhcCCCCCCCC
Q psy14217 277 QDKSLVLTDKPVIDTS-SATYTGGIVKEECNIPTFAGTSGLPELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAG 355 (529)
Q Consensus 277 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~~~f~~~ 355 (529)
. .+..... .-+.....+++..+. -+..++.-+..+.+++++|-.++.|++.+|.+
T Consensus 797 ~--------g~~st~d~r~p~~~~~i~~~~P~---------fqvnyvgka~~~vpyt~~d~asl~vlS~~lt~------- 852 (998)
T KOG2019|consen 797 S--------GSKSTWDARLPLRSEAIRVVIPT---------FQVNYVGKAGLGVPYTHPDGASLQVLSKLLTN------- 852 (998)
T ss_pred C--------CCccCccccCCCCceeEEEeccc---------cchhhhhhhcccccCCCCCCcHHHHHHHHHHH-------
Confidence 1 0111100 001111122222111 01234444455678899999999999999995
Q ss_pred CCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHH
Q psy14217 356 GPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQ 434 (529)
Q Consensus 356 ~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~ 434 (529)
.+|+.+||++ |.+|+.++.+... .|+|.++...+|. .-+.++.+...-+-++. .++++.|++||-...
T Consensus 853 -------k~Lh~evRek-GGAYGgg~s~~sh--~GvfSf~SYRDpn-~lktL~~f~~tgd~~~~~~~~~~dldeAkl~~f 921 (998)
T KOG2019|consen 853 -------KWLHDEVREK-GGAYGGGCSYSSH--SGVFSFYSYRDPN-PLKTLDIFDGTGDFLRGLDVDQQDLDEAKLGTF 921 (998)
T ss_pred -------HHHHHHHHHh-cCccCCccccccc--cceEEEEeccCCc-hhhHHHhhcchhhhhhcCCccccchhhhhhhhc
Confidence 7999999998 8899998877654 8999999998887 33334444444444444 499999999999888
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhccC-C--CeEEEEcC
Q psy14217 435 SMLLMNLEARPAVFEDVGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLTS-Q--PSVAARGE 498 (529)
Q Consensus 435 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~~-~--~~~~v~G~ 498 (529)
++..... .+.. ..+ ..++.+-..+..+..++.|-+++..|+.++|++|+.. + ..+++.|+
T Consensus 922 ~~VDap~-~P~~--kG~-~~fl~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~vav~g~ 984 (998)
T KOG2019|consen 922 GDVDAPQ-LPDA--KGL-LRFLLGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAVAVAGP 984 (998)
T ss_pred ccccCCc-CCcc--cch-HHHHhcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEEEeeCc
Confidence 7764433 2221 223 2334444455667778999999999999999999963 3 34455554
No 21
>KOG0961|consensus
Probab=99.12 E-value=6.7e-09 Score=106.00 Aligned_cols=402 Identities=12% Similarity=0.088 Sum_probs=234.8
Q ss_pred CCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHh------hcCCCCCCC---HHHHHHHHHHhCCEeeEe-----eccceE
Q psy14217 81 FGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLA------FNSTSEYVN---KDAIAQSLEKIGGICDCL-----SSRDTF 146 (529)
Q Consensus 81 ~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~------~~g~~~~~~---~~~l~~~l~~~g~~~~~~-----t~~~~~ 146 (529)
+...+.+..+++.-+.. ....-.-.+...++ ..|+..-+. .+++.+.+.......+.. +-++..
T Consensus 559 ps~Fvel~fl~dss~i~--~sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lv 636 (1022)
T KOG0961|consen 559 PSKFVELFFLLDSSNIS--ISLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLV 636 (1022)
T ss_pred chHHHhHhhhhccccCc--hhhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhhe
Confidence 44566666666665543 22222233333333 345443332 345555554433322222 346678
Q ss_pred EEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCC--CCCc
Q psy14217 147 IYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK--LCPP 224 (529)
Q Consensus 147 ~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~--~g~~ 224 (529)
++.++|.+++.+...+++...+....|+++.+....+.++.++..++.+- ...+.......+|+...+.... +--+
T Consensus 637 n~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg--~~vlss~~~~~lY~~~slk~s~d~L~~E 714 (1022)
T KOG0961|consen 637 NLRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDG--CTVLSSAVASMLYGKNSLKISFDELVLE 714 (1022)
T ss_pred eEEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCc--cEehHHHHHHHHhcccchhhcccHHHHH
Confidence 99999999999999999999999999999999999999988888766543 5677778888888876654322 1101
Q ss_pred hhcCCCC----------HHHHHHHHHhhcCCCCeEEEEec-CCH-HHHHHHHHhhhccCCCccccccccccCCCCCCCCC
Q psy14217 225 ASIGVIN----------NNTLFTYLKNYYTPTRMVVAGIG-VEH-EALVEAANKYFVDKQPVWIQDKSLVLTDKPVIDTS 292 (529)
Q Consensus 225 ~~l~~i~----------~~~l~~f~~~~~~~~~~~l~ivG-~~~-~~l~~~i~~~f~~l~~~~~~~~~~~~~~~~~~~~~ 292 (529)
.-++.|. .+.+....+-...-+.+.+.++| ++. +....-....+.+..-+.+... .. .+......
T Consensus 715 k~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~-f~--~tf~~~~~ 791 (1022)
T KOG0961|consen 715 KLLEEISKDVMNNPEAILEKLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQ-FS--ATFEAGEN 791 (1022)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccCCchhh-cc--cccccCcc
Confidence 1112211 12222222211224668888889 752 2211112222222110000000 00 00000000
Q ss_pred CCcccC---ceeEEecCCCCCCCCCCCCcceeEEEEecc-CCCCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHH
Q psy14217 293 SATYTG---GIVKEECNIPTFAGTSGLPELSHVVIGLEG-VSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTN 368 (529)
Q Consensus 293 ~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~v~i~~~~-~~~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~ 368 (529)
.+...| ..+.+ .+ |..+.+.+...-++ .+|.++..+...++.++|+.-. .++|+.
