Query psy14221
Match_columns 546
No_of_seqs 441 out of 3224
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 22:30:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aqs_A Laminin subunit beta-1; 99.9 1.2E-22 4.2E-27 219.4 9.9 222 171-422 277-525 (525)
2 4aqs_A Laminin subunit beta-1; 99.8 7.6E-21 2.6E-25 205.4 8.2 232 7-284 276-524 (525)
3 1klo_A Laminin; glycoprotein; 99.8 1.7E-19 5.7E-24 163.7 4.5 138 292-431 1-155 (162)
4 1klo_A Laminin; glycoprotein; 99.7 6.9E-19 2.4E-23 159.6 5.2 140 342-483 1-161 (162)
5 2ygq_A WIF-1, WNT inhibitory f 99.7 3.8E-18 1.3E-22 172.1 7.7 159 253-471 153-311 (324)
6 4fbr_A Lectin, myxobacterial h 99.7 1.3E-21 4.3E-26 188.3 -20.2 205 166-464 44-265 (267)
7 2ygq_A WIF-1, WNT inhibitory f 99.7 1.6E-17 5.6E-22 167.5 7.0 157 197-423 153-309 (324)
8 3fcs_B Integrin beta-3; beta p 99.6 5.3E-16 1.8E-20 169.9 11.8 167 249-467 436-627 (690)
9 2vj2_A Jagged-1; signalling, p 99.6 9.6E-17 3.3E-21 146.9 4.2 150 268-468 15-169 (169)
10 2vj2_A Jagged-1; signalling, p 99.6 1.1E-16 3.8E-21 146.4 2.7 149 172-373 16-168 (169)
11 3fcs_B Integrin beta-3; beta p 99.6 1E-15 3.4E-20 167.7 10.2 177 193-422 436-628 (690)
12 2gy5_A Angiopoietin-1 receptor 99.6 5.7E-16 1.9E-20 161.6 7.7 163 172-422 184-350 (423)
13 2gy5_A Angiopoietin-1 receptor 99.6 7.1E-16 2.4E-20 160.9 8.0 162 269-468 184-350 (423)
14 2vj3_A Neurogenic locus notch 99.5 4.8E-15 1.6E-19 130.4 7.2 113 246-374 4-119 (135)
15 2vj3_A Neurogenic locus notch 99.5 1.3E-14 4.6E-19 127.5 7.1 115 284-422 3-119 (135)
16 4d90_A EGF-like repeat and dis 99.5 1.9E-14 6.6E-19 127.8 6.7 116 249-374 2-133 (143)
17 3k6s_B Integrin beta-2; cell r 99.5 2E-14 6.7E-19 157.0 6.2 167 195-421 433-619 (687)
18 4fbr_A Lectin, myxobacterial h 99.5 4.2E-18 1.4E-22 163.8 -20.2 183 171-422 11-202 (267)
19 3k6s_B Integrin beta-2; cell r 99.5 3.1E-14 1.1E-18 155.4 7.0 162 252-471 434-627 (687)
20 1z1y_A Ookinete surface protei 99.4 1.7E-15 5.9E-20 140.9 -4.2 151 251-422 9-175 (186)
21 4d90_A EGF-like repeat and dis 99.4 7.3E-13 2.5E-17 117.6 8.9 122 337-468 1-133 (143)
22 1z1y_A Ookinete surface protei 99.4 1.5E-14 5.2E-19 134.5 -4.2 148 195-374 9-175 (186)
23 1tpg_A T-plasminogen activator 99.1 4.2E-11 1.4E-15 97.3 3.1 85 269-374 1-86 (91)
24 1yo8_A Thrombospondin-2; EGF, 99.0 2.9E-10 9.9E-15 122.8 7.2 122 246-374 2-146 (634)
25 1tpg_A T-plasminogen activator 99.0 1.3E-10 4.4E-15 94.4 3.1 86 310-422 1-86 (91)
26 2bou_A EGF-like module contain 99.0 1.1E-10 3.8E-15 103.4 1.9 110 253-373 7-133 (143)
27 2bou_A EGF-like module contain 98.9 4.8E-10 1.7E-14 99.2 2.4 110 292-421 7-133 (143)
28 1yo8_A Thrombospondin-2; EGF, 98.9 2.2E-09 7.5E-14 116.0 7.1 122 287-422 4-146 (634)
29 2p28_B Integrin beta-2; hybrid 98.7 3.1E-09 1E-13 100.2 2.2 95 252-374 95-214 (217)
30 4aqt_A Laminin subunit gamma-1 98.7 7.7E-09 2.6E-13 105.2 4.8 97 389-486 254-368 (375)
31 2p28_B Integrin beta-2; hybrid 98.6 1.2E-08 4.2E-13 96.1 3.2 102 292-422 96-214 (217)
32 2y38_A Laminin subunit alpha-5 98.6 3.1E-08 1.1E-12 101.1 6.0 75 309-383 284-382 (403)
33 4aqt_A Laminin subunit gamma-1 98.6 1.7E-08 5.9E-13 102.7 3.6 98 341-438 254-367 (375)
34 1uzk_A Fibrillin-1; glycoprote 98.6 1.8E-09 6.1E-14 97.7 -3.5 120 246-371 2-156 (162)
35 1dx5_I Thrombomodulin; serine 98.5 7.5E-09 2.6E-13 88.3 -0.6 102 246-370 3-111 (118)
36 2y38_A Laminin subunit alpha-5 98.5 9.7E-08 3.3E-12 97.5 5.8 82 174-256 287-393 (403)
37 2w86_A Fibrillin-1, fibrillin1 98.4 3.9E-09 1.3E-13 93.8 -4.9 131 246-419 3-141 (147)
38 1uzk_A Fibrillin-1; glycoprote 98.4 2.5E-08 8.4E-13 90.1 -0.9 117 335-465 2-156 (162)
39 3zyj_B Netrin-G1; cell adhesio 98.3 1.4E-07 4.7E-12 96.7 2.6 121 205-366 294-419 (426)
40 1dx5_I Thrombomodulin; serine 98.3 5.8E-08 2E-12 82.7 -1.7 104 190-322 3-111 (118)
41 2c4f_L Coagulation factor VII 98.2 4.1E-07 1.4E-11 80.1 1.5 76 335-422 46-129 (142)
42 2w86_A Fibrillin-1, fibrillin1 98.2 1.3E-07 4.6E-12 83.8 -1.8 125 124-282 3-141 (147)
43 3zyj_B Netrin-G1; cell adhesio 98.1 4.8E-07 1.7E-11 92.7 1.9 97 172-301 312-408 (426)
44 1emn_A Fibrillin; extracellula 98.1 1.3E-06 4.5E-11 69.0 4.0 72 283-371 2-77 (82)
45 2c4f_L Coagulation factor VII 98.1 4.5E-07 1.5E-11 79.8 1.3 75 246-326 46-129 (142)
46 1x7a_L Coagulation factor IX, 98.1 1E-06 3.4E-11 77.9 3.2 73 246-326 47-126 (146)
47 1x7a_L Coagulation factor IX, 98.1 1.3E-06 4.5E-11 77.1 3.7 73 335-422 47-126 (146)
48 1emn_A Fibrillin; extracellula 98.1 1.2E-06 4.2E-11 69.2 3.0 70 246-323 4-77 (82)
49 1aut_L Activated protein C; se 98.0 1.8E-06 6.2E-11 72.9 3.0 68 247-322 6-86 (114)
50 1nfu_B Coagulation factor XA, 98.0 1.1E-06 3.9E-11 81.0 0.2 77 282-374 38-121 (195)
51 1z6c_A Vitamin K-dependent pro 97.9 2.8E-06 9.5E-11 68.0 2.2 70 247-326 3-78 (87)
52 1aut_L Activated protein C; se 97.9 5.7E-06 1.9E-10 69.8 4.0 70 287-370 7-86 (114)
53 2vh0_B Activated factor XA lig 97.9 1.4E-06 4.8E-11 75.8 0.2 77 282-374 38-121 (134)
54 2wg3_C Hedgehog-interacting pr 97.9 2E-06 6.9E-11 90.7 0.5 78 312-422 378-455 (463)
55 3u7u_G Neuregulin 1; signaling 97.9 6.2E-06 2.1E-10 59.4 2.9 40 335-374 7-49 (55)
56 3u7u_G Neuregulin 1; signaling 97.9 6.3E-06 2.2E-10 59.3 2.9 41 246-286 7-50 (55)
57 1nfu_B Coagulation factor XA, 97.9 1.8E-06 6.3E-11 79.7 -0.1 74 335-422 41-121 (195)
58 2wg3_C Hedgehog-interacting pr 97.8 2.6E-06 8.9E-11 89.9 0.6 78 360-468 378-455 (463)
59 1z6c_A Vitamin K-dependent pro 97.8 7.1E-06 2.4E-10 65.6 2.8 70 335-421 2-77 (87)
60 2vh0_B Activated factor XA lig 97.8 2.4E-06 8E-11 74.4 -0.1 74 335-422 41-121 (134)
61 1lmj_A Fibrillin 1; EGF, calci 97.8 6.2E-06 2.1E-10 65.7 1.3 69 335-418 2-79 (86)
62 3h5c_B Vitamin K-dependent pro 97.7 2.6E-05 8.8E-10 78.1 6.1 68 287-370 6-76 (317)
63 1n7d_A LDL receptor, low-densi 97.7 0.0017 5.7E-08 72.2 20.8 123 268-418 230-365 (699)
64 1lmj_A Fibrillin 1; EGF, calci 97.7 5E-06 1.7E-10 66.3 0.0 69 246-322 2-79 (86)
65 1n7d_A LDL receptor, low-densi 97.7 0.003 1E-07 70.1 22.3 162 166-370 186-365 (699)
66 3h5c_B Vitamin K-dependent pro 97.7 3.9E-05 1.3E-09 76.8 5.7 69 246-322 4-76 (317)
67 1edm_B Factor IX; epidermal gr 97.6 5.1E-05 1.7E-09 50.5 3.4 37 335-373 2-38 (39)
68 1edm_B Factor IX; epidermal gr 97.4 7.6E-05 2.6E-09 49.6 2.7 37 246-284 2-38 (39)
69 2w2n_E LDL receptor, low-densi 97.3 5.5E-05 1.9E-09 62.8 1.1 51 267-323 47-101 (107)
70 2w2n_E LDL receptor, low-densi 97.2 6.4E-05 2.2E-09 62.4 0.9 77 315-418 18-100 (107)
71 1k36_A Epiregulin; EGF-like fo 97.0 0.0002 7E-09 49.4 1.7 38 248-286 4-44 (46)
72 1egf_A Epidermal growth factor 97.0 0.00035 1.2E-08 49.9 2.8 40 247-286 3-45 (53)
73 1k36_A Epiregulin; EGF-like fo 97.0 0.00028 9.4E-09 48.8 2.2 38 336-374 3-43 (46)
74 3m0c_C LDL receptor, low-densi 97.0 0.00052 1.8E-08 77.1 5.5 116 224-369 257-382 (791)
75 1a3p_A Epidermal growth factor 97.0 0.00042 1.4E-08 47.6 2.9 37 249-285 2-41 (45)
76 3ca7_A Protein spitz; argos, E 96.9 4.9E-05 1.7E-09 54.2 -2.6 46 270-326 3-48 (52)
77 1egf_A Epidermal growth factor 96.9 0.001 3.6E-08 47.3 4.2 40 335-374 2-44 (53)
78 1a3p_A Epidermal growth factor 96.8 0.00066 2.3E-08 46.6 2.7 37 338-374 2-41 (45)
79 2k2s_B Micronemal protein 6; m 96.6 0.00021 7E-09 52.5 -1.1 42 246-289 10-54 (61)
80 3m0c_C LDL receptor, low-densi 96.6 0.0022 7.6E-08 72.0 6.3 67 249-321 309-382 (791)
81 3ca7_A Protein spitz; argos, E 96.5 0.00019 6.5E-09 51.1 -1.8 28 440-468 15-48 (52)
82 1hae_A Heregulin-alpha; growth 96.4 0.00045 1.5E-08 51.2 -0.3 38 289-326 9-47 (63)
83 2k2s_B Micronemal protein 6; m 96.2 0.00052 1.8E-08 50.4 -0.9 38 335-374 10-50 (61)
84 1hae_A Heregulin-alpha; growth 96.2 0.00097 3.3E-08 49.4 0.6 39 248-286 7-48 (63)
85 3p5b_L Low density lipoprotein 95.9 0.004 1.4E-07 64.2 3.9 66 249-322 2-71 (400)
86 1nql_B Epidermal growth factor 95.9 0.0022 7.4E-08 45.6 1.2 34 252-285 11-44 (53)
87 3p5b_L Low density lipoprotein 95.9 0.0046 1.6E-07 63.7 3.9 66 338-418 2-71 (400)
88 3v65_B Low-density lipoprotein 95.5 0.0028 9.6E-08 65.0 0.6 72 335-421 2-82 (386)
89 1nql_B Epidermal growth factor 95.4 0.0032 1.1E-07 44.8 0.6 34 389-422 11-44 (53)
90 3v65_B Low-density lipoprotein 95.3 0.0032 1.1E-07 64.6 0.3 54 267-326 21-83 (386)
91 2fd6_A Urokinase-type plasmino 95.2 0.011 3.7E-07 50.0 3.1 61 254-326 2-63 (122)
92 2fd6_A Urokinase-type plasmino 94.9 0.015 5.1E-07 49.2 3.2 61 391-468 2-63 (122)
93 3ltf_D Protein spitz; receptor 94.4 0.0092 3.2E-07 43.2 0.6 32 254-285 15-48 (58)
94 3ltf_D Protein spitz; receptor 94.3 0.0097 3.3E-07 43.1 0.5 32 391-422 15-48 (58)
95 1g1s_A P-selectin; selectin, l 93.6 0.017 5.8E-07 51.2 0.9 42 248-291 120-161 (162)
96 2ygo_A WIF-1, WNT inhibitory f 93.2 0.053 1.8E-06 48.7 3.5 27 440-468 154-180 (188)
97 1g1s_A P-selectin; selectin, l 91.2 0.044 1.5E-06 48.4 0.4 35 288-326 121-155 (162)
98 3e50_C Protransforming growth 90.7 0.12 4.2E-06 35.9 2.2 33 253-286 14-46 (50)
99 1iox_A Betacellulin; EGF-like 90.7 0.1 3.4E-06 36.4 1.7 32 253-285 14-45 (50)
100 2i9a_A Urokinase-type plasmino 89.6 0.19 6.4E-06 43.7 3.0 62 291-373 12-74 (145)
101 1xdt_R Hbegf, heparin-binding 89.6 0.15 5.2E-06 39.0 2.0 33 252-285 45-77 (79)
102 2ygo_A WIF-1, WNT inhibitory f 89.5 0.23 7.8E-06 44.6 3.5 29 133-162 151-179 (188)
103 3nt1_A Prostaglandin-endoperox 89.0 0.15 5E-06 54.7 2.2 37 337-374 2-39 (587)
104 3e50_C Protransforming growth 88.7 0.21 7.2E-06 34.7 2.1 32 390-422 14-45 (50)
105 1iox_A Betacellulin; EGF-like 88.2 0.15 5E-06 35.5 1.0 32 390-422 14-45 (50)
106 3nt1_A Prostaglandin-endoperox 88.2 0.18 6.1E-06 54.1 2.2 36 248-284 2-38 (587)
107 2p26_A Integrin beta-2; hybrid 88.0 0.27 9.1E-06 47.6 3.1 58 406-467 206-274 (280)
108 1q4g_A Prostaglandin G/H synth 87.8 0.18 6E-06 53.9 1.8 38 247-285 2-40 (553)
109 2i9a_A Urokinase-type plasmino 87.5 0.34 1.2E-05 42.0 3.2 63 389-468 12-75 (145)
110 2rnl_A Amphiregulin; AR, color 87.3 0.31 1.1E-05 33.8 2.2 32 253-285 18-49 (50)
111 2rnl_A Amphiregulin; AR, color 86.9 0.31 1.1E-05 33.8 2.1 27 440-468 19-49 (50)
112 1xdt_R Hbegf, heparin-binding 86.9 0.31 1.1E-05 37.2 2.3 33 389-422 45-77 (79)
113 1q4g_A Prostaglandin G/H synth 86.9 0.19 6.4E-06 53.7 1.4 38 384-422 2-40 (553)
114 2e26_A Reelin, reeler protein; 86.4 0.074 2.5E-06 57.7 -2.1 45 273-326 521-565 (725)
115 3cfw_A L-selectin; EGF, cell a 86.1 0.29 9.9E-06 43.1 2.0 40 249-290 121-160 (164)
116 2p26_A Integrin beta-2; hybrid 85.8 0.38 1.3E-05 46.5 2.8 57 255-325 198-274 (280)
117 3fl7_A Ephrin receptor; ATP-bi 84.4 0.31 1E-05 51.9 1.6 66 344-418 252-321 (536)
118 2e26_A Reelin, reeler protein; 81.0 0.23 8E-06 53.8 -0.9 44 100-162 521-564 (725)
119 2hey_R Tumor necrosis factor r 78.5 0.93 3.2E-05 39.2 2.2 56 434-489 56-125 (146)
120 1g1t_A E-selectin; EGF, adhesi 77.3 0.62 2.1E-05 40.5 0.7 36 248-285 120-155 (157)
121 3fl7_A Ephrin receptor; ATP-bi 77.2 0.76 2.6E-05 48.9 1.5 57 309-370 261-321 (536)
122 3tbd_A Netrin-G2, laminet-2; l 75.5 0.83 2.8E-05 45.2 1.2 38 207-245 269-310 (338)
123 1apq_A Complement protease C1R 75.4 1.2 4.2E-05 30.8 1.8 25 342-370 20-44 (53)
124 3cfw_A L-selectin; EGF, cell a 75.2 1.2 3.9E-05 39.1 2.0 34 387-422 122-155 (164)
125 1ob1_C Major merozoite surface 73.0 1.3 4.6E-05 35.2 1.6 70 250-320 7-83 (99)
126 1g1t_A E-selectin; EGF, adhesi 73.0 0.83 2.8E-05 39.6 0.4 34 387-422 122-155 (157)
127 1ob1_C Major merozoite surface 69.5 4.2 0.00014 32.4 3.7 52 309-368 24-83 (99)
128 3urf_Z Tumor necrosis factor r 68.3 2 6.7E-05 38.3 1.8 52 107-158 38-92 (171)
129 3asi_A Neurexin-1-alpha; beta- 68.1 2.5 8.7E-05 43.0 2.9 36 248-285 186-222 (410)
130 1apq_A Complement protease C1R 67.9 2 7E-05 29.6 1.5 15 267-281 30-44 (53)
131 3k51_B Decoy receptor 3; DCR3, 65.1 2.8 9.4E-05 37.5 2.1 51 107-157 40-93 (176)
132 1gl4_A Nidogen-1, entactin; im 63.1 1.5 5E-05 42.3 -0.1 34 335-370 4-39 (285)
133 3asi_A Neurexin-1-alpha; beta- 61.8 3.5 0.00012 42.0 2.5 36 385-422 186-222 (410)
134 3urf_Z Tumor necrosis factor r 61.3 3.4 0.00012 36.7 1.9 11 406-416 81-91 (171)
135 3u3p_A Tumor necrosis factor r 58.9 4.5 0.00015 39.4 2.5 51 107-157 44-97 (313)
136 3tbd_A Netrin-G2, laminet-2; l 56.5 3 0.0001 41.1 0.8 28 9-36 285-312 (338)
137 1gl4_A Nidogen-1, entactin; im 55.2 2.6 8.8E-05 40.6 0.1 34 246-281 4-39 (285)
138 2kl7_A Fibulin-4; secreted, ca 54.9 3.8 0.00013 30.5 1.0 33 335-369 2-37 (71)
139 3k51_B Decoy receptor 3; DCR3, 49.9 6.8 0.00023 34.9 2.0 27 463-489 120-149 (176)
140 1n1i_A Merozoite surface prote 49.7 14 0.00047 29.6 3.5 68 248-320 11-84 (105)
141 2uwi_A CRME protein; receptor, 47.7 3.3 0.00011 35.5 -0.5 11 406-416 78-88 (142)
142 1n1i_A Merozoite surface prote 47.4 15 0.00053 29.3 3.4 50 309-368 30-84 (105)
143 2kl7_A Fibulin-4; secreted, ca 47.2 6.8 0.00023 29.1 1.3 21 225-245 19-39 (71)
144 3qcw_A Neurexin-1-alpha; synap 46.9 8.1 0.00028 45.5 2.6 36 248-285 1018-1054(1245)
145 3qd6_R CD40L receptor, tumor n 45.3 19 0.00064 31.9 4.2 28 461-488 118-148 (177)
146 1sg1_X Tumor necrosis factor r 45.1 8.7 0.0003 33.5 1.9 52 107-158 33-87 (161)
147 3qcw_A Neurexin-1-alpha; synap 42.8 10 0.00034 44.7 2.5 36 385-422 1018-1054(1245)
148 1szb_A Mannose binding lectin- 35.1 5.4 0.00018 35.0 -1.1 13 356-368 145-157 (170)
149 2bz6_L Blood coagulation facto 32.9 11 0.00036 26.2 0.3 20 269-288 20-43 (53)
150 1kig_L Factor XA; glycoprotein 32.3 25 0.00085 24.0 2.2 10 269-278 18-27 (51)
151 2jkh_L Factor X light chain; p 31.9 13 0.00044 25.9 0.6 21 267-287 19-43 (55)
152 3me4_A Tumor necrosis factor r 28.6 27 0.00091 32.1 2.4 12 20-31 43-54 (216)
153 4fhq_A Tumor necrosis factor r 20.5 33 0.0011 28.9 1.2 15 107-121 36-50 (134)
154 1jma_B Herpesvirus entry media 20.2 47 0.0016 28.9 2.2 13 369-381 13-25 (167)
155 3tje_F Tumor necrosis factor r 20.1 36 0.0012 29.4 1.4 29 434-462 84-118 (156)
No 1
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.87 E-value=1.2e-22 Score=219.43 Aligned_cols=222 Identities=36% Similarity=0.883 Sum_probs=119.9
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCceeCCCC--CCCcC-----------CCCCcccCCCCCcCCC
Q psy14221 171 TSRGCASCEDGYIGDHCESCDAGYYGNPTELG-----GSCVPCSCG--GGPCD-----------ASTGECVQCRGNTEGA 232 (546)
Q Consensus 171 ~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~-----g~C~~C~C~--~~~C~-----------~~~g~C~~C~~g~~G~ 232 (546)
..+.| .|++||+|.+|+++++++++.|+... ..+..|.|+ ...|+ ...+.|..|.++|.|.
T Consensus 277 ~~g~C-~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~ 355 (525)
T 4aqs_A 277 VHGHC-MCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR 355 (525)
T ss_dssp CCCEE-CCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEEST
T ss_pred cCccc-cCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCC
Confidence 45677 89999999999998999988887532 223345555 22332 2345666799999999
Q ss_pred CCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCCCc--cCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCC
Q psy14221 233 RCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKENR--AGRTCNLALDCPPCDCDPLGTLSVPQPCHPVS 310 (546)
Q Consensus 233 ~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~--~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~ 310 (546)
+|++|.++|++......-. ......|.|...+ .+..|+.... ..+....
T Consensus 356 ~Ce~C~~g~~~~~~~~~~~--------------~~~~~~C~C~~~~~~~~~~C~~~~~---------------~~~~~~~ 406 (525)
T 4aqs_A 356 NCEQCKPFYFQHPERDIRD--------------PNLCEPCTCDPAGSENGGICDGYTD---------------FSVGLIA 406 (525)
T ss_dssp TSCEECTTEEECSSSCTTC--------------TTCEEECCCCTTTBSGGGCCCCSCB---------------GGGTBCS
T ss_pred CcccccCcccccCCCCCCC--------------CCCCcCCCCCCCCCCCCccccCCCC---------------CCcCCCC
Confidence 9999999999875221000 0011233443332 3333332110 0122356
Q ss_pred cEEecCCCCcCCCCCcCCCCCCccCC---CCCCCCCCCCCCCcc--eecCCCCCeeeeCCCCCCCCCCcCCCCCcCCC--
Q psy14221 311 GTCYCQPGVTGDRCDQCDTGYWNFTV---NGCTSCNCNRDGSLH--FSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQ-- 383 (546)
Q Consensus 311 ~~C~C~~g~~G~~C~~C~~g~~g~~~---~~C~~~~C~~~g~c~--~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~-- 383 (546)
+.|.|.++|.|.+|++|++||++... ..|.+++|++.+++. ..|+..+++|.|++||+|.+|++|++|||+..
T Consensus 407 ~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~ 486 (525)
T 4aqs_A 407 GQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSND 486 (525)
T ss_dssp SCCCBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-----------
T ss_pred CccCCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCC
Confidence 77899999999999999999998753 468888999888774 46777889999999999999999999999976
Q ss_pred CCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 384 ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 384 ~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
++.|.+++|++++++...|+..+++|.|++||+|.+|++
T Consensus 487 ~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 487 LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ---------------------------------------
T ss_pred CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 677999999999999999998899999999999999974
No 2
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.82 E-value=7.6e-21 Score=205.36 Aligned_cols=232 Identities=29% Similarity=0.690 Sum_probs=104.9
Q ss_pred cccceeecCCCCCCCCCCCCCCCCCCCCCC-----CCCCCcCCCCCCCCCCcCCCCCcccCccccCCCCcceeeeeeecc
Q psy14221 7 VINVDLVHSSNVEGRQCDQCRPGSFSLSAD-----NLAGCTPCFCFNRSTHCTEAGQYTGNRIGSYSLNLEFSVSWIVMR 81 (546)
Q Consensus 7 ~~~~~C~C~~~~~G~~C~~C~~g~~~~~~~-----~~~~C~~~~C~~~s~~C~c~~g~~G~~~~~~g~~c~~~~~~~~~~ 81 (546)
.++++|.|++||.|.+||+|.++|++..+. +...+..+.|++++..|. +.. ..
T Consensus 276 ~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~------------------~d~----~~ 333 (525)
T 4aqs_A 276 MVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCH------------------FDM----AV 333 (525)
T ss_dssp CCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEE------------------ECH----HH
T ss_pred CcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCC------------------CCc----cc
Confidence 467899999999999999999999886543 122222233332222222 111 00
Q ss_pred CCCCCCCCCCCceeeccCCCCCCCCCCCCcCCCCCccCCCCCC---CCCCccCCCCCCCCCCCcccCCCCeeecCCCccC
Q psy14221 82 GDTSGIPTQVPDIILIMRVREPGYTGPLCDRCAYGYFGFPSQP---NGSCEPCNCSPYGSVSDECHEESGQCNCRIGITG 158 (546)
Q Consensus 82 ~~~~~~~~~~~~~~~~g~~C~~g~~G~~C~~C~~g~~~~~~~~---~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G 158 (546)
. .........++. .|.++|+|..|+.|.++|++..... ...+.++.|... ..+.+
T Consensus 334 c--~~~~~~~gg~C~---~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~-----------------~~~~~ 391 (525)
T 4aqs_A 334 F--LATGNVSGGVCD---NCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPA-----------------GSENG 391 (525)
T ss_dssp H--HHTTSSCCEEEE---SCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTT-----------------TBSGG
T ss_pred c--cccCccCCCccc---CCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCC-----------------CCCCC
Confidence 0 111122222222 7999999999999999999875221 112223333321 11112
Q ss_pred CCCCcCC-CccccCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCC-------CCCcCCCCCcccCCCCCcC
Q psy14221 159 RDCSQCE-PRHILTSRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCG-------GGPCDASTGECVQCRGNTE 230 (546)
Q Consensus 159 ~~C~~C~-~~C~~~~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~-------~~~C~~~~g~C~~C~~g~~ 230 (546)
..|+... ..+......| .|.++|.|..|+++.+++++.++.+...|.+|.|+ ...|+..++.|+ |+++|.
