Query psy14218
Match_columns 99
No_of_seqs 102 out of 1058
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 22:26:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 6.2E-37 2.1E-41 237.1 0.1 95 1-95 20-114 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 1.2E-36 4E-41 235.8 0.9 95 1-95 20-116 (451)
3 2btq_B Tubulin btubb; structur 99.9 7.8E-30 2.7E-34 196.4 0.2 95 1-95 20-115 (426)
4 2bto_A Tubulin btuba; bacteria 99.9 5.7E-29 2E-33 193.7 -0.1 93 1-95 22-118 (473)
5 3cb2_A Gamma-1-tubulin, tubuli 99.9 1.2E-28 4E-33 192.1 -0.4 93 1-94 21-115 (475)
6 3m89_A FTSZ/tubulin-related pr 97.8 6.1E-06 2.1E-10 63.6 1.4 49 37-90 68-117 (427)
7 2r75_1 Cell division protein F 93.9 0.0089 3E-07 44.6 -0.3 37 42-86 34-75 (338)
8 1ofu_A FTSZ, cell division pro 90.7 0.07 2.4E-06 39.4 1.0 37 42-86 38-79 (320)
9 2vaw_A FTSZ, cell division pro 89.5 0.14 4.7E-06 39.0 1.8 37 42-86 38-79 (394)
10 1w5f_A Cell division protein F 89.3 0.073 2.5E-06 39.9 0.1 48 28-86 37-89 (353)
11 1rq2_A Cell division protein F 87.2 0.094 3.2E-06 39.7 -0.5 37 42-86 38-79 (382)
12 2vxy_A FTSZ, cell division pro 86.4 0.097 3.3E-06 39.7 -0.8 37 42-86 38-79 (382)
13 2vap_A FTSZ, cell division pro 85.7 0.14 4.9E-06 38.5 -0.2 35 43-85 65-104 (364)
14 4dxr_B Nesprin-1; beta-sandwic 44.2 6.6 0.00022 19.7 0.5 12 77-88 13-24 (35)
15 3v3t_A Cell division GTPase FT 41.2 3.8 0.00013 30.8 -0.9 39 42-86 30-68 (360)
16 4dxd_A Cell division protein F 33.2 7.2 0.00025 29.7 -0.5 37 42-86 44-85 (396)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=6.2e-37 Score=237.06 Aligned_cols=95 Identities=89% Similarity=1.489 Sum_probs=91.7
Q ss_pred CHHHHHhHhCCCCCCCccCCCchhhccccceeeecCCCceeceEEEecCCCCcccccccCCCCccccCCceeeccCCCCc
Q psy14218 1 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQSGAGN 80 (99)
Q Consensus 1 fWe~~~~EH~i~~~g~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~gagn 80 (99)
|||+||+||||+++|++.++++.+++++++||+|+..|+|+||||||||||+||++|++++++.||+|+++|++|+||||
T Consensus 20 ~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~~~~lf~p~~~i~g~~gAgN 99 (445)
T 3ryc_B 20 FWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGN 99 (445)
T ss_dssp HHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTSTTGGGSCGGGEEECSSCCTT
T ss_pred HHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhcccccceecccceEEccccccC
Confidence 79999999999999999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCC
Q psy14218 81 NWAKGHYTEPIPLPV 95 (99)
Q Consensus 81 NwA~Gyy~~g~~~~~ 95 (99)
|||+|||+.|+++.|
T Consensus 100 N~A~G~yt~G~e~~d 114 (445)
T 3ryc_B 100 NWAKGHYTEGAELVD 114 (445)
T ss_dssp CHHHHHHSHHHHHHH
T ss_pred CccccchhhhHHHHH
Confidence 999999999998764
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=1.2e-36 Score=235.82 Aligned_cols=95 Identities=39% Similarity=0.766 Sum_probs=86.8
Q ss_pred CHHHHHhHhCCCCCCCccCCCch--hhccccceeeecCCCceeceEEEecCCCCcccccccCCCCccccCCceeeccCCC
