Your job contains 1 sequence.
>psy14223
MQACRGERASDKEERGPGDKEERGPGDKKARGPGDKEERGPGDKEERGPGDEEERGPGDK
EKRGPGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG
PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGLV
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14223
(173 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1560136 - symbol:Rpgr "retinitis pigmentosa GTPase re... 185 1.9e-16 2
UNIPROTKB|A2VD00 - symbol:eif3a "Eukaryotic translation i... 178 9.9e-15 2
DICTYBASE|DDB_G0268004 - symbol:snrp70 "U1 small nuclear ... 169 1.2e-13 2
UNIPROTKB|A4II09 - symbol:eif3a "Eukaryotic translation i... 160 1.8e-12 2
UNIPROTKB|Q02388 - symbol:COL7A1 "Collagen alpha-1(VII) c... 162 2.9e-12 2
FB|FBgn0003861 - symbol:trp "transient receptor potential... 173 1.1e-11 1
POMBASE|SPAC19G12.10c - symbol:cpy1 "vacuolar carboxypept... 171 1.3e-11 1
GENEDB_PFALCIPARUM|PF10_0374 - symbol:PF10_0374 "Pf 11-1 ... 176 3.2e-11 2
UNIPROTKB|Q8I6U6 - symbol:PF10_0374 "Pf11-1 protein" spec... 176 3.2e-11 2
GENEDB_PFALCIPARUM|PF07_0100 - symbol:PF07_0100 "hypothet... 167 3.6e-11 1
UNIPROTKB|Q8IBL6 - symbol:PF07_0100 "Putative uncharacter... 167 3.6e-11 1
UNIPROTKB|F1P5D3 - symbol:COL3A1 "Collagen alpha-1(III) c... 127 4.5e-11 2
UNIPROTKB|P15988 - symbol:COL6A2 "Collagen alpha-2(VI) ch... 136 7.0e-11 2
UNIPROTKB|F1MH65 - symbol:BFSP1 "Filensin" species:9913 "... 152 1.0e-10 2
UNIPROTKB|Q81UJ7 - symbol:BAS0828 "LPXTG-motif cell wall ... 162 1.1e-10 1
TIGR_CMR|BA_0871 - symbol:BA_0871 "LPXTG-motif cell wall ... 162 1.1e-10 1
UNIPROTKB|Q06002 - symbol:BFSP1 "Filensin" species:9913 "... 148 1.7e-10 2
ZFIN|ZDB-GENE-050626-88 - symbol:rbmx2 "RNA binding motif... 136 2.1e-10 2
UNIPROTKB|F1SKM1 - symbol:COL7A1 "Uncharacterized protein... 145 2.7e-10 2
UNIPROTKB|E1BI98 - symbol:COL6A1 "Uncharacterized protein... 139 2.9e-10 2
UNIPROTKB|P12109 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 138 3.7e-10 2
RGD|1565398 - symbol:Col6a1 "collagen, type VI, alpha 1" ... 136 5.9e-10 2
UNIPROTKB|Q5TAT6 - symbol:COL13A1 "Collagen alpha-1(XIII)... 132 6.5e-10 2
UNIPROTKB|E1B7H2 - symbol:COL7A1 "Uncharacterized protein... 148 7.0e-10 2
MGI|MGI:88459 - symbol:Col6a1 "collagen, type VI, alpha 1... 135 7.6e-10 2
UNIPROTKB|Q1JQB0 - symbol:COL6A2 "Collagen, type VI, alph... 131 9.4e-10 2
ZFIN|ZDB-GENE-070822-11 - symbol:zgc:171310 "zgc:171310" ... 146 1.1e-09 1
UNIPROTKB|F1S9I0 - symbol:MIA3 "Uncharacterized protein" ... 147 1.1e-09 2
ZFIN|ZDB-GENE-070501-6 - symbol:col6a1 "collagen, type VI... 133 1.2e-09 2
RGD|1595704 - symbol:Col13a1 "collagen, type XIII, alpha ... 120 1.2e-09 2
UNIPROTKB|F1MKG2 - symbol:COL6A2 "Uncharacterized protein... 131 1.2e-09 2
UNIPROTKB|P82970 - symbol:HMGN5 "High mobility group nucl... 120 1.3e-09 2
UNIPROTKB|F1SNP1 - symbol:COL4A4 "Uncharacterized protein... 120 2.0e-09 2
UNIPROTKB|A7YY40 - symbol:COL13A1 "Uncharacterized protei... 121 2.0e-09 2
RGD|1311417 - symbol:Col7a1 "collagen, type VII, alpha 1"... 132 2.3e-09 2
UNIPROTKB|P20785 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 133 2.5e-09 2
UNIPROTKB|F1NFE0 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 133 2.5e-09 2
UNIPROTKB|F1NI73 - symbol:COL3A1 "Collagen alpha-1(III) c... 127 2.5e-09 2
UNIPROTKB|P12105 - symbol:COL3A1 "Collagen alpha-1(III) c... 127 2.5e-09 2
WB|WBGene00018119 - symbol:F36H12.3 species:6239 "Caenorh... 117 2.6e-09 2
GENEDB_PFALCIPARUM|PFE0495w - symbol:PFE0495w "hypothetic... 148 2.7e-09 1
UNIPROTKB|Q8I404 - symbol:PFE0495w "Putative uncharacteri... 148 2.7e-09 1
UNIPROTKB|F1MXS8 - symbol:COL3A1 "Collagen alpha-1(III) c... 131 2.8e-09 2
TAIR|locus:2197550 - symbol:AGO3 "ARGONAUTE 3" species:37... 134 2.8e-09 2
RGD|70922 - symbol:Col5a3 "collagen, type V, alpha 3" spe... 131 3.2e-09 2
UNIPROTKB|E7ENY8 - symbol:COL3A1 "Collagen alpha-1(III) c... 128 3.4e-09 2
UNIPROTKB|B3LY22 - symbol:eIF3-S10 "Eukaryotic translatio... 141 3.4e-09 2
UNIPROTKB|F1RYI8 - symbol:COL3A1 "Uncharacterized protein... 130 3.5e-09 2
UNIPROTKB|E2RRS5 - symbol:RBM12B "Uncharacterized protein... 148 3.6e-09 1
UNIPROTKB|F1NI72 - symbol:COL3A1 "Collagen alpha-1(III) c... 127 3.7e-09 2
MGI|MGI:88453 - symbol:Col3a1 "collagen, type III, alpha ... 129 4.5e-09 2
UNIPROTKB|J9P0L0 - symbol:COL3A1 "Uncharacterized protein... 129 4.5e-09 2
UNIPROTKB|F1PG69 - symbol:COL3A1 "Uncharacterized protein... 129 4.5e-09 2
UNIPROTKB|I3LS72 - symbol:COL6A1 "Uncharacterized protein... 124 4.6e-09 2
UNIPROTKB|F1PIP7 - symbol:COL7A1 "Uncharacterized protein... 147 4.7e-09 2
UNIPROTKB|F1MAL9 - symbol:Col1a1 "Collagen alpha-1(I) cha... 122 4.9e-09 2
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 134 5.2e-09 2
UNIPROTKB|P04258 - symbol:COL3A1 "Collagen alpha-1(III) c... 131 5.4e-09 2
UNIPROTKB|F1MTS7 - symbol:CNGB1 "Cyclic nucleotide-gated ... 148 5.4e-09 1
UNIPROTKB|Q28181 - symbol:CNGB1 "Cyclic nucleotide-gated ... 148 5.5e-09 1
UNIPROTKB|E2R2K8 - symbol:PPP1R10 "Uncharacterized protei... 132 6.7e-09 2
MGI|MGI:88462 - symbol:Col7a1 "collagen, type VII, alpha ... 138 7.6e-09 2
UNIPROTKB|F1SN69 - symbol:F1SN69 "Uncharacterized protein... 130 7.6e-09 2
UNIPROTKB|F1NBA6 - symbol:F1NBA6 "Uncharacterized protein... 137 7.7e-09 2
MGI|MGI:1277201 - symbol:Col13a1 "collagen, type XIII, al... 120 8.2e-09 2
UNIPROTKB|Q5TM61 - symbol:PPP1R10 "Serine/threonine-prote... 131 8.5e-09 2
UNIPROTKB|E1BPV7 - symbol:100851509 "Uncharacterized prot... 134 1.0e-08 2
UNIPROTKB|F1SF83 - symbol:COL28A1 "Uncharacterized protei... 134 1.1e-08 2
UNIPROTKB|P02461 - symbol:COL3A1 "Collagen alpha-1(III) c... 125 1.2e-08 2
RGD|735115 - symbol:Col27a1 "collagen, type XXVII, alpha ... 136 1.2e-08 2
UNIPROTKB|Q80ZF0 - symbol:Col27a1 "Collagen alpha-1(XXVII... 136 1.2e-08 2
ZFIN|ZDB-GENE-030131-9003 - symbol:scaf4a "SR-related CTD... 134 1.2e-08 2
UNIPROTKB|Q96QC0 - symbol:PPP1R10 "Serine/threonine-prote... 129 1.4e-08 2
UNIPROTKB|P12110 - symbol:COL6A2 "Collagen alpha-2(VI) ch... 125 1.7e-08 2
ZFIN|ZDB-GENE-080721-25 - symbol:zgc:194937 "zgc:194937" ... 112 1.8e-08 2
UNIPROTKB|F1NQ20 - symbol:COL9A1 "Collagen alpha-1(IX) ch... 122 1.8e-08 2
WB|WBGene00044201 - symbol:H39E23.3 species:6239 "Caenorh... 140 1.8e-08 1
UNIPROTKB|F1NDC7 - symbol:MARCO "Uncharacterized protein"... 120 2.0e-08 2
UNIPROTKB|J9NUC9 - symbol:HMGN5 "Uncharacterized protein"... 109 2.4e-08 2
UNIPROTKB|F1NHH4 - symbol:F1NHH4 "Uncharacterized protein... 124 2.4e-08 2
MGI|MGI:1924268 - symbol:Col25a1 "collagen, type XXV, alp... 119 2.5e-08 2
UNIPROTKB|E7ENL6 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 130 2.6e-08 2
UNIPROTKB|E9PCV6 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 130 2.6e-08 2
UNIPROTKB|F1NWY2 - symbol:F1NWY2 "Uncharacterized protein... 119 2.8e-08 2
UNIPROTKB|F1SUE9 - symbol:COL13A1 "Uncharacterized protei... 118 2.9e-08 2
UNIPROTKB|P12111 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 130 2.9e-08 2
ZFIN|ZDB-GENE-041105-6 - symbol:col5a1 "procollagen, type... 119 3.0e-08 2
ZFIN|ZDB-GENE-070705-84 - symbol:col28a1 "collagen, type ... 133 3.0e-08 2
UNIPROTKB|F1MTP1 - symbol:F1MTP1 "Uncharacterized protein... 132 3.0e-08 2
WB|WBGene00020550 - symbol:T17H7.1 species:6239 "Caenorha... 137 3.3e-08 1
ZFIN|ZDB-GENE-060312-44 - symbol:neflb "neurofilament, li... 125 3.4e-08 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 126 3.8e-08 2
UNIPROTKB|Q9BXS0 - symbol:COL25A1 "Collagen alpha-1(XXV) ... 117 3.9e-08 2
UNIPROTKB|B4GDX4 - symbol:eIF3-S10 "Eukaryotic translatio... 139 4.1e-08 1
UNIPROTKB|F1NR04 - symbol:COL5A1 "Uncharacterized protein... 108 4.1e-08 2
TAIR|locus:2183399 - symbol:GRP16 "glycine-rich protein 1... 128 4.2e-08 1
UNIPROTKB|Q767K9 - symbol:PPP1R10 "Serine/threonine-prote... 124 4.4e-08 2
UNIPROTKB|Q14050 - symbol:COL9A3 "Collagen alpha-3(IX) ch... 112 4.5e-08 2
ZFIN|ZDB-GENE-050522-205 - symbol:nefma "neurofilament, m... 126 4.8e-08 2
RGD|71029 - symbol:Col3a1 "collagen, type III, alpha 1" s... 119 4.9e-08 2
WARNING: Descriptions of 503 database sequences were not reported due to the
limiting value of parameter V = 100.
>RGD|1560136 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10116 "Rattus norvegicus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005929
"cilium" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0042384 "cilium assembly" evidence=ISO] [GO:0042462 "eye
photoreceptor cell development" evidence=ISO] RGD:1560136
EMBL:AY855168 IPI:IPI00361392 UniGene:Rn.103641 UniGene:Rn.215816
UCSC:RGD:1560136 Genevestigator:Q56PB7 Uniprot:Q56PB7
Length = 572
Score = 185 (70.2 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 45/115 (39%), Positives = 63/115 (54%)
Query: 66 GDKEERGPGDKEKRGP--GDKEERGPGDKE----ERGPGDREKRGP--GDKEERGPGDKE 117
GD+EE G G++E G G EE G G++E E G G+ E G G EE G G++E
Sbjct: 308 GDREEEGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEGGGEEE 367
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGP--GDKEERGQGDKEKRGPGDKEERAPG 170
G + E G+ EE G G++E G G+ EE G+G++E +G G+ EE G
Sbjct: 368 GEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGQGEGEGEEEGEG 422
Score = 181 (68.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 43/109 (39%), Positives = 62/109 (56%)
Query: 66 GDKEERGPGDKEKRGP--GDKEERGPGDKE----ERGPGDREKRGP--GDKEERGPGDKE 117
G EE G G++E G G EE G G++E E G G+ E G G+ EE G G++E
Sbjct: 326 GGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEGGGEEEGEGEEEGEGEEEGEGEEE 385
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G + E G+ EE G G++E +G G+ EE G+G++EK G++EE
Sbjct: 386 GEGEEEGEGEEEGEGEEEGEGEEEGQGEGEGEEEGEGEEEKE-KGEEEE 433
Score = 166 (63.5 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 42/109 (38%), Positives = 63/109 (57%)
Query: 66 GDKEERGPGDKEKRGP--GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
G+ EE G G++E G G+ EE G G++E G + E G+ EE G G++E G G+
Sbjct: 350 GEGEEEGGGEEEGGGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEE--GEGE 407
Query: 124 KEKRGPGDKEERGPGDKE-ERGPGDK-EERGQGDKE----KRGPGDKEE 166
+E +G G+ EE G G++E E+G ++ E+ G D E K G G +EE
Sbjct: 408 EEGQGEGEGEEEGEGEEEKEKGEEEEVEDDGADDGEELEDKEGEGTEEE 456
Score = 162 (62.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 43/117 (36%), Positives = 62/117 (52%)
Query: 66 GDKEERGPGDKEKRGP--GDKEERGPG----DKEERGPGDREKRGP--GDKEERGPGDKE 117
G+ EE G G++E+ G G + E G G D+EE G G+ E G G EE G G++E
Sbjct: 278 GEGEEEGGGEEEEEGEEEGGEGEEGEGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEE 337
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGP--GDKEERGQGDKEKRGP--GDKEERAPG 170
G + + G+ EE G G++E G G+ EE G+G++E G G+ EE G
Sbjct: 338 WEGEEEGQGEEEGEGEEEGGGEEEGGGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEG 394
Score = 161 (61.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 46/122 (37%), Positives = 67/122 (54%)
Query: 66 GDKEERGPGDK---EKRGPGDKEERGP--GDKEERGPGDREKRGPGDKE---ERGPGDK- 116
G++EE G G++ E+ G G++EE G G +EE G G+ E G ++E E G G++
Sbjct: 243 GEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEEGGGEEEEEGEEEGGEGEEG 302
Query: 117 EKRGPGDKEKRGPGDKEERGP--GDKEERGPGDKE----ERGQGDKEKRGP--GDKEERA 168
E GD+E+ G G++E G G EE G G++E E GQG++E G G EE
Sbjct: 303 EGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEG 362
Query: 169 PG 170
G
Sbjct: 363 GG 364
Score = 158 (60.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 68 KEERGPGDK-EKRGPGDKEERGPGDKEERGP--GDREKRGPGDKEERGP--GDKEKRGPG 122
+EE G G++ E GD+EE G G++E G G E+ G G++E G G E+ G G
Sbjct: 293 EEEGGEGEEGEGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEG 352
Query: 123 DKEKRGP--GDKEERGPGDKEERGP--GDKEERGQGDKEKRGP--GDKEERAPG 170
++E G G EE G G++E G G+ EE G+G++E G G+ EE G
Sbjct: 353 EEEGGGEEEGGGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEG 406
Score = 157 (60.3 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 42/113 (37%), Positives = 64/113 (56%)
Query: 69 EERGPGDKE--KRGPGDKEERGPGDK---EERGPGDREKRGP--GDKEERGPGDKEKRGP 121
EE G G++E + G++EE G G++ EE G G+ E+ G G +EE G G++E G
Sbjct: 228 EEEGEGEEEGGEEEEGEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEEGGGE 287
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE---ERAPGG 171
++E G + E G G++E GD+EE G G++E G G++E E GG
Sbjct: 288 EEEEGEEEGGEGEEGEGEEE----GDREEEGGGEEE--GGGEEEGGGEEEGGG 334
Score = 154 (59.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 69 EERGPGDKEKRGP--GDKEERGPGDKEERGPGDREKRGP--GDKEERGPG----DKEKRG 120
EE G G++E+ G G +EE G G EE G G+ E+ G G + E G G D+E+ G
Sbjct: 257 EEEGGGEEEEEGEEEGGEEEEGEG--EEEGGGEEEEEGEEEGGEGEEGEGEEEGDREEEG 314
Query: 121 PGDKEKRGP--GDKEERGPGDKEERGP--GDKEERGQGDKEKRGP--GDKEERAPG 170
G++E G G EE G G++E G G EE G+G++E G G EE G
Sbjct: 315 GGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEGGGEEEGEG 370
Score = 150 (57.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKE--KRGPGDKE 125
+EE G +EK G G +E+ G D++ER +RE+ + EE G G++E + G++E
Sbjct: 190 REEEG-NRQEKEG-GREEKEGQEDEKEREELEREEEIE-EGEEEGEGEEEGGEEEEGEEE 246
Query: 126 KRGPGDK---EERGPGDKEERGP--GDKEERGQGDKEKRGPGDKEERAPGG 171
+ G G++ EE G G++EE G G +EE G+G++E G ++E GG
Sbjct: 247 EEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEEGGGEEEEEGEEEGG 297
Score = 150 (57.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 43/125 (34%), Positives = 70/125 (56%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEER-------GPGDRE--KRGPGDKEERGPGDK 116
G+++E+ G +EK G D++ER ++EE G G+ E + G++EE G G++
Sbjct: 194 GNRQEKEGGREEKEGQEDEKEREELEREEEIEEGEEEGEGEEEGGEEEEGEEEEEGGGEE 253
Query: 117 ---EKRGPGDKEKRGP--GDKEERGPGDKEERGPGDKEERGQ--GDKEKRGPGDKE---E 166
E+ G G++E+ G G +EE G G EE G G++EE G+ G + + G G++E E
Sbjct: 254 AGGEEEGGGEEEEEGEEEGGEEEEGEG--EEEGGGEEEEEGEEEGGEGEEGEGEEEGDRE 311
Query: 167 RAPGG 171
GG
Sbjct: 312 EEGGG 316
Score = 140 (54.3 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEER-GPGDKEKRGPGD 123
G +E G +++ R G+++E+ G +E+ G D ++R ++EE G++E G +
Sbjct: 177 GQEEGEGTSEEQSREEEGNRQEKEGGREEKEGQEDEKEREELEREEEIEEGEEEGEGEEE 236
Query: 124 KEKRGPGDKEERGPGDK---EERGPGDKEERGQ--GDKEKRGPGDKE 165
+ G++EE G G++ EE G G++EE G+ G +E+ G G++E
Sbjct: 237 GGEEEEGEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEE 283
Score = 139 (54.0 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 69 EERGP-GDKEKRGPGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKR-GPGDKE 125
EE+G G +E G +++ R G+++E+ G EK G D++ER ++E+ G++E
Sbjct: 171 EEKGEEGQEEGEGTSEEQSREEEGNRQEKEGGREEKEGQEDEKEREELEREEEIEEGEEE 230
Query: 126 KRGPGDKEERGPGDKEERGPGDK---EERGQGDKEKRGP--GDKEERAPG 170
G + E G++EE G G++ EE G G++E+ G G +EE G
Sbjct: 231 GEGEEEGGEEEEGEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEG 280
Score = 136 (52.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 33/109 (30%), Positives = 63/109 (57%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDK-EERGPGDREKRGPGDKEERGPGDKEKRGP-GD 123
G+K ER G++E+R + EER GD+ E+ ++E+ ++EE + E++G G
Sbjct: 120 GEKMERNEGNREERNQ-EMEEREAGDEGSEKEDEEKEEEEEEEEEEEEEENPEEKGEEGQ 178
Query: 124 KEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+E G +++ R G+++E+ G +E+ GQ D+++R ++EE G
Sbjct: 179 EEGEGTSEEQSREEEGNRQEKEGGREEKEGQEDEKEREELEREEEIEEG 227
Score = 130 (50.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 38/114 (33%), Positives = 62/114 (54%)
Query: 67 DKEERGPGDK-EKRGPG-DKEERGPGDKEERGPGDREKRGPGD----KEERGPGDKEKRG 120
D E +G + EK G G +K ER G++EER + E+R GD KE+ ++E+
Sbjct: 103 DMEGKGEDEGWEKGGEGGEKMERNEGNREERNQ-EMEEREAGDEGSEKEDEEKEEEEEEE 161
Query: 121 PGDKEKRGPGDK----EERGPGDKEERG---PGDKEERGQGDKEKRGPGDKEER 167
++E+ P +K +E G G EE+ G+++E+ G +EK G D++ER
Sbjct: 162 EEEEEEENPEEKGEEGQEEGEGTSEEQSREEEGNRQEKEGGREEKEGQEDEKER 215
Score = 124 (48.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDKEKRGPGDKE 125
+KE+ ++E+ ++EE P +K E G E G +++ R G+++++ G +E
Sbjct: 148 EKEDEEKEEEEEEEEEEEEEENPEEKGEEG--QEEGEGTSEEQSREEEGNRQEKEGGREE 205
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
K G D++ER ++EE + EE G+G++E + EE GG
Sbjct: 206 KEGQEDEKEREELEREEEIE-EGEEEGEGEEEGGEEEEGEEEEEGG 250
Score = 118 (46.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 75 DKEKRGPGDKEERGP--GDKEERGPGDREKRGPGDKEERGPGDK-EKRGPGDKEKRGPGD 131
D E +G + E+G G+K ER G+RE+R + EER GD+ ++ +KE+ +
Sbjct: 103 DMEGKGEDEGWEKGGEGGEKMERNEGNREERNQ-EMEEREAGDEGSEKEDEEKEEEEEEE 161
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRG---PGDKEERAPG 170
+EE + EE+G +EE G+G E++ G+++E+ G
Sbjct: 162 EEEEEEENPEEKGEEGQEE-GEGTSEEQSREEEGNRQEKEGG 202
Score = 106 (42.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 75 DKEKRGPGDKEERGPGDKEERGPGDR-EKRGPG-DKEERGPGDKEKRGPGDKEKRGPGDK 132
+K++R G ++ D E +G + EK G G +K ER G++E+R + E+R GD+
Sbjct: 87 EKQERRKGKGKQSHILDMEGKGEDEGWEKGGEGGEKMERNEGNREERNQ-EMEEREAGDE 145
Query: 133 -EERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
E+ +KEE ++EE + + E++G +EE
Sbjct: 146 GSEKEDEEKEEEEEEEEEEEEEENPEEKGEEGQEE 180
Score = 104 (41.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDK-EKRGPG-D 123
G + ERG +EK G ++ + +K+ER G ++ D E +G + EK G G +
Sbjct: 63 GSEGERGQ-IREKGSLGVQQWQRVQEKQERRKGKGKQSHILDMEGKGEDEGWEKGGEGGE 121
Query: 124 KEKRGPGDKEERGPGDKEERGPGDK-EERGQGDKEKRGPGDKEE 166
K +R G++EER + EER GD+ E+ +KE+ ++EE
Sbjct: 122 KMERNEGNREERNQ-EMEEREAGDEGSEKEDEEKEEEEEEEEEE 164
Score = 55 (24.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARG 32
GE D+EE G G EE G G+++ G
Sbjct: 304 GEEEGDREEEGGG--EEEGGGEEEGGG 328
Score = 44 (20.5 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 5 RGERASDKEERGPGDKEER 23
+G +K ER G++EER
Sbjct: 115 KGGEGGEKMERNEGNREER 133
Score = 42 (19.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 7 ERASDKEERGPGDKEERGPGDKKAR 31
E +++E+ G +E+ G D+K R
Sbjct: 191 EEEGNRQEKEGGREEKEGQEDEKER 215
Score = 39 (18.8 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 5 RGERASDKEERGPGDKEERGPGDKK 29
R ER + EER GD+ ++K
Sbjct: 130 REERNQEMEEREAGDEGSEKEDEEK 154
Score = 39 (18.8 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ S+KE+ ++EE +++ P
Sbjct: 143 GDEGSEKEDEEKEEEEEEEEEEEEEENP 170
Score = 35 (17.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 6 GERASDKEERGP--GDKEERGPGDKKAR 31
G+ + E+G G+K ER G+++ R
Sbjct: 106 GKGEDEGWEKGGEGGEKMERNEGNREER 133
Score = 33 (16.7 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARG 32
+R +K+ER G ++ D + +G
Sbjct: 83 QRVQEKQERRKGKGKQSHILDMEGKG 108
>UNIPROTKB|A2VD00 [details] [associations]
symbol:eif3a "Eukaryotic translation initiation factor 3
subunit A" species:8355 "Xenopus laevis" [GO:0001732 "formation of
translation initiation complex" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0003743
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 HOVERGEN:HBG006128
GO:GO:0001732 EMBL:BC129055 RefSeq:NP_001085285.1 UniGene:Xl.57279
PRIDE:A2VD00 GeneID:443632 KEGG:xla:443632 Uniprot:A2VD00
Length = 1424
Score = 178 (67.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 63/128 (49%), Positives = 72/128 (56%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G E+RGP G E RGP G E+RGP G E+RGP G E RGP G E+RGP
Sbjct: 1002 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1061
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGPG-D-KEERGP--GDKEERG--QGDKEKRGP-- 161
G E RGP G E RGP G E+RGP D E+RGP G E+RG +G E RGP
Sbjct: 1062 GLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1121
Query: 162 GDKEERAP 169
G E+R P
Sbjct: 1122 GFDEDRGP 1129
Score = 174 (66.3 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 58/128 (45%), Positives = 75/128 (58%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGPG-D-REKRGP--GDKEERGP-- 113
G E+RGP G E RGP G E+RGP G E+RGP D E RGP G E+RGP
Sbjct: 1052 GLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRR 1111
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP-- 161
G E RGP G E RGP G ++RGP G ++RGP G +++RG +G ++ RGP
Sbjct: 1112 GFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRRGFEDDRGPRR 1171
Query: 162 GDKEERAP 169
G +++R P
Sbjct: 1172 GFEDDRGP 1179
Score = 167 (63.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 56/128 (43%), Positives = 75/128 (58%)
Query: 66 GDKEERGP--GDKEKRGPG-D-KEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G E+RGP G E RGP D E+RGP G E+RGP G E RGP G E+RGP
Sbjct: 1072 GFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1131
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP-- 161
G + RGP G + RGP G +++RGP G +++RGP G +++RG +G E R P
Sbjct: 1132 GFDDDRGPRRGFDDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRR 1191
Query: 162 GDKEERAP 169
G +++R P
Sbjct: 1192 GFEDDRGP 1199
Score = 161 (61.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 55/127 (43%), Positives = 77/127 (60%)
Query: 69 EERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP--GDK 116
E+RGP G E RGP G E+RGP G E+RGP G + RGP G ++RGP G +
Sbjct: 1095 EDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFE 1154
Query: 117 EKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QG-DKEK---RGPG 162
+ RGP G ++ RGP G +++RGP G E+R P G +++RG +G D+E+ RG G
Sbjct: 1155 DDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGPRRGMDEERVSWRG-G 1213
Query: 163 DKEERAP 169
+E+R P
Sbjct: 1214 AEEDRGP 1220
Score = 157 (60.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 56/118 (47%), Positives = 67/118 (56%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G +E GP G ++ +GP G E+RGP G E+RGP G E RGP G E+RGP
Sbjct: 982 GFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1041
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG-QGD-KEKRGP 161
G E RGP G E RGP G E+RGP G E+RGP G E+RG + D E RGP
Sbjct: 1042 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGP 1099
Score = 157 (60.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 56/125 (44%), Positives = 70/125 (56%)
Query: 69 EERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP--GDK 116
++RGP +E GP G +E GP G ++++GP G E RGP G E+RGP G
Sbjct: 965 DDRGPKRSVEEDGGPRRGFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLD 1024
Query: 117 EKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDK 164
E RGP G E RGP G E+RGP G E+RGP G E+RG +G E RGP G
Sbjct: 1025 EDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFD 1084
Query: 165 EERAP 169
E+R P
Sbjct: 1085 EDRGP 1089
Score = 148 (57.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 48/109 (44%), Positives = 70/109 (64%)
Query: 74 GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP--G-DKEK---R 119
G ++ RGP G +++RGP G +++RGP G E R P G +++RGP G D+E+ R
Sbjct: 1152 GFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGPRRGMDEERVSWR 1211
Query: 120 GPGDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRG 160
G G +E RGP G +E+RGP G +E+RGP G +E+RG +G +E RG
Sbjct: 1212 G-GAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRG 1259
Score = 147 (56.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 47/105 (44%), Positives = 66/105 (62%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGPGDREKRGPGDKEE---RGPGDK 116
G +++RGP G ++ RGP G E+R P G +++RGP +RG D+E RG G +
Sbjct: 1162 GFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGP----RRGM-DEERVSWRG-GAE 1215
Query: 117 EKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERGQ 153
E RGP G +E RGP G +E+RGP G +E+RGP G +E+RGQ
Sbjct: 1216 EDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGQ 1260
Score = 133 (51.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 50/120 (41%), Positives = 64/120 (53%)
Query: 67 DKEE--RGPGDKEKRGPG-DKEERGPGDKEERGPGDREKRGPGDKEERGP--GDKEKRGP 121
D+E+ RG GD+E+ ++RGP E G R RG D E GP G ++ +GP
Sbjct: 944 DEEQVARGDGDEERAASWRGTDDRGPKRSVEEDGGPR--RGFND--EPGPRRGFEDDQGP 999
Query: 122 --GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDKEERAP 169
G E RGP G E+RGP G E+RGP G E+RG +G E RGP G E+R P
Sbjct: 1000 RRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGP 1059
Score = 127 (49.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 48/124 (38%), Positives = 67/124 (54%)
Query: 66 GDKEERGP--G-DKEK---RGPGDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP 113
G +++RGP G D+E+ RG G +E+RGP G +E+RGP G E RGP G +E+RGP
Sbjct: 1192 GFEDDRGPRRGMDEERVSWRG-GAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGP 1250
Query: 114 --GDKEKRG-----PGDKEKRGPGDKEERGPGDKEERGPG-DKEERGQGDKEKRGP-GDK 164
G +E RG P + G ER ++ GP D + + D KRG G+K
Sbjct: 1251 RRGAEEDRGQTPWKPVVTSRPASGGWREREKAREDSWGPSHDSKPPEERDWSKRGEDGEK 1310
Query: 165 E-ER 167
+ ER
Sbjct: 1311 DSER 1314
Score = 109 (43.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 40/116 (34%), Positives = 56/116 (48%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRG-----PGDKEERG 112
G +E+RGP G +E RGP G +E+RGP G +E+RGP G E RG P
Sbjct: 1213 GAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGQTPWKPVVTSRPA 1272
Query: 113 PGDKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERA 168
G +R ++ GP + + P EER + E G+ D E+ +EE A
Sbjct: 1273 SGGWREREKAREDSWGPSH-DSKPP---EERDWSKRGEDGEKDSERDRRPVREESA 1324
Score = 107 (42.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 66 GDKEERG--PG---DKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
GD+EE G G D+ K+ P +++ R G ++ + D ++ G D R ++ RG
Sbjct: 893 GDREESGWRRGADPDERKQAPPERDWRS-GGQDSKPVKDEDREGDEDSVLRKDEEQVARG 951
Query: 121 PGDKEKRGPG-DKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDKEERAP 169
GD+E+ ++RGP +E+ GP G +E G +G ++ +GP G E+R P
Sbjct: 952 DGDEERAASWRGTDDRGPKRSVEEDGGPRRGFNDEPGPRRGFEDDQGPRRGLDEDRGP 1009
Score = 59 (25.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1097 RGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGP 1129
Score = 59 (25.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1087 RGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGP 1119
Score = 58 (25.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1057 RGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGP 1089
Score = 57 (25.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1047 RGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGP 1079
Score = 57 (25.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G RGP
Sbjct: 1107 RGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGP 1139
Score = 57 (25.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R +++RGP G +++RGP G + RGP
Sbjct: 1147 RGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGP 1179
Score = 56 (24.8 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1027 RGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGP 1059
Score = 56 (24.8 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1017 RGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGP 1049
Score = 56 (24.8 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1007 RGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGP 1039
Score = 56 (24.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G E+RGP G + RGP
Sbjct: 1037 RGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGP 1069
Score = 54 (24.1 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G ++RGP G RGP
Sbjct: 1117 RGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGP 1149
Score = 53 (23.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGPG-D-KKARGP 33
RG R E+RGP G E+RGP D + RGP
Sbjct: 1067 RGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGP 1099
Score = 53 (23.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGPG-D-KEERGP--GDKKARGP 33
RG R E+RGP D E+RGP G + RGP
Sbjct: 1077 RGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGP 1109
Score = 50 (22.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R +++RGP G E+R P G + RGP
Sbjct: 1167 RGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGP 1199
Score = 45 (20.9 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG + S +E+ GP G +E GP G + +GP
Sbjct: 967 RGPKRSVEEDGGPRRGFNDEPGPRRGFEDDQGP 999
Score = 43 (20.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 7 ERASDKEERGPGD--KEERGP---GDKKARG 32
E+ D+E RGP D +++ P GD++ G
Sbjct: 869 EKKRDEERRGPDDSFRKQDTPSRWGDREESG 899
Score = 37 (18.1 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 8 RASDKEERGPG-DKEERGPGD 27
R + EER D+E RGP D
Sbjct: 861 RELEIEEREKKRDEERRGPDD 881
>DICTYBASE|DDB_G0268004 [details] [associations]
symbol:snrp70 "U1 small nuclear ribonucleoprotein 70
kDa protein" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0005685
"U1 snRNP" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0268004 GenomeReviews:CM000150_GR
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AAFI02000003 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724
HSSP:Q14103 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220
RefSeq:XP_647483.1 ProteinModelPortal:Q55FQ0 STRING:Q55FQ0
EnsemblProtists:DDB0233134 GeneID:8616290 KEGG:ddi:DDB_G0268004
OMA:YLMEPAP Uniprot:Q55FQ0
Length = 459
Score = 169 (64.5 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 42/102 (41%), Positives = 62/102 (60%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
GD+ +RG D+ RG D+ +R D+E RG GDR+ RG G + ER D+ RG GD+
Sbjct: 262 GDRGDRGDRDRGDRG--DRSDRSDRDRE-RGRGDRDHRGSGGERER-ERDQRDRG-GDRG 316
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
GD+ +RG D+ +RG D+ +RG+ D+E RG D+ +R
Sbjct: 317 G-DRGDRSDRGRSDRGDRG--DRSDRGRDDRE-RGRDDRGDR 354
Score = 167 (63.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 43/116 (37%), Positives = 66/116 (56%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-----GDKEERGPGDKEKRG 120
GD+ +R D+E RG GD++ RG G + ER R++ G GD+ +RG D+ RG
Sbjct: 276 GDRSDRSDRDRE-RGRGDRDHRGSGGERERERDQRDRGGDRGGDRGDRSDRGRSDRGDRG 334
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEK-RGP----GDKEERAPGG 171
D+ RG D+E RG D+ +RG D+ RG D+++ RG GD+++R+ G
Sbjct: 335 --DRSDRGRDDRE-RGRDDRGDRGRDDR--RGGSDRDRDRGSRDDRGDRDDRSDRG 385
Score = 151 (58.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP------GDKEERGPGDREKRGPGDKEERGPGDKEKR 119
GD++ RG G + +R D+ +RG GD+ +RG DR RG D+ +RG D+E R
Sbjct: 291 GDRDHRGSGGERER-ERDQRDRGGDRGGDRGDRSDRGRSDRGDRG--DRSDRGRDDRE-R 346
Query: 120 GPGDKEKRGPGDKEERGPGDKE-ERGP----GDKEERG-QGDKEKRGPGDKEER 167
G D+ RG D+ RG D++ +RG GD+++R +G ++RG D++ R
Sbjct: 347 GRDDRGDRGRDDR--RGGSDRDRDRGSRDDRGDRDDRSDRGRDDRRGGSDRDHR 398
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 36/101 (35%), Positives = 53/101 (52%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPGDKEK 126
K + G R G G G +RG GDR++ GD+ +R D+E RG GD++
Sbjct: 238 KRDGGLSSNGNRSNGISSGSG-GSGGDRGDRGDRDRGDRGDRSDRSDRDRE-RGRGDRDH 295
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
RG G + ER D+ +RG GD+ +GD+ RG D+ +R
Sbjct: 296 RGSGGERER-ERDQRDRG-GDRGG-DRGDRSDRGRSDRGDR 333
Score = 124 (48.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/96 (37%), Positives = 52/96 (54%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEK-RGP--- 121
GD+ +RG D+ RG D+ +RG D+E RG DR RG D+ RG D+++ RG
Sbjct: 320 GDRSDRGRSDRGDRG--DRSDRGRDDRE-RGRDDRGDRGRDDR--RGGSDRDRDRGSRDD 374
Query: 122 -GDKEKRGP-GDKEERGPGDKEERGPGDKEERGQGD 155
GD++ R G + RG D++ R D+ R Q D
Sbjct: 375 RGDRDDRSDRGRDDRRGGSDRDHRI--DERRRDQRD 408
Score = 123 (48.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDKEKRGPGDKE 125
++E+ +KE+ K + G R G G G +RG GD+++ GD+
Sbjct: 221 EREKEKEKEKERMEKMKKRDGGLSSNGNRSNGISSGSG-GSGGDRGDRGDRDRGDRGDRS 279
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGP--GDKEERAPGG 171
R D+E RG GD++ RG G + ER + +++ G GD+ +R+ G
Sbjct: 280 DRSDRDRE-RGRGDRDHRGSGGERERERDQRDRGGDRGGDRGDRSDRG 326
Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KE+ +KEK +KE K + G R G G ++ GD+++
Sbjct: 217 EKEKEREKEKEK----EKERMEKMKKRDGGLSSNGNRSNGISSGSGGSGGDRGDRGDRDR 272
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
GD+ +R D+E RG GD++ RG G + +R ++++R GG
Sbjct: 273 GDRGDRSDRSDRDRE-RGRGDRDHRGSGGERER---ERDQRDRGG 313
Score = 65 (27.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 5 RGERA--SDKE-ERGPGDKEERGPGDKKAR 31
RG+R+ SD++ ERG GD++ RG G ++ R
Sbjct: 275 RGDRSDRSDRDRERGRGDRDHRGSGGERER 304
Score = 56 (24.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
RG+R D+ +R D+E RG GD+ RG
Sbjct: 272 RGDRG-DRSDRSDRDRE-RGRGDRDHRG 297
Score = 44 (20.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARG 32
GER ++++R G GD+ RG
Sbjct: 300 GERERERDQRDRGGDRGGDRGDRSDRG 326
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKAR 31
G D+ +RG D+ +RG D+ R
Sbjct: 258 GGSGGDRGDRGDRDRGDRGDRSDRSDR 284
Score = 37 (18.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 18 GDKEERGPGDKKARG 32
GD+ +RG D+ RG
Sbjct: 262 GDRGDRGDRDRGDRG 276
>UNIPROTKB|A4II09 [details] [associations]
symbol:eif3a "Eukaryotic translation initiation factor 3
subunit A" species:8364 "Xenopus (Silurana) tropicalis" [GO:0001732
"formation of translation initiation complex" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0003743 GO:GO:0005852 eggNOG:NOG236708 HOGENOM:HOG000246822
KO:K03254 HAMAP:MF_03000 HOVERGEN:HBG006128 GO:GO:0001732 CTD:8661
EMBL:BC135790 RefSeq:NP_001096173.1 UniGene:Str.55518 STRING:A4II09
PRIDE:A4II09 GeneID:100124719 KEGG:xtr:100124719
Xenbase:XB-GENE-994394 Uniprot:A4II09
Length = 1391
Score = 160 (61.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 52/128 (40%), Positives = 75/128 (58%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G E+R P G + RGP G ++RGP G E+RGP G + RGP G +++RGP
Sbjct: 1060 GFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRR 1119
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP-- 161
G ++ RGP G ++ RGP G +++RGP G E+RGP G +++RG +G E R P
Sbjct: 1120 GFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRR 1179
Query: 162 GDKEERAP 169
G ++R P
Sbjct: 1180 GFDDDRGP 1187
Score = 157 (60.3 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 51/128 (39%), Positives = 75/128 (58%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G +++R P G + RGP G ++RGP G E+RGP G + RGP G E+R P
Sbjct: 1010 GIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRR 1069
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP-- 161
G + RGP G + RGP G E+RGP G +++RGP G +++RG +G ++ RGP
Sbjct: 1070 GFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRR 1129
Query: 162 GDKEERAP 169
G +++R P
Sbjct: 1130 GFEDDRGP 1137
Score = 150 (57.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 50/125 (40%), Positives = 72/125 (57%)
Query: 69 EERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP--GDK 116
++ GP G +E RGP G +++R P G ++RGP G + RGP G E+RGP G
Sbjct: 993 DDAGPRRGFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGID 1052
Query: 117 EKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDK 164
+ RGP G E R P G ++RGP G ++RGP G E+RG +G ++ RGP G +
Sbjct: 1053 DDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFE 1112
Query: 165 EERAP 169
++R P
Sbjct: 1113 DDRGP 1117
Score = 149 (57.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 46/107 (42%), Positives = 65/107 (60%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G E+RGP G ++ RGP G +++RGP G +++RGP G + RGP G +++RGP
Sbjct: 1090 GFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRR 1149
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG 152
G E RGP G ++ RGP G E+R P G ++RGP G E+RG
Sbjct: 1150 GFDEDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRGPRRGLDEDRG 1196
Score = 147 (56.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 51/124 (41%), Positives = 69/124 (55%)
Query: 69 EERGP--GDKEKRGPGDK-EERGP--GDKEERGP--GDREKRGP--GDKEERGP--GDKE 117
E+RGP G +E RGP ++ GP G +E+RGP G + R P G ++RGP G +
Sbjct: 974 EDRGPKRGLEEDRGPRRGIDDAGPRRGFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDD 1033
Query: 118 KRGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDKE 165
RGP G E RGP G ++RGP G E+R P G ++RG +G + RGP G E
Sbjct: 1034 DRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDE 1093
Query: 166 ERAP 169
+R P
Sbjct: 1094 DRGP 1097
Score = 143 (55.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 49/123 (39%), Positives = 70/123 (56%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G +++RGP G ++ RGP G +++RGP G +++RGP G E RGP G +++RGP
Sbjct: 1110 GFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRR 1169
Query: 114 GDKEKRGP--GDKEKRGP--GDKEERGP---GDKEERGPGDKEERG--QGDKEKRGPGDK 164
G E R P G + RGP G E+RG GD R D ++RG +G + RGP
Sbjct: 1170 GFDEDRTPRRGFDDDRGPRRGLDEDRGSWRGGDDVPRRGAD-DDRGPRRGADDDRGPRRG 1228
Query: 165 EER 167
E+R
Sbjct: 1229 EDR 1231
Score = 137 (53.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/114 (40%), Positives = 64/114 (56%)
Query: 75 DKEKRGPGDKEERGP--GDKEERGPGDR-EKRGP--GDKEERGP--GDKEKRGP--GDKE 125
D+EK G E+RGP G +E+RGP + GP G +E+RGP G ++ R P G +
Sbjct: 964 DEEKGGSWRDEDRGPKRGLEEDRGPRRGIDDAGPRRGFEEDRGPRRGIEDDRAPRRGFDD 1023
Query: 126 KRGP--GDKEERGP--GDKEERGP--GDKEERG--QGDKEKRGP--GDKEERAP 169
RGP G ++RGP G E+RGP G ++RG +G E R P G ++R P
Sbjct: 1024 DRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGP 1077
Score = 131 (51.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 43/106 (40%), Positives = 62/106 (58%)
Query: 66 GDKEERGP--GDKEKRGP--GDKEERGP--GDKEERGP--GDREKRGP--GDKEERGP-- 113
G +++RGP G ++ RGP G E+RGP G +++RGP G E R P G ++RGP
Sbjct: 1130 GFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRGPRR 1189
Query: 114 G-DKEK---RGPGDKEKRGPGDKEERGP--GDKEERGPGDKEERGQ 153
G D+++ RG D +RG D +RGP G ++RGP E+R Q
Sbjct: 1190 GLDEDRGSWRGGDDVPRRGADD--DRGPRRGADDDRGPRRGEDRDQ 1233
Score = 58 (25.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 5 RGERASDKEERGP--GDKEERGP--GDKKARGP 33
RG R E+RGP G +++RGP G + RGP
Sbjct: 1085 RGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGP 1117
Score = 48 (22.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 5 RGERASDKEERGP--GDKEERGP 25
RG R E+RGP G ++RGP
Sbjct: 1035 RGPRRGFDEDRGPRRGIDDDRGP 1057
Score = 46 (21.3 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 10 SDKEERGPGDKEERGP--GDKKARGP 33
+D+E+ G E+RGP G ++ RGP
Sbjct: 963 ADEEKGGSWRDEDRGPKRGLEEDRGP 988
Score = 44 (20.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 5 RGERASDKEERGPGDK-EERGP--GDKKARGP 33
RG + +E+RGP ++ GP G ++ RGP
Sbjct: 976 RGPKRGLEEDRGPRRGIDDAGPRRGFEEDRGP 1007
Score = 35 (17.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 7 ERASDKEERGPGDKEER 23
E+A+ EER KEER
Sbjct: 786 EKAARLEERKRERKEER 802
Score = 35 (17.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 7 ERASDKEERGPGDKEERGPGDKKAR 31
+R + EER +EER GD R
Sbjct: 860 QRELEIEERERKREEERRGGDDTFR 884
>UNIPROTKB|Q02388 [details] [associations]
symbol:COL7A1 "Collagen alpha-1(VII) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005590 "collagen type VII"
evidence=TAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 Reactome:REACT_118779
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867 SUPFAM:SSF49265
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0005788 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0008544 GO:GO:0005604
EMBL:L23982 EMBL:L02870 EMBL:D13694 EMBL:M96984 EMBL:S51236
EMBL:M65158 EMBL:L06862 IPI:IPI00025418 IPI:IPI00795118 PIR:A54849
RefSeq:NP_000085.1 UniGene:Hs.476218 ProteinModelPortal:Q02388
SMR:Q02388 IntAct:Q02388 MINT:MINT-1390694 STRING:Q02388
MEROPS:I02.967 PhosphoSite:Q02388 DMDM:1345650 PaxDb:Q02388
PRIDE:Q02388 Ensembl:ENST00000328333 Ensembl:ENST00000454817
GeneID:1294 KEGG:hsa:1294 UCSC:uc003ctz.2 CTD:1294
GeneCards:GC03M048576 HGNC:HGNC:2214 HPA:CAB016357 MIM:120120
MIM:131705 MIM:131750 MIM:131850 MIM:132000 MIM:226600 MIM:604129
MIM:607523 neXtProt:NX_Q02388 Orphanet:158673 Orphanet:79407
Orphanet:216989 Orphanet:79408 Orphanet:89842 Orphanet:89841
Orphanet:79409 Orphanet:89839 Orphanet:158676 Orphanet:79410
Orphanet:89843 Orphanet:79411 PharmGKB:PA26730 HOGENOM:HOG000111866
HOVERGEN:HBG051053 InParanoid:Q02388 KO:K16628 OMA:RRVCTTA
OrthoDB:EOG4J117P PhylomeDB:Q02388 ChiTaRS:COL7A1 GenomeRNAi:1294
NextBio:5251 ArrayExpress:Q02388 Bgee:Q02388 CleanEx:HS_COL7A1
Genevestigator:Q02388 GermOnline:ENSG00000114270 GO:GO:0005590
Uniprot:Q02388
Length = 2944
Score = 162 (62.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 51/115 (44%), Positives = 63/115 (54%)
Query: 71 RGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGP----GDKEERGPGDKEKRGPG 122
RGP G+K +G PG+ G PG GP GDR + GP G + GPG +EK PG
Sbjct: 1666 RGPVGEKGDQGDPGEDGRNGSPGSS---GPKGDRGEPGPPGPPGRLVDTGPGAREKGEPG 1722
Query: 123 DKEKRGP-GDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
D+ + GP G K + G PG ERG G + G QGD RGP G+K +R P GL
Sbjct: 1723 DRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGL 1777
Score = 140 (54.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 47/116 (40%), Positives = 57/116 (49%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGPGDREKRGPGDKEERGP-GDKEK 118
GD E G G GP GD+ E GP G + GPG REK PGD+ + GP G K
Sbjct: 1676 GDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGD 1735
Query: 119 RG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPG 170
G PG +RG G + GP GD RGP G+K +RG + R D + A G
Sbjct: 1736 PGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAG 1791
Score = 136 (52.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/111 (38%), Positives = 55/111 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-GDKEERG-PGDKEKRG-PG 122
GD+ E GP PG + GPG +E+ PGDR + GP G K + G PG +RG G
Sbjct: 1694 GDRGEPGPPGP----PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEG 1749
Query: 123 DKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ GP GD RGP G+K +RGP + R D + PG P G
Sbjct: 1750 FRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGK---PGAAGPSGPNG 1797
Score = 136 (52.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/117 (39%), Positives = 59/117 (50%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRG-PGDKEERGP-GDKEKRG 120
PG + GPG +EK PGD+ + GP G K + G PG +RG G + GP GD RG
Sbjct: 1705 PGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRG 1764
Query: 121 P-GDKEKRGPGDKEERG--PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERA-PG 170
P G+K RGP + R G GP G G+ GD + G PG + E+ PG
Sbjct: 1765 PAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPG 1821
Score = 134 (52.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 52/123 (42%), Positives = 58/123 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG E+GP G GP GD+ GP G+K ERGP G RG PG PG K
Sbjct: 1461 PGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGR--PGAK 1518
Query: 117 EKRGPGDKEKRGPGDKEERG-PGDKEERGP---GDKEERGQ-GDKEKRGP-GDKEERAPG 170
GP R G+K E G PGD GP G K E+G G RG G + ER P
Sbjct: 1519 GPEGPPGPTGR-QGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPP 1577
Query: 171 GLV 173
GLV
Sbjct: 1578 GLV 1580
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 51/124 (41%), Positives = 61/124 (49%)
Query: 66 GDKEERG---PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRGP-GDKEERG-PG 114
GDK + G PG + +RG PG + E G PG + RG PG R +RG GD G G
Sbjct: 2458 GDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKG 2517
Query: 115 DKEKRGP--GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PGDKEERA 168
DK G RG GD ERGP G ++GP GD + GDK +G PGDK
Sbjct: 2518 DKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGD--PGDKGSKGEPGDKGSAG 2575
Query: 169 PGGL 172
GL
Sbjct: 2576 LPGL 2579
Score = 133 (51.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 49/126 (38%), Positives = 63/126 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-------GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP 113
PG+K + G PG GP G+K + GP GD G G+R RG PG RGP
Sbjct: 1612 PGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPG---VRGP 1668
Query: 114 -GDKEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRGPGDKE 165
G+K +G PG+ + G PG GP GD+ E GP G + G G +EK PGD+
Sbjct: 1669 VGEKGDQGDPGEDGRNGSPGSS---GPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRG 1725
Query: 166 ERAPGG 171
+ P G
Sbjct: 1726 QEGPRG 1731
Score = 132 (51.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 45/118 (38%), Positives = 56/118 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERG--PGDREKRG-PGDKEERGP-GDKEKR 119
PG + G PG K GD+ ERGP E G PG+ G PG +GP G K+
Sbjct: 1385 PGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKK 1444
Query: 120 GP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRGP----GDKEERAPGG 171
G GD E PG + G PG++ RGP +GD+ GP G+K ER P G
Sbjct: 1445 GEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGP-KGDRGFPGPLGEAGEKGERGPPG 1501
Score = 129 (50.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 43/117 (36%), Positives = 55/117 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG-- 120
PG K + GP G RGP GD RGP PG K GD+ ERGP + G
Sbjct: 1364 PGRKGDPGPSGPPGPRGPLGDPGPRGPPGL----PGTAMKGDKGDRGERGPPGPGEGGIA 1419
Query: 121 PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PGDKEERAPGGLV 173
PG+ G PG +GP G ++G GD E+ G + G PG++ R P G +
Sbjct: 1420 PGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAI 1476
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 54/176 (30%), Positives = 70/176 (39%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
RGE S E+ PG++ RG PG P
Sbjct: 1915 RGETGSKGEQGLPGERGLRGEPGSV----PNVDRLLETAGIKASALREIVETWDESSGSF 1970
Query: 64 XPGDKEERGP-GDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
P + RGP GD ++GP KE GP G ERG GDR GP G++ G
Sbjct: 1971 LPVPERRRGPKGDSGEQGPPGKE--GPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPG 2028
Query: 121 P----GDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPG 170
P G+ K G PG G G E PG++ ERG+ G++ ++G D PG
Sbjct: 2029 PSGLAGEPGKPGIPGLPGRAG-GVGEAGRPGERGERGEKGERGEQGR-DGPPGLPG 2082
Score = 118 (46.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 46/116 (39%), Positives = 57/116 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG E G PG K G PGD E G G+K + G RE R G K ERG PG +G
Sbjct: 1829 PGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRD-GPKGERGAPGILGPQG 1887
Query: 121 PGDKEKRGPGDKEERG-PGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-PGGL 172
P GP +G PG G G K +RG+ G K ++G PG++ R PG +
Sbjct: 1888 PPGLP--GPVGPPGQGFPG--VPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSV 1939
Score = 118 (46.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 49/117 (41%), Positives = 55/117 (47%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG-PGDKEERGP--GDREKRGP-GDKEERGP-- 113
PG + RG PG + +RG GD G GDK + G RG GD ERGP
Sbjct: 2486 PGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRG 2545
Query: 114 --GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRG-PGD 163
GDK RG GD PGDK +G PGDK G PG + G QG G PGD
Sbjct: 2546 LDGDKGPRGDNGD-----PGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGD 2597
Score = 116 (45.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 49/123 (39%), Positives = 52/123 (42%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGD---REKRG-PGDKEERGP-GD 115
PG G G GP GD ERGP G K E G PG E G PG K + GP G
Sbjct: 1316 PGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGP 1375
Query: 116 KEKRGP-GDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
RGP GD RGP G + GD+ ERGP E G E PG P
Sbjct: 1376 PGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ 1435
Query: 171 GLV 173
G V
Sbjct: 1436 GPV 1438
Score = 115 (45.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 48/120 (40%), Positives = 59/120 (49%)
Query: 66 GDKEERGP-------GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPG 114
GDK E GP G K + G PG + G PG + GP GDR G PG K ++G
Sbjct: 2641 GDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQG-- 2698
Query: 115 DKEKRG-PGDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
+K +RG PG GP G+ GP G GP E QG K +RGP G++ APG
Sbjct: 2699 EKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGL-QGQKGERGPPGERVVGAPG 2757
Score = 109 (43.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 47/118 (39%), Positives = 55/118 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERGPGDKEKRG 120
PG + GP GD+ G PG K ++G +K ERG PG GP G+ GP
Sbjct: 2673 PGKEGLIGPKGDRGFDGQPGPKGDQG--EKGERGTPGIGGFPGPSGNDGSAGPPGP---- 2726
Query: 121 PGDKEKRGP----GDKEERGPGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
PG RGP G K ERGP + G PG ERG QG GP G+K E A
Sbjct: 2727 PGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAA 2784
Score = 109 (43.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 43/117 (36%), Positives = 55/117 (47%)
Query: 66 GDKEERGPGDKEKRG-----PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKEK 118
G+K +RGP + R PG GP + GD + G PG + E+G PG
Sbjct: 1767 GEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA-GDPGRDGLPGLRGEQGLPGPSGP 1825
Query: 119 RG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEER-APG 170
G PG + G PG + G PGD E G G+K + G +E R G K ER APG
Sbjct: 1826 PGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRD-GPKGERGAPG 1881
Score = 107 (42.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 39/106 (36%), Positives = 52/106 (49%)
Query: 71 RGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG-DKEKRGP 129
R G E PG++ ERG +K ERG R+ GP PG GP ++ GP
Sbjct: 2047 RAGGVGEAGRPGERGERG--EKGERGEQGRD--GPPGLPGT-PGPPGPPGPKVSVDEPGP 2101
Query: 130 GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGG 171
G E+GP G K +G PG ++G +GD+ G GD+ E P G
Sbjct: 2102 GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRG 2147
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 40/107 (37%), Positives = 49/107 (45%)
Query: 73 PGDKEKRGPGDKEERGPGDKEERG-PGDREKRG-PGDKEERG-PGDKEKRG-PGDKEKRG 128
PG GP + GD G PG R ++G PG G PG + G PG K G
Sbjct: 1787 PGAAGPSGPNGAAGKA-GDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNG 1845
Query: 129 -PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGGL 172
PGD E G G+K + G +E R G K +RG PG + P GL
Sbjct: 1846 EPGDPGEDGRKGEKGDSGASGREGR-DGPKGERGAPGILGPQGPPGL 1891
Score = 101 (40.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 43/114 (37%), Positives = 50/114 (43%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDK--EKRG 120
GD+ G PG GP G K E GP PG PG K E+G PG + G
Sbjct: 2269 GDRGSPGVPGSPGLPGPVGPKGEPGPTG----APGQAVVGLPGAKGEKGAPGGLAGDLVG 2324
Query: 121 -PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPG 170
PG K RG PG + E+G + PGD E GQ G +G GD PG
Sbjct: 2325 EPGAKGDRGLPGPRGEKGEAGRAGE-PGDPGEDGQKGAPGPKGFKGDPGVGVPG 2377
Score = 101 (40.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 45/118 (38%), Positives = 52/118 (44%)
Query: 73 PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP----GDKEERG-PGDKEKRG- 120
PG RG PG ERG G G PG GP G G GDK G
Sbjct: 2406 PGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGV 2465
Query: 121 --PGDKEKRG-PGDKEERG-PGDKEERG----PGDKEERGQ-GDKEKRG-PGDKEERA 168
PG + +RG PG + E G PG + RG PG + ERG+ GD G GDK + A
Sbjct: 2466 GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSA 2523
Score = 98 (39.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 45/115 (39%), Positives = 55/115 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRG---PGDKEERG-PGDKE 117
PGD GP GP G+K + GP G + G G+R G PGD +G PGD
Sbjct: 1539 PGDPAVVGPA---VAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGD-- 1593
Query: 118 KRGP-GDKEKRGP-GDKE---ERG-PGDKEERGP-GDKEERGQ-GDKEKRGP-GD 163
RGP G + GP GD E+G PG GP G + G+ G+K GP GD
Sbjct: 1594 -RGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGD 1647
Score = 57 (25.1 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 5 RGERA--SDKEERG----PGDKEERG-PGDKKARG 32
RG R DK RG PGDK +G PGDK + G
Sbjct: 2541 RGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAG 2575
Score = 53 (23.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 14 ERGPGDKEERGPGDKKARGP 33
+ GPG +E+ PGD+ GP
Sbjct: 1710 DTGPGAREKGEPGDRGQEGP 1729
Score = 51 (23.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE+ D E+ PG + G PG++ RGP
Sbjct: 1444 KGEKG-DSEDGAPGLPGQPGSPGEQGPRGP 1472
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 13 EERGPGDKEERGP-GDKKARG 32
+E GPG E+GP G K A+G
Sbjct: 2097 DEPGPGLSGEQGPPGLKGAKG 2117
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
RGE+ PGD E G K A GP
Sbjct: 2338 RGEKGEAGRAGEPGDPGE--DGQKGAPGP 2364
Score = 41 (19.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGE E+ PG + RG PG + RG
Sbjct: 2474 RGEPGIRGEDGRPGQEGPRGLTGPPGSRGERG 2505
Score = 40 (19.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
+G+R G+K ERGP G +RG
Sbjct: 1479 KGDRGFPGPLGEAGEKGERGPPGPAGSRG 1507
Score = 40 (19.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 6 GERASDKEERGPGDKEERGP-GDK 28
G A +K E PGD+ + GP G K
Sbjct: 1712 GPGAREKGE--PGDRGQEGPRGPK 1733
Score = 38 (18.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 16 GP-GDKEERGP-GDKKARG 32
GP GD ERGP G K G
Sbjct: 1332 GPRGDPGERGPRGPKGEPG 1350
Score = 38 (18.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RGP 33
G R D PG++ GP K +GP
Sbjct: 2144 GPRGQDGNPGLPGERGMAGPEGKPGLQGP 2172
Score = 36 (17.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 16 GPGDKEERGPG 26
GP ++E GPG
Sbjct: 366 GPTQQQELGPG 376
Score = 36 (17.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER E PG + RGP
Sbjct: 2156 GERGMAGPEGKPGLQGPRGP 2175
Score = 35 (17.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 17 PGDKEERGPGDKKARGP 33
PG + GD+ RGP
Sbjct: 1394 PGTAMKGDKGDRGERGP 1410
Score = 34 (17.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 17 PGDKEERGPGDKKARG 32
PG K E+G + A G
Sbjct: 1441 PGKKGEKGDSEDGAPG 1456
Score = 33 (16.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RG + + + GDK E GP
Sbjct: 2628 RGVKGACGLDGEKGDKGEAGP 2648
>FB|FBgn0003861 [details] [associations]
symbol:trp "transient receptor potential" species:7227
"Drosophila melanogaster" [GO:0016028 "rhabdomere"
evidence=NAS;IDA;TAS] [GO:0050908 "detection of light stimulus
involved in visual perception" evidence=IMP] [GO:0005262 "calcium
channel activity" evidence=ISS;IMP] [GO:0009416 "response to light
stimulus" evidence=IMP;TAS] [GO:0006816 "calcium ion transport"
evidence=ISS;IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008086 "light-activated voltage-gated calcium channel
activity" evidence=NAS;IMP] [GO:0035997 "rhabdomere microvillus
membrane" evidence=IDA] [GO:0007603 "phototransduction, visible
light" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0008377 "light-induced release of
internally sequestered calcium ion" evidence=IDA] [GO:0015279
"store-operated calcium channel activity" evidence=NAS;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0019722
"calcium-mediated signaling" evidence=TAS] [GO:0008087
"light-activated voltage-gated calcium channel complex"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007602 "phototransduction" evidence=NAS]
[GO:0070588 "calcium ion transmembrane transport" evidence=IMP]
[GO:0071454 "cellular response to anoxia" evidence=IGI] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0016027 "inaD signaling complex"
evidence=TAS;IPI] [GO:0005218 "intracellular ligand-gated calcium
channel activity" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030845 "phospholipase C-inhibiting G-protein
coupled receptor signaling pathway" evidence=IMP] [GO:0050962
"detection of light stimulus involved in sensory perception"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007605 "sensory perception of sound" evidence=IMP]
InterPro:IPR002110 InterPro:IPR002153 InterPro:IPR004729
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PRINTS:PR01097
PROSITE:PS50088 SMART:SM00248 EMBL:AE014297 GO:GO:0016021
GO:GO:0008355 GO:GO:0008104 GO:GO:0019722 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005516
GO:GO:0007605 GO:GO:0007608 GO:GO:0050908 GO:GO:0071454
GO:GO:0015279 GO:GO:0016027 GO:GO:0005218 GO:GO:0030845
GO:GO:0008377 InterPro:IPR013555 PANTHER:PTHR10117 Pfam:PF08344
TIGRFAMs:TIGR00870 GeneTree:ENSGT00680000099866 KO:K05328
EMBL:M34394 EMBL:M21306 EMBL:BT009947 EMBL:M18634 PIR:JN0015
PIR:JU0092 RefSeq:NP_476768.1 UniGene:Dm.21694
ProteinModelPortal:P19334 SMR:P19334 IntAct:P19334 STRING:P19334
TCDB:1.A.4.1.1 PaxDb:P19334 PRIDE:P19334 EnsemblMetazoa:FBtr0085513
GeneID:43542 KEGG:dme:Dmel_CG7875 CTD:43542 FlyBase:FBgn0003861
eggNOG:NOG311539 InParanoid:P19334 OMA:HIFSINP OrthoDB:EOG4Z613F
PhylomeDB:P19334 ChiTaRS:trp GenomeRNAi:43542 NextBio:834457
Bgee:P19334 GermOnline:CG7875 Uniprot:P19334
Length = 1275
Score = 173 (66.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 2 QACRGERASDKEE--RGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXX 59
++ + E A+ KEE + K G K+ P
Sbjct: 1080 ESAKPEAAAKKEESSKTEASKPAATNGAAKSAAPSAPSDAKPDSKLKPGAAGAPEATKAT 1139
Query: 60 XXXXXPGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKR 119
P D+++ GP ++ K+ GD + PGD + D++K+ PGD +++ PGD + +
Sbjct: 1140 NGASKP-DEKKSGP-EEPKKAAGDSK---PGDDAK----DKDKK-PGDDKDKKPGDDKDK 1189
Query: 120 GPGDKEKRGPGDKEERGPGDKEERGPGD-KEERGQGDKEKRGPGDKEERAP 169
P D + P D +++ PGD +++ PGD K+++ DK+K+ P D +++ P
Sbjct: 1190 KPADNNDKKPADDKDKKPGDDKDKKPGDDKDKKPSDDKDKK-PADDKDKKP 1239
Score = 147 (56.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 41/162 (25%), Positives = 66/162 (40%)
Query: 17 PGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDKEERGPGDK 76
PGD + P ++ P P D + P K
Sbjct: 1068 PGDTKPAAPKPGESAKPEAAAKKEESSKTEASKPAATNGAAKSAAPSAPSDAK---PDSK 1124
Query: 77 EKRG----P-GDKEERGPGDKEERGPGDRE-KRGPGDKEERGPGD--KEK-RGPGDKEKR 127
K G P K G +E+ G E K+ GD + PGD K+K + PGD + +
Sbjct: 1125 LKPGAAGAPEATKATNGASKPDEKKSGPEEPKKAAGDSK---PGDDAKDKDKKPGDDKDK 1181
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
PGD +++ P D ++ P D +++ GD + + PGD +++ P
Sbjct: 1182 KPGDDKDKKPADNNDKKPADDKDKKPGDDKDKKPGDDKDKKP 1223
>POMBASE|SPAC19G12.10c [details] [associations]
symbol:cpy1 "vacuolar carboxypeptidase Y" species:4896
"Schizosaccharomyces pombe" [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0004185 "serine-type carboxypeptidase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007039 "vacuolar protein catabolic
process" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR001563 InterPro:IPR018202
Pfam:PF00450 PRINTS:PR00724 PROSITE:PS00131 PROSITE:PS00560
PomBase:SPAC19G12.10c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006508 GO:GO:0046982 GO:GO:0000324 GO:GO:0007039
GO:GO:0004185 eggNOG:COG2939 PANTHER:PTHR11802 KO:K13289
OrthoDB:EOG4Z9252 EMBL:D86560 PIR:T43236 RefSeq:NP_594425.1
ProteinModelPortal:O13849 SMR:O13849 IntAct:O13849 STRING:O13849
MEROPS:S10.A66 PRIDE:O13849 EnsemblFungi:SPAC19G12.10c.1
GeneID:2542465 KEGG:spo:SPAC19G12.10c NextBio:20803521
Uniprot:O13849
Length = 1002
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/81 (53%), Positives = 52/81 (64%)
Query: 84 KEERGPGDKEERGPGDREK-RGPGDKEE-RGPGDKEK-RGPGDKEK-RGPGDKEE-RGPG 138
+E GP + RGP D+E +GP DKE +GP DKE +GP DKE +GP DKE +GP
Sbjct: 348 EEHEGP--EHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPK 405
Query: 139 DKEE-RGPGDKEERGQGDKEK 158
DKE +GP DKE QG KEK
Sbjct: 406 DKEHHKGPKDKEHH-QGPKEK 425
Score = 169 (64.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 42/85 (49%), Positives = 53/85 (62%)
Query: 68 KEERGPGDKEKRGPGDKEE-RGPGDKEE-RGPGDREK-RGPGDKEE-RGPGDKEK-RGPG 122
+E GP + RGP DKE +GP DKE +GP D+E +GP DKE +GP DKE +GP
Sbjct: 348 EEHEGP--EHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPK 405
Query: 123 DKEK-RGPGDKEE-RGPGDKEERGP 145
DKE +GP DKE +GP +K P
Sbjct: 406 DKEHHKGPKDKEHHQGPKEKHNERP 430
Score = 166 (63.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 66 GDKEERGPGDKEK-RGPGDKEE-RGPGDKEE-RGPGDREK-RGPGDKEE-RGPGDKEK-R 119
G + RGP DKE +GP DKE +GP DKE +GP D+E +GP DKE +GP DKE +
Sbjct: 352 GPEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHK 411
Query: 120 GPGDKEK-RGPGDKEERGP 137
GP DKE +GP +K P
Sbjct: 412 GPKDKEHHQGPKEKHNERP 430
Score = 165 (63.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 43/84 (51%), Positives = 54/84 (64%)
Query: 76 KEKRGPGDKEERGPGDKEE-RGPGDREK-RGPGDKEE-RGPGDKEK-RGPGDKEK-RGPG 130
+E GP + RGP DKE +GP D+E +GP DKE +GP DKE +GP DKE +GP
Sbjct: 348 EEHEGP--EHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPK 405
Query: 131 DKEE-RGPGDKEE-RGPGDKE-ER 151
DKE +GP DKE +GP +K ER
Sbjct: 406 DKEHHKGPKDKEHHQGPKEKHNER 429
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 42/85 (49%), Positives = 51/85 (60%)
Query: 92 KEERGPGDREKRGPGDKEE-RGPGDKEK-RGPGDKEK-RGPGDKEE-RGPGDKEE-RGPG 146
+E GP RGP DKE +GP DKE +GP DKE +GP DKE +GP DKE +GP
Sbjct: 348 EEHEGP--EHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPK 405
Query: 147 DKEE-RGQGDKEK-RGPGDKEERAP 169
DKE +G DKE +GP +K P
Sbjct: 406 DKEHHKGPKDKEHHQGPKEKHNERP 430
>GENEDB_PFALCIPARUM|PF10_0374 [details] [associations]
symbol:PF10_0374 "Pf 11-1 protein" species:5833
"Plasmodium falciparum" [GO:0007276 "gamete generation"
evidence=TAS] InterPro:IPR003302 Pfam:PF02389 GO:GO:0005737
GO:GO:0018149 EMBL:AE014185 GO:GO:0007276 RefSeq:XP_001347658.2
IntAct:Q8I6U6 MINT:MINT-1554929 EnsemblProtists:PF10_0374:mRNA
GeneID:810531 KEGG:pfa:PF10_0374 EuPathDB:PlasmoDB:PF3D7_1038400
OMA:QPEQIQE ProtClustDB:CLSZ2847463 InterPro:IPR010867 Pfam:PF07391
Uniprot:Q8I6U6
Length = 9563
Score = 176 (67.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ ++++ P K+E+ P K+++ P K
Sbjct: 9411 PVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPK 9470
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9471 KEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVP 9515
Score = 175 (66.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ P K
Sbjct: 9395 PETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETK 9454
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9455 KEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVP 9499
Score = 174 (66.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ K+E+ P K+++ P K
Sbjct: 9403 PETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPK 9462
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9463 KEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVP 9507
Score = 174 (66.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 33/105 (31%), Positives = 65/105 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ K
Sbjct: 9387 PETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPK 9446
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9447 KEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAP 9491
Score = 172 (65.6 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9419 PAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPK 9478
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9479 KEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEK 9521
Score = 171 (65.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/104 (29%), Positives = 63/104 (60%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G K+E+ P K+++ P K+E+ K+E+ P ++++ K+E+ P K+++ P K+
Sbjct: 9260 GVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKK 9319
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
++ P K+E+ K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9320 EKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAP 9363
Score = 169 (64.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9427 PAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPK 9486
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ K+E+ P
Sbjct: 9487 KEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVP 9531
Score = 168 (64.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9435 PAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPK 9494
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9495 KEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEK 9537
Score = 167 (63.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 32/102 (31%), Positives = 64/102 (62%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K+++
Sbjct: 9382 KKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEK 9441
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9442 PAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAP 9483
Score = 166 (63.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 29/103 (28%), Positives = 61/103 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ ++++ P K+E+ P K+++ P K
Sbjct: 9267 PETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPK 9326
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9327 KEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK 9369
Score = 166 (63.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ K+E+ P K+++ P K
Sbjct: 9291 PAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPK 9350
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ K+E+ K+++ P K+E+ P
Sbjct: 9351 KEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVP 9395
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 30/102 (29%), Positives = 62/102 (60%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ P ++++ K+E+ K+++ P K+++
Sbjct: 9334 KKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEK 9393
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9394 VPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVP 9435
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9307 PEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPK 9366
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ K+E+ K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9367 KEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVP 9411
Score = 163 (62.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ K
Sbjct: 9315 PEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPK 9374
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9375 KEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVP 9419
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ K+++ P K+++
Sbjct: 9286 KKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEK 9345
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ P K+E+ K+++ K+E+ P
Sbjct: 9346 APAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVP 9387
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/102 (29%), Positives = 62/102 (60%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ G K+++ P K+E+ P K+E+ ++++ P K+E+ K+++ P K+++
Sbjct: 9254 KKEKQAGVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEK 9313
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ K+E+ K+++ P K+E+AP
Sbjct: 9314 VPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAP 9355
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 33/104 (31%), Positives = 62/104 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPG-DKEERGPGDKEKRGPGD 123
P K+E+ P K+++ P K+E+ P K+E+ P +K P K+E+ P K+++ P
Sbjct: 9339 PAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK-PAVPKKEKPAVPKKEKVPETKKEKVPET 9397
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
K+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9398 KKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEK 9441
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9451 PETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPK 9510
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ K+E+ P K+E+ + + K+ + R P
Sbjct: 9511 KEKVPAPKKEKPAVPKKEKVPETKKEKEKDSQPKKEKAKETSRPP 9555
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ K
Sbjct: 9323 PAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPK 9382
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9383 KEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVP 9427
Score = 161 (61.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9355 PAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPK 9414
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9415 KEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAP 9459
Score = 160 (61.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ ++++ P K+E+ P K+++ P K+++
Sbjct: 9302 KKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK 9361
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ K+E+ K+E+ K+++ P K+E+ P
Sbjct: 9362 APAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVP 9403
Score = 160 (61.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+ + K+++ G K+E+ P K+E+ P ++++ K+E+ P K+++ K
Sbjct: 9243 PIPKKGKSVEPKKEKQAGVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPK 9302
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ Q K+++ P K+E+AP
Sbjct: 9303 KEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAP 9347
Score = 156 (60.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K+++
Sbjct: 9374 KKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEK 9433
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9434 VPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAP 9475
Score = 151 (58.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9363 PAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPK 9422
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ K+E+ K+++ P K+E+AP
Sbjct: 9423 KEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAP 9467
Score = 117 (46.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/89 (24%), Positives = 51/89 (57%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ P K
Sbjct: 9475 PEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETK 9534
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQ 153
+++ + ++ + R P ++E+G+
Sbjct: 9535 KEKEKDSQPKKEKAKETSRPPKKEKEKGK 9563
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
E D+E+ +K+E+ D+K
Sbjct: 332 EEEDDEEKEEKDEKDEKDEKDEK 354
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
+ ++EE +KEE+ D+K
Sbjct: 326 DEEEEEEEEDDEEKEEKDEKDEK 348
>UNIPROTKB|Q8I6U6 [details] [associations]
symbol:PF10_0374 "Pf11-1 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0007276 "gamete generation" evidence=TAS]
InterPro:IPR003302 Pfam:PF02389 GO:GO:0005737 GO:GO:0018149
EMBL:AE014185 GO:GO:0007276 RefSeq:XP_001347658.2 IntAct:Q8I6U6
MINT:MINT-1554929 EnsemblProtists:PF10_0374:mRNA GeneID:810531
KEGG:pfa:PF10_0374 EuPathDB:PlasmoDB:PF3D7_1038400 OMA:QPEQIQE
ProtClustDB:CLSZ2847463 InterPro:IPR010867 Pfam:PF07391
Uniprot:Q8I6U6
Length = 9563
Score = 176 (67.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ ++++ P K+E+ P K+++ P K
Sbjct: 9411 PVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPK 9470
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9471 KEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVP 9515
Score = 175 (66.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ P K
Sbjct: 9395 PETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETK 9454
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9455 KEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVP 9499
Score = 174 (66.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ K+E+ P K+++ P K
Sbjct: 9403 PETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPK 9462
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9463 KEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVP 9507
Score = 174 (66.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 33/105 (31%), Positives = 65/105 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ K
Sbjct: 9387 PETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPK 9446
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9447 KEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAP 9491
Score = 172 (65.6 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9419 PAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPK 9478
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9479 KEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEK 9521
Score = 171 (65.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/104 (29%), Positives = 63/104 (60%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G K+E+ P K+++ P K+E+ K+E+ P ++++ K+E+ P K+++ P K+
Sbjct: 9260 GVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKK 9319
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
++ P K+E+ K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9320 EKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAP 9363
Score = 169 (64.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9427 PAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPK 9486
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ K+E+ P
Sbjct: 9487 KEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVP 9531
Score = 168 (64.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 31/103 (30%), Positives = 63/103 (61%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9435 PAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPK 9494