T Consensus 392 ~~C~~~~~~~~~~~~~~C-~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~-C~~g~~ 469 (525)
T 4aqs_A 392 GICDGYTDFSVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCY-CKRLVT 469 (525)
T ss_dssp GCCCCSCBGGGTBCSSCC-CBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBC-BCTTCC
T ss_pred ccccCCCCCCcCCCCCcc-CCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEE-CCCCCc
Confidence 2222100 1111133445 55666666666555566655555555556666554 457888899996 999999
Q ss_pred CCCCCcCCCCcccCC-CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCC
Q psy14221 231 GARCERCKPLYYGDP-RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCN 284 (546)
Q Consensus 231 G~~Ce~C~~G~~g~~-~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~ 284 (546)
|.+|++|.+||++.. .++.|.+++|++++++...|+..+++|+|++||+|.+|+
T Consensus 470 G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 470 GQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp STTTCC-------------------------------------------------
T ss_pred CCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 999999999999976 567799999999999998888888999999999999986
No 3
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.76 E-value=1.7e-19 Score=163.72 Aligned_cols=138 Identities=36% Similarity=0.891 Sum_probs=113.6
Q ss_pred CCCCCCCCCCCCCCCcCCCcEE-ecCCCCcCCCCCcCCCCCCccCC------CCCCCCCCCCCCCc--ceecCCCCCeee
Q psy14221 292 CDCDPLGTLSVPQPCHPVSGTC-YCQPGVTGDRCDQCDTGYWNFTV------NGCTSCNCNRDGSL--HFSCDVHTGQCS 362 (546)
Q Consensus 292 ~~C~~~g~c~~~~~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~~~------~~C~~~~C~~~g~c--~~~C~~~~~~C~ 362 (546)
+||.++++|.... ....++| .|+++|+|.+||+|++|||+.+. ..|.+++|+++++. ...|+..+++|+
T Consensus 1 C~C~~~g~C~~~~--~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~ 78 (162)
T 1klo_A 1 CPCPGGSSCAIVP--KTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECL 78 (162)
T ss_dssp CCSCTTCCEEECS--SSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBC
T ss_pred CcCcCcCcccccC--CCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCccc
Confidence 3678888773221 1146799 79999999999999999999753 35888899887432 136888899995
Q ss_pred -eCCCCCCCCCCcCCCCCcCCCC-----CCCCCCCCCCCcccCC--ccccCCceEecCCCCcCCCCCCCCCCCCCCC
Q psy14221 363 -CKPNMTGLACDQCTEGHWGLQE-----LGCASCECNAVGSVNN--SCDQITGQCVCRKGVTGRTCDKCRPDYFGFS 431 (546)
Q Consensus 363 -C~~g~~G~~C~~C~~g~~g~~~-----~~C~~~~C~~~g~c~~--~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~ 431 (546)
|+++|+|.+|++|++|||+... ..|+++.|++.++... .|++.+++|+|++||+|.+|++|+++||+++
T Consensus 79 ~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~ 155 (162)
T 1klo_A 79 KCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQ 155 (162)
T ss_dssp CBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGG
T ss_pred CCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCC
Confidence 9999999999999999999762 4688999999887644 7888899999999999999999999999976
No 4
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.74 E-value=6.9e-19 Score=159.64 Aligned_cols=140 Identities=31% Similarity=0.799 Sum_probs=111.5
Q ss_pred CCCCCCCCcceecCCCCCee-eeCCCCCCCCCCcCCCCCcCCCC------CCCCCCCCCCCcccC--CccccCCceEe-c
Q psy14221 342 CNCNRDGSLHFSCDVHTGQC-SCKPNMTGLACDQCTEGHWGLQE------LGCASCECNAVGSVN--NSCDQITGQCV-C 411 (546)
Q Consensus 342 ~~C~~~g~c~~~C~~~~~~C-~C~~g~~G~~C~~C~~g~~g~~~------~~C~~~~C~~~g~c~--~~c~~~~~~C~-C 411 (546)
++|.++++|...=....++| .|+++|+|.+|++|+++||+... ..|+++.|++++... ..|++.+++|+ |
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C 80 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKC 80 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCB
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCC
Confidence 47888885543211134799 79999999999999999999652 368888898875432 36777899995 9
Q ss_pred CCCCcCCCCCCCCCCCCCCCC-----CCcccCCcccCCC------CcccCCCCeEeCCCCCccCCCCCCCCCCCCCCCCC
Q psy14221 412 RKGVTGRTCDKCRPDYFGFSV-----NGCTECASCEQSG------MVCSEESGQCVCPPLTRGDLCIQCAPNSYGYRPLL 480 (546)
Q Consensus 412 ~~G~~G~~C~~C~~~~~g~~~-----~~C~~c~~C~~~~------g~C~~~~~~C~C~~g~~G~~C~~C~~~~~g~~~~~ 480 (546)
+++|+|.+|++|+++||+.+. ..|++|+ | .+. ++|++.+++|+|+++|+|.+|++|+++||++....
T Consensus 81 ~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~-C-~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~~~~ 158 (162)
T 1klo_A 81 IYNTAGFYCDRCKEGFFGNPLAPNPADKCKACA-C-NPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQ 158 (162)
T ss_dssp CTTEETTTTCEECTTEEECTTCSSGGGSEEECC-C-CTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGGGSS
T ss_pred CCCCcCCCcCcCchhhcCCccccCCCCCCeecc-C-CCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCCCCC
Confidence 999999999999999999763 3678876 8 443 38988899999999999999999999999987444
Q ss_pred CCC
Q psy14221 481 GCQ 483 (546)
Q Consensus 481 ~C~ 483 (546)
+|+
T Consensus 159 GC~ 161 (162)
T 1klo_A 159 GCE 161 (162)
T ss_dssp CCB
T ss_pred CcC
Confidence 554
No 5
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.72 E-value=3.8e-18 Score=172.10 Aligned_cols=159 Identities=29% Similarity=0.724 Sum_probs=73.0
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYW 332 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~ 332 (546)
.+|.++|.|.. .++|+|++||+|..|+. ..|.+ +|.++|+| . ..++|.|++||+|.+|+.
T Consensus 153 ~~C~~~G~C~~-----~~~C~C~~G~~G~~C~~-~~C~~-~C~~~G~C------~-~~~~C~C~~G~~G~~C~~------ 212 (324)
T 2ygq_A 153 GGCRNGGFCNE-----RRICECPDGFHGPHCEK-ALCTP-RCMNGGLC------V-TPGFCICPPGFYGVNCDK------ 212 (324)
T ss_dssp SCCCSSCEECT-----TSCEECCTTEESSSSCE-ESSSS-CCCTTCEE------C-SSCCEECCTTCBTTTTCB------
T ss_pred CCCCCCCEECC-----CCeEECCCCCcCCCCCC-CCCCC-CCCCCCEE------c-CCCEEeCCCCccCCCccc------
Confidence 57888887753 58999999999999986 34654 78888877 2 358899999999999985
Q ss_pred ccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecC
Q psy14221 333 NFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCR 412 (546)
Q Consensus 333 g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~ 412 (546)
+.|. .+|.++| +|. .+++|.|++||+|..|+. +.|. .+|.++|+|.. .++|.|+
T Consensus 213 ----~~C~-~~C~~~G----~C~-~~~~C~C~~G~~G~~C~~----------~~C~-~~C~~~g~C~~-----~~~C~C~ 266 (324)
T 2ygq_A 213 ----ANCS-TTCFNGG----TCF-YPGKCICPPGLEGEQCEI----------SKCP-QPCRNGGKCIG-----KSKCKCS 266 (324)
T ss_dssp ----CCCS-SCCCSSC----CBS-CSSCBCCCTTCCTTTTC---------------------------------------
T ss_pred ----CcCC-CCCCCCC----eeC-CCCeeeCCCCccCCCCCc----------CcCC-CcCCCCCEECC-----CCEEECC
Confidence 3454 5798988 554 358999999999999983 2353 57888887753 5799999
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCCCCCCC
Q psy14221 413 KGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLCIQCAP 471 (546)
Q Consensus 413 ~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C~~C~~ 471 (546)
+||+|..|+. +.|.. +| .++|+|+ ..++|.|++||+|.+|++..+
T Consensus 267 ~G~~G~~C~~----------~~C~~--~C-~~~g~C~-~~~~C~C~~G~~G~~C~~~~~ 311 (324)
T 2ygq_A 267 KGYQGDLCSK----------PVCEP--GC-GAHGTCH-EPNKCQCQEGWHGRHCNKRYE 311 (324)
T ss_dssp -----------------------------------------------------------
T ss_pred CCCcCCCCcC----------CCCCC--CC-CCCCEEC-CCCEeECCCCCcCCCCCCCCc
Confidence 9999999973 12331 48 7889998 478999999999999987443
No 6
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.70 E-value=1.3e-21 Score=188.25 Aligned_cols=205 Identities=14% Similarity=0.002 Sum_probs=144.6
Q ss_pred Ccccc--CCcccCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcC
Q psy14221 166 PRHIL--TSRGCASCEDGYIGDHCESCDAG------YYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERC 237 (546)
Q Consensus 166 ~~C~~--~~~~C~~C~~g~~G~~C~~~~~~------c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C 237 (546)
++|++ ++|+| .|++||+|.+||+.+++ +.+.||+++++|+ .|.+|+
T Consensus 44 G~C~~g~~~y~C-~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~-----------------------~G~~c~-- 97 (267)
T 4fbr_A 44 GKTLKGTMTYNG-EGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV-----------------------LGARDK-- 97 (267)
T ss_dssp TSEEEEEEEETT-SCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEE-----------------------CCCCSS--
T ss_pred CeecCCCCCeEE-eCCCCcccccccccccccccccCcCCCcccCCCeee-----------------------ccCccc--
Confidence 67777 88999 99999999999988887 6666666655443 466675
Q ss_pred CCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCcEEecC
Q psy14221 238 KPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALD-CPPCDCDPLGTLSVPQPCHPVSGTCYCQ 316 (546)
Q Consensus 238 ~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~-C~~~~C~~~g~c~~~~~C~~~~~~C~C~ 316 (546)
..++|.+.||.++++|... ..+|+|+|++||+|.+|+..+. |...++.+...| . .+.
T Consensus 98 --------~~~eC~s~pC~ngG~C~~~--~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC------~------ngg 155 (267)
T 4fbr_A 98 --------QNIVAVSIKSNDGGKTLTG--TTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPW------H------SGG 155 (267)
T ss_dssp --------CCEEEEEEECSSTTSEEEE--EEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCC------E------EEE
T ss_pred --------cccccCCCCCCCCCEEecC--CccEEeeCCCCccccCCCCCcccccccCCcCCccc------c------CCc
Confidence 3457889999999999763 5689999999999999996543 332222222211 1 112
Q ss_pred CCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCC------CCCC
Q psy14221 317 PGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELG------CASC 390 (546)
Q Consensus 317 ~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~------C~~~ 390 (546)
..+.|.+|++ .+ .|...+|.++|+|.+. ..+|+|.|++||+|.+|+. +++. |...
T Consensus 156 ~c~~G~~c~~--------~i-~c~~~~c~ngg~C~dg--~~~y~C~Cp~Gf~G~~c~~--------~i~ec~~~~~c~~~ 216 (267)
T 4fbr_A 156 VWVLGTRGKQ--------NV-INVDAKSNDGGKTLSG--TMTYNGEGPIGFRGTLTSP--------DTYTVENQWGGSTA 216 (267)
T ss_dssp EEECCSSTTS--------CE-EEEEEECSSTTSEEEE--EEEETTSCCEEEEEEEEET--------TEEEEEEECSCTTS
T ss_pred ceeccccccc--------cc-ccCCCCCCCCCEeeCC--CCCeEEeCCCCcccccccc--------ccceeccCCCccCC
Confidence 2345778876 22 3556789999977653 4678999999999999984 2222 3344
Q ss_pred CCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCccc--CCCCeEeCCCCCccC
Q psy14221 391 ECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCS--EESGQCVCPPLTRGD 464 (546)
Q Consensus 391 ~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~--~~~~~C~C~~g~~G~ 464 (546)
+|++++ ++.+.|+.++.+..|+. +| .++|+|. ..+|+|+|++||+|+
T Consensus 217 ~c~~gG---------~~~~~C~~g~n~~~c~~-----------------~c-~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 217 PWNPGG---------FWMIGARNGQNVVALNV-----------------AS-SDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp CCEEEE---------EEECCCCTTCCEEEEEE-----------------EC-SSTTSEEEEEEEETTSCCEEEEEE
T ss_pred cccCCC---------eEEEecCCCCccccCCc-----------------CC-CCCCEeeCCCcceeecCCCCcccc
Confidence 454433 34556777777666543 36 7899998 567999999999986
No 7
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.69 E-value=1.6e-17 Score=167.50 Aligned_cols=157 Identities=31% Similarity=0.764 Sum_probs=72.5
Q ss_pred CCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEEcCC
Q psy14221 197 NPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQCKE 276 (546)
Q Consensus 197 ~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~ 276 (546)
++|.++|+|.. .+.|. |.+||.|.+|+. ..|.+ +|.++|.|.. .++|+|++
T Consensus 153 ~~C~~~G~C~~-----------~~~C~-C~~G~~G~~C~~-----------~~C~~-~C~~~G~C~~-----~~~C~C~~ 203 (324)
T 2ygq_A 153 GGCRNGGFCNE-----------RRICE-CPDGFHGPHCEK-----------ALCTP-RCMNGGLCVT-----PGFCICPP 203 (324)
T ss_dssp SCCCSSCEECT-----------TSCEE-CCTTEESSSSCE-----------ESSSS-CCCTTCEECS-----SCCEECCT
T ss_pred CCCCCCCEECC-----------CCeEE-CCCCCcCCCCCC-----------CCCCC-CCCCCCEEcC-----CCEEeCCC
Confidence 57888888873 58895 999999999974 23543 7888887754 58999999
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCC
Q psy14221 277 NRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDV 356 (546)
Q Consensus 277 g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~ 356 (546)
||+|..|+.. .|. .+|.++|+|. ..++|.|++||+|.+|+. +.|. .+|.++| +|.
T Consensus 204 G~~G~~C~~~-~C~-~~C~~~G~C~-------~~~~C~C~~G~~G~~C~~----------~~C~-~~C~~~g----~C~- 258 (324)
T 2ygq_A 204 GFYGVNCDKA-NCS-TTCFNGGTCF-------YPGKCICPPGLEGEQCEI----------SKCP-QPCRNGG----KCI- 258 (324)
T ss_dssp TCBTTTTCBC-CCS-SCCCSSCCBS-------CSSCBCCCTTCCTTTTC-------------------------------
T ss_pred CccCCCcccC-cCC-CCCCCCCeeC-------CCCeeeCCCCccCCCCCc----------CcCC-CcCCCCC----EEC-
Confidence 9999999863 475 5788888772 357899999999999975 3454 5788888 554
Q ss_pred CCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCC
Q psy14221 357 HTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKC 423 (546)
Q Consensus 357 ~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C 423 (546)
..++|.|++||+|..|+. +.|. .+|.++|+|.. +++|.|++||+|.+|++.
T Consensus 259 ~~~~C~C~~G~~G~~C~~----------~~C~-~~C~~~g~C~~-----~~~C~C~~G~~G~~C~~~ 309 (324)
T 2ygq_A 259 GKSKCKCSKGYQGDLCSK----------PVCE-PGCGAHGTCHE-----PNKCQCQEGWHGRHCNKR 309 (324)
T ss_dssp -------------------------------------------------------------------
T ss_pred CCCEEECCCCCcCCCCcC----------CCCC-CCCCCCCEECC-----CCEeECCCCCcCCCCCCC
Confidence 358999999999999983 2354 46888887743 689999999999999863
No 8
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.64 E-value=5.3e-16 Score=169.88 Aligned_cols=167 Identities=31% Similarity=0.744 Sum_probs=122.5
Q ss_pred CCccCCCCCCCCccc-cccCCCceEEcCCCccCCCCCCCC---------CCCC----CCCCCCCCCCCCCCCcCCCcEEe
Q psy14221 249 DCKPCECNTSGSLGD-ECDSISGQCQCKENRAGRTCNLAL---------DCPP----CDCDPLGTLSVPQPCHPVSGTCY 314 (546)
Q Consensus 249 ~C~~~~C~~~g~c~~-~c~~~~~~C~C~~g~~G~~C~~~~---------~C~~----~~C~~~g~c~~~~~C~~~~~~C~ 314 (546)
+|...+|.+++.|.. .-....++|.|++||+|..|+... .|.. .+|.++|+| ..++|.
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C--------~~g~C~ 507 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGEC--------LCGQCV 507 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEE--------CSSSEE
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEE--------ECCeeE
Confidence 456677888777762 111124569999999999998542 4764 348887777 358999
Q ss_pred cC----CCCcCCCCCcCCCCCCccCCCCCCC---CCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCC
Q psy14221 315 CQ----PGVTGDRCDQCDTGYWNFTVNGCTS---CNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGC 387 (546)
Q Consensus 315 C~----~g~~G~~C~~C~~g~~g~~~~~C~~---~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C 387 (546)
|+ +||+|.+|+. +++.|.. .+|.++| .|.. ++|.|++||+|..|+ |+. ..+.|
T Consensus 508 C~~~~~~Gy~G~~Ce~--------~~~~C~~~~~~~C~~~G----~C~~--g~C~C~~Gy~G~~Ce-C~~-----~~~~C 567 (690)
T 3fcs_B 508 CHSSDFGKITGKYCEC--------DDFSCVRYKGEMCSGHG----QCSC--GDCLCDSDWTGYYCN-CTT-----RTDTC 567 (690)
T ss_dssp ECCCSSCCCBSTTSCB--------CSSCCCBSSSSBGGGSE----EEET--TEEEECTTEESSSSC-EEC-----CCTTT
T ss_pred eecCCCCCeeCCCcCc--------ccCcCcCCCCCCCCCCC----EecC--CeeECcCCCcCCCCc-cCC-----CCCcc
Confidence 99 9999999985 4456664 4688877 6643 899999999999998 211 23456
Q ss_pred CC---CCCCCCcccCCccccCCceEec-CCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCcc
Q psy14221 388 AS---CECNAVGSVNNSCDQITGQCVC-RKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRG 463 (546)
Q Consensus 388 ~~---~~C~~~g~c~~~c~~~~~~C~C-~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G 463 (546)
.. .+|.++|+|. .++|.| ++||+|..|+.|+. |. .+| .++++|.. |..+|+|
T Consensus 568 ~~~~g~~C~~~G~C~------~g~C~C~~~Gy~G~~Ce~C~~---------C~--~~C-~~~g~Cv~------C~~g~tG 623 (690)
T 3fcs_B 568 MSSNGLLCSGRGKCE------CGSCVCIQPGSYGDTCEKCPT---------CP--DAC-TFKKECVE------CKKFDRG 623 (690)
T ss_dssp BCTTSSBTSSSCEEE------TTEEECCSTTCBSTTSCBCTT---------SC--CTT-TSCCGGGT------TTTTCCS
T ss_pred cCCCCCCCCCCCEEe------CCEEECCCCCccCCCcCcCCC---------CC--CCC-CCCCCccc------CCCCCcc
Confidence 53 5798888772 369999 99999999997532 21 158 78899973 9999999
Q ss_pred CCCC
Q psy14221 464 DLCI 467 (546)
Q Consensus 464 ~~C~ 467 (546)
.+|+
T Consensus 624 ~~C~ 627 (690)
T 3fcs_B 624 ALHD 627 (690)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 9765
No 9
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.63 E-value=9.6e-17 Score=146.87 Aligned_cols=150 Identities=31% Similarity=0.655 Sum_probs=103.6
Q ss_pred CCceEEcCCCccCCCCCCCCCCCCC-CCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCC-
Q psy14221 268 ISGQCQCKENRAGRTCNLALDCPPC-DCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCN- 345 (546)
Q Consensus 268 ~~~~C~C~~g~~G~~C~~~~~C~~~-~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~- 345 (546)
..++|+|++||+|..|+. .|.+. +|.++++| + ..++|+|++||+|..|+. +.|.. .|.
T Consensus 15 ~~~~c~C~~g~~G~~C~~--~C~~~~~c~~~g~C------~-~~g~C~C~~G~~G~~C~~----------~~C~~-~C~~ 74 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNK--FCRPRDDFFGHYAC------D-QNGNKTCMEGWMGPECNR----------AICRQ-GCSP 74 (169)
T ss_dssp ------CCTTEETTTTCE--ECCCEEETTEEEEE------C-SSCCEEECTTEESTTSCE----------ECCCT-TCCT
T ss_pred cCeeeeCCCcCcCCCccc--ccCCCCCcCCCCEe------C-CCCeeECCCCCcCCCCCC----------CCCCC-CCCC
Confidence 467899999999999974 35532 45555544 4 477899999999999985 23432 354
Q ss_pred CCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCC
Q psy14221 346 RDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRP 425 (546)
Q Consensus 346 ~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~ 425 (546)
.+| .|. .+++|+|++||+|..|++|... ..|.+ ++|. .+++|+|++||+|..|++
T Consensus 75 ~~g----~C~-~~~~C~C~~G~~G~~C~~C~~~-----------~~C~~-g~C~-----~~~~C~C~~G~~G~~C~~--- 129 (169)
T 2vj2_A 75 KHG----SCK-LPGDCRCQYGWQGLYCDKCIPH-----------PGCVH-GICN-----EPWQCLCETNWGGQLCDK--- 129 (169)
T ss_dssp TTE----ECS-STTCCEECTTEESSSSCEECCC-----------TTCSS-EECS-----STTCCEECTTEETTTTCE---
T ss_pred CCc----ccC-CCCeeECCCCCCCCCcccCCCC-----------CCCCC-CCcC-----CCCEEeCCCCCCCCcccC---
Confidence 445 564 3789999999999999875321 12553 3553 378999999999999984
Q ss_pred CCCCCCCCCcccCCcccCCCCccc---CCCCeEeCCCCCccCCCCC
Q psy14221 426 DYFGFSVNGCTECASCEQSGMVCS---EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 426 ~~~g~~~~~C~~c~~C~~~~g~C~---~~~~~C~C~~g~~G~~C~~ 468 (546)
.++.|..-.+| .++|+|+ ..+++|+|++||+|++|++
T Consensus 130 -----~~~~C~~~~~C-~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 130 -----DLNYCGTHQPC-LNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp -----ESCHHHHTCCC-CTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred -----CCCCCCCCCCC-CCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 22345431258 7889997 2468999999999999974
No 10
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.61 E-value=1.1e-16 Score=146.42 Aligned_cols=149 Identities=26% Similarity=0.551 Sum_probs=95.6
Q ss_pred CcccCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCC
Q psy14221 172 SRGCASCEDGYIGDHCESCDAGYYG-NPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDC 250 (546)
Q Consensus 172 ~~~C~~C~~g~~G~~C~~~~~~c~~-~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C 250 (546)
.++| .|++||+|..|+. .|.. .++.++++|. .+++|+ |.+||.|..|+. ..|
T Consensus 16 ~~~c-~C~~g~~G~~C~~---~C~~~~~c~~~g~C~-----------~~g~C~-C~~G~~G~~C~~-----------~~C 68 (169)
T 2vj2_A 16 RSAV-TCDDYYYGFGCNK---FCRPRDDFFGHYACD-----------QNGNKT-CMEGWMGPECNR-----------AIC 68 (169)
T ss_dssp ------CCTTEETTTTCE---ECCCEEETTEEEEEC-----------SSCCEE-ECTTEESTTSCE-----------ECC
T ss_pred Ceee-eCCCcCcCCCccc---ccCCCCCcCCCCEeC-----------CCCeeE-CCCCCcCCCCCC-----------CCC
Confidence 3445 5666666666542 1211 1244444553 267785 888888888863 123
Q ss_pred ccCCCC-CCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCC-CCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCC
Q psy14221 251 KPCECN-TSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCD-CDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCD 328 (546)
Q Consensus 251 ~~~~C~-~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~-C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~ 328 (546)
.. .|. .+|.|.. +++|+|++||+|..|+. |...+ |.++ +| . ..++|+|++||+|.+|++
T Consensus 69 ~~-~C~~~~g~C~~-----~~~C~C~~G~~G~~C~~---C~~~~~C~~g-~C------~-~~~~C~C~~G~~G~~C~~-- 129 (169)
T 2vj2_A 69 RQ-GCSPKHGSCKL-----PGDCRCQYGWQGLYCDK---CIPHPGCVHG-IC------N-EPWQCLCETNWGGQLCDK-- 129 (169)
T ss_dssp CT-TCCTTTEECSS-----TTCCEECTTEESSSSCE---ECCCTTCSSE-EC------S-STTCCEECTTEETTTTCE--
T ss_pred CC-CCCCCCcccCC-----CCeeECCCCCCCCCccc---CCCCCCCCCC-Cc------C-CCCEEeCCCCCCCCcccC--
Confidence 32 343 3454432 58899999999999863 55444 6543 55 3 578999999999999986
Q ss_pred CCCCccCCCCCCC-CCCCCCCCcceecCCCCCeeeeCCCCCCCCCC
Q psy14221 329 TGYWNFTVNGCTS-CNCNRDGSLHFSCDVHTGQCSCKPNMTGLACD 373 (546)
Q Consensus 329 ~g~~g~~~~~C~~-~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~ 373 (546)
++++|.. .+|.++|+|..+ ...+++|+|++||+|++|+
T Consensus 130 ------~~~~C~~~~~C~~~g~C~~~-~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 130 ------DLNYCGTHQPCLNGGTCSNT-GPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp ------ESCHHHHTCCCCTTCEEEEC-STTCEEEECCTTCCSTTSC
T ss_pred ------CCCCCCCCCCCCCCCEEcCC-CCCCcEeECCCCCcCcCcC
Confidence 5677764 789998865542 2356899999999999887
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.61 E-value=1e-15 Score=167.69 Aligned_cols=177 Identities=28% Similarity=0.691 Sum_probs=127.2
Q ss_pred CCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccC----CCCCCCCccccccCC
Q psy14221 193 GYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPC----ECNTSGSLGDECDSI 268 (546)
Q Consensus 193 ~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~----~C~~~g~c~~~c~~~ 268 (546)
+|..+||.++++|.. .++.+ ..|.|. |.+||.|.+|+ +..++++....+.|... +|+++|+|.
T Consensus 436 ~C~~~pc~n~~~C~~---g~G~~--~~G~C~-C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~------ 502 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNN---GNGTF--ECGVCR-CGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRGECL------ 502 (690)
T ss_dssp GGGTTCCTTCTTTTT---TSEEE--ETTEEE-ECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSEEEC------
T ss_pred CCcCCCCCCCCcccC---CCCeE--eCCceE-eCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCCEEE------
Confidence 567778888877762 01222 256795 99999999995 77777766666778753 588888774
Q ss_pred CceEEcC----CCccCCCCCCC-CCCCC---CCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCC
Q psy14221 269 SGQCQCK----ENRAGRTCNLA-LDCPP---CDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCT 340 (546)
Q Consensus 269 ~~~C~C~----~g~~G~~C~~~-~~C~~---~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~ 340 (546)
.++|.|+ +||+|..|+.. ..|.. .+|.++|+| ..++|.|++||+|.+|+ |+. +++.|.
T Consensus 503 ~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C--------~~g~C~C~~Gy~G~~Ce-C~~-----~~~~C~ 568 (690)
T 3fcs_B 503 CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC--------SCGDCLCDSDWTGYYCN-CTT-----RTDTCM 568 (690)
T ss_dssp SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEE--------ETTEEEECTTEESSSSC-EEC-----CCTTTB
T ss_pred CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEe--------cCCeeECcCCCcCCCCc-cCC-----CCCccc
Confidence 3799999 99999999843 45874 468777776 33899999999999998 211 345676
Q ss_pred C---CCCCCCCCcceecCCCCCeeee-CCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCc
Q psy14221 341 S---CNCNRDGSLHFSCDVHTGQCSC-KPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVT 416 (546)
Q Consensus 341 ~---~~C~~~g~c~~~C~~~~~~C~C-~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~ 416 (546)
. .+|.++| +|. .++|.| ++||+|..|+.|+ .| +.+|.++++|.. |..+|+
T Consensus 569 ~~~g~~C~~~G----~C~--~g~C~C~~~Gy~G~~Ce~C~---------~C-~~~C~~~g~Cv~----------C~~g~t 622 (690)
T 3fcs_B 569 SSNGLLCSGRG----KCE--CGSCVCIQPGSYGDTCEKCP---------TC-PDACTFKKECVE----------CKKFDR 622 (690)
T ss_dssp CTTSSBTSSSC----EEE--TTEEECCSTTCBSTTSCBCT---------TS-CCTTTSCCGGGT----------TTTTCC
T ss_pred CCCCCCCCCCC----EEe--CCEEECCCCCccCCCcCcCC---------CC-CCCCCCCCCccc----------CCCCCc
Confidence 4 6799988 564 369999 9999999999752 24 356888776632 999999
Q ss_pred CCCCCC
Q psy14221 417 GRTCDK 422 (546)
Q Consensus 417 G~~C~~ 422 (546)
|..|+.
T Consensus 623 G~~C~~ 628 (690)
T 3fcs_B 623 GALHDE 628 (690)
T ss_dssp SSSSSS
T ss_pred cCCCCc
Confidence 998763
No 12
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.60 E-value=5.7e-16 Score=161.64 Aligned_cols=163 Identities=25% Similarity=0.599 Sum_probs=100.8
Q ss_pred CcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCc-CCCCcccCCCCCCC
Q psy14221 172 SRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCER-CKPLYYGDPRTGDC 250 (546)
Q Consensus 172 ~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~-C~~G~~g~~~~~~C 250 (546)
...| .|++||+|+.|+. .| .||.++|+|.. .++.|. |++||.|.+|++ |.++|+|....+.|
T Consensus 184 ~~~c-~C~~g~~G~~C~~---~C--~~C~~~G~C~~----------~~g~C~-C~~G~~G~~Ce~~C~~g~~g~~C~~~C 246 (423)
T 2gy5_A 184 LIVR-RCEAQKWGPECNH---LC--TACMNNGVCHE----------DTGECI-CPPGFMGRTCEKACELHTFGRTCKERC 246 (423)
T ss_dssp EEEC-SSCTTEESTTSCE---EC--CCCCTTCEECT----------TTCCEE-CCTTEESTTSCEECCTTEESTTSCEEC
T ss_pred ccCC-cCCCCCCCCCCCC---CC--CCCCCCCEEEC----------CCCcEe-CCCCccCCCcccccCCCCCCCCcCccC
Confidence 4457 8999999999984 23 37888888863 578996 999999999986 88888886533322
Q ss_pred c-cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc-CC
Q psy14221 251 K-PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ-CD 328 (546)
Q Consensus 251 ~-~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~-C~ 328 (546)
. ..+|.+++ .|++.+++|.|++||+|.+|+. |+
T Consensus 247 ~~~~~C~~~g---------------------------------------------~C~~~~~~C~C~~G~~G~~C~~~C~ 281 (423)
T 2gy5_A 247 SGQEGCKSYV---------------------------------------------FCLPDPYGCSCATGWKGLQCNEACH 281 (423)
T ss_dssp CSTTTTTTCC---------------------------------------------EEETTTTEEECCBTCBSGGGCBCCC
T ss_pred CCCCCCCCCC---------------------------------------------EECCCCCeEEeCCCcccccccCccC
Confidence 1 11222222 2222445555555555555553 55
Q ss_pred CCCCccCCCCCC-CCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCc
Q psy14221 329 TGYWNFTVNGCT-SCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITG 407 (546)
Q Consensus 329 ~g~~g~~~~~C~-~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~ 407 (546)
+||+|.. |. +++|.++| +|+... .|.|++||+|.+|+.+..... .+ .......
T Consensus 282 ~G~~G~~---C~~~C~C~ngg----~C~~~~-~C~C~~G~~G~~Ce~~~~~~~---------~~---------~~~~~~~ 335 (423)
T 2gy5_A 282 PGFYGPD---CKLRCSCNNGE----MCDRFQ-GCLCSPGWQGLQCEREGIPRM---------TP---------KIVDLPD 335 (423)
T ss_dssp TTBCSBT---TCCBCCCTTCC----EEETTT-EEECCTTCBSTTSCBCSSCCC---------CC---------EECSCCS
T ss_pred CCCcCCc---ccccccCCCCC----EecCCC-ceECCCCCcCCCCccCccCCc---------Cc---------ceecCCC
Confidence 5555532 22 45788887 565333 499999999999886321100 00 0001234
Q ss_pred eEecCCCCcCCCCCC
Q psy14221 408 QCVCRKGVTGRTCDK 422 (546)
Q Consensus 408 ~C~C~~G~~G~~C~~ 422 (546)
.|.|.+||.|..|+.
