Query psy14223
Match_columns 173
No_of_seqs 28 out of 30
Neff 3.1
Searched_HMMs 13730
Date Fri Aug 16 22:34:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14223.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14223hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k28a2 b.108.1.2 (A:362-584) 54.6 34 0.0024 24.6 15.0 108 56-163 81-188 (223)
2 d1k28a2 b.108.1.2 (A:362-584) 41.5 55 0.004 23.3 14.2 10 58-67 91-100 (223)
3 d1f1ja_ c.17.1.1 (A:) Caspase- 8.1 37 0.0027 24.7 -0.1 9 1-9 126-134 (245)
4 g1qtn.1 c.17.1.1 (A:,B:) Caspa 7.5 42 0.0031 24.2 0.0 9 1-9 135-143 (242)
5 d1m72a_ c.17.1.1 (A:) Caspase- 6.9 47 0.0034 24.4 0.0 9 1-9 136-144 (256)
6 g1nme.1 c.17.1.1 (A:,B:) Apopa 5.9 55 0.004 23.7 -0.1 9 1-9 132-140 (238)
7 g1pyo.1 c.17.1.1 (A:,B:) Caspa 4.9 69 0.005 23.4 -0.1 9 1-9 144-152 (257)
8 g1sc3.1 c.17.1.1 (A:,B:) Inter 4.3 84 0.0061 22.7 0.0 7 1-7 158-164 (261)
9 d1nw9b_ c.17.1.1 (B:) Caspase- 3.6 88 0.0064 22.4 -0.4 9 1-9 145-153 (277)
10 d1nzya_ c.14.1.3 (A:) 4-Chloro 2.2 4.2E+02 0.03 18.8 2.1 17 156-172 253-269 (269)
No 1
>d1k28a2 b.108.1.2 (A:362-584) Tail-associated lysozyme gp5, C-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=54.56 E-value=34 Score=24.57 Aligned_cols=108 Identities=18% Similarity=0.121 Sum_probs=51.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14223 56 GPGDKEKRGPGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEER 135 (173)
Q Consensus 56 ~PG~~~~ripgsqe~R~pgsq~~R~pgs~~~RiPgs~~~RiPgs~e~RipGsqd~R~PG~qd~Ripgs~n~Ripgsqe~R 135 (173)
+-+.....+-|.....+-|....-+-+...+.+-|...+.+-|...+.+-|.....+-|...+.+-+.....+-+.....
T Consensus 81 v~gd~~~~V~Gd~~~tV~G~~~~~v~g~~~~~V~Gn~~~~V~gd~~~~V~Gn~~~~V~gn~~~~V~g~~~~~v~g~~~~~ 160 (223)
T d1k28a2 81 TNADGNFLVAGDKKTNVGGSEIYYNMDNRLHQIDGSNTIFVRGDETKTVEGNGTILVKGNVTIIVEGNADITVKGDATTL 160 (223)
T ss_dssp CSSCCCCCCCSCCCCCCSSCCCCCCSSCCCCCCSSCCCCCCSSCCCCCCSSCCCCCCSSCCCCCCSSCCCCCCSSCCCCC
T ss_pred eccceeEEEcccEEEEEeccceeeeeeeeeeeecCCceEEeccCceEeeccceeEEEeecceEEEccceeEeecCceeEE
Confidence 33444444444444444444444444444444444444444444444444444444444444444444444444555555
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14223 136 GPGDKEERGPGDKEERGQGDKEKRGPGD 163 (173)
Q Consensus 136 iPg~qe~RiPg~qn~ri~~~q~~rip~~ 163 (173)
+-|.....+-|..+..+.+..++.+-+.
T Consensus 161 v~Gn~~~~v~G~~~~~v~g~~~~~v~G~ 188 (223)
T d1k28a2 161 VEGNQTNTVNGNLSWKVAGTVDWDVGGD 188 (223)
T ss_dssp CSSCCCCCCSSCCCCCCSSCCCCCCSSC
T ss_pred eccceEEEecCeEEEEEcCEEEEEECCE
Confidence 5555555555555555555544444443
No 2
>d1k28a2 b.108.1.2 (A:362-584) Tail-associated lysozyme gp5, C-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=41.53 E-value=55 Score=23.31 Aligned_cols=10 Identities=40% Similarity=0.611 Sum_probs=3.6
Q ss_pred CCCCCCCCCC
Q psy14223 58 GDKEKRGPGD 67 (173)
Q Consensus 58 G~~~~ripgs 67 (173)
|..++.+-|.
