Query psy14221
Match_columns 546
No_of_seqs 441 out of 3224
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 22:30:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14221.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14221hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0994|consensus 100.0 8E-48 1.7E-52 409.2 23.3 353 130-493 764-1171(1758)
2 KOG0994|consensus 100.0 9.6E-41 2.1E-45 355.5 17.3 344 6-441 778-1165(1758)
3 KOG1836|consensus 100.0 2.1E-37 4.6E-42 357.7 29.1 458 7-477 460-1031(1705)
4 KOG1836|consensus 100.0 3E-29 6.5E-34 290.4 27.9 445 10-493 300-998 (1705)
5 KOG4289|consensus 99.8 2.9E-19 6.3E-24 195.1 15.3 96 171-284 1220-1316(2531)
6 KOG4289|consensus 99.8 1.2E-18 2.5E-23 190.5 15.3 128 290-436 1720-1852(2531)
7 KOG1225|consensus 99.3 1.8E-11 3.9E-16 128.6 14.2 201 146-419 159-365 (525)
8 KOG1225|consensus 99.3 5.1E-11 1.1E-15 125.2 15.6 133 269-465 233-365 (525)
9 KOG1219|consensus 99.2 2.5E-11 5.4E-16 138.7 9.7 112 337-468 3865-3978(4289)
10 KOG3512|consensus 99.2 4E-11 8.6E-16 120.3 9.8 165 309-476 293-490 (592)
11 KOG3512|consensus 99.2 9.1E-11 2E-15 117.7 10.2 174 220-427 295-487 (592)
12 KOG1219|consensus 99.1 4.2E-11 9.2E-16 136.9 6.7 112 248-373 3865-3977(4289)
13 KOG1217|consensus 99.1 2.8E-09 6.1E-14 114.6 18.1 239 146-418 108-389 (487)
14 KOG1217|consensus 98.9 3E-08 6.5E-13 106.6 16.8 234 171-467 108-353 (487)
15 KOG1226|consensus 98.6 3.6E-07 7.9E-12 98.1 11.1 134 309-472 476-625 (783)
16 KOG1226|consensus 98.5 4.2E-07 9.2E-12 97.6 10.0 122 270-425 478-624 (783)
17 KOG4260|consensus 98.4 2.5E-07 5.5E-12 87.2 5.5 158 274-462 132-304 (350)
18 KOG1214|consensus 98.4 6.6E-06 1.4E-10 88.4 15.7 134 225-370 708-859 (1289)
19 KOG4260|consensus 98.1 6E-06 1.3E-10 78.1 6.4 162 178-368 132-304 (350)
20 KOG1214|consensus 98.0 4.5E-05 9.8E-10 82.2 11.2 131 269-418 715-859 (1289)
21 KOG1218|consensus 97.9 0.0017 3.6E-08 66.1 21.9 269 143-468 10-297 (316)
22 cd00055 EGF_Lam Laminin-type e 97.7 7.3E-05 1.6E-09 53.8 4.9 42 342-383 2-43 (50)
23 smart00180 EGF_Lam Laminin-typ 97.7 7.3E-05 1.6E-09 52.7 4.7 38 344-381 3-40 (46)
24 cd00055 EGF_Lam Laminin-type e 97.6 9.4E-05 2E-09 53.2 4.9 42 390-431 2-43 (50)
25 smart00180 EGF_Lam Laminin-typ 97.6 0.00011 2.4E-09 51.8 4.8 39 391-429 2-40 (46)
26 KOG1218|consensus 97.6 0.0036 7.8E-08 63.6 17.8 161 267-463 46-209 (316)
27 PF00053 Laminin_EGF: Laminin 97.5 4E-05 8.7E-10 54.9 1.7 41 391-431 2-42 (49)
28 PF00053 Laminin_EGF: Laminin 97.4 5.4E-05 1.2E-09 54.3 0.6 41 343-383 2-42 (49)
29 PF00008 EGF: EGF-like domain 96.5 0.001 2.2E-08 42.9 0.7 32 387-419 1-32 (32)
30 PF00008 EGF: EGF-like domain 96.5 0.0012 2.5E-08 42.6 1.0 32 250-282 1-32 (32)
31 smart00051 DSL delta serrate l 96.3 0.0055 1.2E-07 46.2 3.8 43 100-161 20-63 (63)
32 PF07974 EGF_2: EGF-like domai 96.3 0.0042 9.1E-08 39.9 2.7 26 440-466 7-32 (32)
33 smart00051 DSL delta serrate l 95.9 0.0099 2.2E-07 44.8 3.7 47 406-466 16-63 (63)
34 PF07974 EGF_2: EGF-like domai 95.9 0.0077 1.7E-07 38.7 2.5 22 140-161 11-32 (32)
35 PF12661 hEGF: Human growth fa 95.6 0.0066 1.4E-07 30.5 1.2 12 150-161 2-13 (13)
36 smart00179 EGF_CA Calcium-bind 95.6 0.015 3.2E-07 38.9 3.3 36 336-373 2-39 (39)
37 PF12661 hEGF: Human growth fa 95.6 0.0077 1.7E-07 30.3 1.3 13 271-283 1-13 (13)
38 smart00179 EGF_CA Calcium-bind 95.3 0.021 4.5E-07 38.1 3.3 36 247-284 2-39 (39)
39 KOG3509|consensus 95.3 0.062 1.3E-06 61.2 8.7 110 173-284 718-841 (964)
40 cd00054 EGF_CA Calcium-binding 94.6 0.042 9E-07 36.2 3.2 35 337-373 3-38 (38)
41 cd00054 EGF_CA Calcium-binding 94.3 0.053 1.2E-06 35.6 3.2 34 386-421 4-38 (38)
42 PF01414 DSL: Delta serrate li 93.4 0.023 5E-07 42.8 0.1 43 100-161 20-63 (63)
43 PF03302 VSP: Giardia variant- 92.5 16 0.00034 38.5 21.9 35 151-185 95-135 (397)
44 cd00053 EGF Epidermal growth f 92.3 0.15 3.3E-06 32.8 2.9 30 252-283 5-35 (36)
45 cd00053 EGF Epidermal growth f 92.2 0.17 3.8E-06 32.5 3.1 30 389-420 5-35 (36)
46 PF03302 VSP: Giardia variant- 91.9 19 0.00041 37.9 22.5 13 371-383 241-253 (397)
47 smart00181 EGF Epidermal growt 91.8 0.18 4E-06 32.7 2.8 29 253-284 6-35 (35)
48 PF07645 EGF_CA: Calcium-bindi 91.4 0.12 2.6E-06 35.5 1.6 31 336-368 2-34 (42)
49 KOG3509|consensus 91.1 0.45 9.7E-06 54.4 6.6 166 309-477 716-904 (964)
50 smart00181 EGF Epidermal growt 90.7 0.28 6.1E-06 31.7 2.9 29 390-421 6-35 (35)
51 KOG1388|consensus 90.0 0.17 3.8E-06 47.2 1.8 58 100-162 68-126 (217)
52 KOG1388|consensus 88.6 0.25 5.4E-06 46.1 1.8 63 310-375 63-128 (217)
53 PHA03099 epidermal growth fact 86.9 0.46 9.9E-06 40.4 2.2 27 440-468 52-82 (139)
54 PTZ00214 high cysteine membran 86.9 6.5 0.00014 45.1 12.0 120 148-285 559-701 (800)
55 smart00281 LamB Laminin B doma 86.8 0.57 1.2E-05 40.8 2.9 41 56-99 10-50 (127)
56 PF01414 DSL: Delta serrate li 85.9 0.23 5E-06 37.4 -0.1 48 405-466 15-63 (63)
57 PF07645 EGF_CA: Calcium-bindi 84.7 0.47 1E-05 32.5 1.1 30 385-416 3-34 (42)
58 PF12947 EGF_3: EGF domain; I 83.9 0.5 1.1E-05 31.2 0.9 27 253-281 6-32 (36)
59 PF12947 EGF_3: EGF domain; I 83.4 0.51 1.1E-05 31.2 0.8 27 342-370 6-32 (36)
60 PF00052 Laminin_B: Laminin B 81.9 1.2 2.6E-05 39.2 2.9 39 56-99 5-43 (136)
61 KOG0196|consensus 77.6 2.9 6.2E-05 46.8 4.4 56 357-417 257-318 (996)
62 PHA02887 EGF-like protein; Pro 76.7 1.8 3.9E-05 36.3 2.0 31 254-285 93-123 (126)
63 PF12662 cEGF: Complement Clr- 76.6 2.4 5.1E-05 25.3 2.0 11 269-279 1-11 (24)
64 PHA02887 EGF-like protein; Pro 75.4 2.2 4.8E-05 35.8 2.2 27 440-468 93-123 (126)
65 PTZ00214 high cysteine membran 73.1 1.5E+02 0.0032 34.3 16.8 23 222-244 364-386 (800)
66 KOG0196|consensus 67.0 6.9 0.00015 43.9 4.3 56 309-369 257-318 (996)
67 PHA03099 epidermal growth fact 65.4 3.8 8.3E-05 35.0 1.6 30 255-285 53-82 (139)
68 PF09064 Tme5_EGF_like: Thromb 51.9 12 0.00026 24.2 1.7 20 398-417 8-28 (34)
69 PF14670 FXa_inhibition: Coagu 51.3 8.1 0.00018 25.5 1.0 13 450-462 16-28 (36)
70 KOG3607|consensus 48.8 18 0.00039 41.0 3.9 27 440-468 631-657 (716)
71 KOG3516|consensus 40.6 24 0.00052 41.3 3.2 41 282-326 541-582 (1306)
72 KOG3516|consensus 32.8 33 0.00071 40.3 2.7 38 246-285 544-582 (1306)
73 PF01683 EB: EB module; Inter 32.5 45 0.00098 23.6 2.6 12 309-320 35-46 (52)
74 PF12955 DUF3844: Domain of un 31.6 70 0.0015 26.6 3.8 22 440-462 14-42 (103)
75 KOG3514|consensus 26.9 45 0.00098 38.8 2.5 35 288-326 625-660 (1591)
76 cd00185 TNFR Tumor necrosis fa 23.9 2.2E+02 0.0047 23.2 5.6 47 233-279 34-84 (98)
77 KOG3514|consensus 22.5 57 0.0012 38.0 2.3 35 248-284 624-659 (1591)
78 PF04863 EGF_alliinase: Alliin 22.2 23 0.00051 25.6 -0.5 14 149-162 37-50 (56)
No 1
>KOG0994|consensus
Probab=100.00 E-value=8e-48 Score=409.20 Aligned_cols=353 Identities=38% Similarity=0.969 Sum_probs=307.4
Q ss_pred cCCCCCCCCCCCcccCCCCeeecCCCccCCCCCcCC-----------------------CccccCCcccCCCCCCCCCCC
Q psy14221 130 PCNCSPYGSVSDECHEESGQCNCRIGITGRDCSQCE-----------------------PRHILTSRGCASCEDGYIGDH 186 (546)
Q Consensus 130 ~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C~~C~-----------------------~~C~~~~~~C~~C~~g~~G~~ 186 (546)
++.|++.||.++.|++..|+|.|+|+..|..|++|+ ..|...++.| +|.+|..|..
T Consensus 764 ~CnCnptGSlS~vCn~~GGqCqCkPnVVGR~CdqCApGtyGFGPsGCk~CdC~~~Gs~~~~Cd~~tGQC-~C~~g~ygrq 842 (1758)
T KOG0994|consen 764 MCNCNPTGSLSSVCNPNGGQCQCKPNVVGRRCDQCAPGTYGFGPSGCKACDCNSIGSLDKYCDKITGQC-QCRPGTYGRQ 842 (1758)
T ss_pred ccccCCCccccccccCCCceecccCccccccccccCCcccCcCCccCccccccccccccccccccccce-eeccccchhh
Confidence 467899999999999999999999999999999877 1233367889 9999999999
Q ss_pred CCCCCCCCCCCCCCCCCCceeCCCC--CCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCC---CCCCCccCCCCCCCCc
Q psy14221 187 CESCDAGYYGNPTELGGSCVPCSCG--GGPCDASTGECVQCRGNTEGARCERCKPLYYGDP---RTGDCKPCECNTSGSL 261 (546)
Q Consensus 187 C~~~~~~c~~~~c~~~g~C~~C~C~--~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~---~~~~C~~~~C~~~g~c 261 (546)
|.+|.+++++.| .|.+|+|+ ..+|++.+|.|+.|++.++|.+|++|.+||||++ ....|+|+||..+..-
T Consensus 843 CnqCqpG~WgFP-----eCr~CqCNgHA~~Cd~~tGaCi~CqD~T~G~~CdrCl~GyyGdP~lg~g~~CrPCpCP~gp~S 917 (1758)
T KOG0994|consen 843 CNQCQPGYWGFP-----ECRPCQCNGHADTCDPITGACIDCQDSTTGHSCDRCLDGYYGDPRLGSGIGCRPCPCPDGPAS 917 (1758)
T ss_pred ccccCCCccCCC-----cCccccccCcccccCccccccccccccccccchhhhhccccCCcccCCCCCCCCCCCCCCCcc
Confidence 999999999988 78999999 7899999999999999999999999999999999 4567999999865421
Q ss_pred ----cccccC----CCceEEcCCCccCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCcCCCcEE-ecCCCCcC
Q psy14221 262 ----GDECDS----ISGQCQCKENRAGRTCN-----------LALDCPPCDCDPLGTLSVPQPCHPVSGTC-YCQPGVTG 321 (546)
Q Consensus 262 ----~~~c~~----~~~~C~C~~g~~G~~C~-----------~~~~C~~~~C~~~g~c~~~~~C~~~~~~C-~C~~g~~G 321 (546)
..+|.. ..-.|.|++||+|.+|+ .+..|+.+.|+++..-.+.+.|+..++.| .|....+|
T Consensus 918 g~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG 997 (1758)
T KOG0994|consen 918 GRQHADSCYLDTRTQQIVCHCQEGYSGSRCEICADNHFGNPSEGGTCQKCECSNNIDLYDPGACDVATGACLKCLYHTEG 997 (1758)
T ss_pred chhccccccccccccceeeecccCccccchhhhcccccCCcccCCccccccccCCcCccCCCccchhhchhhhhhhcccc
Confidence 123322 23589999999999998 33458899999999998899999999999 89999999
Q ss_pred CCCCcCCCCCCccCC-CCCCCCCCCCCCCcc-eecCCCCCeeeeCCCCCCCCCCcCCCCCcCCC-CCCCCCCCCCCCccc
Q psy14221 322 DRCDQCDTGYWNFTV-NGCTSCNCNRDGSLH-FSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQ-ELGCASCECNAVGSV 398 (546)
Q Consensus 322 ~~C~~C~~g~~g~~~-~~C~~~~C~~~g~c~-~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~-~~~C~~~~C~~~g~c 398 (546)
++|+.|++||||... ..|..+.|+-.|+-. ..|+..+++|.|.|...|.+|++|.+.+|.+. ..+|.++.|++.+
T Consensus 998 ~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~~~~CDr~tGQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~-- 1075 (1758)
T KOG0994|consen 998 DHCEHCKDGFYGDALRQNCQRCVCNFLGTNSTCHCDRFTGQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIG-- 1075 (1758)
T ss_pred cchhhccccchhHHHHhhhhhheccccccCCccccccccCcCCCCcccccccccccccchhccccCCCCCccCCCccC--
Confidence 999999999999875 568888898777543 35778999999999999999999999999987 7789999998855
Q ss_pred CCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCC---CcccCCCCeEeCCCCCccCCCCCCCCCCCC
Q psy14221 399 NNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSG---MVCSEESGQCVCPPLTRGDLCIQCAPNSYG 475 (546)
Q Consensus 399 ~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~---g~C~~~~~~C~C~~g~~G~~C~~C~~~~~g 475 (546)
..+|+..+|+|.|++||.|+.|++|..-|||.|...|.+|+ |+..+ -+|+..+++|+|.+|..|.+|++|..||.|
T Consensus 1076 ~pqCN~ftGQCqCkpGfGGR~C~qCqel~WGdP~~~C~aCd-Cd~rG~~tpQCdr~tG~C~C~~Gv~G~rCdqCaRgy~G 1154 (1758)
T KOG0994|consen 1076 GPQCNEFTGQCQCKPGFGGRTCSQCQELYWGDPNEKCRACD-CDPRGIETPQCDRATGRCVCRPGVGGPRCDQCARGYSG 1154 (1758)
T ss_pred CccccccccceeccCCCCCcchhHHHHhhcCCCCCCceecC-CCCCCCCCCCccccCCceeecCCCCCcchhhhhhhhcC
Confidence 55899999999999999999999999999999988999998 85543 478888999999999999999999999999
Q ss_pred CCCCCCCCCC-cCCCCCce
Q psy14221 476 YRPLLGCQPC-RCDLRGSM 493 (546)
Q Consensus 476 ~~~~~~C~~c-~c~~~~~~ 493 (546)
.. +.|.+| .|+..|..
T Consensus 1155 ~f--P~C~PCh~CF~~WD~ 1171 (1758)
T KOG0994|consen 1155 QF--PVCVPCHECFQTWDA 1171 (1758)
T ss_pred CC--CCCcchHHHHHHHHH
Confidence 77 567888 78888865
No 2
>KOG0994|consensus
Probab=100.00 E-value=9.6e-41 Score=355.47 Aligned_cols=344 Identities=40% Similarity=0.959 Sum_probs=289.3
Q ss_pred CcccceeecCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCcCCCCCcccCccccCCCCcceeeeeeeccCCCC
Q psy14221 6 SVINVDLVHSSNVEGRQCDQCRPGSFSLSADNLAGCTPCFCFNRSTHCTEAGQYTGNRIGSYSLNLEFSVSWIVMRGDTS 85 (546)
Q Consensus 6 ~~~~~~C~C~~~~~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~s~~C~c~~g~~G~~~~~~g~~c~~~~~~~~~~~~~~ 85 (546)
.+..|.|.||+|+.|.+||+|.||+||.. |.+|.+|.|+... -.+.
T Consensus 778 n~~GGqCqCkPnVVGR~CdqCApGtyGFG---PsGCk~CdC~~~G--------s~~~----------------------- 823 (1758)
T KOG0994|consen 778 NPNGGQCQCKPNVVGRRCDQCAPGTYGFG---PSGCKACDCNSIG--------SLDK----------------------- 823 (1758)
T ss_pred cCCCceecccCccccccccccCCcccCcC---CccCccccccccc--------cccc-----------------------
Confidence 46789999999999999999999999986 5578777775411 1111
Q ss_pred CCCCCCCceeeccCCCCCCCCCCCCcCCCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCee-------------ec
Q psy14221 86 GIPTQVPDIILIMRVREPGYTGPLCDRCAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQC-------------NC 152 (546)
Q Consensus 86 ~~~~~~~~~~~~g~~C~~g~~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C-------------~C 152 (546)
..+.+..-.+|.+|.+|..|+.|.+||.|.+ +|.++.|++ |...|++.+|.| +|
T Consensus 824 -----~Cd~~tGQC~C~~g~ygrqCnqCqpG~WgFP-----eCr~CqCNg---HA~~Cd~~tGaCi~CqD~T~G~~CdrC 890 (1758)
T KOG0994|consen 824 -----YCDKITGQCQCRPGTYGRQCNQCQPGYWGFP-----ECRPCQCNG---HADTCDPITGACIDCQDSTTGHSCDRC 890 (1758)
T ss_pred -----cccccccceeeccccchhhccccCCCccCCC-----cCccccccC---cccccCccccccccccccccccchhhh
Confidence 1112112227888999999999999999986 789999999 999999999977 78
Q ss_pred CCCccC-------CCCCcCC------------Ccccc----CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCC
Q psy14221 153 RIGITG-------RDCSQCE------------PRHIL----TSRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCS 209 (546)
Q Consensus 153 ~~G~~G-------~~C~~C~------------~~C~~----~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~ 209 (546)
..||+| ..|.||+ .+|.. ..-+| .|.+||+|..|+.|+++++++|-. +|+|..|.