T Consensus 336 ~~~c~~g~~g~~C~~ 350 (423)
T 2gy5_A 336 HIEVNSGKFNPICKA 350 (423)
T ss_dssp BCCEESEEECCEEEE
T ss_pred eEEeCCCccCCcccc
Confidence 577888888877763
No 13
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.60 E-value=7.1e-16 Score=160.89 Aligned_cols=162 Identities=24% Similarity=0.576 Sum_probs=121.2
Q ss_pred CceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc-CCCCCCccCCC-CCC-CCCCC
Q psy14221 269 SGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ-CDTGYWNFTVN-GCT-SCNCN 345 (546)
Q Consensus 269 ~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~-C~~g~~g~~~~-~C~-~~~C~ 345 (546)
...|.|++||+|+.|+. .|. +|.++|+| +..+++|.|++||+|.+|+. |.++|+|..-. .|. ..+|.
T Consensus 184 ~~~c~C~~g~~G~~C~~--~C~--~C~~~G~C------~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~ 253 (423)
T 2gy5_A 184 LIVRRCEAQKWGPECNH--LCT--ACMNNGVC------HEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCK 253 (423)
T ss_dssp EEECSSCTTEESTTSCE--ECC--CCCTTCEE------CTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTT
T ss_pred ccCCcCCCCCCCCCCCC--CCC--CCCCCCEE------ECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCC
Confidence 35689999999999975 353 78888876 33578999999999999996 99999886421 232 23465
Q ss_pred CCCCcceecCCCCCeeeeCCCCCCCCCCc-CCCCCcCCCCCCCC-CCCCCCCcccCCccccCCceEecCCCCcCCCCCCC
Q psy14221 346 RDGSLHFSCDVHTGQCSCKPNMTGLACDQ-CTEGHWGLQELGCA-SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKC 423 (546)
Q Consensus 346 ~~g~c~~~C~~~~~~C~C~~g~~G~~C~~-C~~g~~g~~~~~C~-~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C 423 (546)
+++ .|+..+++|.|++||+|.+|+. |.+||+|.. |. .++|.++++|... . .|.|++||+|.+|+++
T Consensus 254 ~~g----~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~---C~~~C~C~ngg~C~~~----~-~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 254 SYV----FCLPDPYGCSCATGWKGLQCNEACHPGFYGPD---CKLRCSCNNGEMCDRF----Q-GCLCSPGWQGLQCERE 321 (423)
T ss_dssp TCC----EEETTTTEEECCBTCBSGGGCBCCCTTBCSBT---TCCBCCCTTCCEEETT----T-EEECCTTCBSTTSCBC
T ss_pred CCC----EECCCCCeEEeCCCcccccccCccCCCCcCCc---ccccccCCCCCEecCC----C-ceECCCCCcCCCCccC
Confidence 555 6667889999999999999997 999999976 54 5689988876442 3 4999999999999974
Q ss_pred CCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 424 RPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 424 ~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
...... .........|.|.+||.|..|+.
T Consensus 322 ~~~~~~----------------~~~~~~~~~~~c~~g~~g~~C~~ 350 (423)
T 2gy5_A 322 GIPRMT----------------PKIVDLPDHIEVNSGKFNPICKA 350 (423)
T ss_dssp SSCCCC----------------CEECSCCSBCCEESEEECCEEEE
T ss_pred ccCCcC----------------cceecCCCeEEeCCCccCCcccc
Confidence 321110 01111345688999999988865
No 14
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.55 E-value=4.8e-15 Score=130.38 Aligned_cols=113 Identities=25% Similarity=0.548 Sum_probs=94.6
Q ss_pred CCCCCc--cCCCCCCCCccccccCCCceEEcCCCccCCCCCC-CCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCC
Q psy14221 246 RTGDCK--PCECNTSGSLGDECDSISGQCQCKENRAGRTCNL-ALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGD 322 (546)
Q Consensus 246 ~~~~C~--~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~-~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~ 322 (546)
++++|. +.+|.++++|..+ .++++|+|++||+|..|+. ..+|...+|.++++|... .+.++|.|++||+|.
T Consensus 4 dideC~~~~~~C~~~g~C~~~--~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~----~g~~~C~C~~G~~G~ 77 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINT--LGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ----IGEFQCICMPGYEGV 77 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEEC--SSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEEC----SSCEEEECCTTEESS
T ss_pred ccccccCCCCCCCCCCEeECC--CCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCC----CCCceeeCCCCCcCC
Confidence 467786 6789999988764 5678999999999999984 456999999999988433 378999999999999
Q ss_pred CCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 323 RCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 323 ~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
+|+. ++++|...+|.++++|... ...++|.|++||+|.+|+.
T Consensus 78 ~C~~--------~~~~C~~~~C~~~g~C~~~--~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 78 HCEV--------NTDECASSPCLHNGRCLDK--INEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp SSCE--------ECCTTTTCCSTTTCEEEEC--SSCEEEECCTTEESSSSCE
T ss_pred ccee--------cCCcccCCCcCCCCEeECC--CCCeEEECCCCCcCCccCc
Confidence 9986 6788998999999966653 4678999999999999974
No 15
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.51 E-value=1.3e-14 Score=127.52 Aligned_cols=115 Identities=30% Similarity=0.573 Sum_probs=94.3
Q ss_pred CCCCCCC--CCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCee
Q psy14221 284 NLALDCP--PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQC 361 (546)
Q Consensus 284 ~~~~~C~--~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C 361 (546)
+..++|. ..+|.++++|... .++++|+|++||+|..|+. ++++|...+|.++++|... ...++|
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~----~g~~~C~C~~Gy~G~~C~~--------~~~~C~~~~C~~~~~C~~~--~g~~~C 68 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINT----LGSFECQCLQGYTGPRCEI--------DVNECVSNPCQNDATCLDQ--IGEFQC 68 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEEC----SSSEEEECCTTEESTTSCE--------ECCTTTTCCCCSSCEEEEC--SSCEEE
T ss_pred cccccccCCCCCCCCCCEeECC----CCCEEEECCCCCcCCcccc--------cCccCCCCCCCCCCEEeCC--CCCcee
Confidence 3445687 6789999988433 3789999999999999986 6788999999999966653 467899
Q ss_pred eeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 362 SCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 362 ~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
.|++||+|..|+. +++.|...+|.++++|... ...++|.|++||+|..|+.
T Consensus 69 ~C~~G~~G~~C~~--------~~~~C~~~~C~~~g~C~~~--~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 69 ICMPGYEGVHCEV--------NTDECASSPCLHNGRCLDK--INEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp ECCTTEESSSSCE--------ECCTTTTCCSTTTCEEEEC--SSCEEEECCTTEESSSSCE
T ss_pred eCCCCCcCCccee--------cCCcccCCCcCCCCEeECC--CCCeEEECCCCCcCCccCc
Confidence 9999999999974 3567888899999988665 4578999999999999974
No 16
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.50 E-value=1.9e-14 Score=127.82 Aligned_cols=116 Identities=24% Similarity=0.517 Sum_probs=89.8
Q ss_pred CCccCCCCCCCCccccccCCCceEEcCCCccCCCCCC-------------CCCCCCCCCCCCCCCCCCCC---CcCCCcE
Q psy14221 249 DCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNL-------------ALDCPPCDCDPLGTLSVPQP---CHPVSGT 312 (546)
Q Consensus 249 ~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~-------------~~~C~~~~C~~~g~c~~~~~---C~~~~~~ 312 (546)
+|.+.+|.++++|...-..+.++|+|++||+|..|+. ...|...+|.++++|..... -..+.++
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 5778899999988754223578999999999999985 23477888999888842110 1226889
Q ss_pred EecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 313 CYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 313 C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
|.|++||+|.+|+. ++++|...+|.++++|.+. ..+++|.|++||+|++|+.
T Consensus 82 C~C~~G~~G~~C~~--------~i~~C~~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 82 CKCPRGFNGIHCQH--------NINECEVEPCKNGGICTDL--VANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EECCTTEESTTSCE--------ECCTTTTCCSCTTCEEEEE--TTEEEEECCTTCBSTTSCB
T ss_pred eECcCCCcCCCccc--------CCCcCCCCCCCCCCEeECC--CCCeEeECCCCCccCCcee
Confidence 99999999999986 6789999999999977654 5678999999999999885
No 17
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.48 E-value=2e-14 Score=157.01 Aligned_cols=167 Identities=28% Similarity=0.646 Sum_probs=117.4
Q ss_pred CCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCC-CCCCccC----CCCCCCCccccccCCC
Q psy14221 195 YGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPR-TGDCKPC----ECNTSGSLGDECDSIS 269 (546)
Q Consensus 195 ~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~-~~~C~~~----~C~~~g~c~~~c~~~~ 269 (546)
.+.+|.++|+|. .+.|. |.+||.|.+|+ |+.++++... ...|.+. +|+++|.|. .
T Consensus 433 ~s~~Cs~~G~C~------------~g~C~-C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~------~ 492 (687)
T 3k6s_B 433 DRSLCHGKGFLE------------CGICR-CDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCV------C 492 (687)
T ss_dssp CSSTGGGSEEES------------SSSEE-ECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSEEEE------T
T ss_pred CCCCCCCCCEEe------------CCEeE-cCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCCEEe------C
Confidence 455677777665 47895 99999999997 7777665542 2246543 488888774 3
Q ss_pred ceEEcC------CCccCCCCCC-CCCCCC---CCCCC--CCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCC
Q psy14221 270 GQCQCK------ENRAGRTCNL-ALDCPP---CDCDP--LGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVN 337 (546)
Q Consensus 270 ~~C~C~------~g~~G~~C~~-~~~C~~---~~C~~--~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~ 337 (546)
++|.|+ +||+|..|+. ...|.. .+|.+ +|+| ..++|.|++||+|.+|+ |+. +.+
T Consensus 493 G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C--------~~g~C~C~~G~~G~~Ce-c~~-----~~~ 558 (687)
T 3k6s_B 493 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLC--------FCGKCRCHPGFEGSACQ-CER-----TTE 558 (687)
T ss_dssp TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEE--------ETTEEEECTTCCSTTSC-SCC-----SSC
T ss_pred CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeE--------ECCEEEcCCCCcCCCCc-cCC-----CCC
Confidence 699999 9999999984 234763 35776 6766 34799999999999998 221 235
Q ss_pred CCCCC---CCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCC
Q psy14221 338 GCTSC---NCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKG 414 (546)
Q Consensus 338 ~C~~~---~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G 414 (546)
.|... +|.++| +|.. ++|.|++||+|.+|++|+ .|. .+|.+++.|. .|...
T Consensus 559 ~C~~~~g~~Cs~~G----~C~~--g~C~C~~Gy~G~~Ce~c~---------~C~-~~C~~~g~Cv----------~C~~~ 612 (687)
T 3k6s_B 559 GCLNPRRVECSGRG----RCRC--NVCECHSGYQLPLCQECP---------GCP-SPCGKYISCA----------ECLKF 612 (687)
T ss_dssp TTBCTTCSBTSSSC----CBCS--SCBCCSTTCCTTTTCCCT---------TSC-CCCTTTHHHH----------TTTTS
T ss_pred CCCCCCCCCCCCCC----cCCC--CEEECCCCCcCCCCCCCC---------CCC-cccCCCCCCC----------cccCC
Confidence 56543 798888 5643 789999999999999753 242 3677666542 35555
Q ss_pred CcCCCCC
Q psy14221 415 VTGRTCD 421 (546)
Q Consensus 415 ~~G~~C~ 421 (546)
++|...+
T Consensus 613 ~~G~~~~ 619 (687)
T 3k6s_B 613 EKGPFGK 619 (687)
T ss_dssp CSCCCSS
T ss_pred CCCCCCc
Confidence 6665433
No 18
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.47 E-value=4.2e-18 Score=163.79 Aligned_cols=183 Identities=11% Similarity=0.008 Sum_probs=133.3
Q ss_pred CCcccCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCC
Q psy14221 171 TSRGCASCEDG---YIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRT 247 (546)
Q Consensus 171 ~~~~C~~C~~g---~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~ 247 (546)
+.+.+ .+.|| |.|.+++..+..+. .++.++|+|+. ...++.|. |+.||.|.+||. .+
T Consensus 11 Gg~s~-~~~pgg~~~~g~~~~~n~~~~~-~~c~ngG~C~~--------g~~~y~C~-Cp~Gf~G~~Ce~---------ni 70 (267)
T 4fbr_A 11 GGSQA-TWNPGGLWLIGARDKQNVVALD-IKSDDGGKTLK--------GTMTYNGE-GPIGFRGTLSSA---------NN 70 (267)
T ss_dssp SSTTS-CCEEEEEEECCCCSSCCEEEEE-EECSSTTSEEE--------EEEEETTS-CCEEEEEEECST---------TE
T ss_pred CcccC-CcCCCCceeeccccccccccCC-CCcCCCCeecC--------CCCCeEEe-CCCCcccccccc---------cc
Confidence 55666 77777 78888886555444 37889999986 44577895 999999999986 55
Q ss_pred CC------CccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcC
Q psy14221 248 GD------CKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTG 321 (546)
Q Consensus 248 ~~------C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G 321 (546)
++ |.+.||++++++ |.|.+|+..++|.+.||.++++|.+. ..+|+|.|++||+|
T Consensus 71 ~ec~~~~~c~s~pC~nggtc----------------~~G~~c~~~~eC~s~pC~ngG~C~~~----~~sy~C~C~~Gf~G 130 (267)
T 4fbr_A 71 YTVENQWGGTSAPWQPGGVW----------------VLGARDKQNIVAVSIKSNDGGKTLTG----TTTYNGEGPIGFKS 130 (267)
T ss_dssp EEEEEESSSTTSCEEEEEEE----------------ECCCCSSCCEEEEEEECSSTTSEEEE----EEEETTSCCEEEEE
T ss_pred cccccccCcCCCcccCCCee----------------eccCccccccccCCCCCCCCCEEecC----CccEEeeCCCCccc
Confidence 55 666777765432 57899998888999999999999443 27899999999999
Q ss_pred CCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCc
Q psy14221 322 DRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNS 401 (546)
Q Consensus 322 ~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~ 401 (546)
.+|+. ++++|+..++...+.|.. +...|.|.+|++. ..|.+.+|.++|+|...
T Consensus 131 ~~Ce~--------~~d~C~n~~~c~s~pC~n----------gg~c~~G~~c~~~---------i~c~~~~c~ngg~C~dg 183 (267)
T 4fbr_A 131 EVTDG--------DTYSVENQWGGSAAPWHS----------GGVWVLGTRGKQN---------VINVDAKSNDGGKTLSG 183 (267)
T ss_dssp EECCC--------CEEEEEEECSSTTSCCEE----------EEEEECCSSTTSC---------EEEEEEECSSTTSEEEE
T ss_pred cCCCC--------CcccccccCCcCCccccC----------Ccceecccccccc---------cccCCCCCCCCCEeeCC
Confidence 99997 566644333322221111 1112457777752 23557789999999765
Q ss_pred cccCCceEecCCCCcCCCCCC
Q psy14221 402 CDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 402 c~~~~~~C~C~~G~~G~~C~~ 422 (546)
..+|+|.|++||+|.+|+.
T Consensus 184 --~~~y~C~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 184 --TMTYNGEGPIGFRGTLTSP 202 (267)
T ss_dssp --EEEETTSCCEEEEEEEEET
T ss_pred --CCCeEEeCCCCcccccccc
Confidence 5689999999999999974
No 19
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.47 E-value=3.1e-14 Score=155.42 Aligned_cols=162 Identities=29% Similarity=0.784 Sum_probs=110.9
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCC----------CCCCC----CCCCCCCCCCCCCCcCCCcEEecC-
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLAL----------DCPPC----DCDPLGTLSVPQPCHPVSGTCYCQ- 316 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~----------~C~~~----~C~~~g~c~~~~~C~~~~~~C~C~- 316 (546)
+.+|+++|+|. .++|.|++||+|.+|+... .|... +|.++|+| ..++|.|+
T Consensus 434 s~~Cs~~G~C~------~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C--------~~G~C~C~~ 499 (687)
T 3k6s_B 434 RSLCHGKGFLE------CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC--------VCGQCLCHT 499 (687)
T ss_dssp SSTGGGSEEES------SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEE--------ETTEEEECC
T ss_pred CCCCCCCCEEe------CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEE--------eCCEEEcCC
Confidence 34555555442 4789999999999999221 36543 37777766 35799999
Q ss_pred -----CCCcCCCCCcCCCCCCccCCCCCCC---CCCCC--CCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCC
Q psy14221 317 -----PGVTGDRCDQCDTGYWNFTVNGCTS---CNCNR--DGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELG 386 (546)
Q Consensus 317 -----~g~~G~~C~~C~~g~~g~~~~~C~~---~~C~~--~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~ 386 (546)
+||+|.+|+. +...|.. .+|.+ +| +|. .++|.|++||+|..|+ |+. ....
T Consensus 500 ~~~~~~G~~G~~Ce~--------~~~~C~~~~~~~C~~~~~G----~C~--~g~C~C~~G~~G~~Ce-c~~-----~~~~ 559 (687)
T 3k6s_B 500 SDVPGKLIYGQYCEC--------DTINCERYNGQVCGGPGRG----LCF--CGKCRCHPGFEGSACQ-CER-----TTEG 559 (687)
T ss_dssp CCSTTCCEESTTSCE--------ESSCSCEETTEETSHHHHE----EEE--TTEEEECTTCCSTTSC-SCC-----SSCT
T ss_pred CCCCCCCcccccccc--------ccccccCCCCcCcCCCCCC----eEE--CCEEEcCCCCcCCCCc-cCC-----CCCC
Confidence 9999999984 3345552 35776 67 564 3799999999999998 321 1344
Q ss_pred CCC---CCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCcc
Q psy14221 387 CAS---CECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRG 463 (546)
Q Consensus 387 C~~---~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G 463 (546)
|.. .+|.++|+|. .++|.|++||+|.+|++|+. |. .+| .++++|. + |...++|
T Consensus 560 C~~~~g~~Cs~~G~C~------~g~C~C~~Gy~G~~Ce~c~~---------C~--~~C-~~~g~Cv----~--C~~~~~G 615 (687)
T 3k6s_B 560 CLNPRRVECSGRGRCR------CNVCECHSGYQLPLCQECPG---------CP--SPC-GKYISCA----E--CLKFEKG 615 (687)
T ss_dssp TBCTTCSBTSSSCCBC------SSCBCCSTTCCTTTTCCCTT---------SC--CCC-TTTHHHH----T--TTTSCSC
T ss_pred CCCCCCCCCCCCCcCC------CCEEECCCCCcCCCCCCCCC---------CC--ccc-CCCCCCC----c--ccCCCCC
Confidence 554 3788888773 27899999999999997542 21 147 7788885 2 4444554
Q ss_pred ---CCCCC-CCC
Q psy14221 464 ---DLCIQ-CAP 471 (546)
Q Consensus 464 ---~~C~~-C~~ 471 (546)
..|+. |+.
T Consensus 616 ~~~~~C~~~C~~ 627 (687)
T 3k6s_B 616 PFGKNCSAACPG 627 (687)
T ss_dssp CCSSCSSSSCCC
T ss_pred CCCcccccccCC
Confidence 45553 553
No 20
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.45 E-value=1.7e-15 Score=140.94 Aligned_cols=151 Identities=21% Similarity=0.353 Sum_probs=111.2
Q ss_pred ccCCCCCCCCccccccCCCceEEcCCCccCC---CCCCCCCCC----CCCCCCCCCCCCCCC-CcCCCcEEecCCCCcCC
Q psy14221 251 KPCECNTSGSLGDECDSISGQCQCKENRAGR---TCNLALDCP----PCDCDPLGTLSVPQP-CHPVSGTCYCQPGVTGD 322 (546)
Q Consensus 251 ~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~---~C~~~~~C~----~~~C~~~g~c~~~~~-C~~~~~~C~C~~g~~G~ 322 (546)
.+.+|.+ |+|..+ .++|+|.|++||+|. .|+...+|. ..+|.++++|..... -.++.|+|.|++||+|.
T Consensus 9 ~~~pC~n-g~C~~~--~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 9 VDTICXN-GQLVQM--SNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp TTCCCBT-EEEEEC--SSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred CCCCCCC-CEeECC--CCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 4567874 477653 567999999999987 898777898 778999888833210 00157899999999998
Q ss_pred CCCcCCCCCCccCCCCCCCCCCCCCCCcceecC--CCCCeeeeCCCCCC-----CCCCcCCCCCcCCCCCCCCCCCC-CC
Q psy14221 323 RCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCD--VHTGQCSCKPNMTG-----LACDQCTEGHWGLQELGCASCEC-NA 394 (546)
Q Consensus 323 ~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~--~~~~~C~C~~g~~G-----~~C~~C~~g~~g~~~~~C~~~~C-~~ 394 (546)
.++- .+++|...+|.++++|...+. ..+++|.|++||+| ..|+. .+++.|.. +| .+
T Consensus 86 ~~~C--------~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~-------~~~~~C~~-~C~~~ 149 (186)
T 1z1y_A 86 EDTC--------VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX-------TGETACQL-XCNTD 149 (186)
T ss_dssp TTEE--------EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE-------EECCCCCC-CCCTT
T ss_pred CCCC--------CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE-------cCCCcccc-ccccc
Confidence 7642 357788888998886663221 23679999999998 55653 11356764 88 88
Q ss_pred CcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 395 VGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 395 ~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
+++|... ..+|+|.|++||+|..++.
T Consensus 150 ~~~C~n~--~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 150 NEVCXNV--EGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp TEEEEEE--TTEEEEEECTTCEEETTTT
T ss_pred CcceecC--CCCeeeECCCCCccCcccc
Confidence 8888665 5578999999999998874
No 21
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.39 E-value=7.3e-13 Score=117.55 Aligned_cols=122 Identities=22% Similarity=0.480 Sum_probs=85.7
Q ss_pred CCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCC---CC-CcCCCCCCCCCCCCCCCcccCCcc-----ccCCc
Q psy14221 337 NGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCT---EG-HWGLQELGCASCECNAVGSVNNSC-----DQITG 407 (546)
Q Consensus 337 ~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~---~g-~~g~~~~~C~~~~C~~~g~c~~~c-----~~~~~ 407 (546)
|+|.+.+|.++|+|...=....++|.|++||+|..|+.-. .. ..-..++.|...+|.++++|...- ...++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~ 80 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGY 80 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCE
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCe
Confidence 3577889999996554211146899999999999998521 11 111235678888999999886210 13578
Q ss_pred eEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCccc--CCCCeEeCCCCCccCCCCC
Q psy14221 408 QCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCS--EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 408 ~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~--~~~~~C~C~~g~~G~~C~~ 468 (546)
+|+|++||+|..|+. .++.|.. .+| .++++|. ..+|+|.|++||+|++|+.
T Consensus 81 ~C~C~~G~~G~~C~~--------~i~~C~~-~~C-~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 81 VCKCPRGFNGIHCQH--------NINECEV-EPC-KNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EEECCTTEESTTSCE--------ECCTTTT-CCS-CTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred EeECcCCCcCCCccc--------CCCcCCC-CCC-CCCCEeECCCCCeEeECCCCCccCCcee
Confidence 999999999999973 2234442 248 7889998 5678999999999999975
No 22
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.36 E-value=1.5e-14 Score=134.52 Aligned_cols=148 Identities=18% Similarity=0.277 Sum_probs=106.7
Q ss_pred CCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCC---CCCcCCCCcccCCCCCCCc----cCCCCCCCCccccccC
Q psy14221 195 YGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGA---RCERCKPLYYGDPRTGDCK----PCECNTSGSLGDECDS 267 (546)
Q Consensus 195 ~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~---~Ce~C~~G~~g~~~~~~C~----~~~C~~~g~c~~~c~~ 267 (546)
..+||.++ +|++ ....++|. |++||.|. .|+ .+++|. +.+|.++++|..+ .
T Consensus 9 ~~~pC~ng-~C~~--------~~g~~~C~-C~~G~~g~~~~~C~----------~id~C~~~~~~~~C~~~~~C~~~--~ 66 (186)
T 1z1y_A 9 VDTICXNG-QLVQ--------MSNHFXCM-CNEGLVHLSENTCE----------EXNECXXETLGXACGEFGQCIEN--P 66 (186)
T ss_dssp TTCCCBTE-EEEE--------CSSCEEEE-ECTTEEEEETTEEE----------ECCCCSGGGTTSEEETTEEEEEC--S
T ss_pred CCCCCCCC-EeEC--------CCCCeEeE-CCCCCccCCCCccC----------CCCcccCCCCCCCCCCCCEeecC--C
Confidence 45678754 7875 34456784 77777766 564 457887 6789988888764 3
Q ss_pred -----CCceEEcCCCccCCCCCC-CCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcC-----CCCCcCCCCCCccCC
Q psy14221 268 -----ISGQCQCKENRAGRTCNL-ALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTG-----DRCDQCDTGYWNFTV 336 (546)
Q Consensus 268 -----~~~~C~C~~g~~G~~C~~-~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G-----~~C~~C~~g~~g~~~ 336 (546)
++|+|+|++||+|..++- ..+|...+|.++++|.....-..+.++|.|++||+| ..|+. .++
T Consensus 67 ~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~-------~~~ 139 (186)
T 1z1y_A 67 DPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX-------TGE 139 (186)
T ss_dssp STTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE-------EEC
T ss_pred CCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE-------cCC
Confidence 678999999999985431 346888899998888310001125789999999998 66763 124
Q ss_pred CCCCCCCC-CCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 337 NGCTSCNC-NRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 337 ~~C~~~~C-~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
++|.. +| .++++|.++ ..+|+|.|++||+|..++.
T Consensus 140 ~~C~~-~C~~~~~~C~n~--~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 140 TACQL-XCNTDNEVCXNV--EGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp CCCCC-CCCTTTEEEEEE--TTEEEEEECTTCEEETTTT
T ss_pred Ccccc-cccccCcceecC--CCCeeeECCCCCccCcccc
Confidence 67874 89 888866654 5678999999999998874
No 23
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.07 E-value=4.2e-11 Score=97.29 Aligned_cols=85 Identities=18% Similarity=0.389 Sum_probs=68.1
Q ss_pred CceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCC-cCCCCCCccCCCCCCCCCCCCC
Q psy14221 269 SGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCD-QCDTGYWNFTVNGCTSCNCNRD 347 (546)
Q Consensus 269 ~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~-~C~~g~~g~~~~~C~~~~C~~~ 347 (546)
+|+|+|++||+|..|+. .+|...||.++. ..++|.|++||+ +|+ . ++++|.+.||.++
T Consensus 1 sy~C~C~~g~~g~~c~~-~~c~~~pC~n~~----------~~y~C~C~~G~~--~C~~~--------~~~~C~~~pC~ng 59 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQ-HQSWLRPVLRSN----------RVEYCWCNSGRA--QCHSV--------PVKSCSEPRCFNG 59 (91)
T ss_dssp CCCCCCBCSSSCCBCCS-SCEEEEECSSSS----------CEEEEECSSSCC--BCCEE--------CEEECSSCCSCTT
T ss_pred CeeeECCCCCcCCeECC-CcccCCccccCC----------CCcEeECCCCCc--ccccC--------cCCcccCCCCCCC
Confidence 47899999999999973 557777776542 678999999998 786 3 5688999999999
Q ss_pred CCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 348 GSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 348 g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
|+|...=....++|.|++||+|.+|+.
T Consensus 60 g~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 60 GTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp CEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred CEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 977654112678999999999999984
No 24
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.01 E-value=2.9e-10 Score=122.84 Aligned_cols=122 Identities=18% Similarity=0.342 Sum_probs=90.6
Q ss_pred CCCCCccCCCCCCCCccccccCCCceE-EcCCCccC--CCCCCCCCCCCCC--CCCCC---CCCCCCCCcCCCcEEe-cC
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQC-QCKENRAG--RTCNLALDCPPCD--CDPLG---TLSVPQPCHPVSGTCY-CQ 316 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C-~C~~g~~G--~~C~~~~~C~~~~--C~~~g---~c~~~~~C~~~~~~C~-C~ 316 (546)
.+++|...||.++++|..+ ..++|+| .|++||+| ..|+...+|...+ |.+++ +|.. ....|+|. |+
T Consensus 2 DIDeC~~nPC~~gg~C~n~-~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvN----t~gsY~C~~C~ 76 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSF-PDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVN----TQPGFHCLPCP 76 (634)
T ss_dssp --CGGGGCCSCTTCCEEEC-TTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEE----CSSSEEECCCC
T ss_pred cccccCCCCCCCCCEEecC-CCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceee----ccCceecccCC
Confidence 3567888899999988764 1234899 99999998 7999777898777 99988 7833 33789998 99
Q ss_pred CCCcCCCCCc------CCCCCCccCCCCCCC--CCCCCCCCcceecCC----CCCeeeeCCCCCC--CCCCc
Q psy14221 317 PGVTGDRCDQ------CDTGYWNFTVNGCTS--CNCNRDGSLHFSCDV----HTGQCSCKPNMTG--LACDQ 374 (546)
Q Consensus 317 ~g~~G~~C~~------C~~g~~g~~~~~C~~--~~C~~~g~c~~~C~~----~~~~C~C~~g~~G--~~C~~ 374 (546)
+||+|..|+. -..+..-..+++|.. .+|.++++|..+ . .+|+|.|++||+| ..|+.