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9495 KEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEK 9537
Score = 167 (63.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 32/102 (31%), Positives = 64/102 (62%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K+++
Sbjct: 9382 KKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEK 9441
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9442 PAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAP 9483
Score = 166 (63.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 29/103 (28%), Positives = 61/103 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ ++++ P K+E+ P K+++ P K
Sbjct: 9267 PETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPK 9326
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+++ K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9327 KEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK 9369
Score = 166 (63.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ K+E+ P K+++ P K
Sbjct: 9291 PAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPK 9350
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ K+E+ K+++ P K+E+ P
Sbjct: 9351 KEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVP 9395
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 30/102 (29%), Positives = 62/102 (60%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ P ++++ K+E+ K+++ P K+++
Sbjct: 9334 KKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEK 9393
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9394 VPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVP 9435
Score = 164 (62.8 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9307 PEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPK 9366
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ K+E+ K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9367 KEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVP 9411
Score = 163 (62.4 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ K
Sbjct: 9315 PEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPK 9374
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9375 KEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVP 9419
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ K+E+ P K+E+ P ++++ P K+E+ K+++ P K+++
Sbjct: 9286 KKEKVPAPKKEKPAVPKKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEK 9345
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ P K+E+ K+++ K+E+ P
Sbjct: 9346 APAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVP 9387
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/102 (29%), Positives = 62/102 (60%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ G K+++ P K+E+ P K+E+ ++++ P K+E+ K+++ P K+++
Sbjct: 9254 KKEKQAGVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPKKEKVPEPKKEK 9313
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ P K+E+ K+E+ K+++ P K+E+AP
Sbjct: 9314 VPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAP 9355
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 33/104 (31%), Positives = 62/104 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPG-DKEERGPGDKEKRGPGD 123
P K+E+ P K+++ P K+E+ P K+E+ P +K P K+E+ P K+++ P
Sbjct: 9339 PAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK-PAVPKKEKPAVPKKEKVPETKKEKVPET 9397
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
K+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+
Sbjct: 9398 KKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEKVPAPKKEK 9441
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9451 PETKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPK 9510
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ K+E+ P K+E+ + + K+ + R P
Sbjct: 9511 KEKVPAPKKEKPAVPKKEKVPETKKEKEKDSQPKKEKAKETSRPP 9555
Score = 162 (62.1 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 30/105 (28%), Positives = 62/105 (59%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ K
Sbjct: 9323 PAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKAPAPKKEKPAVPKKEKPAVPK 9382
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+ P
Sbjct: 9383 KEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVP 9427
Score = 161 (61.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/105 (30%), Positives = 64/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ K+E+ K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9355 PAPKKEKAPAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPK 9414
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9415 KEKVPAPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAP 9459
Score = 160 (61.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ P K+++ P K+E+ P K+E+ ++++ P K+E+ P K+++ P K+++
Sbjct: 9302 KKEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAPAPKKEKAPAPKKEK 9361
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ K+E+ K+E+ K+++ P K+E+ P
Sbjct: 9362 APAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVP 9403
Score = 160 (61.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+ + K+++ G K+E+ P K+E+ P ++++ K+E+ P K+++ K
Sbjct: 9243 PIPKKGKSVEPKKEKQAGVKKEKVPETKKEKAPAPKKEKVQAPKKEKVPAPKKEKPAVPK 9302
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ P K+E+ Q K+++ P K+E+AP
Sbjct: 9303 KEKVPEPKKEKVPEPKKEKAPAPKKEKVQAPKKEKAPAPKKEKAP 9347
Score = 156 (60.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 31/102 (30%), Positives = 63/102 (61%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ K+++ P K+E+ P K+E+ P ++++ P K+E+ P K+++ P K+++
Sbjct: 9374 KKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPKKEKVPAPKKEK 9433
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P K+E+ K+E+ P K+E+ K+++ P K+E+AP
Sbjct: 9434 VPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAPEPKKEKAP 9475
Score = 151 (58.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/105 (29%), Positives = 63/105 (60%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ K+++ K+E+ P K+E+ P ++++ P K+E+ P K+++ P K
Sbjct: 9363 PAPKKEKPAVPKKEKPAVPKKEKVPETKKEKVPETKKEKVPETKKEKVPVPKKEKVPAPK 9422
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+++ P K+E+ P K+E+ K+E+ K+++ P K+E+AP
Sbjct: 9423 KEKVPAPKKEKVPAPKKEKPAVPKKEKVPETKKEKAPEPKKEKAP 9467
Score = 117 (46.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/89 (24%), Positives = 51/89 (57%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+E+ P K+++ P K+E+ P K+E+ P ++++ P K+E+ K+++ P K
Sbjct: 9475 PEPKKEKAPEPKKEKAPAPKKEKVPVPKKEKVPAPKKEKVPAPKKEKPAVPKKEKVPETK 9534
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQ 153
+++ + ++ + R P ++E+G+
Sbjct: 9535 KEKEKDSQPKKEKAKETSRPPKKEKEKGK 9563
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
E D+E+ +K+E+ D+K
Sbjct: 332 EEEDDEEKEEKDEKDEKDEKDEK 354
Score = 37 (18.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
+ ++EE +KEE+ D+K
Sbjct: 326 DEEEEEEEEDDEEKEEKDEKDEK 348
>GENEDB_PFALCIPARUM|PF07_0100 [details] [associations]
symbol:PF07_0100 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844506 RefSeq:XP_001349138.1
ProteinModelPortal:Q8IBL6 IntAct:Q8IBL6 MINT:MINT-1569768
EnsemblProtists:PF07_0100:mRNA GeneID:2655144 KEGG:pfa:PF07_0100
EuPathDB:PlasmoDB:PF3D7_0723700 Uniprot:Q8IBL6
Length = 1032
Score = 167 (63.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G+K G+K G+KE G G+K G++E G G+KE G G+KE G G+KE
Sbjct: 749 GEKGNIDGGEKGNIDGGEKENIGGGEKGNIDGGEKENIGGGEKENIGDGEKENIGGGEKE 808
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G+KE G GD++E GD++E GD + P D G
Sbjct: 809 NIGDGEKENIG-GDEKEHVGGDEKEHTCGDNQA-SPCDHRNHCDG 851
>UNIPROTKB|Q8IBL6 [details] [associations]
symbol:PF07_0100 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844506 RefSeq:XP_001349138.1
ProteinModelPortal:Q8IBL6 IntAct:Q8IBL6 MINT:MINT-1569768
EnsemblProtists:PF07_0100:mRNA GeneID:2655144 KEGG:pfa:PF07_0100
EuPathDB:PlasmoDB:PF3D7_0723700 Uniprot:Q8IBL6
Length = 1032
Score = 167 (63.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G+K G+K G+KE G G+K G++E G G+KE G G+KE G G+KE
Sbjct: 749 GEKGNIDGGEKGNIDGGEKENIGGGEKGNIDGGEKENIGGGEKENIGDGEKENIGGGEKE 808
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G+KE G GD++E GD++E GD + P D G
Sbjct: 809 NIGDGEKENIG-GDEKEHVGGDEKEHTCGDNQA-SPCDHRNHCDG 851
>UNIPROTKB|F1P5D3 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9031
"Gallus gallus" [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005586 "collagen type III"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0009314 "response to radiation" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0032964 "collagen biosynthetic
process" evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0043206
"extracellular fibril organization" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA] [GO:0050777
"negative regulation of immune response" evidence=IEA] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEA]
GO:GO:0005615 GO:GO:0034097 GO:GO:0030199 GO:GO:0007179
GO:GO:0007229 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
GO:GO:0042060 GO:GO:0050777 GO:GO:0009314 GO:GO:0018149
GO:GO:0071230 GO:GO:0043206 GO:GO:0005201
GeneTree:ENSGT00660000095287 GO:GO:0005586 EMBL:AADN02034558
EMBL:AADN02034559 IPI:IPI00821667 Ensembl:ENSGALT00000040216
ArrayExpress:F1P5D3 Uniprot:F1P5D3
Length = 310
Score = 127 (49.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 44/110 (40%), Positives = 54/110 (49%)
Query: 73 PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG---P-GDKEERGP-GDKEKRGPGDK 124
PG++ G PG K ++G PG K G PG R +RG P G GP GDK + GP
Sbjct: 151 PGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETGPAG- 209
Query: 125 EKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E+G PG G + PG K ER P GL
Sbjct: 210 ---APGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGE-PGGKGERGPPGL 255
Score = 124 (48.7 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 46/116 (39%), Positives = 54/116 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGPGDKEKRGP 121
PGDK E GP PG RG PG++ E+G PG G PG E PG K +RGP
Sbjct: 199 PGDKGETGPAG----APGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGE--PGGKGERGP 252
Query: 122 -GDKEKRGPGDKE--ERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G + + GP + GPG GP G K ERG G G PG + P G
Sbjct: 253 PGLRGEAGPPGAAGPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPG 308
Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/119 (39%), Positives = 54/119 (45%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEER-GPGDKE-ERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG K G PG +RGPG GP K + G PG GP GD+ E GP G
Sbjct: 4 PGPKGNEGAPGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGL 63
Query: 119 RG-PGDKEKRGPGDKE-ERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERA-PG 170
+G PG G K E GP GD G PG K E G G++ +GP G R PG
Sbjct: 64 QGLPGGPGPAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPG 122
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 49/122 (40%), Positives = 57/122 (46%)
Query: 65 PGDKEERGPGDKEKR-GPGDKE-ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERGPG GP K + G PG GP GDR + GP G +G PG
Sbjct: 13 PGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPGGP-- 70
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDK-EERA 168
GP G+ K G PG K + G PG K E G PG++ +G G RG PG E A
Sbjct: 71 -GPAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGA 129
Query: 169 PG 170
G
Sbjct: 130 KG 131
Score = 105 (42.0 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 47/123 (38%), Positives = 56/123 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDK 116
PG + G PG GP GD+ E GP G +G PG GPG E G PG+
Sbjct: 28 PGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPG-----GPGPAGENGKPGEP 82
Query: 117 EKRGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG----QGDKEKRGPGDKEERA 168
GP GD G PG K E G PG++ +GP G RG G + +GP A
Sbjct: 83 ---GPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGAKGPPGPPG-A 138
Query: 169 PGG 171
PGG
Sbjct: 139 PGG 141
Score = 50 (22.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K E G PG++ A+GP
Sbjct: 94 PGPKGENGIPGERGAQGP 111
Score = 45 (20.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1 MQACRGERASDKEERGPGDKEERGPGDKKARG 32
+Q GER + GDK E PG K A G
Sbjct: 147 LQGMPGERGASGSPGPKGDKGE--PGGKGADG 176
Score = 42 (19.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 14 ERGPGDKEERGPG 26
E PG ERGPG
Sbjct: 10 EGAPGKNGERGPG 22
>UNIPROTKB|P15988 [details] [associations]
symbol:COL6A2 "Collagen alpha-2(VI) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0070208 "protein
heterotrimerization" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0005615 GO:GO:0043234
GO:GO:0007155 GO:GO:0042383 GO:GO:0005581 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG256042
HOGENOM:HOG000111863 KO:K06238 GeneTree:ENSGT00530000063022
EMBL:X15041 EMBL:X56659 EMBL:X56595 EMBL:J04425 EMBL:J05475
IPI:IPI00586821 IPI:IPI00600978 PIR:S23377 PIR:S23378
RefSeq:NP_990679.1 UniGene:Gga.4257 UniGene:Gga.48694
ProteinModelPortal:P15988 STRING:P15988 PRIDE:P15988
Ensembl:ENSGALT00000009887 GeneID:396292 KEGG:gga:396292 CTD:1292
HOVERGEN:HBG051051 InParanoid:P15988 OMA:RALCNHD OrthoDB:EOG45TCMN
NextBio:20816343 Uniprot:P15988
Length = 1022
Score = 136 (52.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 46/117 (39%), Positives = 61/117 (52%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG 120
PG+K G PG+ +GPG + R G+ GP G+ +RG PG K +G PG K +RG
Sbjct: 387 PGEKGSPGIPGNPGAQGPGGTKGR-KGETGPPGPKGEPGRRGDPGTKGSKGGPGAKGERG 445
Query: 121 -PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
PG + RG PG+ +G GD+ GP G G+ G+ RG PGD R G
Sbjct: 446 DPGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAG 502
Score = 136 (52.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 50/127 (39%), Positives = 65/127 (51%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG----PGDK 116
PG K +RG DK G PGD ++G GD+ +G PG + GP G E+G PG+
Sbjct: 342 PGCKGDRG--DKGPDGYPGDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNP 399
Query: 117 EKRGPGD-KEKRG----PGDKEERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDK 164
+GPG K ++G PG K E G PG K +G PG K ERG G + RG PG+
Sbjct: 400 GAQGPGGTKGRKGETGPPGPKGEPGRRGDPGTKGSKGGPGAKGERGDPGPEGPRGLPGEV 459
Query: 165 EERAPGG 171
+ G
Sbjct: 460 GNKGARG 466
Score = 134 (52.2 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 54/123 (43%), Positives = 62/123 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRG-PGDKEERG----PGD 115
PG + RG PG+ +G GD+ GP G G PG+ RG PGD RG PG
Sbjct: 447 PGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAGPPGP 506
Query: 116 KEKRG-PGDKEK--RGP-GDKEERG-PGDKEERGP-GDKEERGQGDKEKRG-PGDKEERA 168
K RG PG RGP GDK E+G PG K RG G K QG K ++G PGD R
Sbjct: 507 KGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELGPKGT--QGTKGEKGEPGDPGPRG 564
Query: 169 -PG 170
PG
Sbjct: 565 EPG 567
Score = 127 (49.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 50/112 (44%), Positives = 58/112 (51%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG-PGDK 116
PG+ RG PGD RG PG K +RG PG GP RGP GDK E+G PG K
Sbjct: 483 PGNIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYP-GP-----RGPQGDKGEKGQPGPK 536
Query: 117 EKRGP-GDKEKRGPGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GD 163
RG G K +G K E+G PGD RG PG + G+ G + GP GD
Sbjct: 537 GGRGELGPKGTQGT--KGEKGEPGDPGPRGEPGTRGPPGEAGPEGTPGPPGD 586
Score = 56 (24.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
RG+ + + GPG K ERG PG + RG
Sbjct: 426 RGDPGTKGSKGGPGAKGERGDPGPEGPRG 454
Score = 51 (23.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 4 CRGERASDKEERG-PGDKEERGP-GDKKARG 32
C+G+R DK G PGD ++G GD+ +G
Sbjct: 344 CKGDRG-DKGPDGYPGDAGDQGERGDEGMKG 373
Score = 38 (18.4 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 17 PGDKEERGPGDKKAR 31
PG+ +GPG K R
Sbjct: 396 PGNPGAQGPGGTKGR 410
Score = 34 (17.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERGP----GDKKARG 32
+GER + + PG GP G+K + G
Sbjct: 363 QGERGDEGMKGDPGRPGRSGPPGPPGEKGSPG 394
>UNIPROTKB|F1MH65 [details] [associations]
symbol:BFSP1 "Filensin" species:9913 "Bos taurus"
[GO:0070307 "lens fiber cell development" evidence=IEA] [GO:0048469
"cell maturation" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005212 "structural constituent
of eye lens" evidence=IEA] GO:GO:0005739 GO:GO:0005886
GO:GO:0015629 GO:GO:0005882 InterPro:IPR016044 Pfam:PF00038
GO:GO:0005212 IPI:IPI00698211 UniGene:Bt.170 NextBio:20805577
CTD:631 KO:K10378 OMA:DGGQISK GO:GO:0048469 GO:GO:0070307
GeneTree:ENSGT00390000016976 EMBL:DAAA02035708 RefSeq:NP_776672.2
Ensembl:ENSBTAT00000029150 GeneID:281644 KEGG:bta:281644
Uniprot:F1MH65
Length = 757
Score = 152 (58.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 48/110 (43%), Positives = 62/110 (56%)
Query: 66 GDKEERGPGDKEKRGPGD-KEE--RGPGD--KEERGPGDREKRGPGDKEERGPGDKEKRG 120
G +E+ G KE+ GP + K E G GD KEE GP E +G G KEE GP E +G
Sbjct: 525 GPPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPP--EGKGDGVKEEGGP--PEGKG 580
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAP 169
G KE+ GP E +G G K+E P E +G+G KE+ GP +KE+ P
Sbjct: 581 DGVKEEGGP--PEGKGDGVKKEGEP--PEGKGEGLKEEEGPLQEKEDGRP 626
Score = 147 (56.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/103 (42%), Positives = 55/103 (53%)
Query: 70 ERGPGDKEKRGPGDKEERGPGD-KEE--RGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
E G G +++ G KEE GP + K E G GD K G E +G G KE+ GP E
Sbjct: 521 EEGQGPPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEEGGP--PEG 578
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+G G KEE GP E +G G K+E G+ E +G G KEE P
Sbjct: 579 KGDGVKEEGGP--PEGKGDGVKKE-GE-PPEGKGEGLKEEEGP 617
Score = 136 (52.9 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 48/119 (40%), Positives = 59/119 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP----GDKEKRGP 121
G+ E G GD K G E +G G KEE GP E +G G KEE GP GD K+
Sbjct: 545 GEPPE-GKGDSVKEEGGPPEGKGDGVKEEGGPP--EGKGDGVKEEGGPPEGKGDGVKKEG 601
Query: 122 GDKEKRGPGDKEERGPGDKEERG------PGDK-EERGQGD-KEKRGPGD--KEERAPG 170
E +G G KEE GP ++E G P DK +E+ + K +G D KEE A G
Sbjct: 602 EPPEGKGEGLKEEEGPLQEKEDGRPPTPHPADKGDEKNAKELKGLQGKQDDQKEEGARG 660
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 41/118 (34%), Positives = 56/118 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGP----GDREKRGPGDKEERGPGDKEKRGP 121
G E +G G KE+ GP E +G G KEE GP GD K+ E +G G KE+ GP
Sbjct: 560 GPPEGKGDGVKEEGGP--PEGKGDGVKEEGGPPEGKGDGVKKEGEPPEGKGEGLKEEEGP 617
Query: 122 GDKEKRG------PGDK-EERGPGD-KEERGPGD--KEERGQGDKEKRGPGDKEERAP 169
+++ G P DK +E+ + K +G D KEE +G PG + P
Sbjct: 618 LQEKEDGRPPTPHPADKGDEKNAKELKGLQGKQDDQKEEGARGPCPMVAPGPEGPSTP 675
Score = 107 (42.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 36/92 (39%), Positives = 44/92 (47%)
Query: 81 PGDKEERGPGDKE---ERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGP 137
P E P E E G G +++ G KEE GP + + P E +G KEE GP
Sbjct: 505 PDSGVEPSPQQPEPPLEEGQGPPQEKEDGLKEEGGPPEGKGEPP---EGKGDSVKEEGGP 561
Query: 138 GDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
E +G G KEE G G E +G G KEE P
Sbjct: 562 --PEGKGDGVKEE-G-GPPEGKGDGVKEEGGP 589
Score = 42 (19.8 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 13 EERGPGDKEERGPGDKKARGP 33
+E+ G KEE GP + K P
Sbjct: 528 QEKEDGLKEEGGPPEGKGEPP 548
Score = 40 (19.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 13 EERGPGDKEERGPGDKKARG 32
E +G KEE GP + K G
Sbjct: 549 EGKGDSVKEEGGPPEGKGDG 568
Score = 33 (16.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 13 EERGPGDKEERGPGDKKARG 32
+E+ G KE P D +G
Sbjct: 448 KEKVKGPKEPEPPADLYTKG 467
>UNIPROTKB|Q81UJ7 [details] [associations]
symbol:BAS0828 "LPXTG-motif cell wall anchor domain
protein" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF05738 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR008454 InterPro:IPR008970 SUPFAM:SSF49478
RefSeq:NP_843384.1 RefSeq:YP_017508.1 RefSeq:YP_027104.1
ProteinModelPortal:Q81UJ7 IntAct:Q81UJ7 DNASU:1088739
EnsemblBacteria:EBBACT00000010006 EnsemblBacteria:EBBACT00000018613
EnsemblBacteria:EBBACT00000020504 GeneID:1088739 GeneID:2819694
GeneID:2850173 KEGG:ban:BA_0871 KEGG:bar:GBAA_0871 KEGG:bat:BAS0828
HOGENOM:HOG000002269 OMA:KAPQGYK ProtClustDB:CLSK396830
BioCyc:BANT260799:GJAJ-908-MONOMER
BioCyc:BANT261594:GJ7F-938-MONOMER InterPro:IPR026588
TIGRFAMs:TIGR04215 Uniprot:Q81UJ7
Length = 969
Score = 162 (62.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/106 (35%), Positives = 75/106 (70%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++
Sbjct: 818 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEE 870
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
++ PG++ E+ PG++ E+ PG++ E+ G+ EK PG KE PG
Sbjct: 871 TEK-PGEETEK-PGEETEK-PGEETEKPGGETEK--PG-KETEKPG 910
Score = 147 (56.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/102 (35%), Positives = 71/102 (69%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++
Sbjct: 832 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEE 884
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEER-GQG----DKEKRGP 161
++ PG++ E+ PG + E+ PG + E+ G+G DKEK P
Sbjct: 885 TEK-PGEETEK-PGGETEK-PGKETEKPGEGMENPDKEKENP 923
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/105 (33%), Positives = 71/105 (67%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+E G + PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++ +
Sbjct: 807 NKKETSKGPEN---PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETE 858
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG++ E+ PG++ E+ PG++ E+ + EK PG++ E+ PGG
Sbjct: 859 K-PGEETEK-PGEETEK-PGEETEKPGEETEK--PGEETEK-PGG 897
Score = 131 (51.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ G+ EK PG K
Sbjct: 853 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEKPGGETEK--PG-K 904
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQG 154
E PG+ E P DKE+ P E+GQG
Sbjct: 905 ETEKPGEGMEN-P-DKEKENP-TLPEKGQG 931
>TIGR_CMR|BA_0871 [details] [associations]
symbol:BA_0871 "LPXTG-motif cell wall anchor domain
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF05738 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR008454 InterPro:IPR008970 SUPFAM:SSF49478
RefSeq:NP_843384.1 RefSeq:YP_017508.1 RefSeq:YP_027104.1
ProteinModelPortal:Q81UJ7 IntAct:Q81UJ7 DNASU:1088739
EnsemblBacteria:EBBACT00000010006 EnsemblBacteria:EBBACT00000018613
EnsemblBacteria:EBBACT00000020504 GeneID:1088739 GeneID:2819694
GeneID:2850173 KEGG:ban:BA_0871 KEGG:bar:GBAA_0871 KEGG:bat:BAS0828
HOGENOM:HOG000002269 OMA:KAPQGYK ProtClustDB:CLSK396830
BioCyc:BANT260799:GJAJ-908-MONOMER
BioCyc:BANT261594:GJ7F-938-MONOMER InterPro:IPR026588
TIGRFAMs:TIGR04215 Uniprot:Q81UJ7
Length = 969
Score = 162 (62.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/106 (35%), Positives = 75/106 (70%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++
Sbjct: 818 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEE 870
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
++ PG++ E+ PG++ E+ PG++ E+ G+ EK PG KE PG
Sbjct: 871 TEK-PGEETEK-PGEETEK-PGEETEKPGGETEK--PG-KETEKPG 910
Score = 147 (56.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/102 (35%), Positives = 71/102 (69%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++
Sbjct: 832 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEE 884
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEER-GQG----DKEKRGP 161
++ PG++ E+ PG + E+ PG + E+ G+G DKEK P
Sbjct: 885 TEK-PGEETEK-PGGETEK-PGKETEKPGEGMENPDKEKENP 923
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/105 (33%), Positives = 71/105 (67%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+E G + PG++ E+ PG++ E+ PG+ ++ PG++ E+ PG++ ++ PG++ +
Sbjct: 807 NKKETSKGPEN---PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETE 858
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG++ E+ PG++ E+ PG++ E+ + EK PG++ E+ PGG
Sbjct: 859 K-PGEETEK-PGEETEK-PGEETEKPGEETEK--PGEETEK-PGG 897
Score = 131 (51.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG++ E+ PG++ ++ PG++ E+ PG++ E+ PG+ ++ PG++ E+ G+ EK PG K
Sbjct: 853 PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEK-PGEETEKPGGETEK--PG-K 904
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQG 154
E PG+ E P DKE+ P E+GQG
Sbjct: 905 ETEKPGEGMEN-P-DKEKENP-TLPEKGQG 931
>UNIPROTKB|Q06002 [details] [associations]
symbol:BFSP1 "Filensin" species:9913 "Bos taurus"
[GO:0016020 "membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005212 "structural constituent of eye lens" evidence=IEA]
GO:GO:0005737 GO:GO:0016020 GO:GO:0005882 InterPro:IPR016044
Pfam:PF00038 PROSITE:PS00226 GO:GO:0005212 EMBL:X72388
IPI:IPI00698211 PIR:S32103 UniGene:Bt.170 ProteinModelPortal:Q06002
STRING:Q06002 PRIDE:Q06002 eggNOG:NOG77008 HOGENOM:HOG000095201
HOVERGEN:HBG050684 InParanoid:Q06002 OrthoDB:EOG4MCX00
NextBio:20805577 Uniprot:Q06002
Length = 756
Score = 148 (57.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 46/106 (43%), Positives = 60/106 (56%)
Query: 66 GDKEERGPGDKEKRGPGD-KEE--RGPGD--KEERGPGDREKRGPGDKEERGPGDKEKRG 120
G +E+ G KE+ GP + K E G GD KEE GP E +G G KEE GP E +G
Sbjct: 524 GPPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPP--EGKGDGVKEEGGP--PEGKG 579
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G KE+ GP E +G G K+E P E +G+G KE+ GP ++E
Sbjct: 580 DGVKEEGGP--PEGKGDGVKKEGEP--PEGKGEGLKEEEGPLQEKE 621
Score = 147 (56.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/103 (42%), Positives = 55/103 (53%)
Query: 70 ERGPGDKEKRGPGDKEERGPGD-KEE--RGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
E G G +++ G KEE GP + K E G GD K G E +G G KE+ GP E
Sbjct: 520 EEGQGPPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEEGGP--PEG 577
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+G G KEE GP E +G G K+E G+ E +G G KEE P
Sbjct: 578 KGDGVKEEGGP--PEGKGDGVKKE-GE-PPEGKGEGLKEEEGP 616
Score = 141 (54.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 42/99 (42%), Positives = 51/99 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G+ E G GD K G E +G G KEE GP E +G G KEE GP E +G G K+
Sbjct: 544 GEPPE-GKGDSVKEEGGPPEGKGDGVKEEGGPP--EGKGDGVKEEGGP--PEGKGDGVKK 598
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
+ P E +G G KEE GP ++E GQ P DK
Sbjct: 599 EGEP--PEGKGEGLKEEEGPLQEKEDGQSPTPH--PADK 633
Score = 132 (51.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/108 (39%), Positives = 52/108 (48%)
Query: 65 PGDKEERGPGDKE---KRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGP 121
P E P E + G G +E+ G KEE GP + G G+ E G GD K
Sbjct: 504 PDSGVEPSPQQPEPPLEEGQGPPQEKEDGLKEEGGPPE----GKGEPPE-GKGDSVKEEG 558
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
G E +G G KEE GP E +G G KEE G G E +G G K+E P
Sbjct: 559 GPPEGKGDGVKEEGGP--PEGKGDGVKEE-G-GPPEGKGDGVKKEGEP 602
Score = 114 (45.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGP----GDREKRGPGDKEERGPGDKEKRGP 121
G E +G G KE+ GP E +G G KEE GP GD K+ E +G G KE+ GP
Sbjct: 559 GPPEGKGDGVKEEGGP--PEGKGDGVKEEGGPPEGKGDGVKKEGEPPEGKGEGLKEEEGP 616
Query: 122 GDKEKRG------PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+++ G P DK + KE +G K++ Q ++ RGP P G
Sbjct: 617 LQEKEDGQSPTPHPADKGDE-KNAKELKGLQGKQD-DQKEEGARGPCPMVAPGPEG 670
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 13 EERGPGDKEERGPGDKKARGP 33
+E+ G KEE GP + K P
Sbjct: 527 QEKEDGLKEEGGPPEGKGEPP 547
Score = 40 (19.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 13 EERGPGDKEERGPGDKKARG 32
E +G KEE GP + K G
Sbjct: 548 EGKGDSVKEEGGPPEGKGDG 567
Score = 33 (16.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 13 EERGPGDKEERGPGDKKARG 32
+E+ G KE P D +G
Sbjct: 447 KEKVKGPKEPEPPADLYTKG 466
>ZFIN|ZDB-GENE-050626-88 [details] [associations]
symbol:rbmx2 "RNA binding motif protein, X-linked 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050626-88 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00600000084414 EMBL:AL935199
IPI:IPI00505218 Ensembl:ENSDART00000143373 Bgee:F1RAH8
Uniprot:F1RAH8
Length = 450
Score = 136 (52.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 25/106 (23%), Positives = 54/106 (50%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G+++ G +++ G D+E G ++ G+R++ G ++ G D+E+ G ++
Sbjct: 277 GERQRERDGGRQRDGERDRERERDGGRQR--DGERQRERDGGRQRDGERDRERERDGGRQ 334
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ G D+E+ G ++ D+E G +++ G D+E+ GG
Sbjct: 335 RDGDRDREQERDGGRQRDVERDRERERDGGRQRDGDRDQEQERDGG 380
Score = 132 (51.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G+++ G +++ G D+E G ++ G DRE+ G ++ D+E+ G ++
Sbjct: 307 GERQRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQRDVERDRERERDGGRQ 366
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ G D+E+ G ++ KE G +++ G D+E GG
Sbjct: 367 RDGDRDQEQERDGGRQRDVEKVKERERDGGRQRDGERDRERERDGG 412
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/111 (26%), Positives = 55/111 (49%)
Query: 67 DKEERGPGDKEK---RG---PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
D+E GDKE+ RG G+++ G ++ G DRE+ G ++ G++++
Sbjct: 256 DREGEREGDKERERDRGRQRDGERQRERDGGRQRDGERDRERERDGGRQR--DGERQRER 313
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G +++ G D+E G ++ G D+E+ G +++ D+E GG
Sbjct: 314 DGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQRDVERDRERERDGG 364
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKE---ERG---PGDREKRGPGDKEERGPGDKEKR 119
G K +R + ++R D+E GDKE +RG G+R++ G ++ G D+E+
Sbjct: 240 GKKTDRRHAETQQR-ERDREGEREGDKERERDRGRQRDGERQRERDGGRQRDGERDRERE 298
Query: 120 GPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G +++ G+++ G ++ G D+E G +++ G D+E+ GG
Sbjct: 299 RDGGRQR--DGERQRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGG 348
Score = 121 (47.7 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 24/100 (24%), Positives = 49/100 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G ++ G D+E+ G ++ G D+E+ G R++ D+E G +++ G D+E
Sbjct: 315 GGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQRDVERDRERERDGGRQRDGDRDQE 374
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE 165
+ G ++ KE G ++ G+ D+E+ G ++
Sbjct: 375 QERDGGRQRDVEKVKERERDGGRQRDGERDRERERDGGRQ 414
Score = 119 (46.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/105 (23%), Positives = 50/105 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+E G +++ G+++ G ++ G DRE+ G ++ G D+E+ G +++
Sbjct: 294 DRERERDGGRQR--DGERQRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQR 351
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
D+E G ++ G D+E+ G +++ KE GG
Sbjct: 352 DVERDRERERDGGRQRDGDRDQEQERDGGRQRDVEKVKERERDGG 396
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKE---ERG---PGDKEKRG 120
D++E+ + +R G K +R + ++R DRE GDKE +RG G++++
Sbjct: 225 DEQEQLKEKEREREEGKKTDRRHAETQQR-ERDREGEREGDKERERDRGRQRDGERQRER 283
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G +++ G D+E G ++ G+++ G +++ G D+E GG
Sbjct: 284 DGGRQRDGERDRERERDGGRQR--DGERQRERDGGRQRDGERDRERERDGG 332
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+E G +++ G D+E+ G ++ DRE+ G ++ G D+E+ G +++
Sbjct: 324 DRERERDGGRQRDGDRDREQERDGGRQRDVERDRERERDGGRQRDGDRDQEQERDGGRQR 383
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEK 158
KE G ++ G D+E G +++
Sbjct: 384 DVEKVKERERDGGRQRDGERDRERERDGGRQR 415
Score = 105 (42.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 24/106 (22%), Positives = 50/106 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G ++ G D+E+ G ++ D+E G R++ G D+E+ G +++ KE
Sbjct: 331 GGRQRDGDRDREQERDGGRQRDVERDRERERDGGRQRDGDRDQEQERDGGRQRDVEKVKE 390
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE-ERAPG 170
+ G ++ G D+E G ++ + +++ D+E +R G
Sbjct: 391 RERDGGRQRDGERDRERERDGGRQRDEERVRQRERDRDRERDRGNG 436
Score = 40 (19.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 7 ERASDKEERGPGDKE-ERGPGDKK 29
+R D+E GDKE ER G ++
Sbjct: 252 QRERDREGEREGDKERERDRGRQR 275
Score = 37 (18.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 GERASDKE-ERGPGDKEERGPGDKKARG 32
GER DKE ER G ++ G ++ G
Sbjct: 259 GEREGDKERERDRG-RQRDGERQRERDG 285
Score = 33 (16.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARG 32
ER ++ G D+E G ++ G
Sbjct: 282 ERDGGRQRDGERDRERERDGGRQRDG 307
Score = 33 (16.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARG 32
ER ++ G D+E G ++ G
Sbjct: 312 ERDGGRQRDGERDRERERDGGRQRDG 337
>UNIPROTKB|F1SKM1 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:CU633242 Ensembl:ENSSSCT00000012432 ArrayExpress:F1SKM1
Uniprot:F1SKM1
Length = 2939
Score = 145 (56.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 47/112 (41%), Positives = 59/112 (52%)
Query: 71 RGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGPGDKEKRGPGDKE 125
RGP G+K +G PG+ G PG +G G+ GP G + G G EK PGD+
Sbjct: 1662 RGPVGEKGDQGDPGEDGRNGSPGPSGSKGDRGEPGPPGPPGRLVDTGLGAGEKGEPGDRG 1721
Query: 126 KRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
+ GP G K + GP G ERG G + G QGD RGP G+K +R P GL
Sbjct: 1722 QEGPRGPKGDPGPPGASGERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1773
Score = 136 (52.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 51/122 (41%), Positives = 61/122 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG----PGDKEERG-PGDREKRGPGDKEERGPGDKE 117
PG++ RG PGD GP GD+ G PG+K ERG PG +GP R PG +
Sbjct: 1461 PGERGLRGFPGDT---GPKGDRGLTGAVGEPGEKGERGSPGPVGPQGPPGVPGR-PGAEG 1516
Query: 118 KRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQ-GDKEKRGP----GDKEERAPG 170
GP G +RG +K E G PGD GPG +G+ GD GP G K ER P
Sbjct: 1517 PEGPPGPTGRRG--EKGEPGRPGDPAV-GPGGAGAKGEKGDMGPTGPKGATGTKGERGPP 1573
Query: 171 GL 172
GL
Sbjct: 1574 GL 1575
Score = 130 (50.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/103 (41%), Positives = 48/103 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
PG K + G PG RGP GD RGP PG K GD+ ERGP GPG
Sbjct: 1361 PGQKGDPGLPGPPGSRGPSGDPGPRGPPGF----PGTAVKGEKGDRGERGPP-----GPG 1411
Query: 123 DKEKRGPGDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRGPG 162
D PGD G PG +GP G E+G+ GD E PG
Sbjct: 1412 DGTA-APGDPGLPGLPGSPGPQGPVGPPGEKGEKGDSEDGAPG 1453
Score = 129 (50.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 50/126 (39%), Positives = 60/126 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERG-PGDREKRG----PGDKEERGP-GDKE 117
PG K ++G D PG + ERG PG + E G PG RG PG + ERG GD
Sbjct: 2448 PGLKGDKG--DPGAGPPGARGERGEPGVRGEDGRPGPEGPRGLMGPPGGRGERGEKGDAG 2505
Query: 118 KRG-PGDKEKRGP--GDKEERGP-GDKEERGP----GDKEERGQ-GDKEKRGP-GDKEER 167
G GDK G RG GD ERGP GDK RG GD ++G G+ +R
Sbjct: 2506 SSGLKGDKGDSAVTVGPPGPRGAKGDMGERGPRGLDGDKGPRGDSGDPGEKGTKGEPGDR 2565
Query: 168 APGGLV 173
GL+
Sbjct: 2566 GSAGLL 2571
Score = 128 (50.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 47/123 (38%), Positives = 61/123 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERG-PGDREKRG-PGD---KEERG----- 112
PG +GP G ++G GD E+ PG + G PG+R RG PGD K +RG
Sbjct: 1426 PGSPGPQGPVGPPGEKGEKGDSEDGAPGLPGQPGVPGERGLRGFPGDTGPKGDRGLTGAV 1485
Query: 113 --PGDKEKRG-PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRG-PGDKEERA 168
PG+K +RG PG +GP R PG + GP R +G+K + G PGD
Sbjct: 1486 GEPGEKGERGSPGPVGPQGPPGVPGR-PGAEGPEGPPGPTGR-RGEKGEPGRPGDPAV-G 1542
Query: 169 PGG 171
PGG
Sbjct: 1543 PGG 1545
Score = 127 (49.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 45/117 (38%), Positives = 58/117 (49%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG 120
PG + G G EK PGD+ + GP G K + GP G +RG G + GP GD RG
Sbjct: 1701 PGRLVDTGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGISGLRGPPGPQGDPGVRG 1760
Query: 121 P-GDKEKRGPGDKEERG--PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
P G+K RGP + R G GP G + G+ GD + G PG + E+ P G
Sbjct: 1761 PAGEKGDRGPPGLDGRSGLDGKPGAAGPPGLQGTAGKAGDPGRDGLPGLRGEQGPPG 1817
Score = 125 (49.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 46/123 (37%), Positives = 60/123 (48%)
Query: 65 PGDKEERG-PGDKEKRGP-------GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP 113
PG+K + G PG GP G+K + GP GD G G+R RG PG RGP
Sbjct: 1608 PGEKGDPGRPGTPGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPG---ARGP 1664
Query: 114 -GDKEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERA 168
G+K +G PG+ + G PG +G G+ GP G + G G EK PGD+ +
Sbjct: 1665 VGEKGDQGDPGEDGRNGSPGPSGSKGDRGEPGPPGPPGRLVDTGLGAGEKGEPGDRGQEG 1724
Query: 169 PGG 171
P G
Sbjct: 1725 PRG 1727
Score = 122 (48.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 46/117 (39%), Positives = 58/117 (49%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-GDK---EERGPGDKEKRG 120
G E G PG++ RG +K ERG + PG GP G K +E G G +G
Sbjct: 2045 GSVGEAGRPGERGVRG--EKGERGEQQGRDGSPGLPGPPGPPGPKVAVDEIGSGLSRDQG 2102
Query: 121 P-GDKEKRG-PGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
P G K +G PG +RGP K +RG PG K +RG+ G + G PG ER GL
Sbjct: 2103 PPGLKGAKGEPGSDGDRGP--KGDRGMPGIKGDRGEPGQRGHDGSPGLPGERGVAGL 2157
Score = 121 (47.7 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 66 GDKEERG-PGDKEKRG-PG---DKEERG-------PGDKEERGPGDREKRGPGDKEERGP 113
G+K ++G PG+ + G PG K +RG PG + G G EK PGD+ + GP
Sbjct: 1666 GEKGDQGDPGEDGRNGSPGPSGSKGDRGEPGPPGPPGRLVDTGLGAGEKGEPGDRGQEGP 1725
Query: 114 -GDKEKRGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERA 168
G K GP G +RG G + GP GD RGP G+K +RG + R D + A
Sbjct: 1726 RGPKGDPGPPGASGERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGA 1785
Query: 169 PG 170
G
Sbjct: 1786 AG 1787
Score = 119 (46.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 43/116 (37%), Positives = 56/116 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG 120
G+K + GP GD PG ERG G RGP G++ +G PG+ G PG +G
Sbjct: 1633 GEKGDEGPPGDPGL--PGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGSKG 1690
Query: 121 P-GDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
G+ GP G + G G E+ PGD+ + G +G K GP G ER GL
Sbjct: 1691 DRGEPGPPGPPGRLVDTGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGISGL 1746
Score = 117 (46.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 46/122 (37%), Positives = 54/122 (44%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP--GDREKRGPGDKEERG-PGDKEK 118
PG +G PG RG PG++ RGP G+ E G G PG K + G PG
Sbjct: 1316 PGTSGPKGSPGWPGPRGEPGERGPRGPKGEPGEPGRVIGGEGPGLPGQKGDPGLPGPPGS 1375
Query: 119 RGP-GDKEKRGP----GDKEERGPGDKEERGP---GDKEERGQGDKEKRG-PGDKEERAP 169
RGP GD RGP G + GD+ ERGP GD GD G PG + P
Sbjct: 1376 RGPSGDPGPRGPPGFPGTAVKGEKGDRGERGPPGPGDGTA-APGDPGLPGLPGSPGPQGP 1434
Query: 170 GG 171
G
Sbjct: 1435 VG 1436
Score = 109 (43.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 46/115 (40%), Positives = 53/115 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG + GP GD+ G PG K ++G +K ERGP G GP G GP G
Sbjct: 2667 PGKEGLIGPKGDRGFDGQPGPKGDQG--EKGERGPPGTGGFPGPRGSDGSSGPPGPPGSV 2724
Query: 120 GPGDKEKRGPGDKEERGPGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
GP E G K ERGP + G PG ERG QG GP G+K E A
Sbjct: 2725 GPKGPEGL-QGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2778
Score = 109 (43.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 48/120 (40%), Positives = 56/120 (46%)
Query: 66 GDKEERGP-------GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPG 114
GDK E GP G K + G PG G PG + GP GDR G PG K ++G
Sbjct: 2635 GDKGEAGPPGRPGLAGRKGELGEPGIPGPSGAPGKEGLIGPKGDRGFDGQPGPKGDQG-- 2692
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
+K +RGP G GP G GP G GP E QG K +RGP G+ APG
Sbjct: 2693 EKGERGPPGTGGFPGPRGSDGSSGPPGPPGSVGPKGPEGL-QGQKGERGPPGESVVGAPG 2751
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/120 (37%), Positives = 57/120 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGPGDKEERG-PGDREKRGPGDKEERGPGDKEKRGP- 121
GD ERGP G + GP GD PG+K + G PG GP ++ G+K GP
Sbjct: 1585 GDPGERGPIGLTGRAGPPGDSGP--PGEKGDPGRPGTPGLVGPRGRDGE-VGEKGDEGPP 1641
Query: 122 GDKEKRGPGDKEERG-PGDKEERGP-GDKEERGQGDKEKR----GP----GDKEERAPGG 171
GD PG ERG G RGP G+K ++G ++ R GP GD+ E P G
Sbjct: 1642 GDPGL--PGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGSKGDRGEPGPPG 1699
Score = 108 (43.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/115 (38%), Positives = 57/115 (49%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG E+ PG K G PGD E G G+K + G RE G K ERG PG +GP
Sbjct: 1828 PG--EDGRPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGHD-GPKGERGAPGSPGLQGP 1884
Query: 122 -GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-PGGL 172
G + GP + PG GP K +RG+ G K ++G PG++ R PG +
Sbjct: 1885 PGLPGQVGPPG--QGFPGMPGSSGP--KGDRGEIGPKGEQGLPGERGLRGEPGSV 1935
Score = 106 (42.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGPGDKEERGPGDKEKRGP 121
P + RGP G+ +RGP KE GP G +RGP GDR GP G++ GP
Sbjct: 1968 PVPERLRGPKGNPGERGPPGKE--GPIGFSGDRGPKGDRGDPGPQGPPGLALGERGPPGP 2025
Query: 122 ----GDKEKRG-PGDKEERGPGDKEERGPGDKEERG-QGDKEKRGPGDKEERAPG 170
G+ K G PG G + R PG ERG +G+K +RG + +PG
Sbjct: 2026 PGLAGEPGKPGIPGLPGRAGSVGEAGR-PG---ERGVRGEKGERGEQQGRDGSPG 2076
Score = 105 (42.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 47/116 (40%), Positives = 54/116 (46%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERG-PGDKEERGPGDREKRGP-GDKEERGP----GDKE 117
PG + GP G +RG +K E G PGD GPG +G GD GP G K
Sbjct: 1512 PGAEGPEGPPGPTGRRG--EKGEPGRPGDPAV-GPGGAGAKGEKGDMGPTGPKGATGTKG 1568
Query: 118 KRGP------GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
+RGP GD GP GD ERGP G GP GD G+ GD + G PG
Sbjct: 1569 ERGPPGLALPGDP---GPKGDPGERGPIGLTGRAGPPGDSGPPGEKGDPGRPGTPG 1621
Score = 104 (41.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/115 (37%), Positives = 56/115 (48%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERGP-GDREKRG-PGDKEERGPGDKEKRGP 121
G+ + GP G++ G PG E PG GP G G PG K ++G D P
Sbjct: 2407 GEMGQPGPSGERGLAGLPG--REGAPGPLGPPGPAGSVGAPGAPGLKGDKG--DPGAGPP 2462
Query: 122 GDKEKRG-PGDKEERG-PGDKEERG----PGDKEERGQ-GDKEKRG-PGDKEERA 168
G + +RG PG + E G PG + RG PG + ERG+ GD G GDK + A
Sbjct: 2463 GARGERGEPGVRGEDGRPGPEGPRGLMGPPGGRGERGEKGDAGSSGLKGDKGDSA 2517
Score = 102 (41.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 47/134 (35%), Positives = 60/134 (44%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG-PGDKEERGP--GDREKRGP-GDKEERGP-- 113
PG + RG PG + +RG GD G GDK + G RG GD ERGP
Sbjct: 2480 PGPEGPRGLMGPPGGRGERGEKGDAGSSGLKGDKGDSAVTVGPPGPRGAKGDMGERGPRG 2539
Query: 114 --GDKEKRG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG--- 160
GDK RG PG+K +G PGD+ G G + GP G+ G GD G
Sbjct: 2540 LDGDKGPRGDSGDPGEKGTKGEPGDRGSAGLLGPRGLTGPKGEPGAAGIPGDPGSPGKDG 2599
Query: 161 -PGDKEERAPGGLV 173
PG + ++ G +
Sbjct: 2600 VPGVRGDKGDVGFM 2613
Score = 99 (39.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 46/122 (37%), Positives = 53/122 (43%)
Query: 66 GDKEERG----PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDK--E 117
G ERG PG GP G K E GP PG PG K E+G PG +
Sbjct: 2260 GKDGERGVPGVPGSPGLPGPVGPKGEPGPMGT----PGQAVIGPPGAKGEKGTPGGLAGD 2315
Query: 118 KRG-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ----GDKEKRG-PGDKEERAPG 170
G PG K RG PG + E+G + PGD E GQ G K +G PG + PG
Sbjct: 2316 LVGEPGAKGDRGLPGPRGEKGEAGRAGE-PGDPGEDGQKGAPGLKGNKGDPGVGAQGPPG 2374
Query: 171 GL 172
L
Sbjct: 2375 PL 2376
Score = 51 (23.0 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
++ +GE SD + RGP K +RG PG K RG
Sbjct: 2106 LKGAKGEPGSDGD-RGP--KGDRGMPGIKGDRG 2135
Score = 49 (22.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R PG+K ERG PG +GP
Sbjct: 1476 KGDRGLTGAVGEPGEKGERGSPGPVGPQGP 1505
Score = 46 (21.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PGD+ + GP G K GP
Sbjct: 1713 EKGEPGDRGQEGPRGPKGDPGP 1734
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 RASDKEERG-PGDKEERGPGDKKARG 32
R +K E G PGD GPG A+G
Sbjct: 1526 RRGEKGEPGRPGDPAV-GPGGAGAKG 1550
Score = 41 (19.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 16 GPGDKEERGPGDKKARGP 33
G G+K E PGD+ GP
Sbjct: 1710 GAGEKGE--PGDRGQEGP 1725
Score = 41 (19.5 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ D ++ PG K +G A+GP
Sbjct: 2345 GDPGEDGQKGAPGLKGNKGDPGVGAQGP 2372
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG+ ++G PG K +G
Sbjct: 2335 KGEAGRAGEPGDPGEDGQKGAPGLKGNKG 2363
Score = 38 (18.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 5 RGERASDKEERG-PGDKEERG-PG 26
RGE K E+G PG++ RG PG
Sbjct: 1911 RGE-IGPKGEQGLPGERGLRGEPG 1933
Score = 37 (18.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 17 PGDKEERGPGDKKARG 32
PG+K E+G + A G
Sbjct: 1438 PGEKGEKGDSEDGAPG 1453
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 18 GDKEERGPGDKKARG 32
GDK + G G ARG
Sbjct: 2452 GDKGDPGAGPPGARG 2466
Score = 36 (17.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 5 RGERASDKEERGP----GDKEERGP 25
+GE+ D GP G K ERGP
Sbjct: 1549 KGEKG-DMGPTGPKGATGTKGERGP 1572
Score = 35 (17.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 18 GDKEERGP 25
GD+ ERGP
Sbjct: 1400 GDRGERGP 1407
Score = 33 (16.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RG + + + GDK E GP
Sbjct: 2622 RGVKGACGLDGEKGDKGEAGP 2642
>UNIPROTKB|E1BI98 [details] [associations]
symbol:COL6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 GO:GO:0005576 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 CTD:1291 KO:K06238 OMA:VKENYAE
GeneTree:ENSGT00530000063022 EMBL:DAAA02003502 IPI:IPI00713573
RefSeq:NP_001137337.1 UniGene:Bt.23508 PRIDE:E1BI98
Ensembl:ENSBTAT00000015668 GeneID:511422 KEGG:bta:511422
NextBio:20869920 Uniprot:E1BI98
Length = 1027
Score = 139 (54.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 50/121 (41%), Positives = 61/121 (50%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRG-PGDKEERGP-GDKEKR 119
PG K + G G K ++G PG E G PG PGD + G PG E+G GD+
Sbjct: 358 PGPKGDPGAFGLKGQKGEPGADGEPGRPGSTGP--PGDEGEPGEPGPPGEKGEAGDEGNA 415
Query: 120 GPGDK--EKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP----GDKEERAPG 170
GP E+ GPG++ RG PG RGP GD E G QGD+ + GP GD E P
Sbjct: 416 GPDGAPGERGGPGERGPRGTPG---ARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPI 472
Query: 171 G 171
G
Sbjct: 473 G 473
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 51/137 (37%), Positives = 65/137 (47%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERGP----GDREKRG----PGDKEE 110
PG+K E G PG GP G K E+G G+K RGP G++ KRG G K E
Sbjct: 277 PGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGE 336
Query: 111 RG-PGDKEKRG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-------GDKEK 158
G PG +G PG +GP G K + G G K ++G PG E G+ GD+ +
Sbjct: 337 TGFPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGE 396
Query: 159 RG----PGDKEERAPGG 171
G PG+K E G
Sbjct: 397 PGEPGPPGEKGEAGDEG 413
Score = 45 (20.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 QACRGERAS--DKEERGP-GDKEERG 24
Q +GE+ S +K RGP G K E+G
Sbjct: 298 QGMKGEKGSRGEKGSRGPKGYKGEKG 323
>UNIPROTKB|P12109 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9606
"Homo sapiens" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEA]
[GO:0005589 "collagen type VI" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005576 "extracellular region"
evidence=IDA;TAS] [GO:0043234 "protein complex" evidence=IPI]
[GO:0048407 "platelet-derived growth factor binding" evidence=IDA]
[GO:0070208 "protein heterotrimerization" evidence=IPI] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030133 "transport vesicle"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0043234 GO:GO:0030198 GO:GO:0007155
GO:GO:0042383 GO:GO:0005788 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0030133 GO:GO:0071230 DrugBank:DB00039
GO:GO:0048407 CTD:1291 eggNOG:NOG256042 HOVERGEN:HBG095954
KO:K06238 OrthoDB:EOG4WWRHX EMBL:X15879 EMBL:X15880 EMBL:BC005159
EMBL:BC052575 EMBL:X99109 EMBL:X99135 EMBL:X99136 EMBL:M20776
EMBL:S75420 EMBL:S75385 EMBL:S75388 EMBL:S75390 EMBL:S75392
EMBL:S75394 EMBL:S75396 EMBL:S75398 EMBL:S75400 EMBL:S75402
EMBL:S75404 EMBL:S75406 EMBL:S75408 EMBL:S75410 EMBL:S75412
EMBL:S75414 EMBL:S75416 EMBL:S75418 EMBL:X06194 EMBL:M27447
IPI:IPI00291136 PIR:S05377 RefSeq:NP_001839.2 UniGene:Hs.474053
ProteinModelPortal:P12109 SMR:P12109 IntAct:P12109 STRING:P12109
PhosphoSite:P12109 DMDM:125987811 REPRODUCTION-2DPAGE:IPI00291136
REPRODUCTION-2DPAGE:P12109 PaxDb:P12109 PeptideAtlas:P12109
PRIDE:P12109 Ensembl:ENST00000361866 GeneID:1291 KEGG:hsa:1291
UCSC:uc002zhu.1 GeneCards:GC21P047401 HGNC:HGNC:2211 HPA:HPA019142
HPA:HPA029401 MIM:120220 MIM:158810 MIM:254090 neXtProt:NX_P12109
Orphanet:610 Orphanet:75840 PharmGKB:PA26727 InParanoid:P12109
OMA:VKENYAE PhylomeDB:P12109 ChiTaRS:COL6A1 GenomeRNAi:1291
NextBio:5227 PMAP-CutDB:P12109 ArrayExpress:P12109 Bgee:P12109
CleanEx:HS_COL6A1 Genevestigator:P12109 GermOnline:ENSG00000142156
GO:GO:0005589 Uniprot:P12109
Length = 1028
Score = 138 (53.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 51/122 (41%), Positives = 62/122 (50%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGP-GDKEK 118
PG K + G G K ++G PG E G PG GP GD + G PG E+G GD+
Sbjct: 358 PGPKGDPGAFGLKGEKGEPGADGEAGRPGSS---GPSGDEGQPGEPGPPGEKGEAGDEGN 414
Query: 119 RGPGDK--EKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP----GDKEERAP 169
GP E+ GPG++ RG PG RGP GD E G QGD+ + GP GD E P
Sbjct: 415 PGPDGAPGERGGPGERGPRGTPGT---RGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGP 471
Query: 170 GG 171
G
Sbjct: 472 IG 473
Score = 108 (43.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 52/137 (37%), Positives = 65/137 (47%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERGP----GDREKRG----PGDKEE 110
PG+K E G PG GP G K E+G G+K RGP G++ KRG G K E
Sbjct: 277 PGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGVKGE 336
Query: 111 RG-PGDKEKRG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-------GDKEK 158
G PG +G PG +GP G K + G G K E+G PG E G+ GD+ +
Sbjct: 337 MGYPGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKGEPGADGEAGRPGSSGPSGDEGQ 396
Query: 159 RG----PGDKEERAPGG 171
G PG+K E G
Sbjct: 397 PGEPGPPGEKGEAGDEG 413
Score = 45 (20.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 QACRGERAS--DKEERGP-GDKEERG 24
Q +GE+ S +K RGP G K E+G
Sbjct: 298 QGMKGEKGSRGEKGSRGPKGYKGEKG 323
>RGD|1565398 [details] [associations]
symbol:Col6a1 "collagen, type VI, alpha 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0031012 "extracellular
matrix" evidence=IEA;ISO] [GO:0042383 "sarcolemma"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0048407 "platelet-derived growth factor binding"
evidence=IEA;ISO] [GO:0070208 "protein heterotrimerization"
evidence=IEA;ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA;ISO] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 RGD:1565398 GO:GO:0005576
GO:GO:0043234 GO:GO:0042383 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GO:GO:0071230 OrthoDB:EOG4WWRHX
OMA:VKENYAE GeneTree:ENSGT00530000063022 IPI:IPI00371853
PRIDE:D3ZUL3 Ensembl:ENSRNOT00000001679 Uniprot:D3ZUL3
Length = 1025
Score = 136 (52.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 49/121 (40%), Positives = 61/121 (50%)
Query: 65 PGDKEERGP-GDKEKRGPGDKE-ERG-PGDKEERGPGDREKRG-PGDKEERGP-GDKEKR 119
PG K + G G K ++G E E G PG+ PGD + G PG E+G GD+
Sbjct: 357 PGPKGDAGAFGLKGEKGEAGAEGEAGRPGNSGP--PGDEGEPGEPGPPGEKGEAGDEGNA 414
Query: 120 GPGDK--EKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP----GDKEERAPG 170
GP E+ GPG++ RG PG RGP GD E G QGD+ + GP GD E P
Sbjct: 415 GPDGAPGERGGPGERGPRGTPG---VRGPRGDPGEAGPQGDQGREGPVGIPGDPGESGPI 471
Query: 171 G 171
G
Sbjct: 472 G 472
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 51/137 (37%), Positives = 62/137 (45%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERGP----GDREKRG----PGDKEE 110
PG+K E G PG GP G K E+G G+K RGP G++ KRG G K E
Sbjct: 276 PGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGE 335
Query: 111 RG----PGDKEKRG-------PGDKEKRGP-GDKEERGPGDKE-ERG-PGDKEERG-QGD 155
G PG K G PG K G G K E+G E E G PG+ G +G+
Sbjct: 336 TGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGLKGEKGEAGAEGEAGRPGNSGPPGDEGE 395
Query: 156 KEKRGP-GDKEERAPGG 171
+ GP G+K E G
Sbjct: 396 PGEPGPPGEKGEAGDEG 412
Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 QACRGERAS--DKEERGP-GDKEERG 24
Q +GE+ S +K RGP G K E+G
Sbjct: 297 QGMKGEKGSRGEKGSRGPKGYKGEKG 322
>UNIPROTKB|Q5TAT6 [details] [associations]
symbol:COL13A1 "Collagen alpha-1(XIII) chain" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005600 "collagen type XIII" evidence=TAS]
[GO:0005201 "extracellular matrix structural constituent"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007160 "cell-matrix adhesion" evidence=IPI] [GO:0001958
"endochondral ossification" evidence=ISS] [GO:0001763
"morphogenesis of a branching structure" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=IEP] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
Reactome:REACT_118779 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0030198 GO:GO:0008201 GO:GO:0005911 GO:GO:0005788
GO:GO:0016337 GO:GO:0007160 HOGENOM:HOG000085653 InterPro:IPR008160
Pfam:PF01391 DrugBank:DB01076 DrugBank:DB00641 GO:GO:0001958
GO:GO:0005201 HOVERGEN:HBG004933 EMBL:AJ293624 EMBL:AL138925
EMBL:AC024601 EMBL:AC025426 EMBL:BC136385 EMBL:M59217 EMBL:M33653
EMBL:M15524 EMBL:M20803 EMBL:M20795 EMBL:M20796 EMBL:M20797
EMBL:M20798 EMBL:M20799 EMBL:M20800 EMBL:M20801 EMBL:M20802
EMBL:M20804 EMBL:M20805 IPI:IPI00299472 IPI:IPI00375408
IPI:IPI00375412 IPI:IPI00375413 IPI:IPI00375414 IPI:IPI00375417
IPI:IPI00377036 IPI:IPI00383356 IPI:IPI00844070 IPI:IPI01008962
PIR:B40983 RefSeq:NP_001123575.1 RefSeq:NP_542988.3
RefSeq:NP_542990.3 RefSeq:NP_542991.3 RefSeq:NP_542992.3
UniGene:Hs.695934 ProteinModelPortal:Q5TAT6 STRING:Q5TAT6
PhosphoSite:Q5TAT6 DMDM:74745860 PaxDb:Q5TAT6 PRIDE:Q5TAT6
Ensembl:ENST00000354547 Ensembl:ENST00000357811
Ensembl:ENST00000398978 Ensembl:ENST00000517713
Ensembl:ENST00000520267 Ensembl:ENST00000522165 GeneID:1305
KEGG:hsa:1305 UCSC:uc001jqk.2 UCSC:uc001jql.3 UCSC:uc021prz.1
UCSC:uc021psc.1 CTD:1305 GeneCards:GC10P071561 H-InvDB:HIX0025928
HGNC:HGNC:2190 HPA:HPA050392 MIM:120350 neXtProt:NX_Q5TAT6
PharmGKB:PA26706 eggNOG:NOG254293 KO:K16617 OMA:TSPGCHC
OrthoDB:EOG4894NC GenomeRNAi:1305 NextBio:5305 ArrayExpress:Q5TAT6
Bgee:Q5TAT6 Genevestigator:Q5TAT6 GO:GO:0005600 GO:GO:0001763
Uniprot:Q5TAT6
Length = 717
Score = 132 (51.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 48/116 (41%), Positives = 58/116 (50%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKR 119
PGD GP G K GP G K E G PG E+G G+ + G PG+K E G EK
Sbjct: 505 PGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG----EKG 560
Query: 120 GPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGGL 172
PG + PG E PG +G PG K E G G K ++G G+K +R P GL
Sbjct: 561 NPGAEVPGLPGP--EGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGL 614
Score = 118 (46.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 49/122 (40%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERGP-GD 115
PG +G PG K + G G K E+G G+K +RGP G G PG GP G
Sbjct: 576 PGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 635
Query: 116 KEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERA 168
GP G++ +G PG G G G PGDK RG+ G K RGP GDK ++ A
Sbjct: 636 PGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 695
Query: 169 PG 170
PG
Sbjct: 696 PG 697
Score = 45 (20.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PGDK ERG G++ GP
Sbjct: 414 PGDKGERGAAGEQGPDGP 431
Score = 41 (19.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE+ + PG+K E G G+ A P
Sbjct: 538 KGEKGETGQAGSPGEKGEAGEKGNPGAEVP 567
Score = 38 (18.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 5 RGERASDKEER--GP-GDKEERGPGD 27
+GER + E+ GP G K E G G+
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPGKGE 442
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE+ E+ PG + PG + GP
Sbjct: 551 GEKGEAGEKGNPGAEVPGLPGPEGPPGP 578
Score = 34 (17.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 6 GERASDKEERGPGDKEERG-------PGDKKARG 32
G + + PG+K E+G PG+K G
Sbjct: 524 GVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG 557
Score = 33 (16.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1 MQACRGERASDKEERGPGD 19
M A R +A+ RGPG+
Sbjct: 1 MVAERTHKAAATGARGPGE 19
>UNIPROTKB|E1B7H2 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:DAAA02054431 IPI:IPI00706167 Ensembl:ENSBTAT00000025418
Uniprot:E1B7H2
Length = 2934
Score = 148 (57.2 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 48/115 (41%), Positives = 62/115 (53%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
G+K ++G PG++ + G PG GP GD+ E GP PG + G G EK PG
Sbjct: 1664 GEKGDQGDPGEEGRNGSPGPS---GPKGDRGEPGPPG----APGRLVDVGLGAGEKGEPG 1716
Query: 123 DKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
D+ + GP G K + GP G ERG G + G QGD RGP G+K +R P GL
Sbjct: 1717 DRGQEGPRGPKGDPGPPGASGERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGL 1771
Score = 127 (49.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 49/121 (40%), Positives = 62/121 (51%)
Query: 65 PGDKEERGP-GDKEKRG----PGDKEERGP-GDK---EERGPG-DREKRGPGDKEERG-P 113
PG++ ERG G++ ++G PG GP G K +E G G RE+ PG K +G P
Sbjct: 2051 PGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLSREQGPPGFKGAKGDP 2110
Query: 114 GDKEKRGPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERA-P 169
G RGP K RG PG K +RG PG + G PG ERG E + PG + R P
Sbjct: 2111 GSDGDRGP--KGDRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPEGK-PGLQGPRGTP 2167
Query: 170 G 170
G
Sbjct: 2168 G 2168
Score = 127 (49.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/117 (38%), Positives = 57/117 (48%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG 120
PG + G G EK PGD+ + GP G K + GP G +RG G + GP GD RG
Sbjct: 1699 PGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLRGPPGPQGDPGVRG 1758
Query: 121 P-GDKEKRGPGDKEERG--PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
P G+K RGP + R G GP G G+ GD + G PG + E+ P G
Sbjct: 1759 PAGEKGDRGPPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQGPPG 1815
Score = 127 (49.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 49/126 (38%), Positives = 63/126 (50%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERG----PGDKEERGP-GDREKRG-PGDKEERGP 113
PG+K + G PG GP G+ E+G PGD G G+R RG PG RGP
Sbjct: 1606 PGEKGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDPGLPGKAGERGLRGAPG---ARGP 1662
Query: 114 -GDKEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRGPGDKE 165
G+K +G PG++ + G PG GP GD+ E GP G + G G EK PGD+
Sbjct: 1663 VGEKGDQGDPGEEGRNGSPGPS---GPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRG 1719
Query: 166 ERAPGG 171
+ P G
Sbjct: 1720 QEGPRG 1725
Score = 124 (48.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/116 (42%), Positives = 59/116 (50%)
Query: 66 GDKEERG---PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRGP-GDKEERG-PG 114
GDK + G PG + +RG PG + E G PG + RG PG R +RG GD G G
Sbjct: 2449 GDKGDTGAGLPGARGERGEPGVRGEDGRPGLEGPRGLAGPPGIRGERGEKGDAGASGLKG 2508
Query: 115 DKEKRGP--GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PGDK 164
DK G RG GD ERGP G ++GP GD E G+K +G PGDK
Sbjct: 2509 DKGDSAVILGPPGPRGAKGDSGERGPRGIDGDKGPRGDSGE--PGEKGTKGEPGDK 2562
Score = 122 (48.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 45/116 (38%), Positives = 55/116 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGPGDREKRGPGDKEERGP-GDKEK 118
GD E G G GP GD+ E GP G + G G EK PGD+ + GP G K
Sbjct: 1670 GDPGEEGRNGSPGPSGPKGDRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGD 1729
Query: 119 RGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPG 170
GP G +RG G + GP GD RGP G+K +RG + R D + A G
Sbjct: 1730 PGPPGASGERGVSGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGASG 1785
Score = 122 (48.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 46/119 (38%), Positives = 60/119 (50%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG-PGDREKRG-PGD---KEERG----PG 114
PG + GP G+K ++G D E+ PG + G PG+R RG PGD K +RG G
Sbjct: 1430 PGPQGSVGPPGEKGEKG--DCEDGAPGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAG 1487
Query: 115 DKEKRG-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+K +RG PG +G PG GP + E PG RG+ + R PGD PGG
Sbjct: 1488 EKGERGSPGPVGPQGLPGVAGRPGP-EGPEGPPGPTGRRGEKGEPGR-PGDPAV-GPGG 1543
Score = 121 (47.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 47/117 (40%), Positives = 59/117 (50%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG E G PG K G PGD E G G+K + G RE R G K ERG PG +G
Sbjct: 1823 PGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPGREGRD-GPKGERGAPGSPGLQG 1881
Query: 121 P-GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-PGGLV 173
P G + GP + PG GP K +RG+ G + ++G PG++ R PG LV
Sbjct: 1882 PPGLPGQVGPPG--QGFPGVPGSSGP--KGDRGETGPRGEQGLPGERGLRGEPGSLV 1934
Score = 121 (47.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 46/119 (38%), Positives = 58/119 (48%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGPGDKEERGPGDKEKRGP 121
P + RGP GD +RGP KE GP G ERGP GDR GP G++ GP
Sbjct: 1966 PTPERRRGPKGDPGERGPPGKE--GPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGP 2023
Query: 122 -GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG----PGDKEERAPGG 171
G + G PG GP G E G PG++ ERG+ G++ ++G PG P G
Sbjct: 2024 TGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGLPGLPGPPGPPG 2082
Score = 119 (46.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 42/108 (38%), Positives = 56/108 (51%)
Query: 73 PGDKEKRGP-GDKEERGPGDKEERGP-GDREKRGP-GDKEERGPGDKEKRGPGDKEKRGP 129
P + +RGP GD ERGP KE GP G +RGP GD+ + GP G++ GP
Sbjct: 1966 PTPERRRGPKGDPGERGPPGKE--GPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPGP 2023
Query: 130 -GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGGL 172
G E G PG GP G E G+ G++ +RG G++ E+ GL
Sbjct: 2024 TGLAGEPGKPGIPGLPGPAGSVGEAGRPGERGERGEKGERGEQGRDGL 2071
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/116 (37%), Positives = 57/116 (49%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG 120
G+K + GP GD PG ERG G RGP G++ +G PG++ G PG +G
Sbjct: 1631 GEKGDDGPPGDPGL--PGKAGERGLRGAPGARGPVGEKGDQGDPGEEGRNGSPGPSGPKG 1688
Query: 121 P-GDKEKRG-PGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
G+ G PG + G G E+ PGD+ + G +G K GP G ER GL
Sbjct: 1689 DRGEPGPPGAPGRLVDVGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGL 1744
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 49/120 (40%), Positives = 60/120 (50%)
Query: 66 GDKEERGP-GDKEKRGP-GDKE---ERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD RGP G + GP GD E+G PG GP G R + G G+K + GP GD
Sbjct: 1583 GDPGGRGPIGLTGRAGPPGDSGPPGEKGDPGRPGSPGPVGPRGRDGEVGEKGDDGPPGDP 1642
Query: 117 EKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
G G++ RG PG RGP G+K ++G PG EE G GP GD+ E P G
Sbjct: 1643 GLPGKAGERGLRGAPG---ARGPVGEKGDQGDPG--EEGRNGSPGPSGPKGDRGEPGPPG 1697
Score = 112 (44.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 48/129 (37%), Positives = 59/129 (45%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP--GDKEERGPGDREKRGP-GDKEERGP-GDKEK 118
PG RG PG++ RGP G+ E G G + PG + GP G RGP GD
Sbjct: 1326 PGWAGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGQKGDPGPPGPPGSRGPLGDPGP 1385
Query: 119 RGP----GDKEKRGPGDKEERGP---GDKE----ERG----PGDKEERGQ-GDKEKRGP- 161
RGP G K GD+ E+GP GD E G PG +G G ++G
Sbjct: 1386 RGPPGFPGTAVKGEKGDRGEQGPPGPGDGTAALGEPGLPGLPGSPGPQGSVGPPGEKGEK 1445
Query: 162 GDKEERAPG 170
GD E+ APG
Sbjct: 1446 GDCEDGAPG 1454
Score = 110 (43.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 48/120 (40%), Positives = 57/120 (47%)
Query: 66 GDKEERGP----GDKEKRG----PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPG 114
GDK E GP G +RG PG + G PG + GP GDR G PG K ++G
Sbjct: 2632 GDKGEAGPPGRPGLAGRRGELGEPGVPGQAGAPGKEGLIGPKGDRGFDGQPGPKGDQG-- 2689
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
+K +RGP G GP G GP G GP E QG K +RGP G+ APG
Sbjct: 2690 EKGERGPPGVGGFPGPRGSDGSSGPPGPPGSIGPKGPEGL-QGQKGERGPPGESVVGAPG 2748
Score = 110 (43.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 49/126 (38%), Positives = 58/126 (46%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEKRG 120
G+K E PGD+ + GP G K + GP G ERG G R GP GD RGP G+K RG
Sbjct: 1710 GEKGE--PGDRGQEGPRGPKGDPGPPGASGERGVSGLRGPPGPQGDPGVRGPAGEKGDRG 1767
Query: 121 PGDKEKRG-----PGDKEERGP-------GDKEERG-PGDKEERGQ-GDKEKRG-PGDK- 164
P + R PG GP GD G PG + E+G G G PG
Sbjct: 1768 PPGLDGRSGLDGKPGASGPPGPNGAMGKAGDPGRDGLPGLRGEQGPPGPAGPPGAPGKPG 1827
Query: 165 EERAPG 170
E+ PG
Sbjct: 1828 EDGKPG 1833
Score = 107 (42.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 46/115 (40%), Positives = 53/115 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG + GP GD+ G PG K ++G +K ERGP G GP G GP G
Sbjct: 2664 PGKEGLIGPKGDRGFDGQPGPKGDQG--EKGERGPPGVGGFPGPRGSDGSSGPPGPPGSI 2721
Query: 120 GPGDKEKRGPGDKEERGPGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
GP E G K ERGP + G PG ERG QG GP G+K E A
Sbjct: 2722 GPKGPEGL-QGQKGERGPPGESVVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2775
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/113 (38%), Positives = 53/113 (46%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGPG 122
G+K ERG PG +G PG GP + E PG +RG +K E G PGD GPG
Sbjct: 1487 GEKGERGSPGPVGPQGLPGVAGRPGP-EGPEGPPGPTGRRG--EKGEPGRPGDPAV-GPG 1542
Query: 123 DKEKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGGL 172
+G +K + GP G K G G++ G GP GD R P GL
Sbjct: 1543 GAGAKG--EKGDMGPPGPKGATGFKGEQGSPGLALPGDPGPKGDPGGRGPIGL 1593
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 40/107 (37%), Positives = 49/107 (45%)
Query: 73 PGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG-PGDKEKRG 128
PG GP + GD G PG R ++GP G G PG + G PG K G
Sbjct: 1781 PGASGPPGPNGAMGKA-GDPGRDGLPGLRGEQGPPGPAGPPGAPGKPGEDGKPGLNGKNG 1839
Query: 129 -PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGGL 172
PGD E G G+K + G +E R G K +RG PG + P GL
Sbjct: 1840 EPGDPGEDGRKGEKGDSGAPGREGR-DGPKGERGAPGSPGLQGPPGL 1885
Score = 101 (40.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 43/113 (38%), Positives = 50/113 (44%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDK--EKRG 120
GD+ G PG GP G K E GP PG PG K E+G PG + G
Sbjct: 2260 GDRGAPGVPGSPGLPGPVGPKGEPGPMGT----PGQAVVGPPGAKGEKGAPGALAGDLVG 2315
Query: 121 -PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERA-PG 170
PG K RG PG + E+G + PGD E GQ K PG K + PG
Sbjct: 2316 EPGAKGDRGLPGPRGEKGEAGRAGE-PGDPGEDGQ----KGAPGPKGHKGDPG 2363
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 47/120 (39%), Positives = 55/120 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG-PGDKEERGP--GDREKRGP-GDKEERGPGD 115
PG + RG PG + +RG GD G GDK + G RG GD ERGP
Sbjct: 2477 PGLEGPRGLAGPPGIRGERGEKGDAGASGLKGDKGDSAVILGPPGPRGAKGDSGERGP-- 2534
Query: 116 KEKRG-PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRGPGDKEERAPGGL 172
RG GDK RG D E PG+K +G PGDK G G + GP K E G+
Sbjct: 2535 ---RGIDGDKGPRG--DSGE--PGEKGTKGEPGDKGSAGLLGARGLMGP--KGEPGAAGI 2585
Score = 52 (23.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 5 RGERA--SDKEERG----PGDKEERG-PGDKKARG 32
RG R DK RG PG+K +G PGDK + G
Sbjct: 2532 RGPRGIDGDKGPRGDSGEPGEKGTKGEPGDKGSAG 2566
Score = 50 (22.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 5 RGERASDKEERGPGDKE-------ERGP-GDKKARGP 33
RG + D ERGP KE ERGP GD+ GP
Sbjct: 1972 RGPKG-DPGERGPPGKEGPIGFSGERGPKGDRGDPGP 2007
Score = 47 (21.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 12 KEERGP-GDKEERGPGDKKARGP 33
+ RGP GD ERGP K+ GP
Sbjct: 1969 ERRRGPKGDPGERGPPGKE--GP 1989
Score = 47 (21.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 2 QACRGERASDKEERGP-GDKEERGPGDKKARG 32
+ +G+ SD + RGP GD+ E PG K RG
Sbjct: 2104 KGAKGDPGSDGD-RGPKGDRGE--PGIKGDRG 2132
Score = 46 (21.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PGD+ + GP G K GP
Sbjct: 1711 EKGEPGDRGQEGPRGPKGDPGP 1732
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 15 RGP-GDKEERGP----GDKKARG 32
RG GD ERGP GDK RG
Sbjct: 2523 RGAKGDSGERGPRGIDGDKGPRG 2545
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 RASDKEERG-PGDKEERGPGDKKARG 32
R +K E G PGD GPG A+G
Sbjct: 1524 RRGEKGEPGRPGDPAV-GPGGAGAKG 1548
Score = 42 (19.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
RGE+ PGD E G K A GP
Sbjct: 2329 RGEKGEAGRAGEPGDPGE--DGQKGAPGP 2355
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 16 GPGDKEERGPGDKKARGP 33
G G+K E PGD+ GP
Sbjct: 1708 GAGEKGE--PGDRGQEGP 1723
Score = 40 (19.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ D ++ PG K +G +GP
Sbjct: 2342 GDPGEDGQKGAPGPKGHKGDPGVGVQGP 2369
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
RGE E+ PG++ RG PG
Sbjct: 1909 RGETGPRGEQGLPGERGLRGEPG 1931
Score = 38 (18.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARG 32
G S E PG++ ERG +K RG
Sbjct: 2040 GPAGSVGEAGRPGERGERG--EKGERG 2064
Score = 35 (17.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 18 GDKEERGPGDKKARG 32
GDK + G G ARG
Sbjct: 2449 GDKGDTGAGLPGARG 2463
Score = 34 (17.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 17 PGDKEERGPGDKKARG 32
PG+K E+G + A G
Sbjct: 1439 PGEKGEKGDCEDGAPG 1454
>MGI|MGI:88459 [details] [associations]
symbol:Col6a1 "collagen, type VI, alpha 1" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=ISO]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043234 "protein
complex" evidence=ISO] [GO:0048407 "platelet-derived growth factor
binding" evidence=ISO] [GO:0070208 "protein heterotrimerization"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 MGI:MGI:88459 GO:GO:0005576
GO:GO:0043234 GO:GO:0007155 GO:GO:0042383 GO:GO:0005581
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 CTD:1291 eggNOG:NOG256042 HOGENOM:HOG000111863
HOVERGEN:HBG095954 KO:K06238 OrthoDB:EOG4WWRHX OMA:VKENYAE
EMBL:X66405 EMBL:X66406 EMBL:Z18271 IPI:IPI00339885 PIR:S34839
RefSeq:NP_034063.1 UniGene:Mm.2509 ProteinModelPortal:Q04857
SMR:Q04857 STRING:Q04857 PhosphoSite:Q04857 PaxDb:Q04857
PRIDE:Q04857 Ensembl:ENSMUST00000001147 GeneID:12833 KEGG:mmu:12833
UCSC:uc007fux.1 GeneTree:ENSGT00530000063022 InParanoid:Q04857
NextBio:282342 Bgee:Q04857 CleanEx:MM_COL6A1 Genevestigator:Q04857
GermOnline:ENSMUSG00000001119 Uniprot:Q04857
Length = 1025
Score = 135 (52.6 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 48/121 (39%), Positives = 59/121 (48%)
Query: 65 PGDKEERGP-GDKEKRGPG--DKEERGPGDKEERGPGDREKRG-PGDKEERGP-GDKEKR 119
PG K + G G K ++G D E PG+ PGD G PG E+G GD+
Sbjct: 357 PGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGS--PGDEGDPGEPGPPGEKGEAGDEGNA 414
Query: 120 GPGDK--EKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP----GDKEERAPG 170
GP E+ GPG++ RG PG RGP GD E G QGD+ + GP GD E P
Sbjct: 415 GPDGAPGERGGPGERGPRGTPG---VRGPRGDPGEAGPQGDQGREGPVGIPGDSGEAGPI 471
Query: 171 G 171
G
Sbjct: 472 G 472
Score = 109 (43.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 51/137 (37%), Positives = 64/137 (46%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERGP----GDREKRG----PGDKEE 110
PG+K E G PG GP G K E+G G+K RGP G++ KRG G K E
Sbjct: 276 PGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGE 335
Query: 111 RG-PGDKEKRG-PGDKEKRGP-GDKEERGP----GDKEERG-------PGDKEERG-QGD 155
G PG +G PG +GP G K + G G+K E G PG+ G +GD
Sbjct: 336 TGYPGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSPGDEGD 395
Query: 156 KEKRGP-GDKEERAPGG 171
+ GP G+K E G
Sbjct: 396 PGEPGPPGEKGEAGDEG 412
Score = 45 (20.9 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 QACRGERAS--DKEERGP-GDKEERG 24
Q +GE+ S +K RGP G K E+G
Sbjct: 297 QGMKGEKGSRGEKGSRGPKGYKGEKG 322
>UNIPROTKB|Q1JQB0 [details] [associations]
symbol:COL6A2 "Collagen, type VI, alpha 2" species:9913
"Bos taurus" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG256042
HOGENOM:HOG000111863 KO:K06238 GeneTree:ENSGT00530000063022
CTD:1292 HOVERGEN:HBG051051 OMA:RALCNHD EMBL:DAAA02003505
EMBL:DAAA02003506 EMBL:BC116097 IPI:IPI00695377
RefSeq:NP_001068594.1 UniGene:Bt.41907 STRING:Q1JQB0
Ensembl:ENSBTAT00000043412 GeneID:282194 KEGG:bta:282194
NextBio:20806019 Uniprot:Q1JQB0
Length = 917
Score = 131 (51.2 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 46/109 (42%), Positives = 55/109 (50%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERG---PGDREKRGPGDKEERGPGDKEKR 119
PG + RG PGD RG D + GP GD G PG R PGDK E GP E
Sbjct: 482 PGKQGSRGDPGDAGPRG--DSGQPGPKGDPGRPGFSYPGPRG--APGDKGEPGPPGPEG- 536
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GD 163