T Consensus 891 l~GyyGdP~lg~g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC-~C~~GY~G~RCe~CA~~~fGnP~~-GGtCq~Ce 968 (1758)
T KOG0994|consen 891 LDGYYGDPRLGSGIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVC-HCQEGYSGSRCEICADNHFGNPSE-GGTCQKCE 968 (1758)
T ss_pred hccccCCcccCCCCCCCCCCCCCCCccchhccccccccccccceee-ecccCccccchhhhcccccCCccc-CCcccccc
Confidence 889987 3576654 23433 45679 999999999999999999999977 99999999
Q ss_pred CC-------CCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCCCccCCC
Q psy14221 210 CG-------GGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRT 282 (546)
Q Consensus 210 C~-------~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~ 282 (546)
|+ .+.||..+|.|++|...+.|.+|+.|.+||||+.....|..+.|+--|+..
T Consensus 969 C~~NiD~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~-------------------- 1028 (1758)
T KOG0994|consen 969 CSNNIDLYDPGACDVATGACLKCLYHTEGDHCEHCKDGFYGDALRQNCQRCVCNFLGTNS-------------------- 1028 (1758)
T ss_pred ccCCcCccCCCccchhhchhhhhhhcccccchhhccccchhHHHHhhhhhheccccccCC--------------------
Confidence 97 678999999999999999999999999999999988888888776544320
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCC-CCCCCCCCCCCCCcceecCCCCCee
Q psy14221 283 CNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTV-NGCTSCNCNRDGSLHFSCDVHTGQC 361 (546)
Q Consensus 283 C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~~~C~~~g~c~~~C~~~~~~C 361 (546)
++ .|+..+++|.|.|+..|.+|++|++.+|.+.. ..|.++.|+..+ ..+|+..+++|
T Consensus 1029 ----------------~~----~CDr~tGQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~--~pqCN~ftGQC 1086 (1758)
T KOG0994|consen 1029 ----------------TC----HCDRFTGQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIG--GPQCNEFTGQC 1086 (1758)
T ss_pred ----------------cc----ccccccCcCCCCcccccccccccccchhccccCCCCCccCCCccC--Cccccccccce
Confidence 11 45668999999999999999999999999876 459999998854 23788899999
Q ss_pred eeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcc
Q psy14221 362 SCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASC 441 (546)
Q Consensus 362 ~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C 441 (546)
.|+|||-|+.|++|.+-|||.+...|..+.|+..|.-...|+..+|+|+|.+|..|.+|++|..+|.|.= ..|.+|..|
T Consensus 1087 qCkpGfGGR~C~qCqel~WGdP~~~C~aCdCd~rG~~tpQCdr~tG~C~C~~Gv~G~rCdqCaRgy~G~f-P~C~PCh~C 1165 (1758)
T KOG0994|consen 1087 QCKPGFGGRTCSQCQELYWGDPNEKCRACDCDPRGIETPQCDRATGRCVCRPGVGGPRCDQCARGYSGQF-PVCVPCHEC 1165 (1758)
T ss_pred eccCCCCCcchhHHHHhhcCCCCCCceecCCCCCCCCCCCccccCCceeecCCCCCcchhhhhhhhcCCC-CCCcchHHH
Confidence 9999999999999999999999889999999999999999999999999999999999999999999832 257776666
No 3
>KOG1836|consensus
Probab=100.00 E-value=2.1e-37 Score=357.69 Aligned_cols=458 Identities=34% Similarity=0.758 Sum_probs=365.5
Q ss_pred cccceeecCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCcCCC------------------------------
Q psy14221 7 VINVDLVHSSNVEGRQCDQCRPGSFSLSADNLAGCTPCFCFNRSTHCTEA------------------------------ 56 (546)
Q Consensus 7 ~~~~~C~C~~~~~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~s~~C~c~------------------------------ 56 (546)
..+++|.||++++|.+|++|+||||.+...|+.+|++|+|++++..|...
T Consensus 460 c~~g~c~cK~nveg~~ce~ckpgyfnl~~~n~~gc~~C~c~g~s~~c~~~~~~t~~~~~~s~f~~~s~~~~a~~~~~~~~ 539 (1705)
T KOG1836|consen 460 CDSGRCLCKENVEGTRCERCKPGYFNLEAENPLGCTPCFCSGHSSECDSADGYTGVCVILSNFHQDSCGWVAVQRFGSED 539 (1705)
T ss_pred cCCceeeeccCccceeccccCCcccccCcCCCCCCccceeeccccccccccCcceeEEEecccccccccceeecccCCcc
Confidence 34789999999999999999999999999999999999999988888776
Q ss_pred --------------------------CCcccCccccCCCCcceeeeeeeccCCCCCCCCCCCceeeccC-----CCCCCC
Q psy14221 57 --------------------------GQYTGNRIGSYSLNLEFSVSWIVMRGDTSGIPTQVPDIILIMR-----VREPGY 105 (546)
Q Consensus 57 --------------------------~g~~G~~~~~~g~~c~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~C~~g~ 105 (546)
++|.|+++.+|+..+.+.+.+..... .....++++.+. .++..+
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~v~~~a~a~flG~q~~sy~~~l~~~~~~~~~~~-----~~~~~~~~l~ga~~~~~s~~~~~ 614 (1705)
T KOG1836|consen 540 DQQWSENPSGAAPSAQDNEPVYFQAPAKFLGDQRVSYGSELNFTLRVDACDT-----DPSGADVILEGAGKLNCSTPLQA 614 (1705)
T ss_pred cccccccccccccccccccceeEecchhhhcchhhcccccceeEEEEecccC-----CCcccceEEecCCcccccccccc
Confidence 55666666677777777776655322 223445555554 577888
Q ss_pred CCCCCcCCCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCeeecCCCccCCCCCcCC------------Ccccc---
Q psy14221 106 TGPLCDRCAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQCNCRIGITGRDCSQCE------------PRHIL--- 170 (546)
Q Consensus 106 ~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C~~C~------------~~C~~--- 170 (546)
+|..+..+..++|...- +....+.-..+.+.........+.+..-..+..++.+. +.+..
T Consensus 615 ~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~r~~i~~~~~~~~~~~~~~v~le~a~~~~~~~~~ 689 (1705)
T KOG1836|consen 615 KGNQCSEEAVGFYLFRL-----HEVTIYKWAPSLRLFDFRRLLQNLTRGRIRGTYSDACLGYLDNVTLESARPLGDGAGA 689 (1705)
T ss_pred ccCCCcccccccceecc-----ccccccccccccChhhHhhhhccccccceEEEEcccccccccccchhcccccCCCCCC
Confidence 99998888888876541 11111111111222222222234443333333333221 11111
Q ss_pred ---CCcccCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCceeCCCC--CCCcCCCCCcccCCCCCcCCCCCCcCCCCccc
Q psy14221 171 ---TSRGCASCEDGYIGDHCESCDAGYYGNPTEL--GGSCVPCSCG--GGPCDASTGECVQCRGNTEGARCERCKPLYYG 243 (546)
Q Consensus 171 ---~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~--~g~C~~C~C~--~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g 243 (546)
....| .|++||+|..||.+.+++....-.+ ...|.+|+|+ ..+|++.+|.|. |.++..|.+|++|.+||||
T Consensus 690 ~~~wve~c-~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C~-C~~~t~G~~C~~C~~GfYg 767 (1705)
T KOG1836|consen 690 TDTWVEQC-TCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQCK-CKHNTFGGQCAQCVDGFYG 767 (1705)
T ss_pred ccchhhhc-cCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCcee-cccCCCCCchhhhcCCCCC
Confidence 22348 9999999999999999987765433 3567788888 489999999997 9999999999999999999
Q ss_pred CCC---CCCCccCCCCCCCCccccccCCCceEE-cCCCccCCCCC------------CC---CCCCCCCCCCCCCCCCCC
Q psy14221 244 DPR---TGDCKPCECNTSGSLGDECDSISGQCQ-CKENRAGRTCN------------LA---LDCPPCDCDPLGTLSVPQ 304 (546)
Q Consensus 244 ~~~---~~~C~~~~C~~~g~c~~~c~~~~~~C~-C~~g~~G~~C~------------~~---~~C~~~~C~~~g~c~~~~ 304 (546)
.+. ..+|.+++|.+.+.+..+++...+.|. |++||+|.+|+ .. ..|.+++|..+..-...+
T Consensus 768 ~~~~~~~~dC~~C~Cp~~~~~~~~~~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~~c~c~~n~dp~~~g 847 (1705)
T KOG1836|consen 768 LPDLGTSGDCQPCPCPNGGACGQTPEILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQSCQCNFNVDPNAFG 847 (1705)
T ss_pred ccccCCCCCCccCCCCCChhhcCcCcccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCccceeccccCccccc
Confidence 982 334999999999999988888889998 99999999998 11 358899999888887778
Q ss_pred CCcCCCcEE-ecCCCCcCCCCCcCCCCCCccCC-----CCCCCCCCCCCCCcc--eecCCCCCeeeeCCCCCCCCCCcCC
Q psy14221 305 PCHPVSGTC-YCQPGVTGDRCDQCDTGYWNFTV-----NGCTSCNCNRDGSLH--FSCDVHTGQCSCKPNMTGLACDQCT 376 (546)
Q Consensus 305 ~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~~~-----~~C~~~~C~~~g~c~--~~C~~~~~~C~C~~g~~G~~C~~C~ 376 (546)
.|+..+|.| .|..+.+|.+|+.|+++|||+.. +.|..+.|...|+-. .+|++.+++|.|++...|..|..|.
T Consensus 848 ~c~~~tg~c~~ci~nT~g~~cd~c~~g~~gd~l~~~p~~~c~~c~c~p~gs~~~~~~c~~~tGQcec~~~v~g~~c~~c~ 927 (1705)
T KOG1836|consen 848 NCNRLTGECLKCIHNTAGEYCDLCKEGYFGDPLAPNPEDKCFACGCVPAGSELPSLTCNPVTGQCECKPNVEGRDCLYCF 927 (1705)
T ss_pred cccccccceeeccCCcccccccccccCccccccCCCcCCccccccCccCCcccccccCCCcccceeccCCCCcccccccc
Confidence 999999999 99999999999999999999864 458888898888774 6788999999999999999999999
Q ss_pred CCCcCCC-CCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCC---CcccCCC
Q psy14221 377 EGHWGLQ-ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSG---MVCSEES 452 (546)
Q Consensus 377 ~g~~g~~-~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~---g~C~~~~ 452 (546)
+|+|+++ ..+|.++.|...|+....|+..+++|.|++|.+|.+|++|...++++.+.+|..|. |+.++ ..|++.+
T Consensus 928 ~g~fnl~s~~gC~~c~c~~~gs~~~~c~~~tGqc~c~~gVtgqrc~qc~~~~~~~~~~gc~~c~-c~~~Gs~~~qc~~~~ 1006 (1705)
T KOG1836|consen 928 KGFFNLNSGVGCEPCNCDPTGSESSDCDVGTGQCYCRPGVTGQRCDQCETYHFGFQTEGCGLCE-CDPLGSRGFQCDPED 1006 (1705)
T ss_pred ccccccCCCCCcccccccccccccccccccCCceeeecCccccccCccccCcccccccCCccee-cccCCcccceecccC
Confidence 9999998 77899999999999989999999999999999999999999999999988999886 74333 3688779
Q ss_pred CeEeCCCCCccCCCCCCCCCCCCCC
Q psy14221 453 GQCVCPPLTRGDLCIQCAPNSYGYR 477 (546)
Q Consensus 453 ~~C~C~~g~~G~~C~~C~~~~~g~~ 477 (546)
++|.|++++.|.+|++|.+++|+..
T Consensus 1007 G~c~c~~~~~g~~c~~c~~~~~~~~ 1031 (1705)
T KOG1836|consen 1007 GQCPCRPGFEGRRCDQCEEGFFGNA 1031 (1705)
T ss_pred CeeeecCCCCCcccccccCCccccc
Confidence 9999999999999999999999976
No 4
>KOG1836|consensus
Probab=99.97 E-value=3e-29 Score=290.45 Aligned_cols=445 Identities=33% Similarity=0.779 Sum_probs=340.2
Q ss_pred ceeecCCCCCCCCCCCCCCCCCCC-----CCCCCCCCcCCCCCCCCCCcCCCCCcccCccccCCCCcceeeeeeeccCCC
Q psy14221 10 VDLVHSSNVEGRQCDQCRPGSFSL-----SADNLAGCTPCFCFNRSTHCTEAGQYTGNRIGSYSLNLEFSVSWIVMRGDT 84 (546)
Q Consensus 10 ~~C~C~~~~~G~~C~~C~~g~~~~-----~~~~~~~C~~~~C~~~s~~C~c~~g~~G~~~~~~g~~c~~~~~~~~~~~~~ 84 (546)
-.|+|++|+.|..||+|.|+|... .....++|..++|++.|.+|.-+ ...+..
T Consensus 300 lvc~c~hNT~g~~ce~c~p~fn~rpw~~~ts~~~~Ec~~cnc~g~S~ec~~d----------------------~~l~r~ 357 (1705)
T KOG1836|consen 300 LVCRCQHNTCGLDCERCLPFFNDRPWARATSQTANECEACNCNGRSEECYFD----------------------RELDRR 357 (1705)
T ss_pred ceeecccccccccccccccchhcchhhhhhhcccCceeeccCCCchHhhhhc----------------------HHHHHh
Confidence 599999999999999999988775 34678999999999999888832 111110
Q ss_pred CCCCCCCCceeeccCCCCCCCCCCCCcCCCCCccCCC-CCCCCCCccCCCCCCCCCCCcccCCCCeeecCCCccCCCCCc
Q psy14221 85 SGIPTQVPDIILIMRVREPGYTGPLCDRCAYGYFGFP-SQPNGSCEPCNCSPYGSVSDECHEESGQCNCRIGITGRDCSQ 163 (546)
Q Consensus 85 ~~~~~~~~~~~~~g~~C~~g~~G~~C~~C~~g~~~~~-~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C~~ 163 (546)
.. +...++ .|.+...|.+||+|..+||+.. ......|.++.|+..++.+..| +..|+|.|+|||+|..|+.
T Consensus 358 ~~----~gg~c~---~c~entag~~CerC~~~f~R~~~~~~~~~c~~C~c~~~gsl~~~~-~~~g~c~c~P~v~g~~cD~ 429 (1705)
T KOG1836|consen 358 TG----GGGHCL---DCRENTAGVHCERCLLGFYRSRQVTEPNPCRPCICNSAGSLSAQC-DDTGRCQCKPGVTGQKCDR 429 (1705)
T ss_pred hc----CCcccc---CccccccCcchhhccccccccCCCCCCCcCcccCCCCccchhhhh-ccCCcceecccccccccCc
Confidence 00 111111 6788899999999999999765 2245679999999988888887 6669999999999999997
Q ss_pred CC---------Cc------ccc---------CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------
Q psy14221 164 CE---------PR------HIL---------TSRGCASCEDGYIGDHCESCDAGYYGNPTELGGS--------------- 204 (546)
Q Consensus 164 C~---------~~------C~~---------~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~--------------- 204 (546)
|+ +. |.. ..++| .|++.++|.+|+++.++++...-.|.-.
T Consensus 430 ca~g~~~~~~~~~~~~~~~~~~~~~g~~~~c~~g~c-~cK~nveg~~ce~ckpgyfnl~~~n~~gc~~C~c~g~s~~c~~ 508 (1705)
T KOG1836|consen 430 CAPGFYGLPACGCQLNQVSCQCLPAGSLDNCDSGRC-LCKENVEGTRCERCKPGYFNLEAENPLGCTPCFCSGHSSECDS 508 (1705)
T ss_pred cCcccccCccccccccccccccccccCccccCCcee-eeccCccceeccccCCcccccCcCCCCCCccceeecccccccc
Confidence 76 11 111 24568 8999999999988877765211000000
Q ss_pred -------ce----------------------------------------------------------------------e
Q psy14221 205 -------CV----------------------------------------------------------------------P 207 (546)
Q Consensus 205 -------C~----------------------------------------------------------------------~ 207 (546)
+. .
T Consensus 509 ~~~~t~~~~~~s~f~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~a~flG~q~~sy~~~l~~~~~~~~ 588 (1705)
T KOG1836|consen 509 ADGYTGVCVILSNFHQDSCGWVAVQRFGSEDDQQWSENPSGAAPSAQDNEPVYFQAPAKFLGDQRVSYGSELNFTLRVDA 588 (1705)
T ss_pred ccCcceeEEEecccccccccceeecccCCcccccccccccccccccccccceeEecchhhhcchhhcccccceeEEEEec
Confidence 10 0
Q ss_pred CCCC-----------C-CCc------------------------------------------------------------
Q psy14221 208 CSCG-----------G-GPC------------------------------------------------------------ 215 (546)
Q Consensus 208 C~C~-----------~-~~C------------------------------------------------------------ 215 (546)
+.++ + ..+
T Consensus 589 ~~~~~~~~~~~l~ga~~~~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~i~~~~~~~~ 668 (1705)
T KOG1836|consen 589 CDTDPSGADVILEGAGKLNCSTPLQAKGNQCSEEAVGFYLFRLHEVTIYKWAPSLRLFDFRRLLQNLTRGRIRGTYSDAC 668 (1705)
T ss_pred ccCCCcccceEEecCCccccccccccccCCCcccccccceeccccccccccccccChhhHhhhhccccccceEEEEcccc
Confidence 0000 0 000
Q ss_pred ----------------CCCCC------cccCCCCCcCCCCCCcCCCCcccCCC----CCCCccCCCCCCCCccccccCCC
Q psy14221 216 ----------------DASTG------ECVQCRGNTEGARCERCKPLYYGDPR----TGDCKPCECNTSGSLGDECDSIS 269 (546)
Q Consensus 216 ----------------~~~~g------~C~~C~~g~~G~~Ce~C~~G~~g~~~----~~~C~~~~C~~~g~c~~~c~~~~ 269 (546)
+.... .| +|+.||+|..||.|.+||+.... ...|.++.|+.+ ..+|+..+
T Consensus 669 ~~~~~~v~le~a~~~~~~~~~~~~wve~c-~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh---~~~Cd~~t 744 (1705)
T KOG1836|consen 669 LGYLDNVTLESARPLGDGAGATDTWVEQC-TCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGH---SNICDPRT 744 (1705)
T ss_pred cccccccchhcccccCCCCCCccchhhhc-cCCCCcccchhhhcchhhhcccccCCCCCcccccccCCc---cccccCCC
Confidence 00111 26 49999999999999999987762 233455555554 67889999
Q ss_pred ceEEcCCCccCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCcCCCcEEe-cCCCCcCCCCCcCCCCCCccC
Q psy14221 270 GQCQCKENRAGRTCN-------------LALDCPPCDCDPLGTLSVPQPCHPVSGTCY-CQPGVTGDRCDQCDTGYWNFT 335 (546)
Q Consensus 270 ~~C~C~~g~~G~~C~-------------~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~-C~~g~~G~~C~~C~~g~~g~~ 335 (546)
+.|.|.+.-.|..|+ ...+|.+++|.+++.+.. ..+...+.|. |++||+|.+|+.|..|||+..