T Consensus 77 ~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt--~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 77 PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL--GHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEEC--CTTCSSSEEEEECTTEEESSSSEEE
T ss_pred CCcccCccccccccccccCCCcccccccccCCCcccccCcccccc--ccccccceeeeccCCccccCccccc
Confidence 9999998761 001111225788874 589988866653 3 5789999999998 67763
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.00 E-value=1.3e-10 Score=94.35 Aligned_cols=86 Identities=19% Similarity=0.354 Sum_probs=67.4
Q ss_pred CcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCC
Q psy14221 310 SGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCAS 389 (546)
Q Consensus 310 ~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~ 389 (546)
+|+|+|++||+|..|+. ++|...||.++. ..++|.|++||+ .|+. .+++.|.+
T Consensus 1 sy~C~C~~g~~g~~c~~----------~~c~~~pC~n~~--------~~y~C~C~~G~~--~C~~-------~~~~~C~~ 53 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQ----------HQSWLRPVLRSN--------RVEYCWCNSGRA--QCHS-------VPVKSCSE 53 (91)
T ss_dssp CCCCCCBCSSSCCBCCS----------SCEEEEECSSSS--------CEEEEECSSSCC--BCCE-------ECEEECSS
T ss_pred CeeeECCCCCcCCeECC----------CcccCCccccCC--------CCcEeECCCCCc--cccc-------CcCCcccC
Confidence 47899999999998864 667777787642 568999999998 6761 13567888
Q ss_pred CCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 390 CECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 390 ~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
.+|.++|+|...-....++|.|++||+|.+|++
T Consensus 54 ~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 54 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp CCSCTTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred CCCCCCCEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 899999988765212578999999999999984
No 26
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.97 E-value=1.1e-10 Score=103.36 Aligned_cols=110 Identities=18% Similarity=0.363 Sum_probs=80.6
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccC---------CCCCCCCCCCCC---CCCCCCCCCCCCCCcCCCcEEecCCCCc
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAG---------RTCNLALDCPPC---DCDPLGTLSVPQPCHPVSGTCYCQPGVT 320 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G---------~~C~~~~~C~~~---~C~~~g~c~~~~~C~~~~~~C~C~~g~~ 320 (546)
.+|.++++|.. .++|+|++||+| ..|+...+|... +|.++++|.. ..+.|+|.|++||+
T Consensus 7 ~~C~~~~~C~~-----~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n----~~g~y~C~C~~Gy~ 77 (143)
T 2bou_A 7 RWCPQDSSCVN-----ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWN----TEGSYDCVCSPGYE 77 (143)
T ss_dssp TTCCTTEEESS-----SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEE----CSSCEEEEECTTEE
T ss_pred CcCCCCCEEcC-----CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEc----CCCCeEeECCCCcc
Confidence 47888887754 489999999998 578766778754 8988888843 23789999999999
Q ss_pred CCCCCc-CC--CCCCccCCCCCC--CCCCCCCCCcceecCCCCCeeeeCCCCCCCCCC
Q psy14221 321 GDRCDQ-CD--TGYWNFTVNGCT--SCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACD 373 (546)
Q Consensus 321 G~~C~~-C~--~g~~g~~~~~C~--~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~ 373 (546)
|..++. +. .+..-.++++|. ..+|.++++|.++ ..+|+|.|++||+|....
T Consensus 78 g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~--~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 78 PVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT--VGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp ETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC--SSCEEEECCSSSCBCTTC
T ss_pred cCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC--CCCEEeeCCCCcccCCCC
Confidence 986642 00 011112567887 3789988977664 577899999999998754
No 27
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.88 E-value=4.8e-10 Score=99.24 Aligned_cols=110 Identities=19% Similarity=0.390 Sum_probs=79.3
Q ss_pred CCCCCCCCCCCCCCCcCCCcEEecCCCCcCC---------CCCcCCCCCCccCCCCCCCC---CCCCCCCcceecCCCCC
Q psy14221 292 CDCDPLGTLSVPQPCHPVSGTCYCQPGVTGD---------RCDQCDTGYWNFTVNGCTSC---NCNRDGSLHFSCDVHTG 359 (546)
Q Consensus 292 ~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~---------~C~~C~~g~~g~~~~~C~~~---~C~~~g~c~~~C~~~~~ 359 (546)
.+|.++++| . ..++|.|++||+|. .|+ ++++|... +|.++++|.++ ..+|
T Consensus 7 ~~C~~~~~C------~-~~~~C~C~~G~~g~~~~~~~~~~~C~---------dideC~~~~~~~C~~~~~C~n~--~g~y 68 (143)
T 2bou_A 7 RWCPQDSSC------V-NATACRCNPGFSSFSEIITTPMETCD---------DINECATLSKVSCGKFSDCWNT--EGSY 68 (143)
T ss_dssp TTCCTTEEE------S-SSSCEEECTTEECSSSSBCSTTCCCE---------ECCGGGC----CCCTTEEEEEC--SSCE
T ss_pred CcCCCCCEE------c-CCCEEeCCCCCcCccccccCCCCcCC---------ccccccCCCCCCCCCCCEEEcC--CCCe
Confidence 468777776 2 34899999999984 553 56888764 79888866653 5678
Q ss_pred eeeeCCCCCCCCCCcCCC---CCcCCCCCCCC--CCCCCCCcccCCccccCCceEecCCCCcCCCCC
Q psy14221 360 QCSCKPNMTGLACDQCTE---GHWGLQELGCA--SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCD 421 (546)
Q Consensus 360 ~C~C~~g~~G~~C~~C~~---g~~g~~~~~C~--~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~ 421 (546)
+|.|++||+|..++.-.. +....+++.|. ..+|.++++|..+ ..+|+|.|++||+|....
T Consensus 69 ~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~--~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 69 DCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT--VGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp EEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC--SSCEEEECCSSSCBCTTC
T ss_pred EeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC--CCCEEeeCCCCcccCCCC
Confidence 999999999986652000 01111366676 3689888888765 568899999999998765
No 28
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.86 E-value=2.2e-09 Score=116.02 Aligned_cols=122 Identities=21% Similarity=0.384 Sum_probs=88.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCcEE-ecCCCCcC--CCCCcCCCCCCccCCCCCCCCC--CCCCC---CcceecCCCC
Q psy14221 287 LDCPPCDCDPLGTLSVPQPCHPVSGTC-YCQPGVTG--DRCDQCDTGYWNFTVNGCTSCN--CNRDG---SLHFSCDVHT 358 (546)
Q Consensus 287 ~~C~~~~C~~~g~c~~~~~C~~~~~~C-~C~~g~~G--~~C~~C~~g~~g~~~~~C~~~~--C~~~g---~c~~~C~~~~ 358 (546)
.+|...||.++++|..... ++|+| .|++||+| .+|+ ++++|...+ |.+++ +|.++ ..+
T Consensus 4 DeC~~nPC~~gg~C~n~~~---Gsy~C~~C~~GytGdg~~Ce---------DiDEC~~~p~~C~~gg~~~~CvNt--~gs 69 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPD---GSWSCGFCPVGFLGNGTHCE---------DLDECALVPDICFSTSKVPRCVNT--QPG 69 (634)
T ss_dssp CGGGGCCSCTTCCEEECTT---SCEEECCCCTTBCSCSSSCC---------BCCTTTTSCCCSCCCSSSCCEEEC--SSS
T ss_pred cccCCCCCCCCCEEecCCC---CCeECCcCCCccCCCCCCcc---------ccccccCCCCcccCCccccceeec--cCc
Confidence 3577789999998843321 34999 99999998 7786 578898777 99988 78764 567
Q ss_pred Ceee-eCCCCCCCCCCc------CCCCCcCCCCCCCCC--CCCCCCcccCCcc--ccCCceEecCCCCcC--CCCCC
Q psy14221 359 GQCS-CKPNMTGLACDQ------CTEGHWGLQELGCAS--CECNAVGSVNNSC--DQITGQCVCRKGVTG--RTCDK 422 (546)
Q Consensus 359 ~~C~-C~~g~~G~~C~~------C~~g~~g~~~~~C~~--~~C~~~g~c~~~c--~~~~~~C~C~~G~~G--~~C~~ 422 (546)
|+|. |++||+|..|+. -..+.....++.|.. .+|.++++|...- ...+|+|.|++||+| ..|++
T Consensus 70 Y~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 70 FHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp EEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred eecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCccccc
Confidence 8998 999999998761 001111123667874 5899888886651 015789999999998 77863
No 29
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.71 E-value=3.1e-09 Score=100.19 Aligned_cols=95 Identities=31% Similarity=0.807 Sum_probs=70.3
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCC----------CCC----CCCCCCCCCCCCCCCCcCCCcEEecCC
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLAL----------DCP----PCDCDPLGTLSVPQPCHPVSGTCYCQP 317 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~----------~C~----~~~C~~~g~c~~~~~C~~~~~~C~C~~ 317 (546)
...|+++|+|. .++|+|++||+|.+|+... .|. ..+|.++|+| ..++|.|.+
T Consensus 95 ~~~Csg~G~C~------~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C--------~~g~C~C~~ 160 (217)
T 2p28_B 95 RSLCHGKGFLE------CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC--------VCGQCLCHT 160 (217)
T ss_dssp -CTTTTSEEEE------TTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEE--------ETTEEEECC
T ss_pred CCccCCCceEE------CCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEE--------eCCceECCC
Confidence 34678888764 2799999999999998321 254 3567777766 347899999
Q ss_pred C------CcCCCCCcCCCCCCccCCCCCCCC---CCCCC--CCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 318 G------VTGDRCDQCDTGYWNFTVNGCTSC---NCNRD--GSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 318 g------~~G~~C~~C~~g~~g~~~~~C~~~---~C~~~--g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
| |+|.+|+. +++.|... +|.++ | +|. .++|.|.+||+|..|+.
T Consensus 161 gw~~~~~~~G~~Ce~--------~~~~C~~~~g~~C~~~~~G----~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 161 SDVPGKLIYGQYCEC--------DTINCERYNGQVCGGPGRG----LCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp CCSTTCCEESTTSCE--------ESSCSCEETTEETTCTTTE----EEE--TTEEEECTTEESTTSCE
T ss_pred CCCCcccEECCCccc--------CCccCCCCCCCCCCCCCCc----EEe--CCeeECCCCCccCCcCC
Confidence 9 69999984 33456543 68777 7 664 37999999999999974
No 30
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.70 E-value=7.7e-09 Score=105.23 Aligned_cols=97 Identities=26% Similarity=0.631 Sum_probs=74.2
Q ss_pred CCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCC--------CCCcccCCcccCCCCcc---------cCC
Q psy14221 389 SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFS--------VNGCTECASCEQSGMVC---------SEE 451 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~--------~~~C~~c~~C~~~~g~C---------~~~ 451 (546)
.+.|+.++.....++...+.|.|+++|+|.+|++|.++|++.+ ...|.+|+ |+..+..| ...
T Consensus 254 ~C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~-Cn~~g~~C~~d~~~~~c~~~ 332 (375)
T 4aqt_A 254 RCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCD-CNGRSQECYFDPELYRSTGH 332 (375)
T ss_dssp EECCTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCC-GGGSCSCEEECHHHHHHSSC
T ss_pred eecCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCc-CcCCCCCcccccccCccCCC
Confidence 4567666655444445577899999999999999999999875 34688876 73333333 246
Q ss_pred CCeEe-CCCCCccCCCCCCCCCCCCCCCCCCCCCCc
Q psy14221 452 SGQCV-CPPLTRGDLCIQCAPNSYGYRPLLGCQPCR 486 (546)
Q Consensus 452 ~~~C~-C~~g~~G~~C~~C~~~~~g~~~~~~C~~c~ 486 (546)
+++|. |+++|+|.+|++|++|||+.....+|++|.
T Consensus 333 ~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~~~C~pCa 368 (375)
T 4aqt_A 333 GGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPAA 368 (375)
T ss_dssp CEEECSCTTTEESTTSCEECSSEECCTTCSSCEEC-
T ss_pred CCCCCCCCCCCcCCCCCCCCcCcccCcCCCCCcCCc
Confidence 78995 999999999999999999988777788773
No 31
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.61 E-value=1.2e-08 Score=96.06 Aligned_cols=102 Identities=30% Similarity=0.752 Sum_probs=70.5
Q ss_pred CCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccC--CCCCC----CCCCCCCCCcceecCCCCCeeeeCC
Q psy14221 292 CDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFT--VNGCT----SCNCNRDGSLHFSCDVHTGQCSCKP 365 (546)
Q Consensus 292 ~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~--~~~C~----~~~C~~~g~c~~~C~~~~~~C~C~~ 365 (546)
..|+++|+| ..+.|.|.+||+|.+|+ |+.+.+... ...|. ..+|.++| +|. .++|.|.+
T Consensus 96 ~~Csg~G~C--------~~g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G----~C~--~g~C~C~~ 160 (217)
T 2p28_B 96 SLCHGKGFL--------ECGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLG----DCV--CGQCLCHT 160 (217)
T ss_dssp CTTTTSEEE--------ETTEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTE----EEE--TTEEEECC
T ss_pred CccCCCceE--------ECCEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCC----EEe--CCceECCC
Confidence 356777766 34899999999999998 443322110 01243 45788877 664 47899999
Q ss_pred C------CCCCCCCcCCCCCcCCCCCCCCCC---CCCCC--cccCCccccCCceEecCCCCcCCCCCC
Q psy14221 366 N------MTGLACDQCTEGHWGLQELGCASC---ECNAV--GSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 366 g------~~G~~C~~C~~g~~g~~~~~C~~~---~C~~~--g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
| |+|..|+. +...|... +|.++ |+|. .++|.|.+||+|..|+.
T Consensus 161 gw~~~~~~~G~~Ce~--------~~~~C~~~~g~~C~~~~~G~C~------~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 161 SDVPGKLIYGQYCEC--------DTINCERYNGQVCGGPGRGLCF------CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp CCSTTCCEESTTSCE--------ESSCSCEETTEETTCTTTEEEE------TTEEEECTTEESTTSCE
T ss_pred CCCCcccEECCCccc--------CCccCCCCCCCCCCCCCCcEEe------CCeeECCCCCccCCcCC
Confidence 9 59999983 12345432 68776 7663 36999999999999974
No 32
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.60 E-value=3.1e-08 Score=101.13 Aligned_cols=75 Identities=29% Similarity=0.741 Sum_probs=62.4
Q ss_pred CCcEEecCCCCcCCCCCcCCCCCCccC--------CCCCCCCCCCCCCC-cce--------------ecCCCCCeee-eC
Q psy14221 309 VSGTCYCQPGVTGDRCDQCDTGYWNFT--------VNGCTSCNCNRDGS-LHF--------------SCDVHTGQCS-CK 364 (546)
Q Consensus 309 ~~~~C~C~~g~~G~~C~~C~~g~~g~~--------~~~C~~~~C~~~g~-c~~--------------~C~~~~~~C~-C~ 364 (546)
..++|.|+++++|.+||+|++|||+.. .+.|.+++|+++++ |.. .+...+++|. |+
T Consensus 284 ~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~ 363 (403)
T 2y38_A 284 FRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQ 363 (403)
T ss_dssp TCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCC
T ss_pred cceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCc
Confidence 357899999999999999999999874 25799999998774 320 0124578996 99
Q ss_pred CCCCCCCCCcCCCCCcCCC
Q psy14221 365 PNMTGLACDQCTEGHWGLQ 383 (546)
Q Consensus 365 ~g~~G~~C~~C~~g~~g~~ 383 (546)
.+++|.+|+.|++|||+..
T Consensus 364 ~nt~G~~CErC~~GYyg~p 382 (403)
T 2y38_A 364 HHTTGINCERCLPGFFRAP 382 (403)
T ss_dssp SSEESTTSCEECTTCEECT
T ss_pred CcCcCCCCCcCCCCccCCC
Confidence 9999999999999999987
No 33
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.59 E-value=1.7e-08 Score=102.66 Aligned_cols=98 Identities=26% Similarity=0.685 Sum_probs=75.2
Q ss_pred CCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCC--------CCCCCCCCCCCCcccC------CccccCC
Q psy14221 341 SCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQ--------ELGCASCECNAVGSVN------NSCDQIT 406 (546)
Q Consensus 341 ~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~--------~~~C~~~~C~~~g~c~------~~c~~~~ 406 (546)
.+.|+.+++....+....+.|.|+++|+|.+|++|.+||++.. ...|+++.|..+++-- ..++..+
T Consensus 254 ~C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~ 333 (375)
T 4aqt_A 254 RCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG 333 (375)
T ss_dssp EECCTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCC
T ss_pred eecCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCC
Confidence 5678877765544455667899999999999999999999874 4468888887766421 1344568
Q ss_pred ceEe-cCCCCcCCCCCCCCCCCCCCCC-CCcccC
Q psy14221 407 GQCV-CRKGVTGRTCDKCRPDYFGFSV-NGCTEC 438 (546)
Q Consensus 407 ~~C~-C~~G~~G~~C~~C~~~~~g~~~-~~C~~c 438 (546)
|+|. |++||+|.+|++|+++||+.+. ..|++|
T Consensus 334 G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~~~C~pC 367 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCERCRENFFRLGNTEACSPA 367 (375)
T ss_dssp EEECSCTTTEESTTSCEECSSEECCTTCSSCEEC
T ss_pred CCCCCCCCCCcCCCCCCCCcCcccCcCCCCCcCC
Confidence 9995 9999999999999999998762 345554
No 34
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.58 E-value=1.8e-09 Score=97.69 Aligned_cols=120 Identities=20% Similarity=0.373 Sum_probs=78.0
Q ss_pred CCCCCc-cCCCCCCCCccccccCCCceEEcCCCcc----CCCCCCCCC--CCC--CCC--CCCCCCCCCCCCcCCCcEEe
Q psy14221 246 RTGDCK-PCECNTSGSLGDECDSISGQCQCKENRA----GRTCNLALD--CPP--CDC--DPLGTLSVPQPCHPVSGTCY 314 (546)
Q Consensus 246 ~~~~C~-~~~C~~~g~c~~~c~~~~~~C~C~~g~~----G~~C~~~~~--C~~--~~C--~~~g~c~~~~~C~~~~~~C~ 314 (546)
++++|. +.+|. +++|..+ .++|+|.|++||+ |..|+...+ |.. .+| .++++|.....-....++|.
T Consensus 2 dideC~~~~~C~-~~~C~n~--~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~ 78 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNT--PGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC 78 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEE--TTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred ccccCCCCCCCC-CCEeECC--CCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence 456776 47886 5777664 6789999999998 888985444 652 223 34555522110000268899
Q ss_pred cCCCCc-CCCCCcCC------------C--CCCcc-------CCCCCCC--CCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 315 CQPGVT-GDRCDQCD------------T--GYWNF-------TVNGCTS--CNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 315 C~~g~~-G~~C~~C~------------~--g~~g~-------~~~~C~~--~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
|++||+ |..|+.|. + ||.+. ++++|.. .+|.+ ++|+++ ..+|+|.|++||+|.
T Consensus 79 C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~--~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 79 CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINT--FGSFQCRCPTGYYLN 155 (162)
T ss_dssp TTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEEC--SSCEEEECCTTCCBC
T ss_pred CCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcC--CCCEEeeCCCCccCC
Confidence 999998 77787543 3 77663 5678874 45875 677664 678999999999987
Q ss_pred C
Q psy14221 371 A 371 (546)
Q Consensus 371 ~ 371 (546)
.
T Consensus 156 ~ 156 (162)
T 1uzk_A 156 E 156 (162)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.54 E-value=7.5e-09 Score=88.26 Aligned_cols=102 Identities=23% Similarity=0.429 Sum_probs=71.2
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCC---CCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCc--
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLA---LDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVT-- 320 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~---~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~-- 320 (546)
++++|.+.+|.+ +|..+ ..++|+|+|++||+|..++.. ..|...+|. ++|.. .+.|+|.|++||+
T Consensus 3 dideC~~~pC~~--~C~~~-~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~-----~~~y~C~C~~Gy~~~ 72 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPL-DQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDP-----NTQASCECPEGYILD 72 (118)
T ss_dssp CCCGGGGCCCSS--EEEEC-SSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECT-----TSTTCEECCTTEEEE
T ss_pred ccccCCCCCCCC--CCCCC-CCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccC-----CCCeEeECCCCccCC
Confidence 457787788874 56542 146799999999999854310 123334443 45522 1679999999999
Q ss_pred -CCCCCcCCCCCCccCCCCCCC-CCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 321 -GDRCDQCDTGYWNFTVNGCTS-CNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 321 -G~~C~~C~~g~~g~~~~~C~~-~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
|..|+ ++++|.. .+| +++|.++ ..+|+|.|++||+|.
T Consensus 73 ~g~~C~---------dideC~~~~~C--~~~C~n~--~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 73 DGFICT---------DIDECENGGFC--SGVCHNL--PGTFECICGPDSALA 111 (118)
T ss_dssp TTTEEE---------ECCHHHHCSSC--SSEEEEC--SSSEEEEECSSSSCE
T ss_pred CCCccc---------cccccCCCCCC--cCeEEeC--CCCEEEECCCCCccC
Confidence 77784 5788876 788 5766653 578999999999875
No 36
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.48 E-value=9.7e-08 Score=97.51 Aligned_cols=82 Identities=29% Similarity=0.808 Sum_probs=56.7
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCceeCCCC--CCCc------------------CCCCCcccCCCCC
Q psy14221 174 GCASCEDGYIGDHCESCDAGYYGNPTE-----LGGSCVPCSCG--GGPC------------------DASTGECVQCRGN 228 (546)
Q Consensus 174 ~C~~C~~g~~G~~C~~~~~~c~~~~c~-----~~g~C~~C~C~--~~~C------------------~~~~g~C~~C~~g 228 (546)
+| .|.++++|.+||+|.+++++.|.. ....|.+|.|+ ...| ...+|+|+.|+++
T Consensus 287 ~C-~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n 365 (403)
T 2y38_A 287 QC-ACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365 (403)
T ss_dssp EE-CCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred Ee-ECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence 35 566666666666666666666542 23578888887 3346 2457899779999
Q ss_pred cCCCCCCcCCCCcccCCCCCCCccCCCC
Q psy14221 229 TEGARCERCKPLYYGDPRTGDCKPCECN 256 (546)
Q Consensus 229 ~~G~~Ce~C~~G~~g~~~~~~C~~~~C~ 256 (546)
+.|.+||+|.+||||++....-.+.+|.
T Consensus 366 t~G~~CErC~~GYyg~p~~~~~~~~~C~ 393 (403)
T 2y38_A 366 TTGINCERCLPGFFRAPDQPLDSPHVCR 393 (403)
T ss_dssp EESTTSCEECTTCEECTTSCTTSTTSEE
T ss_pred CcCCCCCcCCCCccCCCCCCCCCCCccc
Confidence 9999999999999999844333344443
No 37
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.45 E-value=3.9e-09 Score=93.80 Aligned_cols=131 Identities=21% Similarity=0.399 Sum_probs=81.6
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCC
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCD 325 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~ 325 (546)
++++|.+.||.+ ++|..+ .++|+|+|++||+|..+. .+| . ......|.++|.|..|+
T Consensus 3 dideC~~~pC~n-g~C~n~--~g~y~C~C~~G~~g~~~~-------------~~C------~-~~~~~~C~~~~~g~~C~ 59 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNS--PGSFICECSSESTLDPTK-------------TIC------I-ETIKGTCWQTVIDGRCE 59 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEE--TTEEEEECCTTEEECTTS-------------SBE------E-ECCCEEEEEEEETTEEE
T ss_pred cCccCcCCCCCC-CEeECC--CCCEEeECCCCcccCCCC-------------Cee------c-CCCCCcccCCCCCCccc
Confidence 567888889975 678664 678999999999987543 112 1 11123566778887776
Q ss_pred cCCCCCCccCCCCCCCC-C-CCCCCCc-ceecCCCCCeeeeCCCCC---CCCCCcCCCCCcCCCCCCCCC--CCCCCCcc
Q psy14221 326 QCDTGYWNFTVNGCTSC-N-CNRDGSL-HFSCDVHTGQCSCKPNMT---GLACDQCTEGHWGLQELGCAS--CECNAVGS 397 (546)
Q Consensus 326 ~C~~g~~g~~~~~C~~~-~-C~~~g~c-~~~C~~~~~~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~~--~~C~~~g~ 397 (546)
. +++.|... . +...+.. ...|..-.+.|.|++||+ |..|+. ++.|.. .+|.+ ++
T Consensus 60 ~--------~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~d---------ideC~~~~~~C~~-g~ 121 (147)
T 2w86_A 60 I--------NINGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCED---------IDECEVFPGVCKN-GL 121 (147)
T ss_dssp E--------EEEEEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEE---------CCHHHHSTTCSSS-SE
T ss_pred c--------CCCccccCCccccCcCcccCCCcccCCCcccCCCccccCCCCccCc---------cccccCCCCCCCC-CE
Confidence 4 23332210 0 1111100 011211236789999995 887763 677873 44885 47
Q ss_pred cCCccccCCceEecCCCCcCCC
Q psy14221 398 VNNSCDQITGQCVCRKGVTGRT 419 (546)
Q Consensus 398 c~~~c~~~~~~C~C~~G~~G~~ 419 (546)
|..+ ..+|+|.|++||+|..
T Consensus 122 C~n~--~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 122 CVNT--RGSFKCQCPSGMTLDA 141 (147)
T ss_dssp EEEE--TTEEEEECCTTCCBCT
T ss_pred EECC--CCCEEeeCCCCCccCC
Confidence 7665 5689999999999864
No 38
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.40 E-value=2.5e-08 Score=90.12 Aligned_cols=117 Identities=24% Similarity=0.479 Sum_probs=73.9
Q ss_pred CCCCCC-CCCCCCCCCcceecCCCCCeeeeCCCCC----CCCCCcCCCCCcCCCCCC--CCC--CCC--CCCcccCCccc
Q psy14221 335 TVNGCT-SCNCNRDGSLHFSCDVHTGQCSCKPNMT----GLACDQCTEGHWGLQELG--CAS--CEC--NAVGSVNNSCD 403 (546)
Q Consensus 335 ~~~~C~-~~~C~~~g~c~~~C~~~~~~C~C~~g~~----G~~C~~C~~g~~g~~~~~--C~~--~~C--~~~g~c~~~c~ 403 (546)
++++|. +.+|. +++|+++ ..+|+|.|++||+ |..|+. ++. |.. .+| .++++|...-.
T Consensus 2 dideC~~~~~C~-~~~C~n~--~gsy~C~C~~Gy~~~~~g~~C~d---------~~~~~C~~~~~~c~~~~~~~C~~~~~ 69 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNT--PGSYICDCPPDFELNPTRVGCVD---------TRSGNCYLDIRPRGDNGDTACSNEIG 69 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEE--TTEEEEECCTTCEECTTSSBEEC---------CCCEEEEEEC----------CEEEEE
T ss_pred ccccCCCCCCCC-CCEeECC--CCCEEEeCCCCCeECCCCCcccC---------CCCCcccCCCcccCCCCCCcccCCcC
Confidence 568887 47886 5777664 5789999999998 777763 222 542 122 23455543311
Q ss_pred --cCCceEecCCCCc-CCCCCCCC------------C--CCCCC-------CCCCcccC-CcccCCCCccc--CCCCeEe
Q psy14221 404 --QITGQCVCRKGVT-GRTCDKCR------------P--DYFGF-------SVNGCTEC-ASCEQSGMVCS--EESGQCV 456 (546)
Q Consensus 404 --~~~~~C~C~~G~~-G~~C~~C~------------~--~~~g~-------~~~~C~~c-~~C~~~~g~C~--~~~~~C~ 456 (546)
...++|.|++||+ |..|+.|+ . +|.+. .+++|..- .+| .+ ++|. ..+|+|.
T Consensus 70 ~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C-~~-g~C~n~~gsy~C~ 147 (162)
T 1uzk_A 70 VGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLC-QG-GKCINTFGSFQCR 147 (162)
T ss_dssp EEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGG-BT-SEEEECSSCEEEE
T ss_pred CcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCc-CC-CEeEcCCCCEEee
Confidence 1157899999998 87887544 2 55543 24455431 247 44 6898 6789999
Q ss_pred CCCCCccCC
Q psy14221 457 CPPLTRGDL 465 (546)
Q Consensus 457 C~~g~~G~~ 465 (546)
|++||+|..
T Consensus 148 C~~Gy~g~~ 156 (162)
T 1uzk_A 148 CPTGYYLNE 156 (162)
T ss_dssp CCTTCCBCT
T ss_pred CCCCccCCC
Confidence 999999865
No 39
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.34 E-value=1.4e-07 Score=96.74 Aligned_cols=121 Identities=26% Similarity=0.525 Sum_probs=36.5
Q ss_pred ceeCCCC--CCCcCCCC--CcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCCCceEE-cCCCcc
Q psy14221 205 CVPCSCG--GGPCDAST--GECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSISGQCQ-CKENRA 279 (546)
Q Consensus 205 C~~C~C~--~~~C~~~~--g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~~~~C~-C~~g~~ 279 (546)
.-+|.|+ ...|+... ++|. |++++.|.+||+|.+||++.+... +..+. .-....+.|+ |+-++.