G GD +G PG K ++G P D G PG + +RG G + + GP GD
Sbjct: 537 GRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGQRGAPGPEGEPGPPGD 585
Score = 129 (50.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 46/115 (40%), Positives = 56/115 (48%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
G+ RG PG K G G K E+G PG + RG E G K +RG PG + +G
Sbjct: 420 GEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAG-EVGNKGAKGDRGLPGPRGPQGT 478
Query: 122 -GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PGDKEERAPGG 171
G+ K+G GD + GP GD + GP GD G RG PGDK E P G
Sbjct: 479 VGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGPPG 533
Score = 128 (50.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 46/117 (39%), Positives = 60/117 (51%)
Query: 66 GDKEERG-PGDKEKRG-------PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP- 113
G K E+G PG + RG G K +RG PG + +G G+ K+G GD + GP
Sbjct: 438 GPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGTVGEPGKQGSRGDPGDAGPR 497
Query: 114 GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEER 167
GD + GP GD + G RG PGDK E GP E G+GD +G PG K ++
Sbjct: 498 GDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGPPGPEG-GRGDFGSKGEPGRKGQK 553
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/119 (36%), Positives = 59/119 (49%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEKR 119
GD+ +G PG +RGP G+ +G G + G PG +G G RGP G+ +R
Sbjct: 366 GDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNNGAPGSPGLKGAKGGPGPRGPKGEPGRR 425
Query: 120 G-PGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPGGLV 173
G PG K G G K E+G PG + RG G+ +G +GD+ GP R P G V
Sbjct: 426 GDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGP-----RGPQGTV 479
Score = 47 (21.6 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GER + PG RGP G+ A+G
Sbjct: 363 GERGDQGSKGDPGRPGRRGPPGENGAKG 390
>ZFIN|ZDB-GENE-070822-11 [details] [associations]
symbol:zgc:171310 "zgc:171310" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070822-11 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:KOG0123 EMBL:BC133817
IPI:IPI00962866 UniGene:Dr.151544 Ensembl:ENSDART00000100879
GeneTree:ENSGT00460000042084 HOGENOM:HOG000170340
HOVERGEN:HBG099562 InParanoid:A3KNF8 Uniprot:A3KNF8
Length = 342
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/108 (37%), Positives = 55/108 (50%)
Query: 67 DKEERGPGDKEKRGP-GDKEERGPGDKEER-GPGDREKRGP-GDKEERGPGDKEKRGP-G 122
D + P E+R G+ EER ++ ER GD E+R G+ E GD E+R G
Sbjct: 189 DNDSSSPRQTEERETAGETEERKTSEETERKAAGDTEERKTSGETEREAAGDTEERKTSG 248
Query: 123 DKEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDK-EERA 168
+ E+ GD EER G+ E GD EER + +R P D+ +ERA
Sbjct: 249 ETEREAAGDTEERKTSGETEREAAGDTEERKTSGETEREPADETKERA 296
Score = 142 (55.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 40/105 (38%), Positives = 51/105 (48%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGP-GDREKRGPGDKEER-GPGDKEKRGP-GDKEKRG 128
GP DK D + P EER G+ E+R ++ ER GD E+R G+ E+
Sbjct: 179 GP-DKTIEVLSDNDSSSPRQTEERETAGETEERKTSEETERKAAGDTEERKTSGETEREA 237
Query: 129 PGDKEERGP-GDKEERGPGDKEERG-QGDKEKRGPGDKEERAPGG 171
GD EER G+ E GD EER G+ E+ GD EER G
Sbjct: 238 AGDTEERKTSGETEREAAGDTEERKTSGETEREAAGDTEERKTSG 282
Score = 138 (53.6 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 66 GDKEERGPGDK-EKRGPGDKEERGP-GDKEERGPGDREKRGP-GDKEERGPGDKEKRGP- 121
G+ EER ++ E++ GD EER G+ E GD E+R G+ E GD E+R
Sbjct: 205 GETEERKTSEETERKAAGDTEERKTSGETEREAAGDTEERKTSGETEREAAGDTEERKTS 264
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDK-EERGQGD 155
G+ E+ GD EER + ER P D+ +ER +
Sbjct: 265 GETEREAAGDTEERKTSGETEREPADETKERANSE 299
Score = 104 (41.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGPGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPGD 123
G+ E GD E+R G+ E GD EER G+ E+ GD EER + +R P D
Sbjct: 231 GETEREAAGDTEERKTSGETEREAAGDTEERKTSGETEREAAGDTEERKTSGETEREPAD 290
Query: 124 KEKRGPGDKEERG 136
+ K + G
Sbjct: 291 ETKERANSESSWG 303
>UNIPROTKB|F1S9I0 [details] [associations]
symbol:MIA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042060 "wound healing" evidence=IEA] [GO:0030336
"negative regulation of cell migration" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007162 "negative regulation of cell
adhesion" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0002687 "positive regulation of leukocyte migration"
evidence=IEA] InterPro:IPR001452 SMART:SM00326 GO:GO:0016021
GO:GO:0005789 GO:GO:0015031 GO:GO:0002687 GO:GO:0030336
SUPFAM:SSF50044 GO:GO:0006887 GO:GO:0007162 GO:GO:0042060
InterPro:IPR011511 Pfam:PF07653 OMA:VALTHKD
GeneTree:ENSGT00530000063635 EMBL:CU915511 EMBL:CU929023
Ensembl:ENSSSCT00000011852 Uniprot:F1S9I0
Length = 1895
Score = 147 (56.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 69 EERGPGDKEKRGPGDKEERGPGDKEER--GPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
EE PG E+ PG EE PG EE GP + GP ++ GP ++ GP ++
Sbjct: 1042 EEGRPGPAEEGRPGPAEEGRPGPAEESLAGPAEESSAGPAEESSAGPAEESLAGPAEESS 1101
Query: 127 RGPGDKEERGPGDKEERGPGDKE 149
GP ++ GP ++ GP + E
Sbjct: 1102 AGPAEESLAGPAEESSAGPAEGE 1124
Score = 141 (54.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 65 PGDKEERGPGDKEKRGPGDKEER--GPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
PG EE PG E+ PG EE GP ++ GP + GP ++ GP ++ GP
Sbjct: 1046 PGPAEEGRPGPAEEGRPGPAEESLAGPAEESSAGPAEESSAGPAEESLAGPAEESSAGPA 1105
Query: 123 DKEKRGPGDKEERGPGDKE 141
++ GP ++ GP + E
Sbjct: 1106 EESLAGPAEESSAGPAEGE 1124
Score = 139 (54.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 85 EERGPGDKEERGPGDREKRGPGDKEER--GPGDKEKRGPGDKEKRGPGDKEERGPGDKEE 142
EE PG EE PG E+ PG EE GP ++ GP ++ GP ++ GP ++
Sbjct: 1042 EEGRPGPAEEGRPGPAEEGRPGPAEESLAGPAEESSAGPAEESSAGPAEESLAGPAEESS 1101
Query: 143 RGPGDKEERGQGDKEKRGPGDKE 165
GP ++ G ++ GP + E
Sbjct: 1102 AGPAEESLAGPAEESSAGPAEGE 1124
Score = 139 (54.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 21/85 (24%), Positives = 42/85 (49%)
Query: 73 PGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDK 132
P ++ + GP ++ GP ++ GP + GP ++ GP ++ GP ++ GP ++
Sbjct: 1040 PAEEGRPGPAEEGRPGPAEEGRPGPAEESLAGPAEESSAGPAEESSAGPAEESLAGPAEE 1099
Query: 133 EERGPGDKEERGPGDKEERGQGDKE 157
GP ++ GP ++ G + E
Sbjct: 1100 SSAGPAEESLAGPAEESSAGPAEGE 1124
Score = 128 (50.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 89 PGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDK 148
P ++ GP + + GP ++ GP ++ GP ++ GP ++ GP ++ GP ++
Sbjct: 1040 PAEEGRPGPAEEGRPGPAEEGRPGPAEESLAGPAEESSAGPAEESSAGPAEESLAGPAEE 1099
Query: 149 EERGQGDKEKRGPGDKEERAP 169
G ++ GP ++ P
Sbjct: 1100 SSAGPAEESLAGPAEESSAGP 1120
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 7 ERASDKEERGPGDKEERGPGDKKA 30
E A D E GP + E ++A
Sbjct: 675 EAAEDALEEGPAHRREPAAAPREA 698
>ZFIN|ZDB-GENE-070501-6 [details] [associations]
symbol:col6a1 "collagen, type VI, alpha 1"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 ZFIN:ZDB-GENE-070501-6
InterPro:IPR008160 Pfam:PF01391 GO:GO:0007519
GeneTree:ENSGT00530000063022 EMBL:CR925698 IPI:IPI00510185
Ensembl:ENSDART00000110608 Uniprot:F1Q6P3
Length = 1010
Score = 133 (51.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/115 (42%), Positives = 59/115 (51%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERG-PG-DREKRGPGDKEERGP-GDKEKR 119
PG K GP G + + GP GD + G K ERG PG D E PG+ G GD+ R
Sbjct: 338 PGCKGSPGPDGLQGESGPKGDPGQYGR--KGERGDPGRDGEPGRPGNYGPSGAKGDRGPR 395
Query: 120 GP-GDKEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGG 171
G GDK +RG D GP G + ERG G E+ QG + RGP G+ E P G
Sbjct: 396 GANGDKGERG--DDGPPGPDGPRGERGQGG-EKGEQGSRGNRGPRGEPGEPGPRG 447
Score = 132 (51.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 48/122 (39%), Positives = 64/122 (52%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGPG-DKEERGP-GDREKRG----PGDKEERG-PGDKE 117
GDK ERG D GP G + ERG G +K E+G G+R RG PG + E+G G
Sbjct: 399 GDKGERG--DDGPPGPDGPRGERGQGGEKGEQGSRGNRGPRGEPGEPGPRGEQGREGSSG 456
Query: 118 KRG-PGDKEKRG-PGDKEERGP----GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERA 168
G PG++ + G PG + + GP GDK RG G +RG G++ + GP G+ E
Sbjct: 457 ANGEPGEQGRAGQPGYRGDEGPAGPEGDKGPRGIKGAPGDRGLMGERGEDGPPGNGTEGC 516
Query: 169 PG 170
G
Sbjct: 517 AG 518
Score = 132 (51.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/130 (40%), Positives = 62/130 (47%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGP-GDKEERGPGDKEK 118
GD G PG GP G K +RGP GDK ERG D GP G + ERG G EK
Sbjct: 369 GDPGRDGEPGRPGNYGPSGAKGDRGPRGANGDKGERG--DDGPPGPDGPRGERGQGG-EK 425
Query: 119 RGPGDKEKRGP-GDKEERGP-GDKEERG-------PGDKEERGQ----GDKEKRGP-GDK 164
G + RGP G+ E GP G++ G PG++ GQ GD+ GP GDK
Sbjct: 426 GEQGSRGNRGPRGEPGEPGPRGEQGREGSSGANGEPGEQGRAGQPGYRGDEGPAGPEGDK 485
Query: 165 EER----APG 170
R APG
Sbjct: 486 GPRGIKGAPG 495
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 54/133 (40%), Positives = 63/133 (47%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRG----PGDKEERG-- 112
GD +G PGD G G K ++G GDK ERG GD+ G G K E G
Sbjct: 276 GDFGAQGNPGDPGPVGYQGMKGDQGIKGDKGERGHKGFKGDKGHHGLDGTDGRKGEPGFP 335
Query: 113 --PGDKEKRGP-GDKEKRGP-GD------KEERG-PGDKEERG-PGDKEERG-QGDKEKR 159
PG K GP G + + GP GD K ERG PG E G PG+ G +GD+ R
Sbjct: 336 GLPGCKGSPGPDGLQGESGPKGDPGQYGRKGERGDPGRDGEPGRPGNYGPSGAKGDRGPR 395
Query: 160 GP-GDKEERAPGG 171
G GDK ER G
Sbjct: 396 GANGDKGERGDDG 408
Score = 46 (21.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GER + PG GP G K RGP
Sbjct: 365 KGERGDPGRDGEPGRPGNYGPSGAKGDRGP 394
>RGD|1595704 [details] [associations]
symbol:Col13a1 "collagen, type XIII, alpha 1" species:10116
"Rattus norvegicus" [GO:0005911 "cell-cell junction" evidence=ISO]
[GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0008201
"heparin binding" evidence=ISO] [GO:0016337 "cell-cell adhesion"
evidence=ISO] RGD:1595704 GO:GO:0008201 GO:GO:0005911 GO:GO:0016337
GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391 GO:GO:0001958
OrthoDB:EOG4894NC GO:GO:0001763 IPI:IPI00948506
Ensembl:ENSRNOT00000040620 UCSC:RGD:1595704 ArrayExpress:D3ZU23
Uniprot:D3ZU23
Length = 751
Score = 120 (47.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 49/122 (40%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDREKRG-PGDKEERGP-GD 115
PG +G PG K + G G K E+G G+K +RGP G G PG GP G
Sbjct: 610 PGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 669
Query: 116 KEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERA 168
GP G++ +G PG G G G PGDK RG+ G K RGP GDK ++ A
Sbjct: 670 PGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 729
Query: 169 PG 170
PG
Sbjct: 730 PG 731
Score = 112 (44.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGP----GDKEERGPGDKEK 118
PG+K E G G GP G+K E PGD E PG GP G E+G EK
Sbjct: 539 PGEKGETGQAGPPGLDGPTGEKGE--PGD--EGRPGATGLPGPIGLPGFTGEKGEAG-EK 593
Query: 119 RGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDK-EKRGPGDKEERAPGGL 172
PG + PG E PG +G PG K E G G K EK G+K +R P GL
Sbjct: 594 GDPGAEVPGPPGP--EGPPGPPGLQGIPGPKGEAGLDGSKGEKGSQGEKGDRGPLGL 648
Score = 90 (36.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 47/128 (36%), Positives = 56/128 (43%)
Query: 66 GDKEERG-PGDKEKRG----PGD-----KEERG-PGDKEERGP-GDREKRGP-GDKEERG 112
G K ERG PG K G PG K E G PG K E+G G G G+K + G
Sbjct: 322 GRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAG 381
Query: 113 PGDKEKRG-PGDKEKRGP-GDKEERGPGDKEERGPGDKEERGQ----GDKEKRGP-GDKE 165
RG PG GP G K E G D + PG + ++GQ G+ GP G K
Sbjct: 382 NAIGGGRGEPGPPGLPGPPGPKGEAGV-DGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKG 440
Query: 166 ERAPGGLV 173
E G +V
Sbjct: 441 EPGKGEMV 448
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 1 MQACRGERASDKEERGPGDKEERGPG 26
M A R +A+ RGPGD GPG
Sbjct: 1 MVAERARKAAASSNRGPGDLGAPGPG 26
Score = 42 (19.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE D + PG + ++G PG GP
Sbjct: 403 KGEAGVDGQAGPPGQQGDKGQPGAAGEPGP 432
Score = 41 (19.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 23 RGPGDKKARGP 33
RGPGD A GP
Sbjct: 15 RGPGDLGAPGP 25
Score = 38 (18.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE+ E+ PG + PG + GP
Sbjct: 585 GEKGEAGEKGDPGAEVPGPPGPEGPPGP 612
>UNIPROTKB|F1MKG2 [details] [associations]
symbol:COL6A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070208 "protein heterotrimerization" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
GO:GO:0005615 GO:GO:0043234 GO:GO:0042383 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GeneTree:ENSGT00530000063022 EMBL:DAAA02003505 EMBL:DAAA02003506
IPI:IPI00837992 Ensembl:ENSBTAT00000025663 ArrayExpress:F1MKG2
Uniprot:F1MKG2
Length = 1027
Score = 131 (51.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/109 (42%), Positives = 55/109 (50%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERG---PGDREKRGPGDKEERGPGDKEKR 119
PG + RG PGD RG D + GP GD G PG R PGDK E GP E
Sbjct: 491 PGKQGSRGDPGDAGPRG--DSGQPGPKGDPGRPGFSYPGPRG--APGDKGEPGPPGPEG- 545
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GD 163
G GD +G PG K ++G P D G PG + +RG G + + GP GD
Sbjct: 546 GRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGQRGAPGPEGEPGPPGD 594
Score = 129 (50.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/115 (40%), Positives = 56/115 (48%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
G+ RG PG K G G K E+G PG + RG E G K +RG PG + +G
Sbjct: 429 GEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAG-EVGNKGAKGDRGLPGPRGPQGT 487
Query: 122 -GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PGDKEERAPGG 171
G+ K+G GD + GP GD + GP GD G RG PGDK E P G
Sbjct: 488 VGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGPPG 542
Score = 128 (50.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 46/117 (39%), Positives = 60/117 (51%)
Query: 66 GDKEERG-PGDKEKRG-------PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP- 113
G K E+G PG + RG G K +RG PG + +G G+ K+G GD + GP
Sbjct: 447 GPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGTVGEPGKQGSRGDPGDAGPR 506
Query: 114 GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEER 167
GD + GP GD + G RG PGDK E GP E G+GD +G PG K ++
Sbjct: 507 GDSGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGPPGPEG-GRGDFGSKGEPGRKGQK 562
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/119 (36%), Positives = 59/119 (49%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEKR 119
GD+ +G PG +RGP G+ +G G + G PG +G G RGP G+ +R
Sbjct: 375 GDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNNGAPGSPGLKGAKGGPGPRGPKGEPGRR 434
Query: 120 G-PGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPGGLV 173
G PG K G G K E+G PG + RG G+ +G +GD+ GP R P G V
Sbjct: 435 GDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGP-----RGPQGTV 488
Score = 47 (21.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GER + PG RGP G+ A+G
Sbjct: 372 GERGDQGSKGDPGRPGRRGPPGENGAKG 399
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 120 (47.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 36/104 (34%), Positives = 58/104 (55%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKR-GPGDKE 125
++EE D+E + +K E G DK+E+G D ++ G+ E+G KEK G ++
Sbjct: 125 NEEEDQKEDEEDQNE-EKGEAGKEDKDEKGEEDGKEDKNGN--EKGEDAKEKEDGKKGED 181
Query: 126 KRGPG-DKEERGPGDKEERGPGDKEERGQGDKEKRGP--GDKEE 166
+G G D +E+G +KEE D++E G G + + G GDK+E
Sbjct: 182 GKGNGEDGKEKGEDEKEEE---DRKETGDGKENEDGKEKGDKKE 222
Score = 118 (46.6 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPG---DKEKRGPGD 123
+K E G DK+++G D +E G+ E+G +EK G K E G G D +++G +
Sbjct: 140 EKGEAGKEDKDEKGEEDGKEDKNGN--EKGEDAKEKED-GKKGEDGKGNGEDGKEKGEDE 196
Query: 124 KEKRGPGDKEERGPGDKEERGP--GDKEERGQGDKEKRGPGDKEERAPG 170
KE+ D++E G G + E G GDK+E G+ K K D++ER G
Sbjct: 197 KEEE---DRKETGDGKENEDGKEKGDKKE-GKDVKVKE---DEKEREDG 238
Score = 117 (46.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 41/105 (39%), Positives = 57/105 (54%)
Query: 67 DKEERGPGDKEKRGPG---DKEERGPGDKEERGPGDREKRGPGDKEERGP--GDKEKRGP 121
D +E+ G K + G G D +E+G +KEE DR++ G G + E G GDK K G
Sbjct: 169 DAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEE---DRKETGDGKENEDGKEKGDK-KEGK 224
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
K K D++ER G KE+ G G++EE G KEK ++EE
Sbjct: 225 DVKVKE---DEKEREDG-KEDEG-GNEEEAG---KEKEDLKEEEE 261
Score = 114 (45.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 40/114 (35%), Positives = 65/114 (57%)
Query: 67 DKEERGP--GDKEKRG--PG-DKEERGPGDKEERGPG---DREKRGPGDKEERGPGDKEK 118
DK+E+G G ++K G G D +E+ G K E G G D +++G +KEE D+++
Sbjct: 148 DKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEE---DRKE 204
Query: 119 RGPGDKEKRGP--GDKEE----RGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G G + + G GDK+E + D++ER G KE+ G G++E+ G +KE+
Sbjct: 205 TGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDG-KEDEG-GNEEEAGK-EKED 255
Score = 106 (42.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGP--GDREKRGPGDKEERGPGDKEKRGPGDK 124
D +E+G +KE+ D++E G G + E G GD+ K G K+ + D+++R G K
Sbjct: 188 DGKEKGEDEKEEE---DRKETGDGKENEDGKEKGDK-KEG---KDVKVKEDEKEREDG-K 239
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
E G G++EE G KE+ ++EE + D+ K G KEE
Sbjct: 240 EDEG-GNEEEAG---KEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 103 (41.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREK--RGPGDKEERGPGDKEKRGPGDK 124
D E+G G+K++ + + KE+ + EK G DK+E+G E+ G DK
Sbjct: 107 DATEKG-GEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKG----EEDGKEDK 161
Query: 125 EKRGPG-DKEERGPGDKEERGPG---DKEERGQGDKE---KRGPGDKEERAPG 170
G D +E+ G K E G G D +E+G+ +KE ++ GD +E G
Sbjct: 162 NGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDG 214
Score = 45 (20.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
++ +K E G DK+E+G D K
Sbjct: 136 DQNEEKGEAGKEDKDEKGEEDGK 158
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 5 RGERAS-DKEERGPGDKEERGPGDKK 29
+GE DK+E+G D +E G++K
Sbjct: 141 KGEAGKEDKDEKGEEDGKEDKNGNEK 166
Score = 42 (19.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 7 ERASDKEERGPGDKEERGPG---DKKARG 32
E+ D +E+ G K E G G D K +G
Sbjct: 165 EKGEDAKEKEDGKKGEDGKGNGEDGKEKG 193
>UNIPROTKB|F1SNP1 [details] [associations]
symbol:COL4A4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032836 "glomerular basement membrane development"
evidence=IEA] [GO:0005605 "basal lamina" evidence=IEA] [GO:0005587
"collagen type IV" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] InterPro:IPR001442
Pfam:PF01413 PROSITE:PS51403 SMART:SM00111 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0005605 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 GO:GO:0032836 OMA:FRGDMGD
EMBL:CU466451 EMBL:FP690341 Ensembl:ENSSSCT00000017688
Uniprot:F1SNP1
Length = 1711
Score = 120 (47.3 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 44/115 (38%), Positives = 50/115 (43%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKR 119
PG +G GD G PG+K GP G K GP G GP G K E+G +
Sbjct: 460 PGLPGRQGSKGDLGLPGWPGEKGYLGPSGAKGSPGPTGKPGASGPPGSKGEKGDMVVSRV 519
Query: 120 GPGDKEKRGP-GDKEERGPGDKEERGP-GDKEERGQGDKEKRG-PGDKEERAPGG 171
G+K GP GD E+ PGDK GP G G G PG ER P G
Sbjct: 520 KAGEKGDPGPPGDHEDAAPGDKGPPGPPGSPGRAGPRGPPGLGFPGPPGERGPPG 574
Score = 117 (46.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 48/122 (39%), Positives = 57/122 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGPGDR---EKRGPGDKEERGP----GDK 116
PG ERGP PG +RGP G K ++GPG R K PG + GP G K
Sbjct: 564 PGPPGERGPPG----APGCPGQRGPDGRKGQKGPGPRCLGPKGFPGRRGTPGPRCLDGQK 619
Query: 117 EKRG-PGDKEKRGP-GDKEERG-PGDKEERG--P-GDKEERGQ-GDKEKRGP-GDKEERA 168
+RG PG E GP G + + G PG E+G P G G G +RGP GD
Sbjct: 620 GQRGQPGTSEIPGPPGFRGDTGDPGFGGEKGSSPIGPPGSPGSPGMNGQRGPPGDPALGY 679
Query: 169 PG 170
PG
Sbjct: 680 PG 681
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 41/118 (34%), Positives = 47/118 (39%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERG----PGDKEERG----PGDREKRG-PGDKEERGPG 114
PG +RGP GD PG +RG PG K RG PG G PG +GP
Sbjct: 663 PGMNGQRGPPGDPALGYPGPPGKRGLFGSPGSKGLRGDPGRPGATGPAGMPGFPGLKGPK 722
Query: 115 DKEKRGPGDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+E R PG E G PG PG G K +R PG K +R G
Sbjct: 723 GREGRAGFPGVPGPPGHSCESGAPG--RPGPPGLPGAPGSPGKCQRAPGWKGQRGDMG 778
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 45/123 (36%), Positives = 53/123 (43%)
Query: 65 PGDKEERG-PGDKEKRGP---GDKEERG-PGDKEERG--P-GDREKRG-PGDKEERGP-G 114
PG +G PG + GP G + + G PG E+G P G G PG +RGP G
Sbjct: 1265 PGAPGPKGFPGRRGTPGPSLIGFRGDTGDPGFGGEKGSSPIGPPGSPGSPGMNGQRGPPG 1324
Query: 115 DKEKRGPGDKEKRG----PGDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEERA- 168
D PG KRG PG K RG PG GP G +GP +E RA
Sbjct: 1325 DPALGYPGPPGKRGLFGSPGSKGLRGDPGRPGATGPAGMP----GFPGLKGPKGREGRAG 1380
Query: 169 -PG 170
PG
Sbjct: 1381 FPG 1383
Score = 64 (27.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 8 RASDKEERGP-GDKEERGPGDKKARGP 33
+A +K + GP GD E+ PGDK GP
Sbjct: 520 KAGEKGDPGPPGDHEDAAPGDKGPPGP 546
Score = 48 (22.0 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 11 DKEERGPGDKEERGPGDKKAR-GP 33
D E+ PGDK GP R GP
Sbjct: 532 DHEDAAPGDKGPPGPPGSPGRAGP 555
Score = 37 (18.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 17 PGDKEERGPGDKKARG 32
PG K E G G K +G
Sbjct: 231 PGPKGESGIGTKGEKG 246
Score = 34 (17.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+G R GDK ++GP
Sbjct: 32 KGMRGDSGLPGAAGDKGDKGP 52
Score = 33 (16.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
++ +G+R PG + RGP
Sbjct: 126 IKGIQGDRGDPGPPGLPGTRGTRGP 150
>UNIPROTKB|A7YY40 [details] [associations]
symbol:COL13A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0001958 "endochondral ossification" evidence=IEA] [GO:0001763
"morphogenesis of a branching structure" evidence=IEA]
GO:GO:0008201 GO:GO:0005911 GO:GO:0016337 GO:GO:0007160
HOGENOM:HOG000085653 InterPro:IPR008160 Pfam:PF01391 GO:GO:0001958
HOVERGEN:HBG004933 CTD:1305 eggNOG:NOG254293 KO:K16617 OMA:TSPGCHC
GO:GO:0001763 GeneTree:ENSGT00530000063274 EMBL:DAAA02061837
EMBL:DAAA02061838 EMBL:BC150091 IPI:IPI00712102
RefSeq:NP_001098903.1 UniGene:Bt.19502 Ensembl:ENSBTAT00000039811
GeneID:613849 KEGG:bta:613849 NextBio:20898802 Uniprot:A7YY40
Length = 686
Score = 121 (47.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 49/120 (40%), Positives = 58/120 (48%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
PG GP G +G PG K E G G K ++G G++ RGP PG G
Sbjct: 548 PGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGDKGVQGEKGDRGPLGLPGT-PGPIGVPG 606
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERG----PGDKEERGQ-GDKEKRGP-GDK-EERAPG 170
P G K +RG GD GP G G PGDK RG+ G K RGP GDK ++ APG
Sbjct: 607 PAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPG 666
Score = 112 (44.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 48/119 (40%), Positives = 58/119 (48%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGPGDKEERGP-GDREKRG-PGDKEERG-PGDK 116
PG+K E+G PG GP G+K E PGD+ G G G PG E+G PG
Sbjct: 483 PGEKGEKGETGQPGPPGLDGPTGEKGE--PGDQGRPGATGLPGPIGLPGFIGEKGEPG-- 538
Query: 117 EKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGGL 172
EK PG + PG E PG +G PG K E G G K +G G+K +R P GL
Sbjct: 539 EKGDPGMEVPGPPGP--EGPPGPPGLQGVPGPKGEAGLDGAKGDKGVQGEKGDRGPLGL 595
Score = 106 (42.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 46/112 (41%), Positives = 51/112 (45%)
Query: 73 PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGPGDKE-----ERGP-GDKEKRG-PG 122
PG + G PGDK G PG +G PG EK PGD RGP G RG PG
Sbjct: 124 PGPAGRPGLPGDKGAIGMPGRVGGKGQPG--EKGAPGDAGMSIIGPRGPPGQPGTRGFPG 181
Query: 123 DKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
G K R PG K E GP G K E+GQ G+ RG G + P G
Sbjct: 182 FPGPIGLDGKPGR-PGPKGEMGPQGQKGEKGQCGEYPHRGEQGQAGIQGPPG 232
Score = 101 (40.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 45/116 (38%), Positives = 54/116 (46%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERG-PGDKEERG----PGDREKRGP-GDKEERGPGDKEK 118
G K ERG PG K G K E G PG K E+G PG G G+K + G +
Sbjct: 274 GRKGERGMPGMPGKHGT--KGEPGIPGAKGEKGAAGSPGPLGLLGQKGEKGDAGNSIEGG 331
Query: 119 RG-PGDKEKRGP-GDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGG 171
RG PG GP G K E G D + PG+ QGDK + GP G++ P G
Sbjct: 332 RGEPGLPGPPGPPGPKGEAG-ADGQPGPPGE-----QGDKGEPGPAGEQGPTGPKG 381
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 38/102 (37%), Positives = 49/102 (48%)
Query: 65 PGDKEERGPGDKEKRGP----GDKEERGP-GDKEERGPGDREKRGP----GDKEERGPGD 115
PG K E+G GP G K E+G G+ E G G+ GP G K E G D
Sbjct: 297 PGAKGEKGAAGSP--GPLGLLGQKGEKGDAGNSIEGGRGEPGLPGPPGPPGPKGEAG-AD 353
Query: 116 KEKRGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERGQGD 155
+ PG++ GDK E GP G++ GP G K E G+G+
Sbjct: 354 GQPGPPGEQ-----GDKGEPGPAGEQGPTGPKGSKGETGKGE 390
Score = 51 (23.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE +D + PG++ ++G PG +GP
Sbjct: 347 KGEAGADGQPGPPGEQGDKGEPGPAGEQGP 376
Score = 39 (18.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 17 PGDKEERGP-GDKKARG 32
PG K E GP G K +G
Sbjct: 195 PGPKGEMGPQGQKGEKG 211
Score = 39 (18.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 6 GERASDKEERGPGDKEERG----PGDKKARGP 33
G + D PG+K E+G PG GP
Sbjct: 472 GMKGEDGLPGSPGEKGEKGETGQPGPPGLDGP 503
Score = 38 (18.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE+ E+ PG + PG + GP
Sbjct: 532 GEKGEPGEKGDPGMEVPGPPGPEGPPGP 559
>RGD|1311417 [details] [associations]
symbol:Col7a1 "collagen, type VII, alpha 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060
SMART:SM00327 RGD:1311417 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008160 Pfam:PF01391 IPI:IPI00951759
Ensembl:ENSRNOT00000066518 UCSC:RGD:1311417 ArrayExpress:D3ZQ14
Uniprot:D3ZQ14
Length = 2585
Score = 132 (51.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 50/124 (40%), Positives = 61/124 (49%)
Query: 66 GDKEERG---PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRGP-GDKEERG-PG 114
GDK + G PG + +RG PG + E G PG + RG PG R +RG GD G G
Sbjct: 2446 GDKGDSGAGLPGPRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKG 2505
Query: 115 DKEKRG--PGDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA 168
DK G RG GD ERGP G ++GP + E G GDK +G PGDK
Sbjct: 2506 DKGDSAVIEGPAGPRGAKGDMGERGPRGIDGDQGP--RGESGDPGDKGSKGEPGDKGSAG 2563
Query: 169 PGGL 172
G+
Sbjct: 2564 STGV 2567
Score = 123 (48.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 47/122 (38%), Positives = 57/122 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-----GDKEERGPGDREKRG-PGDKEERGPGDK- 116
PG + G PG K GD+ ERGP G E+ PG G PG +GP +
Sbjct: 1380 PGPRGPPGLPGTSVKGDKGDRGERGPPGPGTGASEQGSPG---LPGLPGSPGPQGPPGRT 1436
Query: 117 -EKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGG 171
EK GD E GPG + G PG+ RG PG +G +G G PG+K ER P G
Sbjct: 1437 GEKGEKGDCEDGGPGLPGQPGVPGEPGLRGAPGVTGPKGDRGLTGTPGEPGEKGERGPPG 1496
Query: 172 LV 173
V
Sbjct: 1497 PV 1498
Score = 117 (46.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 44/116 (37%), Positives = 54/116 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGPGDKEERGP-GDKE 117
PG+ G PG GP GD+ E GP G + R+K PG + RGP GD
Sbjct: 1672 PGEDGRNGTPGPS---GPKGDRGEPGPPGLPGRLVDAALESRDKGEPGQEGPRGPKGDPG 1728
Query: 118 KRGPGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPG 170
PG +RG G + GP GD RGP GDK +RG + R D + APG
Sbjct: 1729 P--PGASGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGSPGLDGRNGLDGKPGAPG 1782
Score = 116 (45.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 47/116 (40%), Positives = 60/116 (51%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG-PGDKEKRG 120
PGD + PG K G PGD E G G+K + G RE GP G K ERG PG+ +G
Sbjct: 1823 PGDDGK--PGLNGKNGEPGDPGEDGRKGEKGDSGVPGRE--GPDGPKGERGAPGNPGLQG 1878
Query: 121 P-GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-PGGL 172
P G + GP + PG GP K +RG+ G K ++G PG++ R PG L
Sbjct: 1879 PPGLPGQVGPPG--QGFPGVPGVTGP--KGDRGETGSKGEQGLPGERGLRGEPGSL 1930
Score = 116 (45.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 48/121 (39%), Positives = 60/121 (49%)
Query: 66 GDKEERGP-GDKEKRGP-GDKE---ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDK 116
GD +RGP G + GP GD E+G PG GP G R + G G+K + G PG+
Sbjct: 1583 GDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGAPGEP 1642
Query: 117 EKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
G G++ RG PG RGP G+K G PG E+ G GP GD+ E P G
Sbjct: 1643 GLPGKAGERGLRGAPGP---RGPVGEKGNEGDPG--EDGRNGTPGPSGPKGDRGEPGPPG 1697
Query: 172 L 172
L
Sbjct: 1698 L 1698
Score = 114 (45.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 45/123 (36%), Positives = 57/123 (46%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERG-PGDREKRG-PGDKEERGP-GD 115
PG+K E G PG GP G+ E+G G E G PG +RG G RGP G+
Sbjct: 1606 PGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGAPGEPGLPGKAGERGLRGAPGPRGPVGE 1665
Query: 116 KEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRGPGDKEERA 168
K G PG+ + G PG GP GD+ E GP G + ++K PG + R
Sbjct: 1666 KGNEGDPGEDGRNGTPGPS---GPKGDRGEPGPPGLPGRLVDAALESRDKGEPGQEGPRG 1722
Query: 169 PGG 171
P G
Sbjct: 1723 PKG 1725
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/124 (38%), Positives = 58/124 (46%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDK---EERGPGDREKRGP----GDKEERG----P 113
G+K ERG ++ PG GP G K EE GPG ++GP G K E G P
Sbjct: 2055 GEKGERGEQGRDGH-PGLPGPPGPPGPKVAIEELGPGPAREQGPPGLKGAKGEPGSDGVP 2113
Query: 114 GDKEKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEER 167
G K RG PG K G PG + G PG ERG G + + G QG + GP G +
Sbjct: 2114 GPKGDRGVPGIKGDAGEPGKRGPDGNPGLPGERGVSGPEGKPGLQGPRGTPGPVGSHGDP 2173
Query: 168 APGG 171
P G
Sbjct: 2174 GPPG 2177
Score = 111 (44.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 53/134 (39%), Positives = 63/134 (47%)
Query: 66 GDKEERGPGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG----PGDKEERGP-GDKE 117
GD E+ GPG + G PG+ RG PG GP GDR G PG+K ERGP G
Sbjct: 1443 GDCEDGGPGLPGQPGVPGEPGLRGAPG---VTGPKGDRGLTGTPGEPGEKGERGPPGPVG 1499
Query: 118 KRG-------PGDKEKRGP-------GDKEERG-PGDKEERGPGDKEERGQ-GDKEKRGP 161
+G PG + GP G+K E G PGD GPG +G+ GD GP
Sbjct: 1500 PQGLPGAAGRPGVEGPEGPPGPPGRRGEKGEPGRPGDPA-LGPGGAGAKGEKGDAGLPGP 1558
Query: 162 ----GDK-EERAPG 170
G K E+ APG
Sbjct: 1559 RGASGIKGEQGAPG 1572
Score = 109 (43.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 44/115 (38%), Positives = 52/115 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG-PGDKEERG--PGDREKRGP-GDKEERGPGD 115
PG + RG PG + +RG GD G GDK + G RG GD ERGP
Sbjct: 2474 PGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDSAVIEGPAGPRGAKGDMGERGP-- 2531
Query: 116 KEKRG-PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRGPGDKEER 167
RG GD+ RG E PGDK +G PGDK G G + GP + R
Sbjct: 2532 ---RGIDGDQGPRG----ESGDPGDKGSKGEPGDKGSAGSTGVRGLTGPKARRAR 2579
Score = 108 (43.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 44/118 (37%), Positives = 54/118 (45%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDKEK 118
PG + E G PG +RG PG E PG GP PG +G GD
Sbjct: 2397 PGPRGETGQPGPVGERGLAGPPG--REGAPGPLGPPGPPG-SVGAPGASGFKGDKGDSGA 2453
Query: 119 RGPGDKEKRG-PGDKEERG-PGDKEERG----PGDKEERGQ-GDKEKRG-PGDKEERA 168
PG + +RG PG + E G PG + RG PG + ERG+ GD G GDK + A
Sbjct: 2454 GLPGPRGERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKGDPGAAGLKGDKGDSA 2511
Score = 106 (42.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/119 (39%), Positives = 57/119 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERG-PGDKEERG-PGDREKRG-PGDKEERGPGDKEKR 119
PG E G PG + G K+ ERG PG G PG +G PG PG
Sbjct: 2235 PGQVGETGKPGPPGRDGSSGKDGERGGPGVPGLPGLPGPVGPKGEPGPVG--APGQVVVG 2292
Query: 120 GPGDK-EKRGPGDKEER--G-PGDKEERG-PGDKEERGQ-GDKEKRG-PG-DKEERAPG 170
PG K EK PGD G PG K +RG PG + E+G+ G + G PG D ++ APG
Sbjct: 2293 PPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGHAGEPGDPGEDGQKGAPG 2351
Score = 106 (42.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 47/128 (36%), Positives = 57/128 (44%)
Query: 65 PGDK---EERGPGDKEKRGP----GDKEERG----PGDKEERG-PGDREKRG-PGDKEER 111
PG K EE GPG ++GP G K E G PG K +RG PG + G PG +
Sbjct: 2078 PGPKVAIEELGPGPAREQGPPGLKGAKGEPGSDGVPGPKGDRGVPGIKGDAGEPGKRGPD 2137
Query: 112 G-PGDKEKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP----GD 163
G PG +RG E + PG + RG PG G PG G G +GP G+
Sbjct: 2138 GNPGLPGERGVSGPEGK-PGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGE 2196
Query: 164 KEERAPGG 171
E P G
Sbjct: 2197 PGETGPPG 2204
Score = 104 (41.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 42/116 (36%), Positives = 56/116 (48%)
Query: 66 GDKEERGP----GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
G++ GP G+ K G PG G + R PG+R +RG +K ERG ++
Sbjct: 2013 GERGPPGPSGLAGEPGKPGIPGLPGRAGAAGEAGR-PGERGERG--EKGERGEQGRDGH- 2068
Query: 121 PGDKEKRGP-GDK---EERGPGDKEERGP-GDKEERGQGDKEKRGPGDKEERA-PG 170
PG GP G K EE GPG E+GP G K +G+ + PG K +R PG
Sbjct: 2069 PGLPGPPGPPGPKVAIEELGPGPAREQGPPGLKGAKGEPGSDGV-PGPKGDRGVPG 2123
Score = 104 (41.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 43/114 (37%), Positives = 51/114 (44%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGP 121
PG ERG G + GP GD RGP GDK +RG + R D + PG G
Sbjct: 1730 PGASGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGSPGLDGRNGLDGKPGAPGPPGLHGA 1789
Query: 122 ----GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEE 166
GD + G PG + E GP G G PG + G+ G K G PGD E
Sbjct: 1790 SGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKPGDDGKPGLNGKNGEPGDPGE 1843
Score = 99 (39.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/115 (38%), Positives = 53/115 (46%)
Query: 67 DKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKR--G- 120
D E GPG G PG +G PG PG PG K E+G PGD G
Sbjct: 2256 DGERGGPGVPGLPGLPGPVGPKGEPGPVG--APGQVVVGPPGAKGEKGAPGDLAGALLGE 2313
Query: 121 PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAPG 170
PG K RG PG + E+G G E G PG+ ++G G K +G PG + PG
Sbjct: 2314 PGAKGDRGLPGPRGEKGEAGHAGEPGDPGEDGQKGAPGLKGLKGEPGIGVQGPPG 2368
Score = 52 (23.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 13 EERGPGDKEERGP-GDKKARG 32
EE GPG E+GP G K A+G
Sbjct: 2085 EELGPGPAREQGPPGLKGAKG 2105
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+G+R PG+K ERGP
Sbjct: 1474 KGDRGLTGTPGEPGEKGERGP 1494
Score = 44 (20.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 PGDK---EERGPGDKKARGP 33
PG K EE GPG + +GP
Sbjct: 2078 PGPKVAIEELGPGPAREQGP 2097
Score = 44 (20.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
RGE S E+ PG++ RG PG
Sbjct: 1906 RGETGSKGEQGLPGERGLRGEPG 1928
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 RASDKEERG-PGDKEERGPGDKKARG 32
R +K E G PGD GPG A+G
Sbjct: 1524 RRGEKGEPGRPGDPA-LGPGGAGAKG 1548
Score = 41 (19.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 16 GP-GDKEERGP-GDKKARG 32
GP GD+ ERGP G K G
Sbjct: 1327 GPRGDRGERGPQGPKGEPG 1345
Score = 40 (19.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 8 RASDKEERG-PGDKEERGPGDKKARG 32
RA E G PG++ ERG +K RG
Sbjct: 2038 RAGAAGEAGRPGERGERG--EKGERG 2061
Score = 40 (19.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG+ ++G PG K +G
Sbjct: 2329 KGEAGHAGEPGDPGEDGQKGAPGLKGLKG 2357
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 8 RASDKEERGPGDKEERGPG 26
R +K E+G D E+ GPG
Sbjct: 1435 RTGEKGEKG--DCEDGGPG 1451
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RGP 33
G+R D PG++ GP K +GP
Sbjct: 2132 GKRGPDGNPGLPGERGVSGPEGKPGLQGP 2160
Score = 38 (18.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 16 GP-GDKEERG----PGDKKARGP 33
GP GD+ G PG+K RGP
Sbjct: 1472 GPKGDRGLTGTPGEPGEKGERGP 1494
Score = 36 (17.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 17 PGDKEERGPGDKKARGP 33
PG + GD+ RGP
Sbjct: 1389 PGTSVKGDKGDRGERGP 1405
Score = 33 (16.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ D ++ PG K +G +GP
Sbjct: 2339 GDPGEDGQKGAPGLKGLKGEPGIGVQGP 2366
>UNIPROTKB|P20785 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0007155 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 EMBL:X64458 EMBL:X57998 EMBL:J04598
EMBL:X57987 IPI:IPI00822166 PIR:A32856 RefSeq:NP_990438.1
UniGene:Gga.3110 ProteinModelPortal:P20785 STRING:P20785
PRIDE:P20785 GeneID:396000 KEGG:gga:396000 CTD:1291
eggNOG:NOG256042 HOGENOM:HOG000111863 HOVERGEN:HBG095954
InParanoid:P20785 KO:K06238 OrthoDB:EOG4WWRHX NextBio:20816063
Uniprot:P20785
Length = 1019
Score = 133 (51.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 45/115 (39%), Positives = 58/115 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEK 118
PG E+G PG++ + GP G+ + G PG G G +RGP G +RGP GD +
Sbjct: 386 PGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGE 445
Query: 119 RGP-GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGPGDKEERAPG 170
GP GD+ + GP PGD+ E GP G K RG G + GP APG
Sbjct: 446 PGPPGDQGREGPLGP----PGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPG-APG 495
Score = 122 (48.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 45/107 (42%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGPGDKEER-G-PGDR-EKRGPGDKEERGP-GDKEKR 119
G + GP GD GP G K E G K R G PG EK PG++ E GP G+
Sbjct: 351 GTQGPPGPKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDE 410
Query: 120 G-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP 161
G PG G G ERGP G +RGP GD E G GD+ + GP
Sbjct: 411 GSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGP 457
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/115 (38%), Positives = 56/115 (48%)
Query: 66 GDKEERG-PGDKEKRG-PG-DKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRG- 120
G K E G PG +G PG D + PG K + G K G G+ E G PG + G
Sbjct: 330 GMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYG-PKGGKGEPGEDGKPGRQGIPGS 388
Query: 121 PGDKEKRGPGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG EK PG++ E GP G+ + G PG G+ G +RGP G +R P G
Sbjct: 389 PG--EKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRG 441
Score = 42 (19.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERGP-GDKKARG 32
+ C+G D + PG K + G G K +G
Sbjct: 340 LPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKG 372
Score = 38 (18.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE+ S + G+K +RG
Sbjct: 305 RGEKGSRGAKGAKGEKGKRG 324
>UNIPROTKB|F1NFE0 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0005576 GO:GO:0043234
GO:GO:0042383 GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 GO:GO:0071230 IPI:IPI00822166 OMA:VKENYAE
GeneTree:ENSGT00530000063022 EMBL:AADN02034405 EMBL:AADN02034406
EMBL:AADN02034407 EMBL:AADN02034408 EMBL:AADN02034409
EMBL:AADN02034410 Ensembl:ENSGALT00000039669 ArrayExpress:F1NFE0
Uniprot:F1NFE0
Length = 1020
Score = 133 (51.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 45/115 (39%), Positives = 58/115 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEK 118
PG E+G PG++ + GP G+ + G PG G G +RGP G +RGP GD +
Sbjct: 387 PGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGE 446
Query: 119 RGP-GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGPGDKEERAPG 170
GP GD+ + GP PGD+ E GP G K RG G + GP APG
Sbjct: 447 PGPPGDQGREGPLGP----PGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPG-APG 496
Score = 122 (48.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 45/107 (42%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGPGDKEER-G-PGDR-EKRGPGDKEERGP-GDKEKR 119
G + GP GD GP G K E G K R G PG EK PG++ E GP G+
Sbjct: 352 GTQGPPGPKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDE 411
Query: 120 G-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP 161
G PG G G ERGP G +RGP GD E G GD+ + GP
Sbjct: 412 GSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGP 458
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/115 (38%), Positives = 56/115 (48%)
Query: 66 GDKEERG-PGDKEKRG-PG-DKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRG- 120
G K E G PG +G PG D + PG K + G K G G+ E G PG + G
Sbjct: 331 GMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYG-PKGGKGEPGEDGKPGRQGIPGS 389
Query: 121 PGDKEKRGPGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG EK PG++ E GP G+ + G PG G+ G +RGP G +R P G
Sbjct: 390 PG--EKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRG 442
Score = 42 (19.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERGP-GDKKARG 32
+ C+G D + PG K + G G K +G
Sbjct: 341 LPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKG 373
Score = 38 (18.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE+ S + G+K +RG
Sbjct: 306 RGEKGSRGAKGAKGEKGKRG 325
>UNIPROTKB|F1NI73 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GeneTree:ENSGT00660000095287
EMBL:AADN02034558 EMBL:AADN02034559 IPI:IPI01017330
Ensembl:ENSGALT00000004032 ArrayExpress:F1NI73 Uniprot:F1NI73
Length = 1260
Score = 127 (49.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 44/110 (40%), Positives = 54/110 (49%)
Query: 73 PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG---P-GDKEERGP-GDKEKRGPGDK 124
PG++ G PG K ++G PG K G PG R +RG P G GP GDK + GP
Sbjct: 725 PGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETGPAG- 783
Query: 125 EKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E+G PG G + PG K ER P GL
Sbjct: 784 ---APGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGE-PGGKGERGPPGL 829
Score = 117 (46.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 49/134 (36%), Positives = 60/134 (44%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-------PGDKEERG-PGDREKRGP-GDKEE 110
PGDK E GP G RG PG++ E+G PG + G PG + +RGP G + E
Sbjct: 773 PGDKGETGPAGAPGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGE 832
Query: 111 RGPGDKE--KRGPGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERG----QGDKEKRGP 161
GP + GPG GP G K ERG PG G PG + G GD+ + GP
Sbjct: 833 AGPPGAAGPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGDRGESGP 892
Query: 162 ----GDKEERAPGG 171
G P G
Sbjct: 893 PGVPGPPGHPGPAG 906
Score = 115 (45.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 46/120 (38%), Positives = 57/120 (47%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKE 117
PG + + GP G + G PG+K E GP G G PG R GP PG K
Sbjct: 368 PGPQGQAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGTSGN-PGAKG 426
Query: 118 KRG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEER-APG 170
G PG +G PG K ERG G GP G++ +RG G+ + G PG ER +PG
Sbjct: 427 TPGEPGKNGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGTPGERGSPG 486
Score = 113 (44.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 49/122 (40%), Positives = 57/122 (46%)
Query: 65 PGDKEERGPGDKEKR-GPGDKE-ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERGPG GP K + G PG GP GDR + GP G +G PG
Sbjct: 587 PGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPGGP-- 644
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDK-EERA 168
GP G+ K G PG K + G PG K E G PG++ +G G RG PG E A
Sbjct: 645 -GPAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGA 703
Query: 169 PG 170
G
Sbjct: 704 KG 705
Score = 105 (42.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 47/123 (38%), Positives = 56/123 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDK 116
PG + G PG GP GD+ E GP G +G PG GPG E G PG+
Sbjct: 602 PGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPG-----GPGPAGENGKPGEP 656
Query: 117 EKRGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG----QGDKEKRGPGDKEERA 168
GP GD G PG K E G PG++ +GP G RG G + +GP A
Sbjct: 657 ---GPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGAKGPPGPPG-A 712
Query: 169 PGG 171
PGG
Sbjct: 713 PGG 715
Score = 105 (42.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 44/117 (37%), Positives = 50/117 (42%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG G PG K + GP G G PG++ E GP G GP G G PG+K +
Sbjct: 335 PGTAGFPGSPGFKGEAGPPGPAGASGSPGERGEPGPQGQAGPPGPQGPPGRAGSPGNKGE 394
Query: 119 RGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKE--KRGPGDKEERAPGG 171
GP PG RG PG G PG K G+ K K PG K ER G
Sbjct: 395 MGPSGIPG-APGLPGGRGLPGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENG 450
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 46/117 (39%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRGP-GDK-EERGPGDKEKR 119
PG ERG PG + G G E+GP ERG PG GP GD+ ++ GPG R
Sbjct: 476 PGTPGERGSPGFRGLPGSNGLPGEKGPAG--ERGSPGPPGPSGPAGDRGQDGGPGLPGMR 533
Query: 120 G-PGDKEKRGPGDKEERGPGDKEERG----PGDKEERGQGDKEKRGPGDK-EERAPG 170
G PG G D + PG++ E G PG RGQ PG K E APG
Sbjct: 534 GLPGIPGSPG-SDGKPGPPGNQGEPGRSGPPGPAGPRGQPGV-MGFPGPKGNEGAPG 588
Score = 102 (41.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 45/125 (36%), Positives = 51/125 (40%)
Query: 66 GDKEERG-PGDKEKRGP-GDK-EERGPGDKEERG----PGDREKRG-PGDKEERG-PGDK 116
G ERG PG GP GD+ ++ GPG RG PG G PG +G PG
Sbjct: 501 GPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGSPGSDGKPGPPGNQGEPGRS 560
Query: 117 EKRGP-GDKEKRG----PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG----PGDKEE 166
GP G + + G PG K G PG ERGPG G K G PG
Sbjct: 561 GPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPPGT-PGPAGKNGDVGLPGPPGP 619
Query: 167 RAPGG 171
P G
Sbjct: 620 AGPAG 624
Score = 50 (22.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K E G PG++ A+GP
Sbjct: 668 PGPKGENGIPGERGAQGP 685
Score = 45 (20.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1 MQACRGERASDKEERGPGDKEERGPGDKKARG 32
+Q GER + GDK E PG K A G
Sbjct: 721 LQGMPGERGASGSPGPKGDKGE--PGGKGADG 750
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE + + PG K ERG G A GP
Sbjct: 429 GEPGKNGAKGDPGPKGERGENGTPGAPGP 457
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 14 ERGPGDKEERGPG 26
E PG ERGPG
Sbjct: 584 EGAPGKNGERGPG 596
Score = 38 (18.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKAR 31
+GE PG RGP ++ R
Sbjct: 281 KGEAGQPGANGSPGQPGPRGPTGERGR 307
Score = 37 (18.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M +G R D ++ GD GP
Sbjct: 256 MPGMKGARGFDGKDGAKGDSGAPGP 280
Score = 34 (17.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG+K E GP
Sbjct: 389 PGNKGEMGP 397
Score = 34 (17.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE + PG++ +RG
Sbjct: 446 RGENGTPGAPGPPGEEGKRG 465
Score = 33 (16.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 5 RGERASDKEERGPGDKEERG 24
+GER + PG E G
Sbjct: 443 KGERGENGTPGAPGPPGEEG 462
>UNIPROTKB|P12105 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 GO:GO:0046872 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201 HOVERGEN:HBG004933
EMBL:U07973 EMBL:X00822 EMBL:X00823 EMBL:X00826 EMBL:X00825
EMBL:X00827 EMBL:X00828 EMBL:X00830 EMBL:X00831 EMBL:K02302
EMBL:K02301 EMBL:V00391 EMBL:V00392 EMBL:M36662 IPI:IPI00590578
PIR:A05269 PIR:I50694 UniGene:Gga.42140 ProteinModelPortal:P12105
STRING:P12105 Uniprot:P12105
Length = 1262
Score = 127 (49.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 44/110 (40%), Positives = 54/110 (49%)
Query: 73 PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG---P-GDKEERGP-GDKEKRGPGDK 124
PG++ G PG K ++G PG K G PG R +RG P G GP GDK + GP
Sbjct: 727 PGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETGPAG- 785
Query: 125 EKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E+G PG G + PG K ER P GL
Sbjct: 786 ---APGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGE-PGGKGERGPPGL 831
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/111 (40%), Positives = 55/111 (49%)
Query: 72 GPGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEKRGP-GDKE 125
GPG RG PG G PG K G PG +G PG K ERG G RGP G++
Sbjct: 405 GPGPPGGRGLPGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEG 464
Query: 126 KRGP-GDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
KRG G+ + G PG ERG PG + G G ++GP G++ P G
Sbjct: 465 KRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPG 515
Score = 121 (47.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 47/117 (40%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGPGDKEKR 119
PG K E GP G G PG++ E GP G GP G + G PG K E GP
Sbjct: 346 PGFKGEAGPPGPAGASGNPGERGEPGPQGQAGPPGPQGPPGRAGSPGGKGEMGPSGIPG- 404
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
GPG RG PG G PG K G PG +G G K +RG G R P G
Sbjct: 405 GPGPPGGRGLPGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPG 461
Score = 119 (46.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/134 (36%), Positives = 60/134 (44%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-------PGDKEERG-PGDREKRGP-GDKEE 110
PGDK E GP G RG PG++ E+G PG + G PG + +RGP G + E
Sbjct: 775 PGDKGETGPAGAPGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGE 834
Query: 111 RGPGDKE--KRGPGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERG----QGDKEKRGP 161
GP + GPG GP G K ERG PG G PG + G GD+ + GP
Sbjct: 835 AGPPGAAGPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFPGARGPPGPPGNNGDRGESGP 894
Query: 162 ----GDKEERAPGG 171
G P G
Sbjct: 895 PGVPGPPGHPGPAG 908
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 49/125 (39%), Positives = 56/125 (44%)
Query: 65 PGDKEERG-PG---DKEKRGPGDKE-ERG-PGDKEERGPGDREKRG-PGDKEERGP-GDK 116
PG K E G PG + GPG ERG PG+ GPG K G PG GP G
Sbjct: 280 PGPKGEAGQPGANGSPGQPGPGGPTGERGRPGNPG--GPGAHGKDGAPGTAGPLGPPGPP 337
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEER 167
G PG K + GP G G PG++ E GP G G QG + G PG K E
Sbjct: 338 GTAGFPGSPGFKGEAGPPGPAGASGNPGERGEPGPQGQAGPPGPQGPPGRAGSPGGKGEM 397
Query: 168 APGGL 172
P G+
Sbjct: 398 GPSGI 402
Score = 113 (44.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 49/122 (40%), Positives = 57/122 (46%)
Query: 65 PGDKEERGPGDKEKR-GPGDKE-ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERGPG GP K + G PG GP GDR + GP G +G PG
Sbjct: 589 PGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPGGP-- 646
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDK-EERA 168
GP G+ K G PG K + G PG K E G PG++ +G G RG PG E A
Sbjct: 647 -GPAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGPQGPPGPTGARGGPGPAGSEGA 705
Query: 169 PG 170
G
Sbjct: 706 KG 707
Score = 105 (42.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 47/123 (38%), Positives = 56/123 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDK 116
PG + G PG GP GD+ E GP G +G PG GPG E G PG+
Sbjct: 604 PGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPG-----GPGPAGENGKPGEP 658
Query: 117 EKRGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG----QGDKEKRGPGDKEERA 168
GP GD G PG K E G PG++ +GP G RG G + +GP A
Sbjct: 659 ---GPKGDIGGPGFPGPKGENGIPGERGPQGPPGPTGARGGPGPAGSEGAKGPPGPPG-A 714
Query: 169 PGG 171
PGG
Sbjct: 715 PGG 717
Score = 103 (41.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 46/117 (39%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRGP-GDK-EERGPGDKEKR 119
PG ERG PG + G G E+GP ERG PG GP GD+ ++ GPG R
Sbjct: 478 PGTPGERGSPGFRGLPGSNGLPGEKGPAG--ERGSPGPPGPSGPAGDRGQDGGPGLPGMR 535
Query: 120 G-PGDKEKRGPGDKEERGPGDKEERG----PGDKEERGQGDKEKRGPGDK-EERAPG 170
G PG G D + PG++ E G PG RGQ PG K E APG
Sbjct: 536 GLPGIPGSPG-SDGKPGPPGNQGEPGRSGPPGPAGPRGQPGV-MGFPGPKGNEGAPG 590
Score = 102 (41.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 45/125 (36%), Positives = 51/125 (40%)
Query: 66 GDKEERG-PGDKEKRGP-GDK-EERGPGDKEERG----PGDREKRG-PGDKEERG-PGDK 116
G ERG PG GP GD+ ++ GPG RG PG G PG +G PG
Sbjct: 503 GPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGSPGSDGKPGPPGNQGEPGRS 562
Query: 117 EKRGP-GDKEKRG----PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG----PGDKEE 166
GP G + + G PG K G PG ERGPG G K G PG
Sbjct: 563 GPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPPGT-PGPAGKNGDVGLPGPPGP 621
Query: 167 RAPGG 171
P G
Sbjct: 622 AGPAG 626
Score = 50 (22.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE + + PG K ERG G ARGP
Sbjct: 431 GEPGKNGAKGDPGPKGERGENGTPGARGP 459
Score = 45 (20.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1 MQACRGERASDKEERGPGDKEERGPGDKKARG 32
+Q GER + GDK E PG K A G
Sbjct: 723 LQGMPGERGASGSPGPKGDKGE--PGGKGADG 752
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 14 ERGPGDKEERGPG 26
E PG ERGPG
Sbjct: 586 EGAPGKNGERGPG 598
Score = 37 (18.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M +G R D ++ GD GP
Sbjct: 258 MPGMKGARGFDGKDGAKGDSGAPGP 282
Score = 35 (17.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE + PG++ +RG
Sbjct: 448 RGENGTPGARGPPGEEGKRG 467
>WB|WBGene00018119 [details] [associations]
symbol:F36H12.3 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000535 Pfam:PF00635 PROSITE:PS50202 GO:GO:0005856
GO:GO:0005198 Gene3D:2.60.40.360 InterPro:IPR008962 SUPFAM:SSF49354
GeneTree:ENSGT00690000102102 EMBL:FO081309 PIR:T33457
RefSeq:NP_500767.1 UniGene:Cel.23403 ProteinModelPortal:O76719
SMR:O76719 STRING:O76719 EnsemblMetazoa:F36H12.3 GeneID:177307
KEGG:cel:CELE_F36H12.3 UCSC:F36H12.3 CTD:177307 WormBase:F36H12.3
InParanoid:O76719 OMA:EVTITRN NextBio:896198 Uniprot:O76719
Length = 335
Score = 117 (46.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
KEE+ DK+ +K++ DK+ + EK DK+E DK+ DK+
Sbjct: 105 KEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD- 163
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+K+E DKEE+ KEE+ + KE++ KEE
Sbjct: 164 ---EKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEE 199
Score = 110 (43.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 26/101 (25%), Positives = 52/101 (51%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KE++ KE++ DK++ +K++ D++ + E+ DK++ DK+
Sbjct: 96 EKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKS 155
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
DK++ +K+E DKEE+ + KE++ KEE+
Sbjct: 156 DNKDDKDD----EKKEEKKDDKEEKKEEKKEEKKEEKKEEK 192
Score = 108 (43.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+E +KE + KEE+ DK++ +++ DK+ + EK DK++
Sbjct: 88 EKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKE 147
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
DK+ DK++ +K+E + DKE++ KEE+
Sbjct: 148 DKKDDKKSDNKDDKDD----EKKEEKKDDKEEKKEEKKEEK 184
Score = 106 (42.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/100 (28%), Positives = 53/100 (53%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D + + P +KEK +K+E P +EE+ ++ K+ G K ++ KE++ +KE
Sbjct: 44 DSKMKAPEEKEKSKKSEKKEE-PKKEEEKK--EKSKKSEGKKSDKKEEKKEEKKE-EKED 99
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+ KEE+ DK++ +K++ + DK+ DK+E
Sbjct: 100 KKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSE---DKKE 136
Score = 105 (42.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E +K K+ G K ++ KEE+ ++E + KEE+ DK+ +K+
Sbjct: 66 KKEEEKKEKSKKSEGKKSDKKEEKKEEKKE-EKEDKKEEKKEEKKEDDKKDEKKDEKKDE 124
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
DK+ + E+ DK+E + DK+ DK++
Sbjct: 125 KEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD 163
Score = 104 (41.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
DK+ + EK DK+E DK+ D++ +K+E DKE++ KE+
Sbjct: 128 DKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD----EKKEEKKDDKEEKKEEKKEE 183
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ KEE+ KEE +K+E + D++K P E +
Sbjct: 184 KKEEKKEEKKEEKKEEEKKEEKKEEKKEDEKKVEPKPGEPK 224
Score = 104 (41.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K++ DK+ + E+ DK+E D++ DK++ +K++ DKE+
Sbjct: 120 EKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD----EKKEEKKDDKEE 175
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDK--EKRGPGDKEERAPG 170
+ KEE+ KEE+ KEE + +K EK+ K E PG
Sbjct: 176 KKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKEDEKKVEPKPG 221
Score = 104 (41.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 72 GPGDKEKRGPGDKEERGPG-----DKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
G G K+K+ K P D + + P ++EK +K+E ++EK+ +K K
Sbjct: 20 GCGGKKKKAGAVKSSTAPAPAPKADSKMKAPEEKEKSKKSEKKEEPKKEEEKK---EKSK 76
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+ G K ++ KEE+ +KE++ + KE++ DK++
Sbjct: 77 KSEGKKSDKKEEKKEEKKE-EKEDKKEEKKEEKKEDDKKD 115
Score = 103 (41.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G K ++ KE++ +KE++ KEE+ D++ +K++ DK+ + E
Sbjct: 80 GKKSDKKEEKKEEKKE-EKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDE 138
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
K DK+E DK+ DK++ +K++ DKEE+
Sbjct: 139 KEKDDDKKEDKKDDKKSDNKDDKDD----EKKEEKKDDKEEK 176
Score = 45 (20.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
E+ +KE++ KEE+ DKK
Sbjct: 92 EKKEEKEDKKEEKKEEKKEDDKK 114
Score = 40 (19.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 6 GERASDKEERGPGDKEERGPGDKK 29
G+++ KEE+ KEE+ DKK
Sbjct: 80 GKKSDKKEEKKEEKKEEKE--DKK 101
Score = 36 (17.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
++ KEE+ DK++ +KK
Sbjct: 100 KKEEKKEEKKEDDKKDEKKDEKK 122
Score = 34 (17.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 10 SDKEERGPGDKEERGPGDKK 29
+D + + P +KE+ +KK
Sbjct: 43 ADSKMKAPEEKEKSKKSEKK 62
Score = 34 (17.0 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 7 ERASDKEERGPGDKEERGPGDKKA 30
++ DK++ +K++ DKK+
Sbjct: 108 KKEDDKKDEKKDEKKDEKEEDKKS 131
>GENEDB_PFALCIPARUM|PFE0495w [details] [associations]
symbol:PFE0495w "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844504 RefSeq:XP_001351658.1
ProteinModelPortal:Q8I404 EnsemblProtists:PFE0495w:mRNA
GeneID:812837 KEGG:pfa:PFE0495w EuPathDB:PlasmoDB:PF3D7_0510000
ProtClustDB:CLSZ2446498 Uniprot:Q8I404
Length = 782
Score = 148 (57.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+ G + K+G D E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 244 KKTHGKEKEIKKGDHDVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKE 303
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+E+ D+E+ D+E+ D+EK D E+
Sbjct: 304 NDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDDEK 342
Score = 144 (55.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D E+ D+EK D+E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 259 DVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 318
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGD-KEER 167
D+E+ D+E+ D E+ ++K GD EE+
Sbjct: 319 ENDDDEEKENDDDEEKENDDDDEKANYYVEKKESDGDIAEEK 360
Score = 137 (53.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 76 KEKRGPGDKE-ERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEE 134
K+K +KE ++G D E+ D EK D+E+ D+EK D+EK D+E+
Sbjct: 243 KKKTHGKEKEIKKGDHDVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 302
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+E+ D+E+ D+EK D+E+
Sbjct: 303 ENDDDEEKENDDDEEKENDDDEEKENDDDEEK 334
Score = 127 (49.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+E+ D+EK D+E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 275 DEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 334
Query: 127 RGPGDKEERGPGDKEERGPGD-KEERGQGDK 156
D E+ +++ GD EE+ DK
Sbjct: 335 ENDDDDEKANYYVEKKESDGDIAEEKINNDK 365
>UNIPROTKB|Q8I404 [details] [associations]
symbol:PFE0495w "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844504 RefSeq:XP_001351658.1
ProteinModelPortal:Q8I404 EnsemblProtists:PFE0495w:mRNA
GeneID:812837 KEGG:pfa:PFE0495w EuPathDB:PlasmoDB:PF3D7_0510000
ProtClustDB:CLSZ2446498 Uniprot:Q8I404
Length = 782
Score = 148 (57.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+ G + K+G D E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 244 KKTHGKEKEIKKGDHDVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKE 303
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+E+ D+E+ D+E+ D+EK D E+
Sbjct: 304 NDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDDEK 342
Score = 144 (55.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D E+ D+EK D+E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 259 DVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 318
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGD-KEER 167
D+E+ D+E+ D E+ ++K GD EE+
Sbjct: 319 ENDDDEEKENDDDEEKENDDDDEKANYYVEKKESDGDIAEEK 360
Score = 137 (53.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 76 KEKRGPGDKE-ERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEE 134
K+K +KE ++G D E+ D EK D+E+ D+EK D+EK D+E+
Sbjct: 243 KKKTHGKEKEIKKGDHDVEKEDDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 302
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+E+ D+E+ D+EK D+E+
Sbjct: 303 ENDDDEEKENDDDEEKENDDDEEKENDDDEEK 334
Score = 127 (49.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+E+ D+EK D+E+ D+E+ D EK D+E+ D+EK D+EK
Sbjct: 275 DEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEKENDDDEEK 334
Query: 127 RGPGDKEERGPGDKEERGPGD-KEERGQGDK 156
D E+ +++ GD EE+ DK
Sbjct: 335 ENDDDDEKANYYVEKKESDGDIAEEKINNDK 365
>UNIPROTKB|F1MXS8 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9913
"Bos taurus" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0050777 "negative regulation of immune response"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0043588
"skin development" evidence=IEA] [GO:0043206 "extracellular fibril
organization" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEA] [GO:0032964 "collagen biosynthetic process"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0018149 "peptide cross-linking" evidence=IEA]
[GO:0009314 "response to radiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005586 "collagen type III" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0043588 GO:GO:0005615
GO:GO:0007507 GO:GO:0034097 GO:GO:0030199 GO:GO:0007179
GO:GO:0007229 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
GO:GO:0042060 GO:GO:0001568 GO:GO:0048565 GO:GO:0050777
GO:GO:0009314 GO:GO:0018149 GO:GO:0032964 GO:GO:0071230
GO:GO:0043206 GO:GO:0005201 GeneTree:ENSGT00660000095287
IPI:IPI00731432 OMA:EGSPGHP GO:GO:0005586 EMBL:DAAA02003919
EMBL:DAAA02003920 Ensembl:ENSBTAT00000028617 ArrayExpress:F1MXS8
Uniprot:F1MXS8
Length = 1466
Score = 131 (51.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 49/119 (41%), Positives = 56/119 (47%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEK 118
PG RGP G G PGDK E G PG GP + GPG++ E+GP
Sbjct: 755 PGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGP----RGGPGERGEQGPPGPAG 810
Query: 119 RGPGDKEKRG-PGDKEERG-PGDKEERGPGDKE--ERGQGDKEKRGP-GDKEER-APGG 171
PG + G PG K ERG PG+K E GP G G GP G K ER +PGG
Sbjct: 811 F-PGAPGQNGEPGAKGERGAPGEKGEGGPPGAAGPAGGSGPAGPPGPQGVKGERGSPGG 868
Score = 118 (46.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 44/109 (40%), Positives = 49/109 (44%)
Query: 73 PGDKEKRG-PGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG-PGDKEKR 127
PG RG PG GPG + GP G + + G PG GP G G PG K
Sbjct: 530 PGGPGLRGIPGSPG--GPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGND 587
Query: 128 G-PGDKEERG-PGDKEERGPGDKE-ERG-QGDKEKRGP-GDKEERAPGG 171
G PG ERG PG +GP K E G QG GP GDK + P G
Sbjct: 588 GAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPG 636
Score = 114 (45.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 42/102 (41%), Positives = 48/102 (47%)
Query: 72 GPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDK-EKRGPGDKE 125
GPG K GP G + E G PG GP G G PG K G PG E+ GPG
Sbjct: 544 GPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPG 603
Query: 126 KRGPGDKE-ERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
+GP K E GP G GP GDK + G G + +G PG
Sbjct: 604 PQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPG 645
Score = 108 (43.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 42/110 (38%), Positives = 49/110 (44%)
Query: 73 PGDKEKRGP-GDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEKRGP-GDKEK 126
PG RGP G G PG + G PG +G PG + ERG G GP G+ K
Sbjct: 407 PGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGK 466
Query: 127 RG-PGDKEERG-PGDKEERG-PGDKEERGQGDK--EKRGPGDKEERAPGG 171
G PG+ G PG ERG PG + G EK PGD+ P G
Sbjct: 467 DGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAG 516
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/121 (38%), Positives = 55/121 (45%)
Query: 65 PGDKEERGPGDKE-KRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGPGDKEKR 119
PG +GP K + GP G GP GDK + GP G + +G PG PG+ K
Sbjct: 599 PGGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGP--PGENGKP 656
Query: 120 G-PGDKEKRG----PGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPG 170
G PG K + G PG K + G PG ERGP G G +G GP G K P
Sbjct: 657 GEPGPKGEAGAPGIPGGKGDSGAPG---ERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPP 713
Query: 171 G 171
G
Sbjct: 714 G 714
Score = 102 (41.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 45/121 (37%), Positives = 53/121 (43%)
Query: 73 PGDKEKRG-PGDKEERG----PGDKEERG-PGDREKRG----PGDKEERGP----GDKEK 118
PG+ K G PG K E G PG K + G PG+R G PG + GP G K
Sbjct: 650 PGENGKPGEPGPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGA 709
Query: 119 RGP-GDKEKRG-PGDK----EERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPG 170
GP G G PG + E GPG GPG K ++G+ G G PG R P
Sbjct: 710 AGPPGPPGSAGTPGLQGMPGERGGPG-----GPGPKGDKGEPGSSGVDGAPGKDGPRGPT 764
Query: 171 G 171
G
Sbjct: 765 G 765
Score = 101 (40.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 41/106 (38%), Positives = 50/106 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGPGDKEERG-PGDKEKR 119
PG+ G PG +RG PG + G G E+GP GDR GPG RG G+ +
Sbjct: 470 PGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRG--GPGPAGPRGVAGEPGRD 527
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGP 161
G PG RG PG GPG + GP G + E G+ G GP
Sbjct: 528 GLPGGPGLRGIPGSPG--GPGSDGKPGPPGSQGETGRPGPPGSPGP 571
Score = 101 (40.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 281 PGLKGENGVPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G G G G PG K E
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEM 398
Query: 168 APGGL 172
P G+
Sbjct: 399 GPAGI 403
Score = 47 (21.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 225 GPAGKDGESGRPGRPGERGFPGPPGMKGP 253
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 588 GAPGKNGERGGPGGPGPQGPAGKNGETGP 616
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
+Q GER GPG K ++G PG G
Sbjct: 724 LQGMPGERGGPG---GPGPKGDKGEPGSSGVDG 753
Score = 39 (18.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 284 KGENGVPGENGAPGPMGPRGAPGERGRPG 312
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE + + PG + ERG G GP
Sbjct: 432 GEPGKNGAKGDPGPRGERGEAGSPGIAGP 460
Score = 36 (17.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ + GPG RG + R
Sbjct: 501 GEKGPPGDRGGPGPAGPRGVAGEPGR 526
>TAIR|locus:2197550 [details] [associations]
symbol:AGO3 "ARGONAUTE 3" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593 GO:GO:0031047
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC007654
eggNOG:NOG275416 ProtClustDB:CLSN2682370 IPI:IPI00516671
RefSeq:NP_174414.1 UniGene:At.51183 ProteinModelPortal:Q9SHF2
SMR:Q9SHF2 PaxDb:Q9SHF2 PRIDE:Q9SHF2 EnsemblPlants:AT1G31290.1
GeneID:840017 KEGG:ath:AT1G31290 TAIR:At1g31290 InParanoid:Q9SHF2
OMA:ELAMVKE PhylomeDB:Q9SHF2 Genevestigator:Q9SHF2 Uniprot:Q9SHF2
Length = 1194
Score = 134 (52.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 34/90 (37%), Positives = 43/90 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PGD + G GD + G GD G GD + G GD + G GD + G GD + G GD
Sbjct: 156 PGDVGQGGVGDVGRDGVGDVGRDGVGDVGQGGVGDVGQVGVGDVGQGGVGDVGQGGVGDV 215
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQG 154
+ G GD G GD G GD+ + G
Sbjct: 216 GRDGVGDVGRDGVGDVGRGGVGDRGQSQSG 245
Score = 134 (52.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 34/90 (37%), Positives = 43/90 (47%)
Query: 81 PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDK 140
PGD + G GD G GD + G GD + G GD + G GD + G GD + G GD
Sbjct: 156 PGDVGQGGVGDVGRDGVGDVGRDGVGDVGQGGVGDVGQVGVGDVGQGGVGDVGQGGVGDV 215
Query: 141 EERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G GD G GD + G GD+ + G
Sbjct: 216 GRDGVGDVGRDGVGDVGRGGVGDRGQSQSG 245
Score = 126 (49.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/90 (37%), Positives = 41/90 (45%)
Query: 73 PGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDK 132
PGD + G GD G GD G GD + G GD + G GD + G GD + G GD
Sbjct: 156 PGDVGQGGVGDVGRDGVGDVGRDGVGDVGQGGVGDVGQVGVGDVGQGGVGDVGQGGVGDV 215
Query: 133 EERGPGDKEERGPGDKEERGQGDKEKRGPG 162
G GD G GD G GD+ + G
Sbjct: 216 GRDGVGDVGRDGVGDVGRGGVGDRGQSQSG 245
Score = 114 (45.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/101 (38%), Positives = 45/101 (44%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRG-PG 130
G GD RG G +RG G RG G R + G GD+ G GD RG G RG G
Sbjct: 9 GRGDGRGRGGGG--DRGRG-YSGRGDG-RGRGGDGDRGYSGRGDGHGRGGGGDRGRGYSG 64
Query: 131 DKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ RG G +RG G G+GD RG G R G
Sbjct: 65 RGDGRGRGGGGDRGRGYS---GRGDGHGRGGGGDRGRGYSG 102
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 5 RGERASDKEERGPGDKEE--RGPGDKKARG 32
RG R + G GD+ G GD + RG
Sbjct: 7 RGGRGDGRGRGGGGDRGRGYSGRGDGRGRG 36
Score = 40 (19.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 8 RASDKEERGPGDKEERGPGDKKARG 32
R + G GD+ G GD RG
Sbjct: 29 RGDGRGRGGDGDRGYSGRGDGHGRG 53
>RGD|70922 [details] [associations]
symbol:Col5a3 "collagen, type V, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005588 "collagen type V"
evidence=ISO;TAS] [GO:0007160 "cell-matrix adhesion"
evidence=IEA;ISO] [GO:0008201 "heparin binding" evidence=IEA;ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0043394
"proteoglycan binding" evidence=IPI] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:70922
GO:GO:0008201 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007160 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 EMBL:CH473993 HOGENOM:HOG000085654
HOVERGEN:HBG004933 KO:K06236 GO:GO:0005588 SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:50509 OMA:KGDVGQD OrthoDB:EOG4SBDZX
EMBL:AF272661 IPI:IPI00199738 RefSeq:NP_068528.1 UniGene:Rn.38654
STRING:Q9JI04 Ensembl:ENSRNOT00000027897 GeneID:60379 KEGG:rno:60379
UCSC:RGD:70922 InParanoid:Q9JI04 NextBio:612067
Genevestigator:Q9JI04 Uniprot:Q9JI04
Length = 1737
Score = 131 (51.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 51/123 (41%), Positives = 64/123 (52%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRG-PGDKEERG-PGDKEK 118
PG + E GP G K G PGD+ G G+K + G PG G PG K G PG
Sbjct: 751 PGPRGEDGPEGQKGPEGLPGDEGPPGAAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPL-- 808
Query: 119 RGP-GDKEKRG----PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAP 169
GP G+K KRG PG++ ERG PG + +RG PG + G +GD + G PG E+
Sbjct: 809 -GPLGEKGKRGKAGQPGEEGERGTPGTRGDRGQPGATGQPGPKGDVGQNGSPGAPGEKGL 867
Query: 170 GGL 172
GL
Sbjct: 868 PGL 870
Score = 100 (40.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 43/117 (36%), Positives = 52/117 (44%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGD 115
PGD G GDK GP G ERGP G G PG +GP G E+G PG+
Sbjct: 982 PGDPGPIGLKGDKGPPGPLGANGSPGERGPVGPSGGIGLPGQSGGQGPIGPAGEKGSPGE 1041
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
+ GP K+ PG +GP GP +E GDK + G PG K + G
Sbjct: 1042 RGVPGPTGKDGI-PGPPGLQGPPGAA--GPSGEE----GDKGEVGMPGHKGSKGDKG 1091
Score = 48 (22.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 1 MQACRGERASD-----KEERGP-GDKEERG-PGDKKARGP 33
+Q +GER D K + GP GD+ G PG + GP
Sbjct: 720 LQGEKGERGEDGFPGFKGDEGPKGDRGNPGLPGPRGEDGP 759
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARG 32
GE+ + PG++ ERG PG + RG
Sbjct: 812 GEKGKRGKAGQPGEEGERGTPGTRGDRG 839
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G+R D PG+K +RG G GP
Sbjct: 544 KGDRGFDGLPGLPGEKGQRGDFGPVGQPGP 573
Score = 38 (18.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARG 32
E + + +G G K++RG +K +G
Sbjct: 241 ETPAPRRRKGKGKKKDRG---RKGKG 263
>UNIPROTKB|E7ENY8 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 EMBL:AC066694 HGNC:HGNC:2201
ChiTaRS:COL3A1 IPI:IPI00981037 PDB:4GYX PDBsum:4GYX
ProteinModelPortal:E7ENY8 SMR:E7ENY8 PRIDE:E7ENY8
Ensembl:ENST00000317840 ArrayExpress:E7ENY8 Bgee:E7ENY8
Uniprot:E7ENY8
Length = 1163
Score = 128 (50.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 47/119 (39%), Positives = 56/119 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG 120
PG++ G PG K +G PG G PG RGP G GP + PGDK + G
Sbjct: 728 PGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQ----PGDKGEGG 783
Query: 121 ----PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E GP G G PG E G G E+ PG+K E P GL
Sbjct: 784 APGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPG-GKGERGAPGEKGEGGPPGL 841
Score = 120 (47.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 50/127 (39%), Positives = 55/127 (43%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG----PGDK 116
PG RG G+ + G PG RG PG GPG K GP G + E G PG