T Consensus 745 G~C~C~~~t~G~~C~~C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~--~~~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p 822 (1705)
T KOG1836|consen 745 GQCKCKHNTFGGQCAQCVDGFYGLPDLGTSGDCQPCPCPNGGACGQ--TPEILEVVCKNCPPGYTGLRCEECADGYFGNP 822 (1705)
T ss_pred CceecccCCCCCchhhhcCCCCCccccCCCCCCccCCCCCChhhcC--cCcccceecCCCCCCCcccccccCCCccccCC
Confidence 999999999999887 223499999999998843 4445888997 999999999999999999975
Q ss_pred C------CCCCCCCCCCCCCcc--eecCCCCCee-eeCCCCCCCCCCcCCCCCcCCC-----CCCCCCCCCCCCcccC--
Q psy14221 336 V------NGCTSCNCNRDGSLH--FSCDVHTGQC-SCKPNMTGLACDQCTEGHWGLQ-----ELGCASCECNAVGSVN-- 399 (546)
Q Consensus 336 ~------~~C~~~~C~~~g~c~--~~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~~-----~~~C~~~~C~~~g~c~-- 399 (546)
. ..|.+++|..+..=. ..|+..+|.| .|...-+|.+|+.|.++|||+. .+.|..+.|.+.++-.
T Consensus 823 ~~~~~~~~~c~~c~c~~n~dp~~~g~c~~~tg~c~~ci~nT~g~~cd~c~~g~~gd~l~~~p~~~c~~c~c~p~gs~~~~ 902 (1705)
T KOG1836|consen 823 LGHDGDVRPCQSCQCNFNVDPNAFGNCNRLTGECLKCIHNTAGEYCDLCKEGYFGDPLAPNPEDKCFACGCVPAGSELPS 902 (1705)
T ss_pred CCCCCCcccCccceeccccCccccccccccccceeeccCCcccccccccccCccccccCCCcCCccccccCccCCccccc
Confidence 3 368888887654222 3677789999 8999999999999999999987 3568889999988874
Q ss_pred CccccCCceEecCCCCcCCCCCCCCCCCCCCC-CCCcccCCcccC---CCCcccCCCCeEeCCCCCccCCCCCCCCCCCC
Q psy14221 400 NSCDQITGQCVCRKGVTGRTCDKCRPDYFGFS-VNGCTECASCEQ---SGMVCSEESGQCVCPPLTRGDLCIQCAPNSYG 475 (546)
Q Consensus 400 ~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~-~~~C~~c~~C~~---~~g~C~~~~~~C~C~~g~~G~~C~~C~~~~~g 475 (546)
..|++.+++|.|.+...|..|..|..++|+.. ..+|.+|+ |+. ....|+..+++|.|+++.+|.+|++|...+|+
T Consensus 903 ~~c~~~tGQcec~~~v~g~~c~~c~~g~fnl~s~~gC~~c~-c~~~gs~~~~c~~~tGqc~c~~gVtgqrc~qc~~~~~~ 981 (1705)
T KOG1836|consen 903 LTCNPVTGQCECKPNVEGRDCLYCFKGFFNLNSGVGCEPCN-CDPTGSESSDCDVGTGQCYCRPGVTGQRCDQCETYHFG 981 (1705)
T ss_pred ccCCCcccceeccCCCCccccccccccccccCCCCCccccc-ccccccccccccccCCceeeecCccccccCccccCccc
Confidence 67889999999999999999999999999876 45788876 642 23478888999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCce
Q psy14221 476 YRPLLGCQPCRCDLRGSM 493 (546)
Q Consensus 476 ~~~~~~C~~c~c~~~~~~ 493 (546)
... .+|++|.|...++.
T Consensus 982 ~~~-~gc~~c~c~~~Gs~ 998 (1705)
T KOG1836|consen 982 FQT-EGCGLCECDPLGSR 998 (1705)
T ss_pred ccc-cCCcceecccCCcc
Confidence 886 89999999998864
No 5
>KOG4289|consensus
Probab=99.81 E-value=2.9e-19 Score=195.11 Aligned_cols=96 Identities=27% Similarity=0.579 Sum_probs=80.5
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCC
Q psy14221 171 TSRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDC 250 (546)
Q Consensus 171 ~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C 250 (546)
+..+| .|++||+|..||..+|.||+.||.++|.|.. ..+++.|+ |+++|+|.+||. +.....|
T Consensus 1220 nglrC-rCPpGFTgd~CeTeiDlCYs~pC~nng~C~s--------rEggYtCe-Crpg~tGehCEv-------s~~agrC 1282 (2531)
T KOG4289|consen 1220 NGLRC-RCPPGFTGDYCETEIDLCYSGPCGNNGRCRS--------REGGYTCE-CRPGFTGEHCEV-------SARAGRC 1282 (2531)
T ss_pred CceeE-eCCCCCCcccccchhHhhhcCCCCCCCceEE--------ecCceeEE-ecCCccccceee-------ecccCcc
Confidence 67889 9999999999999999999999999999986 45678996 999999999985 1134568
Q ss_pred ccCCCCCCCCccccccCCCceEEcCCC-ccCCCCC
Q psy14221 251 KPCECNTSGSLGDECDSISGQCQCKEN-RAGRTCN 284 (546)
Q Consensus 251 ~~~~C~~~g~c~~~c~~~~~~C~C~~g-~~G~~C~ 284 (546)
.+-.|.++|+|... ..+.+.|+|+.| |++++|+
T Consensus 1283 vpGvC~nggtC~~~-~nggf~c~Cp~ge~e~prC~ 1316 (2531)
T KOG4289|consen 1283 VPGVCKNGGTCVNL-LNGGFCCHCPYGEFEDPRCE 1316 (2531)
T ss_pred ccceecCCCEEeec-CCCceeccCCCcccCCCceE
Confidence 88889999988763 234578899987 6789998
No 6
>KOG4289|consensus
Probab=99.79 E-value=1.2e-18 Score=190.49 Aligned_cols=128 Identities=35% Similarity=0.854 Sum_probs=99.5
Q ss_pred CCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc-----CCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeC
Q psy14221 290 PPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ-----CDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCK 364 (546)
Q Consensus 290 ~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~-----C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~ 364 (546)
..+||.+.|+|.... ....|.|.|++||+|.+||. |+.||||+ ..|.++.|.....-...|++.+|+|+|+
T Consensus 1720 ~lnpc~~~g~Cv~sp--~a~GY~C~C~~g~~G~~Ce~~~dq~CPrGWWG~--P~CgpC~CavsKgfdp~CnKt~G~CqCK 1795 (2531)
T KOG4289|consen 1720 SLNPCENQGTCVRSP--GAHGYTCECPPGYTGPYCELRADQPCPRGWWGF--PTCGPCNCAVSKGFDPDCNKTNGQCQCK 1795 (2531)
T ss_pred cccccccCceeecCC--CCCceeEECCCcccCcchhhhccCCCCCcccCC--CCccCccccccCCCCCCccccCcceeec
Confidence 345666666663322 12678999999999999984 99999996 5688888887654555788899999999
Q ss_pred CCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcc
Q psy14221 365 PNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCT 436 (546)
Q Consensus 365 ~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~ 436 (546)
..+.-. +..|.++.|. .|+-.-.|+ ..|+|.|++|-.|+.|++|.+.+......+|+
T Consensus 1796 e~hy~~-------------~~~Cl~CdC~-~Gs~Sr~C~-adGqC~C~pgaiGRqCdrCd~pfaevttlgCr 1852 (2531)
T KOG4289|consen 1796 ENHYRP-------------IGSCLPCDCY-FGSDSRECD-ADGQCPCKPGAIGRQCDRCDNPFAEVTTLGCR 1852 (2531)
T ss_pred cccccC-------------CCcceeeccc-cCCCccccc-CCCcCCCCCccccccccccCChhhhccccCcE
Confidence 876543 4558889998 677777888 69999999999999999998766655555565
No 7
>KOG1225|consensus
Probab=99.32 E-value=1.8e-11 Score=128.58 Aligned_cols=201 Identities=29% Similarity=0.729 Sum_probs=129.7
Q ss_pred CCCeeecCCCccCCCCCc--CCCcccc----CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCC
Q psy14221 146 ESGQCNCRIGITGRDCSQ--CEPRHIL----TSRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDAST 219 (546)
Q Consensus 146 ~~g~C~C~~G~~G~~C~~--C~~~C~~----~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~ 219 (546)
..+.|.+.++++|.++.. +...+.. ..+.+ .+..+|+|..|..- .+ ..++...+.+. .
T Consensus 159 ~~~~c~~~~~~~~~~~g~~~~~~~~~~hg~~~~~~~-l~~~~~s~~~~~~~--~~-~~~~~~~~r~~------------~ 222 (525)
T KOG1225|consen 159 KNGVCSLKPNPFGAECGQYKCPNDGSGHGRYYFGNC-LSGISASGETCNQL--GC-NDDCFRTGRCR------------E 222 (525)
T ss_pred hcccccccCCccccccceecCCcCCCCCccceeccc-ccccCcchhhhhcc--cC-Cccceeccccc------------c
Confidence 345788888888877752 2222222 34456 77778888777521 11 11111112222 2
Q ss_pred CcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCC
Q psy14221 220 GECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGT 299 (546)
Q Consensus 220 g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~ 299 (546)
+.+. |..++.+..| .|..+|+|.. |..-.|.++.+....| ..++|+|++||+|.+|+. ..|... |++++.
T Consensus 223 ~~~~-~~~~~~~~ic-~c~~~~~g~~----c~~~~C~~~c~~~g~c--~~G~CIC~~Gf~G~dC~e-~~Cp~~-cs~~g~ 292 (525)
T KOG1225|consen 223 GRCF-CTAGFFDGIC-ECPEGYFGPL----CSTIYCPGGCTGRGQC--VEGRCICPPGFTGDDCDE-LVCPVD-CSGGGV 292 (525)
T ss_pred Cccc-ccccccCcee-ecCCceeCCc----cccccCCCCCcccceE--eCCeEeCCCCCcCCCCCc-ccCCcc-cCCCce
Confidence 3342 5555555566 3666666653 2223343333322222 358999999999999987 557654 777666
Q ss_pred CCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCC
Q psy14221 300 LSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGH 379 (546)
Q Consensus 300 c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~ 379 (546)
+ ..+.|+|+++|+|..|++ ..| +.+|+++| .|. .++|.|.+||+|..|++
T Consensus 293 ~--------~~g~CiC~~g~~G~dCs~----------~~c-padC~g~G----~Ci--~G~C~C~~Gy~G~~C~~----- 342 (525)
T KOG1225|consen 293 C--------VDGECICNPGYSGKDCSI----------RRC-PADCSGHG----KCI--DGECLCDEGYTGELCIQ----- 342 (525)
T ss_pred e--------cCCEeecCCCcccccccc----------ccC-CccCCCCC----ccc--CCceEeCCCCcCCcccc-----
Confidence 5 667999999999999985 233 35799999 775 78999999999999985
Q ss_pred cCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCC
Q psy14221 380 WGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRT 419 (546)
Q Consensus 380 ~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~ 419 (546)
. .|.+++.| ..+ |+|..||.|.+
T Consensus 343 ---------~-~C~~~g~c------v~g-C~C~~Gw~G~d 365 (525)
T KOG1225|consen 343 ---------R-ACSGGGQC------VNG-CKCKKGWRGPD 365 (525)
T ss_pred ---------c-ccCCCcee------ccC-ceeccCccCCC
Confidence 1 37777655 356 99999999988
No 8
>KOG1225|consensus
Probab=99.29 E-value=5.1e-11 Score=125.18 Aligned_cols=133 Identities=38% Similarity=0.947 Sum_probs=102.4
Q ss_pred CceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCC
Q psy14221 269 SGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDG 348 (546)
Q Consensus 269 ~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g 348 (546)
.++|.|+.+|+|+.|+ ...|.. .|.+++.| ..++|+|++||+|.+|++ -.|.. +|+.++
T Consensus 233 ~~ic~c~~~~~g~~c~-~~~C~~-~c~~~g~c--------~~G~CIC~~Gf~G~dC~e----------~~Cp~-~cs~~g 291 (525)
T KOG1225|consen 233 DGICECPEGYFGPLCS-TIYCPG-GCTGRGQC--------VEGRCICPPGFTGDDCDE----------LVCPV-DCSGGG 291 (525)
T ss_pred CceeecCCceeCCccc-cccCCC-CCcccceE--------eCCeEeCCCCCcCCCCCc----------ccCCc-ccCCCc
Confidence 4589999999999988 344543 45555656 789999999999999986 22322 366666
Q ss_pred CcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCC
Q psy14221 349 SLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYF 428 (546)
Q Consensus 349 ~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~ 428 (546)
.+ ..++|+|++||+|..|+. ..| +.+|.++|.|. .++|.|.+||+|..|++
T Consensus 292 ----~~--~~g~CiC~~g~~G~dCs~----------~~c-padC~g~G~Ci------~G~C~C~~Gy~G~~C~~------ 342 (525)
T KOG1225|consen 292 ----VC--VDGECICNPGYSGKDCSI----------RRC-PADCSGHGKCI------DGECLCDEGYTGELCIQ------ 342 (525)
T ss_pred ----ee--cCCEeecCCCcccccccc----------ccC-CccCCCCCccc------CCceEeCCCCcCCcccc------
Confidence 43 456999999999999984 223 35788888762 67999999999999985
Q ss_pred CCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCC
Q psy14221 429 GFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDL 465 (546)
Q Consensus 429 g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~ 465 (546)
. + | .+++.|. .+ |+|+.||.|.+
T Consensus 343 --~-------~-C-~~~g~cv--~g-C~C~~Gw~G~d 365 (525)
T KOG1225|consen 343 --R-------A-C-SGGGQCV--NG-CKCKKGWRGPD 365 (525)
T ss_pred --c-------c-c-CCCceec--cC-ceeccCccCCC
Confidence 1 2 7 7888884 56 99999999988
No 9
>KOG1219|consensus
Probab=99.23 E-value=2.5e-11 Score=138.69 Aligned_cols=112 Identities=25% Similarity=0.544 Sum_probs=93.0
Q ss_pred CCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCc
Q psy14221 337 NGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVT 416 (546)
Q Consensus 337 ~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~ 416 (546)
+.|..+||+++|+|..+ ....|+|.|++-|+|.+||. +...|.+.||..+|+|... ..++.|.|+.||+
T Consensus 3865 d~C~~npCqhgG~C~~~-~~ggy~CkCpsqysG~~CEi--------~~epC~snPC~~GgtCip~--~n~f~CnC~~gyT 3933 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQ-PKGGYKCKCPSQYSGNHCEI--------DLEPCASNPCLTGGTCIPF--YNGFLCNCPNGYT 3933 (4289)
T ss_pred cccccCcccCCCEecCC-CCCceEEeCcccccCccccc--------ccccccCCCCCCCCEEEec--CCCeeEeCCCCcc
Confidence 77889999999977654 24568999999999999996 5678999999999999775 5688999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcccCCcccCCCCccc--CCCCeEeCCCCCccCCCCC
Q psy14221 417 GRTCDKCRPDYFGFSVNGCTECASCEQSGMVCS--EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 417 G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~--~~~~~C~C~~g~~G~~C~~ 468 (546)
|.+||.- | +++|.. ++| .++|.|. ++++.|.|.+||.|..|..
T Consensus 3934 G~~Ce~~--G-----i~eCs~-n~C-~~gg~C~n~~gsf~CncT~g~~gr~c~~ 3978 (4289)
T KOG1219|consen 3934 GKRCEAR--G-----ISECSK-NVC-GTGGQCINIPGSFHCNCTPGILGRTCCA 3978 (4289)
T ss_pred Cceeecc--c-----cccccc-ccc-cCCceeeccCCceEeccChhHhcccCcc
Confidence 9999851 1 445653 258 8999998 6678999999999999954
No 10
>KOG3512|consensus
Probab=99.22 E-value=4e-11 Score=120.28 Aligned_cols=165 Identities=32% Similarity=0.719 Sum_probs=126.5
Q ss_pred CCcEEecCCCCcCCCCCcCCCCCCccC--------CCCCCCCCCCCCCC-cceecC-------CCCCeee-eCCCCCCCC
Q psy14221 309 VSGTCYCQPGVTGDRCDQCDTGYWNFT--------VNGCTSCNCNRDGS-LHFSCD-------VHTGQCS-CKPNMTGLA 371 (546)
Q Consensus 309 ~~~~C~C~~g~~G~~C~~C~~g~~g~~--------~~~C~~~~C~~~g~-c~~~C~-------~~~~~C~-C~~g~~G~~ 371 (546)
...+|.|.++.+|+.|++|++.|+..+ +++|..+.|+.+++ |..... ...+.|. |.....|.+
T Consensus 293 ~~ltCdC~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~SggvClnCrHnTaGrh 372 (592)
T KOG3512|consen 293 SHLTCDCEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRH 372 (592)
T ss_pred CceEEecccCCCCCCcccccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCccccceEeecccCCCCcc
Confidence 458999999999999999999998764 47899999988774 211111 1235674 999999999
Q ss_pred CCcCCCCCcCCC------CCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCC--CCcccCC----
Q psy14221 372 CDQCTEGHWGLQ------ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSV--NGCTECA---- 439 (546)
Q Consensus 372 C~~C~~g~~g~~------~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~--~~C~~c~---- 439 (546)
|..|.+|||... ...|..+.|++.|+-..+|+..+|+|.|++|.+|.+|+.|.++|+.... ..|..++
T Consensus 373 ChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCNq~tGqCpCkeGvtG~tCnrCa~gyqqsrs~vapcik~p~~~~ 452 (592)
T KOG3512|consen 373 CHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCNQTTGQCPCKEGVTGLTCNRCAPGYQQSRSPVAPCIKIPTDAP 452 (592)
T ss_pred cccccCccccCCCCCCchhhhhhhcCCcccccccccccccCCcccCCCCCcccccccccchhhcccCCCcCceecCCCCc
Confidence 999999999875 4568899999999999999999999999999999999999999986542 3333322
Q ss_pred -cccCCCCcccCCCCeEeCCCCCccCCCCC---CCCCCCCC
Q psy14221 440 -SCEQSGMVCSEESGQCVCPPLTRGDLCIQ---CAPNSYGY 476 (546)
Q Consensus 440 -~C~~~~g~C~~~~~~C~C~~g~~G~~C~~---C~~~~~g~ 476 (546)
.+ +++.+ +....+.|+.++.|.++++ |+..|.+.