T Consensus 294 ~g~C~CnGHas~C~~~~g~~~C~-C~~~ttG~~CE~C~pgy~~~P~~~---------gt~~p-~~~g~~~~C~pC~Cn~~ 362 (426)
T 3zyj_B 294 RGRCKCNLHATVCVYDNSKLTCE-CEHNTTGPDCGKCKKNYQGRPWSP---------GSYLP-IPKGAANACIPSISSIG 362 (426)
T ss_dssp EEEECCSSSCSCEEEETTEEEEC-CCTTEESSSSCEECTTCCSSCCCC---------CBCCS-SSSCBCCCCCCCCC---
T ss_pred cccCcCCCchhhcCCCCCCceee-CCCCCcCCCccccccccccCcccC---------Ccccc-cCCCCCCcccCCCCCCC
Confidence 3457787 45786544 4896 999999999999999999865211 10000 0001223442 333445
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCC
Q psy14221 280 GRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTG 359 (546)
Q Consensus 280 G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~ 359 (546)
|..|+.. ..+|.|+|+|.. .. +|.|++||+|..|+. ++|+++| +|+..+|
T Consensus 363 g~~CD~~----t~~C~ngg~C~~------~~-~C~C~~G~~G~~Ce~---------------c~C~~~g----~C~~~~G 412 (426)
T 3zyj_B 363 TNVCDNE----LLHCQNGGTCHN------NV-RCLCPAAYTGILCEK---------------LRCEEAG----SCGSDSG 412 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccccC----cccCCCCCCcCC------CC-CCcCCCCCcCCCCcC---------------CCCCCCC----cccCCCC
Confidence 6666543 247888888732 22 899999999988875 4688888 6777888
Q ss_pred eeeeCCC
Q psy14221 360 QCSCKPN 366 (546)
Q Consensus 360 ~C~C~~g 366 (546)
+|.=+.|
T Consensus 413 qc~~~~~ 419 (426)
T 3zyj_B 413 QGAPPHG 419 (426)
T ss_dssp -------
T ss_pred ccCCCCC
Confidence 8875544
No 40
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.26 E-value=5.8e-08 Score=82.72 Aligned_cols=104 Identities=20% Similarity=0.362 Sum_probs=66.0
Q ss_pred CCCCCCCCCCCCCCCceeCCCCCCCcC-CCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCccCCCCCCCCccccccCC
Q psy14221 190 CDAGYYGNPTELGGSCVPCSCGGGPCD-ASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCKPCECNTSGSLGDECDSI 268 (546)
Q Consensus 190 ~~~~c~~~~c~~~g~C~~C~C~~~~C~-~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~~~~C~~~g~c~~~c~~~ 268 (546)
++++|..+||.+ +|++ . ...++|. |++||.|..++. +...+.|...+|. +.|.. .+
T Consensus 3 dideC~~~pC~~--~C~~--------~~~g~y~C~-C~~Gy~g~~~~~-------~~C~~~C~~~~C~--~~C~~---~~ 59 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQP--------LDQTSYLCV-CAEGFAPIPHEP-------HRCQMFCNQTACP--ADCDP---NT 59 (118)
T ss_dssp CCCGGGGCCCSS--EEEE--------CSSSCEEEE-CCTTEEEETTEE-------EEEEECCCSSEEE--CEECT---TS
T ss_pred ccccCCCCCCCC--CCCC--------CCCCCEEeE-CCCCccccCCCC-------CccccccCCCCCC--CcccC---CC
Confidence 467788888874 6765 2 3345663 666666554320 0011123333443 34433 36
Q ss_pred CceEEcCCCcc---CCCCCCCCCCCC-CCCCCCCCCCCCCCCcCCCcEEecCCCCcCC
Q psy14221 269 SGQCQCKENRA---GRTCNLALDCPP-CDCDPLGTLSVPQPCHPVSGTCYCQPGVTGD 322 (546)
Q Consensus 269 ~~~C~C~~g~~---G~~C~~~~~C~~-~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~ 322 (546)
.++|.|++||+ |..|+...+|.. .+| +++|.. ..++|+|.|++||+|.
T Consensus 60 ~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n----~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 60 QASCECPEGYILDDGFICTDIDECENGGFC--SGVCHN----LPGTFECICGPDSALA 111 (118)
T ss_dssp TTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEE----CSSSEEEEECSSSSCE
T ss_pred CeEeECCCCccCCCCCccccccccCCCCCC--cCeEEe----CCCCEEEECCCCCccC
Confidence 78999999999 888976666875 788 567733 2378999999999874
No 41
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.16 E-value=4.1e-07 Score=80.06 Aligned_cols=76 Identities=22% Similarity=0.522 Sum_probs=55.7
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCc---ccCCccccC-CceEe
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVG---SVNNSCDQI-TGQCV 410 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g---~c~~~c~~~-~~~C~ 410 (546)
++++|.+.+|.++|+|.+. ..+|+|.|++||+|..|+. .++.|..+++.+++ +|... .. +|+|.
T Consensus 46 did~C~~~pC~n~g~C~~~--~g~y~C~C~~G~~G~~C~~--------~~~~c~~c~~~~~~C~~~C~~~--~g~~y~C~ 113 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQ--LQSYICFCLPAFEGRNCET--------HKDDQLICVNENGGCEQYCSDH--TGTKRSCR 113 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEE--TTEEEEECCTTEESTTSCE--------EGGGCCSTTTGGGGCSSEEECC--TTSCCEEE
T ss_pred ccCcCcCCCcCCCCEEeCC--CCCEEeeCCCCccCCcccc--------CccccccccCCCCCccCEeECC--CCCCEEEE
Confidence 5688999999999977664 5678999999999999984 12334444555444 44433 44 78999
Q ss_pred cCCCCc----CCCCCC
Q psy14221 411 CRKGVT----GRTCDK 422 (546)
Q Consensus 411 C~~G~~----G~~C~~ 422 (546)
|++||+ |..|+.
T Consensus 114 C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 114 CHEGYSLLADGVSCTP 129 (142)
T ss_dssp CCTTEEECTTSSCEEE
T ss_pred CCCCceECCCCCCCCC
Confidence 999999 888763
No 42
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.16 E-value=1.3e-07 Score=83.77 Aligned_cols=125 Identities=22% Similarity=0.399 Sum_probs=78.5
Q ss_pred CCCCCccCCCCCCCCCCCcccCCCC--eeecCCCccCCCCCcCCCccccCCcccCCCCCCCCCCCCCCCCCCCCCC----
Q psy14221 124 PNGSCEPCNCSPYGSVSDECHEESG--QCNCRIGITGRDCSQCEPRHILTSRGCASCEDGYIGDHCESCDAGYYGN---- 197 (546)
Q Consensus 124 ~~~~C~~~~C~~~~~~~~~C~~~~g--~C~C~~G~~G~~C~~C~~~C~~~~~~C~~C~~g~~G~~C~~~~~~c~~~---- 197 (546)
++++|+..+|.+ ++|.+..+ +|.|++||+|..+. .+|.. .... .|.++|.|..|+..++++...
T Consensus 3 dideC~~~pC~n-----g~C~n~~g~y~C~C~~G~~g~~~~---~~C~~-~~~~-~C~~~~~g~~C~~~~~~c~~~~~C~ 72 (147)
T 2w86_A 3 DIDECESSPCIN-----GVCKNSPGSFICECSSESTLDPTK---TICIE-TIKG-TCWQTVIDGRCEININGATLKSQCC 72 (147)
T ss_dssp CCCGGGGCCSBT-----SEEEEETTEEEEECCTTEEECTTS---SBEEE-CCCE-EEEEEEETTEEEEEEEEEECHHHHH
T ss_pred cCccCcCCCCCC-----CEeECCCCCEEeECCCCcccCCCC---CeecC-CCCC-cccCCCCCCccccCCCccccCCccc
Confidence 466787777853 58876544 89999999997764 33433 1123 567788888887655444211
Q ss_pred ---CCCCCCCceeCCCCCCCcCCCCCcccCCCCCcC---CCCCCcCCCCcccCCCCCCCcc--CCCCCCCCccccccCCC
Q psy14221 198 ---PTELGGSCVPCSCGGGPCDASTGECVQCRGNTE---GARCERCKPLYYGDPRTGDCKP--CECNTSGSLGDECDSIS 269 (546)
Q Consensus 198 ---~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~---G~~Ce~C~~G~~g~~~~~~C~~--~~C~~~g~c~~~c~~~~ 269 (546)
+...++.|.. -...|+ |++||. |.+|+ ++++|.. .+|.+ ++|..+ .++
T Consensus 73 ~~~g~~~g~~C~~----------c~~~C~-C~~Gy~~~~g~~C~----------dideC~~~~~~C~~-g~C~n~--~g~ 128 (147)
T 2w86_A 73 SSLGAAWGSPCTL----------CQVDPI-CGKGYSRIKGTQCE----------DIDECEVFPGVCKN-GLCVNT--RGS 128 (147)
T ss_dssp TTTCSEETTTTEE----------CCCCTT-TCTTEEEEETTEEE----------ECCHHHHSTTCSSS-SEEEEE--TTE
T ss_pred cCcCcccCCCccc----------CCCccc-CCCccccCCCCccC----------ccccccCCCCCCCC-CEEECC--CCC
Confidence 1111222322 124563 777773 66664 5778864 44875 477664 678
Q ss_pred ceEEcCCCccCCC
Q psy14221 270 GQCQCKENRAGRT 282 (546)
Q Consensus 270 ~~C~C~~g~~G~~ 282 (546)
|+|.|++||+|..
T Consensus 129 y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 129 FKCQCPSGMTLDA 141 (147)
T ss_dssp EEEECCTTCCBCT
T ss_pred EEeeCCCCCccCC
Confidence 9999999999863
No 43
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.15 E-value=4.8e-07 Score=92.68 Aligned_cols=97 Identities=21% Similarity=0.542 Sum_probs=26.1
Q ss_pred CcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeCCCCCCCcCCCCCcccCCCCCcCCCCCCcCCCCcccCCCCCCCc
Q psy14221 172 SRGCASCEDGYIGDHCESCDAGYYGNPTELGGSCVPCSCGGGPCDASTGECVQCRGNTEGARCERCKPLYYGDPRTGDCK 251 (546)
Q Consensus 172 ~~~C~~C~~g~~G~~C~~~~~~c~~~~c~~~g~C~~C~C~~~~C~~~~g~C~~C~~g~~G~~Ce~C~~G~~g~~~~~~C~ 251 (546)
.++| .|+++|+|++||+|.+++++.|+.++..+..- ....+.|+.|.-++.|..|+. .
T Consensus 312 ~~~C-~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~-------~g~~~~C~pC~Cn~~g~~CD~---------~----- 369 (426)
T 3zyj_B 312 KLTC-ECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIP-------KGAANACIPSISSIGTNVCDN---------E----- 369 (426)
T ss_dssp EEEE-CCCTTEESSSSCEECTTCCSSCCCCCBCCSSS-------SCBCCCCCCCCC------------------------
T ss_pred Ccee-eCCCCCcCCCccccccccccCcccCCcccccC-------CCCCCcccCCCCCCCcCcccc---------C-----
Confidence 3566 67777777777777777777777654321100 011233433444445555542 1
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCCCCCC
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPLGTLS 301 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~ 301 (546)
..+|.++|+|... . +|+|++||+|..|+. ++|.++|+|.
T Consensus 370 t~~C~ngg~C~~~----~-~C~C~~G~~G~~Ce~------c~C~~~g~C~ 408 (426)
T 3zyj_B 370 LLHCQNGGTCHNN----V-RCLCPAAYTGILCEK------LRCEEAGSCG 408 (426)
T ss_dssp --------------------------------------------------
T ss_pred cccCCCCCCcCCC----C-CCcCCCCCcCCCCcC------CCCCCCCccc
Confidence 2366666666442 2 777777777777653 4566666663
No 44
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.15 E-value=1.3e-06 Score=69.03 Aligned_cols=72 Identities=19% Similarity=0.407 Sum_probs=53.7
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCcCCCcEEecCCCCc--CCCCCcCCCCCCccCCCCCC-CCCCCCCCCcceecCCCC
Q psy14221 283 CNLALDCPP-CDCDPLGTLSVPQPCHPVSGTCYCQPGVT--GDRCDQCDTGYWNFTVNGCT-SCNCNRDGSLHFSCDVHT 358 (546)
Q Consensus 283 C~~~~~C~~-~~C~~~g~c~~~~~C~~~~~~C~C~~g~~--G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~C~~~~ 358 (546)
|+..++|.. .+|.+ ++|... .++|+|.|++||+ |..|+ ++++|. ..+|.+ ++|.++ ..+
T Consensus 2 C~dideC~~~~~C~~-g~C~n~----~g~y~C~C~~Gy~~~g~~C~---------dideC~~~~~C~~-~~C~n~--~g~ 64 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINT----DGSYRCECPFGYILAGNECV---------DTDECSVGNPCGN-GTCKNV--IGG 64 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCC----SSCCCEECCTTEEEETTEEE---------ECCGGGTCCTTSS-SCEEEC--SSS
T ss_pred CCccccCCCCCCcCC-CEEEec----CCCEEEECCCCeECCCCccC---------CcccccCCCCCCC-CEeECC--CCC
Confidence 344456764 77875 677432 3789999999997 88885 578887 678876 677664 577
Q ss_pred CeeeeCCCCCCCC
Q psy14221 359 GQCSCKPNMTGLA 371 (546)
Q Consensus 359 ~~C~C~~g~~G~~ 371 (546)
|+|.|++||+|..
T Consensus 65 y~C~C~~G~~g~~ 77 (82)
T 1emn_A 65 FECTCEEGFEPGP 77 (82)
T ss_dssp EEECCSSSSCCCS
T ss_pred EEeECCCCeEeCC
Confidence 8999999999863
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.14 E-value=4.5e-07 Score=79.82 Aligned_cols=75 Identities=27% Similarity=0.469 Sum_probs=58.8
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCC-CCCCCCCCCCCC---CCCCCCCCcCC-CcEEecCCCCc
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLA-LDCPPCDCDPLG---TLSVPQPCHPV-SGTCYCQPGVT 320 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~-~~C~~~~C~~~g---~c~~~~~C~~~-~~~C~C~~g~~ 320 (546)
++++|.+.+|.++++|..+ .+.|+|.|++||+|..|+.. ..|.++++.+++ +|... .+ +|+|.|++||+
T Consensus 46 did~C~~~pC~n~g~C~~~--~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~----~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQ--LQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDH----TGTKRSCRCHEGYS 119 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEE--TTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECC----TTSCCEEECCTTEE
T ss_pred ccCcCcCCCcCCCCEEeCC--CCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECC----CCCCEEEECCCCce
Confidence 5678989999999988764 56799999999999999963 557666666655 55322 25 89999999999
Q ss_pred ----CCCCCc
Q psy14221 321 ----GDRCDQ 326 (546)
Q Consensus 321 ----G~~C~~ 326 (546)
|.+|+.
T Consensus 120 l~~dG~~C~~ 129 (142)
T 2c4f_L 120 LLADGVSCTP 129 (142)
T ss_dssp ECTTSSCEEE
T ss_pred ECCCCCCCCC
Confidence 888864
No 46
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.12 E-value=1e-06 Score=77.90 Aligned_cols=73 Identities=23% Similarity=0.532 Sum_probs=55.8
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCC--CCCCCCCC-CCCCCCcCCCcEEecCCCCc--
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPC--DCDPLGTL-SVPQPCHPVSGTCYCQPGVT-- 320 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~--~C~~~g~c-~~~~~C~~~~~~C~C~~g~~-- 320 (546)
++++|.+.||.++++|..+ .++|+|.|++||+|..|+..+.|... +|.+ +| ... .++|+|.|++||+
T Consensus 47 dideC~~~pC~n~g~C~~~--~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~----~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDD--INSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGA----DSKVLCSCTTGYRLA 118 (146)
T ss_dssp ---CCSSCSSCTTCEEEEC--SSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCS----SSCCCCBCCTTEEEC
T ss_pred CcCcCCCCCCCCCCEeECC--CCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCC----CCCEEeEcCCCcEeC
Confidence 6778999999999988764 56899999999999999987778753 4554 45 322 2789999999999
Q ss_pred --CCCCCc
Q psy14221 321 --GDRCDQ 326 (546)
Q Consensus 321 --G~~C~~ 326 (546)
|.+|+.
T Consensus 119 ~dG~~C~~ 126 (146)
T 1x7a_L 119 PDQKSCKP 126 (146)
T ss_dssp TTSSSEEE
T ss_pred CCCCcCCC
Confidence 778864
No 47
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.11 E-value=1.3e-06 Score=77.14 Aligned_cols=73 Identities=18% Similarity=0.515 Sum_probs=53.4
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCC--CCCCCCccc-CCccccCCceEec
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCAS--CECNAVGSV-NNSCDQITGQCVC 411 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~--~~C~~~g~c-~~~c~~~~~~C~C 411 (546)
++++|.+.+|.++|+|.+. ..+++|.|++||+|..|+. ++.|.. .+|.+ +| ... ..+|+|.|
T Consensus 47 dideC~~~pC~n~g~C~~~--~~~y~C~C~~G~~G~~C~~---------~deC~~~~~~C~~--~C~~n~--~g~y~C~C 111 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDD--INSYECWCQVGFEGKNCEL---------DATCNIKNGRCKQ--FCKTGA--DSKVLCSC 111 (146)
T ss_dssp ---CCSSCSSCTTCEEEEC--SSCEEEECCSSEESTTTCE---------ECCTTSGGGSCSS--BCCCCS--SSCCCCBC
T ss_pred CcCcCCCCCCCCCCEeECC--CCCEEEecCCCCcCCcCCC---------CccccCCCCCCcC--CCCCCC--CCCEEeEc
Confidence 5788999999999977654 5678999999999999985 345653 34544 45 443 45789999
Q ss_pred CCCCc----CCCCCC
Q psy14221 412 RKGVT----GRTCDK 422 (546)
Q Consensus 412 ~~G~~----G~~C~~ 422 (546)
++||+ |..|+.
T Consensus 112 ~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 112 TTGYRLAPDQKSCKP 126 (146)
T ss_dssp CTTEEECTTSSSEEE
T ss_pred CCCcEeCCCCCcCCC
Confidence 99999 777763
No 48
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.10 E-value=1.2e-06 Score=69.23 Aligned_cols=70 Identities=23% Similarity=0.424 Sum_probs=53.9
Q ss_pred CCCCCcc-CCCCCCCCccccccCCCceEEcCCCcc--CCCCCCCCCCC-CCCCCCCCCCCCCCCCcCCCcEEecCCCCcC
Q psy14221 246 RTGDCKP-CECNTSGSLGDECDSISGQCQCKENRA--GRTCNLALDCP-PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTG 321 (546)
Q Consensus 246 ~~~~C~~-~~C~~~g~c~~~c~~~~~~C~C~~g~~--G~~C~~~~~C~-~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G 321 (546)
++++|.. .+|.+ +.|..+ .++|+|.|++||+ |..|+..++|. ..+|.+ ++|... .++|+|.|++||+|
T Consensus 4 dideC~~~~~C~~-g~C~n~--~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~----~g~y~C~C~~G~~g 75 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINT--DGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNV----IGGFECTCEEGFEP 75 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCC--SSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEEC----SSSEEECCSSSSCC
T ss_pred ccccCCCCCCcCC-CEEEec--CCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeECC----CCCEEeECCCCeEe
Confidence 4567764 77864 677663 6789999999997 99998777787 778876 578433 37899999999998
Q ss_pred CC
Q psy14221 322 DR 323 (546)
Q Consensus 322 ~~ 323 (546)
..
T Consensus 76 ~~ 77 (82)
T 1emn_A 76 GP 77 (82)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 49
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.04 E-value=1.8e-06 Score=72.85 Aligned_cols=68 Identities=24% Similarity=0.432 Sum_probs=46.9
Q ss_pred CCCCccCC--------CCCCCCccccccCCCceEEcCCCccCCCCCCCCC---CCCC--CCCCCCCCCCCCCCcCCCcEE
Q psy14221 247 TGDCKPCE--------CNTSGSLGDECDSISGQCQCKENRAGRTCNLALD---CPPC--DCDPLGTLSVPQPCHPVSGTC 313 (546)
Q Consensus 247 ~~~C~~~~--------C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~---C~~~--~C~~~g~c~~~~~C~~~~~~C 313 (546)
+++|...| |.++++|..+ .++|+|.|++||+|..|+..++ |... .|.. +|.. ..+.|+|
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~--~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n----~~g~y~C 77 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDG--IGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLE----EVGWRRC 77 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCC--SSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEE----CSSSEEE
T ss_pred cccccCCCccccccccCCCcCCCCCC--CCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeEC----CCCCEEe
Confidence 34566666 8888888664 5689999999999999986543 5431 2222 4422 2378999
Q ss_pred ecCCCCcCC
Q psy14221 314 YCQPGVTGD 322 (546)
Q Consensus 314 ~C~~g~~G~ 322 (546)
.|++||+|.
T Consensus 78 ~C~~G~~~~ 86 (114)
T 1aut_L 78 SCAPGYKLG 86 (114)
T ss_dssp ECCTTEEEC
T ss_pred ECCCCeeEC
Confidence 999999954
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.96 E-value=1.1e-06 Score=81.03 Aligned_cols=77 Identities=25% Similarity=0.475 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCC-CCCCC--CCCCCCCCcceecCCCC
Q psy14221 282 TCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTV-NGCTS--CNCNRDGSLHFSCDVHT 358 (546)
Q Consensus 282 ~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~--~~C~~~g~c~~~C~~~~ 358 (546)
.|.....|.+.||.++|+|... .+.|.|.|++||+|.+|+. .+ ++|.. .+|.+ +|.+. ..+
T Consensus 38 ~c~dideC~~~pC~ngg~C~n~----~g~y~C~C~~Gf~G~~Ce~--------~i~deC~~~~~~C~~--~C~n~--~gs 101 (195)
T 1nfu_B 38 KYKDGDQCETSPCQNQGKCKDG----LGEYTCTCLEGFEGKNCEL--------FTRKLCSLDNGDCDQ--FCHEE--QNS 101 (195)
T ss_dssp -------------------------------------------------------CCGGGTGGGGCSS--EEEEE--TTE
T ss_pred cCCCCcccCCCCCCCCCEeECC----CCCeeEeCCCCceeccccc--------cccccccCCCCCCCC--EeECC--CCC
Confidence 3555567888999999999443 3789999999999999985 45 66765 35654 55543 567
Q ss_pred CeeeeCCCCC----CCCCCc
Q psy14221 359 GQCSCKPNMT----GLACDQ 374 (546)
Q Consensus 359 ~~C~C~~g~~----G~~C~~ 374 (546)
|+|.|++||+ |..|+.
T Consensus 102 y~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 102 VVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp EEEECCTTEEECTTSSCEEE
T ss_pred eEEECCCCceeCCCCCcccc
Confidence 8999999999 777763
No 51
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.94 E-value=2.8e-06 Score=67.96 Aligned_cols=70 Identities=23% Similarity=0.481 Sum_probs=52.8
Q ss_pred CCCCccCC--CCCCCCccccccCCCceEEcCCCcc----CCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCc
Q psy14221 247 TGDCKPCE--CNTSGSLGDECDSISGQCQCKENRA----GRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVT 320 (546)
Q Consensus 247 ~~~C~~~~--C~~~g~c~~~c~~~~~~C~C~~g~~----G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~ 320 (546)
+++|...+ | +++.|..+ .+.|+|.|++||+ |..|+...+|...+|. ++|.. .+++|+|.|+ |+.
T Consensus 3 ideC~~~~~~C-~~~~C~n~--~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n----~~g~y~C~C~-g~~ 72 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNI--PGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVN----YPGGYTCYCD-GKK 72 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCB--TTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECC----CSSSCCEECC-SSS
T ss_pred cccccCCCCCC-CCCEeECC--CCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEc----cCCCEEEECC-CCc
Confidence 46676655 7 66777663 5679999999998 8889876678877886 56733 2378999998 888
Q ss_pred CCCCCc
Q psy14221 321 GDRCDQ 326 (546)
Q Consensus 321 G~~C~~ 326 (546)
|..++.
T Consensus 73 G~~~~~ 78 (87)
T 1z6c_A 73 GFKLAQ 78 (87)
T ss_dssp CCBCCT
T ss_pred CCcccC
Confidence 877764
No 52
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.93 E-value=5.7e-06 Score=69.78 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=47.0
Q ss_pred CCCCCCC--------CCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCCC--CCCCCCCcceecCC
Q psy14221 287 LDCPPCD--------CDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTSC--NCNRDGSLHFSCDV 356 (546)
Q Consensus 287 ~~C~~~~--------C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~--~C~~~g~c~~~C~~ 356 (546)
++|...| |.++++|... .+.|+|.|++||+|..|+.- .++++|... .|.. +|.++ .
T Consensus 7 d~C~~~p~~~~C~~~C~~~g~C~~~----~~~y~C~C~~G~~G~~C~~~------~~~~~C~~~~~~C~~--~C~n~--~ 72 (114)
T 1aut_L 7 DQCLVLPLEHPCASLCCGHGTCIDG----IGSFSCDCRSGWEGRFCQRE------VSFLNCSLDNGGCTH--YCLEE--V 72 (114)
T ss_dssp -CCCCCSSCCSSSSTTTTSEEECCC----SSCCCEEECTTEESTTSCEE------CCSSSSSSGGGGCSS--EEEEC--S
T ss_pred ccccCCCccccccccCCCcCCCCCC----CCCcEeeCCCCCcCCCcCcC------CcCCcCcCCCCCCCC--EeECC--C
Confidence 3466666 8888888443 37899999999999999851 012356532 2332 44443 5
Q ss_pred CCCeeeeCCCCCCC
Q psy14221 357 HTGQCSCKPNMTGL 370 (546)
Q Consensus 357 ~~~~C~C~~g~~G~ 370 (546)
.+|+|.|++||+|.
T Consensus 73 g~y~C~C~~G~~~~ 86 (114)
T 1aut_L 73 GWRRCSCAPGYKLG 86 (114)
T ss_dssp SSEEEECCTTEEEC
T ss_pred CCEEeECCCCeeEC
Confidence 67899999999954
No 53
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.92 E-value=1.4e-06 Score=75.80 Aligned_cols=77 Identities=25% Similarity=0.475 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCC-CCCCC--CCCCCCCCcceecCCCC
Q psy14221 282 TCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTV-NGCTS--CNCNRDGSLHFSCDVHT 358 (546)
Q Consensus 282 ~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~--~~C~~~g~c~~~C~~~~ 358 (546)
.|.....|.+.||.++++|... .+.|+|.|++||+|.+|+. .+ ++|.. .+|.+ +|.+. ..+
T Consensus 38 ~c~d~d~C~~~pC~n~g~C~~~----~~~y~C~C~~G~~G~~C~~--------~i~d~C~~~~~~C~~--~C~~~--~g~ 101 (134)
T 2vh0_B 38 KYKDGDQCETSPCQNQGKCKDG----LGEYTCTCLEGFEGKNCEL--------FTRKLCSLDNGDCDQ--FCHEE--QNS 101 (134)
T ss_dssp -------------------------------------------------------CCGGGTGGGGCSS--EEEEE--TTE
T ss_pred cCCCcCcCCCCCCCCcCCcccC----CCCEEeeCCCCccCCcccc--------CCCCccccCCCCCCC--EeECC--CCC
Confidence 4555567888899999988443 3789999999999999985 45 56764 34654 55543 467
Q ss_pred CeeeeCCCCC----CCCCCc
Q psy14221 359 GQCSCKPNMT----GLACDQ 374 (546)
Q Consensus 359 ~~C~C~~g~~----G~~C~~ 374 (546)
++|.|++||+ |..|+.
T Consensus 102 y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 102 VVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp EEEECCTTEEECTTSSCEEE
T ss_pred EEEECCCCcEECCCCCccCc
Confidence 8999999999 887763
No 54
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.88 E-value=2e-06 Score=90.73 Aligned_cols=78 Identities=28% Similarity=0.742 Sum_probs=36.4
Q ss_pred EEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCC
Q psy14221 312 TCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQELGCASCE 391 (546)
Q Consensus 312 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~ 391 (546)
...|..+|.|..|+. +.|.. +|.+ | +|. ..++|.|++||+|..|+. ..|.+ +
T Consensus 378 p~~C~~~~~g~~c~~----------~~C~~-~C~n-G----~C~-~~~~C~C~~G~~G~~C~~----------~~C~~-~ 429 (463)
T 2wg3_C 378 PEECRATVQPAQTLT----------SECSR-LCRN-G----YCT-PTGKCCCSPGWEGDFCRT----------AKCEP-A 429 (463)
T ss_dssp CGGGCCCCCCCCCCC----------CHHHH-HCCS-E----EEC-TTSCEEECTTEESTTSCE----------ECC----
T ss_pred cccCCCCCcCCCCcc----------ccccC-CCCC-C----ccC-CCCeECCCCCcCCCcCCc----------CcCCC-C
Confidence 357888899988864 45654 5876 6 665 347999999999999973 34766 8
Q ss_pred CCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 392 CNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 392 C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
|.++|+|.. .++|.|++||+|..|+.
T Consensus 430 C~~~g~C~~-----~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 430 CRHGGVCVR-----PNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp -------------------------------
T ss_pred CCCCCEECC-----CCEEECCCCcccCCCCC
Confidence 999888854 37999999999999984
No 55
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.88 E-value=6.2e-06 Score=59.37 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCCCcceec---CCCCCeeeeCCCCCCCCCCc
Q psy14221 335 TVNGCTSCNCNRDGSLHFSC---DVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C---~~~~~~C~C~~g~~G~~C~~ 374 (546)
++++|.+.||.|+|+|...= ....|+|.|++||+|.+||+
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred cCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 78999999999999764210 14578999999999999985
No 56
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.87 E-value=6.3e-06 Score=59.32 Aligned_cols=41 Identities=15% Similarity=0.290 Sum_probs=33.4
Q ss_pred CCCCCccCCCCCCCCcccc---ccCCCceEEcCCCccCCCCCCC
Q psy14221 246 RTGDCKPCECNTSGSLGDE---CDSISGQCQCKENRAGRTCNLA 286 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~---c~~~~~~C~C~~g~~G~~C~~~ 286 (546)
.+++|.+.||.|+|+|... -....|+|.|++||+|.+||..
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred cCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 6789999999999999532 1356799999999999999854
No 57
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.86 E-value=1.8e-06 Score=79.66 Aligned_cols=74 Identities=22% Similarity=0.553 Sum_probs=23.1
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCC-CCCCC--CCCCCCcccCCccccCCceEec
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQE-LGCAS--CECNAVGSVNNSCDQITGQCVC 411 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~--~~C~~~g~c~~~c~~~~~~C~C 411 (546)
++++|.+.||.++|+|... ..+|+|.|++||+|..|+. .+ +.|.. .+|.+ +|... ..+|+|.|
T Consensus 41 dideC~~~pC~ngg~C~n~--~g~y~C~C~~Gf~G~~Ce~--------~i~deC~~~~~~C~~--~C~n~--~gsy~C~C 106 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDG--LGEYTCTCLEGFEGKNCEL--------FTRKLCSLDNGDCDQ--FCHEE--QNSVVCSC 106 (195)
T ss_dssp --------------------------------------------------CCGGGTGGGGCSS--EEEEE--TTEEEEEC
T ss_pred CCcccCCCCCCCCCEeECC--CCCeeEeCCCCceeccccc--------cccccccCCCCCCCC--EeECC--CCCeEEEC
Confidence 5688999999999977653 4678999999999999974 22 45663 34654 55443 45789999
Q ss_pred CCCCc----CCCCCC
Q psy14221 412 RKGVT----GRTCDK 422 (546)
Q Consensus 412 ~~G~~----G~~C~~ 422 (546)
++||+ |..|+.