T Consensus 792 ~s~e~gsssk~~~I--~~-------p~sESs~l~~sip~~~~w~dpel~~~~l~~~YL~~~e------------GPfW~~ 850 (1022)
T KOG0961|consen 792 VSLELGSSSKELLI--GV-------PGSESSFLYQSIPLDANWNDPELIPAMLFGQYLSQCE------------GPFWRA 850 (1022)
T ss_pred cceeccCCcceeEe--cC-------CCccccceeeecccccccCCcchhHHHHHHHHHHhcc------------cchhhh
Confidence 000001 11111 11 12234555555554 5799999999999999999533 689999
Q ss_pred HhhhcCceeEEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhcCChH
Q psy14217 369 VLNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAG---PIDADELSRAKKQLQSMLLMNLEARP 445 (529)
Q Consensus 369 lR~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~---~it~~el~~ak~~l~~~~~~~~~~~~ 445 (529)
||-. ||+|++..+..+.++.-.|.|+...++.+ +.+.-++.++++.. .+++.+|+-||......+.......-
T Consensus 851 IRG~-GLAYGanm~~~~d~~~~~~~iyr~ad~~k---aye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~ 926 (1022)
T KOG0961|consen 851 IRGD-GLAYGANMFVKPDRKQITLSIYRCADPAK---AYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTV 926 (1022)
T ss_pred hccc-chhccceeEEeccCCEEEEEeecCCcHHH---HHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccce
Confidence 9997 99999999888776666667776655554 44444555555544 39999999999999887754432211
Q ss_pred -HHHHH-HHHHHHhcCCCCChhHHHHHHccCCHHHHHHHHHHhcc----CCCeEEEEcCCCCCCCHHHHHHHhhcCCC
Q psy14217 446 -AVFED-VGRQVLATGHRKRPSTYIESIENVTEDDIRRVASRLLT----SQPSVAARGELINFPSYEDIHSGIQNNGV 517 (529)
Q Consensus 446 -~~~~~-l~~~~l~~~~~~~~~~~~~~i~~vT~edv~~~a~~~l~----~~~~~~v~G~~~~ip~~~~~~~~~~~~~~ 517 (529)
..+.. +..... ......-..+++.|.+||.+|+.+.-+.|+. ++..++++. ....+++++++++...|+
T Consensus 927 ~~a~~~~~l~~~~-q~~~~fn~~~leri~nvT~~~~~~~~~~y~~~~Fds~~~va~i~--~hpaKle~~~e~F~e~gf 1001 (1022)
T KOG0961|consen 927 SGAAKISILNNFR-QTPHPFNIDLLERIWNVTSEEMVKIGGPYLARLFDSKCFVASIA--VHPAKLEEMKEAFPEGGF 1001 (1022)
T ss_pred echHHHHHHHHHH-hcCCcccHHHHHHHHHhhHHHHHHhcccceehhhcccCceEEEe--ccHHHHHHHHHHhhcCCc
Confidence 11122 222222 2223455778999999999999999999875 444454442 245678899999886665
No 22
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=97.92 E-value=0.00016 Score=71.79 Aligned_cols=183 Identities=13% Similarity=0.156 Sum_probs=113.2
Q ss_pred EEcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceE
Q psy14217 67 TTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTF 146 (529)
Q Consensus 67 ~~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~ 146 (529)
+.|+||+||...+.-...+++++. +.|.-.|-.+-.|+||||||.+-+ |.+ ..+ ..||+|.+.++
T Consensus 2 IvL~NGVRiFin~~M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~-~~F---------~ANASTaRsYM 66 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS-SKF---------LANASTARSYM 66 (590)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cch-HHh---------hcccchhhhhh
Confidence 579999999998876667888776 677777777889999999999855 322 122 24899999999
Q ss_pred EEEEEecCCC-HHHHHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHcCCCCCCCCCC
Q psy14217 147 IYAASAATSG-LDTVMKILGDVVLR-----PKFSKEEINMARQTIQFELENYQMRPEQETLLMDMIHAAAYKDNTLGLPK 220 (529)
Q Consensus 147 ~~~~~~~~~~-l~~~l~ll~~~l~~-----p~f~~~~~~~~k~~~~~el~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~ 220 (529)
.|-++..+.. -.++++.+..+++. ..|+...++...+.+..|.-=+ + . ...+++.+.-+. +|.-|.
T Consensus 67 SFWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFR-n--E-vfHCmDvLtfL~-gGDLYN--- 138 (590)
T PF03410_consen 67 SFWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFR-N--E-VFHCMDVLTFLG-GGDLYN--- 138 (590)
T ss_pred hhhhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhh-h--h-HHHHHHHHHHhc-CCcccC---
Confidence 9988887544 44555555555533 3455555544444433332211 1 1 345666654333 333332
Q ss_pred CCCchhcCCCC--HHHHHHHHHhhcCCCCeEEEEecCCHHHHHHHHHhhhccCCCc
Q psy14217 221 LCPPASIGVIN--NNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPV 274 (529)
Q Consensus 221 ~g~~~~l~~i~--~~~l~~f~~~~~~~~~~~l~ivG~~~~~l~~~i~~~f~~l~~~ 274 (529)
.|...-+.+++ ++-|.+-.++.- ..|+++++--+++ .+..++++.||.+|.-
T Consensus 139 GGRi~ML~~l~~i~~mL~~RM~~I~-GpniVIFVk~l~~-~~l~lL~~TFGtLP~c 192 (590)
T PF03410_consen 139 GGRIDMLNNLNDIRNMLSNRMHRII-GPNIVIFVKELNP-NILSLLSNTFGTLPSC 192 (590)
T ss_pred CchHHHHhhhHHHHHHHHHHHHhhc-CCcEEEEEeccCH-HHHHHHHHhcCCCCCC
Confidence 33345555543 233444444433 4467777744774 4678999999998853
No 23
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=97.89 E-value=0.0013 Score=71.48 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=107.6
Q ss_pred cceeEEEEeccCCCCCC--CchHHHHHHHhhcCCCCCCCCCCCCCcccH-HHHHHhhhcCceeEEEEeccccCCcccEEE
Q psy14217 318 ELSHVVIGLEGVSHQDP--DFVPACVLNILMGGGGSFSAGGPGKGMYTR-LYTNVLNRHHWMFSATAYNHAYADTGLFCI 394 (529)
Q Consensus 318 ~~~~v~i~~~~~~~~~~--~~~~~~vl~~lL~~~~~f~~~~~g~g~~sr-L~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i 394 (529)
+.+.+.+.+...+..++ ....-.++..+|..|. +.+... =+.+..++.|..++++.... ...+
T Consensus 20 p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT--------~~~~~~~~i~~~le~lGG~lNA~Ts~d------~T~y 85 (696)
T TIGR02110 20 KRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGG--------ERFQGDDRLMPWVQRQGGQVNATTLER------TTAF 85 (696)
T ss_pred CEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCC--------CCCCcHHHHHHHHHHhCCeEEEEEcCC------eEEE
Confidence 34667777776554443 2344567777776432 112232 23444566777766665432 3355
Q ss_pred EEEeCCCCHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCC-C-ChhHHHHHH
Q psy14217 395 HASAPPSNVKNIVDVLVKELVTMAGP-IDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR-K-RPSTYIESI 471 (529)
Q Consensus 395 ~~~~~p~~~~~~~~~i~~~l~~l~~~-it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~-~~~~~~~~i 471 (529)
++.+.+++.+++++.+.+.+ .++ ++++++++.|..++..+....+++..++.......+..+.+ . ...-..+.|
T Consensus 86 ~~~v~~~~l~~aL~lLaD~l---~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL 162 (696)
T TIGR02110 86 FFELPAAALAAGLARLCDML---ARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSL 162 (696)
T ss_pred EEEecHHHHHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 66777888888887776555 444 99999999999999999998888877766655554433321 1 111123445
Q ss_pred cc---CCHHHHHHHHHHhccC-CCeEEEEcCC
Q psy14217 472 EN---VTEDDIRRVASRLLTS-QPSVAARGEL 499 (529)
Q Consensus 472 ~~---vT~edv~~~a~~~l~~-~~~~~v~G~~ 499 (529)
++ +|.+||+++.++++.+ +.+++|+||.