T Consensus 453 ~~~-~s~ve--~qd~~s~Ck~~~~~~r~n~kkfc~~Dyav~ 490 (592)
T KOG3512|consen 453 TLG-SSGVE--PQDQCSKCKASPGGKRLNQKKFCKKDYAVQ 490 (592)
T ss_pred ccc-CCCCc--chhccccCCCCCcceeccccccCcccccee
Confidence 12 22333 3456678999999999876 55554443
No 11
>KOG3512|consensus
Probab=99.18 E-value=9.1e-11 Score=117.75 Aligned_cols=174 Identities=30% Similarity=0.752 Sum_probs=121.7
Q ss_pred CcccCCCCCcCCCCCCcCCCCcccCC-------CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCC
Q psy14221 220 GECVQCRGNTEGARCERCKPLYYGDP-------RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPC 292 (546)
Q Consensus 220 g~C~~C~~g~~G~~Ce~C~~G~~g~~-------~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~ 292 (546)
-.|. |.++++|+.|++|.+-|++.+ ..++|..+.|+.++. +|.+..++..
T Consensus 295 ltCd-C~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~har---------------------rcrfn~Ely~- 351 (592)
T KOG3512|consen 295 LTCD-CEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHAR---------------------RCRFNMELYR- 351 (592)
T ss_pred eEEe-cccCCCCCCcccccccccCCCccccccCCCccccccccchhhh---------------------hcccchhhhc-
Confidence 4785 999999999999999998877 456677777766543 1211111110
Q ss_pred CCCCCCCCCCCCCCcCCCcEE-ecCCCCcCCCCCcCCCCCCccCC------CCCCCCCCCCCCCcceecCCCCCeeeeCC
Q psy14221 293 DCDPLGTLSVPQPCHPVSGTC-YCQPGVTGDRCDQCDTGYWNFTV------NGCTSCNCNRDGSLHFSCDVHTGQCSCKP 365 (546)
Q Consensus 293 ~C~~~g~c~~~~~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~~~------~~C~~~~C~~~g~c~~~C~~~~~~C~C~~ 365 (546)
-.|.+ ..+.| .|+++..|.+|..|++|||.+.. +.|..+.|++-|+-..+|+..+|+|.|++
T Consensus 352 ---lSgr~--------SggvClnCrHnTaGrhChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCNq~tGqCpCke 420 (592)
T KOG3512|consen 352 ---LSGRR--------SGGVCLNCRHNTAGRHCHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCNQTTGQCPCKE 420 (592)
T ss_pred ---ccCcc--------ccceEeecccCCCCcccccccCccccCCCCCCchhhhhhhcCCcccccccccccccCCcccCCC
Confidence 00111 44577 79999999999999999998743 56889999999998889999999999999
Q ss_pred CCCCCCCCcCCCCCcCCC--CCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCC---CCCCC
Q psy14221 366 NMTGLACDQCTEGHWGLQ--ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK---CRPDY 427 (546)
Q Consensus 366 g~~G~~C~~C~~g~~g~~--~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~---C~~~~ 427 (546)
|.+|..|+.|.+||+-.. +-.|...|=...-.....-......+.|+.+++|.++++ |+..|
T Consensus 421 GvtG~tCnrCa~gyqqsrs~vapcik~p~~~~~~~~s~ve~qd~~s~Ck~~~~~~r~n~kkfc~~Dy 487 (592)
T KOG3512|consen 421 GVTGLTCNRCAPGYQQSRSPVAPCIKIPTDAPTLGSSGVEPQDQCSKCKASPGGKRLNQKKFCKKDY 487 (592)
T ss_pred CCcccccccccchhhcccCCCcCceecCCCCccccCCCCcchhccccCCCCCcceeccccccCcccc
Confidence 999999999999998765 233432221110000000012244578999999998874 44444
No 12
>KOG1219|consensus
Probab=99.15 E-value=4.2e-11 Score=136.90 Aligned_cols=112 Identities=24% Similarity=0.565 Sum_probs=97.3
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALD-CPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~-C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
++|...||+++|+|... ..+.|.|.|++-|+|..||...+ |.++||..+|+|.... ..+.|.|+.||+|.+||.
T Consensus 3865 d~C~~npCqhgG~C~~~-~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~----n~f~CnC~~gyTG~~Ce~ 3939 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQ-PKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFY----NGFLCNCPNGYTGKRCEA 3939 (4289)
T ss_pred cccccCcccCCCEecCC-CCCceEEeCcccccCcccccccccccCCCCCCCCEEEecC----CCeeEeCCCCccCceeec
Confidence 67889999999999875 34568999999999999998775 9999999999994433 889999999999999997
Q ss_pred CCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCC
Q psy14221 327 CDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACD 373 (546)
Q Consensus 327 C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~ 373 (546)
. .+++|..++|.++|.|.++ .+++.|.|.+||.|+.|.
T Consensus 3940 --~-----Gi~eCs~n~C~~gg~C~n~--~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3940 --R-----GISECSKNVCGTGGQCINI--PGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred --c-----cccccccccccCCceeecc--CCceEeccChhHhcccCc
Confidence 1 2789999999999966654 567899999999999986
No 13
>KOG1217|consensus
Probab=99.10 E-value=2.8e-09 Score=114.59 Aligned_cols=239 Identities=29% Similarity=0.609 Sum_probs=159.4
Q ss_pred CCCeeecCCCccCCCCCc---CC---------Ccccc-----CCcccCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCce
Q psy14221 146 ESGQCNCRIGITGRDCSQ---CE---------PRHIL-----TSRGCASCEDGYIGDHCESCDAGYY--GNPTELGGSCV 206 (546)
Q Consensus 146 ~~g~C~C~~G~~G~~C~~---C~---------~~C~~-----~~~~C~~C~~g~~G~~C~~~~~~c~--~~~c~~~g~C~ 206 (546)
....|.|++||.|..|+. |. +.|.. ..+.| .|..||.+..++...+.|. ..+|.+++.|.
T Consensus 108 ~~~~c~c~~g~~~~~~~~~~~C~~~~~~~~~~~~c~~~~~~~~~~~c-~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~ 186 (487)
T KOG1217|consen 108 GSYECTCPPGYQGTPCEGECECVTGPGVCCIDGSCSNGPGSVGPFRC-SCTEGYEGEPCETDLDECIQYSSPCQNGGTCV 186 (487)
T ss_pred CCceeeCCCccccCcCCcceeecCCCCCeeCchhhcCCCCCCCceee-eeCCCcccccccccccccccCCCCcCCCcccc
Confidence 345799999999988874 54 22322 26789 9999999999987656776 44688888887
Q ss_pred eCCCCCCCcCCCCCcccCCCCCcCCCCCCc--------------CCCCcccCCCCCCCccCCCCCC-CCccccccCCCce
Q psy14221 207 PCSCGGGPCDASTGECVQCRGNTEGARCER--------------CKPLYYGDPRTGDCKPCECNTS-GSLGDECDSISGQ 271 (546)
Q Consensus 207 ~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~--------------C~~G~~g~~~~~~C~~~~C~~~-g~c~~~c~~~~~~ 271 (546)
+ ......|. |..+|.+..|+. +.+++.++..... ...+... +.+... ...++
T Consensus 187 ~--------~~~~~~C~-c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~--~~~~~~~~~~c~~~--~~~~~ 253 (487)
T KOG1217|consen 187 N--------TGGSYLCS-CPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVS--IVECASGDGTCVNT--VGSYT 253 (487)
T ss_pred c--------CCCCeeEe-CCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccc--cccccCCCCccccc--CCcee
Confidence 5 22335684 899998888753 3445544331110 1122221 555442 44589
Q ss_pred EEcCCCccCCC---CCCCCCCCCCC-CCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCC----CCCC
Q psy14221 272 CQCKENRAGRT---CNLALDCPPCD-CDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGC----TSCN 343 (546)
Q Consensus 272 C~C~~g~~G~~---C~~~~~C~~~~-C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C----~~~~ 343 (546)
|.|++||.+.. +.....|.... |.++++|.... ..+.|.|++||+|..|..+ .+...| ...+
T Consensus 254 C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~----~~~~C~C~~g~~g~~~~~~------~~~~~C~~~~~~~~ 323 (487)
T KOG1217|consen 254 CRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVP----GSYRCTCPPGFTGRLCTEC------VDVDECSPRNAGGP 323 (487)
T ss_pred eeCCCCccccccceeeeccccCCCCccCCCCeeecCC----CcceeeCCCCCCCCCCccc------cccccccccccCCc
Confidence 99999999987 34455687653 88888883332 4599999999999998211 122344 2445
Q ss_pred CCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCC-CCCCCCCCCCCcccCCccccCCceEecCCCCcCC
Q psy14221 344 CNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQE-LGCASCECNAVGSVNNSCDQITGQCVCRKGVTGR 418 (546)
Q Consensus 344 C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~ 418 (546)
|.+++.|...-....+.|.|.++|.|..|+. . +.|...++.+++.+... ....+.|.|+.+|.+.
T Consensus 324 c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~---------~~~~C~~~~~~~~~~c~~~-~~~~~~c~~~~~~~~~ 389 (487)
T KOG1217|consen 324 CANGGTCNTLGSFGGFRCACGPGFTGRRCED---------SNDECASSPCCPGGTCVNE-TPGSYRCACPAGFAGK 389 (487)
T ss_pred CCCCcccccCCCCCCCCcCCCCCCCCCcccc---------CCccccCCccccCCEeccC-CCCCeEecCCCccccC
Confidence 7777655211112356799999999999984 2 35766667777777653 2457899999999985
No 14
>KOG1217|consensus
Probab=98.91 E-value=3e-08 Score=106.65 Aligned_cols=234 Identities=30% Similarity=0.629 Sum_probs=145.7
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCC
Q psy14221 171 TSRGCASCEDGYIGDHCESCDAGYYGNPT--ELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTG 248 (546)
Q Consensus 171 ~~~~C~~C~~g~~G~~C~~~~~~c~~~~c--~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~ 248 (546)
..+.| .|++||.|..++... .|...+. ...+.|.. .........|+ |..+|.+..++. ..+
T Consensus 108 ~~~~c-~c~~g~~~~~~~~~~-~C~~~~~~~~~~~~c~~-----~~~~~~~~~c~-C~~g~~~~~~~~---------~~~ 170 (487)
T KOG1217|consen 108 GSYEC-TCPPGYQGTPCEGEC-ECVTGPGVCCIDGSCSN-----GPGSVGPFRCS-CTEGYEGEPCET---------DLD 170 (487)
T ss_pred CCcee-eCCCccccCcCCcce-eecCCCCCeeCchhhcC-----CCCCCCceeee-eCCCcccccccc---------ccc
Confidence 67788 899999999987521 2333331 22333331 00001234563 667777766653 114
Q ss_pred CCc--cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 249 DCK--PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 249 ~C~--~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
.|. ..+|.+++.|... ...+.|.|+++|.|..|+.. .+++.| . ....|.+.+++.+..|+.
T Consensus 171 ~C~~~~~~c~~~~~C~~~--~~~~~C~c~~~~~~~~~~~~--------~~~~~c------~-~~~~~~~~~g~~~~~c~~ 233 (487)
T KOG1217|consen 171 ECIQYSSPCQNGGTCVNT--GGSYLCSCPPGYTGSTCETT--------GNGGTC------V-DSVACSCPPGARGPECEV 233 (487)
T ss_pred ccccCCCCcCCCcccccC--CCCeeEeCCCCccCCcCcCC--------CCCceE------e-cceeccCCCCCCCCCccc
Confidence 565 4458888888764 44589999999999988753 223333 2 125678899999988886
Q ss_pred CCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCC-CCCCcccCCccccC
Q psy14221 327 CDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCE-CNAVGSVNNSCDQI 405 (546)
Q Consensus 327 C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~-C~~~g~c~~~c~~~ 405 (546)
.+..|... + +.+.+. ...++|.|++||++..+.. ....+.|.... |.+++.|... ..
T Consensus 234 --------~~~~~~~~---~-~~c~~~--~~~~~C~~~~g~~~~~~~~------~~~~~~C~~~~~c~~~~~C~~~--~~ 291 (487)
T KOG1217|consen 234 --------SIVECASG---D-GTCVNT--VGSYTCRCPEGYTGDACVT------CVDVDSCALIASCPNGGTCVNV--PG 291 (487)
T ss_pred --------ccccccCC---C-Cccccc--CCceeeeCCCCccccccce------eeeccccCCCCccCCCCeeecC--CC
Confidence 33333332 3 544443 3457999999999997411 11255676543 8888888765 33
Q ss_pred CceEecCCCCcCCCCCCCCCCCCCCCCCCcc---cCCcccCCCCccc----CCCCeEeCCCCCccCCCC
Q psy14221 406 TGQCVCRKGVTGRTCDKCRPDYFGFSVNGCT---ECASCEQSGMVCS----EESGQCVCPPLTRGDLCI 467 (546)
Q Consensus 406 ~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~---~c~~C~~~~g~C~----~~~~~C~C~~g~~G~~C~ 467 (546)
.+.|.|++||+|..|..+.. ...|. .-..| .++++|. ...+.|.|.++|.|.+|+
T Consensus 292 ~~~C~C~~g~~g~~~~~~~~------~~~C~~~~~~~~c-~~g~~C~~~~~~~~~~C~c~~~~~g~~C~ 353 (487)
T KOG1217|consen 292 SYRCTCPPGFTGRLCTECVD------VDECSPRNAGGPC-ANGGTCNTLGSFGGFRCACGPGFTGRRCE 353 (487)
T ss_pred cceeeCCCCCCCCCCccccc------cccccccccCCcC-CCCcccccCCCCCCCCcCCCCCCCCCccc
Confidence 48999999999999821111 11222 01136 6777883 234679999999999997
No 15
>KOG1226|consensus
Probab=98.56 E-value=3.6e-07 Score=98.07 Aligned_cols=134 Identities=31% Similarity=0.791 Sum_probs=86.2
Q ss_pred CCcEEecCCCCcCCCCCcCCCCCCcc--CCCCCC----CCCCCCCCCcceecCCCCCeeeeCCCCC----CCCCCcCCCC
Q psy14221 309 VSGTCYCQPGVTGDRCDQCDTGYWNF--TVNGCT----SCNCNRDGSLHFSCDVHTGQCSCKPNMT----GLACDQCTEG 378 (546)
Q Consensus 309 ~~~~C~C~~g~~G~~C~~C~~g~~g~--~~~~C~----~~~C~~~g~c~~~C~~~~~~C~C~~g~~----G~~C~~C~~g 378 (546)
.-++|.|.+||.|.+|| |...-+.. ..+.|+ .-+|++.| .| .=|+|+|.+... |..||-
T Consensus 476 ~CG~C~C~~G~~G~~CE-C~~~~~ss~~~~~~Cr~~~~~~vCSgrG----~C--~CGqC~C~~~~~~~i~G~fCEC---- 544 (783)
T KOG1226|consen 476 VCGQCRCDEGWLGKKCE-CSTDELSSSEEEDKCRENSDSPVCSGRG----DC--VCGQCVCHKPDNGKIYGKFCEC---- 544 (783)
T ss_pred EecceecCCCCCCCccc-CCccccCcHhHHhhccCCCCCCCcCCCC----cE--eCCceEecCCCCCceeeeeeec----
Confidence 45788999999999998 33332222 123444 22687777 44 247899987766 888872
Q ss_pred CcCCCCCCCC---CCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCC--cccCCCCcccCCCC
Q psy14221 379 HWGLQELGCA---SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECA--SCEQSGMVCSEESG 453 (546)
Q Consensus 379 ~~g~~~~~C~---~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~--~C~~~~g~C~~~~~ 453 (546)
+...|. ...|..+|.| .=++|+|.+||+|..|+- +. ..+.|..-+ .| +..|+| .=+
T Consensus 545 ----DnfsC~r~~g~lC~g~G~C------~CG~CvC~~GwtG~~C~C-~~-----std~C~~~~G~iC-SGrG~C--~Cg 605 (783)
T KOG1226|consen 545 ----DNFSCERHKGVLCGGHGRC------ECGRCVCNPGWTGSACNC-PL-----STDTCESSDGQIC-SGRGTC--ECG 605 (783)
T ss_pred ----cCcccccccCcccCCCCeE------eCCcEEcCCCCccCCCCC-CC-----CCccccCCCCcee-CCCcee--eCC
Confidence 122233 2347777765 257899999999999972 21 223343222 46 566777 357
Q ss_pred eEeCCCC-CccCCCCCCCCC
Q psy14221 454 QCVCPPL-TRGDLCIQCAPN 472 (546)
Q Consensus 454 ~C~C~~g-~~G~~C~~C~~~ 472 (546)
+|+|... |.|..||.|+.-
T Consensus 606 ~C~C~~~~~sG~~CE~cptc 625 (783)
T KOG1226|consen 606 RCKCTDPPYSGEFCEKCPTC 625 (783)
T ss_pred ceEcCCCCcCcchhhcCCCC
Confidence 8888766 999999986653
No 16
>KOG1226|consensus
Probab=98.51 E-value=4.2e-07 Score=97.58 Aligned_cols=122 Identities=33% Similarity=0.805 Sum_probs=84.4
Q ss_pred ceEEcCCCccCCCCCCC----------CCCC----CCCCCCCCCCCCCCCCcCCCcEEecCCCCc----CCCCCcCCCCC
Q psy14221 270 GQCQCKENRAGRTCNLA----------LDCP----PCDCDPLGTLSVPQPCHPVSGTCYCQPGVT----GDRCDQCDTGY 331 (546)
Q Consensus 270 ~~C~C~~g~~G~~C~~~----------~~C~----~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~----G~~C~~C~~g~ 331 (546)
++|.|.+||.|.+||-. ..|. ..+|++.|.| .=++|+|.+... |.+||-
T Consensus 478 G~C~C~~G~~G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C--------~CGqC~C~~~~~~~i~G~fCEC----- 544 (783)
T KOG1226|consen 478 GQCRCDEGWLGKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDC--------VCGQCVCHKPDNGKIYGKFCEC----- 544 (783)
T ss_pred cceecCCCCCCCcccCCccccCcHhHHhhccCCCCCCCcCCCCcE--------eCCceEecCCCCCceeeeeeec-----
Confidence 68899999999999822 1243 2267777777 668899988777 888873
Q ss_pred CccCCCCCC---CCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCC---CCCCCCcccCCccccC
Q psy14221 332 WNFTVNGCT---SCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCAS---CECNAVGSVNNSCDQI 405 (546)
Q Consensus 332 ~g~~~~~C~---~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~---~~C~~~g~c~~~c~~~ 405 (546)
+.-.|. ...|.++| .|. -++|+|.+||+|..|+- + ...+.|.+ -.|+..|+| .