T Consensus 107 ~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 107 ARGYTLADNGKACIP 121 (195)
T ss_dssp CTTEEECTTSSCEEE
T ss_pred CCCceeCCCCCcccc
Confidence 99999 888763
No 58
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.84 E-value=2.6e-06 Score=89.87 Aligned_cols=78 Identities=27% Similarity=0.661 Sum_probs=34.9
Q ss_pred eeeeCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCceEecCCCCcCCCCCCCCCCCCCCCCCCcccCC
Q psy14221 360 QCSCKPNMTGLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDKCRPDYFGFSVNGCTECA 439 (546)
Q Consensus 360 ~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~ 439 (546)
...|.++|.|..|+ .+.|.. +|.+ |+|.. .++|.|++||+|..|+. ..|.+
T Consensus 378 p~~C~~~~~g~~c~----------~~~C~~-~C~n-G~C~~-----~~~C~C~~G~~G~~C~~----------~~C~~-- 428 (463)
T 2wg3_C 378 PEECRATVQPAQTL----------TSECSR-LCRN-GYCTP-----TGKCCCSPGWEGDFCRT----------AKCEP-- 428 (463)
T ss_dssp CGGGCCCCCCCCCC----------CCHHHH-HCCS-EEECT-----TSCEEECTTEESTTSCE----------ECC----
T ss_pred cccCCCCCcCCCCc----------cccccC-CCCC-CccCC-----CCeECCCCCcCCCcCCc----------CcCCC--
Confidence 35777888888776 334654 5876 66643 46899999999999973 13443
Q ss_pred cccCCCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
+| +++|+|. ..++|.|++||+|.+|+.
T Consensus 429 ~C-~~~g~C~-~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 429 AC-RHGGVCV-RPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp -----------------------------
T ss_pred CC-CCCCEEC-CCCEEECCCCcccCCCCC
Confidence 58 8899998 348999999999999985
No 59
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.83 E-value=7.1e-06 Score=65.55 Aligned_cols=70 Identities=19% Similarity=0.353 Sum_probs=51.8
Q ss_pred CCCCCCCCC--CCCCCCcceecCCCCCeeeeCCCCC----CCCCCcCCCCCcCCCCCCCCCCCCCCCcccCCccccCCce
Q psy14221 335 TVNGCTSCN--CNRDGSLHFSCDVHTGQCSCKPNMT----GLACDQCTEGHWGLQELGCASCECNAVGSVNNSCDQITGQ 408 (546)
Q Consensus 335 ~~~~C~~~~--C~~~g~c~~~C~~~~~~C~C~~g~~----G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~c~~~~~~ 408 (546)
++++|...+ | ++++|.++ ..+|+|.|++||+ |..|+ +++.|...+|. ++|..+ ..+|+
T Consensus 2 dideC~~~~~~C-~~~~C~n~--~g~y~C~C~~G~~~~~~g~~C~---------dideC~~~~C~--~~C~n~--~g~y~ 65 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNI--PGDFECECPEGYRYNLKSKSCE---------DIDECSENMCA--QLCVNY--PGGYT 65 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCB--TTBCCCSSSTTCEEETTTTEEE---------CCCHHHHSCCS--SEECCC--SSSCC
T ss_pred ccccccCCCCCC-CCCEeECC--CCCEEEECCCCceECCCCCcCC---------CcCeeCCCCCC--CEEEcc--CCCEE
Confidence 467787666 8 66766653 5678999999999 67665 36677777776 566655 56899
Q ss_pred EecCCCCcCCCCC
Q psy14221 409 CVCRKGVTGRTCD 421 (546)
Q Consensus 409 C~C~~G~~G~~C~ 421 (546)
|.|+ ||.|..++
T Consensus 66 C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 66 CYCD-GKKGFKLA 77 (87)
T ss_dssp EECC-SSSCCBCC
T ss_pred EECC-CCcCCccc
Confidence 9998 88887765
No 60
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.82 E-value=2.4e-06 Score=74.38 Aligned_cols=74 Identities=22% Similarity=0.553 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCCcCCCCCcCCCC-CCCCC--CCCCCCcccCCccccCCceEec
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQCTEGHWGLQE-LGCAS--CECNAVGSVNNSCDQITGQCVC 411 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~-~~C~~--~~C~~~g~c~~~c~~~~~~C~C 411 (546)
++++|.+.+|.++|+|... ..+|+|.|++||+|..|+. .+ +.|.. .+|.+ +|... ..+|+|.|
T Consensus 41 d~d~C~~~pC~n~g~C~~~--~~~y~C~C~~G~~G~~C~~--------~i~d~C~~~~~~C~~--~C~~~--~g~y~C~C 106 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDG--LGEYTCTCLEGFEGKNCEL--------FTRKLCSLDNGDCDQ--FCHEE--QNSVVCSC 106 (134)
T ss_dssp --------------------------------------------------CCGGGTGGGGCSS--EEEEE--TTEEEEEC
T ss_pred CcCcCCCCCCCCcCCcccC--CCCEEeeCCCCccCCcccc--------CCCCccccCCCCCCC--EeECC--CCCEEEEC
Confidence 5688988999999977653 4678999999999999874 12 44653 34554 45443 45789999
Q ss_pred CCCCc----CCCCCC
Q psy14221 412 RKGVT----GRTCDK 422 (546)
Q Consensus 412 ~~G~~----G~~C~~ 422 (546)
++||+ |..|+.
T Consensus 107 ~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 107 ARGYTLADNGKACIP 121 (134)
T ss_dssp CTTEEECTTSSCEEE
T ss_pred CCCcEECCCCCccCc
Confidence 99999 888863
No 61
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.75 E-value=6.2e-06 Score=65.73 Aligned_cols=69 Identities=20% Similarity=0.425 Sum_probs=49.9
Q ss_pred CCCCCCCCC--CCCCCCcceecCCCCCeeeeCCCCC-----CCCCCcCCCCCcCCCCCCCCCCC--CCCCcccCCccccC
Q psy14221 335 TVNGCTSCN--CNRDGSLHFSCDVHTGQCSCKPNMT-----GLACDQCTEGHWGLQELGCASCE--CNAVGSVNNSCDQI 405 (546)
Q Consensus 335 ~~~~C~~~~--C~~~g~c~~~C~~~~~~C~C~~g~~-----G~~C~~C~~g~~g~~~~~C~~~~--C~~~g~c~~~c~~~ 405 (546)
++++|...+ |.+ ++|.++ ..+|+|.|++||+ |..|+ +++.|...+ |. +++|..+ ..
T Consensus 2 dideC~~~~~~C~~-g~C~n~--~g~y~C~C~~Gy~~~~~~g~~C~---------dideC~~~~~~C~-~~~C~n~--~g 66 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNT--PGDFECKCDEGYESGFMMMKNCM---------DIDECQRDPLLCR-GGVCHNT--EG 66 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEE--TTEEEECCCSSEEECTTTSSSEE---------ECCHHHHCSSTTT-TSEEEEE--TT
T ss_pred ccccccCCCCCCCC-CEEECC--CCCEEeeCCCCcCccCCCCCccC---------CcccccCCCCcCC-CCEeEcC--CC
Confidence 467787555 865 577764 5679999999998 56664 266776444 65 4677655 56
Q ss_pred CceEecCCCCcCC
Q psy14221 406 TGQCVCRKGVTGR 418 (546)
Q Consensus 406 ~~~C~C~~G~~G~ 418 (546)
+|+|.|++||++.
T Consensus 67 ~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 67 SYRCECPPGHQLS 79 (86)
T ss_dssp EEEEESCTTSCCC
T ss_pred CEEEECcCCcccC
Confidence 7899999999985
No 62
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.75 E-value=2.6e-05 Score=78.11 Aligned_cols=68 Identities=24% Similarity=0.422 Sum_probs=54.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCCC---CCCCCCCCcceecCCCCCeeee
Q psy14221 287 LDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCTS---CNCNRDGSLHFSCDVHTGQCSC 363 (546)
Q Consensus 287 ~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~---~~C~~~g~c~~~C~~~~~~C~C 363 (546)
.+|.+.||.++++|.... ..++|.|++||+|.+|+. ++++|.. .+|.+ +|.+. ...++|.|
T Consensus 6 ~~C~~~pC~~~g~C~~~~----~~~~C~C~~g~~g~~C~~--------~~~eC~~~~~~~C~~--~C~~~--~g~~~C~C 69 (317)
T 3h5c_B 6 SPCISQPCLHNGSCQDSI----WGYTCTCSPGYEGSNCEL--------AKNECHPERTDGCQH--FCLPG--QESYTCSC 69 (317)
T ss_dssp CCTTSCCCTTTCCCCCCS----SSCCCCCSSSCCSSSSCC--------CSSSCCTTCTTSCSS--EEECC--SSSCEEEC
T ss_pred CcCCCCCCCCCCEeECCC----CCeEEECCCCCcCCcccc--------CcccCCCCCCCCCcC--ccccC--CCeeEEec
Confidence 458888999999884432 679999999999999986 6788876 67876 55543 56789999
Q ss_pred CCCCCCC
Q psy14221 364 KPNMTGL 370 (546)
Q Consensus 364 ~~g~~G~ 370 (546)
++||+|.
T Consensus 70 ~~g~~~~ 76 (317)
T 3h5c_B 70 AQGYRLG 76 (317)
T ss_dssp CTTEECC
T ss_pred ccccccc
Confidence 9999885
No 63
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.72 E-value=0.0017 Score=72.16 Aligned_cols=123 Identities=20% Similarity=0.382 Sum_probs=70.1
Q ss_pred CCceEE----cCCCccCCCCCCCCCCC---CCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCcCCCCCCccCCCCCC
Q psy14221 268 ISGQCQ----CKENRAGRTCNLALDCP---PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQCDTGYWNFTVNGCT 340 (546)
Q Consensus 268 ~~~~C~----C~~g~~G~~C~~~~~C~---~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~C~~g~~g~~~~~C~ 340 (546)
...+|. |..|..+..|.....|. ..+|.+ |.|..... .-.+.+.|+.++.+...+ | ++++|.
T Consensus 230 ~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~~~~C~~-g~Ci~~~~--~Cd~~~dC~dgsDe~~~~-C-------~~~eC~ 298 (699)
T 1n7d_A 230 GSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHS-GECITLDK--VCNMARDCRDWSDEPIKE-C-------GTNECL 298 (699)
T ss_dssp TTCCSSSCCCSSSSCSSSSTTCCCCCCSTTCCCCTT-SCCCCSSC--CSCSSCCSSSSCSCCCSS-C-------CCCCTT
T ss_pred eecccCCCCCCCCCCccCCCCCCCcccCCCceecCC-CcEeCCcc--cccccceecCcccccccc-c-------cccccc
Confidence 455664 88888888887655563 245654 44422110 012445666666554221 1 234444
Q ss_pred CCCCCCCCCcceecC--CCCCeeeeCCCCC---CCCCCcCCCCCcCCCCCCCC-CCCCCCCcccCCccccCCceEecCCC
Q psy14221 341 SCNCNRDGSLHFSCD--VHTGQCSCKPNMT---GLACDQCTEGHWGLQELGCA-SCECNAVGSVNNSCDQITGQCVCRKG 414 (546)
Q Consensus 341 ~~~C~~~g~c~~~C~--~~~~~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~c~~~~~~C~C~~G 414 (546)
..+ +.|...|. ...|+|.|++||. |..|+. ++.|. ..+|.. .|..+ ..+|+|.|++|
T Consensus 299 ~~~----~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~d---------ideC~~~~~C~~--~C~n~--~g~y~C~C~~G 361 (699)
T 1n7d_A 299 DNN----GGCSHVCNDLKIGYECLCPDGFQLVAQRRCED---------IDECQDPDTCSQ--LCVNL--EGGYKCQCEEG 361 (699)
T ss_dssp SST----TTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCC---------CCCCSSSSSCTT--TCCBC--SSCBCCCCCSS
T ss_pred ccc----cCcCCCcccCCCCcEEeCCCCeEcCCCCcccC---------ccccCCCCcccc--ccccC--CCCeeeeeecc
Confidence 221 22222343 4578999999998 666652 56665 345642 45444 56899999999
Q ss_pred CcCC
Q psy14221 415 VTGR 418 (546)
Q Consensus 415 ~~G~ 418 (546)
|++.
T Consensus 362 ~~~~ 365 (699)
T 1n7d_A 362 FQLD 365 (699)
T ss_dssp CBCC
T ss_pred cccC
Confidence 9863
No 64
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.71 E-value=5e-06 Score=66.31 Aligned_cols=69 Identities=22% Similarity=0.437 Sum_probs=49.9
Q ss_pred CCCCCccCC--CCCCCCccccccCCCceEEcCCCcc-----CCCCCCCCCCCCCC--CCCCCCCCCCCCCcCCCcEEecC
Q psy14221 246 RTGDCKPCE--CNTSGSLGDECDSISGQCQCKENRA-----GRTCNLALDCPPCD--CDPLGTLSVPQPCHPVSGTCYCQ 316 (546)
Q Consensus 246 ~~~~C~~~~--C~~~g~c~~~c~~~~~~C~C~~g~~-----G~~C~~~~~C~~~~--C~~~g~c~~~~~C~~~~~~C~C~ 316 (546)
++++|...+ |.+ +.|..+ .++|+|.|++||+ |..|+...+|...+ |. +++|.. ..++|+|.|+
T Consensus 2 dideC~~~~~~C~~-g~C~n~--~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n----~~g~y~C~C~ 73 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNT--PGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHN----TEGSYRCECP 73 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEE--TTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEE----ETTEEEEESC
T ss_pred ccccccCCCCCCCC-CEEECC--CCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEc----CCCCEEEECc
Confidence 356676544 854 477653 6689999999998 78898766787554 65 467732 3478999999
Q ss_pred CCCcCC
Q psy14221 317 PGVTGD 322 (546)
Q Consensus 317 ~g~~G~ 322 (546)
+||++.
T Consensus 74 ~G~~~~ 79 (86)
T 1lmj_A 74 PGHQLS 79 (86)
T ss_dssp TTSCCC
T ss_pred CCcccC
Confidence 999975
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=0.003 Score=70.14 Aligned_cols=162 Identities=18% Similarity=0.445 Sum_probs=89.3
Q ss_pred CccccCCcccC---CCCCCCCCCCCCCCCCCCCCC--CCCCCCCceeCCCCCCCcCCCCCccc---CCCCCcCCCCCCcC
Q psy14221 166 PRHILTSRGCA---SCEDGYIGDHCESCDAGYYGN--PTELGGSCVPCSCGGGPCDASTGECV---QCRGNTEGARCERC 237 (546)
Q Consensus 166 ~~C~~~~~~C~---~C~~g~~G~~C~~~~~~c~~~--~c~~~g~C~~C~C~~~~C~~~~g~C~---~C~~g~~G~~Ce~C 237 (546)
+.|+...++|+ .|..|.-...|.. ..|... .|. .+.|++ ...+|. .|..+.....|..
T Consensus 186 g~Ci~~~~~CDg~~dC~dgsDE~~C~~--~~C~~~~f~C~-~g~Ci~----------~~~~Cdg~~dC~dgsde~~C~~- 251 (699)
T 1n7d_A 186 GECIHSSWRCDGGPDCKDKSDEENCAV--ATCRPDEFQCS-DGNCIH----------GSRQCDREYDCKDMSDEVGCVN- 251 (699)
T ss_dssp SCCCSTTCTTSSSCCSTTSCSSCSCCC--CCCCSSEEESS-SSCEEE----------TTCCSSSCCCSSSSCSSSSTTC-
T ss_pred CceEechhccCCCCCCCCCcccccCCC--cccCCCcEecC-CCceee----------eecccCCCCCCCCCCccCCCCC-
Confidence 44555555663 5777776666652 222221 344 245554 233332 3777777777742
Q ss_pred CCCcccCCCCCCCc---cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCC-CCCCCCCCCc--CCCc
Q psy14221 238 KPLYYGDPRTGDCK---PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPL-GTLSVPQPCH--PVSG 311 (546)
Q Consensus 238 ~~G~~g~~~~~~C~---~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~-g~c~~~~~C~--~~~~ 311 (546)
...|. ...|.+ |.|...-..-.+.+.|+.|+.+... .|...+|..+ +.| ...|. ++.|
T Consensus 252 ---------~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~----~C~~~eC~~~~~~C--~~~C~~~~~~~ 315 (699)
T 1n7d_A 252 ---------VTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIK----ECGTNECLDNNGGC--SHVCNDLKIGY 315 (699)
T ss_dssp ---------CCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCS----SCCCCCTTSSTTTS--CTTCCCCTTCC
T ss_pred ---------CCcccCCCceecCC-CcEeCCcccccccceecCccccccc----ccccccccccccCc--CCCcccCCCCc
Confidence 11231 234443 4443321222456778887765421 2444455432 333 12333 3789
Q ss_pred EEecCCCCc---CCCCCcCCCCCCccCCCCCC-CCCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 312 TCYCQPGVT---GDRCDQCDTGYWNFTVNGCT-SCNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 312 ~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
+|.|++||+ |..|+ ++++|. +.+|. ..|.++ ..+|+|.|++||++.
T Consensus 316 ~C~C~~G~~~~~~~~C~---------dideC~~~~~C~--~~C~n~--~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 316 ECLCPDGFQLVAQRRCE---------DIDECQDPDTCS--QLCVNL--EGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCSSSCCCSSSCCC---------CCCCCSSSSSCT--TTCCBC--SSCBCCCCCSSCBCC
T ss_pred EEeCCCCeEcCCCCccc---------CccccCCCCccc--cccccC--CCCeeeeeecccccC
Confidence 999999999 66776 567886 45565 344443 578999999999863
No 66
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.65 E-value=3.9e-05 Score=76.79 Aligned_cols=69 Identities=25% Similarity=0.454 Sum_probs=54.6
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCC-CCCCCCC---CCCCCCCCCCCCCCCcCCCcEEecCCCCcC
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCN-LALDCPP---CDCDPLGTLSVPQPCHPVSGTCYCQPGVTG 321 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~-~~~~C~~---~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G 321 (546)
++++|.+.||.++++|... ...++|.|++||+|..|+ ...+|.. .+|.+ +|.. ..+.++|.|++||+|
T Consensus 4 d~~~C~~~pC~~~g~C~~~--~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~----~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDS--IWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLP----GQESYTCSCAQGYRL 75 (317)
T ss_dssp --CCTTSCCCTTTCCCCCC--SSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEEC----CSSSCEEECCTTEEC
T ss_pred cCCcCCCCCCCCCCEeECC--CCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--cccc----CCCeeEEeccccccc
Confidence 3567889999999999764 567999999999999999 5556876 67876 6633 237899999999997
Q ss_pred C
Q psy14221 322 D 322 (546)
Q Consensus 322 ~ 322 (546)
.
T Consensus 76 ~ 76 (317)
T 3h5c_B 76 G 76 (317)
T ss_dssp C
T ss_pred c
Confidence 4
No 67
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.56 E-value=5.1e-05 Score=50.51 Aligned_cols=37 Identities=24% Similarity=0.547 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCCCCC
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGLACD 373 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~ 373 (546)
++++|.+.||.++|+|... ...++|.|++||+|.+|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~--~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDD--INSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEE--TTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcC--CCceEeECCCCCcCCccC
Confidence 4678888999999977654 467899999999999987
No 68
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.41 E-value=7.6e-05 Score=49.62 Aligned_cols=37 Identities=27% Similarity=0.576 Sum_probs=31.5
Q ss_pred CCCCCccCCCCCCCCccccccCCCceEEcCCCccCCCCC
Q psy14221 246 RTGDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCN 284 (546)
Q Consensus 246 ~~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~ 284 (546)
++++|.+.||.++++|... .+.++|.|++||+|.+|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~--~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDD--INSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEE--TTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcC--CCceEeECCCCCcCCccC
Confidence 3567888999999988764 567899999999999986
No 69
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.29 E-value=5.5e-05 Score=62.84 Aligned_cols=51 Identities=24% Similarity=0.453 Sum_probs=16.6
Q ss_pred CCCceEEcCCCccC---CCCCCCCCCC-CCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCC
Q psy14221 267 SISGQCQCKENRAG---RTCNLALDCP-PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDR 323 (546)
Q Consensus 267 ~~~~~C~C~~g~~G---~~C~~~~~C~-~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~ 323 (546)
.+.|+|.|++||+| ..|+..++|. +.+|. ++|.. ..++|.|.|++||++..
T Consensus 47 ~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n----~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 47 KIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVN----LEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp SBSCEEECCTTCEEETTTEEEC---------------------------------------
T ss_pred CCCeEEECCCCccccCCCccccccccCCCCCcC--Ceeec----CCCCEEEECCCCceECC
Confidence 46799999999998 7898767787 36775 56633 23789999999998753
No 70
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.23 E-value=6.4e-05 Score=62.44 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=28.0
Q ss_pred cCCCCcCCCCCcCCCCCCccCCCCCCCC--CCCCCCCcceecCCCCCeeeeCCCCCC---CCCCcCCCCCcCCCCCCCC-
Q psy14221 315 CQPGVTGDRCDQCDTGYWNFTVNGCTSC--NCNRDGSLHFSCDVHTGQCSCKPNMTG---LACDQCTEGHWGLQELGCA- 388 (546)
Q Consensus 315 C~~g~~G~~C~~C~~g~~g~~~~~C~~~--~C~~~g~c~~~C~~~~~~C~C~~g~~G---~~C~~C~~g~~g~~~~~C~- 388 (546)
...+|+|..|+. ++|... .|. .+|.+. ...|+|.|++||+| ..|+ +++.|.
T Consensus 18 ~~~~~~~~~Cd~----------neC~~~~~~C~--~~C~n~--~g~y~C~C~~Gy~g~~g~~C~---------dideC~~ 74 (107)
T 2w2n_E 18 TENLYFQGAMGT----------NECLDNNGGCS--YVCNDL--KIGYECLCPDGFQLVAQRRCE---------DIDECQD 74 (107)
T ss_dssp --CCCCSCCBSC----------CGGGTGGGGCS--SEEECC--SBSCEEECCTTCEEETTTEEE---------C------
T ss_pred cCCCcCCCCCcC----------ccCcCCCCCCC--CEeEeC--CCCeEEECCCCccccCCCccc---------cccccCC
Confidence 346788888853 556532 332 233322 45789999999998 5665 366676
Q ss_pred CCCCCCCcccCCccccCCceEecCCCCcCC
Q psy14221 389 SCECNAVGSVNNSCDQITGQCVCRKGVTGR 418 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~ 418 (546)
..+|. ++|..+ ..+|+|.|++||++.
T Consensus 75 ~~~C~--~~C~n~--~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 75 PDTCS--QLCVNL--EGGYKCQCEEGFQLD 100 (107)
T ss_dssp ------------------------------
T ss_pred CCCcC--CeeecC--CCCEEEECCCCceEC
Confidence 35665 466555 568999999999974
No 71
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.03 E-value=0.0002 Score=49.41 Aligned_cols=38 Identities=21% Similarity=0.406 Sum_probs=29.0
Q ss_pred CCCcc---CCCCCCCCccccccCCCceEEcCCCccCCCCCCC
Q psy14221 248 GDCKP---CECNTSGSLGDECDSISGQCQCKENRAGRTCNLA 286 (546)
Q Consensus 248 ~~C~~---~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~ 286 (546)
++|.+ .||.+ |+|...-..+.++|.|++||+|.+||..
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 45655 79988 7886532335789999999999999863
No 72
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.01 E-value=0.00035 Score=49.87 Aligned_cols=40 Identities=20% Similarity=0.320 Sum_probs=31.5
Q ss_pred CCCCccC---CCCCCCCccccccCCCceEEcCCCccCCCCCCC
Q psy14221 247 TGDCKPC---ECNTSGSLGDECDSISGQCQCKENRAGRTCNLA 286 (546)
Q Consensus 247 ~~~C~~~---~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~ 286 (546)
+++|.+. ||.++|+|..+-..+.++|.|++||+|.+|+..
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 4567665 999999987322467899999999999999864
No 73
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.01 E-value=0.00028 Score=48.75 Aligned_cols=38 Identities=26% Similarity=0.723 Sum_probs=28.5
Q ss_pred CCCCCC---CCCCCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 336 VNGCTS---CNCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 336 ~~~C~~---~~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
+++|.+ .||.+ |+|...-....+.|.|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 456766 89999 866543122468999999999999984
No 74
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.99 E-value=0.00052 Score=77.10 Aligned_cols=116 Identities=16% Similarity=0.439 Sum_probs=59.4
Q ss_pred CCCCCcCCCCCCcCCCCcccCCCCCCCc---cCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCCCCCCCC-CC
Q psy14221 224 QCRGNTEGARCERCKPLYYGDPRTGDCK---PCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPPCDCDPL-GT 299 (546)
Q Consensus 224 ~C~~g~~G~~Ce~C~~G~~g~~~~~~C~---~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~~~C~~~-g~ 299 (546)
.|.++..+..|.. ...|. ..+|.+ |.|...-..-.+.+.|+.|+.+.. ..|...+|..+ +.
T Consensus 257 dC~dgsDE~~C~~----------~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~----~~C~~~~C~~~~~~ 321 (791)
T 3m0c_C 257 DCKDMSDEVGCVN----------VTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPI----KECGTNECLDNNGG 321 (791)
T ss_dssp --------------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCC----TTBSCCSTTTGGGG
T ss_pred ccccccccCcccc----------cccccCCCccccCC-CcccccccccCCccccccccCccc----cccccccccccccC
Confidence 3777777777741 11221 234554 445432122235667888876542 23555566543 22
Q ss_pred CCCCCCCc--CCCcEEecCCCCc---CCCCCcCCCCCCccCCCCCC-CCCCCCCCCcceecCCCCCeeeeCCCCCC
Q psy14221 300 LSVPQPCH--PVSGTCYCQPGVT---GDRCDQCDTGYWNFTVNGCT-SCNCNRDGSLHFSCDVHTGQCSCKPNMTG 369 (546)
Q Consensus 300 c~~~~~C~--~~~~~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~C~~~~~~C~C~~g~~G 369 (546)
| ...|. ++.|.|.|++||. |..|+ ++++|. +.+|. ..|.++ ..+|+|.|++||.+
T Consensus 322 C--~~~C~~~~~~y~C~C~~Gy~l~~g~~C~---------dideC~~~~~C~--~~C~n~--~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 322 C--SHVCNDLKIGYECLCPDGFQLVAQRRCE---------DIDECQDPDTCS--QLCVNL--EGGYKCQCEEGFQL 382 (791)
T ss_dssp C--SSEEEECSBSEEEECCTTCEEETTTEEE---------CCCCCSSSSSCT--TTCCBC--SSCBCCCCCSSEEC
T ss_pred c--cccccCCCCCcccCCCCCCccCCCCccc---------cCcccCCCCCCC--CeeecC--CCCceeecCCCCEe
Confidence 3 12332 3689999999995 77776 578886 34454 345443 57899999999975
No 75
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.98 E-value=0.00042 Score=47.61 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=28.7
Q ss_pred CCccC---CCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 249 DCKPC---ECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 249 ~C~~~---~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
+|.+. ||.++|+|...-....++|.|++||+|.+|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 35555 89999988632235679999999999999984
No 76
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.88 E-value=4.9e-05 Score=54.16 Aligned_cols=46 Identities=20% Similarity=0.325 Sum_probs=32.5
Q ss_pred ceEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 270 GQCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 270 ~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
.+|.|++||+ +.||.|+|+|.....-....++|.|++||+|.+|+.
T Consensus 3 ~~C~C~~g~~-----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD-----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHH-----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCc-----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 4688888886 357888888842100011467999999999999985
No 77
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.86 E-value=0.001 Score=47.34 Aligned_cols=40 Identities=23% Similarity=0.512 Sum_probs=30.6
Q ss_pred CCCCCCCC---CCCCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 335 TVNGCTSC---NCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 335 ~~~~C~~~---~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
++++|.+. ||.++|+|..+=....++|.|++||+|.+|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 35677776 99999977621124678999999999999985
No 78
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.80 E-value=0.00066 Score=46.59 Aligned_cols=37 Identities=22% Similarity=0.462 Sum_probs=27.1
Q ss_pred CCCCC---CCCCCCCcceecCCCCCeeeeCCCCCCCCCCc
Q psy14221 338 GCTSC---NCNRDGSLHFSCDVHTGQCSCKPNMTGLACDQ 374 (546)
Q Consensus 338 ~C~~~---~C~~~g~c~~~C~~~~~~C~C~~g~~G~~C~~ 374 (546)
+|.+. ||.++|+|...=....++|.|++||+|.+|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 35555 89999966521124578999999999999984
No 79
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.59 E-value=0.00021 Score=52.53 Aligned_cols=42 Identities=14% Similarity=0.430 Sum_probs=34.0
Q ss_pred CCCCCccCCCCCC--CCccccccCCCceEEcCCCcc-CCCCCCCCCC
Q psy14221 246 RTGDCKPCECNTS--GSLGDECDSISGQCQCKENRA-GRTCNLALDC 289 (546)
Q Consensus 246 ~~~~C~~~~C~~~--g~c~~~c~~~~~~C~C~~g~~-G~~C~~~~~C 289 (546)
.+++|.+.||.++ |+|..+ .+.|+|.|++||+ |.+|+....|
T Consensus 10 ~~d~C~snPC~nga~gtC~~~--~g~y~C~C~~Gy~~G~~C~~~~~C 54 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKET--NSGYICRCNQGYRISLDGTGNVTC 54 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEEC--SSEEEEECCTTEEEEECSSSCEEE
T ss_pred CCCcCcCCCCcCCCccccccC--CCceEeECCCCCccCCCCCCCCEe
Confidence 4577888999998 788764 5679999999999 9999865444
No 80
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.55 E-value=0.0022 Score=71.95 Aligned_cols=67 Identities=24% Similarity=0.554 Sum_probs=44.7
Q ss_pred CCccCCCCCC-CCcccccc--CCCceEEcCCCcc---CCCCCCCCCCC-CCCCCCCCCCCCCCCCcCCCcEEecCCCCcC
Q psy14221 249 DCKPCECNTS-GSLGDECD--SISGQCQCKENRA---GRTCNLALDCP-PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTG 321 (546)
Q Consensus 249 ~C~~~~C~~~-g~c~~~c~--~~~~~C~C~~g~~---G~~C~~~~~C~-~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G 321 (546)
+|...+|..+ +.|...|. .+.|+|.|++||. |..|+...+|. +.+|. .+|.. ..++|+|.|++||.+
T Consensus 309 ~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n----~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 309 ECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVN----LEGGYKCQCEEGFQL 382 (791)
T ss_dssp TBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCB----CSSCBCCCCCSSEEC
T ss_pred ccccccccccccCccccccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--Ceeec----CCCCceeecCCCCEe
Confidence 3555556532 33444443 4679999999995 88898777786 34443 34522 338899999999975
No 81
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.50 E-value=0.00019 Score=51.05 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=23.4
Q ss_pred cccCCCCcccC------CCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCSE------ESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~~------~~~~C~C~~g~~G~~C~~ 468 (546)
+| +|+|+|.. ..++|+|++||+|.+|+.