Sbjct: 512 PGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 117 EKRG-------PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGPG-DK 164
RG PG K G PG ERG PG +GP G E G QG GPG DK
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDK 629
Query: 165 EERAPGG 171
+ P G
Sbjct: 630 GDTGPPG 636
Score = 114 (45.2 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 47/119 (39%), Positives = 56/119 (47%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 776 PGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGF-PGAPGQNGEPGGKGERGAPGEKG 834
Query: 118 KRGPGDKEKRGPGDKEERG--PGDKEERGP-GDKEERG-QGDKEKRG-PGDK-EERAPG 170
+ GP GP K+ PG GP G++ ERG +G G PG APG
Sbjct: 835 EGGPPGLF--GPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPG 891
Score = 109 (43.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 48/125 (38%), Positives = 55/125 (44%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP-GDKEE 110
PG + ERG PG K + G PG+ G PG ERG PG R GP G E
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE 502
Query: 111 RGPGDKEKRGPGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP-GDKEE 166
+GP E+ PG RG G+ G PG RG PG G G K GP G + E
Sbjct: 503 KGPAG-ERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGE 559
Query: 167 RA-PG 170
PG
Sbjct: 560 SGRPG 564
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 281 PGLKGENGLPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G +G G G PG K E
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEM 398
Query: 168 APGGL 172
P G+
Sbjct: 399 GPAGI 403
Score = 47 (21.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 225 GPAGKDGESGRPGRPGERGLPGPPGIKGP 253
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 588 GAPGKNGERGGPGGPGPQGPPGKNGETGP 616
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPG 312
Score = 33 (16.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ E PG RG + R
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGR 526
>UNIPROTKB|B3LY22 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7217 "Drosophila ananassae" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743 EMBL:CH902617
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 eggNOG:NOG123880
RefSeq:XP_001954317.1 STRING:B3LY22 EnsemblMetazoa:FBtr0121508
GeneID:6499602 KEGG:dan:Dana_GF16808 FlyBase:FBgn0093829
InParanoid:B3LY22 OrthoDB:EOG4905QZ Uniprot:B3LY22
Length = 1140
Score = 141 (54.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/123 (38%), Positives = 72/123 (58%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G++ +RG ++ +RG GD+ ERG GD+ ERG GDR +RG G++ ERG GD++++ G +
Sbjct: 920 GERNDRG-AERSERG-GDRNERG-GDRIERG-GDRIERG-GERAERG-GDRDRKDDGGAD 973
Query: 126 -----KRGP------GDKEERG-PG---DKEERGPGDKE-ERG-QGDKEKRGPGDKEERA 168
+R P G K+ G P DK RG GD+E +R + D +R D+++R
Sbjct: 974 SSWRVRREPDSQRAAGAKDAGGAPASRDDKWRRG-GDRERDRDFRNDGPRRDRDDRDDRD 1032
Query: 169 PGG 171
GG
Sbjct: 1033 RGG 1035
Score = 140 (54.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/174 (29%), Positives = 71/174 (40%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
R ER D+ ERG GD+ ERG G++ RG
Sbjct: 936 RNERGGDRIERG-GDRIERG-GERAERGGDRDRKDDGGADSSWRVRREPDSQRAAGAKDA 993
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGP--G 122
G R DK +RG GD+E D++ R G R R D +RG G + GP
Sbjct: 994 GGAPASRD--DKWRRG-GDRER----DRDFRNDGPRRDRDDRDDRDRG-GFRRNDGPRRN 1045
Query: 123 DKEKRGPGDKEERGP--GDKEERGPG-DKEERGQGDK--EKRGPGDKEERAPGG 171
D+ +R G P D++ R PG ++ +R D ++RGP KE GG
Sbjct: 1046 DEPQRETGGNWRDAPRQSDRDNRRPGGERRDRDGRDVRGDQRGPASKEAGGGGG 1099
Score = 106 (42.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 67 DKEERGPGDKEKRGP--GDKEERGPGDKEERGP--GDREKRGPG-DKEERGPGDK--EKR 119
D +RG G + GP D+ +R G P DR+ R PG ++ +R D ++R
Sbjct: 1029 DDRDRG-GFRRNDGPRRNDEPQRETGGNWRDAPRQSDRDNRRPGGERRDRDGRDVRGDQR 1087
Query: 120 GPGDKEKRGPGD--KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE 165
GP KE G G P ++E+ P K ++ Q DKE +G D E
Sbjct: 1088 GPASKEAGGGGGGGNWRTAPAPRDEK-PAAKRDQPQ-DKENKGGDDGE 1133
Score = 103 (41.3 bits), Expect = 0.00054, P = 0.00054
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEE-----RGPGDKEKR-- 119
D++ R +K++ + E + D+E +R +KE RG GD+
Sbjct: 848 DEKRRAQYEKQRAKEEEAERKIKEDRERLAREVAVERERSEKERDTWRPRG-GDRPSAPA 906
Query: 120 -GPGDKEKRGP--GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G G+ + P G++ +RG ++ ERG GD+ ERG GD+ +RG GD+ ER GG
Sbjct: 907 GGAGEWRRAAPPAGERNDRG-AERSERG-GDRNERG-GDRIERG-GDRIER--GG 955
Score = 69 (29.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
R ER D+ ERG GD+ ERG GD+ RG
Sbjct: 929 RSERGGDRNERG-GDRIERG-GDRIERG 954
Score = 66 (28.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
R +R +++ ERG GD+ ERG GD+ RG
Sbjct: 922 RNDRGAERSERG-GDRNERG-GDRIERG 947
>UNIPROTKB|F1RYI8 [details] [associations]
symbol:COL3A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0050777 "negative regulation of immune response"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0043588
"skin development" evidence=IEA] [GO:0043206 "extracellular fibril
organization" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEA] [GO:0032964 "collagen biosynthetic process"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0018149 "peptide cross-linking" evidence=IEA]
[GO:0009314 "response to radiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005586 "collagen type III" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0043588 GO:GO:0005615
GO:GO:0007507 GO:GO:0034097 GO:GO:0030199 GO:GO:0007179
GO:GO:0007229 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
GO:GO:0042060 GO:GO:0001568 GO:GO:0048565 GO:GO:0050777
GO:GO:0009314 GO:GO:0018149 GO:GO:0032964 GO:GO:0071230
GO:GO:0043206 GO:GO:0005201 GeneTree:ENSGT00660000095287 KO:K06236
CTD:1281 OMA:EGSPGHP GO:GO:0005586 EMBL:CU467671
RefSeq:NP_001230226.1 UniGene:Ssc.24309 UniGene:Ssc.97562
Ensembl:ENSSSCT00000017459 GeneID:100152001 KEGG:ssc:100152001
Uniprot:F1RYI8
Length = 1466
Score = 130 (50.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 65 PGDKE-ERGPGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGD 115
PG++ GPG K +G PG G PG RGP G G PGDK E G PG
Sbjct: 729 PGERGGSGGPGPKGDKGDPGGSGADGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGL 788
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
GP + GPG++ E GP PG + G+ G K +RG PG+K E P G+
Sbjct: 789 PGIAGP----RGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKGEGGPPGI 842
Score = 120 (47.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 47/120 (39%), Positives = 54/120 (45%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 777 PGDKGESGAPGLPGIAGPRGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKG 835
Query: 118 KRGPGD--KEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ GP + G G GP G K ERG PG G G + GP G P G
Sbjct: 836 EGGPPGIAGQPGGTGPPGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGSNGNPGPPG 895
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/102 (41%), Positives = 47/102 (46%)
Query: 72 GPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDK-EKRGPGDKE 125
GPG K GP G + E G PG GP G G PG K G PG E+ GPG
Sbjct: 545 GPGSDGKPGPPGSQGESGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPG 604
Query: 126 KRGP-GDKEERGP-GDKEERGPG-DKEERGQ-GDKEKRG-PG 162
GP G E GP G GPG DK + G G + +G PG
Sbjct: 605 LPGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGQQGLQGLPG 646
Score = 101 (40.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 282 PGLKGENGLPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 339
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G G G G PG K E
Sbjct: 340 GTAGFPGSPGAKGEVGPAGSPGPSGSPGQRGEPGPQGHAGAAGPPGPPGSNGSPGGKGEM 399
Query: 168 APGGL 172
P G+
Sbjct: 400 GPAGI 404
Score = 47 (21.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 226 GPAGKDGESGRPGRPGERGLPGPPGLKGP 254
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGER PG K E G PG+ A G
Sbjct: 447 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 478
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 285 KGENGLPGENGAPGPMGPRGAPGERGRPG 313
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ E GPG RG + R
Sbjct: 502 GEKGPAGERGGPGPAGPRGVAGEPGR 527
>UNIPROTKB|E2RRS5 [details] [associations]
symbol:RBM12B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:EHFRRPP CTD:389677 EMBL:AAEX03015951 RefSeq:XP_544177.3
Ensembl:ENSCAFT00000014490 GeneID:487048 KEGG:cfa:487048
NextBio:20860720 Uniprot:E2RRS5
Length = 994
Score = 148 (57.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 32/105 (30%), Positives = 59/105 (56%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P ++E R P D++ RGP D+
Sbjct: 752 PPEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRR-PREEEFRRPPDEDFRGPPDE 810
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+ R P +++ R P +++ RGP D++ R +++ R P +++ R P
Sbjct: 811 DFRQPAEEDFRSPQEEDFRGPSDEDFRRLPEEDPREPPEEDPRLP 855
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P + R P + +R P ++
Sbjct: 736 PPEHLRRPPPEHFRRPPPEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRR-PREE 794
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
E R P D++ RGP D++ R P +++ R +++ RGP D++ R
Sbjct: 795 EFRRPPDEDFRGPPDEDFRQPAEEDFRSPQEEDFRGPSDEDFR 837
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/105 (29%), Positives = 56/105 (53%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P + R P ++E R P D+
Sbjct: 744 PPEHFRRPPPEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRR-PREEEFRRPPDE 802
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+ RGP D++ R P +++ R P +++ RG D++ R +++ R P
Sbjct: 803 DFRGPPDEDFRQPAEEDFRSPQEEDFRGPSDEDFRRLPEEDPREP 847
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P + R P + +R P +
Sbjct: 728 PPEHFRRPPPEHLRRPPPEHFRRPPPEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEH 787
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+R P ++E R P D++ RGP D++ R +++ R P +++ R P
Sbjct: 788 FRR-PREEEFRRPPDEDFRGPPDEDFRQPAEEDFRSPQEEDFRGP 831
Score = 119 (46.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P + R P + +R P +
Sbjct: 720 PEEDFRRPPPEHFRRPPPEHLRRPPPEHFRRPPPEHFRRPPPEHFRRPPQEHFRRPPQEH 779
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+R P + R P ++E R P D++ RG D++ R P +++ R+P
Sbjct: 780 FRRPPQEHFRR-PREEEFRRPPDEDFRGPPDEDFRQPAEEDFRSP 823
Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P + R P + +R P + R P + R P + +R P + R P + +R P +
Sbjct: 712 PEEDFRRSPEEDFRRPPPEHFRRPPPEHLRRPPPEHFRRPPPEHFRRPPPEHFRRPPQEH 771
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+R P + R P + R P ++E R D++ RGP D++ R P
Sbjct: 772 FRRPPQEHFRRPPQEHFRR-PREEEFRRPPDEDFRGPPDEDFRQP 815
Score = 108 (43.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKR----- 119
P D++ RGP D++ R P +++ R P +++ RGP D + R +++ R P +++ R
Sbjct: 799 PPDEDFRGPPDEDFRQPAEEDFRSPQEEDFRGPSDEDFRRLPEEDPREPPEEDPRLPDPF 858
Query: 120 -GPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQ 153
PG++ + P D P R G K + G+
Sbjct: 859 RPPGEEFRSPPDDFRSHRPFVNFGRPEGGKFDFGK 893
Score = 44 (20.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 8 RASDKEERGPGDKEERGPGDKKARGP 33
R + R P ++E R P D+ RGP
Sbjct: 782 RPPQEHFRRPREEEFRRPPDEDFRGP 807
>UNIPROTKB|F1NI72 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9031
"Gallus gallus" [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005586 "collagen type III"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0009314 "response to radiation" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0032964 "collagen biosynthetic
process" evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0043206
"extracellular fibril organization" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA] [GO:0050777
"negative regulation of immune response" evidence=IEA] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005615 GO:GO:0034097
GO:GO:0030199 GO:GO:0007179 GO:GO:0007229 GO:GO:0007160
InterPro:IPR008160 Pfam:PF01391 GO:GO:0042060 GO:GO:0050777
GO:GO:0009314 GO:GO:0018149 GO:GO:0071230 GO:GO:0043206
GO:GO:0005201 GeneTree:ENSGT00660000095287 GO:GO:0005586
EMBL:AADN02034558 EMBL:AADN02034559 IPI:IPI00589264
Ensembl:ENSGALT00000004033 OMA:ETCLSAN ArrayExpress:F1NI72
Uniprot:F1NI72
Length = 1498
Score = 127 (49.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 44/110 (40%), Positives = 54/110 (49%)
Query: 73 PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG---P-GDKEERGP-GDKEKRGPGDK 124
PG++ G PG K ++G PG K G PG R +RG P G GP GDK + GP
Sbjct: 763 PGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETGPAG- 821
Query: 125 EKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E+G PG G + PG K ER P GL
Sbjct: 822 ---APGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGE-PGGKGERGPPGL 867
Score = 121 (47.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 43/119 (36%), Positives = 56/119 (47%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
PG E+GP G + +RG PGD +G G + G PG R GP G G+ K G
Sbjct: 961 PGAPGEKGPPGARGERGTPGDPGPQGIIGSRGSTGLPGPRGLPGPAGMAG-GKGEDGKPG 1019
Query: 121 ----PGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG++ GP G +RG PG+ G PG G+ D G GD+ E P G+
Sbjct: 1020 VNGVPGERGAPGPQGPMGQRGLPGEPGRDGNPGSDGSPGR-DGSPGGKGDRGESGPPGV 1077
Score = 115 (45.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 45/117 (38%), Positives = 55/117 (47%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-------PGDKEERG-PGDREKRGP-GDKEE 110
PGDK E GP G RG PG++ E+G PG + G PG + +RGP G + E
Sbjct: 811 PGDKGETGPAGAPGPAGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGE 870
Query: 111 RGPGDKE--KRGPGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP 161
GP + GPG GP G K ERG PG G PG + G G+ GP
Sbjct: 871 AGPPGAAGPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGSPGP 927
Score = 115 (45.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 46/120 (38%), Positives = 57/120 (47%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKE 117
PG + + GP G + G PG+K E GP G G PG R GP PG K
Sbjct: 406 PGPQGQAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGTSGN-PGAKG 464
Query: 118 KRG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEER-APG 170
G PG +G PG K ERG G GP G++ +RG G+ + G PG ER +PG
Sbjct: 465 TPGEPGKNGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGTPGERGSPG 524
Score = 113 (44.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 49/122 (40%), Positives = 57/122 (46%)
Query: 65 PGDKEERGPGDKEKR-GPGDKE-ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERGPG GP K + G PG GP GDR + GP G +G PG
Sbjct: 625 PGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPGGP-- 682
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDK-EERA 168
GP G+ K G PG K + G PG K E G PG++ +G G RG PG E A
Sbjct: 683 -GPAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGA 741
Query: 169 PG 170
G
Sbjct: 742 KG 743
Score = 109 (43.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 46/116 (39%), Positives = 53/116 (45%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGPGDKEERGP-GDREKRGPGDKE--ERGPGDKEKR 119
PG++ E+G PG G PG E PG K ERGP G R + GP + GPG
Sbjct: 832 PGERGEQGLPGPAGFPGAPGQNGE--PGGKGERGPPGLRGEAGPPGAAGPQGGPGAPGPP 889
Query: 120 GP-GDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGPGDKEERAPG 170
GP G K +RG PG G PG RG PG G G GP K+ PG
Sbjct: 890 GPQGVKGERGSPGGPGAAGFPG---ARGLPGPPGNNGSPGPPGNAGPPGKDG-PPG 941
Score = 105 (42.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 47/123 (38%), Positives = 56/123 (45%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDK 116
PG + G PG GP GD+ E GP G +G PG GPG E G PG+
Sbjct: 640 PGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQGLPG-----GPGPAGENGKPGEP 694
Query: 117 EKRGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG----QGDKEKRGPGDKEERA 168
GP GD G PG K E G PG++ +GP G RG G + +GP A
Sbjct: 695 ---GPKGDIGGPGFPGPKGENGIPGERGAQGPPGPTGARGGPGPAGSEGAKGPPGPPG-A 750
Query: 169 PGG 171
PGG
Sbjct: 751 PGG 753
Score = 105 (42.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 43/116 (37%), Positives = 52/116 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG RGP + R PG+ GPG + G PG GP G G PG P
Sbjct: 331 PGQPGPRGPTGERGR-PGNPG--GPGAHGKDGAPGAAGPPGPPGPPGTAGFPGS-----P 382
Query: 122 GDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPGGL 172
G K + GP G G PG++ E GP G G QG + G PG+K E P G+
Sbjct: 383 GFKGEAGPPGPAGASGSPGERGEPGPQGQAGPPGPQGPPGRAGSPGNKGEMGPSGI 438
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/117 (39%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRGP-GDK-EERGPGDKEKR 119
PG ERG PG + G G E+GP ERG PG GP GD+ ++ GPG R
Sbjct: 514 PGTPGERGSPGFRGLPGSNGLPGEKGPAG--ERGSPGPPGPSGPAGDRGQDGGPGLPGMR 571
Query: 120 G-PGDKEKRGPGDKEERGPGDKEERG----PGDKEERGQGDKEKRGPGDK-EERAPG 170
G PG G D + PG++ E G PG RGQ PG K E APG
Sbjct: 572 GLPGIPGSPG-SDGKPGPPGNQGEPGRSGPPGPAGPRGQPGV-MGFPGPKGNEGAPG 626
Score = 102 (41.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 45/125 (36%), Positives = 51/125 (40%)
Query: 66 GDKEERG-PGDKEKRGP-GDK-EERGPGDKEERG----PGDREKRG-PGDKEERG-PGDK 116
G ERG PG GP GD+ ++ GPG RG PG G PG +G PG
Sbjct: 539 GPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGSPGSDGKPGPPGNQGEPGRS 598
Query: 117 EKRGP-GDKEKRG----PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG----PGDKEE 166
GP G + + G PG K G PG ERGPG G K G PG
Sbjct: 599 GPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPPGT-PGPAGKNGDVGLPGPPGP 657
Query: 167 RAPGG 171
P G
Sbjct: 658 AGPAG 662
Score = 50 (22.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K E G PG++ A+GP
Sbjct: 706 PGPKGENGIPGERGAQGP 723
Score = 45 (20.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1 MQACRGERASDKEERGPGDKEERGPGDKKARG 32
+Q GER + GDK E PG K A G
Sbjct: 759 LQGMPGERGASGSPGPKGDKGE--PGGKGADG 788
Score = 43 (20.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE + + PG K ERG G A GP
Sbjct: 467 GEPGKNGAKGDPGPKGERGENGTPGAPGP 495
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 14 ERGPGDKEERGPG 26
E PG ERGPG
Sbjct: 622 EGAPGKNGERGPG 634
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 17 PGDKEERGPGDKKARGP 33
PGDK E GP A GP
Sbjct: 811 PGDKGETGPAG--APGP 825
Score = 42 (19.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG K ERGP G + GP
Sbjct: 856 PGGKGERGPPGLRGEAGP 873
Score = 38 (18.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKAR 31
+GE PG RGP ++ R
Sbjct: 319 KGEAGQPGANGSPGQPGPRGPTGERGR 345
Score = 37 (18.1 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M +G R D ++ GD GP
Sbjct: 294 MPGMKGARGFDGKDGAKGDSGAPGP 318
Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 16 GPGDKEERG-PG 26
GPG++ E+G PG
Sbjct: 831 GPGERGEQGLPG 842
Score = 34 (17.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG+K E GP
Sbjct: 427 PGNKGEMGP 435
Score = 34 (17.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE + PG++ +RG
Sbjct: 484 RGENGTPGAPGPPGEEGKRG 503
Score = 33 (16.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 5 RGERASDKEERGPGDKEERG 24
+GER + PG E G
Sbjct: 481 KGERGENGTPGAPGPPGEEG 500
>MGI|MGI:88453 [details] [associations]
symbol:Col3a1 "collagen, type III, alpha 1" species:10090 "Mus
musculus" [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0005178 "integrin binding" evidence=ISO] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IDA] [GO:0005586 "collagen type III"
evidence=ISO;IDA] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0009314 "response to radiation" evidence=ISO] [GO:0018149
"peptide cross-linking" evidence=ISO] [GO:0030199 "collagen fibril
organization" evidence=ISO;IMP] [GO:0031012 "extracellular matrix"
evidence=ISO;IDA] [GO:0032964 "collagen biosynthetic process"
evidence=ISO] [GO:0034097 "response to cytokine stimulus"
evidence=ISO] [GO:0042060 "wound healing" evidence=ISO] [GO:0043206
"extracellular fibril organization" evidence=ISO] [GO:0043588 "skin
development" evidence=ISO] [GO:0046332 "SMAD binding" evidence=IPI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048407
"platelet-derived growth factor binding" evidence=ISO] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0050777 "negative
regulation of immune response" evidence=ISO] [GO:0071230 "cellular
response to amino acid stimulus" evidence=IDA] InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 MGI:MGI:88453 GO:GO:0043588 GO:GO:0005615
GO:GO:0007507 GO:GO:0046872 GO:GO:0034097 GO:GO:0030199
GO:GO:0001501 GO:GO:0007179 GO:GO:0007229 GO:GO:0007160
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0042060
GO:GO:0001568 GO:GO:0048565 GO:GO:0050777 GO:GO:0009314
GO:GO:0018149 GO:GO:0032964 GO:GO:0071230 GO:GO:0043206
GO:GO:0005201 HOVERGEN:HBG004933 KO:K06236 OrthoDB:EOG4FTW1C
CTD:1281 OMA:EGSPGHP ChiTaRS:COL3A1 GO:GO:0005586 EMBL:X52046
EMBL:BC043089 EMBL:BC058724 EMBL:M18933 EMBL:K03037 EMBL:AK019448
EMBL:X57983 IPI:IPI00129571 PIR:A27353 PIR:S59856
RefSeq:NP_034060.2 UniGene:Mm.249555 ProteinModelPortal:P08121
SMR:P08121 STRING:P08121 PhosphoSite:P08121 PaxDb:P08121
PRIDE:P08121 Ensembl:ENSMUST00000087883 GeneID:12825 KEGG:mmu:12825
InParanoid:P08121 NextBio:282310 Bgee:P08121 CleanEx:MM_COL3A1
Genevestigator:P08121 Uniprot:P08121
Length = 1464
Score = 129 (50.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 50/119 (42%), Positives = 56/119 (47%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG----PGDREKRG-PGDKEERGPGDKEK 118
PG RGP G GP + PGDK E G PG RG PG++ E GP
Sbjct: 754 PGKDGPRGPAGPIGPPGPAGQ----PGDKGEGGSPGLPGIAGPRGGPGERGEHGPPGPAG 809
Query: 119 RGPGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER-APGG 171
PG + G PG K ERG PG+K E GP G G G GP G K ER +PGG
Sbjct: 810 F-PGAPGQNGEPGAKGERGAPGEKGEGGPPGPAGPTGSSGPAGPPGPQGVKGERGSPGG 867
Score = 113 (44.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/116 (39%), Positives = 54/116 (46%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKEKRG 120
PG ERGP G + GP G E+GP E GPG RG G+ G PG RG
Sbjct: 478 PGAAGERGPSGFRGPAGPNGIPGEKGPPG-ERGGPGPAGPRGVAGEPGRDGTPGGPGIRG 536
Query: 121 -PGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG-PGDK-EERAPG 170
PG GPG+ + GP G + E G PG G +G G PG K + APG
Sbjct: 537 MPGSPG--GPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPG 590
Score = 113 (44.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/121 (38%), Positives = 57/121 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEK 118
PG + G PG +G PG + ERG G GP G+ K G PG+ G PG +
Sbjct: 424 PGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGE 483
Query: 119 RGP-GDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEER----APG 170
RGP G + GP G E+GP E GPG RG G+ + G PG R +PG
Sbjct: 484 RGPSGFRGPAGPNGIPGEKGPPG-ERGGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPG 542
Query: 171 G 171
G
Sbjct: 543 G 543
Score = 111 (44.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 42/102 (41%), Positives = 48/102 (47%)
Query: 72 GPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDK-EKRGPGDKE 125
GPG+ K GP G + E G PG GP G G PG K G PG E+ GPG
Sbjct: 543 GPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPG 602
Query: 126 KRGPGDKE-ERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
GP K E GP G GP GDK + G G + +G PG
Sbjct: 603 LPGPAGKNGETGPQGPPGPTGPAGDKGDSGPPGPQGLQGIPG 644
Score = 106 (42.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PGD PG RG PG++ G PG RG G + GP G
Sbjct: 280 PGLKGENGLPGDNG--APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 337
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G +G G G PG K E
Sbjct: 338 GTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEM 397
Query: 168 APGGL 172
P G+
Sbjct: 398 GPAGI 402
Score = 47 (21.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 224 GPAGKDGESGRPGRPGERGLPGPPGIKGP 252
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGER PG K E G PG+ A G
Sbjct: 445 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 476
Score = 39 (18.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ E GPG RG + R
Sbjct: 500 GEKGPPGERGGPGPAGPRGVAGEPGR 525
>UNIPROTKB|J9P0L0 [details] [associations]
symbol:COL3A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GeneTree:ENSGT00660000095287 KO:K06236
CTD:1281 EMBL:AAEX03017880 RefSeq:XP_851009.1
Ensembl:ENSCAFT00000047312 GeneID:478835 KEGG:cfa:478835
Uniprot:J9P0L0
Length = 1465
Score = 129 (50.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 51/127 (40%), Positives = 56/127 (44%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG----PGDK 116
PG RG PG+ + G PG RG PG GPG K GP G + E G PG
Sbjct: 512 PGPAGPRGAPGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 117 EKRG-------PGDKEKRG-PGDKEERG-PGDKEERGPGDKE-ERG-QGDKEKRGP-GDK 164
RG PG K G PG ERG PG +GP K E G QG GP GDK
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPAGDK 629
Query: 165 EERAPGG 171
+ P G
Sbjct: 630 GDAGPPG 636
Score = 127 (49.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 65 PGDKE-ERGPGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGD 115
PG++ GPG K +G PG G PG RGP G G PGDK E G PG
Sbjct: 728 PGERGGPGGPGPKGDKGEPGSAGADGAPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGL 787
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
GP + GPG++ E GP PG + G+ G K +RG PG+K E P G+
Sbjct: 788 PGIAGP----RGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKGEGGPPGV 841
Score = 117 (46.2 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 47/120 (39%), Positives = 54/120 (45%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 776 PGDKGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKG 834
Query: 118 KRGPGDKE--KRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ GP G G GP G K ERG PG G G + GP G+ P G
Sbjct: 835 EGGPPGVAGPPGGAGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPG 894
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 49/125 (39%), Positives = 56/125 (44%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP-GDKEE 110
PG + ERG PG K + G PG+ G PG ERG PG R G G E
Sbjct: 443 PGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGE 502
Query: 111 RGPGDKEKRGPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP-GDKEE 166
+GP E+ GPG RG PG+ G PG RG PG G G K GP G + E
Sbjct: 503 KGPAG-ERGGPGPAGPRGAPGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGE 559
Query: 167 RA-PG 170
PG
Sbjct: 560 SGRPG 564
Score = 107 (42.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 48/126 (38%), Positives = 54/126 (42%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG + E GP G GP G G PG K E GP PG RGP G G
Sbjct: 365 PGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPG-APGLIGARGPPGPPGTNG 423
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERG-------PGDKEERGQ----GDKEKRG-PGDKE 165
PG + G PG +G PG + ERG PG K E G+ G+ G PG
Sbjct: 424 APGQRGGAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAG 483
Query: 166 ER-APG 170
ER APG
Sbjct: 484 ERGAPG 489
Score = 102 (41.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 281 PGLKGENGLPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G G G G PG K E
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEM 398
Query: 168 APGGL 172
P G+
Sbjct: 399 GPAGI 403
Score = 101 (40.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 41/105 (39%), Positives = 47/105 (44%)
Query: 73 PG-DKEKRGPGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRGPGDKEKRGP 129
PG D G GD+ E G PG G PG GP K GD+ + GP P
Sbjct: 1022 PGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKS----GDRGETGPAGPSG-AP 1076
Query: 130 GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPG 170
G RGP G + RG G+ ERG G K RG PG+ APG
Sbjct: 1077 GPAGSRGPPGPQGPRGDKGETGERGLNGIKGHRGFPGNPG--APG 1119
Score = 49 (22.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K ERG PG+K GP
Sbjct: 821 PGAKGERGAPGEKGEGGP 838
Score = 47 (21.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 225 GPAGKDGESGRPGRPGERGLPGPPGMKGP 253
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 6 GERASDKEERG-PGDKEERGP 25
GE + K ERG PG+K E GP
Sbjct: 819 GEPGA-KGERGAPGEKGEGGP 838
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
+Q GER GPG K ++G PG A G
Sbjct: 724 LQGMPGERGGPG---GPGPKGDKGEPGSAGADG 753
Score = 42 (19.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 6 GERASDKEERGPGDKEERG-PGD 27
GE+ E GPG RG PG+
Sbjct: 501 GEKGPAGERGGPGPAGPRGAPGE 523
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGER PG K E G PG+ A G
Sbjct: 446 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 477
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 588 GAPGKNGERGGPGGPGPQGPAGKNGETGP 616
Score = 39 (18.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPG 312
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 16 GPGDKEERGP 25
GPG++ E GP
Sbjct: 796 GPGERGEHGP 805
Score = 37 (18.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE S + PG RGP G GP
Sbjct: 743 KGEPGSAGADGAPGKDGPRGPTGPIGPPGP 772
>UNIPROTKB|F1PG69 [details] [associations]
symbol:COL3A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GeneTree:ENSGT00660000095287 OMA:EGSPGHP
EMBL:AAEX03017880 Ensembl:ENSCAFT00000023503 Uniprot:F1PG69
Length = 1467
Score = 129 (50.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 51/127 (40%), Positives = 56/127 (44%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG----PGDK 116
PG RG PG+ + G PG RG PG GPG K GP G + E G PG
Sbjct: 512 PGPAGPRGAPGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 117 EKRG-------PGDKEKRG-PGDKEERG-PGDKEERGPGDKE-ERG-QGDKEKRGP-GDK 164
RG PG K G PG ERG PG +GP K E G QG GP GDK
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPAGDK 629
Query: 165 EERAPGG 171
+ P G
Sbjct: 630 GDAGPPG 636
Score = 127 (49.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 65 PGDKE-ERGPGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGD 115
PG++ GPG K +G PG G PG RGP G G PGDK E G PG
Sbjct: 730 PGERGGPGGPGPKGDKGEPGSAGADGAPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGL 789
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
GP + GPG++ E GP PG + G+ G K +RG PG+K E P G+
Sbjct: 790 PGIAGP----RGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKGEGGPPGV 843
Score = 117 (46.2 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 47/120 (39%), Positives = 54/120 (45%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 778 PGDKGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKG 836
Query: 118 KRGPGDKE--KRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ GP G G GP G K ERG PG G G + GP G+ P G
Sbjct: 837 EGGPPGVAGPPGGAGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPG 896
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 49/125 (39%), Positives = 56/125 (44%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP-GDKEE 110
PG + ERG PG K + G PG+ G PG ERG PG R G G E
Sbjct: 443 PGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGANGLPGE 502
Query: 111 RGPGDKEKRGPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP-GDKEE 166
+GP E+ GPG RG PG+ G PG RG PG G G K GP G + E
Sbjct: 503 KGPAG-ERGGPGPAGPRGAPGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGE 559
Query: 167 RA-PG 170
PG
Sbjct: 560 SGRPG 564
Score = 107 (42.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 48/126 (38%), Positives = 54/126 (42%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG + E GP G GP G G PG K E GP PG RGP G G
Sbjct: 365 PGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPG-APGLIGARGPPGPPGTNG 423
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERG-------PGDKEERGQ----GDKEKRG-PGDKE 165
PG + G PG +G PG + ERG PG K E G+ G+ G PG
Sbjct: 424 APGQRGGAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAG 483
Query: 166 ER-APG 170
ER APG
Sbjct: 484 ERGAPG 489
Score = 102 (41.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 281 PGLKGENGLPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G G G G PG K E
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEM 398
Query: 168 APGGL 172
P G+
Sbjct: 399 GPAGI 403
Score = 101 (40.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 41/105 (39%), Positives = 47/105 (44%)
Query: 73 PG-DKEKRGPGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRGPGDKEKRGP 129
PG D G GD+ E G PG G PG GP K GD+ + GP P
Sbjct: 1024 PGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKS----GDRGETGPAGPSG-AP 1078
Query: 130 GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPG 170
G RGP G + RG G+ ERG G K RG PG+ APG
Sbjct: 1079 GPAGSRGPPGPQGPRGDKGETGERGLNGIKGHRGFPGNPG--APG 1121
Score = 49 (22.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K ERG PG+K GP
Sbjct: 823 PGAKGERGAPGEKGEGGP 840
Score = 47 (21.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 225 GPAGKDGESGRPGRPGERGLPGPPGMKGP 253
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 6 GERASDKEERG-PGDKEERGP 25
GE + K ERG PG+K E GP
Sbjct: 821 GEPGA-KGERGAPGEKGEGGP 840
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
+Q GER GPG K ++G PG A G
Sbjct: 726 LQGMPGERGGPG---GPGPKGDKGEPGSAGADG 755
Score = 42 (19.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 6 GERASDKEERGPGDKEERG-PGD 27
GE+ E GPG RG PG+
Sbjct: 501 GEKGPAGERGGPGPAGPRGAPGE 523
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGER PG K E G PG+ A G
Sbjct: 446 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 477
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 588 GAPGKNGERGGPGGPGPQGPAGKNGETGP 616
Score = 39 (18.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPG 312
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 16 GPGDKEERGP 25
GPG++ E GP
Sbjct: 798 GPGERGEHGP 807
Score = 37 (18.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE S + PG RGP G GP
Sbjct: 745 KGEPGSAGADGAPGKDGPRGPTGPIGPPGP 774
>UNIPROTKB|I3LS72 [details] [associations]
symbol:COL6A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 GO:GO:0005576 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 GeneTree:ENSGT00530000063022
Ensembl:ENSSSCT00000024347 OMA:KDRYYRC Uniprot:I3LS72
Length = 435
Score = 124 (48.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 47/117 (40%), Positives = 58/117 (49%)
Query: 65 PG-DKEERGPGDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERG-PGDKEKR 119
PG D + PG K G G K E+G PG E G PG+ PGD+ E G PG +
Sbjct: 318 PGFDGVQGPPGPKGDAGAFGLKGEKGEPGADGEPGRPGNTGP--PGDEGEPGEPGPPGGK 375
Query: 120 GP-GDKEKRGP-GDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
G GD+ GP G ERG PG++ RG PG + RG G E GD+ P G+
Sbjct: 376 GEAGDEGNPGPDGAPGERGGPGERGPRGTPGVRGPRG-GPGEAGPQGDQGREGPVGV 431
Score = 39 (18.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 6 GERAS--DKEERGP-GDKEERG 24
GE+ S +K RGP G K E+G
Sbjct: 271 GEKGSRGEKGSRGPKGYKGEKG 292
>UNIPROTKB|F1PIP7 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:AAEX03012233 Ensembl:ENSCAFT00000019781 Uniprot:F1PIP7
Length = 2936
Score = 147 (56.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/115 (43%), Positives = 61/115 (53%)
Query: 71 RGP-GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGP----GDKEERGPGDKEKRGPG 122
RGP G+K +G PG+ G PG GP GDR + GP G + G G EK PG
Sbjct: 1662 RGPVGEKGDQGDPGEDGRNGSPGPS---GPKGDRGEPGPPGLPGRLVDSGLGAGEKGEPG 1718
Query: 123 DKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
D+ + GP G K + GP G ERG G + G QGD RGP G+K +R P GL
Sbjct: 1719 DRGQEGPRGPKGDPGPPGASGERGVSGLRGPPGPQGDPGVRGPTGEKGDRGPPGL 1773
Score = 131 (51.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 44/117 (37%), Positives = 55/117 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG 120
PG + G G EK PGD+ + GP G K + GP G +RG G + GP GD RG
Sbjct: 1701 PGRLVDSGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGLRGPPGPQGDPGVRG 1760
Query: 121 P-GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ----GDKEKRG-PGDKEERAPGG 171
P G+K RGP + R D + PG G GD + G PG + E P G
Sbjct: 1761 PTGEKGDRGPPGLDGRSGLDGKPGAPGPPGPHGATGKAGDPGRDGLPGLRGEHGPPG 1817
Score = 130 (50.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 46/116 (39%), Positives = 56/116 (48%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGPGDREKRGPGDKEERGP-GDKEK 118
GD E G G GP GD+ E GP G + G G EK PGD+ + GP G K
Sbjct: 1672 GDPGEDGRNGSPGPSGPKGDRGEPGPPGLPGRLVDSGLGAGEKGEPGDRGQEGPRGPKGD 1731
Query: 119 RGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPG 170
GP G +RG G + GP GD RGP G+K +RG + R D + APG
Sbjct: 1732 PGPPGASGERGVSGLRGPPGPQGDPGVRGPTGEKGDRGPPGLDGRSGLDGKPGAPG 1787
Score = 129 (50.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 49/126 (38%), Positives = 62/126 (49%)
Query: 65 PGDKEERG-PGDKEKRGP-------GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP 113
PG+K + G PG GP G+K + GP GD G G+R RG PG RGP
Sbjct: 1608 PGEKGDPGRPGSPGPIGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPG---ARGP 1664
Query: 114 -GDKEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRGPGDKE 165
G+K +G PG+ + G PG GP GD+ E GP G + G G EK PGD+
Sbjct: 1665 VGEKGDQGDPGEDGRNGSPGPS---GPKGDRGEPGPPGLPGRLVDSGLGAGEKGEPGDRG 1721
Query: 166 ERAPGG 171
+ P G
Sbjct: 1722 QEGPRG 1727
Score = 127 (49.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 65/187 (34%), Positives = 75/187 (40%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
RGE E+ PG + RG G +RG
Sbjct: 2467 RGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAGTSGLKGDKGDAALAMGAPGPRG 2526
Query: 64 XPGDKEERG-PG---DKEKRG----PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERG 112
GD ERG PG DK RG PG+K +G PGDK G G R GP G+ G
Sbjct: 2527 AKGDMGERGLPGIDGDKGPRGDTGNPGEKGTKGEPGDKGSAGLLGARGLTGPKGEPGAAG 2586
Query: 113 -PGDKEKRGPGDKEKRG-PGDKEERGPGDKEERGP-GDKEERG-QG----DKEKRGPGDK 164
PGD PG K G PG + ++G D GP G K ERG +G D EK GDK
Sbjct: 2587 IPGD-----PGSPGKDGTPGVRGDKG--DTGFMGPRGLKGERGVKGACGLDGEK---GDK 2636
Query: 165 EERAPGG 171
E P G
Sbjct: 2637 GEGGPPG 2643
Score = 125 (49.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 49/121 (40%), Positives = 62/121 (51%)
Query: 66 GDKEERGP-GDKEKRGP-GDKE---ERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD +RGP G + GP GD E+G PG GP G R + G G+K + GP GD
Sbjct: 1585 GDPGDRGPIGLSGRAGPPGDSGPPGEKGDPGRPGSPGPIGPRGRDGEVGEKGDEGPPGDP 1644
Query: 117 EKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
G G++ RG PG RGP G+K ++G PG E+ G GP GD+ E P G
Sbjct: 1645 GLPGKAGERGLRGAPG---ARGPVGEKGDQGDPG--EDGRNGSPGPSGPKGDRGEPGPPG 1699
Query: 172 L 172
L
Sbjct: 1700 L 1700
Score = 124 (48.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 46/118 (38%), Positives = 59/118 (50%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP---GDKEERGPGDREKRG-PGDKEERGP-GDKEK 118
PG + G PG K GD+ ERGP GD PG+ G PG +GP G +
Sbjct: 1382 PGPRGPPGLPGTAVKGDKGDRGERGPPGPGDGST-APGEPGLPGLPGSPGPQGPVGPSGE 1440
Query: 119 RGP-GDKEKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEER-APG 170
+G GD E PG + G PG++ RGP GD +G +G K G G+K ER +PG
Sbjct: 1441 KGEKGDCEDGAPGLPGQPGSPGEQGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGSPG 1498
Score = 123 (48.4 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 48/116 (41%), Positives = 58/116 (50%)
Query: 66 GDKEERG---PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRGP-GDKEERG-PG 114
GDK + G PG + +RG PG + E G PG + RG PG R +RG GD G G
Sbjct: 2451 GDKGDSGVGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAGTSGLKG 2510
Query: 115 DKEKRG--PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQGDKEKRG-PGDK 164
DK G RG GD ERG PG ++GP GD G+K +G PGDK
Sbjct: 2511 DKGDAALAMGAPGPRGAKGDMGERGLPGIDGDKGPRGDTGN--PGEKGTKGEPGDK 2564
Score = 122 (48.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 52/132 (39%), Positives = 65/132 (49%)
Query: 66 GDKEERGPGDKEKRG-PGDKEERGP-GD---KEERGP-------GDREKRG-PGDKEERG 112
GD E+ PG + G PG++ RGP GD K +RGP G++ +RG PG +G
Sbjct: 1445 GDCEDGAPGLPGQPGSPGEQGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGSPGPVGPQG 1504
Query: 113 -PGDKEKRGP-GDKEKRGP----GDKEERG-PGDKE--ERGPGDKEERGQ-GDKEKRGP- 161
PG + G G + GP G+K E G PGD G G K E+G G RG
Sbjct: 1505 LPGVAGRPGAEGPEGPPGPVGRRGEKGEPGRPGDPAVGPDGTGAKGEKGDVGPTGPRGAA 1564
Query: 162 GDKEERAPGGLV 173
G K ER P GLV
Sbjct: 1565 GVKGERGPPGLV 1576
Score = 121 (47.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 49/121 (40%), Positives = 62/121 (51%)
Query: 65 PGDKEERGP-GDKEKRG----PGDKEERGP-GDK---EERGPGDREKRGP-GDKEERG-P 113
PG++ ERG G++ ++G PG GP G K +E GPG +GP G K +G P
Sbjct: 2053 PGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDEPGPGLSGVQGPPGFKGAKGEP 2112
Query: 114 GDKEKRGPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERA-P 169
G +GP K RG PG K +RG PG K G PG ERG E + PG + R P
Sbjct: 2113 GSDGDQGP--KGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPEGK-PGLQGPRGTP 2169
Query: 170 G 170
G
Sbjct: 2170 G 2170
Score = 119 (46.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 43/116 (37%), Positives = 56/116 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG 120
G+K + GP GD PG ERG G RGP G++ +G PG+ G PG +G
Sbjct: 1633 GEKGDEGPPGDPGL--PGKAGERGLRGAPGARGPVGEKGDQGDPGEDGRNGSPGPSGPKG 1690
Query: 121 P-GDKEKRG-PGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
G+ G PG + G G E+ PGD+ + G +G K GP G ER GL
Sbjct: 1691 DRGEPGPPGLPGRLVDSGLGAGEKGEPGDRGQEGPRGPKGDPGPPGASGERGVSGL 1746
Score = 115 (45.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 49/120 (40%), Positives = 58/120 (48%)
Query: 66 GDKEERGP-------GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPG 114
GDK E GP G K G PG + G PG + GP GDR G PG K ++G
Sbjct: 2634 GDKGEGGPPGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGSKGDQG-- 2691
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
+K +RGP G GP G+ GP G GP E QG K +RGP G+K APG
Sbjct: 2692 EKGERGPPGIGGFPGPRGNDGSSGPPGPPGSVGPKGPEGL-QGQKGERGPPGEKMVGAPG 2750
Score = 112 (44.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 47/115 (40%), Positives = 55/115 (47%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG + GP GD+ G PG K ++G +K ERGP G GP G+ GP G
Sbjct: 2666 PGKEGLIGPKGDRGFDGQPGSKGDQG--EKGERGPPGIGGFPGPRGNDGSSGPPGPPGSV 2723
Query: 120 GPGDKEKRGPGDKEERGP-GDK---EERGPGDKEERG-QGDKEKRGP-GDKEERA 168
GP E G K ERGP G+K PG ERG QG GP G+K E A
Sbjct: 2724 GPKGPEGL-QGQKGERGPPGEKMVGAPGAPGTPGERGEQGRPGPAGPRGEKGEAA 2777
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/127 (37%), Positives = 58/127 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-----PGDKEERGP-GDREKRG-PGDKEERG--- 112
PG + ERG GD G GDK + PG + +G G+R G GDK RG
Sbjct: 2491 PGSRGERGEKGDAGTSGLKGDKGDAALAMGAPGPRGAKGDMGERGLPGIDGDKGPRGDTG 2550
Query: 113 -PGDKEKRG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKE 165
PG+K +G PGDK G G + GP G+ G PGD G+ G RG GD
Sbjct: 2551 NPGEKGTKGEPGDKGSAGLLGARGLTGPKGEPGAAGIPGDPGSPGKDGTPGVRGDKGDTG 2610
Query: 166 ERAPGGL 172
P GL
Sbjct: 2611 FMGPRGL 2617
Score = 110 (43.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 46/121 (38%), Positives = 57/121 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
PG E G PG + G G K+ GD+ G PG GP G K E G PG
Sbjct: 2240 PGQVGETGKPGAPGRDGAGGKD----GDRGAPGVPGSPGLPGPVGPKGEPGQTGTPGQAV 2295
Query: 118 KRGPGDK-EKRGPGDK--EERG-PGDKEERG-PGDKEERGQGDK--EKRGPG-DKEERAP 169
PG K EK PG + G PG K +RG PG + E+G+ + E PG D ++ AP
Sbjct: 2296 VGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAP 2355
Query: 170 G 170
G
Sbjct: 2356 G 2356
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 42/115 (36%), Positives = 55/115 (47%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRGP 121
P + RGP GD +RGP KE GP G ERG G+R GP G++ GP
Sbjct: 1968 PMPERRRGPKGDPGERGPPGKE--GPIGFSGERGLKGERGDPGPQGPPGLALGERGPPGP 2025
Query: 122 ----GDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPG 170
G+ K G PG G G E PG++ ERG+ G++ ++G D PG
Sbjct: 2026 PGLAGEPGKPGIPGLPGRAG-GAGEAGRPGERGERGEKGERGEQGR-DGPPGLPG 2078
Score = 106 (42.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 47/120 (39%), Positives = 54/120 (45%)
Query: 73 PGDKEKRG----PGDKEERG----PGDKEERGPGDREKRGP----GDKEERGP-GDKEKR 119
PG RG PG ERG PG E PG GP G GP GDK
Sbjct: 2399 PGQTGPRGEMGQPGPSGERGLAGLPG--REGPPGPLGPPGPPGSTGVPGASGPKGDKGDS 2456
Query: 120 G---PGDKEKRG-PGDKEERG-PGDKEERG----PGDKEERGQ-GDKEKRG-PGDKEERA 168
G PG + +RG PG + E G PG + RG PG + ERG+ GD G GDK + A
Sbjct: 2457 GVGLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDAGTSGLKGDKGDAA 2516
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 44/115 (38%), Positives = 50/115 (43%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERG----PGDKEERG-PGDREKRGP-GDKEERGPGDKE 117
G+ ERGP G K + G PG G PG K + G PG RGP GD RGP
Sbjct: 1332 GETGERGPRGPKGEPGEPGRVIGGGGPGLPGQKGDPGLPGLPGSRGPLGDPGPRGPPGL- 1390
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
PG K GD+ ERGP GPGD G+ G PG + P G
Sbjct: 1391 ---PGTAVKGDKGDRGERGPP-----GPGDGST-APGEPGLPGLPGSPGPQGPVG 1436
Score = 103 (41.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 48/126 (38%), Positives = 55/126 (43%)
Query: 65 PGDKEERGPGDKE-KRG----PGDKEERGP-GDKEERG----PGDREKRGPGDKEERG-P 113
PG G G K+ RG PG GP G K E G PG PG K E+G P
Sbjct: 2249 PGAPGRDGAGGKDGDRGAPGVPGSPGLPGPVGPKGEPGQTGTPGQAVVGPPGAKGEKGAP 2308
Query: 114 GDK--EKRG-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ----GDKEKRG-PGDK 164
G + G PG K RG PG + E+G + PGD E GQ G K +G PG
Sbjct: 2309 GGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGE-PGDPGEDGQKGAPGLKGNKGDPGVG 2367
Query: 165 EERAPG 170
E PG
Sbjct: 2368 VEGPPG 2373
Score = 101 (40.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 46/123 (37%), Positives = 60/123 (48%)
Query: 66 GDKEERGP----GDKEKRG-PGDKEERGPGDKEERGPGDREKRGP-GDKEERG----PGD 115
G++ GP G+ K G PG G G E PG+R +RG G++ E+G PG
Sbjct: 2018 GERGPPGPPGLAGEPGKPGIPGLPGRAG-GAGEAGRPGERGERGEKGERGEQGRDGPPGL 2076
Query: 116 KEKRGP-GDK---EKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRG-PGDKEERA 168
GP G K ++ GPG +GP G K +G PG + QG K RG PG K +R
Sbjct: 2077 PGPPGPPGPKVAVDEPGPGLSGVQGPPGFKGAKGEPGSDGD--QGPKGDRGMPGIKGDRG 2134
Query: 169 -PG 170
PG
Sbjct: 2135 EPG 2137
Score = 48 (22.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 2 QACRGERASD-----KEERG-PGDKEERG-PGDKKARG 32
+ +GE SD K +RG PG K +RG PG K G
Sbjct: 2106 KGAKGEPGSDGDQGPKGDRGMPGIKGDRGEPGQKGLDG 2143
Score = 47 (21.6 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 12 KEERGP-GDKEERGPGDKKARGP 33
+ RGP GD ERGP K+ GP
Sbjct: 1971 ERRRGPKGDPGERGPPGKE--GP 1991
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PGD+ + GP G K GP
Sbjct: 1713 EKGEPGDRGQEGPRGPKGDPGP 1734
Score = 41 (19.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 16 GPGDKEERGPGDKKARGP 33
G G+K E PGD+ GP
Sbjct: 1710 GAGEKGE--PGDRGQEGP 1725
Score = 40 (19.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RG + D ERGP KE GP G RG
Sbjct: 1974 RGPKG-DPGERGPPGKE--GPIGFSGERG 1999
Score = 39 (18.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG+ ++G PG K +G
Sbjct: 2334 KGEAGRAGEPGDPGEDGQKGAPGLKGNKG 2362
Score = 38 (18.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 16 GP-GDKEERGPGDKKARG 32
GP GDK + G G ARG
Sbjct: 2448 GPKGDKGDSGVGLPGARG 2465
Score = 36 (17.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ D ++ PG K +G GP
Sbjct: 2344 GDPGEDGQKGAPGLKGNKGDPGVGVEGP 2371
Score = 35 (17.4 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 17 PGDKEERGPGDKKARGP 33
PG + GD+ RGP
Sbjct: 1391 PGTAVKGDKGDRGERGP 1407
>UNIPROTKB|F1MAL9 [details] [associations]
symbol:Col1a1 "Collagen alpha-1(I) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 RGD:61817 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 IPI:IPI00476804
Ensembl:ENSRNOT00000029673 ArrayExpress:F1MAL9 Uniprot:F1MAL9
Length = 1226
Score = 122 (48.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 44/109 (40%), Positives = 50/109 (45%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGP----G 114
PGDK E GP G RG PGD+ E GP G GP PG GP G
Sbjct: 767 PGDKGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPPGAPGAPGAPGPVGPAGKNG 826
Query: 115 DKEKRGPGDKEKRGP-GDKEERGPGDKEERGP-GDKEERG-QGDKEKRG 160
D+ + GP GP G RGP + GP GDK E G QGD+ +G
Sbjct: 827 DRGETGPAGPA--GPIGPAGARGPAGPQ--GPRGDKGETGEQGDRGIKG 871
Score = 111 (44.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 49/125 (39%), Positives = 55/125 (44%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 197 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 254
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERA 168
RG G K GP G K E PG E G PG RG G++ + GP G R
Sbjct: 255 GHRGFSGLDGAKGDTGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGPPGSAGARG 312
Query: 169 PGGLV 173
G V
Sbjct: 313 NDGAV 317
Score = 109 (43.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 581 PGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 640
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 641 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGNNG-APG 693
Score = 99 (39.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 44/117 (37%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
PG GP G+ G PG K G PG G PG R GP PG K G
Sbjct: 365 PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP-QGPSGAPGPKGNSG 423
Query: 121 -PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERA-PG 170
PG +G G K E GP G + GP G++ +RG +G+ G PG ER PG
Sbjct: 424 EPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPG 480
Score = 99 (39.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 47/125 (37%), Positives = 54/125 (43%)
Query: 65 PGDKEERG----PGDKEKRG----PGDKEERG-PGDKEERGPGDREKRG-PGDKEERGP- 113
PG RG PG+ +G PG +G PG + PG+R G PG K +RG
Sbjct: 680 PGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPG--LQGMPGERGAAGLPGPKGDRGDA 737
Query: 114 GDKEKRG-PGDKEKRG---P-GDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEE 166
G K G PG RG P G G PGDK E GP G RG PGD+ E
Sbjct: 738 GPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPA----GPTGARGAPGDRGE 793
Query: 167 RAPGG 171
P G
Sbjct: 794 PGPPG 798
Score = 97 (39.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 43/121 (35%), Positives = 55/121 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG----PGDKEERGPGDREKRGPGDKEERG-PGDKEK 118
G + ERG PG++ +GP G RG PG+ +G + PG +G PG +
Sbjct: 663 GARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKG----DTGAPGAPGSQGAPGLQGM 718
Query: 119 RGPGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPG 170
PG++ G PG K +RG G K G PG RG G G PGDK E P
Sbjct: 719 --PGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPS 776
Query: 171 G 171
G
Sbjct: 777 G 777
Score = 52 (23.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 216 GKNGDDGEAGKPGRPGERGPPGPQGARG 243
Score = 51 (23.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 275 KGEPGSPGENGAPGQMGPRGLPGERGRPGP 304
Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 642 GEAGKPGEQGVPGDLGAPGPSGARGERG 669
Score = 36 (17.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1 MQACRGERASDKEERG-PGDKEERGP-GDKKARG 32
+Q GER + G PG K +RG G K A G
Sbjct: 715 LQGMPGERGA----AGLPGPKGDRGDAGPKGADG 744
Score = 34 (17.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 16 GP-GDKEERG-PGDKKARGP 33
GP G G PGDK GP
Sbjct: 756 GPIGPPGPAGAPGDKGETGP 775
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 134 (52.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/102 (33%), Positives = 65/102 (63%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KEE+ +KE++ +KEE+ +KEE+ ++E++ +KEE+ +KE++ +K++
Sbjct: 752 EKEEKKRKEKERK---EKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKERKENEEKKR 808
Query: 127 RGPGDKEERGPGDKEERGPGDKE--ERGQGDKEKRGPGDKEE 166
+ +KEE+ +KEER +KE E+ + +KE+R +KEE
Sbjct: 809 K---EKEEKERKEKEEREKQEKEREEKEKQEKEERERKEKEE 847
Score = 128 (50.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 28/101 (27%), Positives = 63/101 (62%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KEE+ +KE++ +++E +++E+ R+++ +KEE+ +KE++ +KE+
Sbjct: 725 EKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEE 784
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ +KEE+ D++E+ + EE+ + +KE++ +KEER
Sbjct: 785 KKRKEKEEK---DRKEKERKENEEKKRKEKEEKERKEKEER 822
Score = 126 (49.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 25/101 (24%), Positives = 63/101 (62%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+++ER +K+++ +KEE+ +KEE+ +R++ +++E+ ++++ +KE+
Sbjct: 709 EEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEE 768
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ +KEE+ +KEE+ +KEE+ + +KE++ +K+ +
Sbjct: 769 KERKEKEEKEIKEKEEKKRKEKEEKDRKEKERKENEEKKRK 809
Score = 125 (49.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 27/101 (26%), Positives = 63/101 (62%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+E+ +KE++ +KEE+ +++E +R+++ ++E+ +KE++ +KE+
Sbjct: 717 EKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEE 776
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ +KEE+ +KEE+ +KE R + +++KR +++ER
Sbjct: 777 KEIKEKEEKKRKEKEEKDRKEKE-RKENEEKKRKEKEEKER 816
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/102 (24%), Positives = 62/102 (60%)
Query: 67 DKEE-RGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
+KE+ R +K+K +++ER +K+E+ ++E++ +KEE+ ++++ +++
Sbjct: 692 EKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERK 751
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
++ ++E+ +KEE+ +KEE+ +KE++ +KEE+
Sbjct: 752 EKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEK 793
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/102 (23%), Positives = 62/102 (60%)
Query: 67 DKEERGPGDKEK-RGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
+KE+ +KEK R +K++ +++ER +++++ +KEE+ +KE++ +++
Sbjct: 684 EKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERK 743
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ +++E+ ++E+ +KEE+ + +KE++ +KEE+
Sbjct: 744 ENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEK 785
Score = 105 (42.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 24/101 (23%), Positives = 59/101 (58%)
Query: 68 KEERGPGDKEKRGPGDKEE-RGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
KE+ +KEK +KE+ R +K++ + ++R +K+E+ +KE++ +KE+
Sbjct: 677 KEKEKEKEKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEE 736
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+ +++E +++E+ ++E+ + +KE++ +KEE+
Sbjct: 737 KEEKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEK 777
Score = 105 (42.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 28/104 (26%), Positives = 59/104 (56%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K ER +KEK +KE+ +K+ R +++K +++ER +K+++ +KE+
Sbjct: 670 EKLEREKKEKEKEKEKEKEKEKEKEKK-RIEKEKKKIRENEEKERKQKEKDEKKRKEKEE 728
Query: 127 RGPGDKEERGPGDK---EERGPGDKEERGQGDKEKRGPGDKEER 167
+ +KEE+ ++ EE +KEE+ + +KE++ +KE +
Sbjct: 729 KDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEEKERK 772
Score = 104 (41.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/99 (27%), Positives = 56/99 (56%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ KEK +++ + +K ER ++EK +KE+ +K KR +K+K
Sbjct: 647 KKEKENKLKEKEKKEEEKRKEEKEKLEREKKEKEKEKEKEKEKEKEKEK-KRIEKEKKKI 705
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+++ER +K+E+ +KEE+ + +KE++ +++E
Sbjct: 706 RENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKE 744
Score = 100 (40.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 23/100 (23%), Positives = 58/100 (58%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
KE+ +++++ +K ER +KE+ ++EK +K+ R +K+K ++++R
Sbjct: 655 KEKEKKEEEKRKEEKEKLEREKKEKEKEKEKEKEKEKEKEKK-RIEKEKKKIRENEEKER 713
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+K+E+ +KEE+ +KEE+ + ++++ +++E+
Sbjct: 714 KQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEK 753
Score = 41 (19.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 9 ASDKEERGPGDKEERGPGDKKA 30
+ +EE PG +EE KKA
Sbjct: 468 SESEEESEPGSEEESEEESKKA 489
Score = 39 (18.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
++ +KEE+ +KEE+ ++K
Sbjct: 721 KKRKEKEEKDRKEKEEKEEKERK 743
Score = 34 (17.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 8 RASDKEERGPGDKEERGPGDKKAR 31
+ +K+E+ +KEE+ +K+ +
Sbjct: 714 KQKEKDEKKRKEKEEKDRKEKEEK 737
Score = 33 (16.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 8 RASDKEERGPGDKEERGPGDKKAR 31
R ++++ER +K+E+ +K+ +
Sbjct: 706 RENEEKERKQKEKDEKKRKEKEEK 729
>UNIPROTKB|P04258 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9913
"Bos taurus" [GO:0005581 "collagen" evidence=IEA] PROSITE:PS01208
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
HOGENOM:HOG000085654 HOVERGEN:HBG004933 IPI:IPI00731432 PIR:A02862
UniGene:Bt.64714 STRING:P04258 PRIDE:P04258 Uniprot:P04258
Length = 1049
Score = 131 (51.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 49/119 (41%), Positives = 56/119 (47%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEK 118
PG RGP G G PGDK E G PG GP + GPG++ E+GP
Sbjct: 599 PGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGP----RGGPGERGEQGPPGPAG 654
Query: 119 RGPGDKEKRG-PGDKEERG-PGDKEERGPGDKE--ERGQGDKEKRGP-GDKEER-APGG 171
PG + G PG K ERG PG+K E GP G G GP G K ER +PGG
Sbjct: 655 F-PGAPGQNGEPGAKGERGAPGEKGEGGPPGAAGPAGGSGPAGPPGPQGVKGERGSPGG 712
Score = 121 (47.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/117 (39%), Positives = 52/117 (44%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG 120
G+ G PG RG PG GPG + GP G + + G PG GP G G
Sbjct: 366 GEPGRNGLPGGPGLRGIPGSPG--GPGSNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMG 423
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERGPGDKE-ERG-QGDKEKRGP-GDKEERAPGG 171
PG K G PG ERG PG +GP K E G QG GP GDK + P G
Sbjct: 424 FPGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPG 480
Score = 108 (43.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/110 (38%), Positives = 49/110 (44%)
Query: 73 PGDKEKRGP-GDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEKRGP-GDKEK 126
PG RGP G G PG + G PG +G PG + ERG G GP G+ K
Sbjct: 251 PGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGK 310
Query: 127 RG-PGDKEERG-PGDKEERG-PGDKEERGQGDK--EKRGPGDKEERAPGG 171
G PG+ G PG ERG PG + G EK PGD+ P G
Sbjct: 311 DGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAG 360
Score = 104 (41.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 41/106 (38%), Positives = 50/106 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGPGDKEERG-PGDKEKR 119
PG+ G PG +RG PG + G G E+GP GDR GPG RG G+ +
Sbjct: 314 PGEPGANGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRG--GPGPAGPRGVAGEPGRN 371
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGP 161
G PG RG PG GPG + GP G + E G+ G GP
Sbjct: 372 GLPGGPGLRGIPGSPG--GPGSNGKPGPPGSQGETGRPGPPGSPGP 415
Score = 104 (41.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 46/121 (38%), Positives = 55/121 (45%)
Query: 65 PGDKEERGPGDKE-KRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGPGDKEKR 119
PG +GP K + GP G GP GDK + GP G + +G PG PG+ K
Sbjct: 443 PGGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGP--PGENGKP 500
Query: 120 G-PGDKEKRG----PGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPG 170
G PG K + G PG K + G PG ERGP G G +G GP G K P
Sbjct: 501 GEPGPKGEAGAPGIPGGKGDSGAPG---ERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPP 557
Query: 171 G 171
G
Sbjct: 558 G 558
Score = 102 (41.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 45/121 (37%), Positives = 53/121 (43%)
Query: 73 PGDKEKRG-PGDKEERG----PGDKEERG-PGDREKRG----PGDKEERGP----GDKEK 118
PG+ K G PG K E G PG K + G PG+R G PG + GP G K
Sbjct: 494 PGENGKPGEPGPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGA 553
Query: 119 RGP-GDKEKRG-PGDK----EERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPG 170
GP G G PG + E GPG GPG K ++G+ G G PG R P
Sbjct: 554 AGPPGPPGSAGTPGLQGMPGERGGPG-----GPGPKGDKGEPGSSGVDGAPGKDGPRGPT 608
Query: 171 G 171
G
Sbjct: 609 G 609
Score = 41 (19.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 432 GAPGKNGERGGPGGPGPQGPAGKNGETGP 460
Score = 41 (19.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E+ PG RG PG++ G
Sbjct: 128 KGENGVPGEDGAPGPMGPRGAPGERGRPG 156
Score = 41 (19.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
+Q GER GPG K ++G PG G
Sbjct: 568 LQGMPGERGGPG---GPGPKGDKGEPGSSGVDG 597
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE + + PG + ERG G GP
Sbjct: 276 GEPGKNGAKGDPGPRGERGEAGSPGIAGP 304
Score = 36 (17.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ + GPG RG + R
Sbjct: 345 GEKGPPGDRGGPGPAGPRGVAGEPGR 370
>UNIPROTKB|F1MTS7 [details] [associations]
symbol:CNGB1 "Cyclic nucleotide-gated cation channel
beta-1" species:9913 "Bos taurus" [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0043855 "cyclic nucleotide-gated ion
channel activity" evidence=IEA] [GO:0033365 "protein localization
to organelle" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0045494
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0007602 InterPro:IPR018488
GeneTree:ENSGT00550000074376 IPI:IPI00714657 OMA:DTDADSC
EMBL:DAAA02046532 Ensembl:ENSBTAT00000032433 ArrayExpress:F1MTS7
Uniprot:F1MTS7
Length = 1386
Score = 148 (57.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE- 125
++EE+ G++E+ +KEE +KEE ++E+ KEE G +E+ G G+KE
Sbjct: 360 EEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEG-GEKED 418
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+ G +EE G G +EE G +EE G+G +E G ++E+
Sbjct: 419 EEGREKEEEEGRGKEEEEGGEKEEEEGRGKEEVEGREEEED 459
Score = 144 (55.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P +EE+ ++EK ++EE G +EE G E+ G +EE G KE+ G +
Sbjct: 351 PRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGE-KKEEEGREKE 409
Query: 125 EKRGPGDKE-ERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
E+ G G+KE E G +EE G G +EE G +E+ G G KEE
Sbjct: 410 EEEG-GEKEDEEGREKEEEEGRGKEEEEGGEKEEEEGRG-KEE 450
Score = 132 (51.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 83 DKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDKE- 141
++EE+ G++EE ++E+ +KEE +KE+ KE+ G +EE G G+KE
Sbjct: 360 EEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEG-GEKED 418
Query: 142 ERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
E G +EE G+G +E+ G G+KEE G
Sbjct: 419 EEGREKEEEEGRGKEEEEG-GEKEEEEGRG 447
Score = 121 (47.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 35/103 (33%), Positives = 51/103 (49%)
Query: 70 ERGPGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRG 128
E P D+EK ++ R P +EE+ + EK ++EE G +E+ G +E+ G
Sbjct: 331 EAAPADEEKGEVVEQTPRELPRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEG 390
Query: 129 PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+EE G KEE G +EE G G+KE +KEE G
Sbjct: 391 REKEEEEGE-KKEEEGREKEEEEG-GEKEDEEGREKEEEEGRG 431
Score = 34 (17.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 74 GDKEKRGPGDKEERGPG 90
G E P E+ GPG
Sbjct: 148 GSDEPSEPSRAEDPGPG 164
>UNIPROTKB|Q28181 [details] [associations]
symbol:CNGB1 "Cyclic nucleotide-gated cation channel
beta-1" species:9913 "Bos taurus" [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007608
"sensory perception of smell" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0007601 GO:GO:0050896
GO:GO:0007608 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
GO:GO:0030552 InterPro:IPR018488 EMBL:X89626 EMBL:X94707
EMBL:M61185 IPI:IPI00685390 IPI:IPI00707965 IPI:IPI00714657
IPI:IPI00914510 IPI:IPI00944418 IPI:IPI00944440 PIR:A40437
RefSeq:NP_001129112.1 RefSeq:NP_001129113.1 RefSeq:NP_851362.1
UniGene:Bt.5064 DisProt:DP00441 ProteinModelPortal:Q28181
STRING:Q28181 PRIDE:Q28181 GeneID:281702 KEGG:bta:281702 CTD:1258
eggNOG:NOG289446 HOGENOM:HOG000231425 HOVERGEN:HBG051038 KO:K04952
NextBio:20805625 Uniprot:Q28181
Length = 1394
Score = 148 (57.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE- 125
++EE+ G++E+ +KEE +KEE ++E+ KEE G +E+ G G+KE
Sbjct: 360 EEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEG-GEKED 418
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+ G +EE G G +EE G +EE G+G +E G ++E+
Sbjct: 419 EEGREKEEEEGRGKEEEEGGEKEEEEGRGKEEVEGREEEED 459
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P +EE+ ++EK ++EE G +EE G E+ G +EE G KE+ G +
Sbjct: 351 PRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGE-KKEEEGREKE 409
Query: 125 EKRGPGDKE-ERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
E+ G G+KE E G +EE G G +EE G +E+ G G KEE
Sbjct: 410 EEEG-GEKEDEEGREKEEEEGRGKEEEEGGEKEEEEGRG-KEE 450
Score = 132 (51.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 83 DKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDKE- 141
++EE+ G++EE ++E+ +KEE +KE+ KE+ G +EE G G+KE
Sbjct: 360 EEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEG-GEKED 418
Query: 142 ERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
E G +EE G+G +E+ G G+KEE G
Sbjct: 419 EEGREKEEEEGRGKEEEEG-GEKEEEEGRG 447
Score = 121 (47.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 35/103 (33%), Positives = 51/103 (49%)
Query: 70 ERGPGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRG 128
E P D+EK ++ R P +EE+ + EK ++EE G +E+ G +E+ G
Sbjct: 331 EAAPADEEKGKVVEQTPRELPRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEG 390
Query: 129 PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+EE G KEE G +EE G G+KE +KEE G
Sbjct: 391 REKEEEEGE-KKEEEGREKEEEEG-GEKEDEEGREKEEEEGRG 431
Score = 34 (17.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 74 GDKEKRGPGDKEERGPG 90
G E P E+ GPG
Sbjct: 148 GSDEPSEPSRAEDPGPG 164
>UNIPROTKB|E2R2K8 [details] [associations]
symbol:PPP1R10 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR003617
InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 SMART:SM00509 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 Gene3D:1.20.930.10
SUPFAM:SSF47676 CTD:5514 OMA:PPPHEHR GeneTree:ENSGT00530000063820
EMBL:AAEX03008197 RefSeq:XP_848400.1 Ensembl:ENSCAFT00000000645
Ensembl:ENSCAFT00000048295 GeneID:481705 KEGG:cfa:481705
NextBio:20856447 Uniprot:E2R2K8
Length = 940
Score = 132 (51.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 32/105 (30%), Positives = 38/105 (36%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G + GPG G G R GPG G G + GPG
Sbjct: 750 GHRPHEGPGGGMNSSSGHRPHEGPGGG--MGGGHRPHEGPGSSMGGGGGHRPHEGPGGGM 807
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G + GPG G G + G G G G + PG
Sbjct: 808 GSGSGHRPHEGPGSGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPG 852
Score = 131 (51.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 32/100 (32%), Positives = 37/100 (37%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G R GPG G G + GPG G G
Sbjct: 740 GPGGGMVGGGGHRPHEGPGGGMNSSSGHRPHEGPGGG--MGGGHRPHEGPGSSMGGGGGH 797
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ GPG G G + G G G G + PGG
Sbjct: 798 RPHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPGG 837
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/98 (31%), Positives = 37/98 (37%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG G G + GPG G + GPG G G + GPG G G +
Sbjct: 741 PGGGMVGGGGHRPHEGPGGGMNSSSGHRPHEGPGGG--MGGGHRPHEGPGSSMGGGGGHR 798
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPG 162
GPG G G + GPG G G + GPG
Sbjct: 799 PHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPG 836
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/106 (30%), Positives = 38/106 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 780 GHRPHEGPGSSMGGGGGHRPHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPGGGM 839
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G G + GPG G + + RGP E R G
Sbjct: 840 GAGGGHRPHEGPGHGGPHGHRPHDVPSHRGHDHRGPPPHEHRGHDG 885
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/98 (31%), Positives = 37/98 (37%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG G + GPG G G + GPG G G + GPG G G +
Sbjct: 757 PGGGMNSSSGHRPHEGPGGG--MGGGHRPHEGPGSSMGGGGGHRPHEGPGGGMGSGSGHR 814
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPG 162
GPG G G + GPG G G + GPG
Sbjct: 815 PHEGPGSGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPG 852
Score = 117 (46.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 28/98 (28%), Positives = 35/98 (35%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
G G + GPG G G + GPG G G + GPG G G + GPG
Sbjct: 778 GGGHRPHEGPGSSMGGGGGHRPHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPGG 837
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
G G + GPG G + + R P
Sbjct: 838 GMGAGGGHRPHEGPGHGGPHGHRPHDVPSHRGHDHRGP 875
Score = 114 (45.2 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 33/108 (30%), Positives = 39/108 (36%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG G G + GPG G G + GPG G G + GPG G G +
Sbjct: 787 PGSSMGGGGGHRPHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPGGGMGAGGGHR 846
Query: 125 EKRGPGDKEERG--PGD------KEERGPGDKEERGQGDKEKRGPGDK 164
GPG G P D + RGP E RG G G +
Sbjct: 847 PHEGPGHGGPHGHRPHDVPSHRGHDHRGPPPHEHRGHDGPGHGGGGHR 894
Score = 107 (42.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 37/115 (32%), Positives = 41/115 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 796 GHRPHEGPGGGMGSGSGHRPHEGPGSGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGG 855
Query: 126 KRG--PGD------KEERGPGDKEERG---PGDKE--ERGQGDKEKRGPGDKEER 167
G P D + RGP E RG PG RG G GD R
Sbjct: 856 PHGHRPHDVPSHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDGGHSHG-GDMSNR 909
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 674 RG-GDPFWDGPGDPMRGGP 691
Score = 36 (17.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + GPG G G + GP
Sbjct: 776 GMGGGHRPHEGPGSSMGGGGGHRPHEGP 803
Score = 35 (17.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 674 RGGDPFWDGPGDPMRGGP 691
>MGI|MGI:88462 [details] [associations]
symbol:Col7a1 "collagen, type VII, alpha 1" species:10090 "Mus
musculus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0010466 "negative regulation of peptidase
activity" evidence=IEA] [GO:0030414 "peptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 MGI:MGI:88462 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004867 SUPFAM:SSF49265 GO:GO:0007155
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0005604 EMBL:AC174646 MEROPS:I02.967 CTD:1294
HOGENOM:HOG000111866 HOVERGEN:HBG051053 KO:K16628 OMA:RRVCTTA
OrthoDB:EOG4J117P EMBL:U32107 EMBL:S63654 IPI:IPI00134652
PIR:A45748 RefSeq:NP_031764.2 UniGene:Mm.6200 HSSP:P12111
ProteinModelPortal:Q63870 SMR:Q63870 STRING:Q63870
PhosphoSite:Q63870 PaxDb:Q63870 PRIDE:Q63870
Ensembl:ENSMUST00000026740 Ensembl:ENSMUST00000112070 GeneID:12836
KEGG:mmu:12836 UCSC:uc009rrh.1 GeneTree:ENSGT00700000104250
InParanoid:Q63870 NextBio:282356 Bgee:Q63870 CleanEx:MM_COL7A1
Genevestigator:Q63870 Uniprot:Q63870
Length = 2944
Score = 138 (53.6 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 51/127 (40%), Positives = 61/127 (48%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG ERG G RGP G+K ++G PG+ G PG GP GD+ E GP G +
Sbjct: 1648 PGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGRNGSPGSS---GPKGDRGEPGPPGPPGR 1704
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG----------QGDKEKRGP-GDKE 165
E R G+ + GP G K + GP G ERG QGD RGP GDK
Sbjct: 1705 LVDAGIESRDKGEPGQEGPRGPKGDPGPPGVSGERGIDGLRGPPGPQGDPGVRGPAGDKG 1764
Query: 166 ERAPGGL 172
+R P GL
Sbjct: 1765 DRGPPGL 1771
Score = 124 (48.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/111 (39%), Positives = 51/111 (45%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
PG K + GP G RGP GD RGP PG K GD+ ERGP G G
Sbjct: 1362 PGKKGDPGPSGPPGSRGPVGDPGPRGPPGL----PGISVKGDKGDRGERGPPGP---GIG 1414
Query: 123 DKEKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
E+ PG G PG + G PG+K E+G D E GPG + P G
Sbjct: 1415 ASEQGDPGLPGLPGSPGPQGPAGRPGEKGEKG--DCEDGGPGLPGQPGPPG 1463
Score = 122 (48.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 46/118 (38%), Positives = 60/118 (50%)
Query: 66 GDKEERG---PGDKEKRG-PGDKEERG-PGDKEERG----PGDREKRGPGDKEERGP-GD 115
GDK + G PG + +RG PG + E G PG + RG PG R ++G +K G G
Sbjct: 2449 GDKGDPGAGLPGPRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQG--EKGAAGAAGL 2506
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGP----GDKEERGQ----GDKEKRG-PGDK 164
K +G + PG + +G D ERGP GDK RG+ GDK +G PGDK
Sbjct: 2507 KGDKGDSAVIEGPPGPRGAKG--DMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDK 2562
Score = 122 (48.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 45/115 (39%), Positives = 54/115 (46%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGPGDREKRGPGDKEERGP-GDKEK 118
GD E G G GP GD+ E GP G + G R+K PG + RGP GD