Q psy14218 1 FWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQSGA 78 (99)
Q Consensus 1 fWe~~~~EH~i~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~ga 78 (99)
|||+||+||||++||++.++++. +++++++||+|+..|+|+||||||||||+||++|+++++++||+|+++|++|+||
T Consensus 20 ~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~g~~~~lf~p~~~i~gk~gA 99 (451)
T 3ryc_A 20 CWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDA 99 (451)
T ss_dssp HHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHHSTTTTTSCGGGEEECSSCC
T ss_pred HHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeeecccccccCHHHeeeccccc
Confidence 79999999999999999877654 4789999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCC
Q psy14218 79 GNNWAKGHYTEPIPLPV 95 (99)
Q Consensus 79 gnNwA~Gyy~~g~~~~~ 95 (99)
|||||+|||+.|+++.|
T Consensus 100 gNNwA~G~yt~G~e~~d 116 (451)
T 3ryc_A 100 ANNYARGHYTIGKEIID 116 (451)
T ss_dssp TTCHHHHHHTSHHHHHH
T ss_pred cCCCCeeecccchHhHH
Confidence 99999999999998764
No 3
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=99.95 E-value=7.8e-30 Score=196.45 Aligned_cols=95 Identities=35% Similarity=0.670 Sum_probs=73.3
Q ss_pred CHHHHHhHhCCCCCCCccCCC-chhhccccceeeecCCCceeceEEEecCCCCcccccccCCCCccccCCceeeccCCCC
Q psy14218 1 FWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQSGAG 79 (99)
Q Consensus 1 fWe~~~~EH~i~~~g~~~~~~-~~~~~~~~~fF~e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~gag 79 (99)
||+++|+||||+++|.+.+++ +.+++++++||+|+..++|+||||+|||||++|+.++.++++.+|+|+++++|++|||
T Consensus 20 fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~~~~~lf~p~~i~~g~~gAg 99 (426)
T 2btq_B 20 FWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGGDMSQLFDESSIVRKIPGAA 99 (426)
T ss_dssp HHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC------------CCCCTTSEEECCSCCT
T ss_pred HHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCccccccccccccccccCcccccccccCcc
Confidence 799999999999999988766 5667899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCC
Q psy14218 80 NNWAKGHYTEPIPLPV 95 (99)
Q Consensus 80 nNwA~Gyy~~g~~~~~ 95 (99)
||||+|||+.|+++.+
T Consensus 100 nn~a~G~~~~G~~~~e 115 (426)
T 2btq_B 100 NNWARGYNVEGEKVID 115 (426)
T ss_dssp TCHHHHHTHHHHHHHH
T ss_pred CcccccccchhHHHHH
Confidence 9999999999987653
No 4
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=99.94 E-value=5.7e-29 Score=193.74 Aligned_cols=93 Identities=37% Similarity=0.663 Sum_probs=85.0
Q ss_pred CHHHHHhHhCCCCC-CCccCCCchhhccccceee---ecCCCceeceEEEecCCCCcccccccCCCCccccCCceeeccC
Q psy14218 1 FWEIISDEHGIDPT-GAYHGDSDLQLERINVYYN---EASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQS 76 (99)
Q Consensus 1 fWe~~~~EH~i~~~-g~~~~~~~~~~~~~~~fF~---e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~ 76 (99)
||+++|+||||+++ |++.++++. ++++++||+ |+..++|+||||+|||||++|+.++.++ +.+|.|+++++++.