T Consensus 163 ~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdv 194 (696)
T TIGR02110 163 ALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQ 194 (696)
T ss_pred hCcccchHHHHHHHHHHhcchhcEEEEEEeCC
Confidence 54 5599999999999987 6788999995
No 24
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=97.85 E-value=0.00036 Score=72.90 Aligned_cols=177 Identities=16% Similarity=0.153 Sum_probs=118.3
Q ss_pred eeEEEEec-cCCCC-CCCchHHHHHHHhhcCCCCCCCCCCCCCccc-HHHHHHhhhcCceeEEEEeccccCCcccEEEEE
Q psy14217 320 SHVVIGLE-GVSHQ-DPDFVPACVLNILMGGGGSFSAGGPGKGMYT-RLYTNVLNRHHWMFSATAYNHAYADTGLFCIHA 396 (529)
Q Consensus 320 ~~v~i~~~-~~~~~-~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~s-rL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~ 396 (529)
..+.+.+. |.... ........++.+++..|.. +-.+ -+.+. -++.|....++..+. ...+ ++
T Consensus 39 vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~--------~~~~~~i~~~-~~~~G~~~na~ts~d----~t~y--~~ 103 (438)
T COG0612 39 VSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTT--------GLPSAELAEA-FEKLGGQLNAFTSFD----YTVY--YL 103 (438)
T ss_pred EEEEEEEeecccCCCCCcccHHHHHHHHHccCCC--------CCChHHHHHH-HHHhcCeeeccccch----hhhh--hh
Confidence 45555555 32222 2234456788888864421 0001 34444 344565544433222 1122 23
Q ss_pred EeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCC--CChhHHHHHHccC
Q psy14217 397 SAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR--KRPSTYIESIENV 474 (529)
Q Consensus 397 ~~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~i~~v 474 (529)
.+.+++.+++++.+.+.+..- -+++++|++.|+.++..+.+..+.+...+.......+..+.+ ..+.-..+.|.++
T Consensus 104 ~~l~~~~~~~l~llad~l~~p--~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~i 181 (438)
T COG0612 104 SVLPDNLDKALDLLADILLNP--TFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAI 181 (438)
T ss_pred hhchhhhHHHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHhC
Confidence 356788899888888777433 399999999999999999999999988777666666555443 2234357899999
Q ss_pred CHHHHHHHHHHhccC-CCeEEEEcCCCCCCCHHHHHHHhh
Q psy14217 475 TEDDIRRVASRLLTS-QPSVAARGELINFPSYEDIHSGIQ 513 (529)
Q Consensus 475 T~edv~~~a~~~l~~-~~~~~v~G~~~~ip~~~~~~~~~~ 513 (529)
|++|++++.++|+.+ +.+++++||...---.+.+++.+.
T Consensus 182 t~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~ 221 (438)
T COG0612 182 TREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFG 221 (438)
T ss_pred CHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHc
Confidence 999999999999998 688999999866666666677666
No 25
>PHA03081 putative metalloprotease; Provisional
Probab=97.63 E-value=0.00037 Score=69.44 Aligned_cols=186 Identities=15% Similarity=0.189 Sum_probs=112.7
Q ss_pred EEcCCCCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEeeccceE
Q psy14217 67 TTLPNGLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLSSRDTF 146 (529)
Q Consensus 67 ~~L~NGl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t~~~~~ 146 (529)
++|+||++|...+.-...+++++. +.|.-.+-.+-.|+||++||.+-+ |.+ ..+ ..|++|.+.++
T Consensus 2 i~~~ngvr~f~~~~m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~----fd~-~~f---------~anast~r~ym 66 (595)
T PHA03081 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS-SKF---------VANASTARSYM 66 (595)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cch-HHh---------cccchhhhhhH
Confidence 579999999998876666777765 667777777889999999999755 321 111 24789999999
Q ss_pred EEEEEecCCC-HHHHHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHH-hhcCCchHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy14217 147 IYAASAATSG-LDTVMKILGDVVLRPKFSKEEINMAR-QTIQFELEN-YQMRPEQETLLMDMIHAAAYKDNTLGLPKLCP 223 (529)
Q Consensus 147 ~~~~~~~~~~-l~~~l~ll~~~l~~p~f~~~~~~~~k-~~~~~el~~-~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~g~ 223 (529)
.|-++..+.. ..+++..+..+++.+.--...|...+ +.-..|+++ ..-+-. ...+++.+.-+. +|.-|. .|.
T Consensus 67 sfwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRnE-vfHCmDvLTfL~-gGDLYN---GGR 141 (595)
T PHA03081 67 SFWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRNE-VFHCMDVLTFLG-GGDLYN---GGR 141 (595)
T ss_pred hHhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhhh-hHHHHHHHHHhc-CCcccC---Cch
Confidence 9988776433 46777777777766543333333322 222333332 111101 345666654332 333332 344
Q ss_pred chhcCCCC--HHHHHHHHHhhcCCCCeEEEEecCCHHHHHHHHHhhhccCCCc
Q psy14217 224 PASIGVIN--NNTLFTYLKNYYTPTRMVVAGIGVEHEALVEAANKYFVDKQPV 274 (529)
Q Consensus 224 ~~~l~~i~--~~~l~~f~~~~~~~~~~~l~ivG~~~~~l~~~i~~~f~~l~~~ 274 (529)
...|++++ ++-|.+-.++. ...|+++++=-+++ .+..++.+.||.+|.-
T Consensus 142 i~ML~~l~~i~~~L~~RM~~I-~GpniVIFVk~ln~-~~l~lL~~TFGtLP~~ 192 (595)
T PHA03081 142 IDMLDNLNDVRDMLSNRMHRI-SGPNIVIFVKELNP-NTLSLLNNTFGTLPSC 192 (595)
T ss_pred HHHHhhhHHHHHHHHHHHHhh-cCCcEEEEEeccCH-HHHHHHHHhcCCCCCC
Confidence 55555543 13333333333 34467777744774 4678999999998853
No 26
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=97.27 E-value=0.0061 Score=58.26 Aligned_cols=114 Identities=12% Similarity=0.175 Sum_probs=76.9
Q ss_pred CCCCEEEEeecC-CCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHHHhCCEeeEee----cc-
Q psy14217 70 PNGLRVASENRF-GSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLEKIGGICDCLS----SR- 143 (529)
Q Consensus 70 ~NGl~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~~~g~~~~~~t----~~- 143 (529)
.+|++|++.+.+ .+.+++.++++.+...+ .+..-+.-|..-+...||.++ +..++...+..+-|.+++++ +.