Sbjct: 1673 GDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGP 1732
Query: 119 RGPGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPG 170
PG +RG G + GP GD RGP GDK +RG + R D + APG
Sbjct: 1733 --PGVSGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPG 1785
Score = 119 (46.9 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 46/123 (37%), Positives = 59/123 (47%)
Query: 65 PGDKEERG-PGDKEKRGP----GDKEERGP-GDKEERG-PGDREKRG-PGDKEERGP-GD 115
PG+K E G PG GP G+ E+G G E G PG +RG G RGP G+
Sbjct: 1609 PGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGE 1668
Query: 116 KEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRGPGDKEERA 168
K +G PG+ + G PG GP GD+ E GP G + G ++K PG + R
Sbjct: 1669 KGDQGDPGEDGRNGSPGSS---GPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRG 1725
Query: 169 PGG 171
P G
Sbjct: 1726 PKG 1728
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/109 (38%), Positives = 49/109 (44%)
Query: 69 EERGPGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEKRGPGD 123
E R G+ + GP G K + GP G ERG G R GP GD RGP GDK RGP
Sbjct: 1711 ESRDKGEPGQEGPRGPKGDPGPPGVSGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPG 1770
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
+ R D + PG G K GD + G PG + E P G
Sbjct: 1771 LDGRSGLDGKPGAPGPPGLHGASGKA----GDPGRDGLPGLRGEHGPPG 1815
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/120 (39%), Positives = 61/120 (50%)
Query: 66 GDKEERGP-GDKEKRGP-GDKE---ERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDK 116
GD +RGP G + GP GD E+G PG GP G R + G G+K + G PG+
Sbjct: 1586 GDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPVGPRGRDGEAGEKGDEGIPGEP 1645
Query: 117 EKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
G G++ RG PG RGP G+K ++G PG E+ G GP GD+ E P G
Sbjct: 1646 GLPGKAGERGLRGAPGP---RGPVGEKGDQGDPG--EDGRNGSPGSSGPKGDRGEPGPPG 1700
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 47/117 (40%), Positives = 60/117 (51%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG-PGDKEKR 119
PG + G PG K G PGD E G G+K + G RE GP G K ERG PG+ +
Sbjct: 1823 PGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGDSGAPGRE--GPDGPKGERGAPGNPGLQ 1880
Query: 120 GP-GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-PGGL 172
GP G + GP + PG GP K +RG+ G K ++G PG++ R PG L
Sbjct: 1881 GPPGLPGQVGPPG--QGFPGVPGITGP--KGDRGETGSKGEQGLPGERGLRGEPGSL 1933
Score = 116 (45.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 47/124 (37%), Positives = 54/124 (43%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRG----PGDKEERGP-GD 115
PG G G + GP G++ ERGP G K E G PG G PG K + GP G
Sbjct: 1314 PGVPGSPGIKGSTGRPGPRGEQGERGPQGPKGEPGEPGQITGGGGPGFPGKKGDPGPSGP 1373
Query: 116 KEKRGP-GDKEKRGP----GDKEERGPGDKEERGPGDKE--ERGQGDKEKRG-PGDKEER 167
RGP GD RGP G + GD+ ERGP QGD G PG +
Sbjct: 1374 PGSRGPVGDPGPRGPPGLPGISVKGDKGDRGERGPPGPGIGASEQGDPGLPGLPGSPGPQ 1433
Query: 168 APGG 171
P G
Sbjct: 1434 GPAG 1437
Score = 112 (44.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 45/115 (39%), Positives = 55/115 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGP----GDKEKR 119
PG + E+G +K G G K ++G E PG R +G D ERGP GDK R
Sbjct: 2489 PGSRGEQG--EKGAAGAAGLKGDKGDSAVIEGPPGPRGAKG--DMGERGPRGIDGDKGPR 2544
Query: 120 GPGDKEKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPG 170
G E PGDK +G PGDK G G + G +G+ G PG E APG
Sbjct: 2545 G----ESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPKGEPGAAGIPG--EPGAPG 2593
Score = 112 (44.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 49/126 (38%), Positives = 61/126 (48%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGP-GDK---EERGPGDREKRGP----GDKEERG--- 112
G++ E+G GD+ + G PG GP G K EE GPG ++GP G K E G
Sbjct: 2055 GERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDG 2114
Query: 113 -PGDKEKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKE 165
PG K RG PG K G PG + G PG ERG G + + G QG + GP G
Sbjct: 2115 DPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGLQGPRGTPGPVGSHG 2174
Query: 166 ERAPGG 171
+ P G
Sbjct: 2175 DPGPPG 2180
Score = 112 (44.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-----GDKEERGPGDREKRG-PGDKEERG-PGDK 116
PG + G PG K GD+ ERGP G E+ PG G PG + G PG+K
Sbjct: 1383 PGPRGPPGLPGISVKGDKGDRGERGPPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPGEK 1442
Query: 117 EKRGPGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA-PG 170
++G D E GPG + GP G+ RG PG +G +G G PG K ER PG
Sbjct: 1443 GEKG--DCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPG 1499
Score = 111 (44.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGP 121
PG ERG G + GP GD RGP GDK +RGP + R D + PG G
Sbjct: 1733 PGVSGERGIDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGA 1792
Query: 122 ----GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEE 166
GD + G PG + E GP G G PG + G+ G K G PGD E
Sbjct: 1793 SGKAGDPGRDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGE 1846
Score = 110 (43.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 46/117 (39%), Positives = 53/117 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKR--G 120
GD+ G PG GP G K E GP PG PG K E+G PGD G
Sbjct: 2260 GDRGSPGVPGSPGLPGPVGPKGEPGPVG----APGQVVVGPPGAKGEKGAPGDLAGALLG 2315
Query: 121 -PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ----GDKEKRG-PGDKEERAPG 170
PG K RG PG + E+G + GPGD E GQ G K +G PG + PG
Sbjct: 2316 EPGAKGDRGLPGPRGEKGEAGRAG-GPGDPGEDGQKGAPGLKGLKGEPGIGVQGPPG 2371
Score = 108 (43.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 45/117 (38%), Positives = 58/117 (49%)
Query: 66 GDKEERGP----GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
G++ GP G+ K G PG G G E PG+R +RG +K ERG D+ + G
Sbjct: 2016 GERGPPGPPGLAGEPGKPGIPGLPGRAG-GSGEAGRPGERGERG--EKGERG--DQGRDG 2070
Query: 121 -PGDKEKRGP-GDK---EERGPGDKEERGP-GDKEERGQGDKEKRGPGDKEERA-PG 170
PG GP G K EE GPG E+GP G K +G+ + PG K +R PG
Sbjct: 2071 LPGLPGPPGPPGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDG-DPGPKGDRGVPG 2126
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 60/192 (31%), Positives = 75/192 (39%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
RGE S E+ PG++ RG PG P
Sbjct: 1909 RGETGSKGEQGLPGERGLRGEPGSL----PNAERLLETAGIKVSALREIVDTWDESSGSF 1964
Query: 64 XPGDKEERGP-GDKEKRGPGDKEER-G-PGDKEERGP-GDREKRGP-----GDKEERGP- 113
P + GP GD RGP KE G PG++ +G GD +GP G++ GP
Sbjct: 1965 LPVPERRPGPKGDPGDRGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPGPP 2024
Query: 114 ---GDKEKRG-PGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-------P 161
G+ K G PG + G G E PG++ ERG +K ERG QG G P
Sbjct: 2025 GLAGEPGKPGIPGLPGRAG-GSGEAGRPGERGERG--EKGERGDQGRDGLPGLPGPPGPP 2081
Query: 162 GDK---EERAPG 170
G K EE PG
Sbjct: 2082 GPKVAIEEPGPG 2093
Score = 105 (42.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 47/120 (39%), Positives = 55/120 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGP-GDKE---ERGP----G 114
GDK E G PG G GD E G PG + PG GP GD+ + GP G
Sbjct: 2632 GDKGEAGFPGRPGLAGKKGDMGEPGLPG--QSGAPGKEGLIGPKGDRGFDGQSGPKGDQG 2689
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPG 170
+K +RGP G GP G+ GP G G K G QG K +RGP G+ APG
Sbjct: 2690 EKGERGPPGVGGFPGPRGNDGSSGPPGPPG-GVGPKGPEGLQGQKGERGPPGESVVGAPG 2748
Score = 102 (41.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 47/128 (36%), Positives = 57/128 (44%)
Query: 65 PGDK---EERGPGDKEKRGP----GDKEERG----PGDKEERG-PGDREKRG-PGDKEER 111
PG K EE GPG ++GP G K E G PG K +RG PG + G PG +
Sbjct: 2081 PGPKVAIEEPGPGLAREQGPPGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHD 2140
Query: 112 G-PGDKEKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP----GD 163
G PG +RG E + PG + RG PG G PG G G +GP G+
Sbjct: 2141 GNPGLPGERGVAGPEGK-PGLQGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGE 2199
Query: 164 KEERAPGG 171
E P G
Sbjct: 2200 PGETGPPG 2207
Score = 101 (40.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 43/111 (38%), Positives = 50/111 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGPGDKEERGPGDKEKRG- 120
G K +RG G +G G+K ERGP G GP G+ GP G G K G
Sbjct: 2671 GPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFPGPRGNDGSSGPPGPPG-GVGPKGPEGL 2729
Query: 121 PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERA 168
G K +RGP G+ PG PG ERG QG GP G+K E A
Sbjct: 2730 QGQKGERGPPGESVVGAPG-----APGTPGERGEQGRPGPAGPRGEKGEAA 2775
Score = 57 (25.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARG 32
G++ E PGDK +G PGDK + G
Sbjct: 2539 GDKGPRGESGNPGDKGSKGEPGDKGSAG 2566
Score = 49 (22.3 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 13 EERGPGDKEERGP-GDKKARG 32
EE GPG E+GP G K A+G
Sbjct: 2088 EEPGPGLAREQGPPGLKGAKG 2108
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGE+ GPGD E G PG K +G
Sbjct: 2329 RGEKGEAGRAGGPGDPGEDGQKGAPGLKGLKG 2360
Score = 45 (20.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDK 28
++ +GE SD + PG K +RG PG K
Sbjct: 2103 LKGAKGEPGSDGD---PGPKGDRGVPGIK 2128
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 RASDKEERG-PGDKEERGPGDKKARG 32
R +K E G PGD GPG A+G
Sbjct: 1527 RRGEKGEPGRPGDPAV-GPGGAGAKG 1551
Score = 41 (19.5 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 8 RASDKEERGPGDKEERGPGDKKARGP 33
R +K E+G D E+ GPG GP
Sbjct: 1438 RPGEKGEKG--DCEDGGPGLPGQPGP 1461
Score = 41 (19.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 17 PGDK---EERGPGDKKARGP 33
PG K EE GPG + +GP
Sbjct: 2081 PGPKVAIEEPGPGLAREQGP 2100
Score = 41 (19.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
RG A DK +RGP + R D K P
Sbjct: 1757 RGP-AGDKGDRGPPGLDGRSGLDGKPGAP 1784
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDK--EERGP-GDKKARGP 33
RG S E+ PG + GP GD RGP
Sbjct: 1562 RGASGSKGEQGAPGLALPGDPGPKGDPGDRGP 1593
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERG-PGDKKARG 32
M +G+R PG K ERG PG +G
Sbjct: 1473 MTGPKGDRGLTGTPGEPGVKGERGHPGPVGPQG 1505
Score = 39 (18.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RGP 33
G+R D PG++ GP K +GP
Sbjct: 2135 GKRGHDGNPGLPGERGVAGPEGKPGLQGP 2163
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGE E+ PG + RG PG + +G
Sbjct: 2465 RGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQG 2496
Score = 35 (17.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 18 GDKEERGP 25
GD+ ERGP
Sbjct: 1401 GDRGERGP 1408
Score = 33 (16.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ D ++ PG K +G +GP
Sbjct: 2342 GDPGEDGQKGAPGLKGLKGEPGIGVQGP 2369
>UNIPROTKB|F1SN69 [details] [associations]
symbol:F1SN69 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104301 OMA:YSYPDRL
EMBL:CU618340 EMBL:CU606988 EMBL:CU861519
Ensembl:ENSSSCT00000006033 Uniprot:F1SN69
Length = 1869
Score = 130 (50.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 44/115 (38%), Positives = 59/115 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
G+K E+G K + PG +RGP GD+ +RG PGD G G + RG PG + + G
Sbjct: 1331 GEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGH 1390
Query: 121 PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
PG + + GP G K E GP K+ + G RG QG GP G + P G+
Sbjct: 1391 PGPRGRPGPKGSKGEEGPKGKQGKA-GAPGRRGTQGLPGLPGPRGVVGRQGPEGV 1444
Score = 129 (50.5 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 40/96 (41%), Positives = 51/96 (53%)
Query: 72 GP-GDKEKRGPGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG-PGDKEK 126
GP G+K ++G K E PG +RGP GDR RG PGD G G + RG PG + +
Sbjct: 1328 GPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQ 1387
Query: 127 RG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRG 160
G PG + GP G K E GP K+ + G +RG
Sbjct: 1388 PGHPGPRGRPGPKGSKGEEGPKGKQGKA-GAPGRRG 1422
Score = 46 (21.3 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGPGDKK-ARG 32
G RA EER G K E+G +K RG
Sbjct: 1091 GPRAMPGEERKEGQKGEKGHIKRKYGRG 1118
Score = 38 (18.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 769 GKRGKMGRPGFPGDFGERGP 788
>UNIPROTKB|F1NBA6 [details] [associations]
symbol:F1NBA6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00700000104250 EMBL:AADN02014041 EMBL:AADN02014042
EMBL:AADN02014043 EMBL:AADN02014044 EMBL:AADN02014045
EMBL:AADN02014046 EMBL:AADN02014047 EMBL:AADN02014048
EMBL:AADN02014049 EMBL:AADN02014050 IPI:IPI00812311
Ensembl:ENSGALT00000009331 OMA:FNRPNAG Uniprot:F1NBA6
Length = 2636
Score = 137 (53.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 66/193 (34%), Positives = 82/193 (42%)
Query: 1 MQACRGERASDKEERG----PGDKEERGP----GDKKARGPXXXXXXXXXXXXXXXXXXX 52
+ RGER D RG PG +RGP G++ RG
Sbjct: 2222 LPGARGERG-DPGPRGEDGRPGLAGDRGPMGLPGNRGERGDKGDVGAVGQEGDKGDTVVV 2280
Query: 53 XXXXXXXXXXXXPGDKEERGP-GDKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDK 108
PGD+ +G GDK G+K E+G PG+K RG PG+R G PG
Sbjct: 2281 EGPAGARGSKGEPGDRGLKGTEGDK-----GEKGEQGMPGEKGARGEPGERGSAGFPG-- 2333
Query: 109 EERGPG-DKEKRG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDKEERGQGDKEKRG 160
RGPG K + G PG+ + G PG G G+K + GP G K ERG K G
Sbjct: 2334 -ARGPGGQKGEVGVPGEPGEPGLPGRDGIAGARGEKGDIGPLGLRGPKGERGM--KGACG 2390
Query: 161 -PGDKEERAPGGL 172
GDK E+ GL
Sbjct: 2391 LDGDKGEKGEPGL 2403
Score = 130 (50.8 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 54/137 (39%), Positives = 68/137 (49%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG----PGDKEERG-PGDREKRG-PGDKEERGP 113
PG+K E G PG +RG G++ E+G PG+ G PGDR RG PG RGP
Sbjct: 1424 PGEKGEPGRVGAPGQPGQRGKEGERGEKGDEGTPGEAGVPGKPGDRGPRGLPG---YRGP 1480
Query: 114 -GDKEKRG-PGDKEKRG----PGDKEERG----PG------DKEERGPGDKEERGQ-GDK 156
G+K + G PG + + G PG K +RG PG D G G+K E+G GD
Sbjct: 1481 PGEKGELGDPGPEGRNGIPGAPGTKGDRGEPGPPGLPGRAVDVGLGGAGEKGEKGDAGDP 1540
Query: 157 EKRGP-GDKEERAPGGL 172
+ G G K E P GL
Sbjct: 1541 GEDGAKGAKGESGPPGL 1557
Score = 124 (48.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 50/123 (40%), Positives = 62/123 (50%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERG-------PGDREKRGP-GDKEERG-PG 114
G++ ERG G + GP GD E PG+K E G PG R K G G+K + G PG
Sbjct: 1401 GEQGERGITGLTGRSGPKGDAGE--PGEKGEPGRVGAPGQPGQRGKEGERGEKGDEGTPG 1458
Query: 115 DKEKRG-PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAP 169
+ G PGD+ RG PG RGP G+K E G PG + G G +G D+ E P
Sbjct: 1459 EAGVPGKPGDRGPRGLPG---YRGPPGEKGELGDPGPEGRNGIPGAPGTKG--DRGEPGP 1513
Query: 170 GGL 172
GL
Sbjct: 1514 PGL 1516
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 45/106 (42%), Positives = 51/106 (48%)
Query: 82 GDKEERGPGDKEERG-PGDREKRGP----GDKEERG-PGDKEKRGP-GDKEKRGP-GDKE 133
GD EE PG G PGDR RGP G K ERG PG+ + G GD+ GP G+K
Sbjct: 1272 GDGEEGFPGPPGRPGDPGDRGPRGPPGEQGRKGERGAPGELGETGQKGDRGAPGPEGEKG 1331
Query: 134 ERG----PGDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
E G PG G PG RG+ GD G PG +P GL
Sbjct: 1332 ETGAPGRPGPSGREGVPGPAGPRGEKGDVGAPGEPG----HSPSGL 1373
Score = 117 (46.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 45/119 (37%), Positives = 61/119 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP--GDKEERGP-GDKEKRG 120
G+ ERGP +E G ERGP GDK ++G PG + G G++ GP G + G
Sbjct: 1737 GEPGERGPPGREG-SLGFPGERGPKGDKGDQGAPGPQGPTGRAVGERGLEGPPGQPGEPG 1795
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGGLV 173
PG G G+ E G PG+K +RG GD+ E+G+ G GP G K + G L+
Sbjct: 1796 KPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLPGPPGPPGPKADAMEGSLM 1854
Score = 114 (45.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 44/112 (39%), Positives = 55/112 (49%)
Query: 70 ERGPGDKEKRG-PGDKEERGPGDKE-ERG-PGDREKRGP-GDKEERGPGDKEKRGPGDKE 125
ER G K RG PG ERGP +E G PG+R +G GD+ GP R G++
Sbjct: 1727 ERLRGQKGSRGEPG---ERGPPGREGSLGFPGERGPKGDKGDQGAPGPQGPTGRAVGERG 1783
Query: 126 KRGP-GDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGGL 172
GP G E G PG G G+ E G+ G+K RG GD+ E+ GL
Sbjct: 1784 LEGPPGQPGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGL 1835
Score = 111 (44.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/96 (41%), Positives = 48/96 (50%)
Query: 66 GDKEERGPGDKEKRG-PGDKEERGP----GDKEERG-PGDREKRGP-GDKEERGP-GDKE 117
GD EE PG + G PGD+ RGP G K ERG PG+ + G GD+ GP G+K
Sbjct: 1272 GDGEEGFPGPPGRPGDPGDRGPRGPPGEQGRKGERGAPGELGETGQKGDRGAPGPEGEKG 1331
Query: 118 KRG----PGDKEKRG-PGDKEERGP-GDKEERG-PG 146
+ G PG + G PG RG GD G PG
Sbjct: 1332 ETGAPGRPGPSGREGVPGPAGPRGEKGDVGAPGEPG 1367
Score = 103 (41.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 42/113 (37%), Positives = 54/113 (47%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERG-PGDKEERGPG-DREKRGPGDKEERG----P 113
PG+K E G PG + + G PG K +RG PG G D G G+K E+G P
Sbjct: 1481 PGEKGELGDPGPEGRNGIPGAPGTKGDRGEPGPPGLPGRAVDVGLGGAGEKGEKGDAGDP 1540
Query: 114 GDKEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPG 162
G+ +G G+ G PG + GP G RG PGD RG ++ RG G
Sbjct: 1541 GEDGAKGAKGESGPPGLPGVRGIEGPRGPPGARGDPGD---RGLSGEKVRGMG 1590
Score = 100 (40.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 45/112 (40%), Positives = 53/112 (47%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRG-PGDKEERG-PGDKEKRG 120
GDK E+G PG + G PG K E PG+ G PG K G G K +RG G + +G
Sbjct: 2393 GDKGEKGEPGLPGRSGLPGRKGE--PGELGLSGAPGVPGKEGLMGPKGDRGFDGQQGAKG 2450
Query: 121 P-GDKEKRG-PGDKEERGP-GDKEERGP----GDKEERG----QGDKEKRGP 161
G+K RG PG GP G GP G RG QG K +RGP
Sbjct: 2451 DQGEKGDRGAPGMIGTPGPRGSDGAPGPPGPPGSVGPRGPEGMQGQKGERGP 2502
Score = 99 (39.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 44/120 (36%), Positives = 53/120 (44%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKR 119
PG E G PG + G PG E G PG GP G +G PGD PG
Sbjct: 1996 PGQVGESGKPGVPGRDGVPGKDGEPGMPGKLGVPGPSGPTGPKGEPGDAG--APGQGIAG 2053
Query: 120 GPGDKEKRG-PGDKEE--RG-PGDKEERG-PGDKEERGQ--GDKEKRGPGDKEERAPGGL 172
PG K ++G P E G PG K RG PG K E+G+ G E PG+ + G+
Sbjct: 2054 PPGAKGEKGEPALLEGVLLGEPGSKGARGLPGPKGEKGEPGGAGEPGDPGEDGAKGSSGV 2113
Score = 49 (22.3 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 11 DKEERGPGDKEERG-PGDKKARGP 33
D EE PG G PGD+ RGP
Sbjct: 1273 DGEEGFPGPPGRPGDPGDRGPRGP 1296
Score = 49 (22.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 5 RGERASDKE--ERGPGDKE-------ERGP-GDKKARG 32
RG++ S E ERGP +E ERGP GDK +G
Sbjct: 1730 RGQKGSRGEPGERGPPGREGSLGFPGERGPKGDKGDQG 1767
Score = 46 (21.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 2 QACRGERASDKEERGPGDKEERG-PGDKKARG 32
Q +GER + E G K +RG PG + +G
Sbjct: 1300 QGRKGERGAPGELGETGQKGDRGAPGPEGEKG 1331
Score = 44 (20.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 6 GERASD--KEERG-PGDKEERGP-GDK 28
GER K +G PG + ERGP GDK
Sbjct: 1858 GERGPPGLKGVKGEPGAEGERGPKGDK 1884
Score = 42 (19.8 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 8 RASDKEERGPGDKEERG----PGDKKARG 32
RA D G G+K E+G PG+ A+G
Sbjct: 1519 RAVDVGLGGAGEKGEKGDAGDPGEDGAKG 1547
Score = 42 (19.8 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G+ + E PG +RGP G RGP
Sbjct: 1451 KGDEGTPGEAGVPGKPGDRGPRGLPGYRGP 1480
Score = 41 (19.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 17 PGDKEERGP-GDKKARG 32
PGD+ RGP G++ +G
Sbjct: 1288 PGDRGPRGPPGEQGRKG 1304
Score = 38 (18.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 15 RGP----GDKEERGPGDKKARG 32
RGP GD +RG +K RG
Sbjct: 1567 RGPPGARGDPGDRGLSGEKVRG 1588
Score = 36 (17.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 15 RGPGDKEERGPGDKKARG 32
RGP + PG K RG
Sbjct: 1129 RGPPGESVEQPGKKGDRG 1146
Score = 35 (17.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
+G+ E+ G K E GP G RG
Sbjct: 1534 KGDAGDPGEDGAKGAKGESGPPGLPGVRG 1562
>MGI|MGI:1277201 [details] [associations]
symbol:Col13a1 "collagen, type XIII, alpha 1" species:10090
"Mus musculus" [GO:0001503 "ossification" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008201 "heparin binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] MGI:MGI:1277201 GO:GO:0016021
GO:GO:0005886 GO:GO:0030154 GO:GO:0008201 GO:GO:0005911
GO:GO:0016337 GO:GO:0007160 HOGENOM:HOG000085653 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0001958 HOVERGEN:HBG004933
CTD:1305 eggNOG:NOG254293 KO:K16617 OrthoDB:EOG4894NC GO:GO:0001763
EMBL:U30292 EMBL:AF063693 EMBL:AF063666 EMBL:AF063667 EMBL:AF063668
EMBL:AF063669 EMBL:AF063670 EMBL:AF063671 EMBL:AF063672
EMBL:AF063673 EMBL:AF063674 EMBL:AF063675 EMBL:AF063676
EMBL:AF063677 EMBL:AF063678 EMBL:AF063679 EMBL:AF063680
EMBL:AF063681 EMBL:AF063682 EMBL:AF063683 EMBL:AF063684
EMBL:AF063685 EMBL:AF063686 EMBL:AF063687 EMBL:AF063688
EMBL:AF063689 EMBL:AF063690 EMBL:AF063691 EMBL:AF063692
IPI:IPI00620475 IPI:IPI00844674 RefSeq:NP_031757.1
UniGene:Mm.300931 STRING:Q9R1N9 PhosphoSite:Q9R1N9 PRIDE:Q9R1N9
Ensembl:ENSMUST00000105454 GeneID:12817 KEGG:mmu:12817
UCSC:uc007fgn.1 GeneTree:ENSGT00530000063274 InParanoid:Q9R1N9
OMA:YPHREYP NextBio:282282 Bgee:Q9R1N9 CleanEx:MM_COL13A1
Genevestigator:Q9R1N9 Uniprot:Q9R1N9
Length = 751
Score = 120 (47.3 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 49/122 (40%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERGP----GDREKRG-PGDKEERGP-GD 115
PG +G PG K + G G K E+G G+K +RGP G G PG GP G
Sbjct: 610 PGPPGLQGFPGPKGEAGLEGSKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 669
Query: 116 KEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERA 168
GP G++ +G PG G G G PGDK RG+ G K RGP GDK ++ A
Sbjct: 670 PGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 729
Query: 169 PG 170
PG
Sbjct: 730 PG 731
Score = 116 (45.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 47/117 (40%), Positives = 56/117 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGP----GDKEERGPGDKEK 118
PG+K E G G + GP G+K E PGD E PG GP G E+G EK
Sbjct: 539 PGEKGETGQAGPQGLDGPTGEKGE--PGD--EGRPGATGLPGPIGLPGFTGEKGEAG-EK 593
Query: 119 RGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDK-EKRGPGDKEERAPGGL 172
PG + PG E PG +G PG K E G +G K EK G+K +R P GL
Sbjct: 594 GDPGAEVPGPPGP--EGPPGPPGLQGFPGPKGEAGLEGSKGEKGSQGEKGDRGPLGL 648
Score = 98 (39.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/108 (39%), Positives = 49/108 (45%)
Query: 73 PGDKEKRGPGDKEERGPGDKEERG-PGDREKRGPGDKEERG-PGDKEKRGP-GDKEKRGP 129
PG + GP PG + E G PG GDK RG PGD GP G K GP
Sbjct: 470 PGLPGQTGPPGPPGT-PGQRGEIGLPGPPGH--DGDKGPRGKPGDMGPAGPQGPPGKDGP 526
Query: 130 -GDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP-GDK----EERAPG 170
G K E GP PG+K E GQ G + GP G+K +E PG
Sbjct: 527 PGMKGEVGPPGS----PGEKGETGQAGPQGLDGPTGEKGEPGDEGRPG 570
Score = 47 (21.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1 MQACRGERASDKEERGPGDKEERGPG 26
M A R +A+ RGPG+ GPG
Sbjct: 1 MVAERTRKAAASGSRGPGELGAPGPG 26
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE D + PG + ++G PG +GP
Sbjct: 403 KGEAGVDGQAGPPGQQGDKGQPGAAGEQGP 432
Score = 38 (18.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE+ E+ PG + PG + GP
Sbjct: 585 GEKGEAGEKGDPGAEVPGPPGPEGPPGP 612
Score = 37 (18.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 23 RGPGDKKARGP 33
RGPG+ A GP
Sbjct: 15 RGPGELGAPGP 25
>UNIPROTKB|Q5TM61 [details] [associations]
symbol:PPP1R10 "Serine/threonine-protein phosphatase 1
regulatory subunit 10" species:9544 "Macaca mulatta" [GO:0000785
"chromatin" evidence=ISS] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=ISS] InterPro:IPR000571 InterPro:IPR003617
InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 SMART:SM00509 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0000785
GO:GO:0006351 GO:GO:0003723 EMBL:AB128049 GO:GO:0004864
Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0072357 CTD:5514
eggNOG:NOG69306 HOVERGEN:HBG053646 RefSeq:NP_001108416.1
UniGene:Mmu.17467 ProteinModelPortal:Q5TM61 GeneID:711949
KEGG:mcc:711949 NextBio:19975847 Uniprot:Q5TM61
Length = 940
Score = 131 (51.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 32/100 (32%), Positives = 37/100 (37%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G R GPG G G + GPG G G
Sbjct: 741 GPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGSG--MGSGHRPHEGPGSSMGGGGGH 798
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ GPG G G + G G G G + PGG
Sbjct: 799 RPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 838
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/98 (31%), Positives = 37/98 (37%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG G G + GPG G + GPG G G + GPG G G +
Sbjct: 742 PGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGSG--MGSGHRPHEGPGSSMGGGGGHR 799
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPG 162
GPG G G + GPG G G + GPG
Sbjct: 800 PHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPG 837
Score = 127 (49.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 31/105 (29%), Positives = 37/105 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G + GPG G G R GPG G G + GPG
Sbjct: 751 GHRPHEGPGGGMGNSSGHRPHEGPGSG--MGSGHRPHEGPGSSMGGGGGHRPHEGPGGGI 808
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G + GPG G G + G G G + PG
Sbjct: 809 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPG 853
Score = 123 (48.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 32/106 (30%), Positives = 38/106 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 781 GHRPHEGPGSSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSM 840
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G + GPG G + G + RGP E R G
Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGP-PHEHRGHDG 885
Score = 118 (46.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/98 (28%), Positives = 35/98 (35%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
G G + GPG G G + GPG G G + GPG G G + GPG
Sbjct: 779 GSGHRPHEGPGSSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 838
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
G + GPG G + G + R P
Sbjct: 839 SMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGP 876
Score = 113 (44.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 30/95 (31%), Positives = 35/95 (36%)
Query: 78 KRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERG 136
+ G G RG PG G G R GPG G + GPG G G + G
Sbjct: 730 RSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGSG--MGSGHRPHEG 787
Query: 137 PGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
PG G G + G G G G + PGG
Sbjct: 788 PGSSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGG 822
Score = 105 (42.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 29/99 (29%), Positives = 35/99 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G + GPG
Sbjct: 797 GHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG 856
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
G + G + RGP E RG G G +
Sbjct: 857 PHGHRPHDVPGHRGHDHRGP-PHEHRGHDGPGHGGGGHR 894
Score = 100 (40.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 31/108 (28%), Positives = 39/108 (36%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
P + G G E P RG G + GP + + GPG G G + GPG
Sbjct: 702 PYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNG-RGGPGGGMVGGGGHRPHEGPGG 760
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G + GPG G G + G G G G + PGG
Sbjct: 761 GMGNSSGHRPHEGPGSG--MGSGHRPHEGPGSSMGGGGGHRPHEGPGG 806
Score = 38 (18.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 674 RG-GDPFWDGPGDPMRGGP 691
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + GPG G G + GP
Sbjct: 777 GMGSGHRPHEGPGSSMGGGGGHRPHEGP 804
Score = 35 (17.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 674 RGGDPFWDGPGDPMRGGP 691
>UNIPROTKB|E1BPV7 [details] [associations]
symbol:100851509 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005604 "basement membrane" evidence=IEA]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50279 SMART:SM00131
SMART:SM00327 GO:GO:0004867 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 GeneTree:ENSGT00530000063022 OMA:DPNFEIF
EMBL:DAAA02009848 EMBL:DAAA02009849 EMBL:DAAA02009850
EMBL:DAAA02009851 EMBL:DAAA02009852 EMBL:DAAA02009853
EMBL:DAAA02009854 IPI:IPI00689388 Ensembl:ENSBTAT00000033859
Uniprot:E1BPV7
Length = 1133
Score = 134 (52.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 52/129 (40%), Positives = 62/129 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PG K ERGP GD +K PG++ RG PG K E+G G+ K G GDK GP G K
Sbjct: 258 PGIKGERGPKGNPGDAQKGEPGERGPRGIPGYKGEKGERGECGKPGIKGDKGSPGPNGPK 317
Query: 117 EKRG--------PGDKEKRG-PGDKEERGP----GDKEERGPGDKEERGQGDKEKR-GP- 161
RG PGD +G G+K E GP G G G + +GQ +E R GP
Sbjct: 318 GPRGIQQGIAGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIGQQGVKGQRGQEGRTGPP 377
Query: 162 GDKEERAPG 170
G PG
Sbjct: 378 GPTGVGEPG 386
Score = 128 (50.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 45/112 (40%), Positives = 55/112 (49%)
Query: 70 ERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP-G 122
E+G PGD G PG K ERGP + PGD +K PG++ RG PG K ++G G
Sbjct: 242 EKGDPGDPGPPGTHGNPGIKGERGP----KGNPGDAQKGEPGERGPRGIPGYKGEKGERG 297
Query: 123 DKEKRG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
+ K G GDK GP G K RG GD +G G+K E P G
Sbjct: 298 ECGKPGIKGDKGSPGPNGPKGPRGIQQGIAGPPGDPGPKGFQGNKGEPGPPG 349
Score = 36 (17.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 258 PGIKGERGP 266
>UNIPROTKB|F1SF83 [details] [associations]
symbol:COL28A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00530000063022 OMA:DPNFEIF EMBL:AEMK01169162
EMBL:CU657935 EMBL:CU928485 Ensembl:ENSSSCT00000016715
Uniprot:F1SF83
Length = 1034
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/106 (43%), Positives = 54/106 (50%)
Query: 70 ERG-PGDKEKRG----PGDKEERGP----GDKEERGPGDREKRG-PGDKEERGP-GDKEK 118
E+G PGD G PG K ERGP GD ++ PG+R G PG K E+G G+ K
Sbjct: 244 EKGDPGDPGPPGTHGNPGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGK 303
Query: 119 RG-PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP 161
G GDK GP G K RG PGD RG QG+K + GP
Sbjct: 304 PGVKGDKGSPGPYGPKGPRGLQQGVTGPPGDPGPRGFQGNKGEPGP 349
Score = 133 (51.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 49/121 (40%), Positives = 58/121 (47%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PG K ERGP GD +K PG++ G PG K E+G G+ K G GDK GP G K
Sbjct: 260 PGIKGERGPKGNPGDAQKGEPGERGPGGIPGYKGEKGELGECGKPGVKGDKGSPGPYGPK 319
Query: 117 EKRGPGDKEKRGPGDKEERG-PGDKEERGP----GDKEERGQGDKEKRGPGDKEER--AP 169
RG PGD RG G+K E GP G G G + +G +E R AP
Sbjct: 320 GPRGLQQGVTGPPGDPGPRGFQGNKGEPGPPGPYGPPGAPGIGQQGIKGERGQEGRTGAP 379
Query: 170 G 170
G
Sbjct: 380 G 380
Score = 100 (40.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 41/113 (36%), Positives = 52/113 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG K E+G G+ K G GDK GP G K RG PGD RG G+K + G
Sbjct: 289 PGYKGEKGELGECGKPGVKGDKGSPGPYGPKGPRGLQQGVTGPPGDPGPRGFQGNKGEPG 348
Query: 121 P-GDKEKRG-PGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPG 170
P G G PG ++ G++ + G G G G+ + GP E APG
Sbjct: 349 PPGPYGPPGAPGIGQQGIKGERGQEGRTGAPGPIGVGEPGQTGPRGPEG-APG 400
Score = 41 (19.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 12 KEERGP-GDKEERGPGDKKARGP 33
K ERGP G+ + G+ RGP
Sbjct: 263 KGERGPKGNPGDAQKGEPGERGP 285
Score = 36 (17.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 260 PGIKGERGP 268
>UNIPROTKB|P02461 [details] [associations]
symbol:COL3A1 "Collagen alpha-1(III) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007160 "cell-matrix adhesion" evidence=IDA] [GO:0018149
"peptide cross-linking" evidence=IDA] [GO:0050777 "negative
regulation of immune response" evidence=IMP] [GO:0005178 "integrin
binding" evidence=NAS;IMP] [GO:0030168 "platelet activation"
evidence=NAS] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=IDA] [GO:0034097 "response to cytokine
stimulus" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IDA] [GO:0042060 "wound healing" evidence=IDA;NAS]
[GO:0043206 "extracellular fibril organization" evidence=IMP]
[GO:0030199 "collagen fibril organization" evidence=NAS;IMP]
[GO:0007507 "heart development" evidence=IMP] [GO:0032964 "collagen
biosynthetic process" evidence=IMP;TAS] [GO:0005615 "extracellular
space" evidence=IDA;NAS] [GO:0043588 "skin development"
evidence=IMP] [GO:0005201 "extracellular matrix structural
constituent" evidence=IMP] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0005586 "collagen type III"
evidence=NAS;IMP] [GO:0048407 "platelet-derived growth factor
binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0043588 GO:GO:0005615 GO:GO:0030168 GO:GO:0007507
GO:GO:0046872 GO:GO:0034097 GO:GO:0030199 GO:GO:0005788
GO:GO:0001501 EMBL:CH471058 GO:GO:0005178 GO:GO:0007179
GO:GO:0007229 GO:GO:0007160
Pathway_Interaction_DB:endothelinpathway InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0001568 GO:GO:0048565
GO:GO:0050777 GO:GO:0009314 GO:GO:0018149 GO:GO:0032964
GO:GO:0071230 GO:GO:0043206 GO:GO:0005201 HOVERGEN:HBG004933
KO:K06236 DrugBank:DB00048 DrugBank:DB00039 GO:GO:0048407
OrthoDB:EOG4FTW1C EMBL:X14420 EMBL:AY054301 EMBL:AY016295
EMBL:AC066694 EMBL:BC028178 EMBL:M26939 EMBL:X07240 EMBL:X15332
EMBL:S62925 EMBL:S79877 EMBL:M59312 EMBL:M59227 EMBL:M55603
EMBL:X06700 EMBL:X01655 EMBL:X01742 EMBL:M13146 EMBL:M11134
IPI:IPI00021033 IPI:IPI00167087 PIR:S05272 RefSeq:NP_000081.1
UniGene:Hs.443625 PDB:2V53 PDB:3DMW PDB:4AE2 PDB:4AEJ PDB:4AK3
PDBsum:2V53 PDBsum:3DMW PDBsum:4AE2 PDBsum:4AEJ PDBsum:4AK3
ProteinModelPortal:P02461 SMR:P02461 DIP:DIP-57177N IntAct:P02461
STRING:P02461 PhosphoSite:P02461 DMDM:124056490 PaxDb:P02461
PRIDE:P02461 Ensembl:ENST00000304636 GeneID:1281 KEGG:hsa:1281
UCSC:uc002uqj.1 CTD:1281 GeneCards:GC02P189803 HGNC:HGNC:2201
HPA:CAB016766 HPA:HPA007583 MIM:100070 MIM:120180 MIM:130020
MIM:130050 neXtProt:NX_P02461 Orphanet:2500 Orphanet:285
Orphanet:286 Orphanet:86 PharmGKB:PA26716 InParanoid:P02461
OMA:EGSPGHP PhylomeDB:P02461 ChiTaRS:COL3A1
EvolutionaryTrace:P02461 GenomeRNAi:1281 NextBio:5177
ArrayExpress:P02461 Bgee:P02461 Genevestigator:P02461
GermOnline:ENSG00000168542 GO:GO:0005586 Uniprot:P02461
Length = 1466
Score = 125 (49.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 46/119 (38%), Positives = 56/119 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG 120
PG++ G PG K +G PG G PG RGP G GP + PGDK + G
Sbjct: 728 PGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQ----PGDKGEGG 783
Query: 121 ----PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG RG PG++ E GP G G PG E G G E+ PG+K E P G+
Sbjct: 784 APGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPG-GKGERGAPGEKGEGGPPGV 841
Score = 120 (47.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/127 (39%), Positives = 55/127 (43%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG----PGDK 116
PG RG G+ + G PG RG PG GPG K GP G + E G PG
Sbjct: 512 PGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 117 EKRG-------PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGPG-DK 164
RG PG K G PG ERG PG +GP G E G QG GPG DK
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDK 629
Query: 165 EERAPGG 171
+ P G
Sbjct: 630 GDTGPPG 636
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/120 (39%), Positives = 53/120 (44%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 776 PGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGF-PGAPGQNGEPGGKGERGAPGEKG 834
Query: 118 KRGPGDKE--KRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ GP G G GP G K ERG PG G G + GP G P G
Sbjct: 835 EGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPG 894
Score = 109 (43.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 48/125 (38%), Positives = 55/125 (44%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP-GDKEE 110
PG + ERG PG K + G PG+ G PG ERG PG R GP G E
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGE 502
Query: 111 RGPGDKEKRGPGDKEKRGP-GDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP-GDKEE 166
+GP E+ PG RG G+ G PG RG PG G G K GP G + E
Sbjct: 503 KGPAG-ERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPG--GPGSDGKPGPPGSQGE 559
Query: 167 RA-PG 170
PG
Sbjct: 560 SGRPG 564
Score = 102 (41.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PG E PG RG PG++ G PG RG G + GP G
Sbjct: 281 PGLKGENGLPG--ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G +G G G PG K E
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEM 398
Query: 168 APGGL 172
P G+
Sbjct: 399 GPAGI 403
Score = 100 (40.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 41/105 (39%), Positives = 47/105 (44%)
Query: 73 PG-DKEKRGPGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRGPGDKEKRGP 129
PG D G GD+ E G PG G PG GP K GD+ + GP P
Sbjct: 1022 PGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKS----GDRGESGPAGPAG-AP 1076
Query: 130 GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPG 170
G RG PG + RG G+ ERG G K RG PG+ APG
Sbjct: 1077 GPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPG--APG 1119
Score = 50 (22.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG K ERG PG+K GP
Sbjct: 821 PGGKGERGAPGEKGEGGP 838
Score = 47 (21.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 225 GPAGKDGESGRPGRPGERGLPGPPGIKGP 253
Score = 44 (20.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 12 KEERG-PGDKEERGP 25
K ERG PG+K E GP
Sbjct: 824 KGERGAPGEKGEGGP 838
Score = 39 (18.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR-GP 33
G + E GPG +GP K GP
Sbjct: 588 GAPGKNGERGGPGGPGPQGPPGKNGETGP 616
Score = 39 (18.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE E PG RG PG++ G
Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPG 312
Score = 33 (16.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ E PG RG + R
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGR 526
>RGD|735115 [details] [associations]
symbol:Col27a1 "collagen, type XXVII, alpha 1" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0005583 "fibrillar collagen" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:735115
GO:GO:0046872 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 HSSP:Q15201 GO:GO:0005201 HOGENOM:HOG000085654
KO:K06236 GO:GO:0005583 SMART:SM00210 HOVERGEN:HBG098141
GeneTree:ENSGT00700000104301 CTD:85301 OrthoDB:EOG4FBHSB
OMA:YSYPDRL EMBL:AY232999 IPI:IPI00331946 RefSeq:NP_942042.1
UniGene:Rn.229726 ProteinModelPortal:Q80ZF0 STRING:Q80ZF0
PRIDE:Q80ZF0 Ensembl:ENSRNOT00000010333 GeneID:298101
KEGG:rno:298101 UCSC:RGD:735115 InParanoid:Q80ZF0 NextBio:643160
ArrayExpress:Q80ZF0 Genevestigator:Q80ZF0 Uniprot:Q80ZF0
Length = 1855
Score = 136 (52.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
G+K E+G K + PG ERGP GD+ +RG PGD G G + RG PG + + G
Sbjct: 1321 GEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGH 1380
Query: 121 PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
PG + + GP G K E GP K + G RG QG + GP G + P G+
Sbjct: 1381 PGPRGRPGPKGSKGEEGPKGKPGKA-GASGRRGTQGLQGLPGPRGVVGRQGPEGM 1434
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/110 (40%), Positives = 56/110 (50%)
Query: 72 GP-GDKEKRGPGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG-PGDKEK 126
GP G+K ++G K E PG ERGP GDR RG PGD G G + RG PG + +
Sbjct: 1318 GPKGEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQ 1377
Query: 127 RG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGGLV 173
G PG + GP G K E GP K + G +RG G + P G+V
Sbjct: 1378 PGHPGPRGRPGPKGSKGEEGPKGKPGKA-GASGRRGTQGLQGLPGPRGVV 1426
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 775 GKRGEMGRPGFPGDFGERGP 794
>UNIPROTKB|Q80ZF0 [details] [associations]
symbol:Col27a1 "Collagen alpha-1(XXVII) chain"
species:10116 "Rattus norvegicus" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
RGD:735115 GO:GO:0046872 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 HSSP:Q15201 GO:GO:0005201
HOGENOM:HOG000085654 KO:K06236 GO:GO:0005583 SMART:SM00210
HOVERGEN:HBG098141 GeneTree:ENSGT00700000104301 CTD:85301
OrthoDB:EOG4FBHSB OMA:YSYPDRL EMBL:AY232999 IPI:IPI00331946
RefSeq:NP_942042.1 UniGene:Rn.229726 ProteinModelPortal:Q80ZF0
STRING:Q80ZF0 PRIDE:Q80ZF0 Ensembl:ENSRNOT00000010333 GeneID:298101
KEGG:rno:298101 UCSC:RGD:735115 InParanoid:Q80ZF0 NextBio:643160
ArrayExpress:Q80ZF0 Genevestigator:Q80ZF0 Uniprot:Q80ZF0
Length = 1855
Score = 136 (52.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
G+K E+G K + PG ERGP GD+ +RG PGD G G + RG PG + + G
Sbjct: 1321 GEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGH 1380
Query: 121 PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
PG + + GP G K E GP K + G RG QG + GP G + P G+
Sbjct: 1381 PGPRGRPGPKGSKGEEGPKGKPGKA-GASGRRGTQGLQGLPGPRGVVGRQGPEGM 1434
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/110 (40%), Positives = 56/110 (50%)
Query: 72 GP-GDKEKRGPGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG-PGDKEK 126
GP G+K ++G K E PG ERGP GDR RG PGD G G + RG PG + +
Sbjct: 1318 GPKGEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQ 1377
Query: 127 RG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGGLV 173
G PG + GP G K E GP K + G +RG G + P G+V
Sbjct: 1378 PGHPGPRGRPGPKGSKGEEGPKGKPGKA-GASGRRGTQGLQGLPGPRGVV 1426
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 775 GKRGEMGRPGFPGDFGERGP 794
>ZFIN|ZDB-GENE-030131-9003 [details] [associations]
symbol:scaf4a "SR-related CTD-associated factor
4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030131-9003 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006903
InterPro:IPR006569 Pfam:PF04818 SMART:SM00582 PROSITE:PS51391
GeneTree:ENSGT00530000063946 EMBL:AL837524 EMBL:AL935277
IPI:IPI00993297 Ensembl:ENSDART00000108981 Uniprot:E7F172
Length = 1104
Score = 134 (52.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP--GDKEK-RGPGDK 124
+E PG E+ ++ R P + R G+RE+ G + ERG G++E+ R G++
Sbjct: 998 EEPEKPGGWERERREERWRRSPDGERGRDGGERERGRDGGERERGRDGGERERGRDGGER 1057
Query: 125 EKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEER 167
E+ G + ERG G + ERG G + ERG+ E+ D EER
Sbjct: 1058 ERGRDGGERERGRDGGERERGREGGERERGRDTGERERGRDGEER 1102
Score = 127 (49.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 38/114 (33%), Positives = 61/114 (53%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGP-GDREKRGPGDKEE-RGPGDKEK-RGP 121
P +E G +E PG E ++ R P G+R + G G++E R G++E+ R
Sbjct: 987 PDGRERFGGWHEEPEKPGGWERERREERWRRSPDGERGRDG-GERERGRDGGERERGRDG 1045
Query: 122 GDKEKRGPGDKEERG-PGDKEERG-PGDKEERGQ--GDKEK-RGPGDKEERAPG 170
G++E+ G + ERG G + ERG G + ERG+ G++E+ R G++E G
Sbjct: 1046 GERERGRDGGERERGRDGGERERGRDGGERERGREGGERERGRDTGERERGRDG 1099
Score = 121 (47.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + G G +R P +E G +E PG E+ ++ R P + R G++E
Sbjct: 973 GGRRPFGEGRGGER-PDGRERFGGWHEEPEKPGGWERERREERWRRSPDGERGRDGGERE 1031
Query: 126 KRGPGDKEERG-PGDKEERG-PGDKEERGQ--GDKEK-RGPGDKEERAPGG 171
+ G + ERG G + ERG G + ERG+ G++E+ R G++E GG
Sbjct: 1032 RGRDGGERERGRDGGERERGRDGGERERGRDGGERERGRDGGERERGREGG 1082
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G++ G G +E+ G + G G ER P RE+ G +E PG E+ ++
Sbjct: 958 GERPGLGRG-REQDWFGGRRPFGEGRGGER-PDGRERFGGWHEEPEKPGGWERERREERW 1015
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQ--GDKEK-RGPGDKEERAPGG 171
+R P + R G++E G + ERG+ G++E+ R G++E GG
Sbjct: 1016 RRSPDGERGRDGGERERGRDGGERERGRDGGERERGRDGGERERGRDGG 1064
Score = 35 (17.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 6 GERASDKEERGPGDKEERGPG 26
GER +E G +E PG
Sbjct: 984 GERPDGRERFGGWHEEPEKPG 1004
>UNIPROTKB|Q96QC0 [details] [associations]
symbol:PPP1R10 "Serine/threonine-protein phosphatase 1
regulatory subunit 10" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004864 "protein
phosphatase inhibitor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006606
"protein import into nucleus" evidence=TAS] InterPro:IPR000571
InterPro:IPR003617 InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711
PROSITE:PS50103 PROSITE:PS51319 SMART:SM00356 SMART:SM00509
GO:GO:0005634 EMBL:BA000025 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000785 GO:GO:0006351 GO:GO:0003723
EMBL:AL662800 EMBL:AL662825 GO:GO:0000790 GO:GO:0006606
GO:GO:0004864 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0072357
EMBL:Y13247 EMBL:AJ544537 EMBL:AB088097 EMBL:BX248507
IPI:IPI00298731 PIR:JE0291 RefSeq:NP_002705.2 UniGene:Hs.106019
ProteinModelPortal:Q96QC0 SMR:Q96QC0 DIP:DIP-39343N IntAct:Q96QC0
MINT:MINT-1197376 STRING:Q96QC0 PhosphoSite:Q96QC0 DMDM:61214507
PaxDb:Q96QC0 PeptideAtlas:Q96QC0 PRIDE:Q96QC0
Ensembl:ENST00000376511 Ensembl:ENST00000383586
Ensembl:ENST00000420949 Ensembl:ENST00000424446
Ensembl:ENST00000426299 Ensembl:ENST00000429597
Ensembl:ENST00000449113 GeneID:5514 KEGG:hsa:5514 UCSC:uc003nqn.1
CTD:5514 GeneCards:GC06M030568 H-InvDB:HIX0165052
H-InvDB:HIX0166290 H-InvDB:HIX0166579 H-InvDB:HIX0166833
H-InvDB:HIX0167082 H-InvDB:HIX0167322 H-InvDB:HIX0167569
HGNC:HGNC:9284 HPA:CAB025501 MIM:603771 neXtProt:NX_Q96QC0
PharmGKB:PA33612 eggNOG:NOG69306 HOGENOM:HOG000049285
HOVERGEN:HBG053646 InParanoid:Q96QC0 OMA:PPPHEHR OrthoDB:EOG451DQK
PhylomeDB:Q96QC0 ChiTaRS:PPP1R10 GenomeRNAi:5514 NextBio:21326
ArrayExpress:Q96QC0 Bgee:Q96QC0 CleanEx:HS_PPP1R10
Genevestigator:Q96QC0 GermOnline:ENSG00000204569 Uniprot:Q96QC0
Length = 940
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 32/100 (32%), Positives = 37/100 (37%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G R GPG G G + GPG G G
Sbjct: 740 GPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGG--MGSGHRPHEGPGGSMGGGGGH 797
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ GPG G G + G G G G + PGG
Sbjct: 798 RPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 837
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 32/106 (30%), Positives = 38/106 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 780 GHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSM 839
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G + GPG G + G + RGP E R G
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDG 885
Score = 125 (49.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 31/105 (29%), Positives = 37/105 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G + GPG G G R GPG G G + GPG
Sbjct: 750 GHRPHEGPGGGMGNSSGHRPHEGPGGG--MGSGHRPHEGPGGSMGGGGGHRPHEGPGGGI 807
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G + GPG G G + G G G + PG
Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPG 852
Score = 117 (46.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 28/98 (28%), Positives = 35/98 (35%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
G G + GPG G G + GPG G G + GPG G G + GPG
Sbjct: 778 GSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 837
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
G + GPG G + G + R P
Sbjct: 838 SMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGP 875
Score = 112 (44.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 29/99 (29%), Positives = 35/99 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G + GPG
Sbjct: 796 GHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG 855
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
G + G + RGP E RG G G +
Sbjct: 856 PHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 894
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 674 RG-GDPFWDGPGDPMRGGP 691
Score = 36 (17.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + GPG G G + GP
Sbjct: 776 GMGSGHRPHEGPGGSMGGGGGHRPHEGP 803
Score = 35 (17.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 674 RGGDPFWDGPGDPMRGGP 691
>UNIPROTKB|P12110 [details] [associations]
symbol:COL6A2 "Collagen alpha-2(VI) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=NAS;TAS] [GO:0030674 "protein
binding, bridging" evidence=NAS] [GO:0016337 "cell-cell adhesion"
evidence=NAS] [GO:0005576 "extracellular region" evidence=IDA;TAS]
[GO:0043234 "protein complex" evidence=IPI] [GO:0070208 "protein
heterotrimerization" evidence=IPI] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0030133 "transport vesicle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0043234 GO:GO:0009749 GO:GO:0005578
GO:GO:0030198 GO:GO:0030674 GO:GO:0042383 GO:GO:0005788
GO:GO:0016337 GO:GO:0005581 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0030133 GO:GO:0005201 eggNOG:NOG256042 KO:K06238
MIM:158810 MIM:254090 Orphanet:610 Orphanet:75840 CTD:1292
HOVERGEN:HBG051051 OMA:RALCNHD OrthoDB:EOG45TCMN EMBL:AY029208
EMBL:BC065509 EMBL:M81835 EMBL:X15977 EMBL:X06195 EMBL:S75462
EMBL:S75425 EMBL:S75428 EMBL:S75430 EMBL:S75432 EMBL:S75434
EMBL:S75436 EMBL:S75438 EMBL:S75440 EMBL:S75442 EMBL:S75444
EMBL:S75446 EMBL:S75448 EMBL:S75450 EMBL:S75452 EMBL:S75454
EMBL:S75456 EMBL:S75458 EMBL:S75460 EMBL:M34572 EMBL:M34571
EMBL:M34573 EMBL:M34570 EMBL:AL096746 IPI:IPI00073454
IPI:IPI00220613 IPI:IPI00304840 PIR:S05378 PIR:S09646 PIR:T12549
RefSeq:NP_001840.3 RefSeq:NP_478054.2 RefSeq:NP_478055.2
UniGene:Hs.420269 ProteinModelPortal:P12110 SMR:P12110
IntAct:P12110 STRING:P12110 PhosphoSite:P12110 DMDM:125987812
REPRODUCTION-2DPAGE:P12110 PaxDb:P12110 PRIDE:P12110 DNASU:1292
Ensembl:ENST00000300527 Ensembl:ENST00000310645
Ensembl:ENST00000357838 Ensembl:ENST00000397763
Ensembl:ENST00000409416 GeneID:1292 KEGG:hsa:1292 UCSC:uc002zhy.1
UCSC:uc002zhz.1 UCSC:uc002zia.1 GeneCards:GC21P047518
H-InvDB:HIX0016186 HGNC:HGNC:2212 HPA:HPA007029 MIM:120240
MIM:255600 neXtProt:NX_P12110 Orphanet:289380 PharmGKB:PA26728
InParanoid:P12110 PhylomeDB:P12110 ChiTaRS:COL6A2 GenomeRNAi:1292
NextBio:5231 PMAP-CutDB:P12110 ArrayExpress:P12110 Bgee:P12110
Genevestigator:P12110 GermOnline:ENSG00000142173 Uniprot:P12110
Length = 1019
Score = 125 (49.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 46/109 (42%), Positives = 54/109 (49%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERG---PGDREKRGPGDKEERGPGDKEKR 119
PG + RG PGD RG D + GP GD G PG R PG+K E GP E
Sbjct: 483 PGKQGSRGDPGDAGPRG--DSGQPGPKGDPGRPGFSYPGPRG--APGEKGEPGPRGPEG- 537
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GD 163
G GD +G PG K E+G P D G PG + RG G + + GP GD
Sbjct: 538 GRGDFGLKGEPGRKGEKGEPADPGPPGEPGPRGPRGVPGPEGEPGPPGD 586
Score = 125 (49.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 46/117 (39%), Positives = 60/117 (51%)
Query: 66 GDKEERG-PGDKEKRG-------PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP- 113
G K E+G PG + RG G K +RG PG + +G G+ K+G GD + GP
Sbjct: 439 GPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPR 498
Query: 114 GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEER 167
GD + GP GD + G RG PG+K E GP E G+GD +G PG K E+
Sbjct: 499 GDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEPGPRGPEG-GRGDFGLKGEPGRKGEK 554
Score = 122 (48.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRG 120
G K +RG PG + +G G+ ++G GD + GP GD + GP GD G RG
Sbjct: 463 GAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRG 522
Query: 121 -PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG+K + GP E G GD +G PG K E+G+ + PG+ R P G+
Sbjct: 523 APGEKGEPGPRGPEG-GRGDFGLKGEPGRKGEKGE-PADPGPPGEPGPRGPRGV 574
Score = 111 (44.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 42/108 (38%), Positives = 54/108 (50%)
Query: 73 PGDK-EKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGPGDKEKR 127
PG K K GPG RGP G+ RG PG + G G K E+G PG + RG E
Sbjct: 405 PGVKGAKGGPGP---RGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAG-EVG 460
Query: 128 GPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
G K +RG PG + +G G+ ++G +GD GP GD + P G
Sbjct: 461 NKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKG 508
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GER + PG RGP G+ A+G
Sbjct: 364 GERGDQGGKGDPGRPGRRGPPGEIGAKG 391
>ZFIN|ZDB-GENE-080721-25 [details] [associations]
symbol:zgc:194937 "zgc:194937" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] ZFIN:ZDB-GENE-080721-25
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00700000104194
EMBL:BX324177 IPI:IPI00860121 Ensembl:ENSDART00000113311
OMA:PTDTHIK Uniprot:F1QTQ2
Length = 687
Score = 112 (44.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 45/115 (39%), Positives = 55/115 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRG-P 121
GD GP G+ K G G++ E GP G + GPG+R RGP D PG + +G P
Sbjct: 351 GDPGVAGPIGNNGKTGERGEQGEVGPVGPRG--GPGERGARGP-DGPAGLPGARGSKGDP 407
Query: 122 GDKEKRGP----GDKEERGP----GDKEERGPGDKEERGQGDKEKRG----PGDK 164
G GP G K +RG G K E+GP EE GDK G PG+K
Sbjct: 408 GLPGLPGPAGFIGQKGDRGAVGFTGPKGEQGPSG-EEGAPGDKGDVGDEGEPGEK 461
Score = 107 (42.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 43/118 (36%), Positives = 55/118 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-------GDREKRG-PGDKEERGPGD 115
PG++ RGP D PG + +G PG GP GDR G G K E+GP
Sbjct: 383 PGERGARGP-DGPAGLPGARGSKGDPGLPGLPGPAGFIGQKGDRGAVGFTGPKGEQGPSG 441
Query: 116 KEKRGPGDKEKRGPGDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
+E PGDK GD + G PG+K G GD +G +G + + GP D PG
Sbjct: 442 EEG-APGDK-----GDVGDEGEPGEKGSTGKQGDPGNKGPEGARGQSGP-DGPVGVPG 492
Score = 51 (23.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE +D ++ PG+ + GP G + RGP
Sbjct: 120 GEAGADGDDGLPGEMGKVGPPGSRGVRGP 148
Score = 51 (23.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 6 GERASDKEERGP-GDKEERGPGDKKARGP 33
GER ++ E GP G + GPG++ ARGP
Sbjct: 366 GERG-EQGEVGPVGPRG--GPGERGARGP 391
>UNIPROTKB|F1NQ20 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9031
"Gallus gallus" [GO:0001894 "tissue homeostasis" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0005594 "collagen type IX" evidence=IEA] InterPro:IPR008985
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00210 OMA:GFCEPAS GO:GO:0005594
GeneTree:ENSGT00700000104194 EMBL:AADN02002545 EMBL:AADN02002546
EMBL:AADN02002547 EMBL:AADN02002548 EMBL:AADN02002549
IPI:IPI00820643 Ensembl:ENSGALT00000037052 ArrayExpress:F1NQ20
Uniprot:F1NQ20
Length = 933
Score = 122 (48.0 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 49/122 (40%), Positives = 57/122 (46%)
Query: 66 GDKEERG-PGDKEKRG----PGDKEERGP----GDKEERGP-GDREKRG-PGDKEERG-P 113
G+K RG GD +G PGD+ +RGP G K ERGP G R G PG K E G P
Sbjct: 492 GNKGARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLP 551
Query: 114 GDKEKRG-PGDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPG 170
G + G PG PG K E G PG + GP G +G PG K R P
Sbjct: 552 GVDGREGIPGM-----PGAKGEPGKPGTPGDTGPPGLPGL-PGSPGMKGIPGPKGNRGPP 605
Query: 171 GL 172
G+
Sbjct: 606 GV 607
Score = 118 (46.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 41/107 (38%), Positives = 54/107 (50%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGP-GDKEERG-PGDREKRG-PGDKEERGPGDK 116
PG K +RG PG K ++G PG + + G GD + G PG + G PGD RGP +
Sbjct: 671 PGGKGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGP--E 728
Query: 117 EKRG-PGDKEKRG-PGDK----EERGPGDKEERGPGDKEERGQGDKE 157
RG PG + RG PG + E+ PG +GP KE Q K+
Sbjct: 729 GSRGLPGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQ 775
Score = 117 (46.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 47/123 (38%), Positives = 56/123 (45%)
Query: 65 PGDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRG----PGDKEERG- 112
PGD+ +RGP G K +RGP G + G PG K E G PG + G PG K E G
Sbjct: 512 PGDQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGVDGREGIPGMPGAKGEPGK 571
Query: 113 PGDKEKRGPGDKEKRGPGDKEERG-PGDKEERGP-GDKEERGQGDKE-KRGP-GDKEERA 168
PG GP PG +G PG K RGP G G K ++GP G+
Sbjct: 572 PGTPGDTGPPGLPGL-PGSPGMKGIPGPKGNRGPPGVPGLMGNSGKPGEQGPEGEAGPTG 630
Query: 169 PGG 171
P G
Sbjct: 631 PRG 633
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 46/118 (38%), Positives = 61/118 (51%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGPGDKEERGP-GDKEKRG 120
G K +G G+ K+G G++ ++GP G+ +GP G RG GP G+K RG
Sbjct: 441 GQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGIT--GPKGNKGARG 498
Query: 121 -PGDKEKRG----PGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERA-PG 170
GD +G PGD+ +RGP +E GP K ERG QG + G PG K E PG
Sbjct: 499 LDGDPGPQGLPGAPGDQGQRGPVGEE--GP--KGERGPQGTRGINGLPGPKGESGLPG 552
Score = 48 (22.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 17 PGDKEERGP----GDKKARGP 33
PGD+ +RGP G K RGP
Sbjct: 512 PGDQGQRGPVGEEGPKGERGP 532
Score = 38 (18.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 17 PGDKEERGP-GDKKARGP 33
PGD +RGP G GP
Sbjct: 392 PGDPGKRGPPGPPGPPGP 409
Score = 33 (16.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 17 PGDKEERGP 25
PG K RGP
Sbjct: 596 PGPKGNRGP 604
>WB|WBGene00044201 [details] [associations]
symbol:H39E23.3 species:6239 "Caenorhabditis elegans"
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] eggNOG:NOG12793 GO:GO:0040027
GeneTree:ENSGT00680000100026 EMBL:Z96102 RefSeq:NP_001024021.1
ProteinModelPortal:Q564Q6 PaxDb:Q564Q6 EnsemblMetazoa:H39E23.3
GeneID:3565355 KEGG:cel:CELE_H39E23.3 UCSC:H39E23.3 CTD:3565355
WormBase:H39E23.3 HOGENOM:HOG000018731 InParanoid:Q564Q6
OMA:KPKTESA NextBio:956153 Uniprot:Q564Q6
Length = 746
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/183 (25%), Positives = 65/183 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R SDK + D E+ P ++A P P
Sbjct: 68 KRESDKPKTESADSEKNAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPA 127
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
+E P D EK+ P +E P D E+ P RE P D E++ P
Sbjct: 128 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKNAPAKREADKPKTESADSEKKAPA 187
Query: 115 ----DKEKRGPGDKEKRGPGDKEERGP----GDKEERGPGDKEERGQGDKEKRGPGDKEE 166
DK K D EK+ P +E P D E++ P +E DK K D E+
Sbjct: 188 KREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKRES----DKPKTESADSEK 243
Query: 167 RAP 169
+AP
Sbjct: 244 KAP 246
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/187 (24%), Positives = 67/187 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P ++A P P
Sbjct: 168 KREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPA 227
Query: 67 DKEERGP----GDKEKRGP----GDKEERGPGDKEERGPGDREKRGP----GDKEERGP- 113
+E P D EK+ P DK + D E++ P RE P D E++ P
Sbjct: 228 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPV 287
Query: 114 ---GDKEKRGPGDKEKRGPGDKEERGP----GDKEERGP----GDKEERGQGDKEKRGPG 162
DK K D EK+ P +E P D E++ P DK + D EK+ P
Sbjct: 288 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPT 347
Query: 163 DKEERAP 169
+E P
Sbjct: 348 KREADPP 354
Score = 139 (54.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 43/175 (24%), Positives = 63/175 (36%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P ++A P P
Sbjct: 108 KREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKRESDKPKTESADSEKNAPA 167
Query: 67 DKEERGP----GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
+E P D EK+ P +E DK + D EK+ P +E DK K
Sbjct: 168 KREADKPKTESADSEKKAPAKRE----ADKPKTESADSEKKAPAKRE----ADKPKTESA 219
Query: 123 DKEKRGPGDKEERGP----GDKEERGP----GDKEERGQGDKEKRGPGDKEERAP 169
D EK+ P +E P D E++ P DK + D EK+ P +E P
Sbjct: 220 DSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRESDKP 274
Score = 138 (53.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 47/183 (25%), Positives = 66/183 (36%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R SDK + D E+ P ++A P P
Sbjct: 148 KRESDKPKTESADSEKNAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPA 207
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
+E P D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 208 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPA 267
Query: 115 ----DKEKRGPGDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
DK K D EK+ P DK + D E++ P +E DK K D E+
Sbjct: 268 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRES----DKPKTESADSEK 323
Query: 167 RAP 169
+AP
Sbjct: 324 KAP 326
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 44/181 (24%), Positives = 67/181 (37%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P +++ P P
Sbjct: 128 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKNAPAKREADKPKTESADSEKKAPA 187
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGP- 113
+E P D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 188 KREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPV 247
Query: 114 ---GDKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEE--RGQGDKEKRGPGDKEERA 168
DK K D EK+ P +E P K E +K+ + + DK K D E++A
Sbjct: 248 KREADKPKTESADSEKKAPAKRESDKP--KTESADSEKKAPVKREADKPKTESADSEKKA 305
Query: 169 P 169
P
Sbjct: 306 P 306
Score = 131 (51.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/182 (24%), Positives = 65/182 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P ++A P P
Sbjct: 528 KREADKPKTESADSEKKAPAKREADPPKTESADSEKNAPAKREADKPKTESADSEKKAPA 587
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGP- 113
+E P D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 588 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPV 647
Query: 114 ---GDKEKRGPGDKEKRGPGDKEERGP----GDKEERGPGDKEERGQGDKEKRGPGDKEE 166
DK K D EK+ P +E P D E+ P +E DK K D E+
Sbjct: 648 KREADKPKTESADSEKKAPAKREADPPKTESADSEKNAPAKRE----ADKPKTESADSEK 703
Query: 167 RA 168
+A
Sbjct: 704 KA 705
Score = 129 (50.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/181 (24%), Positives = 67/181 (37%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP- 65
+R SDK + D E++ P ++A P P
Sbjct: 228 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPV 287
Query: 66 ---GDKEERGPGDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
DK + D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 288 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPT 347
Query: 115 DKEKRGP----GDKEKRGPGDKEERGPGDKEERGPGDKEE--RGQGDKEKRGPGDKEERA 168
+E P D EK+ P +E P K E +K+ + + DK K D E++A
Sbjct: 348 KREADPPKTESADSEKKAPAKREADKP--KTESADSEKKASAKREADKPKTESADSEKKA 405
Query: 169 P 169
P
Sbjct: 406 P 406
Score = 126 (49.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 46/179 (25%), Positives = 62/179 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
++A K E P K E +KKA P
Sbjct: 43 KKAPTKREADP-PKTESADSEKKA--PTKRESDKPKTESADSEKNAPAKREADKPKTESA 99
Query: 67 DKEERGPG----DKEKRGPGDKEERGPGDKEERGP----GDREKRGPGDKEERGP----G 114
D E++ P DK K D E++ P +E P D EK+ P +E P
Sbjct: 100 DSEKKAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKRESDKPKTESA 159
Query: 115 DKEKRGPG----DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
D EK P DK K D E++ P +E DK + D EK+ P +E P
Sbjct: 160 DSEKNAPAKREADKPKTESADSEKKAPAKRE----ADKPKTESADSEKKAPAKREADKP 214
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/173 (24%), Positives = 61/173 (35%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 64
R R ++ + D E++ P ++A P
Sbjct: 26 REARETEPVKLPTADSEKKAPTKREADPPKTESADSEKKAPTKRESDKPKTESADSEKNA 85
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
P +E P D EK+ P +E DK + D EK+ P +E DK K
Sbjct: 86 PAKREADKPKTESADSEKKAPAKRE----ADKPKTESADSEKKAPAKRE----ADKPKTE 137
Query: 121 PGDKEKRGPGDKEERGP----GDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
D EK+ P +E P D E+ P +E DK K D E++AP
Sbjct: 138 SADSEKKAPAKRESDKPKTESADSEKNAPAKRE----ADKPKTESADSEKKAP 186
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/181 (23%), Positives = 66/181 (36%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P +++ P P
Sbjct: 248 KREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPA 307
Query: 67 DKEERGP----GDKEKRGP----GDKEERGPGDKEERGPGDREKRGP----GDKEERGPG 114
+E P D EK+ P DK + D E++ P RE P D E++ P
Sbjct: 308 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPTKREADPPKTESADSEKKAPA 367
Query: 115 ----DKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEE--RGQGDKEKRGPGDKEERA 168
DK K D EK+ +E P K E +K+ + + DK K D E++A
Sbjct: 368 KREADKPKTESADSEKKASAKREADKP--KTESADSEKKAPVKREADKPKTESADSEKKA 425
Query: 169 P 169
P
Sbjct: 426 P 426
Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/175 (24%), Positives = 61/175 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +D + D E++ P ++A P P
Sbjct: 448 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPA 507
Query: 67 DKEERGP----GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP----GDKEK 118
+E P D EK+ P +E DK + D EK+ P +E P D EK
Sbjct: 508 KREADPPKTESADSEKKAPVKRE----ADKPKTESADSEKKAPAKREADPPKTESADSEK 563
Query: 119 RGPG----DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P DK K D E++ P +E P K E D EK+ P +E P
Sbjct: 564 NAPAKREADKPKTESADSEKKAPAKREADPP--KTE--SADSEKKAPAKREADPP 614
Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/183 (23%), Positives = 64/183 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP- 65
+R +D + D E++ P ++A P P
Sbjct: 468 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPV 527
Query: 66 ---GDKEERGPGDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
DK + D EK+ P +E P D E+ P RE P D E++ P
Sbjct: 528 KREADKPKTESADSEKKAPAKREADPPKTESADSEKNAPAKREADKPKTESADSEKKAPA 587
Query: 115 DKEKRGP----GDKEKRGPGDKEERGP----GDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+E P D EK+ P +E P D E++ P +E D K D E+
Sbjct: 588 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKRE----ADPPKTESADSEK 643
Query: 167 RAP 169
+AP
Sbjct: 644 KAP 646
Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 44/183 (24%), Positives = 65/183 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P ++A P P
Sbjct: 388 KREADKPKTESADSEKKAPVKREADKPKTESADSEKKAPVKREADPPKTESADSEKKAPT 447
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
+E P D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 448 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPA 507
Query: 115 DKEKRGP----GDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+E P D EK+ P DK + D E++ P +E D K D E+
Sbjct: 508 KREADPPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRE----ADPPKTESADSEK 563
Query: 167 RAP 169
AP
Sbjct: 564 NAP 566
Score = 120 (47.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 41/175 (23%), Positives = 61/175 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +D + D E++ P ++A P P
Sbjct: 428 KREADPPKTESADSEKKAPTKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPA 487
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGPGDKEERGPGDKEK 118
+E P D EK+ P +E P D E++ P RE DK + D EK
Sbjct: 488 KREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPVKRE----ADKPKTESADSEK 543
Query: 119 RGPGDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+ P +E P D E+ P +E DK + D EK+ P +E P
Sbjct: 544 KAPAKREADPPKTESADSEKNAPAKRE----ADKPKTESADSEKKAPAKREADPP 594
Score = 120 (47.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 45/187 (24%), Positives = 65/187 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP- 65
+R SDK + D E++ P ++A P P
Sbjct: 268 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRESDKPKTESADSEKKAPV 327
Query: 66 ---GDKEERGPGDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
DK + D EK+ P +E P D E++ P RE P D E++
Sbjct: 328 KREADKPKTESADSEKKAPTKREADPPKTESADSEKKAPAKREADKPKTESADSEKKASA 387
Query: 115 ----DKEKRGPGDKEKRGP----GDKEERGPGDKEERGP----GDKEERGQGDKEKRGPG 162
DK K D EK+ P DK + D E++ P D + D EK+ P
Sbjct: 388 KREADKPKTESADSEKKAPVKREADKPKTESADSEKKAPVKREADPPKTESADSEKKAPT 447
Query: 163 DKEERAP 169
+E P
Sbjct: 448 KREADPP 454
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/175 (24%), Positives = 62/175 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +D + D E++ P ++A P P
Sbjct: 348 KREADPPKTESADSEKKAPAKREADKPKTESADSEKKASAKREADKPKTESADSEKKAPV 407
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGP----GDREKRGPGDKEERGP----GDKEK 118
+E DK K D E++ P +E P D EK+ P +E P D EK
Sbjct: 408 KRE----ADKPKTESADSEKKAPVKREADPPKTESADSEKKAPTKREADPPKTESADSEK 463
Query: 119 RGPGDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+ P +E P D E++ P +E P K E D EK+ P +E P
Sbjct: 464 KAPAKREADPPKTESADSEKKAPAKREADPP--KTE--SADSEKKAPAKREADPP 514
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/183 (23%), Positives = 64/183 (34%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +D + D E++ P ++A P P
Sbjct: 508 KREADPPKTESADSEKKAPVKREADKPKTESADSEKKAPAKREADPPKTESADSEKNAPA 567
Query: 67 DKEERGP----GDKEKRGPGDKEERGP----GDKEERGPGDREKRGP----GDKEERGPG 114
+E P D EK+ P +E P D E++ P RE P D E++ P
Sbjct: 568 KREADKPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPA 627
Query: 115 DKEKRGP----GDKEKRGP----GDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+E P D EK+ P DK + D E++ P +E D K D E+
Sbjct: 628 KREADPPKTESADSEKKAPVKREADKPKTESADSEKKAPAKRE----ADPPKTESADSEK 683
Query: 167 RAP 169
AP
Sbjct: 684 NAP 686
Score = 116 (45.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 40/169 (23%), Positives = 60/169 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R +DK + D E++ P ++A P P
Sbjct: 568 KREADKPKTESADSEKKAPAKREADPPKTESADSEKKAPAKREADPPKTESADSEKKAPA 627
Query: 67 DKEERGP----GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
+E P D EK+ P +E DK + D EK+ P +E D K
Sbjct: 628 KREADPPKTESADSEKKAPVKRE----ADKPKTESADSEKKAPAKRE----ADPPKTESA 679
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEE--RGQGDKEKRGPGDKEERAP 169
D EK P +E P K E +K+ + + D K D E++AP
Sbjct: 680 DSEKNAPAKREADKP--KTESADSEKKASAKREADPPKTESADSEKKAP 726
Score = 116 (45.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 42/175 (24%), Positives = 62/175 (35%)
Query: 7 ERASDKEERGPGDKEERGPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPG 66
+R SDK + D E++ P ++A P P
Sbjct: 308 KRESDKPKTESADSEKKAPVKREADKPKTESADSEKKAPTKREADPPKTESADSEKKAPA 367
Query: 67 DKEERGP----GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
+E P D EK+ +E DK + D EK+ P +E DK K
Sbjct: 368 KREADKPKTESADSEKKASAKRE----ADKPKTESADSEKKAPVKRE----ADKPKTESA 419
Query: 123 DKEKRGPGDKEERGP----GDKEERGPGDKE----ERGQGDKEKRGPGDKEERAP 169
D EK+ P +E P D E++ P +E + D EK+ P +E P
Sbjct: 420 DSEKKAPVKREADPPKTESADSEKKAPTKREADPPKTESADSEKKAPAKREADPP 474
>UNIPROTKB|F1NDC7 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 GeneTree:ENSGT00640000091447
EMBL:AADN02016911 IPI:IPI00578006 Ensembl:ENSGALT00000037894
Uniprot:F1NDC7
Length = 476
Score = 120 (47.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/126 (37%), Positives = 60/126 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-------PGDREKRGP-GDKEERG-PGD 115
PG K E GP E+ PG PG K E+G PG GP G+K +RG PG
Sbjct: 254 PGQKGEAGPAG-ERGPPGPPGPSSPGQKGEKGDLGPRGFPGVTGSLGPKGEKGDRGVPGT 312
Query: 116 KEKRG-PGDKE---KRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP----GDK 164
+ ++G GD+ +GP G K +G G K +G PG K +G DK GP G K
Sbjct: 313 EGQKGIKGDQGLPGSQGPTGQKGSKGDYGSKGLKGEPGLKGAKG--DKGYPGPPGTKGSK 370
Query: 165 EERAPG 170
E+ G
Sbjct: 371 GEQGGG 376
Score = 117 (46.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 44/115 (38%), Positives = 55/115 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKRG 120
PG K ERGP + PG K ++G G + +G GDR GP G++ E+G G G
Sbjct: 152 PGHKGERGPPGLQGP-PGIKGDQGIQGLQGLQGSKGDRGPAGPRGEQGEQGMKGQAGIPG 210
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
P G K + G GD RGP G +G PG G + R PG K E P G
Sbjct: 211 PTGQKGEMGQKGDPGIRGPMGPPGHQGVPGQPGYNGNAGEPGR-PGQKGEAGPAG 264
Score = 101 (40.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 40/106 (37%), Positives = 48/106 (45%)
Query: 72 GP-GDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
GP G K + G GD RGP G +G PG G + R PG K + GP E+
Sbjct: 210 GPTGQKGEMGQKGDPGIRGPMGPPGHQGVPGQPGYNGNAGEPGR-PGQKGEAGPAG-ERG 267
Query: 128 GPGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERA-PG 170
PG PG K E+G D RG G GP G+K +R PG
Sbjct: 268 PPGPPGPSSPGQKGEKG--DLGPRGFPGVTGSLGPKGEKGDRGVPG 311
Score = 38 (18.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 152 PGHKGERGP 160
>UNIPROTKB|J9NUC9 [details] [associations]
symbol:HMGN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031492 "nucleosomal DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR000079 Pfam:PF01101
PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527 GO:GO:0005634
GO:GO:0000785 GO:GO:0031492 GeneTree:ENSGT00690000102194
EMBL:AAEX03026575 Ensembl:ENSCAFT00000044595 OMA:DEMEENT
Uniprot:J9NUC9
Length = 287
Score = 109 (43.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 68 KEERGPGDKEK----RGPGD-KEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
K+++G GD++K +G GD KEE E G G +++E+ GD EK G
Sbjct: 144 KDKKGKGDRKKDEDGKGKGDGKEEEKKEKNGEEGKGKGANSKEEEEKEKKKGD-EKEGED 202
Query: 123 DKEKRGPGDKEERGPGDKEERGPGD--KE-ERGQGDK----EKRGPGDKEE 166
K K G KE D E+ GD KE E G+ DK EKRG +KEE
Sbjct: 203 GKGK-GEDVKEFENEKDTGEKKQGDDRKENEDGRVDKDGKEEKRG--NKEE 250
Score = 105 (42.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 39/104 (37%), Positives = 53/104 (50%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDR-EKRGPGDKEERGPGDKEKRGPGDKE 125
+++E+ GD EK G D + +G KE D EK+ D++E G +K G +E