T Consensus 22 ~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i~~~~-~~lf~p~~~it~~~ 99 (473)
T 2bto_A 22 FWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATS-GSLFNPANLISRTE 99 (473)
T ss_dssp HHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHHHHS-TTCSCGGGEEECSS
T ss_pred HHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhhhccc-cccccccceEeccc
Confidence 79999999999999 998876665 788999999 9999999999999999999999999988 99999999999999
Q ss_pred CCCcccccccCCCCCCCCC
Q psy14218 77 GAGNNWAKGHYTEPIPLPV 95 (99)
Q Consensus 77 gagnNwA~Gyy~~g~~~~~ 95 (99)
|||||||+|||+.|+++.|
T Consensus 100 GAgnn~a~G~~~~G~~~~e 118 (473)
T 2bto_A 100 GAGGNFAVGYLGAGREVLP 118 (473)
T ss_dssp CCTTCHHHHHTSHHHHHHH
T ss_pred CCCCCcCCCcchhhHHHHH
Confidence 9999999999999987653
No 5
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=99.94 E-value=1.2e-28 Score=192.11 Aligned_cols=93 Identities=32% Similarity=0.763 Sum_probs=84.8
Q ss_pred CHHHHHhHhCCCCCCCccCCCchhhccccceeeecCCCceeceEEEecCCCCcccccccCCCCccccCCceeeccC--CC
Q psy14218 1 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQS--GA 78 (99)
Q Consensus 1 fWe~~~~EH~i~~~g~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~--ga 78 (99)
||+++|.||||+++|.+.+....+++++++||+|+..++|+||||||||||++|++|++++++.||+|++++++++ ||
T Consensus 21 fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~~~~lf~p~~~i~g~~g~gA 100 (475)
T 3cb2_A 21 FWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGA 100 (475)
T ss_dssp HHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHSTTTTTSCGGGEEECCTTCCC
T ss_pred HHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeeccccccccCCccceeecccccCC
Confidence 7999999999999999876655567889999999999999999999999999999999999999999999999997 79
Q ss_pred CcccccccCCCCCCCC
Q psy14218 79 GNNWAKGHYTEPIPLP 94 (99)
Q Consensus 79 gnNwA~Gyy~~g~~~~ 94 (99)
|||||+|| +.|+++.
T Consensus 101 gnn~a~G~-~~g~e~~ 115 (475)
T 3cb2_A 101 GNNWASGF-SQGEKIH 115 (475)
T ss_dssp TTCHHHHH-HHHHHHH
T ss_pred CCCchhhh-hhhHhhH
Confidence 99999995 6676543
No 6
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=97.77 E-value=6.1e-06 Score=63.60 Aligned_cols=49 Identities=12% Similarity=-0.014 Sum_probs=30.1
Q ss_pred CCceeceEEEecCCCCcccccccCCCCccccCCce-eeccCCCCcccccccCCCC
Q psy14218 37 GSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNF-VFGQSGAGNNWAKGHYTEP 90 (99)
Q Consensus 37 ~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~-i~~~~gagnNwA~Gyy~~g 90 (99)
.+++.+|+|+||+|+.+++.++..+. ++.+ +.++.||||||++||+..|
T Consensus 68 ~g~~~~~~iavNtd~~dl~~L~~~~~-----~~~i~l~G~~GAG~np~~G~~~ag 117 (427)
T 3m89_A 68 NGTTCYPTLAVNFAESDMMHLQNIIK-----EDRIHFDGLKGAARTPSVVTDLFD 117 (427)
T ss_dssp TSCBSCCEEEEESSGGGGTTCSSSCG-----GGEEEC-----------CHHHHHS
T ss_pred cCCcCceEEEEECCHHHHHHHhcCCC-----cceEEecCCCCCCCCHHHHHHHhh
Confidence 46789999999999999998877663 3343 5688999999999998764
No 7
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=93.94 E-value=0.0089 Score=44.56 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=28.9
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~Gy 86 (99)
++.|.+|+|+.+++.+.. ++.+..|+ .||||||+.|+
T Consensus 34 v~~ia~NTD~q~L~~~~a--------~~ki~iG~~~t~g~GAGnn~a~G~ 75 (338)