T Consensus 545 ---DnfsC~r~~g~lC~g~G----~C~--CG~CvC~~GwtG~~C~C-~-----~std~C~~~~G~iCSGrG~C------~ 603 (783)
T KOG1226|consen 545 ---DNFSCERHKGVLCGGHG----RCE--CGRCVCNPGWTGSACNC-P-----LSTDTCESSDGQICSGRGTC------E 603 (783)
T ss_pred ---cCcccccccCcccCCCC----eEe--CCcEEcCCCCccCCCCC-C-----CCCccccCCCCceeCCCcee------e
Confidence 111232 22477777 452 47999999999999983 2 12455552 236666655 2
Q ss_pred CceEecCCC-CcCCCCCCCCC
Q psy14221 406 TGQCVCRKG-VTGRTCDKCRP 425 (546)
Q Consensus 406 ~~~C~C~~G-~~G~~C~~C~~ 425 (546)
=++|+|... |.|..||.|+.
T Consensus 604 Cg~C~C~~~~~sG~~CE~cpt 624 (783)
T KOG1226|consen 604 CGRCKCTDPPYSGEFCEKCPT 624 (783)
T ss_pred CCceEcCCCCcCcchhhcCCC
Confidence 468999876 99999998665
No 17
>KOG4260|consensus
Probab=98.44 E-value=2.5e-07 Score=87.18 Aligned_cols=158 Identities=23% Similarity=0.464 Sum_probs=93.3
Q ss_pred cCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCC----CCCCCCCCCCC
Q psy14221 274 CKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNG----CTSCNCNRDGS 349 (546)
Q Consensus 274 C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~----C~~~~C~~~g~ 349 (546)
|++|..|+.|..-..=+..||..+|.|...+.=. +++.|.|.+||+|+.|..|.++||....++ |.. |+ +.
T Consensus 132 Cp~gtyGpdCl~Cpggser~C~GnG~C~GdGsR~-GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~--Ch--~~ 206 (350)
T KOG4260|consen 132 CPDGTYGPDCLQCPGGSERPCFGNGSCHGDGSRE-GSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTA--CH--EG 206 (350)
T ss_pred cCCCCcCCccccCCCCCcCCcCCCCcccCCCCCC-CCCcccccCCCCCccccccchHHHHhhcccccchhhh--hh--hh
Confidence 6777777776532222345788888885544322 789999999999999999999998764332 222 21 11
Q ss_pred cceecCCCCCeeeeCCCCCCCCCCcCCCCCcCC-----CCCCCC--CCCCCCCcccCCccccCCceEecCCCCcCC--CC
Q psy14221 350 LHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGL-----QELGCA--SCECNAVGSVNNSCDQITGQCVCRKGVTGR--TC 420 (546)
Q Consensus 350 c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~-----~~~~C~--~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~--~C 420 (546)
|...|. |-.-+.|.+|+.||.-. +++.|+ +.+|...--|.++ ..+|.|..++||.+. .|
T Consensus 207 C~~~Cs----------g~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNt--eGSf~C~dk~Gy~~g~d~C 274 (350)
T KOG4260|consen 207 CLGVCS----------GESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNT--EGSFKCEDKEGYKKGVDEC 274 (350)
T ss_pred hhcccC----------CCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeecC--CCceEecccccccCChHHh
Confidence 222222 11223344444444332 245555 4556655555554 568899999998862 22
Q ss_pred CCCCCCCCCCCCCCcccCCcccCCCCccc--CCCCeEeCCCCCc
Q psy14221 421 DKCRPDYFGFSVNGCTECASCEQSGMVCS--EESGQCVCPPLTR 462 (546)
Q Consensus 421 ~~C~~~~~g~~~~~C~~c~~C~~~~g~C~--~~~~~C~C~~g~~ 462 (546)
+.|.+ .|...+..|. +..++|+|..++.
T Consensus 275 ~~~~d--------------~~~~kn~~c~ni~~~~r~v~f~~~~ 304 (350)
T KOG4260|consen 275 QFCAD--------------VCASKNRPCMNIDGQYRCVCFSGLI 304 (350)
T ss_pred hhhhh--------------hcccCCCCcccCCccEEEEecccce
Confidence 22222 2334456666 4677899887753
No 18
>KOG1214|consensus
Probab=98.41 E-value=6.6e-06 Score=88.40 Aligned_cols=134 Identities=24% Similarity=0.527 Sum_probs=85.3
Q ss_pred CCCCcC-CCCCCcCCCCcccCC----CCCCCcc--CCCCCCCCccccccCCCceEEcCCCcc--C--CCCCCCCC-CCCC
Q psy14221 225 CRGNTE-GARCERCKPLYYGDP----RTGDCKP--CECNTSGSLGDECDSISGQCQCKENRA--G--RTCNLALD-CPPC 292 (546)
Q Consensus 225 C~~g~~-G~~Ce~C~~G~~g~~----~~~~C~~--~~C~~~g~c~~~c~~~~~~C~C~~g~~--G--~~C~~~~~-C~~~ 292 (546)
|.++.. -+.| .|..||-|++ ++++|.. ..|-.+..|+. ++.+++|.|..||. + -+|-.... =.++
T Consensus 708 C~pg~~~~~tc-ecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin--~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n 784 (1289)
T KOG1214|consen 708 CHPGTGVDYTC-ECSSGYQGDGRNCVDENECATGFHRCGPNSVCIN--LPGSYRCECRSGYEFADDRHTCVLITPPAPAN 784 (1289)
T ss_pred ccCCCCcceEE-EEeeccCCCCCCCCChhhhccCCCCCCCCceeec--CCCceeEEEeecceeccCCcceEEecCCCCCC
Confidence 444432 2356 3888888887 4455543 34666666665 47789999988873 3 34542111 1123
Q ss_pred CCCCC-CCCCCCC--CCcC---CCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCC
Q psy14221 293 DCDPL-GTLSVPQ--PCHP---VSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPN 366 (546)
Q Consensus 293 ~C~~~-g~c~~~~--~C~~---~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g 366 (546)
+|..+ .+|...+ .|.. .+|.|.|.|||.|+- +...++|+|.+..|+..++|.++ +.++.|+|++|
T Consensus 785 ~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG-------~~c~dvDeC~psrChp~A~Cynt--pgsfsC~C~pG 855 (1289)
T KOG1214|consen 785 PCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDG-------HQCTDVDECSPSRCHPAATCYNT--PGSFSCRCQPG 855 (1289)
T ss_pred ccccCccccCcCCceEEEecCCceEEEeecCCccCCc-------cccccccccCccccCCCceEecC--CCcceeecccC
Confidence 34333 2222222 2222 678999999999852 22225689999999999977764 68899999999
Q ss_pred CCCC
Q psy14221 367 MTGL 370 (546)
Q Consensus 367 ~~G~ 370 (546)
|.|+
T Consensus 856 y~GD 859 (1289)
T KOG1214|consen 856 YYGD 859 (1289)
T ss_pred ccCC
Confidence 9987
No 19
>KOG4260|consensus
Probab=98.09 E-value=6e-06 Score=78.09 Aligned_cols=162 Identities=23% Similarity=0.480 Sum_probs=100.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCC---CCCCccCC
Q psy14221 178 CEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPR---TGDCKPCE 254 (546)
Q Consensus 178 C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~---~~~C~~~~ 254 (546)
|++|..|++|..++ +=...||..+|.|.- .-=...+|.| +|..||+|+.|..|.++||-... ...|..+
T Consensus 132 Cp~gtyGpdCl~Cp-ggser~C~GnG~C~G-----dGsR~GsGkC-kC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~C- 203 (350)
T KOG4260|consen 132 CPDGTYGPDCLQCP-GGSERPCFGNGSCHG-----DGSREGSGKC-KCETGYTGPLCRYCGIEYFESSRNEQHLVCTAC- 203 (350)
T ss_pred cCCCCcCCccccCC-CCCcCCcCCCCcccC-----CCCCCCCCcc-cccCCCCCccccccchHHHHhhcccccchhhhh-
Confidence 88888899888753 334456777777762 1112357899 59999999999999999986541 1123322
Q ss_pred CCCCCCcccccc-CCCceE-EcCCCccCC--CCCCCCCCC--CCCCCCCCCCCCCCCCcCCCcEEecCCCCcCC--CCCc
Q psy14221 255 CNTSGSLGDECD-SISGQC-QCKENRAGR--TCNLALDCP--PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGD--RCDQ 326 (546)
Q Consensus 255 C~~~g~c~~~c~-~~~~~C-~C~~g~~G~--~C~~~~~C~--~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~--~C~~ 326 (546)
+ ..|...|. ..+-.| .|+.||.-+ .|-+.++|. +.||.....|+. ..++|.|..++||.+. .|+.
T Consensus 204 -h--~~C~~~Csg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvN----teGSf~C~dk~Gy~~g~d~C~~ 276 (350)
T KOG4260|consen 204 -H--EGCLGVCSGESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVN----TEGSFKCEDKEGYKKGVDECQF 276 (350)
T ss_pred -h--hhhhcccCCCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeec----CCCceEecccccccCChHHhhh
Confidence 1 22322332 223356 699999643 455555565 667777666633 3389999999999863 3544
Q ss_pred CCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCC
Q psy14221 327 CDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMT 368 (546)
Q Consensus 327 C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~ 368 (546)
|+..+... ..+|.+ + ...++|+|..++.
T Consensus 277 ~~d~~~~k------n~~c~n------i--~~~~r~v~f~~~~ 304 (350)
T KOG4260|consen 277 CADVCASK------NRPCMN------I--DGQYRCVCFSGLI 304 (350)
T ss_pred hhhhcccC------CCCccc------C--CccEEEEecccce
Confidence 44433322 123433 2 4667899887754
No 20
>KOG1214|consensus
Probab=97.99 E-value=4.5e-05 Score=82.21 Aligned_cols=131 Identities=26% Similarity=0.538 Sum_probs=89.1
Q ss_pred CceEEcCCCccC--CCCCCCCCCC--CCCCCCCCCCCCCCCCcCCCcEEecCCCCc--C--CCCCc-CCCCCCccCCCCC
Q psy14221 269 SGQCQCKENRAG--RTCNLALDCP--PCDCDPLGTLSVPQPCHPVSGTCYCQPGVT--G--DRCDQ-CDTGYWNFTVNGC 339 (546)
Q Consensus 269 ~~~C~C~~g~~G--~~C~~~~~C~--~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~--G--~~C~~-C~~g~~g~~~~~C 339 (546)
.++|.|..||.| .+|....+|. ...|..+..| .-++++++|.|..+|. + -+|-. =++ ..++.|
T Consensus 715 ~~tcecs~g~~gdgr~c~d~~eca~~~~~CGp~s~C----in~pg~~rceC~~gy~F~dd~~tCV~i~~p----ap~n~C 786 (1289)
T KOG1214|consen 715 DYTCECSSGYQGDGRNCVDENECATGFHRCGPNSVC----INLPGSYRCECRSGYEFADDRHTCVLITPP----APANPC 786 (1289)
T ss_pred ceEEEEeeccCCCCCCCCChhhhccCCCCCCCCcee----ecCCCceeEEEeecceeccCCcceEEecCC----CCCCcc
Confidence 579999999964 5787766776 3457777777 3345889998888775 3 24531 000 122333
Q ss_pred C--CCCCCCCCCcceecC---CCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCC
Q psy14221 340 T--SCNCNRDGSLHFSCD---VHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKG 414 (546)
Q Consensus 340 ~--~~~C~~~g~c~~~C~---~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G 414 (546)
. ...|...|.+ .|. ..+|.|.|.|||.|+ |+...+.+.|.+..|.+.+.|..+ +.++.|.|.+|
T Consensus 787 e~g~h~C~i~g~a--~c~~hGgs~y~C~CLPGfsGD-------G~~c~dvDeC~psrChp~A~Cynt--pgsfsC~C~pG 855 (1289)
T KOG1214|consen 787 EDGSHTCAIAGQA--RCVHHGGSTYSCACLPGFSGD-------GHQCTDVDECSPSRCHPAATCYNT--PGSFSCRCQPG 855 (1289)
T ss_pred ccCccccCcCCce--EEEecCCceEEEeecCCccCC-------ccccccccccCccccCCCceEecC--CCcceeecccC
Confidence 3 1234444422 121 356899999999987 444445788999999999999776 67899999999
Q ss_pred CcCC
Q psy14221 415 VTGR 418 (546)
Q Consensus 415 ~~G~ 418 (546)
|.|.
T Consensus 856 y~GD 859 (1289)
T KOG1214|consen 856 YYGD 859 (1289)
T ss_pred ccCC
Confidence 9974
No 21
>KOG1218|consensus
Probab=97.95 E-value=0.0017 Score=66.12 Aligned_cols=269 Identities=32% Similarity=0.741 Sum_probs=143.3
Q ss_pred ccCCCCeeecCCCccCC-CCCc------CCCcccc--CCcccCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCceeCCCCC
Q psy14221 143 CHEESGQCNCRIGITGR-DCSQ------CEPRHIL--TSRGCASCEDGYIGDHCESC-DAGYYGNPTELGGSCVPCSCGG 212 (546)
Q Consensus 143 C~~~~g~C~C~~G~~G~-~C~~------C~~~C~~--~~~~C~~C~~g~~G~~C~~~-~~~c~~~~c~~~g~C~~C~C~~ 212 (546)
+....+.|.|.++|+|. .+.. +...+.. ....| .+..+|.|..|+.. ........+.....|.. +
T Consensus 10 ~~~~~~~c~c~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~~~~~~~c~~~~~c~~----~ 84 (316)
T KOG1218|consen 10 CLGGSGQCFCDPGYTGRLQCEHQAVTSACSGICPCEVNSGEC-GLGYGFVGSVCRIECVCGNAGGGCSQPCRCKN----G 84 (316)
T ss_pred cCCCCCceecCCCccccccccCCCCCccccccCCccCCceeE-ecccccCCCccccccccCCCCCcccCccccCC----C
Confidence 34556788999999994 3322 1122221 45667 78888888887631 11122222222222221 2
Q ss_pred CCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCcc-ccccCCCceEEcCCCccCCCCCC----CC
Q psy14221 213 GPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLG-DECDSISGQCQCKENRAGRTCNL----AL 287 (546)
Q Consensus 213 ~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~-~~c~~~~~~C~C~~g~~G~~C~~----~~ 287 (546)
...+..++.|. ..+|.|..|+. +.+|... +. .+|......|.+..+|.+..|.. ..
T Consensus 85 ~~~~~~~~~~~--~~~~~g~~C~~---------------~~~~~~~--c~~~~C~~~~~~c~~~~~~~~~~C~~~~~~g~ 145 (316)
T KOG1218|consen 85 GTCVSSTGYCH--LNGYEGPQCES---------------PCPCGDG--CAEKTCANPRRECRCGGGYIGEQCGEENLVGL 145 (316)
T ss_pred CcccCCCCccc--CCCCCcccccC---------------CCCcCCc--ccccccCCCccceecCCcCccccccccCCCCC
Confidence 23333444441 56777777753 2222221 00 12222222578888888888875 23
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCC-CCCCCCCCCcceecCCCCCeeeeCCC
Q psy14221 288 DCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCT-SCNCNRDGSLHFSCDVHTGQCSCKPN 366 (546)
Q Consensus 288 ~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~C~~~~~~C~C~~g 366 (546)
.|... |.+ ...++...+.|.|++||.|.++.. ....|. ...+.+++ .|+...+.+.+.+.
T Consensus 146 ~C~~~-c~~------~~~~~~~~~~c~c~~g~~g~~~~~--------~~~~c~~~~~~~~g~----~C~~~~~~~~~~~~ 206 (316)
T KOG1218|consen 146 KCQRD-CQC------TGGCDCKNGICTCQPGFVGVFCVE--------SCSGCSPLTACENGA----KCNRSTGSCLCYPG 206 (316)
T ss_pred CccCC-CCC------ccccCCCCCceeccCCcccccccc--------cCCCcCCCcccCCCC----eeeccccccccCCC
Confidence 35431 111 123344788999999999999975 111133 34566665 67777788888888
Q ss_pred CCCCCCCcCCCCCcCCCCCCCC-CCCCCCCcccCCccccCCceEecCCCCcCCCCCC-CCCCCCCCCCCCcc-cCCcccC
Q psy14221 367 MTGLACDQCTEGHWGLQELGCA-SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK-CRPDYFGFSVNGCT-ECASCEQ 443 (546)
Q Consensus 367 ~~G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~-C~~~~~g~~~~~C~-~c~~C~~ 443 (546)
+.+ .|+.++.+.. |. ...|..+..+... ...+.+.+..+|.+..+.. .+.+..+.. +. .+ .| .
T Consensus 207 ~~~----~~~~~~~~~~---~~~~~~c~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~c-~c-~ 272 (316)
T KOG1218|consen 207 PSG----ACKGGFHGCA---CLRMCDCNEGYPCVND--CGPGICGCVLGEGETVCLRERPKGSLGGS---CFQRC-QC-G 272 (316)
T ss_pred Ccc----cccCCccCCc---CcccccccCCCcccCC--cCCceeEeCcccccccccccCccceecCc---cccce-ee-C
Confidence 876 3444444333 11 2233333332221 2356788888887777654 333333322 22 11 24 3
Q ss_pred CCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 444 SGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 444 ~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
++..+......+.+.++|++..+..
T Consensus 273 ~g~~~~~~~~~~~~~~~~~~~~~~~ 297 (316)
T KOG1218|consen 273 GGLVCRPGKGSCRCSPGAALATCQK 297 (316)
T ss_pred CCCccccccccccCCCccccccccc
Confidence 4445555566778888887777754
No 22
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies
Probab=97.69 E-value=7.3e-05 Score=53.80 Aligned_cols=42 Identities=57% Similarity=1.209 Sum_probs=35.7
Q ss_pred CCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCC
Q psy14221 342 CNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQ 383 (546)
Q Consensus 342 ~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~ 383 (546)
+.|++.++-...|+..+++|.|+++|+|..|++|+++||+..
T Consensus 2 C~C~~~g~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~ 43 (50)
T cd00055 2 CDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLP 43 (50)
T ss_pred CcCcCCCCCCccccCCCCEEeCCCcCCCCCCCCCCCCCccCC
Confidence 456666655457888899999999999999999999999987
No 23
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai.