Sbjct: 188 EEKEKKKGD-EKEGE-DGKGKGEDVKEFENEKDTGEKKQGDDRKENEDGRVDK--DGKEE 243
Query: 126 KRGPGDKEERG--PGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
KRG +KEE G G KE+ G EE G GD K G KE +
Sbjct: 244 KRG--NKEEVGNKKGGKEKEEDG-AEENGNGDG-KDGRNGKENK 283
Score = 105 (42.0 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 67 DKEERGPGD---KEKRGPGDKEERGPG--DKEERGPGDREKRGPGDKEE----RGPGDKE 117
D++ +G GD +EK+ +E +G G KEE ++EK+ GD++E +G G+
Sbjct: 155 DEDGKGKGDGKEEEKKEKNGEEGKGKGANSKEEE---EKEKK-KGDEKEGEDGKGKGEDV 210
Query: 118 KRGPGDKE----KRGPGDKE-ERGPGDKE--ERGPGDKEERG--QGDKEKRGPGDKE 165
K +K+ K+G KE E G DK+ E G+KEE G +G KEK G +E
Sbjct: 211 KEFENEKDTGEKKQGDDRKENEDGRVDKDGKEEKRGNKEEVGNKKGGKEKEEDGAEE 267
Score = 101 (40.6 bits), Expect = 0.00033, P = 0.00033
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 68 KEERG-PGDKEKRGPGDKEERGPGDKEERGPGDREK----RGPGD-KEERGPGDKEKRGP 121
K++ G D++KR ++E+ DK +G GDR+K +G GD KEE KEK G
Sbjct: 121 KDQEGYVEDQKKRTENREDEKEYKDK--KGKGDRKKDEDGKGKGDGKEEE---KKEKNGE 175
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEE----RGQGDKEKRGPGDKE 165
K K G KEE +++E+ GD++E +G+G+ K +K+
Sbjct: 176 EGKGK-GANSKEE----EEKEKKKGDEKEGEDGKGKGEDVKEFENEKD 218
Score = 97 (39.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK- 124
GD++E G K K G KE D E+ GD K + ++ G +EKRG ++
Sbjct: 195 GDEKE-GEDGKGK-GEDVKEFENEKDTGEKKQGDDRKENEDGRVDKD-GKEEKRGNKEEV 251
Query: 125 -EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKR 159
K+G +KEE G EE G GD ++ G+ KE +
Sbjct: 252 GNKKGGKEKEEDGA---EENGNGDGKD-GRNGKENK 283
Score = 46 (21.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 5 RGERASDKEERGPGD-KEE 22
+G+R D++ +G GD KEE
Sbjct: 149 KGDRKKDEDGKGKGDGKEE 167
Score = 40 (19.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 5 RGERASDKEERGPGD--KEE--RGPGDKK 29
R + K+++G GD K+E +G GD K
Sbjct: 137 REDEKEYKDKKGKGDRKKDEDGKGKGDGK 165
Score = 36 (17.7 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 11 DKEERGPGDKEERGPGDKKARG 32
D+++R ++E+ DKK +G
Sbjct: 129 DQKKRTENREDEKEYKDKKGKG 150
>UNIPROTKB|F1NHH4 [details] [associations]
symbol:F1NHH4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005583 "fibrillar collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210
GO:GO:0005201 GO:GO:0005583 SMART:SM00210
GeneTree:ENSGT00700000104301 OMA:YSYPDRL EMBL:AADN02026658
EMBL:AADN02026659 EMBL:AADN02026660 IPI:IPI00594010
Ensembl:ENSGALT00000011272 Uniprot:F1NHH4
Length = 1836
Score = 124 (48.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 47/119 (39%), Positives = 59/119 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGPGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E+G PG K +G G E GP KE GP G++ +G G G PG +
Sbjct: 1221 PGKQGEKGRPGQKGSKGYQGQLGETGPPGKE--GPKGNQGPKGSRGTLGPMGAPGRMGAQ 1278
Query: 120 G-PGDKEKRG----PGDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERA-PG 170
G PG K +G PG GP G+K E+G K E QG RGP GD+ +R PG
Sbjct: 1279 GEPGLKGYQGHAGPPGPIGPPGPKGEKGEQGDDGKVEGPQGPPGDRGPVGDRGDRGEPG 1337
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 44/114 (38%), Positives = 56/114 (49%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERG-PGDKEERGP----GDREKRG-PGDKEERGP-GDKE 117
GD + G PG E+ G + E G GD GP GD+ ++G G+K E+G G K
Sbjct: 1144 GDPGQLGVPG--EQGLIGQRGEMGLEGDSGPPGPDGAKGDKGEQGLDGEKGEKGTEGLKG 1201
Query: 118 KRGP----GDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGPGDKE 165
K GP G RGP K PG + E+G PG K +G QG + GP KE
Sbjct: 1202 KEGPPGYPGITGVRGPEGK----PGKQGEKGRPGQKGSKGYQGQLGETGPPGKE 1251
Score = 47 (21.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 17 PGDKEERGP-GDKKARG 32
PGD+ ERGP G A+G
Sbjct: 696 PGDQGERGPAGSPGAKG 712
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 757 GKRGKMGRPGFPGDFGERGP 776
Score = 35 (17.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 25 PGDKKARGP 33
PGD+ RGP
Sbjct: 696 PGDQGERGP 704
>MGI|MGI:1924268 [details] [associations]
symbol:Col25a1 "collagen, type XXV, alpha 1" species:10090
"Mus musculus" [GO:0001540 "beta-amyloid binding" evidence=ISO]
[GO:0005576 "extracellular region" evidence=ISA] [GO:0005581
"collagen" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005887 "integral to plasma membrane"
evidence=ISA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:1924268 GO:GO:0005615 GO:GO:0005887 GO:GO:0008201
GO:GO:0001540 HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 EMBL:CH466532
GeneTree:ENSGT00530000063274 CTD:84570 HOVERGEN:HBG101380
EMBL:AF315290 EMBL:AC091312 EMBL:AC110540 EMBL:AC114642
EMBL:AC164078 IPI:IPI00117959 RefSeq:NP_084114.2 UniGene:Mm.91728
STRING:Q99MQ5 PhosphoSite:Q99MQ5 PRIDE:Q99MQ5
Ensembl:ENSMUST00000080335 GeneID:77018 KEGG:mmu:77018
UCSC:uc008riw.1 InParanoid:Q99MQ5 OMA:GPKGSKX NextBio:346304
CleanEx:MM_COL25A1 Genevestigator:Q99MQ5 Uniprot:Q99MQ5
Length = 666
Score = 119 (46.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 45/119 (37%), Positives = 57/119 (47%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERG-PGDREKRG----PGDKEERG-PGDKE 117
GD E GP GD ++G PG G+ E G PG + + G PG +G PG
Sbjct: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIG 347
Query: 118 KRG-PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+G PG G GD+ E GP + ERG PG +G QG+ RGP G K +R G
Sbjct: 348 PQGEPGLPGLPGTKGDRGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKG 406
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERGP----GDKKARG 32
RG+R E PG +GP GDK +G
Sbjct: 128 RGKRGRRGESGPPGQPGPQGPPGPKGDKGEQG 159
>UNIPROTKB|E7ENL6 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
EMBL:AC112715 EMBL:AC112721 HGNC:HGNC:2213 ChiTaRS:COL6A3
IPI:IPI00072918 ProteinModelPortal:E7ENL6 SMR:E7ENL6 PRIDE:E7ENL6
Ensembl:ENST00000347401 ArrayExpress:E7ENL6 Bgee:E7ENL6
Uniprot:E7ENL6
Length = 2976
Score = 130 (50.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 47/122 (38%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PG-DREKRGP----GDKEERG-PG 114
PG E+G PG + +GP G+K ERG G + + G PG D ++RGP GD G PG
Sbjct: 1923 PGSSGEKGNPGRRGDKGPRGEKGERGDVGIRGDPGNPGQDSQERGPKGETGDLGPMGVPG 1982
Query: 115 -DKEKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPGG 171
D GPG+ K G G PG K +G PG G QG + +GP P G
Sbjct: 1983 RDGVPGGPGETGKNG-GFGRRGPPGAKGNKGGPGQPGFEGEQGTRGAQGPAGPA--GPPG 2039
Query: 172 LV 173
L+
Sbjct: 2040 LI 2041
Score = 123 (48.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 49/125 (39%), Positives = 65/125 (52%)
Query: 66 GDKEERG-PGDKEKRGP-------GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP- 113
G K RG PG+K + G G+ ++G PG E+G PG R +GP G+K ERG
Sbjct: 1891 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 1950
Query: 114 GDKEKRG-PG-DKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEE 166
G + G PG D ++RGP G+ + GP G G PG E G+ G +RGP G K
Sbjct: 1951 GIRGDPGNPGQDSQERGPKGETGDLGPMGVPGRDGVPGGPGETGKNGGFGRRGPPGAKGN 2010
Query: 167 RA-PG 170
+ PG
Sbjct: 2011 KGGPG 2015
Score = 112 (44.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 42/105 (40%), Positives = 54/105 (51%)
Query: 74 GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP-GDKEKRGP- 129
G K RG PG+K E G + D +K PG E+G PG + +GP G+K +RG
Sbjct: 1891 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 1950
Query: 130 GDKEERG-PG-DKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
G + + G PG D +ERGP K E G D G PG + PGG
Sbjct: 1951 GIRGDPGNPGQDSQERGP--KGETG--DLGPMGVPG--RDGVPGG 1989
Score = 45 (20.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G+R K RG PG+K E G
Sbjct: 1884 QGCPGQRGV-KGSRGFPGEKGEVG 1906
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R +E GPG ERGP
Sbjct: 1858 GYRGYPGDEGGPG---ERGP 1874
>UNIPROTKB|E9PCV6 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
EMBL:AC112715 EMBL:AC112721 IPI:IPI00072917 HGNC:HGNC:2213
ChiTaRS:COL6A3 ProteinModelPortal:E9PCV6 SMR:E9PCV6 PRIDE:E9PCV6
Ensembl:ENST00000346358 ArrayExpress:E9PCV6 Bgee:E9PCV6
Uniprot:E9PCV6
Length = 2977
Score = 130 (50.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 47/122 (38%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PG-DREKRGP----GDKEERG-PG 114
PG E+G PG + +GP G+K ERG G + + G PG D ++RGP GD G PG
Sbjct: 1924 PGSSGEKGNPGRRGDKGPRGEKGERGDVGIRGDPGNPGQDSQERGPKGETGDLGPMGVPG 1983
Query: 115 -DKEKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPGG 171
D GPG+ K G G PG K +G PG G QG + +GP P G
Sbjct: 1984 RDGVPGGPGETGKNG-GFGRRGPPGAKGNKGGPGQPGFEGEQGTRGAQGPAGPA--GPPG 2040
Query: 172 LV 173
L+
Sbjct: 2041 LI 2042
Score = 123 (48.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 49/125 (39%), Positives = 65/125 (52%)
Query: 66 GDKEERG-PGDKEKRGP-------GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP- 113
G K RG PG+K + G G+ ++G PG E+G PG R +GP G+K ERG
Sbjct: 1892 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 1951
Query: 114 GDKEKRG-PG-DKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEE 166
G + G PG D ++RGP G+ + GP G G PG E G+ G +RGP G K
Sbjct: 1952 GIRGDPGNPGQDSQERGPKGETGDLGPMGVPGRDGVPGGPGETGKNGGFGRRGPPGAKGN 2011
Query: 167 RA-PG 170
+ PG
Sbjct: 2012 KGGPG 2016
Score = 112 (44.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 42/105 (40%), Positives = 54/105 (51%)
Query: 74 GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP-GDKEKRGP- 129
G K RG PG+K E G + D +K PG E+G PG + +GP G+K +RG
Sbjct: 1892 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 1951
Query: 130 GDKEERG-PG-DKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
G + + G PG D +ERGP K E G D G PG + PGG
Sbjct: 1952 GIRGDPGNPGQDSQERGP--KGETG--DLGPMGVPG--RDGVPGG 1990
Score = 45 (20.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G+R K RG PG+K E G
Sbjct: 1885 QGCPGQRGV-KGSRGFPGEKGEVG 1907
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R +E GPG ERGP
Sbjct: 1859 GYRGYPGDEGGPG---ERGP 1875
>UNIPROTKB|F1NWY2 [details] [associations]
symbol:F1NWY2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001763 "morphogenesis of a branching
structure" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] GO:GO:0008201 GO:GO:0005911 GO:GO:0016337
GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063274 OMA:YPHREYP EMBL:AADN02027997
IPI:IPI00587282 Ensembl:ENSGALT00000006816 Uniprot:F1NWY2
Length = 632
Score = 119 (46.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 44/110 (40%), Positives = 54/110 (49%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERG----PGDKEERGP-G----DREKRGPGDKEERG-P 113
GDK E G G GP G+K ERG PG GP G EK PG++ ++G P
Sbjct: 418 GDKGEPGQAGSPGLDGPTGEKGERGDQGMPGPPGLPGPIGLPGLTGEKGQPGERGDKGNP 477
Query: 114 GDKEKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGP 161
G+ PG + GP + PG K E G G K E+G QG+K RGP
Sbjct: 478 GESMSGPPGPQGPPGPPGLQGL-PGPKGEAGIDGMKGEKGVQGEKGDRGP 526
Score = 115 (45.5 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 49/122 (40%), Positives = 61/122 (50%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERGP-GD 115
PG +G PG K + G G K E+G G+K +RGP G G PG GP G
Sbjct: 491 PGPPGLQGLPGPKGEAGIDGMKGEKGVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 550
Query: 116 KEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERA 168
GP G++ +G PG GP G +G PGDK RG+ G K RG GDK ++ A
Sbjct: 551 SGPAGPKGERGSKGDPGVVGPMGPAGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGA 610
Query: 169 PG 170
PG
Sbjct: 611 PG 612
Score = 108 (43.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 47/121 (38%), Positives = 52/121 (42%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG 120
PG GP E PG GP G GP GD +G PG K ERG PG + G
Sbjct: 160 PGPPGPAGPAGPEGT-PGQPGPIGPPGLPGPPGPKGDPGIQGYPGRKGERGMPGLPGRHG 218
Query: 121 -PGDKEKRGPGDKEERG-PGDKEERG-------PGDKEERGQGDKEKRGPGDKEERAPGG 171
G G K E G PG+K E+G PG K E+G G E G K E P G
Sbjct: 219 MKGAPGTATAGMKGEPGTPGEKGEKGRAGDPGLPGPKGEKGNG--ENALVGGKGEPGPPG 276
Query: 172 L 172
L
Sbjct: 277 L 277
Score = 106 (42.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 47/121 (38%), Positives = 57/121 (47%)
Query: 65 PGDKEERG----PGDKEKRG-PGD-----KEERG-PGDKEERG-PGDREKRGPGDKEERG 112
PG K ERG PG +G PG K E G PG+K E+G GD PG K E+G
Sbjct: 202 PGRKGERGMPGLPGRHGMKGAPGTATAGMKGEPGTPGEKGEKGRAGDPGL--PGPKGEKG 259
Query: 113 PGDKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPG 170
G+ G G E PG PG K E G D G +G+K +RG PG++ P
Sbjct: 260 NGENALVG-GKGEPGPPGLPGP--PGPKGEAG--DVGAAGSRGEKGERGAPGEQGPMGPR 314
Query: 171 G 171
G
Sbjct: 315 G 315
Score = 41 (19.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 6 GERASDKEERG-PGDKEERGP-GDKKARG 32
G R +K ERG PG++ GP G K G
Sbjct: 294 GSRG-EKGERGAPGEQGPMGPRGPKGEPG 321
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+GE+ + PG K E+G G+ G
Sbjct: 240 KGEKGRAGDPGLPGPKGEKGNGENALVG 267
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 14 ERG-PGDKEERG-PGDKKARGP 33
E+G PG++ ++G PG+ + GP
Sbjct: 464 EKGQPGERGDKGNPGESMS-GP 484
Score = 35 (17.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GER DK PG+ PG + GP
Sbjct: 469 GERG-DKGN--PGESMSGPPGPQGPPGP 493
>UNIPROTKB|F1SUE9 [details] [associations]
symbol:COL13A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0001958 "endochondral ossification" evidence=IEA] [GO:0001763
"morphogenesis of a branching structure" evidence=IEA]
GO:GO:0008201 GO:GO:0005911 GO:GO:0016337 GO:GO:0007160
InterPro:IPR008160 Pfam:PF01391 GO:GO:0001958 GO:GO:0001763
GeneTree:ENSGT00530000063274 OMA:YPHREYP EMBL:CT990472
Ensembl:ENSSSCT00000011226 Uniprot:F1SUE9
Length = 635
Score = 118 (46.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 49/122 (40%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP----GDREKRG-PGDKEERGP-GD 115
PG +G PG K + G G K E+G G+K +RGP G G PG GP G
Sbjct: 494 PGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGV 553
Query: 116 KEKRGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERA 168
GP G++ +G PG G G G PGDK RG+ G K RGP GDK ++ A
Sbjct: 554 PGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGA 613
Query: 169 PG 170
PG
Sbjct: 614 PG 615
Score = 109 (43.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 47/119 (39%), Positives = 58/119 (48%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRG-PGDKEERG-PGDK 116
PG+K E+G PG GP G+K E PG + G G G PG E+G PG
Sbjct: 420 PGEKGEKGETGQPGPPGLDGPTGEKGE--PGGQGRPGVTGLPGPIGLPGFTGEKGEPG-- 475
Query: 117 EKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGGL 172
EK PG + PG E PG +G PG K E G G K ++G G+K +R P GL
Sbjct: 476 EKGDPGVEVPGPPGP--EGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGL 532
Score = 42 (19.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 6 GERASDKEERGPGDKEERG----PGDKKARGP 33
G + D PG+K E+G PG GP
Sbjct: 409 GMKGEDGHTGSPGEKGEKGETGQPGPPGLDGP 440
Score = 38 (18.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE+ E+ PG + PG + GP
Sbjct: 469 GEKGEPGEKGDPGVEVPGPPGPEGPPGP 496
>UNIPROTKB|P12111 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0005589 "collagen type VI"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030133 "transport vesicle"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR002035 InterPro:IPR002223 InterPro:IPR003961
Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234
PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060 SMART:SM00131
SMART:SM00327 Reactome:REACT_118779 Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004867 GO:GO:0009749 SUPFAM:SSF49265
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 GO:GO:0005788
GO:GO:0007517 InterPro:IPR008160 Pfam:PF01391 GO:GO:0030133
KO:K06238 MIM:158810 MIM:254090 Orphanet:610 Orphanet:75840
GO:GO:0005589 CTD:1293 eggNOG:NOG237718 HOVERGEN:HBG051052
OrthoDB:EOG4HT8R9 EMBL:X52022 EMBL:AK092021 EMBL:AC112715
EMBL:AC112721 EMBL:BC144595 EMBL:BC150625 EMBL:S49432 EMBL:M20778
EMBL:X06196 EMBL:M27449 IPI:IPI00022200 IPI:IPI00072917
IPI:IPI00220701 IPI:IPI00853061 IPI:IPI00946286 PIR:A59140
RefSeq:NP_004360.2 RefSeq:NP_476505.3 RefSeq:NP_476508.2
UniGene:Hs.233240 PDB:1KNT PDB:1KTH PDB:1KUN PDB:2KNT PDBsum:1KNT
PDBsum:1KTH PDBsum:1KUN PDBsum:2KNT ProteinModelPortal:P12111
SMR:P12111 IntAct:P12111 MINT:MINT-4053347 STRING:P12111
MEROPS:I02.968 PhosphoSite:P12111 DMDM:311033499 PaxDb:P12111
PRIDE:P12111 Ensembl:ENST00000295550 Ensembl:ENST00000353578
Ensembl:ENST00000392003 Ensembl:ENST00000409809
Ensembl:ENST00000472056 GeneID:1293 KEGG:hsa:1293 UCSC:uc002vwl.2
UCSC:uc002vwo.2 GeneCards:GC02M238248 H-InvDB:HIX0002952
HGNC:HGNC:2213 HPA:HPA010080 MIM:120250 neXtProt:NX_P12111
PharmGKB:PA26729 HOGENOM:HOG000015249 InParanoid:P12111 OMA:GRHANTK
PhylomeDB:P12111 ChiTaRS:COL6A3 EvolutionaryTrace:P12111
GenomeRNAi:1293 NextBio:5239 ArrayExpress:P12111 Bgee:P12111
CleanEx:HS_COL6A3 Genevestigator:P12111 GermOnline:ENSG00000163359
Uniprot:P12111
Length = 3177
Score = 130 (50.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 47/122 (38%), Positives = 60/122 (49%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PG-DREKRGP----GDKEERG-PG 114
PG E+G PG + +GP G+K ERG G + + G PG D ++RGP GD G PG
Sbjct: 2124 PGSSGEKGNPGRRGDKGPRGEKGERGDVGIRGDPGNPGQDSQERGPKGETGDLGPMGVPG 2183
Query: 115 -DKEKRGPGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPGG 171
D GPG+ K G G PG K +G PG G QG + +GP P G
Sbjct: 2184 RDGVPGGPGETGKNG-GFGRRGPPGAKGNKGGPGQPGFEGEQGTRGAQGPAGPA--GPPG 2240
Query: 172 LV 173
L+
Sbjct: 2241 LI 2242
Score = 123 (48.4 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 49/125 (39%), Positives = 65/125 (52%)
Query: 66 GDKEERG-PGDKEKRGP-------GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP- 113
G K RG PG+K + G G+ ++G PG E+G PG R +GP G+K ERG
Sbjct: 2092 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 2151
Query: 114 GDKEKRG-PG-DKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEE 166
G + G PG D ++RGP G+ + GP G G PG E G+ G +RGP G K
Sbjct: 2152 GIRGDPGNPGQDSQERGPKGETGDLGPMGVPGRDGVPGGPGETGKNGGFGRRGPPGAKGN 2211
Query: 167 RA-PG 170
+ PG
Sbjct: 2212 KGGPG 2216
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 42/105 (40%), Positives = 54/105 (51%)
Query: 74 GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP-GDKEKRGP- 129
G K RG PG+K E G + D +K PG E+G PG + +GP G+K +RG
Sbjct: 2092 GVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDV 2151
Query: 130 GDKEERG-PG-DKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
G + + G PG D +ERGP K E G D G PG + PGG
Sbjct: 2152 GIRGDPGNPGQDSQERGP--KGETG--DLGPMGVPG--RDGVPGG 2190
Score = 45 (20.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G+R K RG PG+K E G
Sbjct: 2085 QGCPGQRGV-KGSRGFPGEKGEVG 2107
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R +E GPG ERGP
Sbjct: 2059 GYRGYPGDEGGPG---ERGP 2075
>ZFIN|ZDB-GENE-041105-6 [details] [associations]
symbol:col5a1 "procollagen, type V, alpha 1"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-041105-6
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104155 EMBL:CU459135
EMBL:FP102894 EMBL:FP102966 EMBL:FP236595 IPI:IPI00963036
Ensembl:ENSDART00000027425 ArrayExpress:F1QPN2 Bgee:F1QPN2
Uniprot:F1QPN2
Length = 2024
Score = 119 (46.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 44/122 (36%), Positives = 61/122 (50%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK-E 117
PG++ GP G +G G GP G ERGP G G PG +GP G E
Sbjct: 1243 PGERGLPGPVGSAGLKGNEGPPGPPGPAGSPGERGPAGPAGPTGIPGRPGPQGPPGPAGE 1302
Query: 118 KRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAP 169
K GPG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+ P
Sbjct: 1303 KGGPGEKGPQGPAGRDGIQGPVGLPGPAGPIGPPGEDGDKGEIGEPGQKGSKGDKGEQGP 1362
Query: 170 GG 171
G
Sbjct: 1363 PG 1364
Score = 116 (45.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 44/119 (36%), Positives = 59/119 (49%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEE-RGP----GDREKRGP----GDKEERG-PG 114
PG + GP EK GPG+K +GP ++ +GP G GP GDK E G PG
Sbjct: 1291 PGPQGPPGPAG-EKGGPGEKGPQGPAGRDGIQGPVGLPGPAGPIGPPGEDGDKGEIGEPG 1349
Query: 115 DKEKRGPGDKEKRGP-GDKEERGP-GDKEERG----PGDKEERG----QGDKEKRG-PG 162
K +G DK ++GP G +GP G G PG + ++G +GD+ RG PG
Sbjct: 1350 QKGSKG--DKGEQGPPGPTGPQGPAGQPGPSGADGEPGPRGQQGLFGQKGDEGSRGFPG 1406
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 45/123 (36%), Positives = 58/123 (47%)
Query: 65 PGDKEERGP-GDKEKRG----PGDKEERGP-GDKEERG----PGDREKRGPGDKEERGPG 114
PGD GP G+K K G PG +GP G + +G G++ RG K PG
Sbjct: 1036 PGDPGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGK----PG 1091
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERA 168
+ +RGP G + +RGP G + GP G+ GP G ERG G + G PG K
Sbjct: 1092 PRGQRGPTGPRGERGPRGPTGKAGPKGNSGSDGPPGPPGERGLLGPQGPAGFPGPKGPPG 1151
Query: 169 PGG 171
P G
Sbjct: 1152 PPG 1154
Score = 110 (43.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/120 (37%), Positives = 52/120 (43%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP + PGDK + G PG GP
Sbjct: 1507 PGPKGP--PGDDGPKGSPGPSGFPGDPGPPGEPGPSGLDG-SPGDKGDDGEPGQPGSPGP 1563
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGP----GDKEERAPGGL 172
G+ GP G + GP E R G G K E G +G K GP G + P GL
Sbjct: 1564 TGETGPPGPPGKRGPHGPAGPEGRQGEKGAKGESGLEGPPGKTGPVGPQGSPGKPGPEGL 1623
Score = 96 (38.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 43/117 (36%), Positives = 53/117 (45%)
Query: 65 PGDKEERGP----GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERGP-GDK 116
PG +GP G+ G GD E G PG + + GP G R +RG +K E GP G
Sbjct: 1447 PGADGPQGPPGGIGNPGAVGEKGDAGEAGEPGPQGDIGPPGPRGERG--EKGEAGPAGSG 1504
Query: 117 EKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDK-EERAPG 170
GP K PGD +G PG G PG E G + PGDK ++ PG
Sbjct: 1505 GPPGP----KGPPGDDGPKGSPGPSGFPGDPGPPGEPGPSGLDG-SPGDKGDDGEPG 1556
Score = 52 (23.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 2 QACRGERASDKEERGPGDKEERGP-GDKKARGP 33
Q GE+ + PG + +RGP G + RGP
Sbjct: 1075 QGTSGEKGTRGTAGKPGPRGQRGPTGPRGERGP 1107
Score = 47 (21.6 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1342 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1371
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 13 EERGPGDKEERGPGDKKA-RGP 33
E+ GPG+K +GP + +GP
Sbjct: 1302 EKGGPGEKGPQGPAGRDGIQGP 1323
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G+R D PG+K RG G + GP
Sbjct: 811 KGDRGFDGLAGLPGEKGHRGETGPQGPPGP 840
>ZFIN|ZDB-GENE-070705-84 [details] [associations]
symbol:col28a1 "collagen, type XXVIII, alpha 1"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
SMART:SM00131 SMART:SM00327 ZFIN:ZDB-GENE-070705-84 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
HOGENOM:HOG000085654 GeneTree:ENSGT00530000063022 CTD:340267
EMBL:CR318650 EMBL:AM947022 IPI:IPI00854192 RefSeq:XP_002665574.1
UniGene:Dr.86465 Ensembl:ENSDART00000112808 GeneID:555428
KEGG:dre:555428 NextBio:20880971 Uniprot:C0H5W1
Length = 1170
Score = 133 (51.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/113 (42%), Positives = 54/113 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRGP 121
PG K RG PG + PG + RG PG K E+G G E G K ++GP G RGP
Sbjct: 268 PGPKGSRGQPGLNGR--PGLEGIRGRPGLKGEKG-GKGECGASGIKGDQGPDGSPGPRGP 324
Query: 122 -GDKEKRG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
GDK G PGD GP G K ERGP GD PG K E+ G
Sbjct: 325 RGDKGLTGNPGDTGPEGPVGSKGERGPSGPTGP-PGDPGVGFPGAKGEKGSQG 376
Score = 132 (51.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/113 (42%), Positives = 55/113 (48%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERGP-GDREKRGP-GDKEERG-PGDKEKRG 120
PG + RG PG K ++G G E G K ++GP G RGP GDK G PGD G
Sbjct: 283 PGLEGIRGRPGLKGEKG-GKGECGASGIKGDQGPDGSPGPRGPRGDKGLTGNPGDTGPEG 341
Query: 121 P-GDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPG 170
P G K +RGP PGD PG K E+G QG GP G E PG
Sbjct: 342 PVGSKGERGPSGPTGP-PGDPGVGFPGAKGEKGSQGRPGPTGPVGIGEPGMPG 393
Score = 113 (44.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 46/120 (38%), Positives = 55/120 (45%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERGP-GDKE---ERGP-GDREKRGPGDKEERGP-GDKEK 118
G+K + GP G RGP GP GD+ E GP G+R PG K E GP G
Sbjct: 459 GEKGDLGPIGPPGPRGPPGVGLVGPKGDQGFPGESGPQGERGIGEPGPKGEPGPVGAPGI 518
Query: 119 RG-PGDKEKRGP----GDKEERGPGDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
G PG+ GP G ERG +G PG+K +RG D+ RGP G P G
Sbjct: 519 PGIPGEDGSVGPKGEMGLSGERGQEGSPGKGIPGEKGDRG--DRGSRGPPGSSGAAGPPG 576
Score = 103 (41.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/113 (37%), Positives = 50/113 (44%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERGPGDKEKRGP 121
G K E G G++ + G PG +G PG+K +RG DR RGP G GP K P
Sbjct: 529 GPKGEMGLSGERGQEGSPG----KGIPGEKGDRG--DRGSRGPPGSSGAAGPPGA-KGEP 581
Query: 122 GDKEKRG-PGDKEERGPGDKEERGP-GDKEERGQGDKEKRGP-GDKEERAPGG 171
G G PG PG K E GP G G+ GP GD+ P G
Sbjct: 582 GSLGMMGLPGPSGRGLPGAKGEPGPAGPPGHVGEPGVGTTGPKGDRGSPGPVG 634
Score = 99 (39.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/105 (37%), Positives = 47/105 (44%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGP-GDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG+K +RG D+ RGP G GP G K E PG G PG PG K + GP
Sbjct: 551 PGEKGDRG--DRGSRGPPGSSGAAGPPGAKGE--PGSLGMMGLPGPSGRGLPGAKGEPGP 606
Query: 122 -GDKEKRGPGDKEERGP-GDKEERGP-GDKEERGQGDKEKRG-PG 162
G G GP GD+ GP G + +G G +G PG
Sbjct: 607 AGPPGHVGEPGVGTTGPKGDRGSPGPVGPQGMKGDGYPGPQGLPG 651
Score = 99 (39.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 42/119 (35%), Positives = 61/119 (51%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERG-PGDREKRG---PGDKEERG-PGDKE 117
PG K G PG GP + +GP GD +G PG R G PG+K +RG G++
Sbjct: 690 PGPKGAVGQPGAPGLSGPPGEGIQGPKGDPGFQGLPGPRGPPGDGLPGEKGDRGLSGERG 749
Query: 118 KRGPGDKEKRG-PGDKEERG-PGDKEERGPG-DKEERGQGDKEKRGPGDKEERAPGGLV 173
++G ++ + G PG +G PG+K + PG +EE + +E G G K +P LV
Sbjct: 750 RKG--ERGEHGMPGQTGSKGKPGEKGD--PGLSREEVIKIIREICGCGVKCRTSPLELV 804
Score = 53 (23.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERG-PGDKEERGP-GDKKARGP 33
RG R DK G PGD GP G K RGP
Sbjct: 322 RGPRG-DKGLTGNPGDTGPEGPVGSKGERGP 351
Score = 50 (22.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 6 GERASDKEE-RG-PGDKEERGPGDKKARGP 33
GER + +G PG+K +RG D+ +RGP
Sbjct: 538 GERGQEGSPGKGIPGEKGDRG--DRGSRGP 565
Score = 39 (18.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+GER PGD PG K +G
Sbjct: 346 KGERGPSGPTGPPGDPGVGFPGAKGEKG 373
>UNIPROTKB|F1MTP1 [details] [associations]
symbol:F1MTP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005583 "fibrillar collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 GO:GO:0005201 GO:GO:0005583
SMART:SM00210 GeneTree:ENSGT00700000104301 OMA:YSYPDRL
EMBL:DAAA02024580 EMBL:DAAA02024581 EMBL:DAAA02024582
IPI:IPI00699524 Ensembl:ENSBTAT00000001200 Uniprot:F1MTP1
Length = 1835
Score = 132 (51.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
G+K E+G K + PG +RGP GD+ +RG PGD G G + RG PG + + G
Sbjct: 1302 GEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGH 1361
Query: 121 PGDKEKRGP-GDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
PG + + GP G K E GP K+ + G RG QG + GP G + P G+
Sbjct: 1362 PGPRGRPGPKGSKGEEGPKGKQGKA-GAPGRRGIQGLQGLPGPRGVVGRQGPEGV 1415
Score = 131 (51.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 44/110 (40%), Positives = 57/110 (51%)
Query: 72 GP-GDKEKRGPGDKEERGPGDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG-PGDKEK 126
GP G+K ++G K E PG +RGP GDR RG PGD G G + RG PG + +
Sbjct: 1299 GPKGEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQ 1358
Query: 127 RG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGGLV 173
G PG + GP G K E GP K+ + G +RG G + P G+V
Sbjct: 1359 PGHPGPRGRPGPKGSKGEEGPKGKQGKA-GAPGRRGIQGLQGLPGPRGVV 1407
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 762 GKRGKMGRPGFPGDFGERGP 781
Score = 37 (18.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 65 PGDKEERGP 73
PGD ERGP
Sbjct: 773 PGDFGERGP 781
>WB|WBGene00020550 [details] [associations]
symbol:T17H7.1 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
GO:GO:0009792 GO:GO:0019915 InterPro:IPR003677 Pfam:PF02520
EMBL:FO080638 PIR:T28899 RefSeq:NP_497250.1
ProteinModelPortal:Q22537 PaxDb:Q22537 EnsemblMetazoa:T17H7.1
GeneID:175228 KEGG:cel:CELE_T17H7.1 UCSC:T17H7.1 CTD:175228
WormBase:T17H7.1 eggNOG:NOG271901 GeneTree:ENSGT00700000104820
HOGENOM:HOG000020548 InParanoid:Q22537 OMA:GRGQGPD NextBio:887312
Uniprot:Q22537
Length = 682
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 53/177 (29%), Positives = 68/177 (38%)
Query: 6 GERASDKEERGPGDKEERGPG-DKK--ARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
GER ++ GP D G KK ARGP
Sbjct: 248 GERGQ-RQNFGPSDNLTNGNQFSKKQFARGPSSMNSDLSENSQHSDSNSQFDFPRGPGGR 306
Query: 63 XXPGDKEERGPGDKEKRGPGDK---EERGPGDKEERGPGDREKRGPG-DKEERG--PGDK 116
G + GPG + RG G ++ PG + GPG R RG G D E + PG +
Sbjct: 307 GGRGQGPDFGPGGQGGRGQGPDFGPQDDFPGRRGSGGPGGRGGRGQGPDFEPQDDFPGRR 366
Query: 117 EKRGPGDKEKRGPGDK---EERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
GPG + RG G ++ PG + GPG + RGQG GPG + R G
Sbjct: 367 GSGGPGRRGGRGQGPDFGPQDDFPGRRGSGGPGGRGGRGQGPDF--GPGRQGGRGQG 421
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/170 (28%), Positives = 63/170 (37%)
Query: 11 DKEERGPGDKEER---GPGDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGD 67
D +RG G++ +R GP D G
Sbjct: 241 DNNQRGSGERGQRQNFGPSDNLTNGNQFSKKQFARGPSSMNSDLSENSQHSDSNSQFDFP 300
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
RGPG + RG G + GPG + RG G GP D PG + GPG + R
Sbjct: 301 ---RGPGGRGGRGQGP--DFGPGGQGGRGQGP--DFGPQDDF---PGRRGSGGPGGRGGR 350
Query: 128 GPG-DKEERG--PGDKEERGPGDKEERGQGDK---EKRGPGDKEERAPGG 171
G G D E + PG + GPG + RGQG + PG + PGG
Sbjct: 351 GQGPDFEPQDDFPGRRGSGGPGRRGGRGQGPDFGPQDDFPGRRGSGGPGG 400
Score = 117 (46.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 41/120 (34%), Positives = 55/120 (45%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGP-GDREKRG--PGDKEERGPGDKEKR-- 119
PG + GP ++ RG G + GPG + RG D + PG + GPG + +
Sbjct: 472 PGRRGSGGPEGRDGRGQGP--DFGPGSQGGRGQDSDSGSQDAFPGRRGSGGPGGRGQGPD 529
Query: 120 -GPGDK--EKRGPGDKEER-GPGDKEERGPGDKEERGQ-GDKEKRG--PGDKEERAPGGL 172
GP D +RG G E R G G + GPG + RGQ D + PG + PGGL
Sbjct: 530 FGPQDDFPGRRGSGGPEGRDGRGQGPDFGPGSQGGRGQDSDSGSQDAFPGRRGPGGPGGL 589
Score = 112 (44.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 65 PGDKEERGPGDKEKRGPG-DKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG--- 120
PG + GPG + + GP ++ PG + GP R+ RG G + GPG + RG
Sbjct: 513 PGRRGSGGPGGRGQ-GPDFGPQDDFPGRRGSGGPEGRDGRGQGP--DFGPGSQGGRGQDS 569
Query: 121 --------PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQG-DKEKRGPGDK 164
PG + GPG RG G + GPG + +RGQG D R G++
Sbjct: 570 DSGSQDAFPGRRGPGGPGGLGGRGQGP--DFGPGGQGDRGQGPDFGARSQGNR 620
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/112 (36%), Positives = 49/112 (43%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGD--KEERGPGDKEKRGP- 121
PG + GPG + RG G + GPG + RG G GP D RG G RG
Sbjct: 390 PGRRGSGGPGGRGGRGQGP--DFGPGRQGGRGQGP--DFGPQDDFSGRRGSGGPGGRGGR 445
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDK--EERGQGDKEKR-GPGDKEERAPG 170
G + GPG + RG G + GP D RG G E R G G + PG
Sbjct: 446 GQEPDFGPGGQGGRGQGP--DFGPQDDFPGRRGSGGPEGRDGRGQGPDFGPG 495
Score = 105 (42.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 35/109 (32%), Positives = 50/109 (45%)
Query: 66 GDKEERGPGDK--EKRGPGDKEER-GPGDKEERGPGDREKRGPGD---KEERGPGDKEKR 119
G + GP D +RG G E R G G + GPG + RG ++ PG +
Sbjct: 460 GQGPDFGPQDDFPGRRGSGGPEGRDGRGQGPDFGPGSQGGRGQDSDSGSQDAFPGRRGSG 519
Query: 120 GPGDKEKRGPG-DKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
GPG + + GP ++ PG + GP ++ RGQG GPG + R
Sbjct: 520 GPGGRGQ-GPDFGPQDDFPGRRGSGGPEGRDGRGQGPDF--GPGSQGGR 565
Score = 38 (18.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 6 GERASDKEER--GPGDKEERGPGDKKARG 32
G R S E G G + GPG + RG
Sbjct: 473 GRRGSGGPEGRDGRGQGPDFGPGSQGGRG 501
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 16 GPGDKEERGPGDKKARG 32
G G + + GPG + RG
Sbjct: 444 GRGQEPDFGPGGQGGRG 460
>ZFIN|ZDB-GENE-060312-44 [details] [associations]
symbol:neflb "neurofilament, light polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-060312-44 GO:GO:0005198 GO:GO:0005882
HOVERGEN:HBG013015 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 KO:K04572
EMBL:BC114232 IPI:IPI00742516 RefSeq:NP_001034927.1
UniGene:Dr.162322 ProteinModelPortal:Q29RE8 SMR:Q29RE8 PRIDE:Q29RE8
GeneID:664698 KEGG:dre:664698 CTD:664698 InParanoid:Q29RE8
NextBio:20902314 Bgee:Q29RE8 Uniprot:Q29RE8
Length = 579
Score = 125 (49.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 67 DKEERGPGDKEKRGPGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
++EE ++ + G +KEE G+KEE ++E+ + EE G E+ G ++E
Sbjct: 468 EEEEEEQQEEAEEGEEEKEEEEEEGEKEEEEEEEKEEEEKEEGEEGGEEGGEEEGEQEEE 527
Query: 126 KRGPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERA 168
KEE G GD+ E +K++ G+ +++K+G +K+ +A
Sbjct: 528 GEEEEGKEEGGEEGDEGEEDEAEKDDAGKEEEKKKGGEEKDSKA 571
Score = 118 (46.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/106 (26%), Positives = 58/106 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KEE ++E++ ++ E ++EE G + E+ ++EE+ G++ G++E
Sbjct: 463 EKEEEEEEEEEQQEEAEEGEEEKEEEEEEGEKEEEEEEEKEEEEKEEGEEGGEEGGEEE- 521
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDK-EKRGPGDKEERAPGG 171
G++EE G ++ + G++ + G+ D+ EK G +EE+ GG
Sbjct: 522 ---GEQEEEGEEEEGKEEGGEEGDEGEEDEAEKDDAGKEEEKKKGG 564
Score = 110 (43.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
+EE G+KE+ +KEE + EE G E+ G ++EE G ++ K G++
Sbjct: 486 EEEEEEGEKEEEEEEEKEEEEKEEGEEGGEEGGEEEG--EQEEEGEEEEGKEEGGEEGDE 543
Query: 128 GPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDK 164
G D+ E+ G +EE+ G +E+ + +K K P +K
Sbjct: 544 GEEDEAEKDDAGKEEEKKKGGEEKDSKAEKAK--PKEK 579
Score = 33 (16.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 2 QACRGERASDKEERGPGDKEER 23
QA E + +KEE ++E++
Sbjct: 454 QAQEAEASPEKEEEEEEEEEQQ 475
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 126 (49.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
+EE G ++E DKEE G++ E G E+ + EE E+ +E+
Sbjct: 532 EEEEGGNEEEDEEEEDKEEE-EGEEMEEDEGKAEEEQELELEEENEEGVEEEEEEIEEEE 590
Query: 128 GPGDKEERGPGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGG 171
G EE G G +EE G KEE+ +G++EKR ++EE GG
Sbjct: 591 VEGADEEEGEGAEEEEGEESQKEEKEEGEEEKR---EQEEEEEGG 632
Score = 122 (48.0 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 68 KEERGPGDKEKRGPGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+EE G E+ G G +EE G KEE+ G+ EKR ++EE G +E+ + E+
Sbjct: 587 EEEEVEGADEEEGEGAEEEEGEESQKEEKEEGEEEKR---EQEEEEEGGEEEEEVEEVEE 643
Query: 127 RGPGDKEERGPGDKEERGPGD-KEERGQGDKEKR 159
G + E+ G ++EE G+ +EE + K+KR
Sbjct: 644 GGNEEDEDEGQEEEEEDREGEEREEEEEKTKDKR 677
Score = 122 (48.0 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-GDKEERGPGDKEKRGPGDKEK 126
+EE G +E+ ++EE D+EE G G E+ G KEE+ G++EKR ++E+
Sbjct: 572 EEENEEGVEEEEEEIEEEEVEGADEEE-GEGAEEEEGEESQKEEKEEGEEEKR---EQEE 627
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G +EE + EE G + E+ GQ ++E+ G++ E
Sbjct: 628 EEEGGEEEEEVEEVEEGGNEEDEDEGQEEEEEDREGEERE 667
Score = 34 (17.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 7 ERASDKEERGPGDKEE 22
E+ +K+E G G E+
Sbjct: 474 EKKHEKDEPGEGSAED 489
Score = 34 (17.0 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
++ +EE G ++E+ DK+
Sbjct: 527 QKQKKEEEEGGNEEEDEEEEDKE 549
>UNIPROTKB|Q9BXS0 [details] [associations]
symbol:COL25A1 "Collagen alpha-1(XXV) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0008201 "heparin binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0005887
"integral to plasma membrane" evidence=IDA] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] Reactome:REACT_118779 GO:GO:0005615
GO:GO:0005887 GO:GO:0030198 GO:GO:0008201 GO:GO:0005788
GO:GO:0001540 HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 EMBL:AC097473 EMBL:AF293340
EMBL:AF293341 EMBL:AC073427 EMBL:AC095066 EMBL:AC004701
EMBL:AC004051 IPI:IPI00186946 IPI:IPI00942774 IPI:IPI00953070
RefSeq:NP_115907.2 RefSeq:NP_942014.1 UniGene:Hs.658842
ProteinModelPortal:Q9BXS0 STRING:Q9BXS0 PhosphoSite:Q9BXS0
DMDM:296434459 PaxDb:Q9BXS0 PRIDE:Q9BXS0 Ensembl:ENST00000399126
Ensembl:ENST00000399132 GeneID:84570 KEGG:hsa:84570 UCSC:uc003hze.1
UCSC:uc003hzg.3 CTD:84570 GeneCards:GC04M109731 H-InvDB:HIX0004434
HGNC:HGNC:18603 HPA:HPA029107 MIM:610004 neXtProt:NX_Q9BXS0
PharmGKB:PA134912284 HOVERGEN:HBG101380 OrthoDB:EOG4K3KWH
GenomeRNAi:84570 NextBio:74464 ArrayExpress:Q9BXS0 Bgee:Q9BXS0
CleanEx:HS_COL25A1 Genevestigator:Q9BXS0 Uniprot:Q9BXS0
Length = 654
Score = 117 (46.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 46/119 (38%), Positives = 57/119 (47%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERG-PGDREKRG-PGDKEERG-PGDKEKRG 120
GD E GP GD ++G PG G+ E G PG + + G PG G G+ G
Sbjct: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIG 347
Query: 121 P-GDKEKRG-PGDKEERG---PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
P G+ G PG K ERG P + ERG PG +G QG+ RGP G K +R G
Sbjct: 348 PQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
Score = 113 (44.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 46/115 (40%), Positives = 55/115 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDKEKRG- 120
PG K E PG++ ++G D E GP GD E+G PG G+ E G PG K + G
Sbjct: 275 PGPKGE--PGEQGEKG--DAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGL 330
Query: 121 PGDKEKRGPGDKEERG-PGDKEERG----PGDKEERGQGDKEKRGPGDKEERAPG 170
PG PG K E G G + E G PG K ERG+ RG E APG
Sbjct: 331 PGLPGL--PGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERG-EPGAPG 382
Score = 108 (43.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 53/163 (32%), Positives = 64/163 (39%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
G + E+ GD E GP GD +G P
Sbjct: 276 GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPG 335
Query: 64 XPGDKEERG---P-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEK 118
PG K E G P G+ G PG K ERG E GP R +RG E PG K K
Sbjct: 336 LPGIKGEPGFIGPQGEPGLPGLPGTKGERG-----EAGPPGRGERG----EPGAPGPKGK 386
Query: 119 RGPGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKE 157
+G + RGP G K +RG GD +GP G ++G QG E
Sbjct: 387 QG--ESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATE 427
Score = 100 (40.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 40/104 (38%), Positives = 50/104 (48%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG 120
G+ E G PG K + G PG G G+ GP G+ G PG K ERG E
Sbjct: 314 GEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERG----EAGP 369
Query: 121 PGDKEKRGPGDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP 161
PG E+ PG +G G+ RGP G K +RG+ GD +GP
Sbjct: 370 PGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGP 413
Score = 46 (21.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 5 RGERASDKEERGP-GDKEERG-PGDKKA 30
+GE+ D E GP GD E+G PG A
Sbjct: 284 QGEKG-DAGENGPKGDTGEKGDPGSSAA 310
Score = 42 (19.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERGP----GDKKARG 32
RG+R E PG +GP GDK +G
Sbjct: 128 RGKRGRRGESGPPGQPGPQGPPGPKGDKGEQG 159
>UNIPROTKB|B4GDX4 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7234 "Drosophila persimilis" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743 EMBL:CH479182
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 OrthoDB:EOG4905QZ
RefSeq:XP_002017535.1 GeneID:6592091 KEGG:dpe:Dper_GL22350
FlyBase:FBgn0159942 Uniprot:B4GDX4
Length = 1173
Score = 139 (54.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG-DK 124
G++ ERG GD+ +RG GD+ ERG G++ ERG GDR RG G++ +RG G++ +RG D+
Sbjct: 938 GERMERG-GDRMERG-GDRMERG-GERTERG-GDRMDRG-GERMDRG-GERGERGADRDR 991
Query: 125 EKR-GPG-DKEERGPGDKE-ERGPGDKEERGQG------DKEKRGPGDKE 165
E+R G D R + + +RG G K+ G DK +RG GD++
Sbjct: 992 ERRDNEGADSSWRVRREPDSQRGAGVKDASGSAAPPSRDDKWRRG-GDRD 1040
Score = 108 (43.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGP--GDREKRGPGDKEERGPGD-KEKRGP-GD 123
KE+R D+ R + ER +++ P GDR G G+ + P GD
Sbjct: 870 KEDR---DRLAREVAVERERSDKERDTWRPRGGDRPSAAAAGGGG-GAGEWRRAAAPIGD 925
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ +R GD+ ERG G++ ERG GD+ ERG GD+ +RG G++ ER GG
Sbjct: 926 RNERA-GDRIERG-GERMERG-GDRMERG-GDRMERG-GERTER--GG 966
Score = 99 (39.9 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 66 GDKEERGPGDKEKRGPG-DKEERGPGDKEERGPGDRE---KRGPGDKEERG----PG--D 115
G++ +RG G++ +RG D+E R + RE +RG G K+ G P D
Sbjct: 973 GERMDRG-GERGERGADRDRERRDNEGADSSWRVRREPDSQRGAGVKDASGSAAPPSRDD 1031
Query: 116 KEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
K +RG GD+++ D++ R G + +R D +RG G + GP ++ AP
Sbjct: 1032 KWRRG-GDRDR--DRDRDFRNDGPRRDRDDRDDRDRG-GFRRNDGPRRNDDAAP 1081
Score = 99 (39.9 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 34/113 (30%), Positives = 48/113 (42%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGP---GDREKRGPGDKEERGP--GDKEKRGP 121
D++ R G + R D +RG G + GP D R G P D++ R P
Sbjct: 1044 DRDFRNDGPRRDRDDRDDRDRG-GFRRNDGPRRNDDAAPRETGGNWRDAPRQSDRDNRRP 1102
Query: 122 -GDKEKRGPGDKEERGPGDK--EERGP--GDKEERGQGDKEKRGPGDKEERAP 169
GD+ R + RGP + +E GP G G G + PG ++E AP
Sbjct: 1103 AGDRRDREVRGGDLRGPESRAPKEGGPSGGTGTAAGGGGNWRTAPGPRDEPAP 1155
Score = 97 (39.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 75 DKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGP---GDKEKRGPGD 131
DK +RG GD++ D++ R G R R D +RG G + GP D R G
Sbjct: 1031 DKWRRG-GDRDR--DRDRDFRNDGPRRDRDDRDDRDRG-GFRRNDGPRRNDDAAPRETGG 1086
Query: 132 KEERGP--GDKEERGP-GDKEERGQGDKEKRGPGDKEERAP--GG 171
P D++ R P GD+ +R + RGP E RAP GG
Sbjct: 1087 NWRDAPRQSDRDNRRPAGDRRDREVRGGDLRGP---ESRAPKEGG 1128
Score = 69 (29.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
R ERA D+ ERG G++ ERG GD+ RG
Sbjct: 926 RNERAGDRIERG-GERMERG-GDRMERG 951
Score = 63 (27.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
R ER D+ ERG G++ ERG GD+ RG
Sbjct: 947 RMERGGDRMERG-GERTERG-GDRMDRG 972
Score = 63 (27.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
R ER D+ ERG GD+ ERG G++ RG
Sbjct: 940 RMERGGDRMERG-GDRMERG-GERTERG 965
>UNIPROTKB|F1NR04 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005588 "collagen type V" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0032964 "collagen biosynthetic process" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043206 "extracellular fibril organization"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0045112 "integrin
biosynthetic process" evidence=IEA] [GO:0048407 "platelet-derived
growth factor binding" evidence=IEA] [GO:0048592 "eye
morphogenesis" evidence=IEA] [GO:0051128 "regulation of cellular
component organization" evidence=IEA] GO:GO:0030199 GO:GO:0008201
GO:GO:0007155 GO:GO:0035313 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 GO:GO:0043206 GO:GO:0005201 GO:GO:0005588
GO:GO:0045112 GO:GO:0051128 GeneTree:ENSGT00700000104155
EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026427
EMBL:AADN02026428 EMBL:AADN02026429 EMBL:AADN02026430
EMBL:AADN02026431 EMBL:AADN02026432 IPI:IPI00819487
Ensembl:ENSGALT00000039033 ArrayExpress:F1NR04 Uniprot:F1NR04
Length = 280
Score = 108 (43.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 162 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 218
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 219 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 271
Score = 98 (39.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 44/109 (40%), Positives = 53/109 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 52 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPA 111
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E G PG K ERG+ K + GP
Sbjct: 112 GGIGNPGAVGEKGEPGESGEPGLPG---EVGLPGPKGERGE--KGEAGP 155
Score = 40 (19.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 18 GDKEERGP-GDKKARGP 33
GDK E+GP G +GP
Sbjct: 10 GDKGEQGPPGPTGPQGP 26
>TAIR|locus:2183399 [details] [associations]
symbol:GRP16 "glycine-rich protein 16" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM;IDA] [GO:0012511 "monolayer-surrounded lipid storage
body" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019915 "lipid
storage" evidence=ISS] [GO:0045735 "nutrient reservoir activity"
evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS] [GO:0019953
"sexual reproduction" evidence=RCA;IMP] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] InterPro:IPR000136 Pfam:PF01277
PROSITE:PS00811 GO:GO:0016021 EMBL:CP002688 GO:GO:0008289
EMBL:AL163912 GO:GO:0012511 ProtClustDB:CLSN2690871 EMBL:BT003862
EMBL:BT005157 IPI:IPI00547253 PIR:T49893 RefSeq:NP_196371.1
UniGene:At.47255 STRING:Q9LY08 PRIDE:Q9LY08
EnsemblPlants:AT5G07540.1 GeneID:830647 KEGG:ath:AT5G07540
TAIR:At5g07540 HOGENOM:HOG000143522 OMA:SGDKPGE PhylomeDB:Q9LY08
ArrayExpress:Q9LY08 Genevestigator:Q9LY08 Uniprot:Q9LY08
Length = 244
Score = 128 (50.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 39/110 (35%), Positives = 41/110 (37%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDRE--KRG--PGDKEERGPGDKEKRGP 121
GDK G +K PG GPG G G G GPG GP
Sbjct: 131 GDKPGGASGGGDK--PGGASGGGPGGASGGASGGASGGASGGASGGASGGGPGGASGGGP 188
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G GPG GDK E PGDK G K + PG K E A GG
Sbjct: 189 GGASGGGPGGASGGASGDKPEGAPGDKPGGAWGGKPGKKPGHKPEGARGG 238
Score = 109 (43.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/96 (33%), Positives = 35/96 (36%)
Query: 65 PGDKEERGPGDKEKRGPGDKE--ERG--PGDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
PG GPG G G G GPG GPG GPG
Sbjct: 144 PGGASGGGPGGASGGASGGASGGASGGASGGASGGGPGGASGGGPGGASGGGPGGASGGA 203
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDK 156
GDK + PGDK G K + PG K E +G K
Sbjct: 204 SGDKPEGAPGDKPGGAWGGKPGKKPGHKPEGARGGK 239
>UNIPROTKB|Q767K9 [details] [associations]
symbol:PPP1R10 "Serine/threonine-protein phosphatase 1
regulatory subunit 10" species:9823 "Sus scrofa" [GO:0000785
"chromatin" evidence=ISS] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0004864
"protein phosphatase inhibitor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000571
InterPro:IPR003617 InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711
PROSITE:PS50103 PROSITE:PS51319 SMART:SM00356 SMART:SM00509
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0000785 GO:GO:0006351 GO:GO:0003723 EMBL:AB113357
GO:GO:0004864 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0072357
CTD:5514 eggNOG:NOG69306 HOGENOM:HOG000049285 HOVERGEN:HBG053646
OMA:PPPHEHR OrthoDB:EOG451DQK GeneTree:ENSGT00530000063820
RefSeq:NP_001116637.1 UniGene:Ssc.39454 ProteinModelPortal:Q767K9
Ensembl:ENSSSCT00000001463 Ensembl:ENSSSCT00000034462
GeneID:100144450 KEGG:ssc:100144450 ArrayExpress:Q767K9
Uniprot:Q767K9
Length = 925
Score = 124 (48.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 32/98 (32%), Positives = 38/98 (38%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
PG G G + GPG G G + GPG G G + GPG G G +
Sbjct: 744 PGGGMVGGGGHRPHEGPGGGMSSGSGHRPHEGPGGG--MGGGHRPHEGPGGG--MGGGHR 799
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPG 162
GPG G G + GPG G G + GPG
Sbjct: 800 PHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPG 837
Score = 120 (47.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/99 (32%), Positives = 37/99 (37%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G G R GPG G G + GPG G G
Sbjct: 743 GPGGGMVGGGGHRPHEGPGGGMSSGSGHRPHEGPGGG--MGGGHRPHEGPGGG--MGGGH 798
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
+ GPG G G + G G G G + PG
Sbjct: 799 RPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPG 837
Score = 118 (46.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/106 (31%), Positives = 39/106 (36%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 769 GHRPHEGPGGG--MGGGHRPHEGPGGG--MGGGHRPHEGPGGGMGGGSGHRPHEGPGGGM 824
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G G + GPG G + G + RGP E R G
Sbjct: 825 GAGGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDG 870
Score = 109 (43.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/99 (30%), Positives = 36/99 (36%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 783 GHRPHEGPGGG--MGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGG 840
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
G + G + RGP E RG G G +
Sbjct: 841 PHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 879
Score = 100 (40.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/98 (30%), Positives = 35/98 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G + G +
Sbjct: 797 GHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGGPHGHRPHDVPGHRGHD 856
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQ----GDKEKR 159
RGP E RG G G + G GD KR
Sbjct: 857 HRGPPPHEHRGHDGPGHGGGGHRGHDGGHNHGGDMSKR 894
Score = 38 (18.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 677 RG-GDPFWDGPGDPMRGGP 694
Score = 36 (17.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 12 KEERGPGDKEERGPGDKKARGP 33
+ GPG G G + GP
Sbjct: 755 RPHEGPGGGMSSGSGHRPHEGP 776
Score = 35 (17.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 677 RGGDPFWDGPGDPMRGGP 694
>UNIPROTKB|Q14050 [details] [associations]
symbol:COL9A3 "Collagen alpha-3(IX) chain" species:9606
"Homo sapiens" [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0005594 "collagen type IX" evidence=IDA]
[GO:0030020 "extracellular matrix structural constituent conferring
tensile strength" evidence=IC] Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0008585 GO:GO:0030198 GO:GO:0008584 GO:GO:0005788
HOGENOM:HOG000085653 InterPro:IPR008160 Pfam:PF01391 MIM:603932
HOVERGEN:HBG004933 GO:GO:0030020 Orphanet:166002 KO:K08131
GO:GO:0005594 eggNOG:NOG297550 OrthoDB:EOG43N7D8 EMBL:L41162
EMBL:AF026802 EMBL:AF026801 EMBL:AL035669 EMBL:BC011705 EMBL:X91013
IPI:IPI00289999 RefSeq:NP_001844.3 UniGene:Hs.716639
ProteinModelPortal:Q14050 IntAct:Q14050 STRING:Q14050
PhosphoSite:Q14050 DMDM:20137327 PaxDb:Q14050 PRIDE:Q14050
DNASU:1299 Ensembl:ENST00000343916 GeneID:1299 KEGG:hsa:1299
UCSC:uc002ydm.3 CTD:1299 GeneCards:GC20P061447 HGNC:HGNC:2219
HPA:HPA040125 MIM:120270 MIM:600969 neXtProt:NX_Q14050
PharmGKB:PA26735 InParanoid:Q14050 OMA:PAGSIGH PhylomeDB:Q14050
ChiTaRS:COL9A3 GenomeRNAi:1299 NextBio:5275 ArrayExpress:Q14050
Bgee:Q14050 CleanEx:HS_COL9A3 Genevestigator:Q14050
GermOnline:ENSG00000092758 Uniprot:Q14050
Length = 684
Score = 112 (44.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 47/118 (39%), Positives = 55/118 (46%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERGPGDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG- 120
G+K ERG G+ + GP E PGD G G+ RG G +GP G RG
Sbjct: 346 GEKGERGRAGELGEAGPSG-EPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGF 404
Query: 121 PGDKEKRG-PGDKEERG-PGDKEERGPGDKE-ERG-QGDKEKRG-PGDKEERAPGGLV 173
G K G PG +G GD +RGPG +G QG G PGDK E P GLV
Sbjct: 405 QGQKGSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLV 462
Score = 47 (21.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 8 RASDKEERGPGDKEERGP-GDKKARGP 33
+A D+ ERGP + RGP GD GP
Sbjct: 263 KAGDRGERGP--EGFRGPKGDLGRPGP 287
>ZFIN|ZDB-GENE-050522-205 [details] [associations]
symbol:nefma "neurofilament, medium polypeptide a"
species:7955 "Danio rerio" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 ZFIN:ZDB-GENE-050522-205 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00560000076873 InterPro:IPR011098 PROSITE:PS51109
EMBL:CU467622 IPI:IPI00831776 Ensembl:ENSDART00000080256
ArrayExpress:F1QCR7 Bgee:F1QCR7 Uniprot:F1QCR7
Length = 849
Score = 126 (49.4 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 38/108 (35%), Positives = 59/108 (54%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREK---RGPGDKEERGPGDKEKRGPG 122
G+ EE G ++ G +KE+ G G++EE + K P ++EE G EK G G
Sbjct: 465 GEAEEGEEGGDDEEG--EKEDEGEGEEEEVVASTQAKVASAAPAEEEEEG----EKEG-G 517
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE-RAP 169
D+E+ ++EE G GD+EE G++EE + KE+ + EE +AP
Sbjct: 518 DEEQE---EEEEAGKGDEEEE-KGEEEEGEEEKKEEEAEEEAEESKAP 561
Score = 112 (44.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 69 EERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK-- 126
EE +++ G G EE G ++ E G GD E+ G+KE+ G G++E+ + K
Sbjct: 449 EELSAAKEDEEG-G--EEEGEAEEGEEG-GDDEE---GEKEDEGEGEEEEVVASTQAKVA 501
Query: 127 -RGPGDKEERGP---GDKEERGPGDKEERGQGDKEKRGPGDKEE 166
P ++EE G GD+E+ ++EE G+GD+E+ G++EE
Sbjct: 502 SAAPAEEEEEGEKEGGDEEQE---EEEEAGKGDEEEE-KGEEEE 541
Score = 111 (44.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 65 PGDKEERGP---GDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGD-KEKRG 120
P ++EE G GD+E+ ++EE G GD+EE G+ E+ KEE + +E +
Sbjct: 505 PAEEEEEGEKEGGDEEQE---EEEEAGKGDEEEE-KGEEEEGEEEKKEEEAEEEAEESKA 560
Query: 121 PGDK---EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE 165
P K E +K+ G G++E GD+ + G +K +KE
Sbjct: 561 PEAKASPESEKAEEKQASG-GEEEAEEEGDENQEGDAGSDKGSTDEKE 607
Score = 50 (22.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 2 QACRGERASDKEERGPGDKEERGPGDKK 29
+A GE D EE G+KE+ G G+++
Sbjct: 466 EAEEGEEGGDDEE---GEKEDEGEGEEE 490
Score = 39 (18.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 7 ERASDKEERGPGDKEE 22
+ +KE+ G G++EE
Sbjct: 476 DEEGEKEDEGEGEEEE 491
>RGD|71029 [details] [associations]
symbol:Col3a1 "collagen, type III, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development" evidence=IEP]
[GO:0001568 "blood vessel development" evidence=IEA;ISO] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005581 "collagen" evidence=ISO] [GO:0005586 "collagen type III"
evidence=ISO;TAS] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0009314 "response to radiation" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA;ISO] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032964 "collagen biosynthetic process"
evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0043206
"extracellular fibril organization" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA;ISO]
[GO:0050777 "negative regulation of immune response" evidence=IEA]
[GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA;ISO] InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093
Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51461 SMART:SM00038 SMART:SM00214 RGD:71029 GO:GO:0043588
GO:GO:0005615 GO:GO:0007507 GO:GO:0046872 GO:GO:0034097
GO:GO:0030199 GO:GO:0001501 GO:GO:0007179 GO:GO:0007229
GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0042060 GO:GO:0001568 GO:GO:0048565 GO:GO:0050777
GO:GO:0009314 GO:GO:0018149 GO:GO:0032964 GO:GO:0071230
GO:GO:0043206 GO:GO:0005201 GeneTree:ENSGT00660000095287
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 OrthoDB:EOG4FTW1C
CTD:1281 OMA:EGSPGHP GO:GO:0005586 EMBL:BC087039 EMBL:X70369
EMBL:AJ005395 EMBL:M21354 IPI:IPI00366944 PIR:S41067
RefSeq:NP_114474.1 UniGene:Rn.3247 ProteinModelPortal:P13941
IntAct:P13941 STRING:P13941 PRIDE:P13941 Ensembl:ENSRNOT00000004956
GeneID:84032 KEGG:rno:84032 UCSC:RGD:71029 InParanoid:P13941
NextBio:616623 Genevestigator:P13941 GermOnline:ENSRNOG00000003357
Uniprot:P13941
Length = 1463
Score = 119 (46.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 45/117 (38%), Positives = 54/117 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG RGP G G PG + G PG +G PG R +RG G GP G+ K
Sbjct: 406 PGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGK 465
Query: 119 RG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGG 171
G PG+ G PG+ ERG PG + GP G E+G E+ GPG R G
Sbjct: 466 DGSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPGEKGPAG-ERGGPGPAGPRGVAG 521
Score = 119 (46.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 49/125 (39%), Positives = 58/125 (46%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERG-PGDKEERG-PGDREKRGP-GDKEE 110
PG + ERG PG K + G PG+ G PG+ ERG PG R GP G E
Sbjct: 442 PGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPGE 501
Query: 111 RGPGDKEKRGPGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP-GDKEE 166
+GP E+ GPG RG G+ G PG RG PG G G+ K GP G + E
Sbjct: 502 KGPAG-ERGGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPG--GPGNDGKPGPPGSQGE 558
Query: 167 RA-PG 170
PG
Sbjct: 559 SGRPG 563
Score = 118 (46.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 47/120 (39%), Positives = 54/120 (45%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PGDKE 117
PGDK E G PG RG PG++ E GP PG + G PG K ERG PG+K
Sbjct: 775 PGDKGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGF-PGAPGQNGEPGAKGERGAPGEKG 833
Query: 118 KRGPGDKE--KRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ GP G G GP G K ERG PG G G + GP G+ P G
Sbjct: 834 EGGPPGAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPG 893
Score = 111 (44.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 42/102 (41%), Positives = 48/102 (47%)
Query: 72 GPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG-PGDKEERG-PGDK-EKRGPGDKE 125
GPG+ K GP G + E G PG GP G G PG K G PG E+ GPG
Sbjct: 543 GPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPG 602
Query: 126 KRGPGDKE-ERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PG 162
GP K E GP G G PGDK + G G + +G PG
Sbjct: 603 LPGPAGKNGETGPQGPPGPTGAPGDKGDAGPPGPQGLQGIPG 644
Score = 107 (42.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 47/127 (37%), Positives = 55/127 (43%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K E GP G G PGD+ GP G + +G PG
Sbjct: 589 PGKNGERGGPGGPGLPGPAGKNGETGPQGPPGPTGAPGDKGDAGPPGPQGLQGIPGTSGP 648
Query: 119 RGPGDKEKRG-PGDKEERG----PGDKEERG-PGDKEERG-------QGDKEKRGP-GDK 164
PG+ K G PG K E G PG K + G PG++ G +G GP G K
Sbjct: 649 --PGENGKPGEPGPKGEAGAPGVPGGKGDSGAPGERGPPGTAGTPGLRGGAGPPGPEGGK 706
Query: 165 EERAPGG 171
P G
Sbjct: 707 GPAGPPG 713
Score = 106 (42.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP----GDKEERGP-GDK 116
PG K E G PGD PG RG PG++ G PG RG G + GP G
Sbjct: 280 PGLKGENGLPGDNG--APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 337
Query: 117 EKRG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEER 167
G PG K + GP G G PG + E GP G +G G G PG K E
Sbjct: 338 GTAGFPGSPGAKGEVGPAGSPGSNGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEM 397
Query: 168 APGGL 172
P G+
Sbjct: 398 GPAGI 402
Score = 47 (21.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARGP 33
G D E PG ERG PG +GP
Sbjct: 224 GPAGKDGESGRPGRPGERGLPGPPGIKGP 252
Score = 41 (19.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
RGER PG K E G PG+ A G
Sbjct: 445 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 476
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
GE+ E GPG RG + R
Sbjct: 500 GEKGPAGERGGPGPAGPRGVAGEPGR 525
Score = 37 (18.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 17 PGDKEERGP-GDKKARG 32
PGDK + GP G + +G
Sbjct: 625 PGDKGDAGPPGPQGLQG 641
>UNIPROTKB|E1BF96 [details] [associations]
symbol:PPP1R10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR003617
InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 SMART:SM00509 GO:GO:0005634
GO:GO:0003677 GO:GO:0008270 GO:GO:0000785 GO:GO:0006351
Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0072357 CTD:5514
OMA:PPPHEHR GeneTree:ENSGT00530000063820 EMBL:DAAA02055402
IPI:IPI00698425 RefSeq:NP_001137335.1 UniGene:Bt.27784
Ensembl:ENSBTAT00000009104 GeneID:510825 KEGG:bta:510825
NextBio:20869636 Uniprot:E1BF96
Length = 924
Score = 123 (48.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 32/99 (32%), Positives = 37/99 (37%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G G R GPG G G + GPG G G
Sbjct: 742 GPGGGMVGGGGHRPHEGPGGGMNSGSGHRPHEGPGSG--MGGGHRPHEGPGGS--MGGGH 797
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
+ GPG G G + G G G G + PG
Sbjct: 798 RPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPG 836
Score = 121 (47.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 33/106 (31%), Positives = 39/106 (36%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 768 GHRPHEGPGSG--MGGGHRPHEGPGGS--MGGGHRPHEGPGGGMGGGSGHRPHEGPGGGM 823
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G G + GPG G + G + RGP E R G
Sbjct: 824 GAGGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDG 869
Score = 111 (44.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 30/99 (30%), Positives = 36/99 (36%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G G + GPG
Sbjct: 782 GHRPHEGPGGS--MGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGG 839
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
G + G + RGP E RG G G +
Sbjct: 840 PHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 878
Score = 103 (41.3 bits), Expect = 0.00042, P = 0.00042
Identities = 34/115 (29%), Positives = 42/115 (36%)
Query: 66 GDKEERGPGDKEKRGP---GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
GD GPGD + GP G GP + G G E P G + GP
Sbjct: 678 GDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPP 737
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGD------KEERAPGG 171
+ + GPG G G + GPG G G + GPG + PGG
Sbjct: 738 NG-RGGPGGGMVGGGGHRPHEGPGGGMNSGSGHRPHEGPGSGMGGGHRPHEGPGG 791
Score = 38 (18.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 676 RG-GDPFWDGPGDPMRGGP 693
Score = 36 (17.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 12 KEERGPGDKEERGPGDKKARGP 33
+ GPG G G + GP
Sbjct: 754 RPHEGPGGGMNSGSGHRPHEGP 775
Score = 35 (17.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 676 RGGDPFWDGPGDPMRGGP 693
>UNIPROTKB|J9P1G7 [details] [associations]
symbol:J9P1G7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR001304 Pfam:PF00059 PROSITE:PS50041 SMART:SM00034
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GeneTree:ENSGT00680000100098
EMBL:AAEX03017697 EMBL:AAEX03017698 Ensembl:ENSCAFT00000049520
Uniprot:J9P1G7
Length = 375
Score = 131 (51.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 40/109 (36%), Positives = 47/109 (43%)
Query: 66 GDKEERGPGD---KEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
G R P + + RGP RG G E R G G G E R G + RG
Sbjct: 31 GSNNRRAPPELLPERSRGP-PVARRGGGHTERRPHGAEAPGGRGHVEWRPHGAEATRGRS 89
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
E+R PG + RG G E R PG + RG+G E R PG E GG
Sbjct: 90 YLERRPPGAEATRGGGHLERRPPGAEATRGRGHLEWRPPG-AEATWSGG 137
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/110 (33%), Positives = 48/110 (43%)
Query: 70 ERGPGDKEKR----GPGDKEERGPGD---KEERGPGDREKRGPGDKEERGPGDKEKRGPG 122
++GPG + G G R P + + RGP +RG G E R G + G G
Sbjct: 15 DQGPGTPGAQTGGGGGGSNNRRAPPELLPERSRGP-PVARRGGGHTERRPHGAEAPGGRG 73
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGL 172
E R G + RG E R PG + RG G E+R PG + R G L
Sbjct: 74 HVEWRPHGAEATRGRSYLERRPPGAEATRGGGHLERRPPGAEATRGRGHL 123
>UNIPROTKB|Q7YR38 [details] [associations]
symbol:PPP1R10 "Serine/threonine-protein phosphatase 1
regulatory subunit 10" species:9598 "Pan troglodytes" [GO:0000785
"chromatin" evidence=ISS] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=ISS] InterPro:IPR000571 InterPro:IPR003617
InterPro:IPR017923 Pfam:PF00642 Pfam:PF08711 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 SMART:SM00509 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0000785
GO:GO:0006351 GO:GO:0003723 EMBL:BA000041 GO:GO:0004864
Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0072357 CTD:5514
eggNOG:NOG69306 HOGENOM:HOG000049285 HOVERGEN:HBG053646 OMA:PPPHEHR
GeneTree:ENSGT00530000063820 EMBL:AB210175 EMBL:AB210176
RefSeq:NP_001038965.1 UniGene:Ptr.6270 ProteinModelPortal:Q7YR38
Ensembl:ENSPTRT00000033108 GeneID:462544 KEGG:ptr:462544
NextBio:20841794 Uniprot:Q7YR38
Length = 940
Score = 123 (48.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 31/100 (31%), Positives = 36/100 (36%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
GPG G G + GPG G R GPG G G + GP G G
Sbjct: 740 GPGGGMVGGGGHRPHEGPGGGMGNNSGHRPHEGPGGG--MGSGHRPHEGPAGSMGGGGGH 797
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+ GPG G G + G G G G + PGG
Sbjct: 798 RPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 837
Score = 123 (48.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 31/106 (29%), Positives = 37/106 (34%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GP G G + GPG G G R GPG G G + GPG
Sbjct: 780 GHRPHEGPAGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSM 839
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G + GPG G + G + RGP E R G
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDG 885
Score = 119 (46.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/105 (28%), Positives = 36/105 (34%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G + GPG G G R GP G G + GPG
Sbjct: 750 GHRPHEGPGGGMGNNSGHRPHEGPGGG--MGSGHRPHEGPAGSMGGGGGHRPHEGPGGGI 807
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
G G + GPG G G + G G G + PG
Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPG 852
Score = 112 (44.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 29/99 (29%), Positives = 35/99 (35%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
G + GPG G G + GPG G G R GPG G + GPG
Sbjct: 796 GHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGG 855
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
G + G + RGP E RG G G +
Sbjct: 856 PHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 894
Score = 111 (44.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/98 (27%), Positives = 34/98 (34%)
Query: 72 GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGD 131
G G + GP G G + GPG G G + GPG G G + GPG
Sbjct: 778 GSGHRPHEGPAGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGG 837
Query: 132 KEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
G + GPG G + G + R P
Sbjct: 838 SMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGP 875
Score = 38 (18.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 15 RGPGDKEERGPGDKKARGP 33
RG GD GPGD GP
Sbjct: 674 RG-GDPFWDGPGDPMRGGP 691
Score = 35 (17.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 8 RASDKEERGPGDKEERGP 25
R D GPGD GP
Sbjct: 674 RGGDPFWDGPGDPMRGGP 691
>UNIPROTKB|F1NL02 [details] [associations]
symbol:COL22A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104250 OMA:KRENGAQ EMBL:AADN02037495
EMBL:AADN02037496 EMBL:AADN02037497 EMBL:AADN02037498
IPI:IPI00577055 Ensembl:ENSGALT00000026109 Uniprot:F1NL02
Length = 1588
Score = 121 (47.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 49/119 (41%), Positives = 56/119 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG----PGDKEERGP-GDREKRGPGDKEERGPGDKEK 118
PG E GP GP G+K E G PG RGP GD ++GP KE PG K
Sbjct: 1294 PGSAGEPGPAGNP--GPKGNKGENGSPGLPGFIGPRGPPGDPGEKGPPGKEG-APG---K 1347
Query: 119 RGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
G G K +RG PG K E+GP G K G PG +G G GP GD + P G
Sbjct: 1348 PGETGSKGERGEPGIKGEKGPQGQKGPPGEPGIPGHKGHPGLMGPHGPPGDTGQVGPPG 1406
Score = 45 (20.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 5 RGERASD--KEERG-PGDKEERGP-GDKKARGP 33
RGE+ K + G PG K ERG GD + GP
Sbjct: 779 RGEKGDQGGKGKDGLPGLKGERGEKGDTGSPGP 811
Score = 43 (20.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1 MQACRGERASDKEERGPGDKEERGP-GDKKARG 32
+Q +G++ + E PG+ GP G RG
Sbjct: 863 LQGTKGQKGAQGEAGAPGEAGAVGPVGPPGPRG 895
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE+ EE PG +G PG + G
Sbjct: 734 KGEQGEKGEEGSPGKAGPKGEPGSRGQPG 762
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 17 PGDKEERGPGDKKARGP 33
PG+ ERGP K P
Sbjct: 1045 PGNPGERGPPGKPGTSP 1061
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 2 QACRGERASDKEERGPGDKEERGPGDKKARGP 33
Q +GER + PGD+ G G GP
Sbjct: 983 QCLQGERGAPGLPGQPGDRGVPGVGLAGPPGP 1014
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARG 32
+GER S E G K E G PG + +G
Sbjct: 451 KGERGSIGPEGPKGQKGESGSQGLPGPRGEKG 482
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MQACRGERAS--DKEERG-------PGDKEERGP 25
+Q RGE+ + DK ERG PG + ++GP
Sbjct: 552 LQGERGEKGTRGDKGERGLDGFPGKPGVEGKQGP 585
Score = 35 (17.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 5 RGERASDKEERGPGDKEERG 24
RGE+ G+K E+G
Sbjct: 478 RGEKGESGRAYSRGEKGEKG 497
Score = 34 (17.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 17 PGDKEERGP-GDKKARGP 33
PGDK GP G GP
Sbjct: 1018 PGDKGSLGPRGVPGIPGP 1035
>UNIPROTKB|F1P4K9 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001502 "cartilage condensation"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0006029 "proteoglycan
metabolic process" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050910 "detection of mechanical stimulus involved in sensory
perception of sound" evidence=IEA] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 GO:GO:0006029
Pfam:PF02210 GO:GO:0005201 SMART:SM00210
GeneTree:ENSGT00700000104155 OMA:HPGKEGQ EMBL:AADN02012919
EMBL:AADN02012920 IPI:IPI00572094 Ensembl:ENSGALT00000008321
ArrayExpress:F1P4K9 Uniprot:F1P4K9
Length = 1807
Score = 119 (46.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 46/121 (38%), Positives = 58/121 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERG----PGDREKRGPGDKEERG-PGDK 116
PG + E GP G K + GP GD GP G+K + G PG ++GP K G PG
Sbjct: 805 PGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGRQGP--KGSTGFPGFP 862
Query: 117 EKRGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPG 170
G G + G PG + +RGP G + RGP G + G +G GP G ER P
Sbjct: 863 GANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGKPGPKGTSGNDGPPGPPGERGPQ 922
Query: 171 G 171
G
Sbjct: 923 G 923
Score = 111 (44.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 47/117 (40%), Positives = 55/117 (47%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEK 118
G+K E GP G +GP GD +G PG PGD G PG + G G EK
Sbjct: 1280 GEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGF--PGDPGPPGEPGPAGQDGVGG-EK 1336
Query: 119 RGPGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPG 170
GD + GP G E GP G +RGP G G QG+K +G PG E APG
Sbjct: 1337 GEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPG--AEGAPG 1391
Score = 110 (43.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 43/112 (38%), Positives = 54/112 (48%)
Query: 72 GPGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEKRGP-GDKE 125
GPG +G G+ +GP G + GP G KRG PG RG PG+ +G G
Sbjct: 544 GPGAAGAKGESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDG 603
Query: 126 KRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGGLV 173
G PGDK RG G + G PG+ R QG+ + GP G E P GL+
Sbjct: 604 LPGLPGDKGNRGDRGPQGPPGLPGEDGSRKQGEDGEVGPRGLPGEAGPRGLL 655
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/113 (37%), Positives = 53/113 (46%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRG- 120
G+K E PG+ GP G+ GP G++ E+G G GP G K PGD +G
Sbjct: 1253 GEKGE--PGEAGNPGPPGESGTSGPKGERGEKGEAGPPGAAGPPGAKGP--PGDDGPKGN 1308
Query: 121 PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGG 171
PG G PG E GP ++ G G+K E GD + GP G E P G
Sbjct: 1309 PGPVGFPGDPGPPGEPGPAGQDGVG-GEKGE--DGDPGQPGPPGPSGEAGPPG 1358
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/118 (36%), Positives = 53/118 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEE-RGP-GDREKRGP-GDKEERGPGDKEKRG- 120
PG + GP EK PG+K +GP ++ +GP G GP G E GDK + G
Sbjct: 1078 PGPQGPPGPAG-EKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSPGE--DGDKGEIGE 1134
Query: 121 PGDKEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEK--RGP----GDKEERAPGG 171
PG K +G DK E GP G +GP GD E RG G K + P G
Sbjct: 1135 PGQKGSKG--DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRG 1190
Score = 104 (41.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 45/118 (38%), Positives = 55/118 (46%)
Query: 66 GDKEERG----PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGP-GDKE 117
G+K + G PG ++GP G G PG E+G R G PG + +RGP G +
Sbjct: 833 GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGA--RGLHGKPGPRGQRGPTGPRG 890
Query: 118 KRGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
RGP G K GP G GP G ERGP G + G G K GP K+ PG
Sbjct: 891 SRGPRGPTGKPGPKGTSGNDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG-LPG 947
Score = 100 (40.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/117 (36%), Positives = 51/117 (43%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGPGDKEKR 119
PG E GP G KRGP G G G+K +G PG G G +GP K
Sbjct: 1348 PGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGK--- 1404
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
PG + RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 1405 -PGPEGLRGIPGPVGEQGLPGAPGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 1459