T 2r75_1 34 VELYAINTDVQHLSTLKV--------PNKIQIGEKVTRGLGAGAKPEVGE 75 (338)
T ss_dssp CEEEEEESBHHHHHTCCC--------SEEEECCHHHHTTBCCTTCHHHHH
T ss_pred ceEEEEECCHHHHhcCCC--------CcEEEecCcccCCCCCCCChHHHH
Confidence 799999999999877543 34455554 89999999884
No 8
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=90.70 E-value=0.07 Score=39.38 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=28.4
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeec-----cCCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFG-----QSGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~-----~~gagnNwA~Gy 86 (99)
.+.+.+|+|.+.++.+.. ++.+..| ..||||||+.|+
T Consensus 38 v~~i~~ntD~q~L~~~~a--------~~~i~iG~~~t~g~GAG~n~~~G~ 79 (320)
T 1ofu_A 38 VEFICANTDAQALKNIAA--------RTVLQLGPGVTKGLGAGANPEVGR 79 (320)
T ss_dssp EEEEEEESBTGGGSSCSC--------SEEEECCHHHHTTBCCCSCHHHHH
T ss_pred CCEEEEcCCHHHHhcCCC--------CcEEEccCCccCCCCCCCCHHHHH
Confidence 589999999998877653 3445555 359999999985
No 9
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=89.52 E-value=0.14 Score=38.99 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=28.4
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~Gy 86 (99)
.+.|.+++|.+.++.+.. ++.+..|+ .||||||+.|+
T Consensus 38 v~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~G~GAG~n~~~G~ 79 (394)
T 2vaw_A 38 VEFICANTDAQALKNIAA--------RTVLQLGPGVTKGLGAGANPEVGR 79 (394)
T ss_dssp EEEEEEESCTTTTSSCSS--------SCEEECCHHHHSSSCCCSCHHHHH
T ss_pred CCEEEecCCHHHHhcCCC--------CcEEEccccccCCCCCCCCHHHHH
Confidence 589999999998876543 44555553 69999999985
No 10
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=89.31 E-value=0.073 Score=39.88 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=32.3
Q ss_pred ccceeeecCCCceeceEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCccccccc
Q psy14218 28 INVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKGH 86 (99)
Q Consensus 28 ~~~fF~e~~~~~~~pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~Gy 86 (99)
++.+......| .+.+.+++|...++.+.. ++.+..|+ .||||||+.|+
T Consensus 37 vn~m~~~gi~g---v~~ia~nTD~q~L~~~~a--------~~~i~iG~~~t~G~GAG~n~~~G~ 89 (353)
T 1w5f_A 37 INRMIEIGIHG---VEFVAVNTDLQVLEASNA--------DVKIQIGENITRGLGAGGRPEIGE 89 (353)
T ss_dssp HHHHHHHCCTT---EEEEEEESCHHHHHTCCC--------SEEEECCTTTTTTSCCTTCHHHHH
T ss_pred HHHHHHhCCCC---CCEEEEcCCHHHHhcCCC--------CcEEEccCcccCCCCCCCChHHHH
Confidence 34444433333 589999999988876543 34455554 59999999985
No 11
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=87.23 E-value=0.094 Score=39.74 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=25.1
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~Gy 86 (99)
.+.|.+|+|...++.+.. ++.+..|+ .||||||+.|+
T Consensus 38 v~fia~NTD~q~L~~~~a--------~~~i~iG~~~t~G~GAG~n~~~G~ 79 (382)
T 1rq2_A 38 VEFIAINTDAQALLMSDA--------DVKLDVGRDSTRGLGAGADPEVGR 79 (382)
T ss_dssp EEEEEEESCHHHHHHCCC--------SEEEECCTTTC-----CCCHHHHH
T ss_pred CCEEEecCCHHHHhcCCC--------CcEEEecccccCCCCCCCChHHHH
Confidence 589999999988876542 33444543 59999999985
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=86.37 E-value=0.097 Score=39.68 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=27.8