Probab=97.68 E-value=7.3e-05 Score=52.69 Aligned_cols=38 Identities=53% Similarity=1.168 Sum_probs=31.5
Q ss_pred CCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcC
Q psy14221 344 CNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWG 381 (546)
Q Consensus 344 C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g 381 (546)
|+..|+-...|++.+++|.|+++|+|++|++|++|||+
T Consensus 3 C~~~G~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~g 40 (46)
T smart00180 3 CDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYG 40 (46)
T ss_pred CCCCCCCCCcccCCCCEEECCCCCCCCCCCcCCCCcCC
Confidence 44444443578778899999999999999999999998
No 24
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies
Probab=97.65 E-value=9.4e-05 Score=53.22 Aligned_cols=42 Identities=50% Similarity=1.268 Sum_probs=36.1
Q ss_pred CCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCC
Q psy14221 390 CECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFS 431 (546)
Q Consensus 390 ~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~ 431 (546)
+.|++.++-...|+..+++|.|+++|+|.+|++|+++||+.+
T Consensus 2 C~C~~~g~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~ 43 (50)
T cd00055 2 CDCNGHGSLSGQCDPGTGQCECKPNTTGRRCDRCAPGYYGLP 43 (50)
T ss_pred CcCcCCCCCCccccCCCCEEeCCCcCCCCCCCCCCCCCccCC
Confidence 456676665567888899999999999999999999999877
No 25
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai.
Probab=97.62 E-value=0.00011 Score=51.80 Aligned_cols=39 Identities=51% Similarity=1.252 Sum_probs=32.3
Q ss_pred CCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCC
Q psy14221 391 ECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFG 429 (546)
Q Consensus 391 ~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g 429 (546)
.|+..|+....|++.+++|.|+++|+|++|++|+++||+
T Consensus 2 ~C~~~G~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~g 40 (46)
T smart00180 2 DCDPGGSASGTCDPDTGQCECKPNVTGRRCDRCAPGYYG 40 (46)
T ss_pred cCCCCCCCCCcccCCCCEEECCCCCCCCCCCcCCCCcCC
Confidence 345445544667777999999999999999999999998
No 26
>KOG1218|consensus
Probab=97.60 E-value=0.0036 Score=63.62 Aligned_cols=161 Identities=26% Similarity=0.682 Sum_probs=93.1
Q ss_pred CCCceEEcCCCccCCCCCCCCCC--CCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCC
Q psy14221 267 SISGQCQCKENRAGRTCNLALDC--PPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNC 344 (546)
Q Consensus 267 ~~~~~C~C~~g~~G~~C~~~~~C--~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C 344 (546)
.....|.+..+|.|..|+..... ....|.....|......+..+..|. ..+|.|..|+. ..+|
T Consensus 46 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~~~-~~~~~g~~C~~--------------~~~~ 110 (316)
T KOG1218|consen 46 VNSGECGLGYGFVGSVCRIECVCGNAGGGCSQPCRCKNGGTCVSSTGYCH-LNGYEGPQCES--------------PCPC 110 (316)
T ss_pred CCceeEecccccCCCccccccccCCCCCcccCccccCCCCcccCCCCccc-CCCCCcccccC--------------CCCc
Confidence 45678999999999998743322 2223333333322333333444444 78899988875 2222
Q ss_pred CCCCCcc-eecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCC
Q psy14221 345 NRDGSLH-FSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKC 423 (546)
Q Consensus 345 ~~~g~c~-~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C 423 (546)
... +. .+|......|.+..+|.+..|.. +++++.. |.. .|.+ ...++..++.|.|++||.|.+|..-
T Consensus 111 ~~~--c~~~~C~~~~~~c~~~~~~~~~~C~~--~~~~g~~---C~~-~c~~----~~~~~~~~~~c~c~~g~~g~~~~~~ 178 (316)
T KOG1218|consen 111 GDG--CAEKTCANPRRECRCGGGYIGEQCGE--ENLVGLK---CQR-DCQC----TGGCDCKNGICTCQPGFVGVFCVES 178 (316)
T ss_pred CCc--ccccccCCCccceecCCcCccccccc--cCCCCCC---ccC-CCCC----ccccCCCCCceeccCCccccccccc
Confidence 221 00 13432222688999999998886 4555554 432 1222 2233456889999999999999752
Q ss_pred CCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCcc
Q psy14221 424 RPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRG 463 (546)
Q Consensus 424 ~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G 463 (546)
... |..-..| .+++.|+...+.+.+.+.+.+
T Consensus 179 ~~~--------c~~~~~~-~~g~~C~~~~~~~~~~~~~~~ 209 (316)
T KOG1218|consen 179 CSG--------CSPLTAC-ENGAKCNRSTGSCLCYPGPSG 209 (316)
T ss_pred CCC--------cCCCccc-CCCCeeeccccccccCCCCcc
Confidence 211 2211135 556688766677777776654
No 27
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation. They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.
Probab=97.54 E-value=4e-05 Score=54.92 Aligned_cols=41 Identities=54% Similarity=1.296 Sum_probs=34.3
Q ss_pred CCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCC
Q psy14221 391 ECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFS 431 (546)
Q Consensus 391 ~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~ 431 (546)
.|...++....|++.+++|.|+++|+|++|++|+++||+++
T Consensus 2 ~C~~~~~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~ 42 (49)
T PF00053_consen 2 DCNPHGSSSQTCDPSTGQCVCKPGTTGPRCDQCKPGYFGLP 42 (49)
T ss_dssp SSTTCCBCCSSEEETCEEESBSTTEESTTS-EE-TTEECST
T ss_pred cCcCCCCCCCcccCCCCEEeccccccCCcCcCCCCcccccc
Confidence 46667766678888899999999999999999999999987
No 28
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation. They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.
Probab=97.37 E-value=5.4e-05 Score=54.26 Aligned_cols=41 Identities=54% Similarity=1.101 Sum_probs=32.7
Q ss_pred CCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCC
Q psy14221 343 NCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQ 383 (546)
Q Consensus 343 ~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~ 383 (546)
.|...++....|++.+++|.|+++|+|++|++|+++||+++
T Consensus 2 ~C~~~~~~~~~C~~~~G~C~C~~~~~G~~C~~C~~g~~~~~ 42 (49)
T PF00053_consen 2 DCNPHGSSSQTCDPSTGQCVCKPGTTGPRCDQCKPGYFGLP 42 (49)
T ss_dssp SSTTCCBCCSSEEETCEEESBSTTEESTTS-EE-TTEECST
T ss_pred cCcCCCCCCCcccCCCCEEeccccccCCcCcCCCCcccccc
Confidence 35555555567888899999999999999999999999986
No 29
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=96.47 E-value=0.001 Score=42.91 Aligned_cols=32 Identities=28% Similarity=0.516 Sum_probs=25.8
Q ss_pred CCCCCCCCCcccCCccccCCceEecCCCCcCCC
Q psy14221 387 CASCECNAVGSVNNSCDQITGQCVCRKGVTGRT 419 (546)
Q Consensus 387 C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~ 419 (546)
|.+.+|.++|+|...- ..+++|+|++||+|++
T Consensus 1 C~~~~C~n~g~C~~~~-~~~y~C~C~~G~~G~~ 32 (32)
T PF00008_consen 1 CSSNPCQNGGTCIDLP-GGGYTCECPPGYTGKR 32 (32)
T ss_dssp TTTTSSTTTEEEEEES-TSEEEEEEBTTEESTT
T ss_pred CCCCcCCCCeEEEeCC-CCCEEeECCCCCccCC
Confidence 4456899999998762 2678999999999964
No 30
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=96.47 E-value=0.0012 Score=42.62 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=26.2
Q ss_pred CccCCCCCCCCccccccCCCceEEcCCCccCCC
Q psy14221 250 CKPCECNTSGSLGDECDSISGQCQCKENRAGRT 282 (546)
Q Consensus 250 C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~ 282 (546)
|.+.+|.++|+|...- ...++|+|++||+|++
T Consensus 1 C~~~~C~n~g~C~~~~-~~~y~C~C~~G~~G~~ 32 (32)
T PF00008_consen 1 CSSNPCQNGGTCIDLP-GGGYTCECPPGYTGKR 32 (32)
T ss_dssp TTTTSSTTTEEEEEES-TSEEEEEEBTTEESTT
T ss_pred CCCCcCCCCeEEEeCC-CCCEEeECCCCCccCC
Confidence 4567999999998752 3789999999999974
No 31
>smart00051 DSL delta serrate ligand.
Probab=96.27 E-value=0.0055 Score=46.21 Aligned_cols=43 Identities=26% Similarity=0.518 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCcC-CCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCeeecCCCccCCCC
Q psy14221 100 VREPGYTGPLCDR-CAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQCNCRIGITGRDC 161 (546)
Q Consensus 100 ~C~~g~~G~~C~~-C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C 161 (546)
.|+++|.|..|+. |.+. .... .+.+|+. .|.++|.|||+|++|
T Consensus 20 ~C~~~~yG~~C~~~C~~~--------------~d~~----~~~~Cd~-~G~~~C~~Gw~G~~C 63 (63)
T smart00051 20 TCDENYYGEGCNKFCRPR--------------DDFF----GHYTCDE-NGNKGCLEGWMGPYC 63 (63)
T ss_pred eCCCCCcCCccCCEeCcC--------------cccc----CCccCCc-CCCEecCCCCcCCCC
Confidence 7899999999875 3321 0122 3778854 699999999999876
No 32
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=96.26 E-value=0.0042 Score=39.92 Aligned_cols=26 Identities=31% Similarity=0.728 Sum_probs=22.7
Q ss_pred cccCCCCcccCCCCeEeCCCCCccCCC
Q psy14221 440 SCEQSGMVCSEESGQCVCPPLTRGDLC 466 (546)
Q Consensus 440 ~C~~~~g~C~~~~~~C~C~~g~~G~~C 466 (546)
.| +++|+|+...++|+|.+||+|+.|
T Consensus 7 ~C-~~~G~C~~~~g~C~C~~g~~G~~C 32 (32)
T PF07974_consen 7 IC-SGHGTCVSPCGRCVCDSGYTGPDC 32 (32)
T ss_pred cc-CCCCEEeCCCCEEECCCCCcCCCC
Confidence 48 899999844799999999999987
No 33
>smart00051 DSL delta serrate ligand.
Probab=95.91 E-value=0.0099 Score=44.81 Aligned_cols=47 Identities=28% Similarity=0.575 Sum_probs=34.9
Q ss_pred CceEecCCCCcCCCCCC-CCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCC
Q psy14221 406 TGQCVCRKGVTGRTCDK-CRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLC 466 (546)
Q Consensus 406 ~~~C~C~~G~~G~~C~~-C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C 466 (546)
.+.-.|.++|.|..|+. |.+ -+.. .++.+|+. .+.++|.+||+|..|
T Consensus 16 ~~rv~C~~~~yG~~C~~~C~~------------~~d~-~~~~~Cd~-~G~~~C~~Gw~G~~C 63 (63)
T smart00051 16 QIRVTCDENYYGEGCNKFCRP------------RDDF-FGHYTCDE-NGNKGCLEGWMGPYC 63 (63)
T ss_pred EEEeeCCCCCcCCccCCEeCc------------Cccc-cCCccCCc-CCCEecCCCCcCCCC
Confidence 44567999999999974 322 1113 56788884 699999999999987
No 34
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=95.85 E-value=0.0077 Score=38.69 Aligned_cols=22 Identities=41% Similarity=1.002 Sum_probs=19.2
Q ss_pred CCcccCCCCeeecCCCccCCCC
Q psy14221 140 SDECHEESGQCNCRIGITGRDC 161 (546)
Q Consensus 140 ~~~C~~~~g~C~C~~G~~G~~C 161 (546)
+++|+...++|+|.+||+|++|
T Consensus 11 ~G~C~~~~g~C~C~~g~~G~~C 32 (32)
T PF07974_consen 11 HGTCVSPCGRCVCDSGYTGPDC 32 (32)
T ss_pred CCEEeCCCCEEECCCCCcCCCC
Confidence 8999666799999999999876
No 35
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=95.62 E-value=0.0066 Score=30.52 Aligned_cols=12 Identities=50% Similarity=1.301 Sum_probs=6.9
Q ss_pred eecCCCccCCCC
Q psy14221 150 CNCRIGITGRDC 161 (546)
Q Consensus 150 C~C~~G~~G~~C 161 (546)
|+|++||+|++|
T Consensus 2 C~C~~G~~G~~C 13 (13)
T PF12661_consen 2 CQCPPGWTGPNC 13 (13)
T ss_dssp EEE-TTEETTTT
T ss_pred ccCcCCCcCCCC
Confidence 566666666654
No 36
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=95.58 E-value=0.015 Score=38.89 Aligned_cols=36 Identities=31% Similarity=0.777 Sum_probs=26.8
Q ss_pred CCCCCC-CCCCCCCCcceecCCCCCeeeeCCCCC-CCCCC
Q psy14221 336 VNGCTS-CNCNRDGSLHFSCDVHTGQCSCKPNMT-GLACD 373 (546)
Q Consensus 336 ~~~C~~-~~C~~~g~c~~~C~~~~~~C~C~~g~~-G~~C~ 373 (546)
+++|.. .+|.+++.|.++ ...++|.|++||+ |..|+
T Consensus 2 ~~~C~~~~~C~~~~~C~~~--~g~~~C~C~~g~~~g~~C~ 39 (39)
T smart00179 2 IDECASGNPCQNGGTCVNT--VGSYRCECPPGYTDGRNCE 39 (39)
T ss_pred cccCcCCCCcCCCCEeECC--CCCeEeECCCCCccCCcCC
Confidence 356665 678888866543 5678999999999 88774
No 37
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=95.56 E-value=0.0077 Score=30.28 Aligned_cols=13 Identities=38% Similarity=1.068 Sum_probs=10.5
Q ss_pred eEEcCCCccCCCC
Q psy14221 271 QCQCKENRAGRTC 283 (546)
Q Consensus 271 ~C~C~~g~~G~~C 283 (546)
+|+|++||+|++|
T Consensus 1 ~C~C~~G~~G~~C 13 (13)
T PF12661_consen 1 TCQCPPGWTGPNC 13 (13)
T ss_dssp EEEE-TTEETTTT
T ss_pred CccCcCCCcCCCC
Confidence 5899999999876
No 38
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=95.31 E-value=0.021 Score=38.14 Aligned_cols=36 Identities=25% Similarity=0.659 Sum_probs=27.2
Q ss_pred CCCCcc-CCCCCCCCccccccCCCceEEcCCCcc-CCCCC
Q psy14221 247 TGDCKP-CECNTSGSLGDECDSISGQCQCKENRA-GRTCN 284 (546)
Q Consensus 247 ~~~C~~-~~C~~~g~c~~~c~~~~~~C~C~~g~~-G~~C~ 284 (546)
+++|.. .+|.+++.|..+ .+.+.|.|++||. |..|+
T Consensus 2 ~~~C~~~~~C~~~~~C~~~--~g~~~C~C~~g~~~g~~C~ 39 (39)
T smart00179 2 IDECASGNPCQNGGTCVNT--VGSYRCECPPGYTDGRNCE 39 (39)
T ss_pred cccCcCCCCcCCCCEeECC--CCCeEeECCCCCccCCcCC
Confidence 345655 678887777653 5678999999999 88774
No 39
>KOG3509|consensus
Probab=95.30 E-value=0.062 Score=61.16 Aligned_cols=110 Identities=37% Similarity=0.861 Sum_probs=73.3
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCceeCCCC--CCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCC
Q psy14221 173 RGCASCEDGYIGDHCESCDAGYYGNP--TELGGSCVPCSCG--GGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTG 248 (546)
Q Consensus 173 ~~C~~C~~g~~G~~C~~~~~~c~~~~--c~~~g~C~~C~C~--~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~ 248 (546)
..| +|+++|.|..|+.++......- -...+.+..|.++ ...|+...+.|..|.+++.|.+|+.|.+||+++..+.
T Consensus 718 ~~C-~c~~g~~G~~ce~c~e~~~ls~t~~~~~~~~~~c~~~~h~~~c~~~~~~nt~~q~~~~~~~~~~~~~g~~~da~~g 796 (964)
T KOG3509|consen 718 EQC-QCPKGLVGTSCEDCAEGYTLSTTGGLYPGLCEDCECNSHISQCEDDLGYNTDCQNNTEGDRCELCSPGTYGDARRG 796 (964)
T ss_pred ccc-ccCccccCcccccccccccccccCCcCcccCcccccCCCcccccccccccccccccCccceeeecCCCccccCccC
Confidence 368 8999999999997766544321 0112344556666 6788888888889999999999999999999998432
Q ss_pred ---CCccCCCCCCCC------ccccccCCCceE-EcCCCccCCCCC
Q psy14221 249 ---DCKPCECNTSGS------LGDECDSISGQC-QCKENRAGRTCN 284 (546)
Q Consensus 249 ---~C~~~~C~~~g~------c~~~c~~~~~~C-~C~~g~~G~~C~ 284 (546)
++.+ .+..... .....+.....| .|+++++|.+|+
T Consensus 797 ~~~D~~p-~~~l~~~~~~~~r~~l~~~~~~~~~~~~p~~~~g~~~~ 841 (964)
T KOG3509|consen 797 TPEDCRP-ATALTIQCSCNNRSPLSCDGFGPGCLLCPHNTEGTTCE 841 (964)
T ss_pred CcccCCc-cchhhhhhhhcccCccccccCCCCcccCCCCccccchh
Confidence 2333 1111111 111222333455 689999999998
No 40
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=94.59 E-value=0.042 Score=36.18 Aligned_cols=35 Identities=34% Similarity=0.788 Sum_probs=25.3
Q ss_pred CCCCC-CCCCCCCCcceecCCCCCeeeeCCCCCCCCCC
Q psy14221 337 NGCTS-CNCNRDGSLHFSCDVHTGQCSCKPNMTGLACD 373 (546)
Q Consensus 337 ~~C~~-~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~ 373 (546)
++|.. .+|.+++.|... ...+.|.|++||.|..|+
T Consensus 3 ~~C~~~~~C~~~~~C~~~--~~~~~C~C~~g~~g~~C~ 38 (38)
T cd00054 3 DECASGNPCQNGGTCVNT--VGSYRCSCPPGYTGRNCE 38 (38)
T ss_pred ccCCCCCCcCCCCEeECC--CCCeEeECCCCCcCCcCC
Confidence 45655 578777755543 456899999999998764
No 41
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=94.29 E-value=0.053 Score=35.64 Aligned_cols=34 Identities=38% Similarity=0.787 Sum_probs=25.0
Q ss_pred CCCC-CCCCCCcccCCccccCCceEecCCCCcCCCCC
Q psy14221 386 GCAS-CECNAVGSVNNSCDQITGQCVCRKGVTGRTCD 421 (546)
Q Consensus 386 ~C~~-~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~ 421 (546)
.|.. .+|.+++.|... ...+.|.|++||.|..|+
T Consensus 4 ~C~~~~~C~~~~~C~~~--~~~~~C~C~~g~~g~~C~ 38 (38)
T cd00054 4 ECASGNPCQNGGTCVNT--VGSYRCSCPPGYTGRNCE 38 (38)
T ss_pred cCCCCCCcCCCCEeECC--CCCeEeECCCCCcCCcCC
Confidence 4554 567777777654 457899999999998774
No 42
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates. In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.