T Consensus 76 ~~~~~v~~~~~~TnGI~Y~~l~fdl~~l~~-e~l~yl~Ll~~ll~~lgT~~~-sy~el~~~i~~~tGGis~~~~~~~~~~ 153 (248)
T PF08367_consen 76 LGGIPVLFHEQPTNGIVYVRLYFDLSDLPE-EDLPYLPLLTDLLGELGTKNY-SYEELSNEIDLYTGGISFSIEVYTDYD 153 (248)
T ss_dssp CTTCEEEEEE---TTEEEEEEEEE-TTS-C-CCHCCHHHHHHHCCCS-BSSS--HHHHHHHHHHHSSEEEEEEEEEEEEC
T ss_pred cCCccEEEEEcCCCCeEEEEEEecCCCCCH-HHHHhHHHHHHHHHhCCCCCC-CHHHHHHHHHHhCCCeEEEeeeccCCC
Confidence 378999976554 58999999999986532 233444444443344588886 78899999999866555443 11
Q ss_pred ------ceEEEEEEecCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy14217 144 ------DTFIYAASAATSGLDTVMKILGDVVLRPKFSKEEINMARQTIQF 187 (529)
Q Consensus 144 ------~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f~~~~~~~~k~~~~~ 187 (529)
....++++|+.++++++++++.+++.++.|++.+ +.+..+.+
T Consensus 154 ~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~--rl~~ll~~ 201 (248)
T PF08367_consen 154 DDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKE--RLKELLKE 201 (248)
T ss_dssp TECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HH--HHHHHHHH
T ss_pred CccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHH--HHHHHHHH
Confidence 1578889999999999999999999999998774 44444433
No 27
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=95.98 E-value=0.32 Score=42.23 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=81.1
Q ss_pred cceeEEEEeccCCCCC-CC-chHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEE
Q psy14217 318 ELSHVVIGLEGVSHQD-PD-FVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIH 395 (529)
Q Consensus 318 ~~~~v~i~~~~~~~~~-~~-~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~ 395 (529)
+...+.+.+.+.+..+ ++ .-...++..++..++ +++.+.-..+..++.|..+++.... ..+.++
T Consensus 11 ~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs--------~~~~~~~l~~~l~~~G~~~~~~t~~------d~t~~~ 76 (149)
T PF00675_consen 11 PVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGS--------KKYSSDELQEELESLGASFNASTSR------DSTSYS 76 (149)
T ss_dssp SEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBB--------SSSBHHHHHHHHHHTTCEEEEEEES------SEEEEE
T ss_pred CEEEEEEEEeeccCCCCCCCCchhhhhhhhccccc--------chhhhhhhHHHhhhhccccceEecc------cceEEE
Confidence 4577888887654433 32 345567777666432 1222433334456678887666542 345667
Q ss_pred EEeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhc
Q psy14217 396 ASAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLAT 458 (529)
Q Consensus 396 ~~~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~ 458 (529)
+.+..++.+++++.+.+.+..- .++++++++.|..++..+....+++...+.......+..
T Consensus 77 ~~~~~~~~~~~l~~l~~~~~~P--~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~ 137 (149)
T PF00675_consen 77 ASVLSEDLEKALELLADMLFNP--SFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFR 137 (149)
T ss_dssp EEEEGGGHHHHHHHHHHHHHSB--GGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred EEEecccchhHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhc
Confidence 7777888888888887766432 399999999999999999988777756555555554443
No 28
>KOG0960|consensus
Probab=94.66 E-value=0.2 Score=49.52 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=77.9
Q ss_pred EEEEEeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCC--CChhHHHHH
Q psy14217 393 CIHASAPPSNVKNIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHR--KRPSTYIES 470 (529)
Q Consensus 393 ~i~~~~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~ 470 (529)
..|+.+-++++.++++.+.+++..- .+.+.++++-|..++.......+......-+........+.+ ....-..+.
T Consensus 116 ~yyakal~~dv~kavdiLaDIlqns--~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~en 193 (467)
T KOG0960|consen 116 VYYAKALSKDVPKAVDILADILQNS--KLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSEN 193 (467)
T ss_pred eeehhhccccchHHHHHHHHHHHhC--ccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhh
Confidence 4566778889999999888866432 489999999999999888776665544433333333334443 233455789
Q ss_pred HccCCHHHHHHHHHHhccC-CCeEEEEcCCC
Q psy14217 471 IENVTEDDIRRVASRLLTS-QPSVAARGELI 500 (529)
Q Consensus 471 i~~vT~edv~~~a~~~l~~-~~~~~v~G~~~ 500 (529)
|++++.+|++.++++.+.+ +++++..|..+
T Consensus 194 I~si~r~DL~~yi~thY~~~RmVlaaaGgV~ 224 (467)
T KOG0960|consen 194 IKSISRADLKDYINTHYKASRMVLAAAGGVK 224 (467)
T ss_pred hhhhhHHHHHHHHHhcccCccEEEEecCCcC
Confidence 9999999999999998875 78888888643
No 29
>KOG2067|consensus
Probab=94.03 E-value=0.16 Score=50.20 Aligned_cols=147 Identities=12% Similarity=0.158 Sum_probs=97.5
Q ss_pred hhhcCceeEEEEeccccCCcccEEEEEEeCCCCHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhcCChHHHH
Q psy14217 370 LNRHHWMFSATAYNHAYADTGLFCIHASAPPSNVKNIVDVLVKELVTMAGP-IDADELSRAKKQLQSMLLMNLEARPAVF 448 (529)
Q Consensus 370 R~~~gl~Y~~~a~~~~~~~~g~f~i~~~~~p~~~~~~~~~i~~~l~~l~~~-it~~el~~ak~~l~~~~~~~~~~~~~~~ 448 (529)
.|+.|..|.|++.-... .-.+++..+.++.+++.+.+.+ +.+ ++++|++.+|..+.-.+..-...+....