Score = 50 (22.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + +RGP G + +RGP
Sbjct: 866 GEKGARGLHGKPGPRGQRGPTGPRGSRGP 894
Score = 48 (22.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+G+R D PGDK RG D+ +GP
Sbjct: 596 KGDRGFDGLPGLPGDKGNRG--DRGPQGP 622
Score = 46 (21.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E GP G +GP
Sbjct: 1129 KGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1158
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 798 DRGEVGQPGPRGEDGPEGPKGRAGP 822
Score = 41 (19.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PG+K +GP G +GP
Sbjct: 1089 EKGAPGEKGPQGPAGRDGVQGP 1110
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD ERGP
Sbjct: 464 PGDPGERGP 472
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E G G K RG
Sbjct: 1253 GEKGEPGEAGNPGPPGESGTSGPKGERG 1280
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + + PG ERGP + +GP
Sbjct: 902 GPKGTSGNDGPPGPPGERGP--QGPQGP 927
Score = 35 (17.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
RG+R PG+ R G+ GP
Sbjct: 614 RGDRGPQGPPGLPGEDGSRKQGEDGEVGP 642
Score = 34 (17.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G +D PG++ +GP G GP
Sbjct: 904 KGTSGNDGPPGPPGERGPQGPQGPVGFPGP 933
>UNIPROTKB|I3LDG8 [details] [associations]
symbol:I3LDG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 GeneTree:ENSGT00700000104301 EMBL:CU861519
Ensembl:ENSSSCT00000029470 OMA:HENEALG Uniprot:I3LDG8
Length = 1358
Score = 122 (48.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/126 (34%), Positives = 56/126 (44%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPG-DKEKRGPG 122
G+K E+G K + PG +RGP GD+ +RG PGD G G ER P + P
Sbjct: 731 GEKGEQGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGGGWVGERDPSRPRAPLSPS 790
Query: 123 DKEKRGPGDK-------EERGP-GDKEERG-------PGDKEERGQ-GDKEKRGP-GDKE 165
E PG E+RGP G + G PG + + G G + + GP G K
Sbjct: 791 GAENSSPGRSRGHKPLHEQRGPPGSAGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKG 850
Query: 166 ERAPGG 171
E P G
Sbjct: 851 EEGPKG 856
Score = 120 (47.3 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 40/120 (33%), Positives = 53/120 (44%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPG-DREKRGPGDKEERGPGDKEKRGP 121
PG +RGP GD+ RG PGD G G ER P R P E PG P
Sbjct: 746 PGPPGDRGPVGDRGDRGEPGDPGYPGGGWVGERDPSRPRAPLSPSGAENSSPGRSRGHKP 805
Query: 122 GDKEKRGPGDKEERG-------PGDKEERG-PGDKEERG-QGDKEKRGPGDKEERA--PG 170
+++ PG + G PG + + G PG + G +G K + GP K+ +A PG
Sbjct: 806 LHEQRGPPGSAGQEGVQGLRGNPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKQGKAGAPG 865
Score = 44 (20.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 11 DKEERGPGDKEERGPGDKKARGP 33
+K E+G K E PG RGP
Sbjct: 732 EKGEQGEDGKAEGPPGPPGDRGP 754
>ZFIN|ZDB-GENE-110728-4 [details] [associations]
symbol:col5a3b "collagen, type V, alpha 3b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-110728-4 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 HOGENOM:HOG000085654 SMART:SM00210
EMBL:GQ485669 IPI:IPI00961572 RefSeq:NP_001177687.1
UniGene:Dr.88476 GeneID:100463515 KEGG:dre:100463515 CTD:100463515
Uniprot:D6MUD7
Length = 1723
Score = 123 (48.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 48/120 (40%), Positives = 59/120 (49%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGP----GDKEERGP----GDREKRG-PGDKEERGPGD 115
G+K E PGDK GP G E+GP G GP GD+ + G PG K +G D
Sbjct: 994 GEKGE--PGDKGLIGPAGQDGEQGPVGLPGAAGPPGPPGEDGDKGETGAPGQKGSKG--D 1049
Query: 116 KEKRGP-GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRGPGDKEERAPGGL 172
K + GP G +GP + + PG E GP G + GQ GD+ RG K R PGGL
Sbjct: 1050 KGESGPPGPVGSQGP-EGQPGAPGVDGEVGPTGQQGMYGQKGDEGARG--FKGSRGPGGL 1106
Score = 115 (45.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 43/115 (37%), Positives = 55/115 (47%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERGP-GDKEERGPGDREKRGPGDKEERGP-GDKEKRGP- 121
GDK E G PG K +G DK E GP G +GP + + PG E GP G + G
Sbjct: 1033 GDKGETGAPGQKGSKG--DKGESGPPGPVGSQGP-EGQPGAPGVDGEVGPTGQQGMYGQK 1089
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP----GDKEERAPGG 171
GD+ RG K RGPG + PG E+G+ G+ GP G + + P G
Sbjct: 1090 GDEGARG--FKGSRGPGGLQGM-PGPPGEKGESGNSGLLGPPGQFGPRGAQGPSG 1141
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 55/178 (30%), Positives = 73/178 (41%)
Query: 17 PGDKEERGP----GDKKARGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDKEERG 72
PG+K ++GP G RGP GD+ +G
Sbjct: 771 PGEKGKKGPPGPAGAAGQRGPNGARGARGARGPTGKSGDKGTSGHDGPPGST-GDRGPQG 829
Query: 73 P----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEKRGP-G 122
P G+ +GP G + G PG +RG PG + K GP G GP G+ + GP G
Sbjct: 830 PQGRVGEMGPKGPNGPAGKDGLPGHPGQRGEPGFQGKTGPPGPTGVVGPQGNTGETGPMG 889
Query: 123 DKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGP----GDKEER-APGGL 172
++ G PG E+G PG + G GD GQG K GP G + R APG +
Sbjct: 890 ERGHPGSPGPAGEQGLPGAAGKEGSKGDPG--GQGTSGKNGPTGLKGFRGSRGAPGAM 945
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 45/110 (40%), Positives = 49/110 (44%)
Query: 72 GPGDKEKRGP-GDKEERGP-GDKEERG-PG-DREKRGPGDKEERG-PGDKEKRGP-GDKE 125
G G GP G ERGP G G PG GPG E+G PGDK GP G
Sbjct: 953 GTGPIGPPGPAGPTGERGPPGLAGAIGQPGRPGTSGGPGPMGEKGEPGDKGLIGPAGQDG 1012
Query: 126 KRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGLV 173
++GP G GP G E GDK E G +K GDK E P G V
Sbjct: 1013 EQGPVGLPGAAGPPGPPGE--DGDKGETG-APGQKGSKGDKGESGPPGPV 1059
Score = 50 (22.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 16 GPGDKEERG-PGDKKARGP 33
GPG E+G PGDK GP
Sbjct: 989 GPGPMGEKGEPGDKGLIGP 1007
Score = 43 (20.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+G+R D PG+K RG KK GP
Sbjct: 504 KGDRGFDGLPGLPGNKGHRGDTGKK--GP 530
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKAR 31
G++ + + PG +RGP + R
Sbjct: 808 GDKGTSGHDGPPGSTGDRGPQGPQGR 833
>UNIPROTKB|J9NV06 [details] [associations]
symbol:COL28A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 Pfam:PF00014 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50279 SMART:SM00131 SMART:SM00327 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 OMA:DPNFEIF EMBL:AAEX03009323
Ensembl:ENSCAFT00000044570 Uniprot:J9NV06
Length = 1143
Score = 129 (50.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 50/120 (41%), Positives = 60/120 (50%)
Query: 70 ERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP-G 122
E+G PGD G PG K ERGP + PGD +K PG + G PG K ++G G
Sbjct: 243 EKGDPGDPGPPGTHGNPGIKGERGP----KGNPGDAQKGEPGKRGPGGIPGYKGEKGENG 298
Query: 123 DKEKRG-PGDKEERGP-GDKEERG-------PGDKEERG-QGDKEKRGP-G-DKEERAPG 170
+ K G GDK GP G K RG PGD +G QG+K + GP G D APG
Sbjct: 299 ECGKPGIKGDKGSLGPHGPKGPRGLQGISGPPGDPGPKGFQGNKGEPGPPGPDGPPGAPG 358
Score = 126 (49.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 50/123 (40%), Positives = 59/123 (47%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PG K ERGP GD +K PG + G PG K E+G G+ K G GDK GP G K
Sbjct: 259 PGIKGERGPKGNPGDAQKGEPGKRGPGGIPGYKGEKGENGECGKPGIKGDKGSLGPHGPK 318
Query: 117 EKRG-------PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEER 167
RG PGD +G G+K E GP + GP GQ G K +RG +
Sbjct: 319 GPRGLQGISGPPGDPGPKGFQGNKGEPGPPGPD--GPPGAPGIGQQGIKGERGQ-EGRTG 375
Query: 168 APG 170
APG
Sbjct: 376 APG 378
Score = 36 (17.7 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 259 PGIKGERGP 267
>UNIPROTKB|F1P2F0 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00131 SMART:SM00327 GO:GO:0005615
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022
IPI:IPI00575769 OMA:GRHANTK EMBL:AADN02034485 EMBL:AADN02034486
Ensembl:ENSGALT00000006250 Uniprot:F1P2F0
Length = 3137
Score = 124 (48.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 51/130 (39%), Positives = 63/130 (48%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + E+G PG + G PG ERG G +G PG+ RGP G + RG GD +
Sbjct: 2244 PGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGRKGEPGNPGPRGPNGQQGPRGEMGDDGR 2303
Query: 119 RG---PGDKEKRG-------PGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRG-PGDKE 165
G PG K ++G PG K GPGD+ G PG K RG+ G+ G PG K
Sbjct: 2304 DGIGGPGPKGRKGERGFVGYPGPKG--GPGDRGGAGGPGPKGNRGRRGNAGNPGTPGQKG 2361
Query: 166 E---RAPGGL 172
E P GL
Sbjct: 2362 EIGYPGPSGL 2371
Score = 47 (21.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G R + K RG PG+K E G
Sbjct: 2090 QGCPGHRGT-KGSRGFPGEKGELG 2112
>UNIPROTKB|P15989 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00131 SMART:SM00327 GO:GO:0004867
SUPFAM:SSF49265 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 KO:K06238 EMBL:M24282 IPI:IPI00575769 PIR:A37797
RefSeq:NP_990865.1 UniGene:Gga.888 ProteinModelPortal:P15989
SMR:P15989 STRING:P15989 PRIDE:P15989 GeneID:396548 KEGG:gga:396548
CTD:1293 eggNOG:NOG237718 HOGENOM:HOG000168250 HOVERGEN:HBG051052
InParanoid:P15989 OrthoDB:EOG4HT8R9 NextBio:20816584 Uniprot:P15989
Length = 3137
Score = 124 (48.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 51/130 (39%), Positives = 63/130 (48%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + E+G PG + G PG ERG G +G PG+ RGP G + RG GD +
Sbjct: 2244 PGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGRKGEPGNPGPRGPNGQQGPRGEMGDDGR 2303
Query: 119 RG---PGDKEKRG-------PGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRG-PGDKE 165
G PG K ++G PG K GPGD+ G PG K RG+ G+ G PG K
Sbjct: 2304 DGIGGPGPKGRKGERGFVGYPGPKG--GPGDRGGAGGPGPKGNRGRRGNAGNPGTPGQKG 2361
Query: 166 E---RAPGGL 172
E P GL
Sbjct: 2362 EIGYPGPSGL 2371
Score = 47 (21.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G R + K RG PG+K E G
Sbjct: 2090 QGCPGHRGT-KGSRGFPGEKGELG 2112
>ZFIN|ZDB-GENE-060526-119 [details] [associations]
symbol:si:ch211-233f10.5 "si:ch211-233f10.5"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-060526-119
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104301 IPI:IPI00507446
EMBL:BX001023 EMBL:CABZ01040285 EMBL:CR931814
Ensembl:ENSDART00000097297 Bgee:F1RB44 Uniprot:F1RB44
Length = 1619
Score = 115 (45.5 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 43/124 (34%), Positives = 59/124 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGP-GDKEERG-PGDKEKRG- 120
G + +GP G GP G+K E+G K E PG GP G++ +RG PGD G
Sbjct: 1069 GYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGL 1128
Query: 121 ---PGDKEKRG----PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAP 169
G++ K G PG+ RG PG K +G G K + +G+ RG PG P
Sbjct: 1129 EGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGP 1188
Query: 170 GGLV 173
G++
Sbjct: 1189 RGVI 1192
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
PG + RGP G K GP PG K ++G PG R P G K + G PG
Sbjct: 408 PGKRGPRGPSGPHGKPGPPGT----PGPKGKKGNPGISPGRAPSGVKGDPGLVGLPGQPG 463
Query: 118 KRGPGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGGL 172
+ PG K ++G PG PGD+ ERGP D +G ++G PG P G+
Sbjct: 464 Q--PGRKGQKGHPGPSGH--PGDQGERGP-DGSPGAKGYPGRQGLPGPIGNMGPKGV 515
Score = 50 (22.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
+G++ PGD+ ERGP G A+G
Sbjct: 468 KGQKGHPGPSGHPGDQGERGPDGSPGAKG 496
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 17 PGDKEERG-------PGDKKARGP 33
PG K ++G PGD+ RGP
Sbjct: 465 PGRKGQKGHPGPSGHPGDQGERGP 488
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD ERGP
Sbjct: 552 PGDFGERGP 560
Score = 33 (16.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/25 (36%), Positives = 9/25 (36%)
Query: 5 RGERASDKEERGPGDKEERGPGDKK 29
RG R PG GP KK
Sbjct: 411 RGPRGPSGPHGKPGPPGTPGPKGKK 435
>UNIPROTKB|P02457 [details] [associations]
symbol:COL1A1 "Collagen alpha-1(I) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 GO:GO:0046872 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 HOVERGEN:HBG004933 EMBL:M17839
EMBL:M17838 EMBL:V00401 EMBL:M10571 EMBL:M17607 IPI:IPI00572548
PIR:A27179 PIR:A90458 PIR:I50629 PIR:S07234 UniGene:Gga.2073
UniGene:Gga.43371 IntAct:P02457 PRIDE:P02457 Uniprot:P02457
Length = 1453
Score = 113 (44.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 48/124 (38%), Positives = 54/124 (43%)
Query: 65 PGDKEERG----PGDKEKRG----PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-PG 114
PG + RG PG+ +G PG GP E PG+R G PG K +RG PG
Sbjct: 680 PGPQGPRGANGAPGNDGAKGDAGAPGAPGNEGPPGLEGM-PGERGAAGLPGAKGDRGDPG 738
Query: 115 DKEKRG-PGDKEKRG---P-GDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEER 167
K G PG RG P G G PGDK E GP G RG PGD+ E
Sbjct: 739 PKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPA----GPTGARGAPGDRGEP 794
Query: 168 APGG 171
P G
Sbjct: 795 GPPG 798
Score = 104 (41.7 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 40/106 (37%), Positives = 48/106 (45%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP----GDK 116
PG+ G PG + PG GP GD+ E GP G G PG GP GD+
Sbjct: 998 PGEAGREGAPG--AEGAPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDR 1055
Query: 117 EKRGPGDKEKRGPGDKEERGPGDKEERGP-GDKEERG-QGDKEKRG 160
+ GP PG RGP + GP GDK E G QGD+ +G
Sbjct: 1056 GETGPAGPAGP-PGPAGARGPAGPQ--GPRGDKGETGEQGDRGMKG 1098
Score = 102 (41.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 45/117 (38%), Positives = 53/117 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
PG GP G+ G PG K G PG G PG R GP PG K G
Sbjct: 365 PGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGP-QGPSGAPGPKGNSG 423
Query: 121 -PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEER-APG 170
PG +G G K E GP G + GP G++ +RG +G+ G PG ER APG
Sbjct: 424 EPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPG 480
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 65 PGDKEERG-PG-DKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG K RG G D K PG +G PG E G PG RG PG++ GP G
Sbjct: 251 PGMKGHRGFSGLDGAKGQPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGA 310
Query: 119 RG-PGDKEKRGP-GDKEERGP-------GDKEERGP-GDKEERG-QGDKEKRGP-GDKEE 166
RG G GP G GP G K E GP G + G QG + + GP G
Sbjct: 311 RGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGSRGEPGPPGPAGA 370
Query: 167 RAPGG 171
P G
Sbjct: 371 AGPAG 375
Score = 97 (39.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 45/117 (38%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG G K+ E G G GP G+R ++GP G +G PG
Sbjct: 581 PGKPGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGAPGFQGLPGPAGP 640
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PG+ GP G + ERG PG ERG QG +GP APG
Sbjct: 641 PGEAGKPGEQGVPGNAGAPGPAGARGERGFPG---ERGVQGPPGPQGPRGANG-APG 693
Score = 97 (39.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 45/121 (37%), Positives = 54/121 (44%)
Query: 65 PGDKEERG-PG-DKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG E+G PG D PG +G G + G PG R +RG PG GP G+ K
Sbjct: 917 PGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP---GPSGEPGK 973
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPG 170
+GP G +RGP G G PG+ G PG E G GP GD+ E P
Sbjct: 974 QGPSGASGERGPPGPMGPPGLAGPPGEAGREGAPG--AEGAPGRDGAAGPKGDRGETGPA 1031
Query: 171 G 171
G
Sbjct: 1032 G 1032
Score = 51 (23.0 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 275 KGEPGSPGENGAPGQMGPRGLPGERGRPGP 304
Score = 49 (22.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG +RGP G + ARG
Sbjct: 216 GKNGDDGEAGKPGRPGQRGPPGPQGARG 243
Score = 41 (19.5 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 17 PGDKEERGP----GDKKARG 32
PGDK E GP G ARG
Sbjct: 767 PGDKGEAGPPGPAGPTGARG 786
Score = 40 (19.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PGD+ E GP G GP
Sbjct: 785 RGAPGDRGEPGPPGPAGFAGP 805
Score = 34 (17.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 16 GP-GDKEERG-PGDKKARGP 33
GP G G PGDK GP
Sbjct: 756 GPIGPPGPAGAPGDKGEAGP 775
>RGD|1309252 [details] [associations]
symbol:Traf3ip1 "TNF receptor-associated factor 3 interacting
protein 1" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR018799
RGD:1309252 GO:GO:0005737 GO:GO:0005856 CTD:26146 eggNOG:NOG304934
HOGENOM:HOG000007159 HOVERGEN:HBG101388 OrthoDB:EOG40S0GB
PANTHER:PTHR31363 EMBL:BC083645 IPI:IPI00777807
RefSeq:NP_001012204.1 UniGene:Rn.82985 ProteinModelPortal:Q5XIN3
SMR:Q5XIN3 STRING:Q5XIN3 PRIDE:Q5XIN3 GeneID:363286 KEGG:rno:363286
UCSC:RGD:1309252 InParanoid:Q5XIN3 NextBio:683130
Genevestigator:Q5XIN3 Uniprot:Q5XIN3
Length = 653
Score = 120 (47.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEE---RGPGDREKRGPG-DKEERGPGDKEKRGPG 122
DKE+ D+++ D++ G++E+ R DR++ D+E D+++R G
Sbjct: 198 DKEKAKEADRDRHREPDRDRNRDGEREKARARAKQDRDRNNKDRDRETERDRDRDRRSDG 257
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
KEK D++ D+E R + E D+EK DK E+
Sbjct: 258 GKEKERQKDRDRDKGKDRERRKSKNGEHTRDPDREKSRDADKSEK 302
Score = 114 (45.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
KE+ P +KE+ DKE+ D++ DR++ G++E+ K+ R +K++
Sbjct: 187 KEDSKPREKER----DKEKAKEADRDRHREPDRDRNRDGEREKARARAKQDRDRNNKDR- 241
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
D+E D++ R G KE+ Q D+++ D+E R
Sbjct: 242 ---DRETERDRDRDRRSDGGKEKERQKDRDRDKGKDRERR 278
Score = 36 (17.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 7 ERASDKEERGPGDKEERGPGDKKAR 31
+ S KEE KEE+ + K R
Sbjct: 150 DNKSVKEEESRTQKEEKRSSEVKER 174
>UNIPROTKB|Q5XIN3 [details] [associations]
symbol:Traf3ip1 "TRAF3-interacting protein 1" species:10116
"Rattus norvegicus" [GO:0008017 "microtubule binding" evidence=IEA]
InterPro:IPR018799 RGD:1309252 GO:GO:0005737 GO:GO:0005856
CTD:26146 eggNOG:NOG304934 HOGENOM:HOG000007159 HOVERGEN:HBG101388
OrthoDB:EOG40S0GB PANTHER:PTHR31363 EMBL:BC083645 IPI:IPI00777807
RefSeq:NP_001012204.1 UniGene:Rn.82985 ProteinModelPortal:Q5XIN3
SMR:Q5XIN3 STRING:Q5XIN3 PRIDE:Q5XIN3 GeneID:363286 KEGG:rno:363286
UCSC:RGD:1309252 InParanoid:Q5XIN3 NextBio:683130
Genevestigator:Q5XIN3 Uniprot:Q5XIN3
Length = 653
Score = 120 (47.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEE---RGPGDREKRGPG-DKEERGPGDKEKRGPG 122
DKE+ D+++ D++ G++E+ R DR++ D+E D+++R G
Sbjct: 198 DKEKAKEADRDRHREPDRDRNRDGEREKARARAKQDRDRNNKDRDRETERDRDRDRRSDG 257
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
KEK D++ D+E R + E D+EK DK E+
Sbjct: 258 GKEKERQKDRDRDKGKDRERRKSKNGEHTRDPDREKSRDADKSEK 302
Score = 114 (45.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
KE+ P +KE+ DKE+ D++ DR++ G++E+ K+ R +K++
Sbjct: 187 KEDSKPREKER----DKEKAKEADRDRHREPDRDRNRDGEREKARARAKQDRDRNNKDR- 241
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
D+E D++ R G KE+ Q D+++ D+E R
Sbjct: 242 ---DRETERDRDRDRRSDGGKEKERQKDRDRDKGKDRERR 278
Score = 36 (17.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 7 ERASDKEERGPGDKEERGPGDKKAR 31
+ S KEE KEE+ + K R
Sbjct: 150 DNKSVKEEESRTQKEEKRSSEVKER 174
>MGI|MGI:2672118 [details] [associations]
symbol:Col27a1 "collagen, type XXVII, alpha 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005583 "fibrillar
collagen" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 MGI:MGI:2672118 GO:GO:0046872 InterPro:IPR008985
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 PROSITE:PS50025 EMBL:AL683828 HSSP:Q15201
GO:GO:0005201 HOGENOM:HOG000085654 KO:K06236 GO:GO:0005583
SMART:SM00210 HOVERGEN:HBG098141 GeneTree:ENSGT00700000104301
CTD:85301 OrthoDB:EOG4FBHSB EMBL:AY167568 EMBL:AL691496
EMBL:AK173283 IPI:IPI00408491 RefSeq:NP_079961.3 UniGene:Mm.194116
ProteinModelPortal:Q5QNQ9 STRING:Q5QNQ9 PhosphoSite:Q5QNQ9
PRIDE:Q5QNQ9 Ensembl:ENSMUST00000036300 GeneID:373864
KEGG:mmu:373864 UCSC:uc008tfs.1 InParanoid:Q5QNQ9 OMA:YSYPDRL
ChiTaRS:COL27A1 NextBio:400955 Bgee:Q5QNQ9 CleanEx:MM_COL27A1
Genevestigator:Q5QNQ9 Uniprot:Q5QNQ9
Length = 1845
Score = 128 (50.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
G+K ++G K + PG +RGP GD+ +RG PGD G G + RG PG + + G
Sbjct: 1312 GEKGDQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGH 1371
Query: 121 PGDKEKRGP-GDKEERGP-GDKEERGPGDKEERG-QGDKEKRGP-GDKEERAPGG 171
PG + + GP G K E GP G + GP + RG QG + GP G + P G
Sbjct: 1372 PGPRGRPGPKGSKGEEGPKGKPGKAGPSGR--RGTQGLQGLPGPRGVVGRQGPEG 1424
Score = 38 (18.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G+R PGD ERGP
Sbjct: 766 GKRGEMGRPGFPGDFGERGP 785
>UNIPROTKB|E1BAI4 [details] [associations]
symbol:CLIC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0005247
"voltage-gated chloride channel activity" evidence=IEA]
InterPro:IPR002946 PRINTS:PR01263 GO:GO:0016020 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 Gene3D:1.20.1050.10
InterPro:IPR010987 SUPFAM:SSF47616 PROSITE:PS50405 GO:GO:0005247
GeneTree:ENSGT00550000074477 InterPro:IPR017933 TIGRFAMs:TIGR00862
CTD:54102 KO:K05026 OMA:DSMDAEG EMBL:DAAA02000010 IPI:IPI00693226
RefSeq:XP_002684631.1 RefSeq:XP_583818.3 ProteinModelPortal:E1BAI4
Ensembl:ENSBTAT00000002299 GeneID:507243 KEGG:bta:507243
NextBio:20867972 Uniprot:E1BAI4
Length = 655
Score = 118 (46.6 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 69 EERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-GDKEERGPGDKEKRG---PGDK 124
E R GD + + + E + E PG+ RGP G EE G + E+ G PGD
Sbjct: 258 ESRDGGDSKSQSQAEAIEAPAPESAECTPGELA-RGPRGSAEETGDPEGEEAGEAAPGDA 316
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRGPGDKEERAPGG 171
+ ++ GP +EE ++ E+G QG E+ G +EE +P G
Sbjct: 317 RAEASEEADQDGPSGQEEEAEEERPEQGLQGPGEEATAGGEEE-SPDG 363
Score = 38 (18.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 12 KEE--RGPGDKEERGPGDKKAR 31
KEE GPG+ PG AR
Sbjct: 151 KEEAGNGPGEPAGSAPGASGAR 172
>UNIPROTKB|F1LNH3 [details] [associations]
symbol:Col6a2 "Protein Col6a2" species:10116 "Rattus
norvegicus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 RGD:1305585 GO:GO:0005615 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GeneTree:ENSGT00530000063022 OMA:RALCNHD IPI:IPI00372839
Ensembl:ENSRNOT00000001695 ArrayExpress:F1LNH3 Uniprot:F1LNH3
Length = 1025
Score = 125 (49.1 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 46/117 (39%), Positives = 60/117 (51%)
Query: 66 GDKEERG-PGDKEKRG-------PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP- 113
G K E+G PG + RG G K +RG PG + +G G+ K+G GD + GP
Sbjct: 445 GPKGEKGDPGPEGPRGLAGEIGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPR 504
Query: 114 GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEER 167
GD + GP GD + G RG PG+K E GP E G+GD +G PG K E+
Sbjct: 505 GDSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPPGPEG-GRGDFGLKGAPGRKGEK 560
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/107 (42%), Positives = 53/107 (49%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG + RG PGD RG D + GP GD G RG PG+K E GP E G
Sbjct: 489 PGKQGSRGDPGDAGPRG--DSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPPGPEG-GR 545
Query: 122 GDKEKRG-PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GD 163
GD +G PG K E+G P D G PG + RG G + + GP GD
Sbjct: 546 GDFGLKGAPGRKGEKGEPADPGPPGEPGPRGPRGIPGPEGEPGPPGD 592
Score = 123 (48.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRG 120
G K +RG PG + +G G+ ++G GD + GP GD + GP GD G RG
Sbjct: 469 GAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRG 528
Query: 121 -PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG+K + GP E G GD +G PG K E+G+ + PG+ R P G+
Sbjct: 529 TPGEKGEPGPPGPEG-GRGDFGLKGAPGRKGEKGE-PADPGPPGEPGPRGPRGI 580
Score = 112 (44.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 45/118 (38%), Positives = 61/118 (51%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDKEERG-PGDKEKR 119
PG++ ++G GD + PG + G PGDK +G G+ G PG K +G PG R
Sbjct: 369 PGEQGDQGAKGDSGR--PGRRGPPGNPGDKGSKGYRGNSGAPGSPGVKGGKGGPGP---R 423
Query: 120 GP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP G+ +RG PG K G G K E+G PG + RG G+ +G GD+ P G
Sbjct: 424 GPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEIGSKGAKGDRGLPGPRG 481
Score = 111 (44.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 42/110 (38%), Positives = 51/110 (46%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRG-PGDKEERG-------PGD 115
GD RGP G + G PG++ ++G R PG R G PGDK +G PG
Sbjct: 352 GDPGSRGPDGYPGEAGSPGEQGDQGAKGDSGR-PGRRGPPGNPGDKGSKGYRGNSGAPGS 410
Query: 116 KE-KRGPGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQ-GDKEKRGP 161
K G G RGP G+ RG PG K GPG +G+ GD GP
Sbjct: 411 PGVKGGKGGPGPRGPKGEPGRRGDPGTKG--GPGSDGPKGEKGDPGPEGP 458
Score = 110 (43.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 74 GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERG-PGDKEKRG-PGDKEKRG 128
GD RGP G E G PG++ ++G GD + PG + G PGDK +G G+ G
Sbjct: 352 GDPGSRGPDGYPGEAGSPGEQGDQGAKGDSGR--PGRRGPPGNPGDKGSKGYRGNSGAPG 409
Query: 129 -PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
PG K +G PG + +G PG + + G +G GP G+K + P G
Sbjct: 410 SPGVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEG 457
Score = 35 (17.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKAR 31
+GE SD + PG + G +K +
Sbjct: 315 KGEFGSDGRKGAPGLAGKNGTDGQKGK 341
>UNIPROTKB|F1P6C9 [details] [associations]
symbol:COL5A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 KO:K06236 SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:50509 OMA:KGDVGQD
EMBL:AAEX03012427 EMBL:AAEX03012428 RefSeq:XP_542078.3
Ensembl:ENSCAFT00000028514 GeneID:484961 KEGG:cfa:484961
Uniprot:F1P6C9
Length = 1749
Score = 113 (44.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 49/119 (41%), Positives = 59/119 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG----PGDREKRG-PGDKEERG-PGDKE 117
PG + E GP G K + G EE PG E+G PG G PG K G PG
Sbjct: 756 PGPRGEDGPEGLKGQEGLAG-EEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPL- 813
Query: 118 KRGP-GDKEKRG----PGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG----PGDK 164
GP G+K KRG PG + ERGP G + ERG PG + G +GD + G PG+K
Sbjct: 814 --GPLGEKGKRGKAGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAAGIPGEK 870
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 48/123 (39%), Positives = 60/123 (48%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGPGDREKRGPGDKEERG----PGDKE 117
PG K + GP GD+ GP G + E GP G K + G E+ PG E+G PG
Sbjct: 738 PGFKGDGGPKGDRGHPGPPGPRGEDGPEGLKGQEGLAG-EEGPPGSAGEKGKLGVPGLPG 796
Query: 118 KRG-PGDKEKRG-PGDKEERGP-GDKEERG----PGDKEERGQ-GDKEKRG-PGDKEERA 168
G PG K G PG GP G+K +RG PG + ERG G + +RG PG +
Sbjct: 797 YPGRPGPKGSTGFPGPL---GPLGEKGKRGKAGQPGLEGERGPPGSRGERGQPGATGQPG 853
Query: 169 PGG 171
P G
Sbjct: 854 PKG 856
Score = 107 (42.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 45/118 (38%), Positives = 57/118 (48%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRG-PGDKEERGPGDKEKR 119
PG + ERG PG + GP GD + G G E+G PG + G PG K GP K+ R
Sbjct: 837 PGSRGERGQPGATGQPGPKGDVGQDGAAGIPGEKGLPGLQGPPGFPGPKGPPGPQGKDGR 896
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGGL 172
PG +RG G + + GP G GP G E G G++ GP G E+ GL
Sbjct: 897 -PGHPGQRGELGFQGQTGPPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGL 953
Score = 105 (42.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 45/119 (37%), Positives = 54/119 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERGP----GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PG + PGD G GDK GP G ERGP G G PG +GP G
Sbjct: 981 PGP--QGAPGDPGPIGLKGDKGPLGPVGANGSPGERGPVGPAGGIGLPGQSGGQGPVGPA 1038
Query: 117 -EKRGPGDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
EK PG++ GP K+ PG RGP G G+ GDK + G PG+K + G
Sbjct: 1039 GEKGSPGERGPPGPTGKDGI-PGPLGLRGPPGAVGPSGEDGDKGEVGAPGNKGSKGDKG 1096
Score = 52 (23.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE+ E+ PG K + GP GD+ GP
Sbjct: 726 QGEKGEQGEDGFPGFKGDGGPKGDRGHPGP 755
Score = 43 (20.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ + PG + ERGP G + RG
Sbjct: 817 GEKGKRGKAGQPGLEGERGPPGSRGERG 844
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G+R D PG+K +RG G GP
Sbjct: 549 KGDRGFDGLPGLPGEKGQRGDFGHVGQPGP 578
Score = 34 (17.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 2 QACRGERASDKEERGPGDKEERG 24
+ +G+ EE PG E+G
Sbjct: 765 EGLKGQEGLAGEEGPPGSAGEKG 787
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 124 (48.7 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KE + DKEK + +ER +KEE D+E + DKE+ DK+K+ DKEK
Sbjct: 1081 EKELKEKDDKEKEKEKELKEREDKEKEE----DKEAKDKVDKEKEE--DKQKQ---DKEK 1131
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE 165
+K+E+ DKEE +KEE + DKEK G DKE
Sbjct: 1132 EEDKEKQEK---DKEEDKDKEKEENKE-DKEKEGT-DKE 1165
Score = 124 (48.7 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 42/101 (41%), Positives = 54/101 (53%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKR-GPGDKE 125
DKE + DKEK K+++ +KEE D+EK+ DKEE DKEK DKE
Sbjct: 1109 DKEAKDKVDKEKEEDKQKQDK---EKEE----DKEKQEK-DKEE--DKDKEKEENKEDKE 1158
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
K G DKE + DKE + +KEE+ DKE G DK +
Sbjct: 1159 KEGT-DKEGKDKEDKEIKEDKEKEEK---DKEAIGDHDKSD 1195
Score = 121 (47.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPG-DKEKRGPGDKE 125
DKE+ + ++R +KEE DKE + D+EK K+++ DKEK+ +K+
Sbjct: 1089 DKEKEKEKELKEREDKEKEE----DKEAKDKVDKEKEEDKQKQDKEKEEDKEKQ---EKD 1141
Query: 126 KRGPGDKE-ERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
K DKE E DKE+ G DKE + + DKE + +KEE+
Sbjct: 1142 KEEDKDKEKEENKEDKEKEGT-DKEGKDKEDKEIKEDKEKEEK 1183
Score = 107 (42.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+++ DKEK + +E+ +KE + D+EK + +ER DKEK DKE
Sbjct: 1061 EKDDKEKEDKEK----ELKEKESKEKELKEKDDKEKEKEKELKERE--DKEKEE--DKEA 1112
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+ DKE+ K+++ + +E+ + DKE+ +KEE
Sbjct: 1113 KDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKEE 1152
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 29/101 (28%), Positives = 64/101 (63%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KEE+ ++E++ ++EE+ +KEE+ ++E++ ++EE+ +KE++ + EK
Sbjct: 449 EKEEKERLEREEKERLEREEKQ--EKEEKERLEKEEKERLEREEKQ--EKEEKEEKE-EK 503
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+KEE+ +KEE+ +K+E+ + DKEK+ +++E+
Sbjct: 504 EENEEKEEKEEKEKEEKEEKEKQEK-EDDKEKQENENEQEK 543
Score = 40 (19.1 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
E +KEE+ +KEE+ +K+
Sbjct: 507 EEKEEKEEKEKEEKEEKEKQEKE 529
Score = 40 (19.1 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 7 ERASDKEERGPGDKEERGPGDKKAR 31
E +KEE+ +KEE+ +K+ +
Sbjct: 504 EENEEKEEKEEKEKEEKEEKEKQEK 528
Score = 35 (17.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 5 RGERASDKEERGPGDKEERGPGDKK 29
R ER +E+ +KEE+ ++K
Sbjct: 485 RLEREEKQEKEEKEEKEEKEENEEK 509
Score = 34 (17.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 7 ERASDKEERGPGDKEER 23
E +KEE+ +KEE+
Sbjct: 467 EEKQEKEEKERLEKEEK 483
>ZFIN|ZDB-GENE-070103-4 [details] [associations]
symbol:nefmb "neurofilament, medium polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-070103-4 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
OrthoDB:EOG4VMFFD KO:K04573 EMBL:BX005158 IPI:IPI00482469
RefSeq:NP_001116752.1 UniGene:Dr.90305 ProteinModelPortal:B0S553
SMR:B0S553 GeneID:100033387 KEGG:dre:100033387 CTD:100033387
OMA:ESICTED NextBio:20787839 Bgee:B0S553 Uniprot:B0S553
Length = 717
Score = 115 (45.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 67 DKEERGPGDKEKRGPGDKEE---RGPGDKEERGPGDREKR----GPGDKEERGPGDKEKR 119
++E+ G G+ EK +KE+ G G+K+E G+ EK+ G +K+E G++EK+
Sbjct: 527 EEEDEGKGE-EKEDEDEKEDTKSEGEGEKKEESGGEEEKKEESGGEEEKKEESGGEEEKK 585
Query: 120 GPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQG--DKEKRGPGDKEE 166
+E G +K+E G+ E + +K+++ + EK+ P +E+
Sbjct: 586 ----EESGGEEEKKEESAGE-EAKADSEKDDKKSDTEEDEKKSPVSEEK 629
Score = 112 (44.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKR----GPGDKEERGPGDKEKRGP 121
G+K+E G++EK+ +E G +K+E G+ EK+ G +K+E G++ K
Sbjct: 552 GEKKEESGGEEEKK----EESGGEEEKKEESGGEEEKKEESGGEEEKKEESAGEEAKADS 607
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRG---PGDKEERAP 169
+K+ +++E+ EE+ EE+ Q +K+ +KEE +P
Sbjct: 608 EKDDKKSDTEEDEKKSPVSEEKAESPAEEKKQDEKQVDKVVVANNKEEASP 658
Score = 108 (43.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 70 ERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGP 129
E+ P EK G +EE G EE+ D EK D + G G+K++ G++EK+
Sbjct: 513 EKSP-TSEKEGSEKEEEEDEGKGEEKEDED-EKE---DTKSEGEGEKKEESGGEEEKKEE 567
Query: 130 -GDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEE 166
G +EE+ KEE G +K+E G++EK+ EE
Sbjct: 568 SGGEEEK----KEESGGEEEKKEESGGEEEKKEESAGEE 602
Score = 103 (41.3 bits), Expect = 0.00031, P = 0.00031
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDK----EKRGPG 122
++EE G ++E+ G+ +++E G + E + +E G+K EK G
Sbjct: 465 EEEEEGGDEEEEAEEGEAAAEEEEEEDEEGEEEEEPQVEVIEETELCGEKSPTSEKEGSE 524
Query: 123 DKEKRGPGDKEERGPGDKEE----RGPGDKEERGQGDKEKR--GPGDKEERAPGG 171
+E+ G EE+ D++E G G+K+E G++EK+ G++E++ G
Sbjct: 525 KEEEEDEGKGEEKEDEDEKEDTKSEGEGEKKEESGGEEEKKEESGGEEEKKEESG 579
Score = 102 (41.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/107 (24%), Positives = 56/107 (52%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKE--ERGPGDREKR----GPGDKEERGPGDKEKR- 119
D++E+ D + G G+K+E G++E E G+ EK+ G +K+E G++EK+
Sbjct: 539 DEDEKE--DTKSEGEGEKKEESGGEEEKKEESGGEEEKKEESGGEEEKKEESGGEEEKKE 596
Query: 120 -GPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKE 165
G++ K +++ +++E+ EE+ + E++ +K+
Sbjct: 597 ESAGEEAKADSEKDDKKSDTEEDEKKSPVSEEKAESPAEEKKQDEKQ 643
Score = 100 (40.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPG--DREKRGPGDKEE-RGPGDKEKRGPGDK 124
KEE G +++K +E + +K+++ + EK+ P +E+ P +++K+
Sbjct: 585 KEESGGEEEKKEESAGEEAKADSEKDDKKSDTEEDEKKSPVSEEKAESPAEEKKQDEKQV 644
Query: 125 EKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+K +KEE P KEE E GDKE + +KEE+ P
Sbjct: 645 DKVVVANNKEEASP--KEEVQTRTVETITNGDKETKAEPEKEEKKP 688
Score = 44 (20.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 5 RGERASDKEERGPGDKEERGPGDKK 29
+GE D++E+ D + G G+KK
Sbjct: 533 KGEEKEDEDEKE--DTKSEGEGEKK 555
Score = 41 (19.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 2 QACRGERA--SDKEERGPGDKEERGPGDKK 29
+ C GE++ S+KE ++E+ G G++K
Sbjct: 509 ELC-GEKSPTSEKEGSEKEEEEDEGKGEEK 537
Score = 34 (17.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 7 ERASDKEERGPGDKEERGPGDKK 29
E + +EE G EE+ D+K
Sbjct: 521 EGSEKEEEEDEGKGEEKEDEDEK 543
>RGD|1308704 [details] [associations]
symbol:Col6a3 "collagen, type VI, alpha 3" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0009749
"response to glucose stimulus" evidence=IEP] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0042383 "sarcolemma"
evidence=ISO] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 RGD:1308704 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867 GO:GO:0009749
SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022
OrthoDB:EOG4HT8R9 IPI:IPI00565677 PRIDE:D4A115
Ensembl:ENSRNOT00000026707 UCSC:RGD:1308704 ArrayExpress:D4A115
Uniprot:D4A115
Length = 2665
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/112 (40%), Positives = 57/112 (50%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGP-GDKEERGP-GDK 116
PG E+G PG + +GP GDK ERG GD + G D ++RGP G+ + GP G
Sbjct: 1513 PGSSGEKGSPGRRGDKGPKGDKGERGDVGIRGDPGDSGR-DSQQRGPKGETGDIGPMGLP 1571
Query: 117 EKRG----PGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP 161
+ G PGD K G + RGP G K RG PG G QG + +GP
Sbjct: 1572 GRDGIPGSPGDPGKDGGFGR--RGPAGAKGNRGGPGQPGFEGEQGTRGSQGP 1621
Score = 115 (45.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 46/119 (38%), Positives = 63/119 (52%)
Query: 65 PGDKEERGP-GDKEKRG-PGD---KEERG-PGDKEERGPGDREKRGPGDKEERG-PGDK- 116
PG++ G G + +G PG K RG PG+K E G + G++ ++G PG
Sbjct: 1459 PGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELGEIGLDGLD-GEEGDKGLPGSSG 1517
Query: 117 EKRGPGDKEKRGP-GDKEERGPGDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGGL 172
EK PG + +GP GDK ERG D RG PGD G+ D ++RGP G+ + P GL
Sbjct: 1518 EKGSPGRRGDKGPKGDKGERG--DVGIRGDPGDS---GR-DSQQRGPKGETGDIGPMGL 1570
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/95 (40%), Positives = 49/95 (51%)
Query: 73 PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGP-GDKEERGPGDKEKRGPGDKEKRG- 128
PG++ + GP G K E G PG K G G+R RG GD G G + +RG K +RG
Sbjct: 1649 PGERGRTGPLGRKGEPGEPGPKG--GTGNRGPRGETGDDGRDGVGSEGRRGK--KGERGF 1704
Query: 129 PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGP 161
PG +G PG+ GP G K RG+ + GP
Sbjct: 1705 PGYPGPKGTPGEPGADGPPGPKGIRGR--RGNSGP 1737
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
+G S E+ PG + ++GP GDK RG
Sbjct: 1510 KGLPGSSGEKGSPGRRGDKGPKGDKGERG 1538
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G+R K RG PG+K E G
Sbjct: 1474 QGCPGQRGV-KGSRGFPGEKGELG 1496
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 6 GERASDKEERGP-GDKEERGP 25
G+ D ++RGP G+ + GP
Sbjct: 1547 GDSGRDSQQRGPKGETGDIGP 1567
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R +E GPG ERGP
Sbjct: 1448 GYRGYPGDEGGPG---ERGP 1464
>MGI|MGI:88460 [details] [associations]
symbol:Col6a2 "collagen, type VI, alpha 2" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=ISO]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0042383 "sarcolemma" evidence=IDA]
[GO:0043234 "protein complex" evidence=ISO] [GO:0070208 "protein
heterotrimerization" evidence=ISO] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 MGI:MGI:88460 GO:GO:0005576
GO:GO:0005615 GO:GO:0043234 GO:GO:0009749 GO:GO:0007155
GO:GO:0042383 GO:GO:0005581 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 eggNOG:NOG256042 HOGENOM:HOG000111863
KO:K06238 GeneTree:ENSGT00530000063022 CTD:1292 HOVERGEN:HBG051051
OrthoDB:EOG45TCMN ChiTaRS:COL6A2 EMBL:X65582 EMBL:BC034414
EMBL:AK042826 EMBL:X62332 EMBL:L06343 EMBL:Z18272 IPI:IPI00621027
PIR:S21369 PIR:S32604 RefSeq:NP_666119.1 UniGene:Mm.1949
ProteinModelPortal:Q02788 SMR:Q02788 STRING:Q02788
PhosphoSite:Q02788 REPRODUCTION-2DPAGE:Q02788 PaxDb:Q02788
PRIDE:Q02788 Ensembl:ENSMUST00000001181 GeneID:12834 KEGG:mmu:12834
UCSC:uc007fuu.2 InParanoid:Q02788 NextBio:282346 Bgee:Q02788
CleanEx:MM_COL6A2 Genevestigator:Q02788
GermOnline:ENSMUSG00000020241 Uniprot:Q02788
Length = 1034
Score = 124 (48.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 50/124 (40%), Positives = 63/124 (50%)
Query: 66 GDKEERG-PGDKEKRG-------PGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP- 113
G K E+G PG + RG G K +RG PG + +G G+ K+G GD + GP
Sbjct: 454 GPKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPR 513
Query: 114 GDKEKRGP-GDKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PG---DKEER 167
GD + GP GD + G RG PG+K E GP E G+GD +G PG DK E
Sbjct: 514 GDSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPPGPEG-GRGDFGLKGTPGRKGDKGEP 572
Query: 168 A-PG 170
A PG
Sbjct: 573 ADPG 576
Score = 121 (47.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 44/107 (41%), Positives = 53/107 (49%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGP-GDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG + RG PGD RG D + GP GD G RG PG+K E GP E G
Sbjct: 498 PGKQGSRGDPGDAGPRG--DSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPPGPEG-GR 554
Query: 122 GDKEKRG-PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GD 163
GD +G PG K ++G P D G PG + RG G + + GP GD
Sbjct: 555 GDFGLKGTPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGPPGD 601
Score = 116 (45.9 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 45/118 (38%), Positives = 61/118 (51%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERG-PGDKEERG-PGDREKRG-PGDKEERG-PGDKEKR 119
PG++ ++G GD + PG + G PGDK +G G+ G PG K +G PG R
Sbjct: 378 PGERGDQGAKGDSGR--PGRRGPPGDPGDKGSKGYQGNNGAPGSPGVKGGKGGPGP---R 432
Query: 120 GP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP G+ +RG PG K G G K E+G PG + RG G+ +G GD+ P G
Sbjct: 433 GPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGPRG 490
Score = 112 (44.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 74 GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERG-PGDKEKRG-PGDKEKRG 128
GD RGP G E G PG++ ++G GD + PG + G PGDK +G G+ G
Sbjct: 361 GDPGSRGPDGYPGEAGSPGERGDQGAKGDSGR--PGRRGPPGDPGDKGSKGYQGNNGAPG 418
Query: 129 -PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
PG K +G PG + +G PG + + G +G GP G+K + P G
Sbjct: 419 SPGVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEG 466
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 44/124 (35%), Positives = 58/124 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGP--GDREKRGPGDKEERGP-GDKEK 118
PG+ ++G GD GP G +G PG K E+G D K PG + G G K K
Sbjct: 291 PGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGK 350
Query: 119 RG----PGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG----PGDKEER 167
G PG K GD RGP G E G PG++ ++G +GD + G PGD ++
Sbjct: 351 LGRIGPPGCK-----GDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDK 405
Query: 168 APGG 171
G
Sbjct: 406 GSKG 409
Score = 35 (17.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKAR 31
+GE SD + PG + G +K +
Sbjct: 324 KGEFGSDGRKGAPGLAGKNGTDGQKGK 350
>UNIPROTKB|F1RPL0 [details] [associations]
symbol:NAP1L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR002164 Pfam:PF00956
GO:GO:0005634 GO:GO:0006334 PANTHER:PTHR11875
GeneTree:ENSGT00480000042668 KO:K11280 OMA:WMAAIEE EMBL:FP236342
RefSeq:XP_003135234.1 Ensembl:ENSSSCT00000013575 GeneID:100525798
KEGG:ssc:100525798 Uniprot:F1RPL0
Length = 473
Score = 116 (45.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 82 GDKEE-RGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDK 140
GDK GPG++ ERG + GPGD EERG ++ GPG E+ G G+ G G+
Sbjct: 19 GDKVMMEGPGEQPERG--EDAAAGPGDDEERG--EEAAAGPG--EEGGKGEDAAAGSGEG 72
Query: 141 EERGPGDKEERGQGDKEK 158
E+G D +E D+ K
Sbjct: 73 GEKGE-DTDEDSDADRPK 89
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 83 DKEERGPGDKEE-RGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDKE 141
+ + GDK GPG++ +RG + GPGD E+RG ++ GPG EE G G+
Sbjct: 12 ESSQEEAGDKVMMEGPGEQPERG--EDAAAGPGDDEERG--EEAAAGPG--EEGGKGEDA 65
Query: 142 ERGPGDKEERGQGDKEKRGPGDKEERAPGGLV 173
G G+ E+G+ E D + P GL+
Sbjct: 66 AAGSGEGGEKGEDTDE-----DSDADRPKGLI 92
Score = 107 (42.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 66 GDKEE-RGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
GDK GPG++ +RG + GPGD EERG + GPG EE G G+ G G+
Sbjct: 19 GDKVMMEGPGEQPERG--EDAAAGPGDDEERG--EEAAAGPG--EEGGKGEDAAAGSGEG 72
Query: 125 EKRGPGDKEERGPGDK 140
++G D +E D+
Sbjct: 73 GEKGE-DTDEDSDADR 87
Score = 95 (38.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP----GDKEERGPGDREKRGPGDKEERGPGDKEKRG 120
PG++ ERG + GPGD EERG G EE G G+ G G+ E+G D ++
Sbjct: 27 PGEQPERG--EDAAAGPGDDEERGEEAAAGPGEEGGKGEDAAAGSGEGGEKGE-DTDEDS 83
Query: 121 PGDKEK 126
D+ K
Sbjct: 84 DADRPK 89
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 131 DKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGL 172
DK++ D ++ D ++ GD + G+ +E P G+
Sbjct: 216 DKDDDDADDDDD----DDDDDDDGDDSEAARGENKEEDPKGI 253
>UNIPROTKB|F1NF73 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 OMA:WVRVSHE
GeneTree:ENSGT00640000091447 EMBL:AADN02016911 IPI:IPI00821000
Ensembl:ENSGALT00000019793 Uniprot:F1NF73
Length = 517
Score = 108 (43.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/113 (38%), Positives = 51/113 (45%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEK-RG 120
PG K E G GD RGP G +G PG G R PG K E G K+K +G
Sbjct: 244 PGKKGEMGQKGDPGIRGPMGPPGHQGVPGQPGYNGNAGEPGR-PGQKGEAG---KQKLQG 299
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERA-PG 170
P E+ PG PG K E+G D RG G GP G+K +R PG
Sbjct: 300 PAG-ERGPPGPPGPSSPGQKGEKG--DLGPRGFPGVTGSLGPKGEKGDRGVPG 349
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G A E PG K ERGP
Sbjct: 158 GSSAPPAEPGRPGHKGERGP 177
>UNIPROTKB|F1LRM7 [details] [associations]
symbol:Col2a1 "Collagen alpha-1(II) chain" species:10116
"Rattus norvegicus" [GO:0001502 "cartilage condensation"
evidence=IEA] [GO:0001894 "tissue homeostasis" evidence=IEA]
[GO:0001958 "endochondral ossification" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005585 "collagen type
II" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006029 "proteoglycan metabolic
process" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030903 "notochord development" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0048407
"platelet-derived growth factor binding" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060174 "limb bud formation"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0071599 "otic
vesicle development" evidence=IEA] [GO:0071773 "cellular response
to BMP stimulus" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:2375
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201
GeneTree:ENSGT00660000095287 IPI:IPI00394380
Ensembl:ENSRNOT00000016044 ArrayExpress:F1LRM7 Uniprot:F1LRM7
Length = 1419
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/109 (43%), Positives = 52/109 (47%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGPGDKEKR 119
PG GP G G PGD E G PG ERG PG + RG PG PG K R
Sbjct: 165 PGVSGPMGPRGPPGPAGKPGDDGEAGKPGKAGERGLPGPQGARGFPGTPGL--PGVKGHR 222
Query: 120 G-PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
G PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 223 GYPGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 269
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 45/116 (38%), Positives = 51/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 229 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 286
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG+ P G
Sbjct: 287 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGSRGEPGNPGSPGPAG 337
Score = 102 (41.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGDK 116
PG K E GP RGP G + RG PG+ GP G+ G PG K G PG
Sbjct: 303 PGAKGEAGPTGA--RGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 360
Query: 117 EKRGPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
PG RGP G + GP G K + G PG +G QG K + GP + APG
Sbjct: 361 G--APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG-APG 415
Score = 98 (39.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/118 (38%), Positives = 53/118 (44%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG- 120
G RGP G GP G + G PG+ GP G R GP K PGD + G
Sbjct: 136 GPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPAGK----PGDDGEAGK 191
Query: 121 PGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG----QGDKEKRG-PGDK-EERAPG 170
PG +RG PG + RG PG PG K RG G K + G PG K E +PG
Sbjct: 192 PGKAGERGLPGPQGARGFPGTPGL--PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 247
Score = 97 (39.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 44/119 (36%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG GP K+ GP G + + G PG + PG + G PG+K E PGD GP
Sbjct: 846 PGPAGPPGPAGKD--GPKGARGDTGAPGRAGD--PGLQGPAGAPGEKGE--PGDD---GP 896
Query: 122 -GDKEKRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
G GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 897 SGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 954
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK ERG PG + G PG GP
Sbjct: 62 QGPRGDRG-DKGERGAPGPRGRDGEPGTPGNPGP 94
Score = 52 (23.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 240 KGESGSPGENGSPGPMGPRGLPGERGRTGP 269
Score = 51 (23.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARG 32
G+ D E PG ERG PG + ARG
Sbjct: 181 GKPGDDGEAGKPGKAGERGLPGPQGARG 208
Score = 34 (17.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 78 GPRGRDGEPGTPGNPGPPGP 97
>UNIPROTKB|E1BZN7 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 GeneTree:ENSGT00640000091447
EMBL:AADN02016911 IPI:IPI00821826 Ensembl:ENSGALT00000037895
Uniprot:E1BZN7
Length = 483
Score = 108 (43.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/113 (38%), Positives = 51/113 (45%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGPGDKEK-RG 120
PG K E G GD RGP G +G PG G R PG K E G K+K +G
Sbjct: 210 PGKKGEMGQKGDPGIRGPMGPPGHQGVPGQPGYNGNAGEPGR-PGQKGEAG---KQKLQG 265
Query: 121 PGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRGP-GDKEERA-PG 170
P E+ PG PG K E+G D RG G GP G+K +R PG
Sbjct: 266 PAG-ERGPPGPPGPSSPGQKGEKG--DLGPRGFPGVTGSLGPKGEKGDRGVPG 315
Score = 43 (20.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG K ERGP G +GP
Sbjct: 137 PGHKGERGPPGISGLQGP 154
>UNIPROTKB|F1LN37 [details] [associations]
symbol:Col2a1 "Collagen alpha-1(II) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 RGD:2375 GO:GO:0005737 GO:GO:0043066
GO:GO:0005615 GO:GO:0003007 GO:GO:0007601 GO:GO:0030199
GO:GO:0007417 GO:GO:0042472 GO:GO:0001894 GO:GO:0007605
GO:GO:0071773 InterPro:IPR008160 Pfam:PF01391 GO:GO:0071599
GO:GO:0005604 GO:GO:0001502 GO:GO:0060021 GO:GO:0002062
GO:GO:0010468 GO:GO:0060272 GO:GO:0006029 GO:GO:0001958
GO:GO:0060351 GO:GO:0005201 GO:GO:0005585 GO:GO:0060174
GO:GO:0030903 IPI:IPI00388575 Ensembl:ENSRNOT00000037840
ArrayExpress:F1LN37 Uniprot:F1LN37
Length = 1487
Score = 110 (43.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/109 (43%), Positives = 52/109 (47%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGPGDKEKR 119
PG GP G G PGD E G PG ERG PG + RG PG PG K R
Sbjct: 233 PGVSGPMGPRGPPGPAGKPGDDGEAGKPGKAGERGLPGPQGARGFPGTPGL--PGVKGHR 290
Query: 120 G-PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
G PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 291 GYPGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 337
Score = 103 (41.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 45/116 (38%), Positives = 51/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 297 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 354
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG+ P G
Sbjct: 355 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGSRGEPGNPGSPGPAG 405
Score = 102 (41.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGDK 116
PG K E GP RGP G + RG PG+ GP G+ G PG K G PG
Sbjct: 371 PGAKGEAGPTGA--RGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 428
Query: 117 EKRGPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
PG RGP G + GP G K + G PG +G QG K + GP + APG
Sbjct: 429 G--APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG-APG 483
Score = 98 (39.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 46/118 (38%), Positives = 53/118 (44%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG- 120
G RGP G GP G + G PG+ GP G R GP K PGD + G
Sbjct: 204 GPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPAGK----PGDDGEAGK 259
Query: 121 PGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG----QGDKEKRG-PGDK-EERAPG 170
PG +RG PG + RG PG PG K RG G K + G PG K E +PG
Sbjct: 260 PGKAGERGLPGPQGARGFPGTPGL--PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 315
Score = 97 (39.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 44/119 (36%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG GP K+ GP G + + G PG + PG + G PG+K E PGD GP
Sbjct: 914 PGPAGPPGPAGKD--GPKGARGDTGAPGRAGD--PGLQGPAGAPGEKGE--PGDD---GP 964
Query: 122 -GDKEKRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
G GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 965 SGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 1022
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK ERG PG + G PG GP
Sbjct: 130 QGPRGDRG-DKGERGAPGPRGRDGEPGTPGNPGP 162
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 308 KGESGSPGENGSPGPMGPRGLPGERGRTGP 337
Score = 51 (23.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARG 32
G+ D E PG ERG PG + ARG
Sbjct: 249 GKPGDDGEAGKPGKAGERGLPGPQGARG 276
Score = 34 (17.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 146 GPRGRDGEPGTPGNPGPPGP 165
>WB|WBGene00016461 [details] [associations]
symbol:C35E7.9 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000535 Pfam:PF00635 PROSITE:PS50202 GO:GO:0005856
GO:GO:0005198 Gene3D:2.60.40.360 InterPro:IPR008962 SUPFAM:SSF49354
GeneTree:ENSGT00690000102102 EMBL:FO080791 PIR:T33068
RefSeq:NP_492824.1 ProteinModelPortal:O61765 SMR:O61765
STRING:O61765 EnsemblMetazoa:C35E7.9 GeneID:172987
KEGG:cel:CELE_C35E7.9 UCSC:C35E7.9 CTD:172987 WormBase:C35E7.9
eggNOG:NOG239641 InParanoid:O61765 OMA:RSIWITE NextBio:877809
Uniprot:O61765
Length = 301
Score = 111 (44.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K+E+ KE + K+++ KEE+ ++EK GD ++ D +K G D EK+
Sbjct: 99 KDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEK---GDDKKEDEKDDKKSGSKDAEKK 155
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGP 161
+EE+ KEE+ KE+ + D++K P
Sbjct: 156 EEKKEEEKKEEKKEEKKEEKKEDEKKEDEKKEEP 189
Score = 104 (41.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEE-RGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
KEE ++EK+ K E+ KEE + D++ +K+E DK+ +K++
Sbjct: 65 KEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKE 124
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
D++E+G DK+E DK+ G D EK+ +EE+
Sbjct: 125 EKKEDEKEKGD-DKKEDEKDDKKS-GSKDAEKKEEKKEEEK 163
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 68 KEERGPGDKE--KRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
K E+ KE K+ K+E+ KE++ ++ + KEE+ +KEK GD +
Sbjct: 81 KSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEK---GDDK 137
Query: 126 KRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
K D ++ G D E++ +EE+ + KE++ KE+
Sbjct: 138 KEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKED 178
Score = 33 (16.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 7 ERASDKEERGPGDKEERGPGDKKA 30
++ K+E P +EE+ KK+
Sbjct: 59 KKEEPKKEEEPKKEEEKKEKSKKS 82
>UNIPROTKB|F1P4L0 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001502 "cartilage condensation"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0006029 "proteoglycan
metabolic process" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050910 "detection of mechanical stimulus involved in sensory
perception of sound" evidence=IEA] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0030199 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006029 GO:GO:0005201 GeneTree:ENSGT00700000104155
EMBL:AADN02012919 EMBL:AADN02012920 IPI:IPI00812264
Ensembl:ENSGALT00000008320 ArrayExpress:F1P4L0 Uniprot:F1P4L0
Length = 888
Score = 111 (44.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 47/117 (40%), Positives = 55/117 (47%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEK 118
G+K E GP G +GP GD +G PG PGD G PG + G G EK
Sbjct: 361 GEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGF--PGDPGPPGEPGPAGQDGVGG-EK 417
Query: 119 RGPGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPG 170
GD + GP G E GP G +RGP G G QG+K +G PG E APG
Sbjct: 418 GEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPG--AEGAPG 472
Score = 104 (41.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 42/113 (37%), Positives = 53/113 (46%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRG- 120
G+K E PG+ GP G+ GP G++ E+G G GP G K PGD +G
Sbjct: 334 GEKGE--PGEAGNPGPPGESGTSGPKGERGEKGEAGPPGAAGPPGAKGP--PGDDGPKGN 389
Query: 121 PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGG 171
PG G PG E GP ++ G G+K E GD + GP G E P G
Sbjct: 390 PGPVGFPGDPGPPGEPGPAGQDGVG-GEKGE--DGDPGQPGPPGPSGEAGPPG 439
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 43/118 (36%), Positives = 53/118 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEE-RGP-GDREKRGP-GDKEERGPGDKEKRG- 120
PG + GP EK PG+K +GP ++ +GP G GP G E GDK + G
Sbjct: 159 PGPQGPPGPAG-EKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSPGE--DGDKGEIGE 215
Query: 121 PGDKEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEK--RGP----GDKEERAPGG 171
PG K +G DK E GP G +GP GD E RG G K + P G
Sbjct: 216 PGQKGSKG--DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRG 271
Score = 100 (40.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 43/117 (36%), Positives = 51/117 (43%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGPGDKEKR 119
PG E GP G KRGP G G G+K +G PG G G +GP K
Sbjct: 429 PGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPGAEGAPGKTGPVGPQGPAGK--- 485
Query: 120 GPGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
PG + RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 486 -PGPEGLRGIPGPVGEQGLPGAPGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 540
Score = 46 (21.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E GP G +GP
Sbjct: 210 KGEIGEPGQKGSKGDKGENGPPGPPGLQGP 239
Score = 41 (19.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PG+K +GP G +GP
Sbjct: 170 EKGAPGEKGPQGPAGRDGVQGP 191
Score = 39 (18.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E G G K RG
Sbjct: 334 GEKGEPGEAGNPGPPGESGTSGPKGERG 361
>UNIPROTKB|J9P8F7 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 GeneTree:ENSGT00700000104155 EMBL:AAEX03006798
EMBL:AAEX03006799 EMBL:AAEX03006800 Ensembl:ENSCAFT00000044143
Uniprot:J9P8F7
Length = 1405
Score = 114 (45.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 356 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 415
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 416 GGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 475
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 476 RGQRGPTG 483
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 626 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 683
Query: 117 -EKRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
EK PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 684 GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 743
Query: 168 APGG 171
P G
Sbjct: 744 GPPG 747
Score = 112 (44.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 473 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 532
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 533 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 588
Score = 105 (42.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERGPGDKEKRGP----GDKEERGP-GDKEERG-PGDREKRG-PGDKEERGPGDKE 117
PG K ERG +K + GP G +GP GD +G PG G PG E GP ++
Sbjct: 869 PGPKGERG--EKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQD 926
Query: 118 KRGPGDKEKRG-------PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGPGDKEER 167
PGDK G PG E GP G +RGP G G QG+K +G E
Sbjct: 927 GP-PGDKGDDGEAGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEG- 984
Query: 168 APG 170
PG
Sbjct: 985 PPG 987
Score = 100 (40.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/114 (37%), Positives = 51/114 (44%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G G GP
Sbjct: 890 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEAGQTGSPGP 946
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 947 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 999
Score = 99 (39.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 44/119 (36%), Positives = 54/119 (45%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEK 118
PG E+G GD + GP G RGP G GP G G PG E+G PG+ +
Sbjct: 800 PGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 859
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
G PG+ GP G++ E+G G GP G K G G K GP G + P G
Sbjct: 860 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPG 918
Score = 48 (22.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 462 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 490
Score = 47 (21.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PG+K RG PG GP
Sbjct: 194 KGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 223
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 725 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 754
Score = 45 (20.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 394 DRGEIGPPGPRGEDGPEGPKGRG 416
Score = 41 (19.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E GP G K RG
Sbjct: 849 GEKGEPGEAGEPGLPGEGGPPGPKGERG 876
Score = 40 (19.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 685 EKGAPGEKGPQGPAGRDGLQGP 706
Score = 39 (18.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 329 PGHPGKEGPPGEKGGQGP 346
Score = 39 (18.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE E PG K ERG +K GP
Sbjct: 858 GEPGLPGEGGPPGPKGERG--EKGESGP 883
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RG+ PGD ERG G+ RG
Sbjct: 212 RGDPGPSGPPGPPGDDGERGDDGEVGPRG 240
Score = 33 (16.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 322 MPGADGPPGHPGKEGPPGEKGGQGP 346
>UNIPROTKB|Q14055 [details] [associations]
symbol:COL9A2 "Collagen alpha-2(IX) chain" species:9606
"Homo sapiens" [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0005594 "collagen type IX"
evidence=IDA] [GO:0030020 "extracellular matrix structural
constituent conferring tensile strength" evidence=IC]
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 EMBL:CH471059 GO:GO:0030198 GO:GO:0005788
GO:GO:0001501 HOGENOM:HOG000085653 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 MIM:603932 HOVERGEN:HBG004933 GO:GO:0030020
Orphanet:250984 Orphanet:166002 KO:K08131 GO:GO:0005594
EMBL:AF019406 EMBL:AL050341 EMBL:BC136326 EMBL:BC136327 EMBL:M95610
IPI:IPI00019088 PIR:S32436 RefSeq:NP_001843.1 UniGene:Hs.418012
ProteinModelPortal:Q14055 SMR:Q14055 IntAct:Q14055 STRING:Q14055
PhosphoSite:Q14055 DMDM:20137328 PaxDb:Q14055 PRIDE:Q14055
Ensembl:ENST00000372748 GeneID:1298 KEGG:hsa:1298 UCSC:uc001cfh.1
CTD:1298 GeneCards:GC01M040766 H-InvDB:HIX0028759 HGNC:HGNC:2218
MIM:120260 MIM:600204 MIM:614284 neXtProt:NX_Q14055
PharmGKB:PA26734 InParanoid:Q14055 OMA:TSDQHIV OrthoDB:EOG46T324
PhylomeDB:Q14055 GenomeRNAi:1298 NextBio:5271 ArrayExpress:Q14055
Bgee:Q14055 CleanEx:HS_COL9A2 Genevestigator:Q14055
GermOnline:ENSG00000049089 Uniprot:Q14055
Length = 689
Score = 114 (45.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/114 (38%), Positives = 56/114 (49%)
Query: 72 GPGDKEKRGPGDKEERGP-------GDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG- 120
GP KE PG + E GP GD+ ERGP G +G G K E+GP G +G
Sbjct: 364 GPPGKEGE-PGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGL 422
Query: 121 PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
PG K +G PG RG GD G PG+K E+G+ + PG K ++ G
Sbjct: 423 PGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGE----PGPKGQQGVRG 472
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/112 (39%), Positives = 54/112 (48%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERG-PGDR-EKRGPGDKEERGP-GDKEK 118
PG + G PG +G G + G PG + G PG K GPGD+ E GP G
Sbjct: 303 PGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGF 362
Query: 119 RGPGDKEKRGPGDKEERGP-------GDKEERGP-GDKEERG-QGDKEKRGP 161
GP KE PG + E GP GD+ ERGP G +G QG K ++GP
Sbjct: 363 SGPPGKEGE-PGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGP 413
Score = 106 (42.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 44/122 (36%), Positives = 57/122 (46%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGP-GD 115
PG++ RGP G+K G PG + +G G K GP G K G PG +G G
Sbjct: 264 PGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQ 323
Query: 116 KEKRG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGG 171
+ G PG + G PG +G PGD+ E GP G G KE PG + E P G
Sbjct: 324 AGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGE-PGPRGEIGPQG 382
Query: 172 LV 173
++
Sbjct: 383 IM 384
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 16 GPGDKEERGP 25
GPGD+ E GP
Sbjct: 347 GPGDQGEPGP 356
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 17 PGDKEERGPGDKKARGP 33
PG K GPGD+ GP
Sbjct: 342 PGTKG--GPGDQGEPGP 356
>UNIPROTKB|E7EMV2 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0005737 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AF106564 HGNC:HGNC:7734 ChiTaRS:NEFM IPI:IPI00908745
ProteinModelPortal:E7EMV2 SMR:E7EMV2 Ensembl:ENST00000518131
UCSC:uc011lac.1 ArrayExpress:E7EMV2 Bgee:E7EMV2 Uniprot:E7EMV2
Length = 698
Score = 118 (46.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/104 (36%), Positives = 55/104 (52%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPGD 123
P KEE G ++E+ G ++EE G K ++ G EK G +KEE G++E+ G+
Sbjct: 518 PEVKEEEGEKEEEE-GQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEE---GEQEE---GE 570
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
E G++ E KEE+ KEE Q KEK G G +EE+
Sbjct: 571 TEAEAEGEEAEA----KEEKKVEGKEEVEQETKEK-GSGREEEK 609
Score = 36 (17.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1 MQACRGERASDKEERGPGDKEE 22
M+ + E A +KEE ++EE
Sbjct: 484 MKEEKKEAAEEKEEEPEAEEEE 505
>RGD|2375 [details] [associations]
symbol:Col2a1 "collagen, type II, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001502 "cartilage condensation" evidence=ISO] [GO:0001894
"tissue homeostasis" evidence=ISO] [GO:0001958 "endochondral
ossification" evidence=ISO] [GO:0002062 "chondrocyte differentiation"
evidence=ISO] [GO:0003007 "heart morphogenesis" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=TAS] [GO:0005581 "collagen" evidence=ISO] [GO:0005585
"collagen type II" evidence=ISO;TAS] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006029 "proteoglycan
metabolic process" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0007605 "sensory perception of sound" evidence=ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO] [GO:0030199
"collagen fibril organization" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0035108 "limb morphogenesis"
evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048407 "platelet-derived
growth factor binding" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0051216 "cartilage development" evidence=IEP;ISO]
[GO:0060021 "palate development" evidence=ISO] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060351 "cartilage development
involved in endochondral bone morphogenesis" evidence=ISO]
[GO:0071773 "cellular response to BMP stimulus" evidence=ISO]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:2375 GO:GO:0046872 GO:GO:0051216 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201 HOGENOM:HOG000085654
HOVERGEN:HBG004933 KO:K06236 CTD:1280 Reactome:REACT_133391
GO:GO:0005585 EMBL:L48440 EMBL:K02804 EMBL:M10613 EMBL:X79816
IPI:IPI00394380 PIR:A05152 PIR:I60384 RefSeq:NP_037061.1
UniGene:Rn.10124 IntAct:P05539 STRING:P05539 PRIDE:P05539
GeneID:25412 KEGG:rno:25412 UCSC:RGD:2375 NextBio:606543
ArrayExpress:P05539 Genevestigator:P05539
GermOnline:ENSRNOG00000022282 Uniprot:P05539
Length = 1419
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 46/114 (40%), Positives = 54/114 (47%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG-PGDREKRG-PGDKEERG-------PG 114
PG+ GP G + GP K PGD E G PG +RG PG + RG PG
Sbjct: 162 PGEPGVSGPIGPRGPPGPAGK----PGDDGEAGKPGKAGERGLPGPQGARGFPGTPGLPG 217
Query: 115 DKEKRG-PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
K RG PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 218 VKGHRGYPGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 269
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 50/126 (39%), Positives = 56/126 (44%)
Query: 65 PGDKEERG-PG-D--KEKRG-PGDKEERG-PGDKEERGPGDREKRG-PGDKEERGP-GDK 116
PG K RG PG D K + G PG K E G PG E PG RG PG++ GP G
Sbjct: 216 PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAA 273
Query: 117 EKRG----PGDKEKRGP-GDKEERG----PGDKEERGPGDKEERG-QGDKEKRG-PGDKE 165
RG PG GP G G PG K E GP RG +G + RG PG+
Sbjct: 274 GARGNDGQPGPAGPPGPVGPAGGPGFLGAPGAKGEAGPTGA--RGPEGAQGSRGEPGNPG 331
Query: 166 ERAPGG 171
P G
Sbjct: 332 SPGPAG 337
Score = 98 (39.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/118 (38%), Positives = 53/118 (44%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG- 120
G RGP G GP G + G PG+ GP G R GP K PGD + G
Sbjct: 136 GPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPIGPRGPPGPAGK----PGDDGEAGK 191
Query: 121 PGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG----QGDKEKRG-PGDK-EERAPG 170
PG +RG PG + RG PG PG K RG G K + G PG K E +PG
Sbjct: 192 PGKAGERGLPGPQGARGFPGTPGL--PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 247
Score = 97 (39.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 44/119 (36%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEKRGP 121
PG GP K+ GP G + + G PG + PG + G PG+K E PGD GP
Sbjct: 846 PGPAGPPGPAGKD--GPKGARGDTGAPGRAGD--PGLQGPAGAPGEKGE--PGDD---GP 896
Query: 122 -GDKEKRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
G GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 897 SGSDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 954
Score = 52 (23.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK ERG PG + G PG GP
Sbjct: 62 QGPRGDRG-DKGERGAPGPRGRDGEPGTPGNPGP 94
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 240 KGESGSPGENGSPGPMGPRGLPGERGRTGP 269
Score = 51 (23.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERG-PGDKKARG 32
G+ D E PG ERG PG + ARG
Sbjct: 181 GKPGDDGEAGKPGKAGERGLPGPQGARG 208
Score = 34 (17.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 78 GPRGRDGEPGTPGNPGPPGP 97
>UNIPROTKB|A4FUW5 [details] [associations]
symbol:LEO1 "LEO1 protein" species:9913 "Bos taurus"
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0031442 "positive
regulation of mRNA 3'-end processing" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0016593 "Cdc73/Paf1
complex" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001711 "endodermal cell
fate commitment" evidence=IEA] GO:GO:0005730 GO:GO:0045944
GO:GO:0006378 GO:GO:0019827 eggNOG:NOG130430
GeneTree:ENSGT00550000074952 KO:K15177 InterPro:IPR007149
Pfam:PF04004 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 CTD:123169
HOGENOM:HOG000253934 HOVERGEN:HBG081913 OMA:NNGTMDL
EMBL:DAAA02029002 EMBL:BC120399 IPI:IPI00688485
RefSeq:NP_001076073.1 UniGene:Bt.18876 STRING:A4FUW5
Ensembl:ENSBTAT00000018400 GeneID:507524 KEGG:bta:507524
NextBio:20868102 Uniprot:A4FUW5
Length = 584
Score = 115 (45.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREK--RGPGDKEERGPGDKEKRGPGDK 124
D E+ D E+R ++ER +EE+ D E+ D E++ D+E+ D+
Sbjct: 183 DDEKMQNTDDEERPQLSEDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEERPQISDE 242
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
EK D E P D+E R D+EE+ + RG ++E
Sbjct: 243 EKMQNSDDERPQPSDEEHRHSDDEEEQDHKSESARGSDSEDE 284
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 67 DKEERGPG-DKEKRGPGDKEERGPG-DKEERGPGDREKRGPGDKEERGPGDKEK--RGPG 122
D EER G D++K D +E+ D EER ++R +EE+ D E+
Sbjct: 165 DDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSEDERQQLSEEEKANSDDERPVASDN 224
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
D EK+ D+E D+E+ D E D+E R D+EE+
Sbjct: 225 DDEKQNSDDEERPQISDEEKMQNSDDERPQPSDEEHRHSDDEEEQ 269
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEER--GPGDREKRGPGDKEERGPGDKEKRGPGD 123
G +++ D EK D EER G E++ D EK D EER +++R
Sbjct: 148 GREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSEDERQQLS 207
Query: 124 KEKRGPGDKEERGPGDKE-ERGPGDKEERGQ-GDKEKRGPGDKEERAP 169
+E++ D E D + E+ D EER Q D+EK D E P
Sbjct: 208 EEEKANSDDERPVASDNDDEKQNSDDEERPQISDEEKMQNSDDERPQP 255
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/109 (30%), Positives = 48/109 (44%)
Query: 66 GDKEER--GPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEE--RGPGDKEKRGP 121
G E++ D EK D EER ++ER E++ D E D EK+
Sbjct: 172 GSDEDKLQNSDDDEKMQNTDDEERPQLSEDERQQLSEEEKANSDDERPVASDNDDEKQNS 231
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
D+E+ D+E+ D E P D+E R D+E++ K E A G
Sbjct: 232 DDEERPQISDEEKMQNSDDERPQPSDEEHRHSDDEEEQD--HKSESARG 278
Score = 103 (41.3 bits), Expect = 0.00024, P = 0.00024
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 67 DKEERGPGDKEKRGPGDKEER--GPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
D E+ D E+R G E++ D E+ D E+R ++ER +E++ D
Sbjct: 157 DDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSEDERQQLSEEEKANSDD 216
Query: 125 EKRGPGDKE-ERGPGDKEERGP-GDKEERGQGDKEKRGPGDKEER 167
E+ D + E+ D EER D+E+ D E+ P D+E R
Sbjct: 217 ERPVASDNDDEKQNSDDEERPQISDEEKMQNSDDERPQPSDEEHR 261
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 10 SDKEERGPGDKEER 23
SD EER G E++
Sbjct: 164 SDDEERAQGSDEDK 177
Score = 33 (16.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 10 SDKEERGPGDKEERGPG 26
SD E+ D EER G
Sbjct: 156 SDDEKIQNSDDEERAQG 172
>ZFIN|ZDB-GENE-030131-9102 [details] [associations]
symbol:col1a1a "collagen, type I, alpha 1a"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0033333 "fin development" evidence=IMP]
[GO:0030278 "regulation of ossification" evidence=IMP] [GO:0033339
"pectoral fin development" evidence=IMP] [GO:0031101 "fin
regeneration" evidence=IMP] [GO:0033334 "fin morphogenesis"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 ZFIN:ZDB-GENE-030131-9102 GO:GO:0005737
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0033339
GO:GO:0031101 GO:GO:0005201 HOVERGEN:HBG004933 KO:K06236
GO:GO:0030278 EMBL:AY380817 IPI:IPI00492961 RefSeq:NP_954684.1