T Consensus 15 pC-~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 15 YC-LNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp TS-CTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred cC-CCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 48 89999972 256999999999999974
No 82
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.41 E-value=0.00045 Score=51.24 Aligned_cols=38 Identities=32% Similarity=0.550 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCCCCCC-CCcCCCcEEecCCCCcCCCCCc
Q psy14221 289 CPPCDCDPLGTLSVPQ-PCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 289 C~~~~C~~~g~c~~~~-~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
|.+.||.|+|+|.... .-....++|.|++||+|.+|+.
T Consensus 9 C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 9 KEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp HHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 5567888888884310 0012679999999999999986
No 83
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.22 E-value=0.00052 Score=50.38 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCC--CCcceecCCCCCeeeeCCCCC-CCCCCc
Q psy14221 335 TVNGCTSCNCNRD--GSLHFSCDVHTGQCSCKPNMT-GLACDQ 374 (546)
Q Consensus 335 ~~~~C~~~~C~~~--g~c~~~C~~~~~~C~C~~g~~-G~~C~~ 374 (546)
.+++|.+.||.++ |+|.+. ...|.|.|++||+ |.+|+.
T Consensus 10 ~~d~C~snPC~nga~gtC~~~--~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKET--NSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEEC--SSEEEEECCTTEEEEECSSS
T ss_pred CCCcCcCCCCcCCCccccccC--CCceEeECCCCCccCCCCCC
Confidence 4578889999998 877654 5678999999999 999874
No 84
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.22 E-value=0.00097 Score=49.40 Aligned_cols=39 Identities=15% Similarity=0.277 Sum_probs=30.5
Q ss_pred CCCccCCCCCCCCccccc---cCCCceEEcCCCccCCCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDEC---DSISGQCQCKENRAGRTCNLA 286 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c---~~~~~~C~C~~g~~G~~C~~~ 286 (546)
++|.+.||.++|+|...- ....++|.|++||+|.+|+..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 48 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN 48 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcC
Confidence 356778999999887521 245789999999999999843
No 85
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.95 E-value=0.004 Score=64.19 Aligned_cols=66 Identities=23% Similarity=0.422 Sum_probs=46.2
Q ss_pred CCccCCCCCCCCccccccCCCceEEcCCCcc---CCCCCCCCCCC-CCCCCCCCCCCCCCCCcCCCcEEecCCCCcCC
Q psy14221 249 DCKPCECNTSGSLGDECDSISGQCQCKENRA---GRTCNLALDCP-PCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGD 322 (546)
Q Consensus 249 ~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~---G~~C~~~~~C~-~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~ 322 (546)
+|...++.....|..+ .+.|.|.|++||+ |..|+...+|. +.+|.+ +|.. ..++|.|.|.+||++.
T Consensus 2 eC~~~~~~c~~~C~~~--~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n----~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDL--KIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVN----LEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CTTTTGGGCSSEEEEC--SSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBC----CSSSCBCCCCTTCCCC
T ss_pred cccCCCCCCCCEeECC--CCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCC----Cccceeeecccccccc
Confidence 4544444333445442 5679999999998 88998777786 466764 5632 2378999999999875
No 86
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.91 E-value=0.0022 Score=45.64 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=27.2
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
+.||.++|+|...-....++|+|++||+|.+|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 5689999988632235678999999999999985
No 87
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.86 E-value=0.0046 Score=63.73 Aligned_cols=66 Identities=17% Similarity=0.275 Sum_probs=45.8
Q ss_pred CCCCCCCCCCCCcceecCCCCCeeeeCCCCC---CCCCCcCCCCCcCCCCCCCC-CCCCCCCcccCCccccCCceEecCC
Q psy14221 338 GCTSCNCNRDGSLHFSCDVHTGQCSCKPNMT---GLACDQCTEGHWGLQELGCA-SCECNAVGSVNNSCDQITGQCVCRK 413 (546)
Q Consensus 338 ~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~---G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~c~~~~~~C~C~~ 413 (546)
+|...++...+.|.++ ..+|.|.|++||. |..|+. +++|. +.+|.+ .|..+ ..+|.|.|.+
T Consensus 2 eC~~~~~~c~~~C~~~--~~~y~C~C~~G~~~~~~~~C~d---------ideC~~~~~C~~--~C~n~--~g~~~C~C~~ 66 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDL--KIGYECLCPDGFQLVAQRRCED---------IDECQDPDTCSQ--LCVNL--EGGYKCQCEE 66 (400)
T ss_dssp CTTTTGGGCSSEEEEC--SSSEEEECCTTEEECSSSCEEE---------CCCCSTTSSCSS--CCBCC--SSSCBCCCCT
T ss_pred cccCCCCCCCCEeECC--CCCeEEECCCCCCcCCCCcccC---------chhhhccCCCCC--ccCCC--ccceeeeccc
Confidence 4555554444555543 5678999999998 777763 66676 356654 55554 5689999999
Q ss_pred CCcCC
Q psy14221 414 GVTGR 418 (546)
Q Consensus 414 G~~G~ 418 (546)
||++.
T Consensus 67 g~~~~ 71 (400)
T 3p5b_L 67 GFQLD 71 (400)
T ss_dssp TCCCC
T ss_pred ccccc
Confidence 99875
No 88
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.48 E-value=0.0028 Score=64.97 Aligned_cols=72 Identities=25% Similarity=0.479 Sum_probs=17.2
Q ss_pred CCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCC----CCCCCcCCCCCcCCCCCCCC-CCCCCCCcccCCccccCCceE
Q psy14221 335 TVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMT----GLACDQCTEGHWGLQELGCA-SCECNAVGSVNNSCDQITGQC 409 (546)
Q Consensus 335 ~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~----G~~C~~C~~g~~g~~~~~C~-~~~C~~~g~c~~~c~~~~~~C 409 (546)
++++|...++.....|.+. ..+++|.|++||+ |..|+ ++++|. ..+|.+. |..+ ..+|+|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~--~g~~~C~C~~G~~l~~~~~~C~---------d~~eC~~~~~C~~~--C~~~--~g~~~C 66 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMI--RGAVQCTCHTGYRLTEDGRTCQ---------DVNECAEEGYCSQG--CTNS--EGAFQC 66 (386)
T ss_dssp -------------------------------------------------------------CCTTE--EC-------CCE
T ss_pred CcCcccCCCCCCCCCCcCC--CCCcEeECCCCceECCCCCccC---------ccceeCCcCcccCc--CCCC--CCCCeE
Confidence 3566765443222333221 3458999999998 88886 366675 4567653 5444 567899
Q ss_pred ecCCCCc----CCCCC
Q psy14221 410 VCRKGVT----GRTCD 421 (546)
Q Consensus 410 ~C~~G~~----G~~C~ 421 (546)
.|++||+ |..|+
T Consensus 67 ~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 67 WCEAGYELRPDRRSCK 82 (386)
T ss_dssp ECCTTEEECTTSSCEE
T ss_pred EECCCceEcCCCCeEC
Confidence 9999998 77775
No 89
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.44 E-value=0.0032 Score=44.76 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=26.4
Q ss_pred CCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 389 SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
+.+|.|+|+|...-....+.|.|++||+|.+|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 4689999988621124468999999999999985
No 90
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.33 E-value=0.0032 Score=64.58 Aligned_cols=54 Identities=24% Similarity=0.541 Sum_probs=17.4
Q ss_pred CCCceEEcCCCcc----CCCCCCCCCCC-CCCCCCCCCCCCCCCCcCCCcEEecCCCCc----CCCCCc
Q psy14221 267 SISGQCQCKENRA----GRTCNLALDCP-PCDCDPLGTLSVPQPCHPVSGTCYCQPGVT----GDRCDQ 326 (546)
Q Consensus 267 ~~~~~C~C~~g~~----G~~C~~~~~C~-~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~----G~~C~~ 326 (546)
.++++|.|++||+ |..|+...+|. ..+|.+. |.. ..++|+|.|++||+ |..|+.
T Consensus 21 ~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~--C~~----~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 21 RGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--CTN----SEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp -------------------------------CCTTE--EC---------CCEECCTTEEECTTSSCEEE
T ss_pred CCCcEeECCCCceECCCCCccCccceeCCcCcccCc--CCC----CCCCCeEEECCCceEcCCCCeECC
Confidence 4568999999998 89998777786 5677653 522 23789999999998 777753
No 91
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.15 E-value=0.011 Score=50.02 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=42.0
Q ss_pred CCCCCCCccccccCCCc-eEEcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 254 ECNTSGSLGDECDSISG-QCQCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 254 ~C~~~g~c~~~c~~~~~-~C~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
||.++|+|...-....+ +|.|++||+|.+|++... .+|..+ .+ ..|++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~---~~C~~g-----~G----~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS---KTCYEG-----NG----HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS---CCSBCS-----SC----TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc---CCCccc-----cc----ccceeeccccccCCcccC
Confidence 78999988652111345 999999999999996432 133321 11 467888888899988874
No 92
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.88 E-value=0.015 Score=49.15 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=41.8
Q ss_pred CCCCCcccCCccccCCc-eEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 391 ECNAVGSVNNSCDQITG-QCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 391 ~C~~~g~c~~~c~~~~~-~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
||.|+|+|...-....+ +|.|++||+|.+|+.-.. ..|....| ..|++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-------------~~C~~g~G----~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-------------KTCYEGNG----HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-------------CCSBCSSC----TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-------------CCCccccc----ccceeeccccccCCcccC
Confidence 78999988543101244 899999999999985111 02512212 468999999999999975
No 93
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.40 E-value=0.0092 Score=43.20 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=25.1
Q ss_pred CCCCCCCccccc--cCCCceEEcCCCccCCCCCC
Q psy14221 254 ECNTSGSLGDEC--DSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 254 ~C~~~g~c~~~c--~~~~~~C~C~~g~~G~~C~~ 285 (546)
+|.|+|+|...- ....+.|.|++||+|.+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 799999886321 23457999999999999985
No 94
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.27 E-value=0.0097 Score=43.10 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=25.0
Q ss_pred CCCCCcccCCcc--ccCCceEecCCCCcCCCCCC
Q psy14221 391 ECNAVGSVNNSC--DQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 391 ~C~~~g~c~~~c--~~~~~~C~C~~G~~G~~C~~ 422 (546)
+|.|+|+|...- ....+.|.|++||+|.+||.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 799999986321 13357899999999999984
No 95
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.63 E-value=0.017 Score=51.21 Aligned_cols=42 Identities=19% Similarity=0.406 Sum_probs=32.0
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCPP 291 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~~ 291 (546)
.+|.+.+|.++++|... .+.+.|+|++||+|..||..++|.+
T Consensus 120 ~~c~~~~C~~~g~C~~~--~~~~~c~C~~g~~G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLET--IGNYTCSCYPGFYGPECEYVRDDDD 161 (162)
T ss_dssp CCCCTTGGGGSEEEEEC--SSSEEEEECTTEESTTSCEECC---
T ss_pred CCCcCCCCCCCCEEecC--CCCceEeCCCCCcCcccccCcccCC
Confidence 35667788888888763 5679999999999999998766653
No 96
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=93.23 E-value=0.053 Score=48.72 Aligned_cols=27 Identities=33% Similarity=0.792 Sum_probs=24.8
Q ss_pred cccCCCCcccCCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCSEESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~~~~~~C~C~~g~~G~~C~~ 468 (546)
.| .|+|.|. ..++|.|++||+|.+|++
T Consensus 154 ~C-~ngG~Cv-~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 154 GC-RNGGFCN-ERRICECPDGFHGPHCEG 180 (188)
T ss_dssp CC-CTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred CC-CCCCEeC-CCCcccCcCCCCCCCCcC
Confidence 58 8999998 689999999999999985
No 97
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=91.22 E-value=0.044 Score=48.43 Aligned_cols=35 Identities=29% Similarity=0.633 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 288 DCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 288 ~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
.|.+.||.++++|.... ..++|.|++||+|.+||.
T Consensus 121 ~c~~~~C~~~g~C~~~~----~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETI----GNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp CCCTTGGGGSEEEEECS----SSEEEEECTTEESTTSCE
T ss_pred CCcCCCCCCCCEEecCC----CCceEeCCCCCcCccccc
Confidence 36667888888884433 789999999999999985
No 98
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.74 E-value=0.12 Score=35.86 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=23.9
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccCCCCCCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAGRTCNLA 286 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~ 286 (546)
..|.++ .|...-+.....|.|++||+|.+|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 355554 665443456789999999999999853
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.72 E-value=0.1 Score=36.39 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=23.6
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
..|.+ |.|...-+.....|.|++||+|.+||.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 45666 667543344567999999999999985
No 100
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=89.63 E-value=0.19 Score=43.67 Aligned_cols=62 Identities=21% Similarity=0.380 Sum_probs=38.1
Q ss_pred CCCCCCCCCCCCCCCCcCCCc-EEecCCCCcCCCCCcCCCCCCccCCCCCCCCCCCCCCCcceecCCCCCeeeeCCCCCC
Q psy14221 291 PCDCDPLGTLSVPQPCHPVSG-TCYCQPGVTGDRCDQCDTGYWNFTVNGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTG 369 (546)
Q Consensus 291 ~~~C~~~g~c~~~~~C~~~~~-~C~C~~g~~G~~C~~C~~g~~g~~~~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G 369 (546)
.+||.|+|+|...... ..+ +|.|++||.|.+|++ ++++ .|..+. -..|+......++|
T Consensus 12 ~cpC~NGGtC~~~~~~--s~~~~C~Cp~g~~G~~Cei--------~~~~----~C~~g~-------G~~YrG~~s~T~sG 70 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYF--SNIHWCNCPKKFGGQHCEI--------DKSK----TCYEGN-------GHFYRGKASTDTMG 70 (145)
T ss_dssp CCCCCTTCEEEECSSS--TTCEEEECCTTEESTTSCE--------ESSC----CEECTT-------CTTCCSCCCBBTTS
T ss_pred CCCCCCCCCcCCCccc--cCCccccCCCCCCCCceec--------cccc----cCCCCC-------ccccccceecCCcC
Confidence 3489999988432211 233 899999999999986 3221 233321 13455566666777
Q ss_pred CCCC
Q psy14221 370 LACD 373 (546)
Q Consensus 370 ~~C~ 373 (546)
..|+
T Consensus 71 ~~Cq 74 (145)
T 2i9a_A 71 RPCL 74 (145)
T ss_dssp CBCC
T ss_pred Cccc
Confidence 7776
No 101
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=89.56 E-value=0.15 Score=38.96 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=23.8
Q ss_pred cCCCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 252 PCECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 252 ~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
...|.++ .|...-+...+.|.|.+||+|.+|+.
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 4566664 67443334567999999999999974
No 102
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.51 E-value=0.23 Score=44.64 Aligned_cols=29 Identities=28% Similarity=0.641 Sum_probs=20.1
Q ss_pred CCCCCCCCCcccCCCCeeecCCCccCCCCC
Q psy14221 133 CSPYGSVSDECHEESGQCNCRIGITGRDCS 162 (546)
Q Consensus 133 C~~~~~~~~~C~~~~g~C~C~~G~~G~~C~ 162 (546)
|....+++|.| ..+++|.|++||+|..|+
T Consensus 151 C~~~C~ngG~C-v~P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 151 CPGGCRNGGFC-NERRICECPDGFHGPHCE 179 (188)
T ss_dssp CTTCCCTTCEE-CTTSCEECCTTCBTTTTC
T ss_pred cCCCCCCCCEe-CCCCcccCcCCCCCCCCc
Confidence 33333347888 567788888888888776
No 103
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=88.97 E-value=0.15 Score=54.73 Aligned_cols=37 Identities=24% Similarity=0.582 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCcceecCCCCCeeeeC-CCCCCCCCCc
Q psy14221 337 NGCTSCNCNRDGSLHFSCDVHTGQCSCK-PNMTGLACDQ 374 (546)
Q Consensus 337 ~~C~~~~C~~~g~c~~~C~~~~~~C~C~-~g~~G~~C~~ 374 (546)
++|.+.||.|+|+|... ....|.|.|+ +||+|.+|+.
T Consensus 2 d~C~s~PC~ngG~C~~~-~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMST-GFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEE-ETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCEeeCC-CCCCeEEecCCCCccCCCCCC
Confidence 67889999999966632 1357899999 9999999993
No 104
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=88.71 E-value=0.21 Score=34.69 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=22.7
Q ss_pred CCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 390 CECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 390 ~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
..|.++ +|...-+.....|.|++||+|.+|+.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 346664 66543233467999999999999984
No 105
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=88.21 E-value=0.15 Score=35.53 Aligned_cols=32 Identities=28% Similarity=0.650 Sum_probs=22.5
Q ss_pred CCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 390 CECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 390 ~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
..|.+ |+|...-+.....|.|++||+|.+||.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 45666 666432223456899999999999984
No 106
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=88.21 E-value=0.18 Score=54.06 Aligned_cols=36 Identities=19% Similarity=0.471 Sum_probs=30.5
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcC-CCccCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCK-ENRAGRTCN 284 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~g~~G~~C~ 284 (546)
++|.+.||.++|+|... ..+.|.|.|+ +||+|.+|+
T Consensus 2 d~C~s~PC~ngG~C~~~-~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMST-GFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEE-ETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCEeeCC-CCCCeEEecCCCCccCCCCC
Confidence 57889999999998742 1357999999 999999999
No 107
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=87.96 E-value=0.27 Score=47.61 Aligned_cols=58 Identities=28% Similarity=0.685 Sum_probs=36.0
Q ss_pred CceEecCCCCcCCCCCCCCCCCCCC--CCCCcccC---CcccCCCCcccCCCCeEeCCCCC------ccCCCC
Q psy14221 406 TGQCVCRKGVTGRTCDKCRPDYFGF--SVNGCTEC---ASCEQSGMVCSEESGQCVCPPLT------RGDLCI 467 (546)
Q Consensus 406 ~~~C~C~~G~~G~~C~~C~~~~~g~--~~~~C~~c---~~C~~~~g~C~~~~~~C~C~~g~------~G~~C~ 467 (546)
-+.|.|.+||+|..|+ |....... ....|..- ..| +++|+|. -++|.|.++| .|.+|+
T Consensus 206 CG~C~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~C-SgrG~C~--CG~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 206 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIIC-SGLGDCV--CGQCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp TTEEEECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGG-GGSEEEE--TTEEEECCCSSTTCEEESTTSC
T ss_pred CCceeCCCCCcCCcce-ecCCccccccccccCCCCCCCCcc-CCCceEe--CCeeECcCCCCCCeeEeeEecc
Confidence 4689999999999997 22211000 00024311 147 7788884 6899998776 566665
No 108
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=87.78 E-value=0.18 Score=53.93 Aligned_cols=38 Identities=21% Similarity=0.435 Sum_probs=32.1
Q ss_pred CCCCccCCCCCCCCccccccCCCceEEcC-CCccCCCCCC
Q psy14221 247 TGDCKPCECNTSGSLGDECDSISGQCQCK-ENRAGRTCNL 285 (546)
Q Consensus 247 ~~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~g~~G~~C~~ 285 (546)
.++|.+.||.++|+|... ..+.|+|.|+ +||+|.+||.
T Consensus 2 ~d~C~~~PC~ngG~C~~~-~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRF-GLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEE-TTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCC-CCCceEeeCCCCCcCCCCCCC
Confidence 357889999999999762 3567999999 9999999994
No 109
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=87.49 E-value=0.34 Score=41.99 Aligned_cols=63 Identities=19% Similarity=0.361 Sum_probs=40.2
Q ss_pred CCCCCCCcccCCccccCCc-eEecCCCCcCCCCCCCCCCCCCCCCCCcccCCcccCCCCcccCCCCeEeCCCCCccCCCC
Q psy14221 389 SCECNAVGSVNNSCDQITG-QCVCRKGVTGRTCDKCRPDYFGFSVNGCTECASCEQSGMVCSEESGQCVCPPLTRGDLCI 467 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~-~C~C~~G~~G~~C~~C~~~~~g~~~~~C~~c~~C~~~~g~C~~~~~~C~C~~g~~G~~C~ 467 (546)
.++|.|+|+|...--...+ .|.|++||.|..|+.-.. ..|....| ..|+......++|..|+
T Consensus 12 ~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~-------------~~C~~g~G----~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-------------KTCYEGNG----HFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS-------------CCEECTTC----TTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCCCcCCCccccCCccccCCCCCCCCceecccc-------------ccCCCCCc----cccccceecCCcCCccc
Confidence 4589999988432001233 799999999999985111 02522222 35677777778888886
Q ss_pred C
Q psy14221 468 Q 468 (546)
Q Consensus 468 ~ 468 (546)
.
T Consensus 75 ~ 75 (145)
T 2i9a_A 75 P 75 (145)
T ss_dssp C
T ss_pred C
Confidence 4
No 110
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=87.25 E-value=0.31 Score=33.82 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=23.5
Q ss_pred CCCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 253 CECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 253 ~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
..|.+ |.|..+-+.....|.|++||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 45665 477543345567999999999999984
No 111
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=86.92 E-value=0.31 Score=33.82 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=20.8
Q ss_pred cccCCCCccc----CCCCeEeCCCCCccCCCCC
Q psy14221 440 SCEQSGMVCS----EESGQCVCPPLTRGDLCIQ 468 (546)
Q Consensus 440 ~C~~~~g~C~----~~~~~C~C~~g~~G~~C~~ 468 (546)
.| .+ |+|. .....|.|++||+|.+|+.
T Consensus 19 yC-~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 19 FC-IH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp TC-SS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred cC-CC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 47 44 6896 2346899999999999984
No 112
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=86.92 E-value=0.31 Score=37.24 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=23.5
Q ss_pred CCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 389 SCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 389 ~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
...|.++ +|...-+...+.|.|.+||+|.+|+.
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 4567774 67443233457899999999999973
No 113
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=86.89 E-value=0.19 Score=53.69 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCCcccCCccccCCceEecC-CCCcCCCCCC
Q psy14221 384 ELGCASCECNAVGSVNNSCDQITGQCVCR-KGVTGRTCDK 422 (546)
Q Consensus 384 ~~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~G~~G~~C~~ 422 (546)
.+.|.+.||.|+|+|... ....|+|.|+ +||+|.+||.
T Consensus 2 ~d~C~~~PC~ngG~C~~~-~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRF-GLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEE-TTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCC-CCCceEeeCCCCCcCCCCCCC
Confidence 356888999999999762 1457899999 9999999985
No 114
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=86.37 E-value=0.074 Score=57.70 Aligned_cols=45 Identities=24% Similarity=0.469 Sum_probs=38.7
Q ss_pred EcCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcEEecCCCCcCCCCCc
Q psy14221 273 QCKENRAGRTCNLALDCPPCDCDPLGTLSVPQPCHPVSGTCYCQPGVTGDRCDQ 326 (546)
Q Consensus 273 ~C~~g~~G~~C~~~~~C~~~~C~~~g~c~~~~~C~~~~~~C~C~~g~~G~~C~~ 326 (546)
.|.+||+|++|.+...|.. .|.++|.| ..++|+|.+||+|..|+.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~-~C~ghG~C--------~~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLD-MCSGHGRC--------VQGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEESCSSG-GGGGSEEE--------ETTEEEECTTEESTTSCE
T ss_pred ccCCCcccccccccCCCCc-ccCCCcEE--------CCCCEeeCCCccCCCcCc
Confidence 7899999999986666764 78888877 678999999999999985
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=86.07 E-value=0.29 Score=43.10 Aligned_cols=40 Identities=23% Similarity=0.536 Sum_probs=29.5
Q ss_pred CCccCCCCCCCCccccccCCCceEEcCCCccCCCCCCCCCCC
Q psy14221 249 DCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNLALDCP 290 (546)
Q Consensus 249 ~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~~~~C~ 290 (546)
.|.+.+|.++|.|... ...+.|.|++||+|..|+....|.
T Consensus 121 ~~~~~~C~~~g~C~~~--~~~~~c~C~~g~~g~~C~~~~~c~ 160 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEI--INNYTCNCDVGYYGPQCQFVQVDP 160 (164)
T ss_dssp CCCTTSSCSSEEEEEE--TTEEEEEECTTCBSSSSCBC----
T ss_pred CCCCCcCCCCCeeccc--CCCceeeeCCCcccccccccccCc
Confidence 3556788888888764 567999999999999999766664
No 116
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=85.82 E-value=0.38 Score=46.52 Aligned_cols=57 Identities=32% Similarity=0.790 Sum_probs=37.4
Q ss_pred CCCCCCccccccCCCceEEcCCCccCCCCCC--CC--------CCCCC----CCCCCCCCCCCCCCcCCCcEEecCCCC-
Q psy14221 255 CNTSGSLGDECDSISGQCQCKENRAGRTCNL--AL--------DCPPC----DCDPLGTLSVPQPCHPVSGTCYCQPGV- 319 (546)
Q Consensus 255 C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~--~~--------~C~~~----~C~~~g~c~~~~~C~~~~~~C~C~~g~- 319 (546)
|+++|++. -++|.|.+||+|..|+- .. .|... .|+++|+| .-++|.|.+.+
T Consensus 198 C~g~G~~~------CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C--------~CG~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLE------CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC--------VCGQCLCHTSDV 263 (280)
T ss_dssp GGGSEEEE------TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEE--------ETTEEEECCCSS
T ss_pred cCCCCeEC------CCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceE--------eCCeeECcCCCC
Confidence 65555442 37899999999999981 11 46522 35555555 56789997775
Q ss_pred -----cCCCCC
Q psy14221 320 -----TGDRCD 325 (546)
Q Consensus 320 -----~G~~C~ 325 (546)
.|..|+
T Consensus 264 ~~~~~~G~~~~ 274 (280)
T 2p26_A 264 PGKLIYGQYCE 274 (280)
T ss_dssp TTCEEESTTSC
T ss_pred CCeeEeeEecc
Confidence 566665
No 117
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=84.40 E-value=0.31 Score=51.94 Aligned_cols=66 Identities=27% Similarity=0.607 Sum_probs=46.4
Q ss_pred CCCCCCcceecCCCCCeeeeCCCCC--CCCCCcCCCCCcCCC--CCCCCCCCCCCCcccCCccccCCceEecCCCCcCC
Q psy14221 344 CNRDGSLHFSCDVHTGQCSCKPNMT--GLACDQCTEGHWGLQ--ELGCASCECNAVGSVNNSCDQITGQCVCRKGVTGR 418 (546)
Q Consensus 344 C~~~g~c~~~C~~~~~~C~C~~g~~--G~~C~~C~~g~~g~~--~~~C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~ 418 (546)
|...| ......|+|.|.+||. +..|+.|++|+|... ...|++||- +.. .-+...+.|.|..||.-.
T Consensus 252 C~~dG----~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~--~S~---s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 252 CAVDG----EWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPE--HTL---PSPEGATSCECEEGFFRA 321 (536)
T ss_dssp ECTTS----CBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCS--SEE---CCCTTCSSCEECTTCBCC
T ss_pred EcCCC----CEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCC--CCC---CCCCCccEEEEecccccc
Confidence 56666 4444579999999997 778999999999875 445765543 221 112357799999998743
No 118
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=81.05 E-value=0.23 Score=53.83 Aligned_cols=44 Identities=20% Similarity=0.397 Sum_probs=29.2
Q ss_pred CCCCCCCCCCCcCCCCCccCCCCCCCCCCccCCCCCCCCCCCcccCCCCeeecCCCccCCCCC
Q psy14221 100 VREPGYTGPLCDRCAYGYFGFPSQPNGSCEPCNCSPYGSVSDECHEESGQCNCRIGITGRDCS 162 (546)
Q Consensus 100 ~C~~g~~G~~C~~C~~g~~~~~~~~~~~C~~~~C~~~~~~~~~C~~~~g~C~C~~G~~G~~C~ 162 (546)
+|.++|+|++|.. ...|. ..|.+ +|+| ..|+|+|.+||+|++|+
T Consensus 521 ~C~~gw~g~dc~i------------~~~Cp-~~C~g----hG~C--~~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYI------------GDGCL-DMCSG----HGRC--VQGSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEE------------ESCSS-GGGGG----SEEE--ETTEEEECTTEESTTSC
T ss_pred ccCCCcccccccc------------cCCCC-cccCC----CcEE--CCCCEeeCCCccCCCcC
Confidence 5777777777762 11232 14554 7888 55788888888888776
No 119
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=78.48 E-value=0.93 Score=39.20 Aligned_cols=56 Identities=27% Similarity=0.709 Sum_probs=35.4
Q ss_pred CcccCCcccCCCCc-----cc-CCCCeEeCCCCCc-------cCCCCCCCCCCCCCCCCCCCCCC-cCCC
Q psy14221 434 GCTECASCEQSGMV-----CS-EESGQCVCPPLTR-------GDLCIQCAPNSYGYRPLLGCQPC-RCDL 489 (546)
Q Consensus 434 ~C~~c~~C~~~~g~-----C~-~~~~~C~C~~g~~-------G~~C~~C~~~~~g~~~~~~C~~c-~c~~ 489 (546)
.|.+|..|+...+. |. ...-+|.|++||. +..|..|+.|+|.......|+++ .|..