T Consensus 90 LE~~GGn~~cqsSRetm------~Yaas~~~~~v~sm~~lLadtV---~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL 160 (472)
T KOG2067|consen 90 LEKLGGNCDCQSSRETM------MYAASADSDGVDSMVELLADTV---LNPKFTDQEVEEARRAVKYEIEELWMRPEPLL 160 (472)
T ss_pred HHHhCCcccccccHhhh------HHHHHhhhcccHHHHHHHHHHH---hcccccHHHHHHHHHhhhheccccccCchhhH
Confidence 46789999998754321 1224456667888888776655 454 9999999999999877766666665555
Q ss_pred HHHHHHHHhcCC-CCChhH-HHHHHccCCHHHHHHHHHHhccC-CCeEEEEcCC-----------------CCCCCHHHH
Q psy14217 449 EDVGRQVLATGH-RKRPST-YIESIENVTEDDIRRVASRLLTS-QPSVAARGEL-----------------INFPSYEDI 508 (529)
Q Consensus 449 ~~l~~~~l~~~~-~~~~~~-~~~~i~~vT~edv~~~a~~~l~~-~~~~~v~G~~-----------------~~ip~~~~~ 508 (529)
-.+.......+. ...+.- ..+.|++|+.+.+..+.+.+..+ +.+++.+|=. ..+|..+..
T Consensus 161 ~e~iH~Aay~~ntlg~pl~cp~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~~~p~i~~~ 240 (472)
T KOG2067|consen 161 TEMIHSAAYSGNTLGLPLLCPEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPSTKVPPIDES 240 (472)
T ss_pred HHHHHHHHhccCcccccccCChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCccCCCCcccc
Confidence 445454444443 344322 25789999999999999999987 5777777722 125555555
Q ss_pred HHHhh-cCCCCCcceeec
Q psy14217 509 HSGIQ-NNGVLPRKGRIS 525 (529)
Q Consensus 509 ~~~~~-~~~~~~~~~~~~ 525 (529)
+.+.. +--+++++.+.+
T Consensus 241 ~aQYtGG~~~~~~d~~~~ 258 (472)
T KOG2067|consen 241 KAQYTGGELKIDTDAPQV 258 (472)
T ss_pred hhhccccccccCCCCccc
Confidence 55555 445566655443
No 30
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=80.70 E-value=18 Score=31.63 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=65.3
Q ss_pred CCEEEEeecCCCeEEEEEEEccCCCCCCCCCCcHHHHHHHHhhcCCCCCCCHHHHHHHHH-HhCCE--eeEeec--c--c
Q psy14217 72 GLRVASENRFGSFCTIGVIIDSGSRYEQPYPSGVSHFLEKLAFNSTSEYVNKDAIAQSLE-KIGGI--CDCLSS--R--D 144 (529)
Q Consensus 72 Gl~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~Gla~ll~~l~~~g~~~~~~~~~l~~~l~-~~g~~--~~~~t~--~--~ 144 (529)
+-.++..+.+.+...+.+.+...... .........++.+++..+.. + .+...+. ..|.. ++++.. . .
T Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~---s--~l~~~lr~~~~l~y~v~~~~~~~~~~~ 140 (184)
T PF05193_consen 67 GKEIVIPSKDESQSIVSIAFPGPPIK-DSKDYFALNLLSSLLGNGMS---S--RLFQELREKQGLAYSVSASNSSYRDSG 140 (184)
T ss_dssp EEEEEEEESSSSSEEEEEEEEEEETG-TSTTHHHHHHHHHHHHCSTT---S--HHHHHHHTTTTSESEEEEEEEEESSEE
T ss_pred cccccccccccccccccccccccccc-ccchhhHHHHHHHHHhcCcc---c--hhHHHHHhccccceEEEeeeeccccce
Confidence 34444444443666666676665552 23355677788888877522 2 5666666 55433 333322 2 3
Q ss_pred eEEEEEEecCCCHHHHHHHHHHhhcC---CCCCHHHHHHHHHHH
Q psy14217 145 TFIYAASAATSGLDTVMKILGDVVLR---PKFSKEEINMARQTI 185 (529)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~ll~~~l~~---p~f~~~~~~~~k~~~ 185 (529)
...+.+.+.+++++++++.+.+.+.. -.|++++|+++|+.+
T Consensus 141 ~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 141 LFSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 46666777777888888777766632 359999999988764
No 31
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=72.99 E-value=4.2 Score=24.78 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=17.0
Q ss_pred HHHHHhcC-C-CCHHHHHHHHHHHH
Q psy14217 412 KELVTMAG-P-IDADELSRAKKQLQ 434 (529)
Q Consensus 412 ~~l~~l~~-~-it~~el~~ak~~l~ 434 (529)
+.++.+.. | ||++|+++.|+.++
T Consensus 6 ~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 6 EKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 34444443 6 99999999998875
No 32
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=60.68 E-value=1.5e+02 Score=28.04 Aligned_cols=116 Identities=17% Similarity=0.160 Sum_probs=69.9
Q ss_pred cceeEEEEeccCCCCCCCchHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcC-ceeEEEEeccc---cCCcccEE
Q psy14217 318 ELSHVVIGLEGVSHQDPDFVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHH-WMFSATAYNHA---YADTGLFC 393 (529)
Q Consensus 318 ~~~~v~i~~~~~~~~~~~~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~g-l~Y~~~a~~~~---~~~~g~f~ 393 (529)
.-+++.+.|.....+.++..-+.++..+|+.-+. ++=-+..|-..+...-| +..++...... ......|.
T Consensus 90 GI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT------~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l~ 163 (248)
T PF08367_consen 90 GIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGT------KNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYLV 163 (248)
T ss_dssp TEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-B------SSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEEE
T ss_pred CeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCC------CCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccceeEEEE
Confidence 4688999999888888888889999999996422 11111334444433333 33333333222 22356678
Q ss_pred EEEEeCCCCHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHHHhc
Q psy14217 394 IHASAPPSNVKNIVDVLVKELVTMAGPIDAD-ELSRAKKQLQSMLLMNL 441 (529)
Q Consensus 394 i~~~~~p~~~~~~~~~i~~~l~~l~~~it~~-el~~ak~~l~~~~~~~~ 441 (529)
|++.|-.++++++++.+.+.+... .+++. .+........+.+....