T Consensus 91 Gd~~~tV~G~ 100 (223)
T d1k28a2 91 GDKKTNVGGS 100 (223)
T ss_dssp SCCCCCCSSC
T ss_pred ccEEEEEecc
Confidence 3333333333
No 3
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.08 E-value=37 Score=24.65 Aligned_cols=9 Identities=56% Similarity=1.091 Sum_probs=6.9
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 126 iqaCrg~~~ 134 (245)
T d1f1ja_ 126 IQACRGTEL 134 (245)
T ss_dssp EESCCSSBC
T ss_pred hhhhcCccc
Confidence 589998653
No 4
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.51 E-value=42 Score=24.18 Aligned_cols=9 Identities=44% Similarity=1.036 Sum_probs=6.8
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 135 idaCr~~~~ 143 (242)
T g1qtn.1 135 IQACQGDNY 143 (242)
T ss_dssp EESCSSSBC
T ss_pred eecccCCcc
Confidence 589999643
No 5
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}
Probab=6.91 E-value=47 Score=24.39 Aligned_cols=9 Identities=56% Similarity=1.235 Sum_probs=6.7
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 136 lqACRg~~~ 144 (256)
T d1m72a_ 136 IQACQGDRL 144 (256)
T ss_dssp EESCSSSBC
T ss_pred EecCcCCcc
Confidence 589998653
No 6
>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.91 E-value=55 Score=23.72 Aligned_cols=9 Identities=56% Similarity=1.091 Sum_probs=6.5
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 132 ldaCRg~~~ 140 (238)
T g1nme.1 132 IQACRGTEL 140 (238)
T ss_dssp EESCSSSBC
T ss_pred eccccCccc
Confidence 589998543
No 7
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.93 E-value=69 Score=23.35 Aligned_cols=9 Identities=56% Similarity=1.261 Sum_probs=6.5
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 144 ldaCR~~~~ 152 (257)
T g1pyo.1 144 IQACRGDET 152 (257)
T ss_dssp EESCSSSBC
T ss_pred eehhhCCcc
Confidence 589997643
No 8
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.35 E-value=84 Score=22.70 Aligned_cols=7 Identities=57% Similarity=1.051 Sum_probs=5.5
Q ss_pred Ccccccc
Q psy14223 1 MQACRGE 7 (173)
Q Consensus 1 ~~~~~~~ 7 (173)
+|||||.
T Consensus 158 ldaCR~~ 164 (261)
T g1sc3.1 158 IQAARGD 164 (261)
T ss_dssp EECCCSS
T ss_pred chhhcCC
Confidence 4899984
No 9
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.65 E-value=88 Score=22.41 Aligned_cols=9 Identities=56% Similarity=1.088 Sum_probs=4.1
Q ss_pred Ccccccccc
Q psy14223 1 MQACRGERA 9 (173)
Q Consensus 1 ~~~~~~~~~ 9 (173)
+|||||...
T Consensus 145 idaCr~~~~ 153 (277)
T d1nw9b_ 145 IQACGGEQK 153 (277)
T ss_dssp EEEEC----
T ss_pred EecccCCcc
Confidence 589998643
No 10
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}
Probab=2.23 E-value=4.2e+02 Score=18.76 Aligned_cols=17 Identities=12% Similarity=0.278 Sum_probs=11.2
Q ss_pred CCCCCCCCccccCCCCC
Q psy14223 156 KEKRGPGDKEERAPGGL 172 (173)
Q Consensus 156 q~~rip~~k~~~~~~~~ 172 (173)
-+.|=|.+....+|+|+
T Consensus 253 lekrkp~~~~~~~~~~~ 269 (269)
T d1nzya_ 253 LDGHRADRPQVELPAGV 269 (269)
T ss_dssp HTTCCTTCCSSCCCCCC
T ss_pred HCCCCCCcCCCCCCCCC
Confidence 34566677777777775
Done!