Probab=93.44 E-value=0.023 Score=42.80 Aligned_cols=43 Identities=30% Similarity=0.581 Sum_probs=23.5
Q ss_pred CCCCCCCCCCCcC-CCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCeeecCCCccCCCC
Q psy14221 100 VREPGYTGPLCDR-CAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQCNCRIGITGRDC 161 (546)
Q Consensus 100 ~C~~g~~G~~C~~-C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C 161 (546)
+|.++|.|+.|+. |.+.-. -. .+-+|+ ..|.=+|.+||+|++|
T Consensus 20 ~C~~nyyG~~C~~~C~~~~d--------------~~----ghy~Cd-~~G~~~C~~Gw~G~~C 63 (63)
T PF01414_consen 20 VCDENYYGPNCSKFCKPRDD--------------SF----GHYTCD-SNGNKVCLPGWTGPNC 63 (63)
T ss_dssp ---TTEETTTT-EE---EEE--------------TT----EEEEE--SS--EEE-TTEESTTS
T ss_pred ECCCCCCCccccCCcCCCcC--------------Cc----CCcccC-CCCCCCCCCCCcCCCC
Confidence 7999999999986 544210 01 267885 5788899999999876
No 43
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=92.54 E-value=16 Score=38.51 Aligned_cols=35 Identities=26% Similarity=0.643 Sum_probs=25.4
Q ss_pred ecCCCcc--CCCCCcCCCcccc----CCcccCCCCCCCCCC
Q psy14221 151 NCRIGIT--GRDCSQCEPRHIL----TSRGCASCEDGYIGD 185 (546)
Q Consensus 151 ~C~~G~~--G~~C~~C~~~C~~----~~~~C~~C~~g~~G~ 185 (546)
.|++||+ +..|.+|...|.. ....|+.|++||.-.
T Consensus 95 ~C~~G~y~~~~~C~~C~~~C~~C~~~~~~~Ct~C~~g~~L~ 135 (397)
T PF03302_consen 95 ECPDGYYKNGNKCVPCHESCATCSGGAPNQCTSCKPGKVLK 135 (397)
T ss_pred CCCCCccccCCCCCCCCccccccCCCCCCCCcccCCCcccc
Confidence 8899998 7888887755543 456787888887533
No 44
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=92.30 E-value=0.15 Score=32.78 Aligned_cols=30 Identities=23% Similarity=0.571 Sum_probs=22.6
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCC-CC
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGR-TC 283 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~-~C 283 (546)
..+|.+++.|... ...+.|.|++||.|. .|
T Consensus 5 ~~~C~~~~~C~~~--~~~~~C~C~~g~~g~~~C 35 (36)
T cd00053 5 SNPCSNGGTCVNT--PGSYRCVCPPGYTGDRSC 35 (36)
T ss_pred CCCCCCCCEEecC--CCCeEeECCCCCcccCCc
Confidence 4567777777654 467899999999998 65
No 45
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=92.19 E-value=0.17 Score=32.51 Aligned_cols=30 Identities=37% Similarity=0.738 Sum_probs=22.6
Q ss_pred CCCCCCCcccCCccccCCceEecCCCCcCC-CC
Q psy14221 389 SCECNAVGSVNNSCDQITGQCVCRKGVTGR-TC 420 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~-~C 420 (546)
..+|.+++.|... ...++|.|+.||.|. .|
T Consensus 5 ~~~C~~~~~C~~~--~~~~~C~C~~g~~g~~~C 35 (36)
T cd00053 5 SNPCSNGGTCVNT--PGSYRCVCPPGYTGDRSC 35 (36)
T ss_pred CCCCCCCCEEecC--CCCeEeECCCCCcccCCc
Confidence 3467777777665 357899999999998 55
No 46
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=91.87 E-value=19 Score=37.92 Aligned_cols=13 Identities=23% Similarity=0.613 Sum_probs=8.0
Q ss_pred CCCcCCCCCcCCC
Q psy14221 371 ACDQCTEGHWGLQ 383 (546)
Q Consensus 371 ~C~~C~~g~~g~~ 383 (546)
.|..+.+||+-.+
T Consensus 241 ~C~~~~~GY~~~~ 253 (397)
T PF03302_consen 241 TCTACAPGYFLNP 253 (397)
T ss_pred ccccccccccccC
Confidence 5666777766443
No 47
>smart00181 EGF Epidermal growth factor-like domain.
Probab=91.77 E-value=0.18 Score=32.67 Aligned_cols=29 Identities=21% Similarity=0.521 Sum_probs=21.3
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccC-CCCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAG-RTCN 284 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G-~~C~ 284 (546)
.+|.++ .|... .+.++|.|++||.| ..|+
T Consensus 6 ~~C~~~-~C~~~--~~~~~C~C~~g~~g~~~C~ 35 (35)
T smart00181 6 GPCSNG-TCINT--PGSYTCSCPPGYTGDKRCE 35 (35)
T ss_pred CCCCCC-EEECC--CCCeEeECCCCCccCCccC
Confidence 466666 56543 56799999999999 6663
No 48
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=91.40 E-value=0.12 Score=35.49 Aligned_cols=31 Identities=26% Similarity=0.669 Sum_probs=23.9
Q ss_pred CCCCCC--CCCCCCCCcceecCCCCCeeeeCCCCC
Q psy14221 336 VNGCTS--CNCNRDGSLHFSCDVHTGQCSCKPNMT 368 (546)
Q Consensus 336 ~~~C~~--~~C~~~g~c~~~C~~~~~~C~C~~g~~ 368 (546)
|++|.. ..|..++.|.++ .++|+|.|++||.
T Consensus 2 idEC~~~~~~C~~~~~C~N~--~Gsy~C~C~~Gy~ 34 (42)
T PF07645_consen 2 IDECAEGPHNCPENGTCVNT--EGSYSCSCPPGYE 34 (42)
T ss_dssp SSTTTTTSSSSSTTSEEEEE--TTEEEEEESTTEE
T ss_pred ccccCCCCCcCCCCCEEEcC--CCCEEeeCCCCcE
Confidence 566663 458778877765 6889999999998
No 49
>KOG3509|consensus
Probab=91.11 E-value=0.45 Score=54.44 Aligned_cols=166 Identities=27% Similarity=0.656 Sum_probs=96.3
Q ss_pred CCcEEecCCCCcCCCCCcCCCCCCccC-----CCCCCCCCCCCCCCcceecCCCCCee-eeCCCCCCCCCCcCCCCCcCC
Q psy14221 309 VSGTCYCQPGVTGDRCDQCDTGYWNFT-----VNGCTSCNCNRDGSLHFSCDVHTGQC-SCKPNMTGLACDQCTEGHWGL 382 (546)
Q Consensus 309 ~~~~C~C~~g~~G~~C~~C~~g~~g~~-----~~~C~~~~C~~~g~c~~~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~ 382 (546)
...+|+|++++.|..|+.|.++|.-.. ...+..+.|..+. ..|....+.| .|+....|.+|+.|.+|+++.
T Consensus 716 ~~~~C~c~~g~~G~~ce~c~e~~~ls~t~~~~~~~~~~c~~~~h~---~~c~~~~~~nt~~q~~~~~~~~~~~~~g~~~d 792 (964)
T KOG3509|consen 716 EVEQCQCPKGLVGTSCEDCAEGYTLSTTGGLYPGLCEDCECNSHI---SQCEDDLGYNTDCQNNTEGDRCELCSPGTYGD 792 (964)
T ss_pred hccccccCccccCcccccccccccccccCCcCcccCcccccCCCc---ccccccccccccccccCccceeeecCCCcccc
Confidence 445899999999999999999876543 2334445555554 3454444555 478888999999999999997
Q ss_pred C----CCCCCC-C----CCCCCcccCCccccCCceE-ecCCCCcCCCCCCCCCCCCCCCCCCcc-cCCccc-CCCCccc-
Q psy14221 383 Q----ELGCAS-C----ECNAVGSVNNSCDQITGQC-VCRKGVTGRTCDKCRPDYFGFSVNGCT-ECASCE-QSGMVCS- 449 (546)
Q Consensus 383 ~----~~~C~~-~----~C~~~g~c~~~c~~~~~~C-~C~~G~~G~~C~~C~~~~~g~~~~~C~-~c~~C~-~~~g~C~- 449 (546)
. ...+.+ + +++-+-......+.....| .|+++.+|.+|+.+..+++++..++=. .+.++- ...+.|.
T Consensus 793 a~~g~~~D~~p~~~l~~~~~~~~r~~l~~~~~~~~~~~~p~~~~g~~~~~~~~~~~~~atdgS~~~~~~~~~~~~~~~~~ 872 (964)
T KOG3509|consen 793 ARRGTPEDCRPATALTIQCSCNNRSPLSCDGFGPGCLLCPHNTEGTTCERVKAGYYGFATDGSPYDCSPCLLRGASDCIV 872 (964)
T ss_pred CccCCcccCCccchhhhhhhhcccCccccccCCCCcccCCCCccccchhhhccccccccCcCCccccccccCccccceee
Confidence 6 222222 0 1111100111122233345 599999999999999999987644311 111120 1112233
Q ss_pred CCC---CeE-eCCCCCccCCCCCCCCCCCCCC
Q psy14221 450 EES---GQC-VCPPLTRGDLCIQCAPNSYGYR 477 (546)
Q Consensus 450 ~~~---~~C-~C~~g~~G~~C~~C~~~~~g~~ 477 (546)
... -.| ..+.+-.|...+.+..++|...
T Consensus 873 ~~r~p~~~~~~~p~~~q~~~~~~e~~~~~~~~ 904 (964)
T KOG3509|consen 873 SGRGPQVTCRIPPQGLQGRNQNEEATGYYRDN 904 (964)
T ss_pred ccCCCCCCCCCCCccccccccccccCcccccc
Confidence 111 122 2344455555666777766655
No 50
>smart00181 EGF Epidermal growth factor-like domain.
Probab=90.70 E-value=0.28 Score=31.74 Aligned_cols=29 Identities=28% Similarity=0.631 Sum_probs=20.9
Q ss_pred CCCCCCcccCCccccCCceEecCCCCcC-CCCC
Q psy14221 390 CECNAVGSVNNSCDQITGQCVCRKGVTG-RTCD 421 (546)
Q Consensus 390 ~~C~~~g~c~~~c~~~~~~C~C~~G~~G-~~C~ 421 (546)
.+|.++ .|... ...++|.|++||.| ..|+
T Consensus 6 ~~C~~~-~C~~~--~~~~~C~C~~g~~g~~~C~ 35 (35)
T smart00181 6 GPCSNG-TCINT--PGSYTCSCPPGYTGDKRCE 35 (35)
T ss_pred CCCCCC-EEECC--CCCeEeECCCCCccCCccC
Confidence 356665 56554 45789999999999 6653
No 51
>KOG1388|consensus
Probab=89.99 E-value=0.17 Score=47.15 Aligned_cols=58 Identities=34% Similarity=0.940 Sum_probs=47.7
Q ss_pred CCCCCCCCCCCcCCCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCeeec-CCCccCCCCC
Q psy14221 100 VREPGYTGPLCDRCAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQCNC-RIGITGRDCS 162 (546)
Q Consensus 100 ~C~~g~~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C-~~G~~G~~C~ 162 (546)
.|+.+-+|..|+.|..+|+|. .+++.|.++.|++ +...|...+++|.| ..|+.|+.|+
T Consensus 68 ~~~N~~~g~~c~kc~~g~~Gd--tN~g~c~~~~~~g---~~~~~~~~~~~c~c~~kgvvgd~c~ 126 (217)
T KOG1388|consen 68 RCENGTTGAHCEKCIVGFYGD--TNGGKCQPCDCNG---GASACVTLTGKCFCTTKGVVGDLCP 126 (217)
T ss_pred eccCccccccCCceEEEEEec--CCCCccCHhhhcC---CeeeeeccCCccccccceEecccCc
Confidence 578899999999999999997 5788899999988 56667778888888 4577776665
No 52
>KOG1388|consensus
Probab=88.56 E-value=0.25 Score=46.11 Aligned_cols=63 Identities=32% Similarity=0.906 Sum_probs=49.4
Q ss_pred CcEE-ecCCCCcCCCCCcCCCCCCcc-CCCCCCCCCCCCCCCcceecCCCCCeeee-CCCCCCCCCCcC
Q psy14221 310 SGTC-YCQPGVTGDRCDQCDTGYWNF-TVNGCTSCNCNRDGSLHFSCDVHTGQCSC-KPNMTGLACDQC 375 (546)
Q Consensus 310 ~~~C-~C~~g~~G~~C~~C~~g~~g~-~~~~C~~~~C~~~g~c~~~C~~~~~~C~C-~~g~~G~~C~~C 375 (546)
...| .|..+.+|..|++|..+|+|+ +-..|+++.|+.++ ..|...+++|.| .-+++|+.|+.|
T Consensus 63 ~~v~~~~~N~~~g~~c~kc~~g~~GdtN~g~c~~~~~~g~~---~~~~~~~~~c~c~~kgvvgd~c~~~ 128 (217)
T KOG1388|consen 63 QHVCWRCENGTTGAHCEKCIVGFYGDTNGGKCQPCDCNGGA---SACVTLTGKCFCTTKGVVGDLCPKC 128 (217)
T ss_pred ceeeeeccCccccccCCceEEEEEecCCCCccCHhhhcCCe---eeeeccCCccccccceEecccCccc
Confidence 3344 588999999999999999994 44568888787665 345568899999 688999998863
No 53
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=86.91 E-value=0.46 Score=40.45 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=21.5
Q ss_pred cccCCCCccc----CCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCS----EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~----~~~~~C~C~~g~~G~~C~~ 468 (546)
.| . +|+|. .....|.|..||+|.+||.
T Consensus 52 YC-l-HG~C~yI~dl~~~~CrC~~GYtGeRCEh 82 (139)
T PHA03099 52 YC-L-HGDCIHARDIDGMYCRCSHGYTGIRCQH 82 (139)
T ss_pred Ee-E-CCEEEeeccCCCceeECCCCcccccccc
Confidence 47 3 35887 3567999999999999985
No 54
>PTZ00214 high cysteine membrane protein Group 4; Provisional
Probab=86.86 E-value=6.5 Score=45.09 Aligned_cols=120 Identities=24% Similarity=0.649 Sum_probs=60.0
Q ss_pred Cee-ecCCCccC---CCCCcCCCcccc----CCcccCCCCCCCCCC--------CC---CCCCCCCCCCCCCCCCCceeC
Q psy14221 148 GQC-NCRIGITG---RDCSQCEPRHIL----TSRGCASCEDGYIGD--------HC---ESCDAGYYGNPTELGGSCVPC 208 (546)
Q Consensus 148 g~C-~C~~G~~G---~~C~~C~~~C~~----~~~~C~~C~~g~~G~--------~C---~~~~~~c~~~~c~~~g~C~~C 208 (546)
++| .|.+||+- ..|.+|...|.. ....|.+|+.+|.=. .| ..+.++++.+ +..|++|
T Consensus 559 g~Ct~C~~GYyl~~~~~C~~Cd~~C~~C~~~~~~~C~sC~~g~yL~~~~~~~~g~Cv~~~~C~~GYY~d----~~~C~~C 634 (800)
T PTZ00214 559 GKCTTTKKGYGISPDGKLLECDPTCLACTAPGPGRCTRCPSDKLLKRASGAATGSCVDPGACVDGYYAD----GDACLPC 634 (800)
T ss_pred CcccccccCcccCCCCccccccchhhhccCCCCCcceECCCCCEeccccccccccccCcccCCCCcccC----CCccccC
Confidence 445 46677762 235555433332 345666677776421 13 2445555542 2345443
Q ss_pred CCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCCCcc----CCCCC
Q psy14221 209 SCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKENRA----GRTCN 284 (546)
Q Consensus 209 ~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~----G~~C~ 284 (546)
. ...|.+|.. ...|..|..+||...+...|.. .|.....-... .....+|+|..||. +..|.
T Consensus 635 ~---------~~~C~tC~~---~~~C~~C~~~~~ls~~~~~C~~-~C~~~~~~~~~-~~~~~~C~C~~g~~p~~~~~~C~ 700 (800)
T PTZ00214 635 A---------TPGCKTCGH---ASFCTECAGELFVSLDGQSCLE-ECTGDKVVGEV-SGGVRRCWCERGFLPALDRSGCV 700 (800)
T ss_pred C---------ccccccccC---CCCcCcCCCCceecCcCCchhh-cCCCccccccc-cCCcceeEecCCcccccCCCccc
Confidence 1 123434532 3468889999887765555643 33322110000 01235899999996 44554
Q ss_pred C
Q psy14221 285 L 285 (546)
Q Consensus 285 ~ 285 (546)
.
T Consensus 701 ~ 701 (800)
T PTZ00214 701 L 701 (800)
T ss_pred c
Confidence 3
No 55
>smart00281 LamB Laminin B domain.
Probab=86.83 E-value=0.57 Score=40.84 Aligned_cols=41 Identities=32% Similarity=0.571 Sum_probs=33.5
Q ss_pred CCCcccCccccCCCCcceeeeeeeccCCCCCCCCCCCceeeccC
Q psy14221 56 AGQYTGNRIGSYSLNLEFSVSWIVMRGDTSGIPTQVPDIILIMR 99 (546)
Q Consensus 56 ~~g~~G~~~~~~g~~c~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 99 (546)
++.|+||+..+||++++|++.++...+ +.....+++++.|+
T Consensus 10 P~~flGn~~~SYGg~L~ytl~~~~~~~---g~~~~~pdViL~G~ 50 (127)
T smart00281 10 PEQFLGDKVTSYGGKLRYTLSFDGRRG---GTHVSAPDVILEGN 50 (127)
T ss_pred ChHHcCcceeccCCEEEEEEEEEccCC---CccCCCCCEEEECC
Confidence 468999999999999999998887543 34556789999876
No 56
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates. In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.
Probab=85.87 E-value=0.23 Score=37.44 Aligned_cols=48 Identities=29% Similarity=0.627 Sum_probs=23.4
Q ss_pred CCceEecCCCCcCCCCCC-CCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCC
Q psy14221 405 ITGQCVCRKGVTGRTCDK-CRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLC 466 (546)
Q Consensus 405 ~~~~C~C~~G~~G~~C~~-C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C 466 (546)
...+-+|.+.|.|..|+. |.+.- .= ..+-+|+ ..+.=+|.+||+|+.|
T Consensus 15 ~~~rv~C~~nyyG~~C~~~C~~~~------------d~-~ghy~Cd-~~G~~~C~~Gw~G~~C 63 (63)
T PF01414_consen 15 YRIRVVCDENYYGPNCSKFCKPRD------------DS-FGHYTCD-SNGNKVCLPGWTGPNC 63 (63)
T ss_dssp --------TTEETTTT-EE---EE------------ET-TEEEEE--SS--EEE-TTEESTTS
T ss_pred EEEEEECCCCCCCccccCCcCCCc------------CC-cCCcccC-CCCCCCCCCCCcCCCC
Confidence 356788999999999984 33310 00 2355676 5788899999999987
No 57
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=84.70 E-value=0.47 Score=32.45 Aligned_cols=30 Identities=27% Similarity=0.551 Sum_probs=22.5
Q ss_pred CCCC--CCCCCCCcccCCccccCCceEecCCCCc
Q psy14221 385 LGCA--SCECNAVGSVNNSCDQITGQCVCRKGVT 416 (546)
Q Consensus 385 ~~C~--~~~C~~~g~c~~~c~~~~~~C~C~~G~~ 416 (546)
++|. ...|..++.|..+ ..+|+|.|++||.