T Consensus 164 is~k~L~~~~~~~~~ll~eil~~~--~f~d~~rl~~ll~~~~s~~~~~i 210 (248)
T PF08367_consen 164 ISAKCLDEKLDEAFELLSEILTET--DFDDKERLKELLKELKSDMESSI 210 (248)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHCB---TT-HHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeHhhhHHHHHHHHHHHHhcc--CCCcHHHHHHHHHHHHHHHHHhh
Confidence 888899999999999999888654 36554 45555555555544443
No 33
>KOG1374|consensus
Probab=59.81 E-value=25 Score=34.99 Aligned_cols=156 Identities=16% Similarity=0.163 Sum_probs=81.2
Q ss_pred CCCCCCCcccHHHHHHhhhcC----ceeEEEEeccccCC------cccEEEE-EEeCCCC----HHHHHHHHHHHHHHhc
Q psy14217 354 AGGPGKGMYTRLYTNVLNRHH----WMFSATAYNHAYAD------TGLFCIH-ASAPPSN----VKNIVDVLVKELVTMA 418 (529)
Q Consensus 354 ~~~~g~g~~srL~~~lR~~~g----l~Y~~~a~~~~~~~------~g~f~i~-~~~~p~~----~~~~~~~i~~~l~~l~ 418 (529)
|||.|.||.|.|.++|++++. .+|++........+ ..++++. ...+++. -..++..|.. +++.
T Consensus 142 AGGTGSGlGS~llErL~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~AL~ria~--~~l~ 219 (448)
T KOG1374|consen 142 AGGTGSGLGSFLLERLNDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTENSDCVVVLDNTALHRIAA--DRLH 219 (448)
T ss_pred cCCCCcchHHHHHHHHHHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhhCCCeEEEeccHHHHHHHH--HHhc
Confidence 588999999999999988543 47777654421111 1111110 0111221 1122222322 2233
Q ss_pred C-CCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----------cCCCCChhHHHHHHccCCHHHHHHHHHHh
Q psy14217 419 G-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLA-----------TGHRKRPSTYIESIENVTEDDIRRVASRL 486 (529)
Q Consensus 419 ~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~~~~~i~~vT~edv~~~a~~~ 486 (529)
. .+|=..++.....+.+.-......++++...+...... .+......+..... +++..-+-++.+++
T Consensus 220 i~~ptF~~iNqLvstims~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~tP~~sd~~~~~-~~rkttvldvmRrL 298 (448)
T KOG1374|consen 220 IQNPTFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYTPLTSDNSLAT-AVRKTTVLDVMRRL 298 (448)
T ss_pred CCCCCHHHHHHHHHHHHhhccccccchhhccCcHHHHHhhcCCCCCeeeeeccCCcccChhhhhh-hhhcchHHHHHHHH
Confidence 2 36656666666666665555555666655544432221 11100011111222 56777777888899
Q ss_pred ccCCCeEEEEcC-CCCCCCHHHHHHHh
Q psy14217 487 LTSQPSVAARGE-LINFPSYEDIHSGI 512 (529)
Q Consensus 487 l~~~~~~~v~G~-~~~ip~~~~~~~~~ 512 (529)
|.++..++..++ ....|++-.+-..+
T Consensus 299 L~pkn~mvs~~~~~~~~~~~~si~n~i 325 (448)
T KOG1374|consen 299 LQPKNMMVSTADDLSGNPCYISILNII 325 (448)
T ss_pred hCcchhhhhccccccCCcchHhHHhhh
Confidence 999888777766 55666665554433
No 34
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=59.51 E-value=55 Score=22.47 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=41.9
Q ss_pred CCCHHHHHHHHHHhCCEeeEeeccceEEEEEEecCCCHHHHHHHHHHhh
Q psy14217 120 YVNKDAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVV 168 (529)
Q Consensus 120 ~~~~~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l 168 (529)
|+....+..+++.+++.+.-....+...+.+.++.+..+.+.+.+.+..
T Consensus 5 Y~~~~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 5 YSQYGKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp CCCHHHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 5566789999999999987666777799999999999999999998764
No 35
>KOG2583|consensus
Probab=40.50 E-value=4.2e+02 Score=27.04 Aligned_cols=175 Identities=10% Similarity=0.119 Sum_probs=95.4
Q ss_pred ceeEEEEeccCCCCCC-C-chHHHHHHHhhcCCCCCCCCCCCCCcccHHHHHHhhhcCceeEEEEeccccCCcccEEEEE
Q psy14217 319 LSHVVIGLEGVSHQDP-D-FVPACVLNILMGGGGSFSAGGPGKGMYTRLYTNVLNRHHWMFSATAYNHAYADTGLFCIHA 396 (529)
Q Consensus 319 ~~~v~i~~~~~~~~~~-~-~~~~~vl~~lL~~~~~f~~~~~g~g~~srL~~~lR~~~gl~Y~~~a~~~~~~~~g~f~i~~ 396 (529)
-+.+.+.|..-+.-.+ + .-...+|+..-+.... .- + =++-+|+-+.+.=...+ ..+.-.|++.+
T Consensus 43 is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq---~~------s-al~ivr~se~~GG~Lss----~~tRe~~~~tv 108 (429)
T KOG2583|consen 43 ISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQ---ER------S-ALKIVRESEQLGGTLSS----TATRELIGLTV 108 (429)
T ss_pred ceEEEEEEecCccCCccccccHHHHHHHhcccCcc---cc------c-hhhhhhhhHhhCceeee----eeecceEEEEE
Confidence 4788899986554333 3 2344555544442110 00 1 12234554332222222 23345778888
Q ss_pred EeCCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHhcCChHHH-HHHHHHHHHhcCCCCChhHHHHHHccC
Q psy14217 397 SAPPSNVKNIVDVLVKELVTMAGPIDADELSRAK-KQLQSMLLMNLEARPAV-FEDVGRQVLATGHRKRPSTYIESIENV 474 (529)
Q Consensus 397 ~~~p~~~~~~~~~i~~~l~~l~~~it~~el~~ak-~~l~~~~~~~~~~~~~~-~~~l~~~~l~~~~~~~~~~~~~~i~~v 474 (529)
.+..+.++-.+..+.+.+.. ..|.+.||+... ..+..++. .+++... ++.+-.-..+.+.-.+..-..-.+.++
T Consensus 109 t~lrd~~~~~l~~L~~V~~~--paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRngLgnslY~p~~~vg~v 184 (429)
T KOG2583|consen 109 TFLRDDLEYYLSLLGDVLDA--PAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRNGLGNSLYSPGYQVGSV 184 (429)
T ss_pred EEecccHHHHHHHHHHhhcc--cCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhcccCCcccCCcccccCc
Confidence 88777776665555444321 148888888877 55555543 3344433 344443333333222222222369999
Q ss_pred CHHHHHHHHHHhccC-CCeEEEEcCCCCCCCHHHHHHHhh
Q psy14217 475 TEDDIRRVASRLLTS-QPSVAARGELINFPSYEDIHSGIQ 513 (529)
Q Consensus 475 T~edv~~~a~~~l~~-~~~~~v~G~~~~ip~~~~~~~~~~ 513 (529)
+.+||..++++.+.. +..++-+|. .-+++..+...+.