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeec-----cCCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFG-----QSGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~-----~~gagnNwA~Gy 86 (99)
.+.|.+|+|..+++.+.. ++.+..| ..||||||+.|+
T Consensus 38 v~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~G~GAGnn~a~G~ 79 (382)
T 2vxy_A 38 VEYIAVNTDAQALNLSKA--------EVKMQIGAKLTRGLGAGANPEVGK 79 (382)
T ss_dssp CEEEEEESBHHHHHTCCC--------SEEEECCHHHHTTBCCTTCHHHHH
T ss_pred CCEEEEeCCHHHHhcCCC--------CcEEEecccccCCCCCCCChHHHH
Confidence 689999999988877653 2344444 459999999885
No 13
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=85.74 E-value=0.14 Score=38.49 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=25.8
Q ss_pred eEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCcccccc
Q psy14218 43 RAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKG 85 (99)
Q Consensus 43 Rav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~G 85 (99)
..+.+++|.+.++.+.. ++.+..|+ .||||||++|
T Consensus 65 ~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~G~GAGnn~a~G 104 (364)
T 2vap_A 65 KTVAINTDAQQLIRTKA--------DKKILIGKKLTRGLGAGGNPKIG 104 (364)
T ss_dssp EEEEEESBHHHHHTSCC--------SEEEECCTTTTTTBCCTTCHHHH
T ss_pred CEEEEcCcHHHHhcCCC--------CcEEEeccccccCCCCCCChHHH
Confidence 67889998888776543 33445543 5999999999
No 14
>4dxr_B Nesprin-1; beta-sandwich, LINC complex, structural protein; HET: DMU; 2.32A {Homo sapiens} PDB: 4dxs_B*
Probab=44.15 E-value=6.6 Score=19.70 Aligned_cols=12 Identities=25% Similarity=0.396 Sum_probs=9.1
Q ss_pred CCCcccccccCC
Q psy14218 77 GAGNNWAKGHYT 88 (99)
Q Consensus 77 gagnNwA~Gyy~ 88 (99)
--.|||||.++-
T Consensus 13 ~~aNNFARSF~p 24 (35)
T 4dxr_B 13 ALSNNFARSFHP 24 (35)
T ss_dssp TTCCTGGGSSSC
T ss_pred HhhhhHHHHhHH
Confidence 346999999864
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=41.22 E-value=3.8 Score=30.80 Aligned_cols=39 Identities=13% Similarity=0.237 Sum_probs=21.2
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeeccCCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~~gagnNwA~Gy 86 (99)
-.+|.++++...+..+.... ...++....|||+||+.|+
T Consensus 30 v~~iaiNTD~q~L~~~~~~~------~ki~ig~GlGAG~np~vG~ 68 (360)
T 3v3t_A 30 YNALFINTSKKDLDSLKHAK------HTYHIPYAEGCGKERKKAV 68 (360)
T ss_dssp SEECEEESCHHHHHTCSSCS------CEEECC------CCHHHHH
T ss_pred ceEEEEECCHHHHhhCCCCc------cEEEcCCCCCCCCCHHHHH
Confidence 37788999988776654311 1112334579999999996
No 16
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=33.25 E-value=7.2 Score=29.68 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=25.3
Q ss_pred ceEEEecCCCCcccccccCCCCccccCCceeecc-----CCCCccccccc
Q psy14218 42 PRAILVDLEPGTMDAVRSGPFGQIFRPDNFVFGQ-----SGAGNNWAKGH 86 (99)
Q Consensus 42 pRav~iD~ep~~i~~i~~~~~~~lf~~~~~i~~~-----~gagnNwA~Gy 86 (99)
...|.+++|...+..... +..+..|+ .||||||+.|+
T Consensus 44 vefiaiNTD~qaL~~s~a--------~~ki~lG~~~t~GlGAG~np~vG~ 85 (396)
T 4dxd_A 44 VEFIAINTDGQALNLSKA--------ESKIQIGEKLTRGLGAGANPEIGK 85 (396)
T ss_dssp EEEEEEESCHHHHHTCCC--------SEEEECCHHHHTTSCCTTCHHHHH
T ss_pred ceEEEEECCHHHHhcCCC--------ccEEEcCccccCCCCCCCChHHHH
Confidence 456889988877755432 22344553 59999999986
Done!