T Consensus 3 dEC~~~~~~C~~~~~C~N~--~Gsy~C~C~~Gy~ 34 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCVNT--EGSYSCSCPPGYE 34 (42)
T ss_dssp STTTTTSSSSSTTSEEEEE--TTEEEEEESTTEE
T ss_pred cccCCCCCcCCCCCEEEcC--CCCEEeeCCCCcE
Confidence 3454 3457777777766 6789999999998
No 58
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=83.87 E-value=0.5 Score=31.24 Aligned_cols=27 Identities=22% Similarity=0.459 Sum_probs=18.9
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAGR 281 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G~ 281 (546)
..|+.++.|..+ ..+++|+|++||+|+
T Consensus 6 ~~C~~nA~C~~~--~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 6 GGCHPNATCTNT--GGSYTCTCKPGYEGD 32 (36)
T ss_dssp GGS-TTCEEEE---TTSEEEEE-CEEECC
T ss_pred CCCCCCcEeecC--CCCEEeECCCCCccC
Confidence 357777777664 458999999999985
No 59
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=83.40 E-value=0.51 Score=31.18 Aligned_cols=27 Identities=22% Similarity=0.517 Sum_probs=19.0
Q ss_pred CCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 342 CNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 342 ~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
..|+.+++|..+ ..++.|+|++||+|+
T Consensus 6 ~~C~~nA~C~~~--~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 6 GGCHPNATCTNT--GGSYTCTCKPGYEGD 32 (36)
T ss_dssp GGS-TTCEEEE---TTSEEEEE-CEEECC
T ss_pred CCCCCCcEeecC--CCCEEeECCCCCccC
Confidence 357788877664 458899999999986
No 60
>PF00052 Laminin_B: Laminin B (Domain IV); InterPro: IPR000034 Laminins represent a distinct family of extracellular matrix proteins present only in basement membranes in almost every animal tissue. They are heterotrimeric molecules composed of alpha, beta and gamma subunits (formerly A, B1, and B2, respectively []) and form a cruciform structure consisting of 3 short arms, each formed by a different chain, and a long arm composed of all 3 chains, [, ]. Most of the globular domains of the short arms correspond to one of two different motifs, the 200-residue laminin N-terminal (domain VI) (LN) module and the 250-residue laminin domain IV (L4) module []. All alpha chains share a unique C-terminal G domain which consists of five laminin G modules. The laminins can self-assemble, bind to other matrix macromolecules, and have unique and shared cell interactions mediated by integrins, dystroglycan, and other receptors. There are at least 14 laminin isoforms that regulate a variety of cellular functions including cell adhesion, migration, proliferation, signalling and differentiation [, , ]. The laminin B domain (also known as domain IV) is an extracellular module of unknown function. It is found in a number of different proteins that include, heparan sulphate proteoglycan from basement membrane, a laminin-like protein from Caenorhabditis elegans and laminin. Laminin IV domain is not found in short laminin chains (alpha4 or beta3).
Probab=81.90 E-value=1.2 Score=39.18 Aligned_cols=39 Identities=31% Similarity=0.515 Sum_probs=32.0
Q ss_pred CCCcccCccccCCCCcceeeeeeeccCCCCCCCCCCCceeeccC
Q psy14221 56 AGQYTGNRIGSYSLNLEFSVSWIVMRGDTSGIPTQVPDIILIMR 99 (546)
Q Consensus 56 ~~g~~G~~~~~~g~~c~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 99 (546)
++.|+||+..+||++++|++.+.. .......+++++.|+
T Consensus 5 P~~flGn~l~SYGg~L~ytl~~~~-----~~~~~~~~dViL~G~ 43 (136)
T PF00052_consen 5 PESFLGNKLTSYGGYLRYTLSYDG-----SGSSPSAPDVILEGN 43 (136)
T ss_pred ChhHcCCCceecCCeEEEEEEEec-----CCCcCCCCCEEEEeC
Confidence 357999999999999999998887 234556778888886
No 61
>KOG0196|consensus
Probab=77.63 E-value=2.9 Score=46.79 Aligned_cols=56 Identities=29% Similarity=0.670 Sum_probs=41.0
Q ss_pred CCCeeeeCCCCC----CCCCCcCCCCCcCCC--CCCCCCCCCCCCcccCCccccCCceEecCCCCcC
Q psy14221 357 HTGQCSCKPNMT----GLACDQCTEGHWGLQ--ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTG 417 (546)
Q Consensus 357 ~~~~C~C~~g~~----G~~C~~C~~g~~g~~--~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G 417 (546)
..|.|.|++||. |..|+.|++|+|-.. ...|.+||=+.+.. ....-.|.|..||.-
T Consensus 257 piG~C~C~aGye~~~~~~~C~aCp~G~yK~~~~~~~C~~CP~~S~s~-----~ega~~C~C~~gyyR 318 (996)
T KOG0196|consen 257 PIGGCVCKAGYEEAENGKACQACPPGTYKASQGDSLCLPCPPNSHSS-----SEGATSCTCENGYYR 318 (996)
T ss_pred EcCceeecCCCCcccCCCcceeCCCCcccCCCCCCCCCCCCCCCCCC-----CCCCCcccccCCccc
Confidence 458999999994 789999999999877 45677665333221 134557999999874
No 62
>PHA02887 EGF-like protein; Provisional
Probab=76.70 E-value=1.8 Score=36.32 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=23.8
Q ss_pred CCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 254 ECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 254 ~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
-|. +|.|...-+.....|.|++||+|.+|+.
T Consensus 93 YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE~ 123 (126)
T PHA02887 93 FCI-NGECMNIIDLDEKFCICNKGYTGIRCDE 123 (126)
T ss_pred Eee-CCEEEccccCCCceeECCCCcccCCCCc
Confidence 344 4566655556778999999999999985
No 63
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=76.63 E-value=2.4 Score=25.26 Aligned_cols=11 Identities=27% Similarity=0.567 Sum_probs=8.2
Q ss_pred CceEEcCCCcc
Q psy14221 269 SGQCQCKENRA 279 (546)
Q Consensus 269 ~~~C~C~~g~~ 279 (546)
+|+|+|++||.
T Consensus 1 sy~C~C~~Gy~ 11 (24)
T PF12662_consen 1 SYTCSCPPGYQ 11 (24)
T ss_pred CEEeeCCCCCc
Confidence 36788888885
No 64
>PHA02887 EGF-like protein; Provisional
Probab=75.36 E-value=2.2 Score=35.81 Aligned_cols=27 Identities=22% Similarity=0.452 Sum_probs=21.8
Q ss_pred cccCCCCccc----CCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCS----EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~----~~~~~C~C~~g~~G~~C~~ 468 (546)
.| -+|+|. .....|.|++||+|.+|+.
T Consensus 93 YC--iHG~C~yI~dL~epsCrC~~GYtG~RCE~ 123 (126)
T PHA02887 93 FC--INGECMNIIDLDEKFCICNKGYTGIRCDE 123 (126)
T ss_pred Ee--eCCEEEccccCCCceeECCCCcccCCCCc
Confidence 47 367897 3467999999999999984
No 65
>PTZ00214 high cysteine membrane protein Group 4; Provisional
Probab=73.05 E-value=1.5e+02 Score=34.34 Aligned_cols=23 Identities=35% Similarity=0.842 Sum_probs=14.3
Q ss_pred ccCCCCCcCCCCCCcCCCCcccC
Q psy14221 222 CVQCRGNTEGARCERCKPLYYGD 244 (546)
Q Consensus 222 C~~C~~g~~G~~Ce~C~~G~~g~ 244 (546)
|.+|...-....|..|.++|+..
T Consensus 364 C~tC~~~~~~~tCt~C~~gyl~~ 386 (800)
T PTZ00214 364 CATCGYNSGAVTCTRCSAGYLGV 386 (800)
T ss_pred cccccCCCCCcccccccCCcCcC
Confidence 44555433335688898888754
No 66
>KOG0196|consensus
Probab=67.05 E-value=6.9 Score=43.93 Aligned_cols=56 Identities=25% Similarity=0.644 Sum_probs=40.9
Q ss_pred CCcEEecCCCCc----CCCCCcCCCCCCccCC--CCCCCCCCCCCCCcceecCCCCCeeeeCCCCCC
Q psy14221 309 VSGTCYCQPGVT----GDRCDQCDTGYWNFTV--NGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTG 369 (546)
Q Consensus 309 ~~~~C~C~~g~~----G~~C~~C~~g~~g~~~--~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G 369 (546)
..+.|.|++||. |..|+.|++|+|.... ..|.+||=+... . ....-.|.|..||.-
T Consensus 257 piG~C~C~aGye~~~~~~~C~aCp~G~yK~~~~~~~C~~CP~~S~s----~-~ega~~C~C~~gyyR 318 (996)
T KOG0196|consen 257 PIGGCVCKAGYEEAENGKACQACPPGTYKASQGDSLCLPCPPNSHS----S-SEGATSCTCENGYYR 318 (996)
T ss_pred EcCceeecCCCCcccCCCcceeCCCCcccCCCCCCCCCCCCCCCCC----C-CCCCCcccccCCccc
Confidence 457899999996 6889999999998754 457776654433 1 234557999888864
No 67
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=65.40 E-value=3.8 Score=35.00 Aligned_cols=30 Identities=23% Similarity=0.449 Sum_probs=22.6
Q ss_pred CCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 255 CNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 255 C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
|.+ |.|...-+.....|.|..||+|.+||.
T Consensus 53 ClH-G~C~yI~dl~~~~CrC~~GYtGeRCEh 82 (139)
T PHA03099 53 CLH-GDCIHARDIDGMYCRCSHGYTGIRCQH 82 (139)
T ss_pred eEC-CEEEeeccCCCceeECCCCcccccccc
Confidence 444 355554456778999999999999985
No 68
>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane
Probab=51.89 E-value=12 Score=24.24 Aligned_cols=20 Identities=35% Similarity=0.780 Sum_probs=13.7
Q ss_pred cCCcccc-CCceEecCCCCcC
Q psy14221 398 VNNSCDQ-ITGQCVCRKGVTG 417 (546)
Q Consensus 398 c~~~c~~-~~~~C~C~~G~~G 417 (546)
|.+.|++ ..++|.|++||.-
T Consensus 8 CpA~CDpn~~~~C~CPeGyIl 28 (34)
T PF09064_consen 8 CPADCDPNSPGQCFCPEGYIL 28 (34)
T ss_pred CCCccCCCCCCceeCCCceEe
Confidence 3345554 3579999999963
No 69
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=51.25 E-value=8.1 Score=25.49 Aligned_cols=13 Identities=38% Similarity=0.820 Sum_probs=10.2
Q ss_pred CCCCeEeCCCCCc
Q psy14221 450 EESGQCVCPPLTR 462 (546)
Q Consensus 450 ~~~~~C~C~~g~~ 462 (546)
+.+++|.|++||+
T Consensus 16 ~g~~~C~C~~Gy~ 28 (36)
T PF14670_consen 16 PGSYRCSCPPGYK 28 (36)
T ss_dssp TTSEEEE-STTEE
T ss_pred CCceEeECCCCCE
Confidence 5678999999986
No 70
>KOG3607|consensus
Probab=48.83 E-value=18 Score=40.95 Aligned_cols=27 Identities=26% Similarity=0.646 Sum_probs=23.9
Q ss_pred cccCCCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
.| +.+|+|+ ....|.|.+||.++.|++
T Consensus 631 ~C-~g~GVCn-n~~~ChC~~gwapp~C~~ 657 (716)
T KOG3607|consen 631 TC-NGHGVCN-NELNCHCEPGWAPPFCFI 657 (716)
T ss_pred cc-CCCcccC-CCcceeeCCCCCCCcccc
Confidence 37 7899998 678999999999999986
No 71
>KOG3516|consensus
Probab=40.57 E-value=24 Score=41.35 Aligned_cols=41 Identities=27% Similarity=0.601 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecC-CCCcCCCCCc
Q psy14221 282 TCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQ-PGVTGDRCDQ 326 (546)
Q Consensus 282 ~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~-~g~~G~~C~~ 326 (546)
.|.+...|.+++|.++|.|+. ....+.|.|. .||.|..|..
T Consensus 541 ~C~i~drClPN~CehgG~C~Q----s~~~f~C~C~~TGY~GatCHt 582 (1306)
T KOG3516|consen 541 MCGISDRCLPNPCEHGGKCSQ----SWDDFECNCELTGYKGATCHT 582 (1306)
T ss_pred ccccccccCCccccCCCcccc----cccceeEeccccccccccccC
Confidence 455667799999999999943 4488999998 8999999974
No 72
>KOG3516|consensus
Probab=32.82 E-value=33 Score=40.31 Aligned_cols=38 Identities=24% Similarity=0.579 Sum_probs=32.8
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcC-CCccCCCCCC
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCK-ENRAGRTCNL 285 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~g~~G~~C~~ 285 (546)
.++.|.|++|.++|.|.. ....+.|.|. .||.|..|..
T Consensus 544 i~drClPN~CehgG~C~Q--s~~~f~C~C~~TGY~GatCHt 582 (1306)
T KOG3516|consen 544 ISDRCLPNPCEHGGKCSQ--SWDDFECNCELTGYKGATCHT 582 (1306)
T ss_pred cccccCCccccCCCcccc--cccceeEeccccccccccccC
Confidence 456789999999999976 4778999998 8999999983
No 73
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function. It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO
Probab=32.53 E-value=45 Score=23.60 Aligned_cols=12 Identities=50% Similarity=1.245 Sum_probs=10.1
Q ss_pred CCcEEecCCCCc
Q psy14221 309 VSGTCYCQPGVT 320 (546)
Q Consensus 309 ~~~~C~C~~g~~ 320 (546)
..++|.|++||.
T Consensus 35 ~~g~C~C~~g~~ 46 (52)
T PF01683_consen 35 VNGRCQCPPGYV 46 (52)
T ss_pred cCCEeECCCCCE
Confidence 678999999985
No 74
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=31.65 E-value=70 Score=26.64 Aligned_cols=22 Identities=23% Similarity=0.602 Sum_probs=14.0
Q ss_pred cccCCCCcccCC-------CCeEeCCCCCc
Q psy14221 440 SCEQSGMVCSEE-------SGQCVCPPLTR 462 (546)
Q Consensus 440 ~C~~~~g~C~~~-------~~~C~C~~g~~ 462 (546)
.| ++||.|... =+.|.|.+.+.
T Consensus 14 ~C-sgHG~C~~~~~~~~~~C~~C~C~~T~~ 42 (103)
T PF12955_consen 14 NC-SGHGSCVKKYGSGGGDCFACKCKPTVV 42 (103)
T ss_pred CC-CCCceEeeccCCCccceEEEEeecccc
Confidence 47 788888721 25788877443
No 75
>KOG3514|consensus
Probab=26.92 E-value=45 Score=38.75 Aligned_cols=35 Identities=26% Similarity=0.516 Sum_probs=29.0
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCcEEecC-CCCcCCCCCc
Q psy14221 288 DCPPCDCDPLGTLSVPQPCHPVSGTCYCQ-PGVTGDRCDQ 326 (546)
Q Consensus 288 ~C~~~~C~~~g~c~~~~~C~~~~~~C~C~-~g~~G~~C~~ 326 (546)
.|.++||.|+|+|...- ..+.|.|. .+|.|+.|++
T Consensus 625 ~C~~nPC~N~g~C~egw----NrfiCDCs~T~~~G~~Cer 660 (1591)
T KOG3514|consen 625 ICESNPCQNGGKCSEGW----NRFICDCSGTGFEGRTCER 660 (1591)
T ss_pred ccCCCcccCCCCccccc----cccccccccCcccCccccc
Confidence 58899999999994432 77889997 6899999985
No 76
>cd00185 TNFR Tumor necrosis factor receptor (TNFR) domain; superfamily of TNF-like receptor domains. When bound to TNF-like cytokines, TNFRs trigger multiple signal transduction pathways, they are involved in inflammation response, apoptosis, autoimmunity and organogenesis. TNFRs domains are elongated with generally three tandem repeats of cysteine-rich domains (CRDs). They fit in the grooves between protomers within the ligand trimer. Some TNFRs, such as NGFR and HveA, bind ligands with no structural similarity to TNF and do not bind ligand trimers.
Probab=23.89 E-value=2.2e+02 Score=23.21 Aligned_cols=47 Identities=28% Similarity=0.621 Sum_probs=22.6
Q ss_pred CCCcCCCCcccCCC--CCCCccC-CCCCCCCcccccc-CCCceEEcCCCcc
Q psy14221 233 RCERCKPLYYGDPR--TGDCKPC-ECNTSGSLGDECD-SISGQCQCKENRA 279 (546)
Q Consensus 233 ~Ce~C~~G~~g~~~--~~~C~~~-~C~~~g~c~~~c~-~~~~~C~C~~g~~ 279 (546)
.|..|++|+|-+.. ...|.++ .|..+-.-...|. ..+-+|.|++||.
T Consensus 34 ~C~~C~~g~ys~~~~~~~~C~~c~~C~~g~~~~~~ct~t~dt~C~C~~G~y 84 (98)
T cd00185 34 VCEPCPPGTYTDSWNHLPKCLSCRTCDSGLVEKAPCTATRNTVCGCKPGFY 84 (98)
T ss_pred eecCCCCCCcccCCCCCCcCCcCccCCCCCEEEccCCCCCCCeEeCCCCCE
Confidence 45556777665432 1234333 2332211111222 2346899999986
No 77
>KOG3514|consensus
Probab=22.54 E-value=57 Score=37.99 Aligned_cols=35 Identities=26% Similarity=0.584 Sum_probs=30.6
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcC-CCccCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCK-ENRAGRTCN 284 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~g~~G~~C~ 284 (546)
..|.++||.|+|.|.. ..+.+.|.|. .+|.|+.||
T Consensus 624 ~~C~~nPC~N~g~C~e--gwNrfiCDCs~T~~~G~~Ce 659 (1591)
T KOG3514|consen 624 KICESNPCQNGGKCSE--GWNRFICDCSGTGFEGRTCE 659 (1591)
T ss_pred cccCCCcccCCCCccc--cccccccccccCcccCcccc
Confidence 3688999999999977 4788999996 699999999
No 78
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A.
Probab=22.19 E-value=23 Score=25.59 Aligned_cols=14 Identities=43% Similarity=0.980 Sum_probs=5.3
Q ss_pred eeecCCCccCCCCC
Q psy14221 149 QCNCRIGITGRDCS 162 (546)
Q Consensus 149 ~C~C~~G~~G~~C~ 162 (546)
.|.|..-|.|++|+
T Consensus 37 ~CECn~Cy~GpdCS 50 (56)
T PF04863_consen 37 VCECNSCYGGPDCS 50 (56)
T ss_dssp --EE-TTEESTTS-
T ss_pred cccccCCcCCCCcc
Confidence 45555555555544
Done!