T Consensus 185 ss~eL~~Fa~k~fv~gn~~lvg~nv--d~~~L~~~~~~~~ 222 (429)
T KOG2583|consen 185 SSSELKDFAAKHFVKGNAVLVGVNV--DHDDLKQFADEYA 222 (429)
T ss_pred cHHHHHHHHHHHhhccceEEEecCC--ChHHHHHHHHHhc
Confidence 999999999999874 566555543 4566666666663
No 36
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]
Probab=34.84 E-value=2.8e+02 Score=28.50 Aligned_cols=128 Identities=15% Similarity=0.204 Sum_probs=73.4
Q ss_pred EEEEEeCCCCHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCh---hHHH
Q psy14217 393 CIHASAPPSNVKNIVDVLVKELVTMAG-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRP---STYI 468 (529)
Q Consensus 393 ~i~~~~~p~~~~~~~~~i~~~l~~l~~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---~~~~ 468 (529)
++.+...|-..+..++.+.+-.+. +. .++++-++-.-+.+-.+ ..+.......+.......+...+. .+..
T Consensus 236 Gl~~~I~~Pd~e~r~aiL~kka~~-~~~~i~~ev~~~la~~~~~n----vReLegaL~~l~~~a~~~~~~iTi~~v~e~L 310 (408)
T COG0593 236 GLVVEIEPPDDETRLAILRKKAED-RGIEIPDEVLEFLAKRLDRN----VRELEGALNRLDAFALFTKRAITIDLVKEIL 310 (408)
T ss_pred eeEEeeCCCCHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHhhcc----HHHHHHHHHHHHHHHHhcCccCcHHHHHHHH
Confidence 445555555566666666653332 32 47777665554444433 333333444554444444432222 1111
Q ss_pred -HHH----ccCCHHHHHHHHHHhccCC-CeEEEEcCCCCCCCHHHHHHHhh---cCCCCCcceeecc
Q psy14217 469 -ESI----ENVTEDDIRRVASRLLTSQ-PSVAARGELINFPSYEDIHSGIQ---NNGVLPRKGRISS 526 (529)
Q Consensus 469 -~~i----~~vT~edv~~~a~~~l~~~-~~~~v~G~~~~ip~~~~~~~~~~---~~~~~~~~~~~~~ 526 (529)
+.+ . +|+++|++.+.+|++=+ .-+..-.-...+..+.+|.-+|+ .+--+|+=++.|+
T Consensus 311 ~~~~~~~~~-itie~I~~~Va~~y~v~~~dl~s~~R~~~i~~~RqiamyL~r~lt~~Slp~IG~~Fg 376 (408)
T COG0593 311 KDLLRAGEK-ITIEDIQKIVAEYYNVKVSDLLSKSRTRNIVRPRQIAMYLARELTNLSLPEIGKAFG 376 (408)
T ss_pred HHhhccccc-CCHHHHHHHHHHHhCCCHHHhhccccccccchHHHHHHHHHHHHccCcHHHHHHHhC
Confidence 111 3 99999999999998732 33333344567889999999998 5555776666664
No 37
>COG3735 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.93 E-value=6.6e+02 Score=24.55 Aligned_cols=107 Identities=14% Similarity=0.068 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCChhHH-----------HHHHcc
Q psy14217 405 NIVDVLVKELVTMAGPIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRKRPSTY-----------IESIEN 473 (529)
Q Consensus 405 ~~~~~i~~~l~~l~~~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----------~~~i~~ 473 (529)
..++.+...++.+.....+..++-.+..+. -.++....++.+...++.+ +....... .+..+.
T Consensus 174 ~gLEt~~~Ql~~l~~LP~d~~i~~L~~tl~-----~~~~~~d~l~tmi~~~l~g-D~~~~~~~~~~~~~~~~~~~~~~~~ 247 (299)
T COG3735 174 LGLETAEEQLAALASLPLDFGIELLIDTLA-----LGDTNADLLETMIDLWLNG-DVGMFMPNLQAILPNKTFYADLYDV 247 (299)
T ss_pred cchhhHHHHHHHHHcCChHHHHHHHHHHHH-----ccccHHHHHHHHHHHHHcC-CcchhhHHHhhhCccccchHHHHHH
Confidence 334555566666655333444444433322 4456666677777666633 22211111 111111
Q ss_pred CCHHHHHHHHH---HhccCCCeEEEEcCCCCCCCHHHHHHHhhcCCCC
Q psy14217 474 VTEDDIRRVAS---RLLTSQPSVAARGELINFPSYEDIHSGIQNNGVL 518 (529)
Q Consensus 474 vT~edv~~~a~---~~l~~~~~~~v~G~~~~ip~~~~~~~~~~~~~~~ 518 (529)
+=.+-=...+. ..+.+...+++||.. .+|-.+.+-+.|+++|+.
T Consensus 248 li~~RN~~wad~~~~~l~~G~~fvaVGAl-HL~G~e~L~e~Lrk~g~t 294 (299)
T COG3735 248 LITQRNRAWADKKTPLLQGGRYFVAVGAL-HLPGPEGLVELLRKDGFT 294 (299)
T ss_pred HHHHHHHHHHHhhccccCCCCEEEEeccc-cccCcccHHHHHHHcCCe
Confidence 11111122233 233457889999975 799999999999999973
No 38
>cd08779 Death_PIDD Death Domain of p53-induced protein with a death domain. Death domain (DD) found in PIDD (p53-induced protein with a death domain) and similar proteins. PIDD is a component of the PIDDosome complex, which is an oligomeric caspase-activating complex involved in caspase-2 activation and plays a role in mediating stress-induced apoptosis. The PIDDosome complex is composed of three components, PIDD, RAIDD and caspase-2, which interact through their DDs and DD-like domains. The DD of PIDD interacts with the DD of RAIDD, which also contains a Caspase Activation and Recruitment Domain (CARD) that interacts with the caspase-2 CARD. Autoproteolysis of PIDD determines the downstream signaling event, between pro-survival NF-kB or pro-death caspase-2 activation. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members
Probab=24.79 E-value=3.1e+02 Score=21.12 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-c-CCCCChhHHHHHHccCCHH
Q psy14217 402 NVKNIVDVLVKELVTMAG--PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLA-T-GHRKRPSTYIESIENVTED 477 (529)
Q Consensus 402 ~~~~~~~~i~~~l~~l~~--~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~-~-~~~~~~~~~~~~i~~vT~e 477 (529)
++..+-..+-..+..+.. |+++.++++++...-. +.......+...+.. . +.......+..++..+...