T Consensus 56 ~C~~C~~C~~~~g~~~~~~Ct~t~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtfs~~~~~~C~~~t~C~~ 125 (146)
T 2hey_R 56 PCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTL 125 (146)
T ss_dssp CCEECCCCCGGGTEEEEECCBTTBCCEEEECTTEEESCSSSTTSSEEECCTTEECCSTTCCCEECCCTTT
T ss_pred cCcccCCCCCCCCceEeccCccCCCccccCCCCeeeCCCcccCcccccCCCCcccCCCCCCCcCCCCCCc
Confidence 36665556332121 44 2345799999974 34688899999887655567776 4653
No 120
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=77.28 E-value=0.62 Score=40.49 Aligned_cols=36 Identities=19% Similarity=0.526 Sum_probs=28.7
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcCCCccCCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCKENRAGRTCNL 285 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~~C~~ 285 (546)
..|.+.||.+++.|... ...+.|.|.+||+|..||+
T Consensus 120 ~~~~~~pc~~~g~C~~~--~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 120 AACTNTSCSGHGECVET--INNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCCTTGGGGSEEEEEE--TTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCCEeecC--CCCeeEECCCCccCccccc
Confidence 34566788888877663 6788999999999999985
No 121
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=77.23 E-value=0.76 Score=48.89 Aligned_cols=57 Identities=25% Similarity=0.673 Sum_probs=41.6
Q ss_pred CCcEEecCCCCc--CCCCCcCCCCCCccCC--CCCCCCCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 309 VSGTCYCQPGVT--GDRCDQCDTGYWNFTV--NGCTSCNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 309 ~~~~C~C~~g~~--G~~C~~C~~g~~g~~~--~~C~~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
..++|.|.+||. +..|+.|++|||.... ..|.+||-+... -+...+.|.|..+|.-.
T Consensus 261 p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s-----~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 261 PIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLP-----SPEGATSCECEEGFFRA 321 (536)
T ss_dssp CBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEEC-----CCTTCSSCEECTTCBCC
T ss_pred ccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCC-----CCCCccEEEEecccccc
Confidence 578999999998 6779999999987643 457665543322 13467899999998643
No 122
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=75.50 E-value=0.83 Score=45.15 Aligned_cols=38 Identities=32% Similarity=0.878 Sum_probs=31.0
Q ss_pred eCCCC--CCCcCCCCC--cccCCCCCcCCCCCCcCCCCcccCC
Q psy14221 207 PCSCG--GGPCDASTG--ECVQCRGNTEGARCERCKPLYYGDP 245 (546)
Q Consensus 207 ~C~C~--~~~C~~~~g--~C~~C~~g~~G~~Ce~C~~G~~g~~ 245 (546)
+|.|+ ...|....+ .|. |++++.|.+||+|.++|++.+
T Consensus 269 ~C~CnGHA~~C~~~~g~~~C~-C~HnT~G~~Ce~C~p~y~~~p 310 (338)
T 3tbd_A 269 RCKCNLHANLCSMREGSLQCE-CEHNTTGPDCGKCKKNFRTRS 310 (338)
T ss_dssp EECCTTBCSCEEEETTEEEEC-CCTTEESTTSCEECTTCBSSC
T ss_pred cccccCCcCccCCCCCCceec-CCCCCCCCCCcccCccccCCC
Confidence 46676 567765554 695 999999999999999999987
No 123
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=75.40 E-value=1.2 Score=30.77 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=17.5
Q ss_pred CCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 342 CNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 342 ~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
.+|. ..|.++ ..+|+|.|++||++.
T Consensus 20 ~~C~--~~C~n~--~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNY--VGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEE--TTEEEEECSTTCEEC
T ss_pred CCCC--CEeECC--CCCeEEECCCCCeEC
Confidence 3565 345543 577899999999864
No 124
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=75.21 E-value=1.2 Score=39.10 Aligned_cols=34 Identities=24% Similarity=0.535 Sum_probs=26.8
Q ss_pred CCCCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 387 CASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 387 C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
|.+.+|.++++|... ...++|.|.+||+|..|+.
T Consensus 122 ~~~~~C~~~g~C~~~--~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 122 CQPWSCSGHGECVEI--INNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp CCTTSSCSSEEEEEE--TTEEEEEECTTCBSSSSCB
T ss_pred CCCCcCCCCCeeccc--CCCceeeeCCCcccccccc
Confidence 444678888877654 4578999999999999985
No 125
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=73.00 E-value=1.3 Score=35.20 Aligned_cols=70 Identities=17% Similarity=0.310 Sum_probs=38.1
Q ss_pred CccCCCCCCCCccccccCCCceEEcCCCccCC--CCCCC--CCCCCCC--CCCCCCCCCCCCCc-CCCcEEecCCCCc
Q psy14221 250 CKPCECNTSGSLGDECDSISGQCQCKENRAGR--TCNLA--LDCPPCD--CDPLGTLSVPQPCH-PVSGTCYCQPGVT 320 (546)
Q Consensus 250 C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~--~C~~~--~~C~~~~--C~~~g~c~~~~~C~-~~~~~C~C~~g~~ 320 (546)
|....|..++.|... +.+...|.|.+||.|+ .|... ..|..++ |..++.|.....=+ ...-.|.|.+||+
T Consensus 7 C~~~~C~~NA~C~r~-~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRH-LDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCCCCTTEEEECC-TTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eccCCCCCCCCeEEc-CCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 444556666666332 4567899999999864 34332 2344321 44444442221000 0346899988865
No 126
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=72.95 E-value=0.83 Score=39.64 Aligned_cols=34 Identities=24% Similarity=0.698 Sum_probs=26.6
Q ss_pred CCCCCCCCCcccCCccccCCceEecCCCCcCCCCCC
Q psy14221 387 CASCECNAVGSVNNSCDQITGQCVCRKGVTGRTCDK 422 (546)
Q Consensus 387 C~~~~C~~~g~c~~~c~~~~~~C~C~~G~~G~~C~~ 422 (546)
|.+.+|.+++.|... ...+.|.|.+||+|..||.
T Consensus 122 ~~~~pc~~~g~C~~~--~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 122 CTNTSCSGHGECVET--INNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCTTGGGGSEEEEEE--TTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCEeecC--CCCeeEECCCCccCccccc
Confidence 445678777877654 4578999999999999984
No 127
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=69.54 E-value=4.2 Score=32.36 Aligned_cols=52 Identities=19% Similarity=0.438 Sum_probs=32.1
Q ss_pred CCcEEecCCCCcCC--CCCcCCCCCCccCCCCCCCCC--CCCCCCcceecCC----CCCeeeeCCCCC
Q psy14221 309 VSGTCYCQPGVTGD--RCDQCDTGYWNFTVNGCTSCN--CNRDGSLHFSCDV----HTGQCSCKPNMT 368 (546)
Q Consensus 309 ~~~~C~C~~g~~G~--~C~~C~~g~~g~~~~~C~~~~--C~~~g~c~~~C~~----~~~~C~C~~g~~ 368 (546)
+...|+|.+||.|+ .|.. ...+.|...+ |..++.|... ++ ....|.|.++|+
T Consensus 24 g~e~C~C~~gy~gdg~~Cv~-------~~~~sC~~nNGGCd~nA~C~~~-~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 24 EREECKCLLNYKQEGDKCVE-------NPNPTCNENNGGCDADAKCTEE-DSGSNGKKITCECTKPDS 83 (99)
T ss_dssp SCCEEEECTTEEEETTEEEE-------CSCCCSTTGGGGCCTTEEEECC-SCSSSSCCCEEEECSTTC
T ss_pred CCEEEEecCCeecCCCeEee-------CCCCChhhcCCCcCCCceeEec-CCcccCCceEeEeCCCCc
Confidence 78899999999974 2332 0113565432 7777744432 12 346899999965
No 128
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=68.31 E-value=2 Score=38.25 Aligned_cols=52 Identities=23% Similarity=0.597 Sum_probs=29.1
Q ss_pred CCCCcCCCCCccCCCCCCCCCCccCC--CCCCCCCCCcccCC-CCeeecCCCccC
Q psy14221 107 GPLCDRCAYGYFGFPSQPNGSCEPCN--CSPYGSVSDECHEE-SGQCNCRIGITG 158 (546)
Q Consensus 107 G~~C~~C~~g~~~~~~~~~~~C~~~~--C~~~~~~~~~C~~~-~g~C~C~~G~~G 158 (546)
...|+.|.+|.|...-.....|.++. |.........|... .-+|.|++||+=
T Consensus 38 ~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC~C~~G~~~ 92 (171)
T 3urf_Z 38 KTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYL 92 (171)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEEEECCCSSSCCEEEECTTEEE
T ss_pred CCccccCCCCcEecCCCCCCccccCcCccCCCCEEeccCcCCCCccccCCCCcEE
Confidence 45677788888765422235676654 54310011234332 237999999884
No 129
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=68.13 E-value=2.5 Score=43.04 Aligned_cols=36 Identities=22% Similarity=0.451 Sum_probs=30.7
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcCC-CccCCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCKE-NRAGRTCNL 285 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~-g~~G~~C~~ 285 (546)
+.|.+.||.++|.|... ...+.|.|+. +|+|+.|+.
T Consensus 186 ~~C~~~pC~n~g~C~~~--~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQ--WDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SCCCTTSSSTTCEEEEC--SSSEEEECTTTSEESTTSCE
T ss_pred CCcccccCCCCCEecCC--CCCceEeccCCcccCCCCCC
Confidence 56888999999999763 6789999996 999999984
No 130
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=67.89 E-value=2 Score=29.58 Aligned_cols=15 Identities=13% Similarity=0.211 Sum_probs=12.9
Q ss_pred CCCceEEcCCCccCC
Q psy14221 267 SISGQCQCKENRAGR 281 (546)
Q Consensus 267 ~~~~~C~C~~g~~G~ 281 (546)
.++|+|.|++||++.
T Consensus 30 ~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 30 VGGYFCSCRPGYELQ 44 (53)
T ss_dssp TTEEEEECSTTCEEC
T ss_pred CCCeEEECCCCCeEC
Confidence 678999999999864
No 131
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=65.09 E-value=2.8 Score=37.46 Aligned_cols=51 Identities=24% Similarity=0.544 Sum_probs=27.8
Q ss_pred CCCCcCCCCCccCCCCCCCCCCccCC--CCCCCCCCCcccCC-CCeeecCCCcc
Q psy14221 107 GPLCDRCAYGYFGFPSQPNGSCEPCN--CSPYGSVSDECHEE-SGQCNCRIGIT 157 (546)
Q Consensus 107 G~~C~~C~~g~~~~~~~~~~~C~~~~--C~~~~~~~~~C~~~-~g~C~C~~G~~ 157 (546)
...|+.|.+|.|...-.....|.++. |...-.....|... .-+|.|++||+
T Consensus 40 ~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~~~~Ct~tsdtvC~C~~G~~ 93 (176)
T 3k51_B 40 PTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTGFF 93 (176)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCSSEEEEECCBTTBCCEEEECTTEE
T ss_pred CCccccCCCCCeecCCCCCCcCccccCcCCCCCEEeccCcCCCCceeeccCCee
Confidence 45677788888765422234576553 44200001224333 23799999988
No 132
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=63.12 E-value=1.5 Score=42.30 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=25.3
Q ss_pred CCCCCC--CCCCCCCCCcceecCCCCCeeeeCCCCCCC
Q psy14221 335 TVNGCT--SCNCNRDGSLHFSCDVHTGQCSCKPNMTGL 370 (546)
Q Consensus 335 ~~~~C~--~~~C~~~g~c~~~C~~~~~~C~C~~g~~G~ 370 (546)
++|+|. ..+|+.+++|.++ ..+|.|.|++||+|+
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt--~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDY--ATGFCCRCVANYTGN 39 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEEC--SSCEEEEECTTEEEC
T ss_pred cchhccCCCCCCCCCCEeEcC--CCCeEEEcCCCCCCC
Confidence 567886 5679988877764 678999999999854
No 133
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=61.84 E-value=3.5 Score=41.95 Aligned_cols=36 Identities=19% Similarity=0.433 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCcccCCccccCCceEecCC-CCcCCCCCC
Q psy14221 385 LGCASCECNAVGSVNNSCDQITGQCVCRK-GVTGRTCDK 422 (546)
Q Consensus 385 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~-G~~G~~C~~ 422 (546)
+.|...+|.++|+|... ...+.|.|+. +|+|..|+.
T Consensus 186 ~~C~~~pC~n~g~C~~~--~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQ--WDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SCCCTTSSSTTCEEEEC--SSSEEEECTTTSEESTTSCE
T ss_pred CCcccccCCCCCEecCC--CCCceEeccCCcccCCCCCC
Confidence 45778899999999765 4578999996 999999984
No 134
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=61.26 E-value=3.4 Score=36.68 Aligned_cols=11 Identities=27% Similarity=0.779 Sum_probs=8.6
Q ss_pred CceEecCCCCc
Q psy14221 406 TGQCVCRKGVT 416 (546)
Q Consensus 406 ~~~C~C~~G~~ 416 (546)
.-+|.|++||.
T Consensus 81 dtvC~C~~G~~ 91 (171)
T 3urf_Z 81 NRVCECKEGRY 91 (171)
T ss_dssp CCEEEECTTEE
T ss_pred CccccCCCCcE
Confidence 34799999986
No 135
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=58.88 E-value=4.5 Score=39.40 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=28.6
Q ss_pred CCCCcCCCCCccCCCCCCCCCCccCC--CCCCCCCCCcccCC-CCeeecCCCcc
Q psy14221 107 GPLCDRCAYGYFGFPSQPNGSCEPCN--CSPYGSVSDECHEE-SGQCNCRIGIT 157 (546)
Q Consensus 107 G~~C~~C~~g~~~~~~~~~~~C~~~~--C~~~~~~~~~C~~~-~g~C~C~~G~~ 157 (546)
...|..|.+|.|...-.....|.++. |...-.....|... .-+|.|.+||+
T Consensus 44 dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~~~~CT~TsDtvC~C~~G~y 97 (313)
T 3u3p_A 44 LRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDRECTCPPGMF 97 (313)
T ss_dssp CCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEEEECSBTTBCCEEECCTTEE
T ss_pred CCccccCCCCceeccCCCCCcCcccccccCCCCEEecCCcCCCCccccCCCCce
Confidence 45677788888765422235676654 65311112234222 23799999987
No 136
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=56.46 E-value=3 Score=41.12 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=24.5
Q ss_pred cceeecCCCCCCCCCCCCCCCCCCCCCC
Q psy14221 9 NVDLVHSSNVEGRQCDQCRPGSFSLSAD 36 (546)
Q Consensus 9 ~~~C~C~~~~~G~~C~~C~~g~~~~~~~ 36 (546)
++.|.|+++..|.+|++|.|+|++..-.
T Consensus 285 ~~~C~C~HnT~G~~Ce~C~p~y~~~pw~ 312 (338)
T 3tbd_A 285 SLQCECEHNTTGPDCGKCKKNFRTRSWR 312 (338)
T ss_dssp EEEECCCTTEESTTSCEECTTCBSSCCC
T ss_pred CceecCCCCCCCCCCcccCccccCCCCC
Confidence 3579999999999999999999887644
No 137
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=55.19 E-value=2.6 Score=40.56 Aligned_cols=34 Identities=21% Similarity=0.462 Sum_probs=24.8
Q ss_pred CCCCCc--cCCCCCCCCccccccCCCceEEcCCCccCC
Q psy14221 246 RTGDCK--PCECNTSGSLGDECDSISGQCQCKENRAGR 281 (546)
Q Consensus 246 ~~~~C~--~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~ 281 (546)
++++|. ..+|+.++.|..+ .++|.|.|++||+|.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt--~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDY--ATGFCCRCVANYTGN 39 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEEC--SSCEEEEECTTEEEC
T ss_pred cchhccCCCCCCCCCCEeEcC--CCCeEEEcCCCCCCC
Confidence 456775 5678888888764 788999999999853
No 138
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=54.93 E-value=3.8 Score=30.51 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=21.5
Q ss_pred CCCCCCC--CCCCCCCCcceecCCCCCeeee-CCCCCC
Q psy14221 335 TVNGCTS--CNCNRDGSLHFSCDVHTGQCSC-KPNMTG 369 (546)
Q Consensus 335 ~~~~C~~--~~C~~~g~c~~~C~~~~~~C~C-~~g~~G 369 (546)
++++|.. .+|.++++|.++ ..+|+|.+ ..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt--~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINH--YGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEET--TCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECC--CCCeEecccCCcccc
Confidence 4577753 468777766654 67889984 456764
No 139
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=49.92 E-value=6.8 Score=34.85 Aligned_cols=27 Identities=26% Similarity=0.719 Sum_probs=16.1
Q ss_pred cCCCCCCCCCCCCCC--CCCCCCCC-cCCC
Q psy14221 463 GDLCIQCAPNSYGYR--PLLGCQPC-RCDL 489 (546)
Q Consensus 463 G~~C~~C~~~~~g~~--~~~~C~~c-~c~~ 489 (546)
...|+.|++|+|... ....|+++ .|..
T Consensus 120 Dt~C~~C~~GtFs~~~s~~~~C~p~t~C~~ 149 (176)
T 3k51_B 120 NTQCQPCPPGTFSASSSSSEQCQPHRNCTA 149 (176)
T ss_dssp CCEEEECCTTEECCSCSSSCCCEECCCSTT
T ss_pred CCccccCCCCcccCCCCCCCcccCCCccCC
Confidence 345666777777665 24567666 4543
No 140
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=49.66 E-value=14 Score=29.62 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=38.8
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcCCCccCC--CCCCCCC-CCCCCCCCCCCCCCCCCCcC---CCcEEecCCCCc
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCKENRAGR--TCNLALD-CPPCDCDPLGTLSVPQPCHP---VSGTCYCQPGVT 320 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~~g~~G~--~C~~~~~-C~~~~C~~~g~c~~~~~C~~---~~~~C~C~~g~~ 320 (546)
..|....|..++.|... .++.-.|.|..||.|+ .|..... |. .++|-|...+.|.. ..-.|.|.++|.
T Consensus 11 h~C~~t~Cp~NA~C~r~-~~G~e~CrCl~gY~~dg~~Cv~~Np~C~----~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRY-LDGTEEWRCLLGFKEVGGKCVPASITCE----ENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TSCCSSCCCTTEEEEEC-TTSCEEEEECTTEEECSSSEEECCCCTT----SGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred cEecCCCCCCCCCeEEC-CCCCEeEEEECCeeccCCEEEECCcchh----hcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 34544556666656442 3566799999999864 3432222 32 23444544444442 345789988854
No 141
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=47.71 E-value=3.3 Score=35.53 Aligned_cols=11 Identities=18% Similarity=0.483 Sum_probs=8.5
Q ss_pred CceEecCCCCc
Q psy14221 406 TGQCVCRKGVT 416 (546)
Q Consensus 406 ~~~C~C~~G~~ 416 (546)
.-+|.|++||.
T Consensus 78 dtvC~C~~G~y 88 (142)
T 2uwi_A 78 NRICHCDSNSY 88 (142)
T ss_dssp CCEEEECTTEE
T ss_pred CCEeeCCCCcE
Confidence 34788999886
No 142
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=47.41 E-value=15 Score=29.34 Aligned_cols=50 Identities=18% Similarity=0.426 Sum_probs=30.9
Q ss_pred CCcEEecCCCCcCC--CCCcCCCCCCccCCCC-CCCCC--CCCCCCcceecCCCCCeeeeCCCCC
Q psy14221 309 VSGTCYCQPGVTGD--RCDQCDTGYWNFTVNG-CTSCN--CNRDGSLHFSCDVHTGQCSCKPNMT 368 (546)
Q Consensus 309 ~~~~C~C~~g~~G~--~C~~C~~g~~g~~~~~-C~~~~--C~~~g~c~~~C~~~~~~C~C~~g~~ 368 (546)
+.-.|.|..||.++ .|.. ++. |..++ |..++.|... ++..-.|.|.++|.
T Consensus 30 G~e~CrCl~gY~~dg~~Cv~---------~Np~C~~nNGGCd~nAeC~~~-~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 30 GTEEWRCLLGFKEVGGKCVP---------ASITCEENNGGCAPEAECTMD-DKKEVECKCTKEGS 84 (105)
T ss_dssp SCEEEEECTTEEECSSSEEE---------CCCCTTSGGGGSCTTSEEEEC-TTSCEEEECCSTTC
T ss_pred CCEeEEEECCeeccCCEEEE---------CCcchhhcCCCcCCCcEeEEC-CCCEEEeECCCCCC
Confidence 77799999999964 3432 233 44333 6666644432 12345899988864
No 143
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=47.20 E-value=6.8 Score=29.08 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=11.1
Q ss_pred CCCCcCCCCCCcCCCCcccCC
Q psy14221 225 CRGNTEGARCERCKPLYYGDP 245 (546)
Q Consensus 225 C~~g~~G~~Ce~C~~G~~g~~ 245 (546)
|.+...+++|..+..||.++.
T Consensus 19 C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 19 CINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp EEETTCCEEEEETTSCCCSCC
T ss_pred eECCCCCeEecccCCcccccc
Confidence 444555555554555555544
No 144
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=46.95 E-value=8.1 Score=45.45 Aligned_cols=36 Identities=22% Similarity=0.468 Sum_probs=30.9
Q ss_pred CCCccCCCCCCCCccccccCCCceEEcC-CCccCCCCCC
Q psy14221 248 GDCKPCECNTSGSLGDECDSISGQCQCK-ENRAGRTCNL 285 (546)
Q Consensus 248 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~g~~G~~C~~ 285 (546)
+.|.+.||.++|.|... ...+.|.|+ ++|+|+.|+.
T Consensus 1018 ~~C~~~pC~ngG~C~~~--~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQ--WDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp CCCCTTSSSSSCEEEEE--TTEEEEECTTSSCBSTTSCB
T ss_pred CceECCcCCCCCEeCCC--CCCCEEECCCCCCCCCCccC
Confidence 57888999999999764 567999999 6999999985
No 145
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=45.31 E-value=19 Score=31.93 Aligned_cols=28 Identities=18% Similarity=0.629 Sum_probs=5.4
Q ss_pred CccCCCCCCCCCCCCCCC--CCCCCCC-cCC
Q psy14221 461 TRGDLCIQCAPNSYGYRP--LLGCQPC-RCD 488 (546)
Q Consensus 461 ~~G~~C~~C~~~~~g~~~--~~~C~~c-~c~ 488 (546)
.....|+.|++|+|.... ...|+++ .|.
T Consensus 118 ~~dt~C~~C~~Gtfs~~~s~~~~C~p~t~C~ 148 (177)
T 3qd6_R 118 VSDTICEPCPVGFFSNVSSAFEKCHPWTSCE 148 (177)
T ss_dssp SCCCCCCC-----------------------
T ss_pred CCCCccccCCCCcccCCCCCCCcCcCcccCC
Confidence 455678888899887652 4556665 344
No 146
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=45.09 E-value=8.7 Score=33.47 Aligned_cols=52 Identities=27% Similarity=0.662 Sum_probs=23.6
Q ss_pred CCCCcCCCCC-ccCCCCCCCCCCccC-CCCCCCCCCCcccCC-CCeeecCCCccC
Q psy14221 107 GPLCDRCAYG-YFGFPSQPNGSCEPC-NCSPYGSVSDECHEE-SGQCNCRIGITG 158 (546)
Q Consensus 107 G~~C~~C~~g-~~~~~~~~~~~C~~~-~C~~~~~~~~~C~~~-~g~C~C~~G~~G 158 (546)
...|+.|.+| .|...-.....|.++ .|...-.....|... .-+|.|.+||+-
T Consensus 33 ~t~C~~C~~g~ty~~~~~~~~~C~~C~~C~~~~~~~~~Ct~t~d~~C~C~~G~y~ 87 (161)
T 1sg1_X 33 QTVCEPCLDNVTFSDVVSATEPCKPCTECLGLQSMSAPCVEADDAVCRCAYGYYQ 87 (161)
T ss_dssp SCEEEECCTTTEECCSCBSSCCCEECCCCCTTEEEEECCBTTBCCEEEECTTEEE
T ss_pred CCcCcCCcCCCccccCCCCCCcCcCCCCCCCcceeecCCCcccCceeccCCCeEe
Confidence 4456667776 554321112345433 233200001223221 237889999874
No 147
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=42.78 E-value=10 Score=44.67 Aligned_cols=36 Identities=19% Similarity=0.447 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCcccCCccccCCceEecC-CCCcCCCCCC
Q psy14221 385 LGCASCECNAVGSVNNSCDQITGQCVCR-KGVTGRTCDK 422 (546)
Q Consensus 385 ~~C~~~~C~~~g~c~~~c~~~~~~C~C~-~G~~G~~C~~ 422 (546)
+.|...||.++|+|... ...+.|.|+ +||+|..|++
T Consensus 1018 ~~C~~~pC~ngG~C~~~--~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQ--WDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp CCCCTTSSSSSCEEEEE--TTEEEEECTTSSCBSTTSCB
T ss_pred CceECCcCCCCCEeCCC--CCCCEEECCCCCCCCCCccC
Confidence 46888899999999765 346899999 6999999985
No 148
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=35.14 E-value=5.4 Score=35.01 Aligned_cols=13 Identities=23% Similarity=0.534 Sum_probs=11.2
Q ss_pred CCCCeeeeCCCCC
Q psy14221 356 VHTGQCSCKPNMT 368 (546)
Q Consensus 356 ~~~~~C~C~~g~~ 368 (546)
..++.|.|++||+
T Consensus 145 ~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 145 LGGFYCSCRAGYV 157 (170)
T ss_dssp TTEEEEECCTTEE
T ss_pred CCCEEEeCCCCcE
Confidence 4568999999998
No 149
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=32.89 E-value=11 Score=26.16 Aligned_cols=20 Identities=25% Similarity=0.810 Sum_probs=14.5
Q ss_pred CceEEcCCCcc----CCCCCCCCC
Q psy14221 269 SGQCQCKENRA----GRTCNLALD 288 (546)
Q Consensus 269 ~~~C~C~~g~~----G~~C~~~~~ 288 (546)
+++|.|++||. |..|+..++
T Consensus 20 s~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 20 KRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp EEEEECCTTEEECTTSSCEEECSS
T ss_pred CEEeeCCCCCEECCCCCcccCCcc
Confidence 58999999996 556654433
No 150
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=32.25 E-value=25 Score=23.96 Aligned_cols=10 Identities=20% Similarity=0.674 Sum_probs=4.3
Q ss_pred CceEEcCCCc
Q psy14221 269 SGQCQCKENR 278 (546)
Q Consensus 269 ~~~C~C~~g~ 278 (546)
+++|.|++||
T Consensus 18 s~~C~C~~Gy 27 (51)
T 1kig_L 18 EVRCSCAHGY 27 (51)
T ss_dssp EECCCCCTTE
T ss_pred CeEEeCCCCc
Confidence 3444444444
No 151
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=31.94 E-value=13 Score=25.86 Aligned_cols=21 Identities=24% Similarity=0.472 Sum_probs=15.1
Q ss_pred CCCceEEcCCCcc----CCCCCCCC
Q psy14221 267 SISGQCQCKENRA----GRTCNLAL 287 (546)
Q Consensus 267 ~~~~~C~C~~g~~----G~~C~~~~ 287 (546)
.++|+|.|++||. |..|...+
T Consensus 19 ~Gsy~C~C~~Gy~L~~d~~~C~did 43 (55)
T 2jkh_L 19 QNSVVCSCARGYTLADNGKACIPTG 43 (55)
T ss_dssp TTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCeEEeCCCCCEECCCCCeeccCc
Confidence 5678999999996 45555433
No 152
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=28.56 E-value=27 Score=32.08 Aligned_cols=12 Identities=50% Similarity=1.489 Sum_probs=6.9
Q ss_pred CCCCCCCCCCCC
Q psy14221 20 GRQCDQCRPGSF 31 (546)
Q Consensus 20 G~~C~~C~~g~~ 31 (546)
|.-|..|+||++
T Consensus 43 ~~CC~~CppG~~ 54 (216)
T 3me4_A 43 GRCCSRCEPGKY 54 (216)
T ss_dssp TEEEECBCTTEE
T ss_pred CCCcCCCCCCce
Confidence 344566666665
No 153
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=20.50 E-value=33 Score=28.86 Aligned_cols=15 Identities=27% Similarity=0.720 Sum_probs=9.8
Q ss_pred CCCCcCCCCCccCCC
Q psy14221 107 GPLCDRCAYGYFGFP 121 (546)
Q Consensus 107 G~~C~~C~~g~~~~~ 121 (546)
...|+.|.+|.|...
T Consensus 36 ~t~C~pC~~gtys~~ 50 (134)
T 4fhq_A 36 GTVCEPCPPGTYIAH 50 (134)
T ss_dssp CCEEEECCTTEECCS
T ss_pred CCcccCCCCCCEecC
Confidence 445777888877554
No 154
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=20.18 E-value=47 Score=28.94 Aligned_cols=13 Identities=23% Similarity=0.575 Sum_probs=8.7
Q ss_pred CCCCCcCCCCCcC
Q psy14221 369 GLACDQCTEGHWG 381 (546)
Q Consensus 369 G~~C~~C~~g~~g 381 (546)
|..|..|++|++-
T Consensus 13 ~~~C~~CppG~~~ 25 (167)
T 1jma_B 13 SECCPKCSPGYRV 25 (167)
T ss_dssp TBCCBCBCTTEEE
T ss_pred CcCCCCCCCCCEe
Confidence 4567777777654
No 155
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=20.15 E-value=36 Score=29.44 Aligned_cols=29 Identities=24% Similarity=0.805 Sum_probs=17.6
Q ss_pred CcccCCcccCCC-----Cccc-CCCCeEeCCCCCc
Q psy14221 434 GCTECASCEQSG-----MVCS-EESGQCVCPPLTR 462 (546)
Q Consensus 434 ~C~~c~~C~~~~-----g~C~-~~~~~C~C~~g~~ 462 (546)
.|.+|..|+... ..|. ...-+|.|++||.
T Consensus 84 ~C~~C~~C~~~~g~~~~~~CT~t~dtvC~C~~G~f 118 (156)
T 3tje_F 84 KCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPNFF 118 (156)
T ss_dssp CCEECCCCCGGGTEEEEECCBTTBCCEEEECTTEE
T ss_pred cCcCCCCCCCCcceEEeccccCCCCCeeeCCCCCE
Confidence 466666673321 2455 2345799999986
Done!