T Consensus 4 ~l~~ia~~LG~~Wk~lar~LGlse~~Id~Ie~~~~~-------dl~eq~~~mL~~W~~~~~~~~atv~~L~~AL~~~gr~ 76 (86)
T cd08779 4 NLLSIAGRLGLDWQAIGLHLGLSYRELQRIKYNNRD-------DLDEQIFDMLFSWAQRQAGDPDAVGKLVTALEESGRQ 76 (86)
T ss_pred HHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHCcc-------CHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHcCHH
Confidence 455566667777777753 8999999999865422 222222222222222 2 2234456788999999999
Q ss_pred HHHHHHHHh
Q psy14217 478 DIRRVASRL 486 (529)
Q Consensus 478 dv~~~a~~~ 486 (529)
|+.+-.+..
T Consensus 77 dlae~l~~~ 85 (86)
T cd08779 77 DLADEVRAV 85 (86)
T ss_pred HHHHHHHhh
Confidence 998877654
No 39
>cd04914 ACT_AKi-DapG-BS_1 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the N-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria, bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and
Probab=22.96 E-value=2.3e+02 Score=20.48 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCEeeEeeccceEEEEEEecCCCHHHHHHHHHHhhcCCCC
Q psy14217 124 DAIAQSLEKIGGICDCLSSRDTFIYAASAATSGLDTVMKILGDVVLRPKF 173 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t~~~~~~~~~~~~~~~l~~~l~ll~~~l~~p~f 173 (529)
.++...|...|.++..-.-. ...+++.+...+++.+.+++.++=.+|.+
T Consensus 17 a~if~~La~~~InvDmI~~~-~~~isFtv~~~d~~~~~~il~~~~~~~~~ 65 (67)
T cd04914 17 QRVFKALANAGISVDLINVS-PEEVIFTVDGEVAEKAVDILEKMGLDPSV 65 (67)
T ss_pred HHHHHHHHHcCCcEEEEEec-CCCEEEEEchhhHHHHHHHHHHcCCceEe
Confidence 35677777777776666322 12588999999999998887776666544
No 40
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=22.64 E-value=2.2e+02 Score=19.87 Aligned_cols=46 Identities=7% Similarity=0.051 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCEeeEee-ccceEEEEEEecCCCHHHHHHHHHHhhc
Q psy14217 124 DAIAQSLEKIGGICDCLS-SRDTFIYAASAATSGLDTVMKILGDVVL 169 (529)
Q Consensus 124 ~~l~~~l~~~g~~~~~~t-~~~~~~~~~~~~~~~l~~~l~ll~~~l~ 169 (529)
.++.+.|.+.|..+.... +.....+++.+..++.+.+++.+.+.+.
T Consensus 19 ~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~~ 65 (66)
T cd04922 19 ATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERFF 65 (66)
T ss_pred HHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHh
Confidence 356666777777764442 2245889999999999999999888764
No 41
>COG5023 Tubulin [Cytoskeleton]
Probab=22.58 E-value=59 Score=32.49 Aligned_cols=139 Identities=13% Similarity=0.107 Sum_probs=70.9
Q ss_pred CCCCCCCcccHHHHHHhhhcC----ceeEEEEecccc-----CCcccEEEEEEe-CCC-----CHHHHHHHHHHHHHHhc
Q psy14217 354 AGGPGKGMYTRLYTNVLNRHH----WMFSATAYNHAY-----ADTGLFCIHASA-PPS-----NVKNIVDVLVKELVTMA 418 (529)
Q Consensus 354 ~~~~g~g~~srL~~~lR~~~g----l~Y~~~a~~~~~-----~~~g~f~i~~~~-~p~-----~~~~~~~~i~~~l~~l~ 418 (529)
+||.|.||.+-|..+||++++ +.|+|+-..... +...++++..-. ..+ .=+.+.+... +.++
T Consensus 140 gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~Sd~VVePYNsvLt~h~l~ensD~tf~~DNeal~di~~---~~L~ 216 (443)
T COG5023 140 GGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSDVVVEPYNSVLTLHRLLENSDCTFVVDNEALYDICR---RNLR 216 (443)
T ss_pred cCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccCcceecccHHHHHHHHHHhcCCceEEechHHHHHHHH---HhcC
Confidence 377899999999999999754 567665421100 001111111000 000 1112222222 2233
Q ss_pred C-CCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCC-----------ChhHHHHHHccCCHHHHHHHHHHh
Q psy14217 419 G-PIDADELSRAKKQLQSMLLMNLEARPAVFEDVGRQVLATGHRK-----------RPSTYIESIENVTEDDIRRVASRL 486 (529)
Q Consensus 419 ~-~it~~el~~ak~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~~~~i~~vT~edv~~~a~~~ 486 (529)
- ..+=+.+++...++.+.....+.=+.++-.++.......-.+. .....-+..++.|..| +.+++
T Consensus 217 i~~P~y~~lN~LIs~VmSsvTtslRfpG~ln~dl~~~~~nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~e---vt~~~ 293 (443)
T COG5023 217 IQNPSYDDLNQLISTVMSSVTTSLRFPGYLNVDLRSIQTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSE---VTNQL 293 (443)
T ss_pred CCCCChHHHHHHHHHHHHhhhheeecCccccchHHHHHhcCCCCCcccccccccCcccchhhHHHhcccHHH---HHHHH
Confidence 3 3777889988888888877777666665444433221111100 0012234555555444 45677
Q ss_pred ccCCCeEEEEcC
Q psy14217 487 LTSQPSVAARGE 498 (529)
Q Consensus 487 l~~~~~~~v~G~ 498 (529)
|.+++.++.+-+
T Consensus 294 f~p~N~mv~~dp 305 (443)
T COG5023 294 FDPKNQMVSCDP 305 (443)
T ss_pred hCcccceeeecC
Confidence 777666666544
No 42
>cd04916 ACT_AKiii-YclM-BS_2 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. B. subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from B. subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.44 E-value=2.5e+02 Score=19.60 Aligned_cols=46 Identities=11% Similarity=0.111 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCEeeEee-ccceEEEEEEecCCCHHHHHHHHHHhhcC
Q psy14217 125 AIAQSLEKIGGICDCLS-SRDTFIYAASAATSGLDTVMKILGDVVLR 170 (529)
Q Consensus 125 ~l~~~l~~~g~~~~~~t-~~~~~~~~~~~~~~~l~~~l~ll~~~l~~ 170 (529)
.+...|...|..+..-. +.....+++.++.++...++..+.+.+.+
T Consensus 20 ~i~~~L~~~~i~v~~i~~~~s~~~isf~v~~~d~~~~~~~lh~~~~~ 66 (66)
T cd04916 20 RATAALAKAGINIRMINQGSSEISIMIGVHNEDADKAVKAIYEEFFN 66 (66)
T ss_pred HHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHhC
Confidence 45666666677655443 22447888999999999999998887653
Done!