UniGene:Dr.20097 ProteinModelPortal:Q6U1J5 SMR:Q6U1J5 STRING:Q6U1J5
GeneID:337158 KEGG:dre:337158 CTD:337158 InParanoid:Q6U1J5
NextBio:20812086 ArrayExpress:Q6U1J5 Uniprot:Q6U1J5
Length = 1447
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 43/114 (37%), Positives = 49/114 (42%)
Query: 66 GDKEERGPGDKEKRGPGDKEERG-PGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
G K + GP K PG E G PG RG PG+R + GP G RG G GP
Sbjct: 259 GAKGDAGPAGP-KGEPGAPGENGTPGAMGPRGLPGERGRAGPPGAAGARGNDGAAGAAGP 317
Query: 122 -GDKEKRGPGDKEERGPGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAPGG 171
G GP GPG K E GP G + G QG + + G PG P G
Sbjct: 318 PGPTGPAGPPGFPG-GPGSKGEVGPQGSRGAEGPQGARGEAGNPGPAGPAGPAG 370
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/117 (36%), Positives = 50/117 (42%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERGPGDREKRGP-GDKEERG-PGDKEKRGP 121
PG+ E G PG RG + D E PG +RGP G + RG PG P
Sbjct: 189 PGEPGEAGAPGPMGPRGAAGPPGKNGEDGESGKPGRPGERGPPGPQGARGFPGTPGL--P 246
Query: 122 GDKEKRG----PGDKEERGP-GDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G K RG G K + GP G K E PG E G G RG PG++ P G
Sbjct: 247 GIKGHRGFSGLDGAKGDAGPAGPKGE--PGAPGENGTPGAMGPRGLPGERGRAGPPG 301
Score = 94 (38.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 43/120 (35%), Positives = 53/120 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKR-G----PGDKEERG-PGDKEK 118
PG GP GP KE + G++ E GP R G PG E+G PG +
Sbjct: 870 PGPSGNSGPPGPP--GPAGKEGQ-KGNRGETGPAGRTGEVGAAGPPGAPGEKGNPGAEGA 926
Query: 119 RGP-GDKEKRGPGDKEERG----PGDKEERG-PGDKEERGQGDKEKRGP-GDKEERAPGG 171
GP G +G G +RG PG + ERG PG G+ K+ GP G ER P G
Sbjct: 927 TGPAGIPGPQGIGG--QRGIVGLPGQRGERGFPGLPGPSGEIGKQ--GPSGPSGERGPPG 982
Score = 53 (23.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 211 GKNGEDGESGKPGRPGERGPPGPQGARG 238
Score = 48 (22.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 15 RG-PGDKEERGPGD 27
RG PGDK ERGP +
Sbjct: 102 RGSPGDKGERGPAN 115
Score = 46 (21.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 11 DKEERGPGDKEERG-PGDKKARGP 33
D + + P + RG PGDK RGP
Sbjct: 90 DDDFQEPSVEGPRGSPGDKGERGP 113
Score = 36 (17.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 6 GERAS--DKEERGPGD 19
G R S DK ERGP +
Sbjct: 100 GPRGSPGDKGERGPAN 115
>UNIPROTKB|Q8NFW1 [details] [associations]
symbol:COL22A1 "Collagen alpha-1(XXII) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 Reactome:REACT_118779 GO:GO:0005576
GO:GO:0030198 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005788
HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025 HSSP:Q15201
SMART:SM00210 HOVERGEN:HBG106599 EMBL:AF406780 EMBL:AC068476
EMBL:AC105130 EMBL:AC115720 EMBL:AP006262 EMBL:BC042075
EMBL:BC144535 IPI:IPI00303152 IPI:IPI00383440 IPI:IPI00945822
RefSeq:NP_690848.1 UniGene:Hs.117169 ProteinModelPortal:Q8NFW1
SMR:Q8NFW1 STRING:Q8NFW1 PhosphoSite:Q8NFW1 PaxDb:Q8NFW1
PeptideAtlas:Q8NFW1 PRIDE:Q8NFW1 DNASU:169044
Ensembl:ENST00000303045 Ensembl:ENST00000435777 GeneID:169044
KEGG:hsa:169044 UCSC:uc003yvd.3 UCSC:uc011ljo.2 CTD:169044
GeneCards:GC08M139669 H-InvDB:HIX0034283 HGNC:HGNC:22989
HPA:HPA024830 MIM:610026 neXtProt:NX_Q8NFW1 PharmGKB:PA134914705
InParanoid:Q8NFW1 KO:K16630 OMA:KRENGAQ OrthoDB:EOG4Z8XVT
PhylomeDB:Q8NFW1 GenomeRNAi:169044 NextBio:88784 Bgee:Q8NFW1
CleanEx:HS_COL22A1 Genevestigator:Q8NFW1 Uniprot:Q8NFW1
Length = 1626
Score = 112 (44.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEK 118
PG + E G G + G PG + GP G + +GP G K G PG E GP G +
Sbjct: 1287 PGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQ 1346
Query: 119 RGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAP 169
+G G+ G PG RGP G+ E+G PG + G+ G K +RG PG K ++ P
Sbjct: 1347 KGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGP 1406
Query: 170 GG 171
G
Sbjct: 1407 PG 1408
Score = 103 (41.3 bits), Expect = 0.00080, P = 0.00080
Identities = 43/115 (37%), Positives = 55/115 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERG-PGDREKRG-PGDKEERG-PGDKEKRG 120
PG K E+G G G+K E+G G G G + RG PG+ E G PG+ RG
Sbjct: 510 PGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRG 569
Query: 121 P-GDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERA-PG 170
P G GP G G G++ E+G G+K ERG D PGD ++ PG
Sbjct: 570 PQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGERGL-DGFPGKPGDTGQQGRPG 623
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
RGE+ + EE PG RG PG GP
Sbjct: 951 RGEKGAAGEEGSPGPVGPRGDPGAPGLPGP 980
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GER D PGD ++G PG GP
Sbjct: 601 KGERGLDGFPGKPGDTGQQGRPGPSGVAGP 630
Score = 43 (20.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 2 QACRGERASDKEERGPGDKEERG-PG 26
Q +GER +D E GD+ G PG
Sbjct: 1167 QGSQGERGADGEVGQKGDQGHPGVPG 1192
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 17 PGDKEERG-PGDKKARGP 33
PG E G PG + ARGP
Sbjct: 1257 PGKAGEPGLPGPEGARGP 1274
Score = 37 (18.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 6 GERASDKEERGPGDKEERGPGDK 28
G + + PG+ ERGP K
Sbjct: 1072 GPQGPAGRDGAPGNPGERGPPGK 1094
Score = 37 (18.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 2 QACRGERASDKEERGPGDKEERGPGDKKARGP 33
Q +G+R + PG + + G G GP
Sbjct: 1021 QCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGP 1052
Score = 36 (17.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
RGE E PG+ RGP G GP
Sbjct: 550 RGEPGELGEPGLPGEVGMRGPQGPPGLPGP 579
>RGD|61817 [details] [associations]
symbol:Col1a1 "collagen, type I, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001503 "ossification" evidence=IEP] [GO:0001568 "blood vessel
development" evidence=IEA;ISO] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0001957 "intramembranous
ossification" evidence=IEA;ISO] [GO:0001958 "endochondral
ossification" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA;ISO] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO] [GO:0005581 "collagen"
evidence=ISO] [GO:0005584 "collagen type I" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0009612 "response to mechanical stimulus" evidence=IEP]
[GO:0010035 "response to inorganic substance" evidence=IEP]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=IEA;ISO] [GO:0010812 "negative regulation of
cell-substrate adhesion" evidence=IEA;ISO] [GO:0015031 "protein
transport" evidence=IEA;ISO] [GO:0030199 "collagen fibril
organization" evidence=IEA;ISO] [GO:0030335 "positive regulation of
cell migration" evidence=IEA;ISO] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031960 "response to corticosteroid stimulus"
evidence=IEP] [GO:0032964 "collagen biosynthetic process"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0034505 "tooth mineralization"
evidence=IEA;ISO] [GO:0042060 "wound healing" evidence=IMP]
[GO:0042542 "response to hydrogen peroxide" evidence=IEP]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0043434 "response to peptide hormone stimulus" evidence=IEP]
[GO:0043588 "skin development" evidence=ISO] [GO:0043589 "skin
morphogenesis" evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048407 "platelet-derived growth
factor binding" evidence=IEA;ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0048706 "embryonic skeletal system
development" evidence=IEA;ISO] [GO:0051591 "response to cAMP"
evidence=IEP] [GO:0060325 "face morphogenesis" evidence=IEA;ISO]
[GO:0060346 "bone trabecula formation" evidence=IEA;ISO] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IEA;ISO] [GO:0070208 "protein heterotrimerization"
evidence=IEA;ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA;ISO] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEP] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=IEP]
[GO:0090263 "positive regulation of canonical Wnt receptor signaling
pathway" evidence=IEA;ISO] InterPro:IPR000885 InterPro:IPR001007
Pfam:PF00093 Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038 SMART:SM00214
RGD:61817 GO:GO:0005737 GO:GO:0045893 GO:GO:0005615 GO:GO:0009612
GO:GO:0071560 GO:GO:0046872 GO:GO:0015031 GO:GO:0007601
GO:GO:0071300 GO:GO:0043434 GO:GO:0030199 GO:GO:0007584
GO:GO:0010035 GO:GO:0007605 GO:GO:0010718 GO:GO:0030335
GO:GO:0042542 GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0042060 GO:GO:0071260 GO:GO:0001568
GO:GO:0001649 GO:GO:0051591 GO:GO:0034505 GO:GO:0090263
GO:GO:0001503 GO:GO:0010812 GO:GO:0060325 EMBL:CH473948
GO:GO:0032964 GO:GO:0071230 GO:GO:0048706 GO:GO:0001957
GO:GO:0034504 GO:GO:0001958 GO:GO:0060351 GO:GO:0005201
GO:GO:0043589 CTD:1277 GeneTree:ENSGT00660000095287
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 OMA:VAYMDQQ
GO:GO:0005584 GO:GO:0060346 GO:GO:0031960 EMBL:Z78279 EMBL:BC133728
EMBL:M11432 IPI:IPI00188909 PIR:A90559 RefSeq:NP_445756.1
UniGene:Rn.2953 PDB:3HQV PDB:3HR2 PDBsum:3HQV PDBsum:3HR2
ProteinModelPortal:P02454 IntAct:P02454 STRING:P02454 PRIDE:P02454
Ensembl:ENSRNOT00000005311 GeneID:29393 KEGG:rno:29393
UCSC:RGD:61817 InParanoid:A3KNA1 Reactome:REACT_150387
EvolutionaryTrace:P02454 NextBio:609017 ArrayExpress:P02454
Genevestigator:P02454 GermOnline:ENSRNOG00000003897 Uniprot:P02454
Length = 1453
Score = 111 (44.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 49/125 (39%), Positives = 55/125 (44%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 197 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 254
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERA 168
RG G K GP G K E PG E G PG RG G++ + GP G R
Sbjct: 255 GHRGFSGLDGAKGDTGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGPPGSAGARG 312
Query: 169 PGGLV 173
G V
Sbjct: 313 NDGAV 317
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 581 PGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 640
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 641 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGNNG-APG 693
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/122 (37%), Positives = 51/122 (41%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEK 118
PGDK E GP G RG PGD+ E GP G GP + + PG K E PGD
Sbjct: 767 PGDKGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGE--PGDTGV 823
Query: 119 RG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
+G PG GP G G PG K RG G G G + GP G P
Sbjct: 824 KGDAGPPGPAGPAGPPGPIGNVGAPGPKGSRGAAGPPGATGFPGAAGRVGPPGPSGNAGP 883
Query: 170 GG 171
G
Sbjct: 884 PG 885
Score = 99 (39.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 44/117 (37%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEKRG 120
PG GP G+ G PG K G PG G PG R GP PG K G
Sbjct: 365 PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP-QGPSGAPGPKGNSG 423
Query: 121 -PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PGDKEERA-PG 170
PG +G G K E GP G + GP G++ +RG +G+ G PG ER PG
Sbjct: 424 EPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPG 480
Score = 98 (39.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/120 (35%), Positives = 50/120 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK-EKRGPG 122
PG GP GP KE G G + E GP R PG+ GP G EK PG
Sbjct: 875 PGPSGNAGPPGPP--GPVGKEG-GKGPRGETGPAGR----PGEVGPPGPPGPAGEKGSPG 927
Query: 123 -DKEKRGPGDKEERG-PGDKEERG-PGDKEERG-------QGDKEKRGP-GDKEERAPGG 171
D PG +G G + G PG + ERG G+ K+GP G ER P G
Sbjct: 928 ADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 987
Score = 97 (39.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/121 (35%), Positives = 55/121 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG----PGDKEERGPGDREKRGPGDKEERG-PGDKEK 118
G + ERG PG++ +GP G RG PG+ +G + PG +G PG +
Sbjct: 663 GARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKG----DTGAPGAPGSQGAPGLQGM 718
Query: 119 RGPGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPG 170
PG++ G PG K +RG G K G PG RG G G PGDK E P
Sbjct: 719 --PGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPS 776
Query: 171 G 171
G
Sbjct: 777 G 777
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 216 GKNGDDGEAGKPGRPGERGPPGPQGARG 243
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 275 KGEPGSPGENGAPGQMGPRGLPGERGRPGP 304
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 642 GEAGKPGEQGVPGDLGAPGPSGARGERG 669
>MGI|MGI:88467 [details] [associations]
symbol:Col1a1 "collagen, type I, alpha 1" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development"
evidence=ISO;IMP] [GO:0001568 "blood vessel development"
evidence=ISO;IMP] [GO:0001957 "intramembranous ossification"
evidence=IGI] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0005581
"collagen" evidence=IMP;IDA] [GO:0005584 "collagen type I"
evidence=ISO;IMP;IDA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007601
"visual perception" evidence=ISO] [GO:0007605 "sensory perception
of sound" evidence=ISO] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=ISO] [GO:0010812
"negative regulation of cell-substrate adhesion" evidence=IDA]
[GO:0015031 "protein transport" evidence=IMP] [GO:0030199 "collagen
fibril organization" evidence=ISO] [GO:0030335 "positive regulation
of cell migration" evidence=ISO] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0032964 "collagen biosynthetic process"
evidence=ISO] [GO:0034504 "protein localization to nucleus"
evidence=ISO] [GO:0034505 "tooth mineralization" evidence=ISO]
[GO:0042060 "wound healing" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0043588 "skin development"
evidence=IMP] [GO:0043589 "skin morphogenesis" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0060325 "face morphogenesis" evidence=IGI] [GO:0060346 "bone
trabecula formation" evidence=IGI] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IMP] [GO:0070208 "protein heterotrimerization"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 MGI:MGI:88467 GO:GO:0005737
GO:GO:0045893 GO:GO:0043588 GO:GO:0005615 GO:GO:0071363
GO:GO:0046872 GO:GO:0015031 GO:GO:0007601 GO:GO:0071300
GO:GO:0043434 GO:GO:0030199 GO:GO:0007584 GO:GO:0010035
GO:GO:0007605 GO:GO:0010718 GO:GO:0030335 GO:GO:0042542
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0071260 GO:GO:0001568 GO:GO:0001649 GO:GO:0051591
GO:GO:0034505 GO:GO:0090263 GO:GO:0010812 GO:GO:0060325
GO:GO:0032964 GO:GO:0071230 GO:GO:0048706 GO:GO:0001957
GO:GO:0034504 GO:GO:0001958 GO:GO:0060351 GO:GO:0005201
GO:GO:0043589 CTD:1277 GeneTree:ENSGT00660000095287
HOVERGEN:HBG004933 KO:K06236 OMA:VAYMDQQ OrthoDB:EOG4S4PHP
GO:GO:0005584 GO:GO:0060346 ChiTaRS:COL1A1 GO:GO:0031960
EMBL:U08020 EMBL:AL662790 EMBL:AL606480 EMBL:BC050014 EMBL:BC059281
EMBL:K01688 EMBL:S67530 EMBL:S67482 EMBL:X54876 EMBL:M14423
EMBL:M17491 EMBL:K03036 EMBL:K03029 EMBL:K03030 EMBL:K03031
EMBL:K03032 EMBL:K03033 EMBL:K03034 EMBL:K03035 EMBL:X06753
EMBL:X15896 EMBL:X57981 IPI:IPI00329872 IPI:IPI00623191 PIR:I49558
PIR:S57243 RefSeq:NP_031768.2 UniGene:Mm.277735 UniGene:Mm.458212
ProteinModelPortal:P11087 SMR:P11087 IntAct:P11087 STRING:P11087
PhosphoSite:P11087 PaxDb:P11087 PRIDE:P11087
Ensembl:ENSMUST00000001547 GeneID:12842 KEGG:mmu:12842
UCSC:uc007kzn.1 InParanoid:P11087 NextBio:282376 PMAP-CutDB:P11087
Bgee:P11087 CleanEx:MM_COL1A1 Genevestigator:P11087
GermOnline:ENSMUSG00000001506 Uniprot:P11087
Length = 1453
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 581 PGKAGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 640
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 641 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGNNG-APG 693
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/124 (36%), Positives = 53/124 (42%)
Query: 65 PGDKEERGP-GDK-EKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDKEKRG- 120
PG + +GP G+ E G G RGP + D E PG ERGP G + RG
Sbjct: 185 PGPQGFQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGL 244
Query: 121 ------PGDKEKRG----PGDKEERGP-GDKEERGPGDKEERGQ-GDKEKRG-PGDKEER 167
PG K RG G K + GP G K E PG E G G RG PG++
Sbjct: 245 PGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRP 302
Query: 168 APGG 171
P G
Sbjct: 303 GPPG 306
Score = 102 (41.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 44/117 (37%), Positives = 49/117 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPG 122
PGDK E GP PG RG PGD+ E GP G GP + + PG K + PG
Sbjct: 767 PGDKGEAGPSGP----PGPTGARGAPGDRGEAGPPGPAGFAGPPGADGQ-PGAKGE--PG 819
Query: 123 DKEKRG----PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
D +G PG GP G G PG K RG G G PG P G
Sbjct: 820 DTGVKGDAGPPGPAGPAGPPGPIGNVGAPGPKGPRGAAGPPGATGFPGAAGRVGPPG 876
Score = 100 (40.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 43/120 (35%), Positives = 50/120 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK-EKRGPG 122
PG GP GP KE G G + E GP R PG+ GP G EK PG
Sbjct: 875 PGPSGNAGPPGPP--GPVGKEG-GKGPRGETGPAGR----PGEVGPPGPPGPAGEKGSPG 927
Query: 123 -DKEKRGPGDKEERG-PGDKEERG-PGDKEERG-------QGDKEKRGP-GDKEERAPGG 171
D PG +G G + G PG + ERG G+ K+GP G ER P G
Sbjct: 928 ADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPG 987
Score = 98 (39.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/121 (35%), Positives = 55/121 (45%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG----PGDKEERGPGDREKRGPGDKEERG-PGDKEK 118
G + ERG PG++ +GP G RG PG+ +G + PG +G PG +
Sbjct: 663 GARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKG----DTGAPGAPGSQGAPGLQGM 718
Query: 119 RGPGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPG 170
PG++ G PG K +RG G K G PG RG G G PGDK E P
Sbjct: 719 --PGERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPS 776
Query: 171 G 171
G
Sbjct: 777 G 777
Score = 95 (38.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 43/119 (36%), Positives = 51/119 (42%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG----PGDKEERG-PGD 115
PG + ERG PG GP G+ ++GP G ERGP G G PG+ G PG
Sbjct: 953 PGQRGERGFPG---LPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPG- 1008
Query: 116 KEKRGPG-DKEKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG D GD+ E GP G G PG G K GD+ E P G
Sbjct: 1009 -AEGSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKN----GDRGETGPAG 1062
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 216 GKNGDDGEAGKPGRPGERGPPGPQGARG 243
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 275 KGEPGSPGENGAPGQMGPRGLPGERGRPGP 304
Score = 41 (19.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 17 PGDKEERGP----GDKKARG 32
PGDK E GP G ARG
Sbjct: 767 PGDKGEAGPSGPPGPTGARG 786
Score = 41 (19.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PGD+ E GP G GP
Sbjct: 785 RGAPGDRGEAGPPGPAGFAGP 805
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 642 GEAGKPGEQGVPGDLGAPGPSGARGERG 669
Score = 36 (17.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1 MQACRGERASDKEERG-PGDKEERGP-GDKKARG 32
+Q GER + G PG K +RG G K A G
Sbjct: 715 LQGMPGERGA----AGLPGPKGDRGDAGPKGADG 744
Score = 34 (17.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 16 GP-GDKEERG-PGDKKARGP 33
GP G G PGDK GP
Sbjct: 756 GPIGPPGPAGAPGDKGEAGP 775
>UNIPROTKB|Q9XSJ7 [details] [associations]
symbol:COL1A1 "Collagen alpha-1(I) chain" species:9615
"Canis lupus familiaris" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0046872 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201
CTD:1277 HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236
OrthoDB:EOG4S4PHP EMBL:AF153062 RefSeq:NP_001003090.1
UniGene:Cfa.100 STRING:Q9XSJ7 GeneID:403651 KEGG:cfa:403651
InParanoid:Q9XSJ7 NextBio:20817156 Uniprot:Q9XSJ7
Length = 1460
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 588 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 647
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 648 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGANG-APG 700
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 48/123 (39%), Positives = 54/123 (43%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 204 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 261
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA 168
RG G K GP G K E PG E G PG RG G++ + G PG R
Sbjct: 262 GHRGFSGLDGAKGDAGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARG 319
Query: 169 PGG 171
G
Sbjct: 320 NDG 322
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 44/119 (36%), Positives = 52/119 (43%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG----PGDKEERG-PGD 115
PG + ERG PG GP G+ ++GP G ERGP G G PG+ G PG
Sbjct: 960 PGQRGERGFPG---LPGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPG- 1015
Query: 116 KEKRGPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG GP GD+ E GP G G PG G K GD+ E P G
Sbjct: 1016 -AEGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKN----GDRGETGPAG 1069
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/120 (35%), Positives = 50/120 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK-EKRGPG 122
PG GP GP KE G G + E GP R PG+ GP G EK PG
Sbjct: 882 PGPSGNAGPPGPP--GPAGKEG-GKGARGETGPAGR----PGEVGPPGPPGPAGEKGSPG 934
Query: 123 -DKEKRGPGDKEERG-PGDKEERG-PGDKEERG-------QGDKEKRGP-GDKEERAPGG 171
D PG +G G + G PG + ERG G+ K+GP G ER P G
Sbjct: 935 ADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGTSGERGPPG 994
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/122 (37%), Positives = 51/122 (41%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEK 118
PGDK E GP G RG PGD+ E GP G GP + + PG K E PGD
Sbjct: 774 PGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGE--PGDAGA 830
Query: 119 RG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
+G PG GP G G PG K RG G G G + GP G P
Sbjct: 831 KGDAGPPGPAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP 890
Query: 170 GG 171
G
Sbjct: 891 PG 892
Score = 97 (39.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/117 (34%), Positives = 50/117 (42%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGPG 122
G + ERG PG++ +GP G RG + PG +G PG + PG
Sbjct: 670 GARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM--PG 727
Query: 123 DKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPGG 171
++ G PG K +RG G K G PG RG G G PGDK E P G
Sbjct: 728 ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSG 784
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 223 GKNGDDGEAGKPGRPGERGPPGPQGARG 250
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE S E PG RG PG++ G
Sbjct: 282 KGEPGSPGENGAPGQMGPRGLPGERGRPG 310
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 17 PGDKEERGP----GDKKARG 32
PGDK E GP G ARG
Sbjct: 774 PGDKGEAGPSGPAGPTGARG 793
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PGD+ E GP G GP
Sbjct: 792 RGAPGDRGEPGPPGPAGFAGP 812
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 649 GEAGKPGEQGVPGDLGAPGPSGARGERG 676
>UNIPROTKB|P02453 [details] [associations]
symbol:COL1A1 "Collagen alpha-1(I) chain" species:9913 "Bos
taurus" [GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEA] [GO:0070208 "protein
heterotrimerization" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060346 "bone trabecula formation" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0048407
"platelet-derived growth factor binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043589 "skin morphogenesis" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034505 "tooth
mineralization" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032964 "collagen biosynthetic process"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0010812 "negative regulation of cell-substrate adhesion"
evidence=IEA] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005584 "collagen type I"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001957 "intramembranous ossification"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 GO:GO:0005737 GO:GO:0045893 GO:GO:0005615
GO:GO:0046872 GO:GO:0015031 GO:GO:0007601 GO:GO:0030199
GO:GO:0007605 GO:GO:0010718 GO:GO:0030335 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0071260
GO:GO:0001568 GO:GO:0001649 GO:GO:0034505 GO:GO:0090263
GO:GO:0010812 GO:GO:0060325 GO:GO:0032964 GO:GO:0071230
GO:GO:0048706 GO:GO:0001957 GO:GO:0034504 GO:GO:0001958
GO:GO:0060351 GO:GO:0005201 GO:GO:0043589 EMBL:BC105184
IPI:IPI00707857 PIR:A91193 RefSeq:NP_001029211.1 UniGene:Bt.23316
IntAct:P02453 STRING:P02453 PRIDE:P02453 Ensembl:ENSBTAT00000017420
GeneID:282187 KEGG:bta:282187 CTD:1277 GeneTree:ENSGT00660000095287
HOGENOM:HOG000085654 HOVERGEN:HBG004933 InParanoid:P02453 KO:K06236
OMA:VAYMDQQ OrthoDB:EOG4S4PHP NextBio:20806015 PMAP-CutDB:P02453
ArrayExpress:P02453 GO:GO:0005584 GO:GO:0060346 Uniprot:P02453
Length = 1463
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 591 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 650
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 651 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGANG-APG 703
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 48/123 (39%), Positives = 54/123 (43%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 207 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 264
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA 168
RG G K GP G K E PG E G PG RG G++ + G PG R
Sbjct: 265 GHRGFSGLDGAKGDAGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARG 322
Query: 169 PGG 171
G
Sbjct: 323 NDG 325
Score = 101 (40.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/122 (37%), Positives = 51/122 (41%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEK 118
PGDK E GP G RG PGD+ E GP G GP + + PG K E PGD
Sbjct: 777 PGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGE--PGDAGA 833
Query: 119 RG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
+G PG GP G G PG K RG G G G + GP G P
Sbjct: 834 KGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP 893
Query: 170 GG 171
G
Sbjct: 894 PG 895
Score = 97 (39.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/117 (34%), Positives = 50/117 (42%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGPG 122
G + ERG PG++ +GP G RG + PG +G PG + PG
Sbjct: 673 GARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM--PG 730
Query: 123 DKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPGG 171
++ G PG K +RG G K G PG RG G G PGDK E P G
Sbjct: 731 ERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSG 787
Score = 94 (38.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 43/119 (36%), Positives = 51/119 (42%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG----PGDKEERG-PGD 115
PG + ERG PG GP G+ ++GP G ERGP G G PG+ G PG
Sbjct: 963 PGQRGERGFPG---LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG- 1018
Query: 116 KEKRGPG-DKEKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG D GD+ E GP G G PG G K GD+ E P G
Sbjct: 1019 -AEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKS----GDRGETGPAG 1072
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 226 GKNGDDGEAGKPGRPGERGPPGPQGARG 253
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE S E PG RG PG++ G
Sbjct: 285 KGEPGSPGENGAPGQMGPRGLPGERGRPG 313
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 652 GEAGKPGEQGVPGDLGAPGPSGARGERG 679
>UNIPROTKB|P02452 [details] [associations]
symbol:COL1A1 "Collagen alpha-1(I) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001957
"intramembranous ossification" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0007584 "response to nutrient" evidence=IEA] [GO:0010812
"negative regulation of cell-substrate adhesion" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031960 "response
to corticosteroid stimulus" evidence=IEA] [GO:0042542 "response to
hydrogen peroxide" evidence=IEA] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEA] [GO:0051591 "response to cAMP"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0060346 "bone trabecula formation" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0071300 "cellular response
to retinoic acid" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IMP] [GO:0032964 "collagen
biosynthetic process" evidence=IMP] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0048706 "embryonic skeletal system
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005584 "collagen type I" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001568 "blood
vessel development" evidence=IMP] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0043589 "skin morphogenesis"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IDA]
[GO:0034505 "tooth mineralization" evidence=IMP] [GO:0034504
"protein localization to nucleus" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] [GO:0010718 "positive regulation
of epithelial to mesenchymal transition" evidence=IDA] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0048407
"platelet-derived growth factor binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0030168 "platelet activation" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0050900
"leukocyte migration" evidence=TAS] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Reactome:REACT_604 InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 Reactome:REACT_118779 Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0045893 GO:GO:0005615
GO:GO:0030168 GO:GO:0071363 GO:GO:0046872 GO:GO:0015031
GO:GO:0050900 GO:GO:0007601 GO:GO:0071300 GO:GO:0043434
GO:GO:0030199 GO:GO:0007584 GO:GO:0005788 GO:GO:0042802
GO:GO:0010035 GO:GO:0007605 GO:GO:0010718 GO:GO:0030335
GO:GO:0042542 GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0071260 GO:GO:0001568
Pathway_Interaction_DB:il4_2pathway
Pathway_Interaction_DB:lymphangiogenesis_pathway GO:GO:0001649
GO:GO:0051591 GO:GO:0034505 GO:GO:0090263 GO:GO:0010812
GO:GO:0060325 GO:GO:0032964 GO:GO:0071230 GO:GO:0048706
GO:GO:0001957 GO:GO:0034504 Orphanet:216812 GO:GO:0001958
GO:GO:0060351 GO:GO:0005201 GO:GO:0043589 CTD:1277
HOVERGEN:HBG004933 KO:K06236 OMA:VAYMDQQ OrthoDB:EOG4S4PHP
GO:GO:0005584 GO:GO:0060346 EMBL:Z74615 EMBL:AF017178 EMBL:AB209597
EMBL:BC036531 EMBL:M20789 EMBL:M36546 EMBL:X07884 EMBL:X00820
EMBL:J02829 EMBL:M10627 EMBL:J03559 EMBL:K01228 EMBL:J00110
EMBL:J00111 EMBL:J00112 EMBL:J00113 EMBL:K03179 EMBL:M11162
EMBL:L47667 EMBL:S64596 EMBL:M23213 EMBL:X06269 EMBL:M32798
EMBL:M55998 IPI:IPI00297646 PIR:I60114 RefSeq:NP_000079.2
UniGene:Hs.172928 UniGene:Hs.681002 PDB:1Q7D PDB:2LLP PDB:3EJH
PDB:3GXE PDBsum:1Q7D PDBsum:2LLP PDBsum:3EJH PDBsum:3GXE
ProteinModelPortal:P02452 SMR:P02452 DIP:DIP-36077N IntAct:P02452
STRING:P02452 PhosphoSite:P02452 DMDM:296439504
DOSAC-COBS-2DPAGE:P02452 PaxDb:P02452 PRIDE:P02452 DNASU:1277
Ensembl:ENST00000225964 GeneID:1277 KEGG:hsa:1277 UCSC:uc002iqm.3
GeneCards:GC17M048260 HGNC:HGNC:2197 HPA:HPA008405 HPA:HPA011795
MIM:114000 MIM:120150 MIM:130000 MIM:130060 MIM:166200 MIM:166210
MIM:166220 MIM:166710 MIM:259420 MIM:607907 neXtProt:NX_P02452
Orphanet:1310 Orphanet:31112 Orphanet:90309 Orphanet:99875
Orphanet:230845 Orphanet:230857 Orphanet:216796 Orphanet:216804
Orphanet:216820 PharmGKB:PA35041 InParanoid:P02452 PhylomeDB:P02452
ChEMBL:CHEMBL3030 ChiTaRS:COL1A1 DrugBank:DB00048 DrugBank:DB00039
EvolutionaryTrace:P02452 GenomeRNAi:1277 NextBio:5161
PMAP-CutDB:P02452 ArrayExpress:P02452 Bgee:P02452
Genevestigator:P02452 GermOnline:ENSG00000108821 GO:GO:0048407
GO:GO:0031960 Uniprot:P02452
Length = 1464
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 592 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 651
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 652 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGANG-APG 704
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 48/123 (39%), Positives = 54/123 (43%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 208 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 265
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA 168
RG G K GP G K E PG E G PG RG G++ + G PG R
Sbjct: 266 GHRGFSGLDGAKGDAGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARG 323
Query: 169 PGG 171
G
Sbjct: 324 NDG 326
Score = 101 (40.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 43/120 (35%), Positives = 50/120 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK-EKRGPG 122
PG GP GP KE G G + E GP R PG+ GP G EK PG
Sbjct: 886 PGPSGNAGPPGPP--GPAGKEG-GKGPRGETGPAGR----PGEVGPPGPPGPAGEKGSPG 938
Query: 123 -DKEKRGPGDKEERG-PGDKEERG-PGDKEERG-------QGDKEKRGP-GDKEERAPGG 171
D PG +G G + G PG + ERG G+ K+GP G ER P G
Sbjct: 939 ADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 998
Score = 100 (40.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 46/122 (37%), Positives = 51/122 (41%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEK 118
PGDK E GP G RG PGD+ E GP G GP + + PG K E PGD
Sbjct: 778 PGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGE--PGDAGA 834
Query: 119 RG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
+G PG GP G G PG K RG G G G + GP G P
Sbjct: 835 KGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP 894
Query: 170 GG 171
G
Sbjct: 895 PG 896
Score = 97 (39.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/117 (34%), Positives = 50/117 (42%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGPG 122
G + ERG PG++ +GP G RG + PG +G PG + PG
Sbjct: 674 GARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM--PG 731
Query: 123 DKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPGG 171
++ G PG K +RG G K G PG RG G G PGDK E P G
Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSG 788
Score = 96 (38.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 43/117 (36%), Positives = 50/117 (42%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEKR 119
G K E GP G + GP G + E GP G GP G+ G PG K G PG
Sbjct: 350 GAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAG-- 407
Query: 120 GPGDKEKRGPGDKEERG--PGDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG RGP + G PG K G PG +G G K + GP G + P G
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAG 464
Score = 94 (38.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 43/119 (36%), Positives = 51/119 (42%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG----PGDKEERG-PGD 115
PG + ERG PG GP G+ ++GP G ERGP G G PG+ G PG
Sbjct: 964 PGQRGERGFPG---LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG- 1019
Query: 116 KEKRGPG-DKEKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG D GD+ E GP G G PG G K GD+ E P G
Sbjct: 1020 -AEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKS----GDRGETGPAG 1073
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARG 254
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE S E PG RG PG++ G
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPG 314
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 17 PGDKEERGP----GDKKARG 32
PGDK E GP G ARG
Sbjct: 778 PGDKGESGPSGPAGPTGARG 797
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PGD+ E GP G GP
Sbjct: 796 RGAPGDRGEPGPPGPAGFAGP 816
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 653 GEAGKPGEQGVPGDLGAPGPSGARGERG 680
>UNIPROTKB|F1Q3I5 [details] [associations]
symbol:COL1A1 "Collagen alpha-1(I) chain" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093
Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51461 SMART:SM00038 SMART:SM00214 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201
GeneTree:ENSGT00660000095287 OMA:VAYMDQQ EMBL:AAEX03006535
Ensembl:ENSCAFT00000026953 Uniprot:F1Q3I5
Length = 1464
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/117 (40%), Positives = 54/117 (46%)
Query: 65 PGDKEERG-PGDKEKRGPGDKE-ERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG ERG PG GP K+ E G G GP G+R ++GP G +G PG
Sbjct: 592 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 651
Query: 119 RGPGDK--EKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAPG 170
G K E+ PGD GP G + ERG PG ERG QG GP APG
Sbjct: 652 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG---ERGVQGPPGPAGPRGANG-APG 704
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 48/123 (39%), Positives = 54/123 (43%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG+ GP G + GP GD E G PG ERGP G + RG PG PG K
Sbjct: 208 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL--PGMK 265
Query: 117 EKRG----PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA 168
RG G K GP G K E PG E G PG RG G++ + G PG R
Sbjct: 266 GHRGFSGLDGAKGDAGPAGPKGE--PGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARG 323
Query: 169 PGG 171
G
Sbjct: 324 NDG 326
Score = 101 (40.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/122 (37%), Positives = 51/122 (41%)
Query: 65 PGDKEERGP----GDKEKRG-PGDKEERGP-GDKEERGPGDREKRGPGDKEERGPGDKEK 118
PGDK E GP G RG PGD+ E GP G GP + + PG K E PGD
Sbjct: 778 PGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGE--PGDAGA 834
Query: 119 RG----PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
+G PG GP G G PG K RG G G G + GP G P
Sbjct: 835 KGDAGPPGPAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP 894
Query: 170 GG 171
G
Sbjct: 895 PG 896
Score = 100 (40.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 44/119 (36%), Positives = 52/119 (43%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG----PGDKEERG-PGD 115
PG + ERG PG GP G+ ++GP G ERGP G G PG+ G PG
Sbjct: 964 PGQRGERGFPG---LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPG- 1019
Query: 116 KEKRGPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+ PG GP GD+ E GP G G PG G K GD+ E P G
Sbjct: 1020 -AEGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKN----GDRGETGPAG 1073
Score = 100 (40.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 43/120 (35%), Positives = 50/120 (41%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK-EKRGPG 122
PG GP GP KE G G + E GP R PG+ GP G EK PG
Sbjct: 886 PGPSGNAGPPGPP--GPAGKEG-GKGARGETGPAGR----PGEVGPPGPPGPAGEKGSPG 938
Query: 123 -DKEKRGPGDKEERG-PGDKEERG-PGDKEERG-------QGDKEKRGP-GDKEERAPGG 171
D PG +G G + G PG + ERG G+ K+GP G ER P G
Sbjct: 939 ADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 998
Score = 97 (39.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/117 (34%), Positives = 50/117 (42%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGPG 122
G + ERG PG++ +GP G RG + PG +G PG + PG
Sbjct: 674 GARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGM--PG 731
Query: 123 DKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ----GDKEKRG-PGDKEERAPGG 171
++ G PG K +RG G K G PG RG G G PGDK E P G
Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSG 788
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARG 254
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+GE S E PG RG PG++ G
Sbjct: 286 KGEPGSPGENGAPGQMGPRGLPGERGRPG 314
Score = 41 (19.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 17 PGDKEERGP----GDKKARG 32
PGDK E GP G ARG
Sbjct: 778 PGDKGEAGPSGPAGPTGARG 797
Score = 40 (19.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PGD+ E GP G GP
Sbjct: 796 RGAPGDRGEPGPPGPAGFAGP 816
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE E+ PGD GP G + RG
Sbjct: 653 GEAGKPGEQGVPGDLGAPGPSGARGERG 680
>ZFIN|ZDB-GENE-030131-2281 [details] [associations]
symbol:col4a5 "collagen, type IV, alpha 5 (Alport
syndrome)" species:7955 "Danio rerio" [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0007412 "axon target recognition" evidence=IMP]
[GO:0030198 "extracellular matrix organization" evidence=IMP]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
ZFIN:ZDB-GENE-030131-2281 InterPro:IPR016187 SUPFAM:SSF56436
GO:GO:0030198 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0007412 GO:GO:0031290 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 OrthoDB:EOG45DWPF
Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772 KO:K06237 CTD:1287
OMA:MPMNMEP EMBL:CR354588 EMBL:CR936978 IPI:IPI00835382
RefSeq:NP_001116702.1 UniGene:Dr.77841 SMR:B0UXF7
Ensembl:ENSDART00000073827 GeneID:323561 KEGG:dre:323561
NextBio:20808319 Uniprot:B0UXF7
Length = 1659
Score = 121 (47.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 51/130 (39%), Positives = 63/130 (48%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRG-PGDKEERG----PGDKE 117
G+K +RG PGD GP G +G G K E+G PG+ KRG PG E G PGDK
Sbjct: 257 GEKGDRGIPGDTGFPGPPGPPGPQG-GQKGEKGEPGEAGKRGKPGKDGEPGLLGYPGDKG 315
Query: 118 KRGP-GDKEKRG-PGDKEERGP-GDKEERGP--------GDKEERGQ----GDKEKRG-P 161
+GP G + G G+K ++GP G RG G K +RG G K RG P
Sbjct: 316 DQGPPGLPGRDGFRGEKGDQGPPGPPSYRGDQFTGVGGIGPKGDRGDPGPSGIKGDRGLP 375
Query: 162 GDKEERAPGG 171
G + P G
Sbjct: 376 GIQGPPGPQG 385
Score = 119 (46.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 49/130 (37%), Positives = 65/130 (50%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERG----PGDKEERGP-GDREKRG-PGDKEERGP---- 113
G K E+G PG+ KRG PG E G PGDK ++GP G + G G+K ++GP
Sbjct: 282 GQKGEKGEPGEAGKRGKPGKDGEPGLLGYPGDKGDQGPPGLPGRDGFRGEKGDQGPPGPP 341
Query: 114 ---GDKEKR----GP-GDKEKRGP-GDKEERG-PGDKEERGP-GDKEERGQGDKEKRG-P 161
GD+ GP GD+ GP G K +RG PG + GP G G G +G P
Sbjct: 342 SYRGDQFTGVGGIGPKGDRGDPGPSGIKGDRGLPGIQGPPGPQGPPGIGGPGPPGSQGLP 401
Query: 162 GDKEERAPGG 171
G++ E+ G
Sbjct: 402 GERGEKGDEG 411
Score = 106 (42.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 44/120 (36%), Positives = 58/120 (48%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGPGDR--EKRGPGDKEERGPGDKEKRG 120
PG GP G+ G K E+G G K GP + E G D + G+K RG
Sbjct: 205 PGPPGPPGPKGNMGLNFQGPKGEKGDRGLKGPPGPPGQVGEVSGSPDTVIQ-QGEKGDRG 263
Query: 121 -PGDKEKRGP-GDKEERGPGDKEERG-PGDKEERGQGDKE-KRG----PGDKEERAPGGL 172
PGD GP G +G G K E+G PG+ +RG+ K+ + G PGDK ++ P GL
Sbjct: 264 IPGDTGFPGPPGPPGPQG-GQKGEKGEPGEAGKRGKPGKDGEPGLLGYPGDKGDQGPPGL 322
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RGE+ D + G K RGP
Sbjct: 73 RGEKGDDGPQGSIGPKGIRGP 93
>UNIPROTKB|P12106 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008985 SUPFAM:SSF49899 HOGENOM:HOG000085653
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 PROSITE:PS50025 HOVERGEN:HBG004933 SMART:SM00210
EMBL:M28659 EMBL:J03539 EMBL:K01702 EMBL:M11325 EMBL:M11324
IPI:IPI00819026 PIR:B34493 UniGene:Gga.16397
ProteinModelPortal:P12106 SMR:P12106 OrthoDB:EOG4P2Q36
Uniprot:P12106
Length = 920
Score = 118 (46.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/107 (38%), Positives = 54/107 (50%)
Query: 65 PGDKEERG----PGDKEKRG-PGDKEERGP-GDKEERG-PGDREKRG-PGDKEERGPGDK 116
PG K +RG PG K ++G PG + + G GD + G PG + G PGD RGP +
Sbjct: 658 PGGKGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGP--E 715
Query: 117 EKRG-PGDKEKRG-PGDK----EERGPGDKEERGPGDKEERGQGDKE 157
RG PG + RG PG + E+ PG +GP KE Q K+
Sbjct: 716 GSRGLPGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQ 762
Score = 115 (45.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 45/112 (40%), Positives = 52/112 (46%)
Query: 72 GPGDKEKRG-PGDKEERGP----GDKEERGP-GDREKRG-PGDKEERG-PGDKEKRG-PG 122
GPG + G PG + +RGP G K ERGP G R G PG K E G PG + G PG
Sbjct: 489 GPGPQGLPGAPGGQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGVDGREGIPG 548
Query: 123 DKEKRGPGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGGL 172
PG K E G PG + GP G +G PG K R P G+
Sbjct: 549 M-----PGAKGEPGKPGTPGDTGPPGLPGL-PGSPGMKGIPGPKGNRGPPGV 594
Score = 115 (45.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 48/123 (39%), Positives = 56/123 (45%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERG-PG-DKEERGPGDREKRG-PGDKEERGPGDKEKRG 120
G K ERGP G + G PG K E G PG D E PG +G PG + PGD G
Sbjct: 512 GPKGERGPQGTRGINGLPGPKGESGLPGVDGREGIPGMPGAKGEPG--KPGTPGDTGPPG 569
Query: 121 ----PGDKEKRG-PGDKEERGP----GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERA 168
PG +G PG K RGP G G PG++ G+ G RGP G + E
Sbjct: 570 LPGLPGSPGMKGIPGPKGNRGPPGVPGLMGNSGKPGEQGPEGEAGPTGPRGPPGSRGEPG 629
Query: 169 PGG 171
P G
Sbjct: 630 PAG 632
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRG----PGDKEERG- 112
PG + +RGP G K +RGP G + G PG K E G PG + G PG K E G
Sbjct: 499 PGGQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGVDGREGIPGMPGAKGEPGK 558
Query: 113 PGDKEKRGPGDKEKRGPGDKEERG-PGDKEERGP-GDKEERGQGDKE-KRGP-GDKEERA 168
PG GP PG +G PG K RGP G G K ++GP G+
Sbjct: 559 PGTPGDTGPPGLPGL-PGSPGMKGIPGPKGNRGPPGVPGLMGNSGKPGEQGPEGEAGPTG 617
Query: 169 PGG 171
P G
Sbjct: 618 PRG 620
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 17 PGDKEERGP-GDKKARGP 33
PGD +RGP G GP
Sbjct: 379 PGDPGKRGPPGPPGPPGP 396
Score = 33 (16.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 17 PGDKEERGP 25
PG K RGP
Sbjct: 583 PGPKGNRGP 591
>UNIPROTKB|H0YIQ2 [details] [associations]
symbol:YLPM1 "YLP motif-containing protein 1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR026314 GO:GO:0005634 EMBL:AC007956 HGNC:HGNC:17798
ChiTaRS:YLPM1 PANTHER:PTHR13413 Ensembl:ENST00000549293 Bgee:H0YIQ2
Uniprot:H0YIQ2
Length = 1595
Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/119 (36%), Positives = 53/119 (44%)
Query: 65 PGDKEERGPGD---KEKRGPGDKEERGP---GDKEERGP----GDREKRGP--GDKEERG 112
PG E+ PG + RG ERGP +ERGP G RE+ P ERG
Sbjct: 639 PGSSREKVPGGLQGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERG 698
Query: 113 PGDKEKRGPGDKEKRGPGDKE---ERGPGDKEERGPGDKEERGQGDKEKRGPGDK-EER 167
P RGPG +E RG G + +RGP E G+K D+ R P + EER
Sbjct: 699 P----PRGPGSRE-RGLGRSDFGRDRGPFRPEPGDGGEKMYPYHRDEPPRAPWNHGEER 752
Score = 113 (44.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 71 RGPGDKEKRGPGDKEERGPGDKEE-RGPGDREK--RGPGDKEERG---PGDKEKRGPGD- 123
RG G RGPG ++ DK R REK RG G ++ RG PG ++ PG
Sbjct: 592 RGRGQAISRGPGLVKQEDFRDKMMGRREDSREKMNRGEGSRD-RGLVRPGSSREKVPGGL 650
Query: 124 --KEKRGPGDKEERGP---GDKEERGP----GDKEE---RGQGDKEK---RGPGDKE 165
+ RG ERGP +ERGP G +E R G +E+ RGPG +E
Sbjct: 651 QGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERGPPRGPGSRE 707
Score = 103 (41.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 34/102 (33%), Positives = 45/102 (44%)
Query: 83 DKEERGPGDKEERGPGDREK----RGPGDKEERGPGDKE--KRGPGDKEKRGPGDKEERG 136
DK P +++ R G+R RGPG DK RG G RGPG ++
Sbjct: 550 DKGLPRPDNRDNRLEGNRGNSSSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQED 609
Query: 137 PGDK---EERGPGDKEERGQGDKEKRG---PGDKEERAPGGL 172
DK +K RG+G ++ RG PG E+ PGGL
Sbjct: 610 FRDKMMGRREDSREKMNRGEGSRD-RGLVRPGSSREKVPGGL 650
Score = 102 (41.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 36/112 (32%), Positives = 50/112 (44%)
Query: 65 PGDKEERGPGDKEK----RGPGDKEERGPGDKE--ERGPGDREKRGPGDKEERGPGDKEK 118
P +++ R G++ RGPG DK RG G RGPG ++ DK
Sbjct: 556 PDNRDNRLEGNRGNSSSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQEDFRDKMM 615
Query: 119 -RGPGDKEK--RGPGDKEERG---PGDKEERGPGD---KEERGQGDKEKRGP 161
R +EK RG G ++ RG PG E+ PG ++RG +RGP
Sbjct: 616 GRREDSREKMNRGEGSRD-RGLVRPGSSREKVPGGLQGSQDRGAAGSRERGP 666
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 5 RGERASDKEERGPGDKEERGPG 26
RGE + D+ PG E+ PG
Sbjct: 627 RGEGSRDRGLVRPGSSREKVPG 648
Score = 39 (18.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDK 28
G R + RGPG DK
Sbjct: 565 GNRGNSSSYRGPGQSRMEDTRDK 587
Score = 37 (18.1 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 5 RGERASDKE--ERGPGDKEERGPG 26
R E DK RG G RGPG
Sbjct: 580 RMEDTRDKGLVNRGRGQAISRGPG 603
Score = 33 (16.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 7 ERASDKEERGPGDKEERGP 25
E SD ++ P + GP
Sbjct: 453 ENLSDSQQEPPKSEVSEGP 471
>ZFIN|ZDB-GENE-070705-81 [details] [associations]
symbol:epb41a "erythrocyte membrane protein band
4.1a (elliptocytosis 1, RH-linked)" species:7955 "Danio rerio"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0008092 "cytoskeletal protein binding" evidence=IEA]
InterPro:IPR000299 InterPro:IPR000798 PRINTS:PR00661
PROSITE:PS50057 ZFIN:ZDB-GENE-070705-81 GO:GO:0005737 GO:GO:0005856
eggNOG:NOG242913 HOGENOM:HOG000228841 GO:GO:0019898
Gene3D:1.20.80.10 InterPro:IPR019749 InterPro:IPR019750
InterPro:IPR014352 InterPro:IPR019748 InterPro:IPR019747
InterPro:IPR018979 Pfam:PF00373 Pfam:PF09379 PRINTS:PR00935
SMART:SM00295 SUPFAM:SSF47031 PROSITE:PS00660 PROSITE:PS00661
GeneTree:ENSGT00700000104349 EMBL:BX950225 IPI:IPI00617807
UniGene:Dr.74759 Ensembl:ENSDART00000103810 Uniprot:A5PN61
Length = 474
Score = 114 (45.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 33/106 (31%), Positives = 60/106 (56%)
Query: 67 DKE-ERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDK-EKRGPGD 123
D E E G G+K ++G G+K+E+ +K+E+ +EK+ DKE+ +K EK+ +
Sbjct: 140 DAELESGKGEKGEKGEKGEKKEKK--EKKEK----KEKKEKADKEKLEKKEKPEKKEKAE 193
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
K+++ +K+E+ E++ G++E+ DKEK +K E P
Sbjct: 194 KKEKK--EKKEKKEKKNEDKAKGEEEKEKDKDKEKEKEQEKVEEEP 237
Score = 104 (41.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 68 KEERGPGDKEKRGPGDK-EERGPGDKEERGPGDREKRGPGDK--EERGPGDKEKRGPGDK 124
KE++ DKEK +K E++ +K+E+ +EK+ +K E++ G++EK DK
Sbjct: 169 KEKKEKADKEKLEKKEKPEKKEKAEKKEK----KEKKEKKEKKNEDKAKGEEEKEKDKDK 224
Query: 125 EKRGPGDKEERGPGDKEERGPGD---KEERGQGDKEKRGPGDKEE 166
EK +K E P E+ G + KEE + ++EK EE
Sbjct: 225 EKEKEQEKVEEEP-KPEDAGAAETEVKEEEEEKEEEKEEKNTVEE 268
Score = 103 (41.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 66 GDKEERGPGD--KEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
G+K+E+ KEK+ DKE+ +K E+ EK+ +K+E+ E + G+
Sbjct: 157 GEKKEKKEKKEKKEKKEKADKEKLEKKEKPEKKE-KAEKKEKKEKKEKKEKKNEDKAKGE 215
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKE-KRGPGDKEE 166
+EK DKE+ +K E P E+ G + E K +KEE
Sbjct: 216 EEKEKDKDKEKEKEQEKVEEEP-KPEDAGAAETEVKEEEEEKEE 258
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 67 DKEERGPGDK-EKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKE 125
DKE+ +K EK+ +K+E+ +K+E+ E + G++E+ DKEK +K
Sbjct: 176 DKEKLEKKEKPEKKEKAEKKEKK--EKKEKKEKKNEDKAKGEEEKEKDKDKEKEKEQEKV 233
Query: 126 KRGPGDKE----ERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
+ P ++ E ++EE +KEE+ ++E+ G K R P
Sbjct: 234 EEEPKPEDAGAAETEVKEEEEEKEEEKEEKNTVEEEE-GKKQKAARRP 280
Score = 45 (20.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 7 ERASDKE-ERGPGDKEERGP-GDKKAR 31
++ D E E G G+K E+G G+KK +
Sbjct: 136 DQKEDAELESGKGEKGEKGEKGEKKEK 162
Score = 40 (19.1 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 5 RGERASDKEERGPGDKEERGPGDK 28
+GE+ KE++ +K+E+ +K
Sbjct: 156 KGEKKEKKEKKEKKEKKEKADKEK 179
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 5 RGERASDKEERGPGDKEER 23
+GE+ KE++ +K+E+
Sbjct: 153 KGEKGEKKEKKEKKEKKEK 171
>UNIPROTKB|E1C9K0 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007259 "JAK-STAT cascade" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001711 "endodermal cell fate commitment"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0045944 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0080182 GO:GO:0007259 GO:GO:0016593 GO:GO:0045638 CTD:9646
KO:K15176 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:AADN02030593 IPI:IPI00580712
RefSeq:XP_420968.3 UniGene:Gga.54718 Ensembl:ENSGALT00000009016
GeneID:423035 KEGG:gga:423035 Uniprot:E1C9K0
Length = 1167
Score = 120 (47.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 66 GDKEER---GPGDKEKRGPGDKEERGPGDKEERGPGDREKR---GPGDKEERGPGDKEKR 119
G KE++ G G + K+G G+ +E D +E P R+K+ G G +++ G++E+
Sbjct: 897 GSKEKKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPMSRKKKKRKGSGSEQD---GEEEE- 952
Query: 120 GPGDKEKRGPGDKEERGPGDKE-ERGPGDKEERGQGDKEKRGPGDKEERAP 169
G K+KR K + G D+E E GP K+ R ++K+ P K ER P
Sbjct: 953 GERKKKKRRRPQKADEGSDDEENENGPRPKKRRPPKAEKKKAP--KPERLP 1001
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 20 KEERGPGDKK 29
K+E GPG KK
Sbjct: 578 KQEWGPGQKK 587
Score = 35 (17.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 12 KEERGPGDKE-ER 23
K+E GPG K+ ER
Sbjct: 578 KQEWGPGQKKFER 590
>UNIPROTKB|F1S3G7 [details] [associations]
symbol:COL5A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008201 "heparin binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0008201
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 PROSITE:PS50025 Pfam:PF02210 GO:GO:0005201
GO:GO:0005588 GeneTree:ENSGT00700000104155 OMA:KGDVGQD
EMBL:CU694567 Ensembl:ENSSSCT00000014931 Uniprot:F1S3G7
Length = 1614
Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 51/124 (41%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERG----PGDREKRG-PGDKEERG-PGDKE 117
PG + E GP G K + G EE PG E+G PG G PG K G PG
Sbjct: 622 PGPRGEDGPEGLKGQEGLAG-EEGPPGSAGEKGKLGLPGLPGYPGRPGPKGSIGFPGPL- 679
Query: 118 KRGP-GDKEKRG----PGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA 168
GP G+K KRG PG + ERGP G + ERG PG + G +GD + G PG E+
Sbjct: 680 --GPLGEKGKRGKAGQPGLEGERGPPGPRGERGQPGATGQPGPKGDVGQDGAPGFPGEKG 737
Query: 169 PGGL 172
GL
Sbjct: 738 LPGL 741
Score = 102 (41.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 45/119 (37%), Positives = 52/119 (43%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERGP----GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PG K PGD G GDK GP G ERGP G G PG +GP G
Sbjct: 847 PGPKG--APGDPGPTGLKGDKGPPGPTGANGPPGERGPVGPAGGIGLPGQSGGQGPVGPM 904
Query: 117 -EKRGPGDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
EK PG++ GP K+ PG GP G G+ GDK + G PG K + G
Sbjct: 905 GEKGSPGERGSPGPTGKDGI-PGPLGLPGPPGAAGPSGEEGDKGEVGAPGHKGSKGDKG 962
Score = 100 (40.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 39/114 (34%), Positives = 49/114 (42%)
Query: 66 GDKEERGP----GDKEKRGPGDKEERGPGDKEERG-PGDREKRG-PGDKEERGPGDKEKR 119
G+K + GP G K+GP E+ G+ G PGD G PG + GP EK
Sbjct: 1097 GEKGDSGPSGAAGPPGKKGPPG-EDGAKGNVGPTGLPGDLGPPGDPGVSGQDGPPG-EKG 1154
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
PGD GP G E GP G +RG + R + EK G+ P G
Sbjct: 1155 DPGDVGGPGPPGASGEPGPTGPPGKRGASGRMGREGREGEKGAKGEPGPDGPPG 1208
Score = 46 (21.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE+ E+ PG K + GP GD GP
Sbjct: 592 QGEKGEKGEDGFPGFKGDVGPKGDWGQPGP 621
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ + PG + ERGP G + RG
Sbjct: 683 GEKGKRGKAGQPGLEGERGPPGPRGERG 710
Score = 39 (18.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G+R D PG+K +RG G GP
Sbjct: 415 KGDRGFDGLPGLPGEKGQRGDFGHVGQPGP 444
Score = 34 (17.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 2 QACRGERASDKEERGPGDKEERG 24
+ +G+ EE PG E+G
Sbjct: 631 EGLKGQEGLAGEEGPPGSAGEKG 653
>UNIPROTKB|F1Q133 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:FAPTGEK EMBL:AAEX03013382
EMBL:AAEX03013383 Ensembl:ENSCAFT00000009808 Uniprot:F1Q133
Length = 1623
Score = 119 (46.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 46/113 (40%), Positives = 56/113 (49%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP----GDK 116
G+K E G PG + K G G+K E+G PG + G PG + G GDK E GP G
Sbjct: 230 GEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIA 289
Query: 117 EKRGP-GDKEKRG-PGDKEERG-PGDKEERG----PGDKEERGQGDKEKRGPG 162
GP G+K +RG PG RG PG K G PG E RG+ + G G
Sbjct: 290 IGPGPLGEKGERGYPGAPGLRGEPGPKGFPGLQGQPGPPEVRGRAQGQSMGAG 342
Score = 109 (43.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 65 PGDKEE-----RGP-GDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDK 116
PG+K + +GP GDK++ G G PG + + GD +G +K ++G PG +
Sbjct: 167 PGEKGQMGLSFQGPKGDKQQGDQGVSGPPGVPGQAQVQEKGDFATKG--EKGQKGEPGFQ 224
Query: 117 EKRGPGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G G+K + G PG + + G G+K E+G PG + G G + G GDK E P G
Sbjct: 225 GMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDSGYPGLPGREGFKGDKGEAGPPG 284
Score = 108 (43.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 43/112 (38%), Positives = 53/112 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGPGDKEERGPGDKEKRGP 121
PG+K + G PG RG PG K GDK + G PG K G DK + G +K
Sbjct: 856 PGEKGDHGFPGSSGPRGDPGFK-----GDKGDVGLPG---KPGSMDKVDMGSMKGQKGDQ 907
Query: 122 GDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G+K + GP GDK RG PG PG + GQ + PG K + GG
Sbjct: 908 GEKGQIGPTGDKGSRGDPGT-----PGVPGKDGQAGHPGQ-PGPKGDPGIGG 953
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 GDKEERG-PGDKKARGP 33
GD E G PG K RGP
Sbjct: 32 GDTGEPGLPGTKGTRGP 48
Score = 37 (18.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G++ E PG K RGP
Sbjct: 29 GQKGDTGEPGLPGTKGTRGP 48
Score = 35 (17.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+GER PG + + GP GP
Sbjct: 536 KGERGPPGGVGFPGSRGDIGPPGPPGFGP 564
>UNIPROTKB|F1RLM1 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 GO:GO:0007528 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
GO:GO:0005587 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
OMA:FAPTGEK EMBL:CT954227 EMBL:AEMK01179141 EMBL:CT954225
Ensembl:ENSSSCT00000010462 Uniprot:F1RLM1
Length = 1625
Score = 119 (46.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 40/98 (40%), Positives = 49/98 (50%)
Query: 81 PGDKEERGP-GDKEERG-PGDREKRG-PGDKEERG-PGDKEKRG-PGDKEKRGP-GDKEE 134
PG K E G G + G PG G PG+K + G PG RG PG K +G G +
Sbjct: 831 PGPKGEMGVMGTPGQPGSPGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGK 890
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERA-PG 170
G DK + G ++ QG+KEK GP GDK R PG
Sbjct: 891 PGSMDKVDMGSMKGQKGDQGEKEKTGPTGDKGSRGDPG 928
Score = 119 (46.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 44/107 (41%), Positives = 51/107 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG 120
PG G PG+K G PG RG PG K ++G G K G DK + G +K
Sbjct: 849 PGPAGAPGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGD 908
Query: 121 PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQ-GDKEKRGP-GD 163
G+KEK GP GDK RG PG PG + GQ G GP GD
Sbjct: 909 QGEKEKTGPTGDKGSRGDPG-----APGVPGKDGQAGHPGHPGPKGD 950
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-------PGDKEERGPGDREKRGP-GDKEERG--- 112
PG E+G +GP GDK ++G PG + + GD +G G K E G
Sbjct: 167 PGPPGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVKEKGDFATKGEKGQKGEPGFQG 226
Query: 113 -PGDKEKRGPGDKEKRG-PGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAP 169
PG EK PG RG PG E+G +K G PGD G +E GDK E P
Sbjct: 227 MPGIGEKGEPGKPGPRGKPGKDGEKG--EKGSPGFPGDSGYPGLPGREGL-KGDKGEAGP 283
Query: 170 GG 171
G
Sbjct: 284 PG 285
Score = 106 (42.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 46/131 (35%), Positives = 58/131 (44%)
Query: 65 PGDKEERG-------PGDKEKRG----PGDKEERGP-GDKEERG-PGDREKRGPGDKEER 111
PGDK ++G PG+K ++G PG GP G G PG PG+K ++
Sbjct: 1019 PGDKGDQGLAGFPGSPGEKGEKGSSGIPGLPGSPGPKGSPGSVGYPGS--PGSPGEKGDK 1076
Query: 112 G-PGDKEKRGPGDKEKRG-PGDKEERGP-GDKEERG----PGDKEERGQGDKEKRG---- 160
G PG PG K + G PG GP G K E G PG E+G+ RG
Sbjct: 1077 GLPG--LDGAPGSKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGF 1134
Query: 161 PGDKEERAPGG 171
PG K E+ G
Sbjct: 1135 PGTKGEKGSKG 1145
Score = 98 (39.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/115 (36%), Positives = 52/115 (45%)
Query: 65 PGDKEERG-------PGDKEKRG-PGDKEERG----PGDKEERG-PGDREKRGPGDKEER 111
PG+K E+G PG +G PG G PG+K ++G PG PG K E
Sbjct: 1034 PGEKGEKGSSGIPGLPGSPGPKGSPGSVGYPGSPGSPGEKGDKGLPG--LDGAPGSKGEA 1091
Query: 112 G-PGDKEKRGP-GDKEKRG----PGDKEERGPGDKEERG----PGDKEERG-QGD 155
G PG GP G K + G PG E+G RG PG K E+G +GD
Sbjct: 1092 GLPGKPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTKGEKGSKGD 1146
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 7 ERASDKEERGP-GDKEERGP-GDKKARG 32
+ S K ++G G+KE+ GP GDK +RG
Sbjct: 898 DMGSMKGQKGDQGEKEKTGPTGDKGSRG 925
Score = 51 (23.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 1 MQACRGERASDKEERGP-GDKEERG-PG 26
M+ +G++ +KE+ GP GDK RG PG
Sbjct: 902 MKGQKGDQG-EKEKTGPTGDKGSRGDPG 928
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 GDKEERG-PGDKKARGP 33
GD E G PG K RGP
Sbjct: 32 GDTGEPGLPGTKGTRGP 48
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 2 QACRGERASDKEERGPGDKEERGP 25
Q G++ E PG K RGP
Sbjct: 25 QGPAGQKGDTGEPGLPGTKGTRGP 48
Score = 35 (17.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+GER PG + + GP GP
Sbjct: 538 KGERGPPGGVGFPGSRGDIGPPGPPGFGP 566
>RGD|1562064 [details] [associations]
symbol:Otol1 "otolin 1" species:10116 "Rattus norvegicus"
[GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983 RGD:1562064
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OrthoDB:EOG48PMM8 CTD:131149 OMA:PFENFTL IPI:IPI00368078
RefSeq:XP_001067275.1 RefSeq:XP_227256.3 PRIDE:D4AD22
Ensembl:ENSRNOT00000035765 GeneID:295117 KEGG:rno:295117
UCSC:RGD:1562064 NextBio:639002 Uniprot:D4AD22
Length = 482
Score = 105 (42.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 42/103 (40%), Positives = 52/103 (50%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRG----PGDKEERGP-GDKE 117
G+K RG D +RG G K E+G G+K +G G KRG PG + + GP G+K
Sbjct: 244 GEKGYRG--DSGQRGEKGQKGEKGMEGEKGSKGDVGAEGKRGSDGLPGLRGDPGPKGEKG 301
Query: 118 KRG-PGDKEKRGP----GDKEERGP-GDKEERG-PGDKEERGQ 153
+ G PG GP G+K RGP G K RG G K E Q
Sbjct: 302 ETGSPGFTGPAGPKGELGNKGVRGPTGKKGSRGMKGSKGEATQ 344
Score = 101 (40.6 bits), Expect = 0.00076, P = 0.00076
Identities = 47/129 (36%), Positives = 64/129 (49%)
Query: 66 GDKEERGP-GDKEKRGP-GD------KEERG-PGDKEERG----PGDR-EKRGPGDKEER 111
GDK GP G K ++G GD K E+G PG G PG + EK G G+K R
Sbjct: 190 GDKGNIGPAGTKGQKGSKGDLCGNGTKGEKGDPGASGAHGFIGQPGAKGEKGGVGEKGYR 249
Query: 112 GPGDKEKRGP-GDKEKRG-PGDKEERGP-GDKEERG----PGDKEERG-QGDKEKRG-PG 162
G D +RG G K ++G G+K +G G + +RG PG + + G +G+K + G PG
Sbjct: 250 G--DSGQRGEKGQKGEKGMEGEKGSKGDVGAEGKRGSDGLPGLRGDPGPKGEKGETGSPG 307
Query: 163 DKEERAPGG 171
P G
Sbjct: 308 FTGPAGPKG 316
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARG 32
+G++ S + G G K E+G PG A G
Sbjct: 201 KGQKGSKGDLCGNGTKGEKGDPGASGAHG 229
>ZFIN|ZDB-GENE-070912-607 [details] [associations]
symbol:col11a1b "collagen, type XI, alpha 1b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-070912-607
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 SMART:SM00210 GeneTree:ENSGT00700000104155
UniGene:Dr.3536 EMBL:BX510342 EMBL:BX547933 EMBL:CT583637
EMBL:GQ485665 IPI:IPI00511026 RefSeq:NP_001171883.1
UniGene:Dr.42128 Ensembl:ENSDART00000049589 GeneID:555202
KEGG:dre:555202 CTD:555202 NextBio:20880850 Uniprot:D6MUD3
Length = 1815
Score = 117 (46.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 39/110 (35%), Positives = 55/110 (50%)
Query: 72 GPGDKEKRGP-GDKEERGPGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPGDKEKRGP 129
G G + +GP G ERGP GP G + GP + GP EK GPG+K GP
Sbjct: 1055 GEGPQGPQGPSGSPGERGPAGPG--GPIGQTGRNGP--QGPPGPAG-EKGGPGEKGPAGP 1109
Query: 130 GDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
++ +GP G +GP G+ ++G+ G+ ++G GDK E P G
Sbjct: 1110 AGRDGIQGPVGLPGPAGPQGPPGEDGDKGEVGEPGQKGSKGDKGEHGPPG 1159
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/102 (39%), Positives = 49/102 (48%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEK-RGP- 121
PG++ GPG GP G GP + GP EK GPG+K GP ++ +GP
Sbjct: 1068 PGERGPAGPG-----GPIGQTGRNGP--QGPPGPAG-EKGGPGEKGPAGPAGRDGIQGPV 1119
Query: 122 GDKEKRGP-GDKEERGPGDKEERG-PGDKEERGQGDKEKRGP 161
G GP G E GDK E G PG K +G DK + GP
Sbjct: 1120 GLPGPAGPQGPPGE--DGDKGEVGEPGQKGSKG--DKGEHGP 1157
Score = 106 (42.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 45/117 (38%), Positives = 53/117 (45%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEK 118
G+K E GP G RGP GD +G PG G PG + G G + PGDK
Sbjct: 1288 GEKGEAGPPGAAGPAGGRGPPGDDGPKGNPGPIGFPGDPGPPGEPGVGGLDGL-PGDKGD 1346
Query: 119 RGPGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPGG 171
GD + GP G E G PG +RGP G G QG+K +G E PGG
Sbjct: 1347 --DGDAGQPGPPGPSGEAGSPGPPGKRGPAGPAGTEGRQGEKGAKGEAGAE--GPGG 1399
Score = 105 (42.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 45/118 (38%), Positives = 55/118 (46%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEE-RGP----GDREKRGP----GDKEERG-PGD 115
G + GP EK GPG+K GP ++ +GP G +GP GDK E G PG
Sbjct: 1087 GPQGPPGPAG-EKGGPGEKGPAGPAGRDGIQGPVGLPGPAGPQGPPGEDGDKGEVGEPGQ 1145
Query: 116 KEKRGPGDKEKRGP-------GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
K +G DK + GP G GP G E GP G + GQ GD+ RG PG
Sbjct: 1146 KGSKG--DKGEHGPPGPAGPLGVVGAPGPAGSDGESGPRGQQGMFGQKGDEGPRGFPG 1201
Score = 105 (42.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGPG--DKEERGPGDKEK 118
PG E+G G K GP G + GP G + RGP G +G D GPG++
Sbjct: 870 PGANGEKGGRGIAGKAGPRGQRGPTGPRGGRGARGPTGKPGAKGTSGNDGPSGGPGERGP 929
Query: 119 RGP-GDKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPGGLV 173
+GP G GP K GP K+ PG +RG+ G + K GP PGG+V
Sbjct: 930 QGPQGPVGLTGP--KGPPGPPGKDGL-PGHPGQRGETGFQGKTGPP-----GPGGVV 978
Score = 100 (40.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 44/117 (37%), Positives = 51/117 (43%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG E G PG KRGP G G G+K +G E GPG K GP G + G
Sbjct: 1356 PGPSGEAGSPGPPGKRGPAGPAGTEGRQGEKGAKGEAGAE--GPGGKT--GPVGPQGPPG 1411
Query: 121 PGDKEK-RG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
E RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 1412 KSGAEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 1467
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+G +D GPG++ +GP G GP
Sbjct: 912 KGTSGNDGPSGGPGERGPQGPQGPVGLTGP 941
Score = 44 (20.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 13 EERGPGDKEERGPGDKKA-RGP 33
E+ GPG+K GP + +GP
Sbjct: 1097 EKGGPGEKGPAGPAGRDGIQGP 1118
Score = 40 (19.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 2 QACRGERASDKEERGPGDKEERGPGDKKARG 32
Q G +D PG +E PGDK A G
Sbjct: 729 QGLHGLAGADGPPGHPG--KEGPPGDKGAAG 757
Score = 40 (19.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+GE ++ GDK E GP
Sbjct: 1137 KGEVGEPGQKGSKGDKGEHGP 1157
Score = 36 (17.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 5 RGERASDKEERGPGDKEERG 24
+G+R D PG+K RG
Sbjct: 606 KGDRGFDGLPGLPGEKGHRG 625
>UNIPROTKB|F1NCR0 [details] [associations]
symbol:COL1A2 "Collagen alpha-2(I) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0005584 "collagen type I" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0007266 "Rho protein signal transduction"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043589
"skin morphogenesis" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0005615
GO:GO:0030199 GO:GO:0007179 GO:GO:0007266 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
GeneTree:ENSGT00660000095287 GO:GO:0005584 EMBL:AADN02000724
IPI:IPI00821202 Ensembl:ENSGALT00000015706 ArrayExpress:F1NCR0
Uniprot:F1NCR0
Length = 1318
Score = 112 (44.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKE 117
PG K ERG PG+ G PG + GP K PG+R GP G G G +
Sbjct: 896 PGFKGERGAPGNPGPSGALGAPGPHGQVGPSGK----PGNRGDPGPVGPVGPAGAFGPRG 951
Query: 118 KRGP-GDKEKRG-PGDKEERG-PGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
GP G + ++G PGDK RG PG K G PG + G QG GP G +
Sbjct: 952 LAGPQGPRGEKGEPGDKGHRGLPGLKGHNGLQGLPGLAGQHGDQGPPGNNGPAGPRGPPG 1011
Query: 169 PGG 171
P G
Sbjct: 1012 PSG 1014
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/124 (37%), Positives = 56/124 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG + GP G G PG+ G PG+ GP R+ PG K ERG PG+ G
Sbjct: 857 PGARGPSGPVGSPGPNGAPGEAGRDGNPGND---GPPGRDG-APGFKGERGAPGNPGPSG 912
Query: 121 ----PGDKEKRGPGDKE-ERG-PGDKEERGP-GDKEERG----QGDKEKRG-PGDKEERA 168
PG + GP K RG PG GP G RG QG + ++G PGDK R
Sbjct: 913 ALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEPGDKGHRG 972
Query: 169 PGGL 172
GL
Sbjct: 973 LPGL 976
Score = 47 (21.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG K ERGP G K GP
Sbjct: 689 PGAKGERGPKGPKGETGP 706
Score = 35 (17.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 16 GPGDKEERGP----GDKKARG 32
G GD+ E GP G ARG
Sbjct: 643 GAGDRGEGGPAGPAGPAGARG 663
>UNIPROTKB|P02467 [details] [associations]
symbol:COL1A2 "Collagen alpha-2(I) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IDA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0046872 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0005201 HOVERGEN:HBG004933 EMBL:M25963
EMBL:M25956 EMBL:M25959 EMBL:M25961 EMBL:M25962 EMBL:M25965
EMBL:M25964 EMBL:M25984 EMBL:M25957 EMBL:M25966 EMBL:M25967
EMBL:M25969 EMBL:M25970 EMBL:M25971 EMBL:M25972 EMBL:M25973
EMBL:M25974 EMBL:M25976 EMBL:M25977 EMBL:M25978 EMBL:M25979
EMBL:M25980 EMBL:M25981 EMBL:M25982 EMBL:M25983 EMBL:J00826
EMBL:J00821 EMBL:K00792 EMBL:J00830 EMBL:J00829 EMBL:J00837
EMBL:J00812 EMBL:J00811 EMBL:J00814 EMBL:J00815 EMBL:X02657
EMBL:K00794 EMBL:V00390 EMBL:M17608 EMBL:M10581 EMBL:M10540
EMBL:J00828 EMBL:J00827 EMBL:J00832 EMBL:J00831 EMBL:J00833
EMBL:J00822 IPI:IPI00914483 PIR:I50173 PIR:I50206 PIR:S10847
UniGene:Gga.5097 STRING:P02467 PRIDE:P02467 InParanoid:P02467
PMAP-CutDB:P02467 GO:GO:0005583 Uniprot:P02467
Length = 1362
Score = 112 (44.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKE 117
PG K ERG PG+ G PG + GP K PG+R GP G G G +
Sbjct: 940 PGFKGERGAPGNPGPSGALGAPGPHGQVGPSGK----PGNRGDPGPVGPVGPAGAFGPRG 995
Query: 118 KRGP-GDKEKRG-PGDKEERG-PGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
GP G + ++G PGDK RG PG K G PG + G QG GP G +
Sbjct: 996 LAGPQGPRGEKGEPGDKGHRGLPGLKGHNGLQGLPGLAGQHGDQGPPGNNGPAGPRGPPG 1055
Query: 169 PGG 171
P G
Sbjct: 1056 PSG 1058
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 47/124 (37%), Positives = 56/124 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG + GP G G PG+ G PG+ GP R+ PG K ERG PG+ G
Sbjct: 901 PGARGPSGPVGSPGPNGAPGEAGRDGNPGND---GPPGRDG-APGFKGERGAPGNPGPSG 956
Query: 121 ----PGDKEKRGPGDKE-ERG-PGDKEERGP-GDKEERG----QGDKEKRG-PGDKEERA 168
PG + GP K RG PG GP G RG QG + ++G PGDK R
Sbjct: 957 ALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEPGDKGHRG 1016
Query: 169 PGGL 172
GL
Sbjct: 1017 LPGL 1020
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG K ERGP G K GP
Sbjct: 733 PGAKGERGPKGPKGETGP 750
Score = 35 (17.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 16 GPGDKEERGP----GDKKARG 32
G GD+ E GP G ARG
Sbjct: 687 GAGDRGEGGPAGPAGPAGARG 707
>UNIPROTKB|F1P0H9 [details] [associations]
symbol:COL1A2 "Collagen alpha-2(I) chain" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0005584 "collagen type I" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0007266 "Rho protein signal transduction"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043589
"skin morphogenesis" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0005615
GO:GO:0030199 GO:GO:0007179 GO:GO:0007266 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
GeneTree:ENSGT00660000095287 KO:K06236 GO:GO:0005584 CTD:1278
IPI:IPI00914483 UniGene:Gga.5097 EMBL:AADN02000724
RefSeq:NP_001073182.2 PRIDE:F1P0H9 Ensembl:ENSGALT00000015703
GeneID:396243 KEGG:gga:396243 OMA:IGMPGAR NextBio:20816295
ArrayExpress:F1P0H9 Uniprot:F1P0H9
Length = 1363
Score = 112 (44.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKE 117
PG K ERG PG+ G PG + GP K PG+R GP G G G +
Sbjct: 941 PGFKGERGAPGNPGPSGALGAPGPHGQVGPSGK----PGNRGDPGPVGPVGPAGAFGPRG 996
Query: 118 KRGP-GDKEKRG-PGDKEERG-PGDKEERG----PGDKEERG-QGDKEKRGP-GDKEERA 168
GP G + ++G PGDK RG PG K G PG + G QG GP G +
Sbjct: 997 LAGPQGPRGEKGEPGDKGHRGLPGLKGHNGLQGLPGLAGQHGDQGPPGNNGPAGPRGPPG 1056
Query: 169 PGG 171
P G
Sbjct: 1057 PSG 1059
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 47/124 (37%), Positives = 56/124 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG + GP G G PG+ G PG+ GP R+ PG K ERG PG+ G
Sbjct: 902 PGARGPSGPVGSPGPNGAPGEAGRDGNPGND---GPPGRDG-APGFKGERGAPGNPGPSG 957
Query: 121 ----PGDKEKRGPGDKE-ERG-PGDKEERGP-GDKEERG----QGDKEKRG-PGDKEERA 168
PG + GP K RG PG GP G RG QG + ++G PGDK R
Sbjct: 958 ALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEPGDKGHRG 1017
Query: 169 PGGL 172
GL
Sbjct: 1018 LPGL 1021
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG K ERGP G K GP
Sbjct: 734 PGAKGERGPKGPKGETGP 751
Score = 35 (17.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 16 GPGDKEERGP----GDKKARG 32
G GD+ E GP G ARG
Sbjct: 688 GAGDRGEGGPAGPAGPAGARG 708
>UNIPROTKB|Q17RW2 [details] [associations]
symbol:COL24A1 "Collagen alpha-1(XXIV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Reactome:REACT_118779 GO:GO:0005576 GO:GO:0030198
EMBL:CH471097 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
PROSITE:PS50025 EMBL:AC099561 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 KO:K06236 SMART:SM00210 EMBL:AY244357
EMBL:AL356059 EMBL:AC104455 EMBL:AL359971 EMBL:AL445427
EMBL:BC113654 EMBL:BC117170 EMBL:AB209686 IPI:IPI00168920
IPI:IPI00878900 RefSeq:NP_690850.2 UniGene:Hs.659516
ProteinModelPortal:Q17RW2 STRING:Q17RW2 PhosphoSite:Q17RW2
DMDM:290457636 PaxDb:Q17RW2 PRIDE:Q17RW2 Ensembl:ENST00000370571
Ensembl:ENST00000436319 GeneID:255631 KEGG:hsa:255631
UCSC:uc001dlj.3 CTD:255631 GeneCards:GC01M086194 H-InvDB:HIX0018170
HGNC:HGNC:20821 HPA:HPA038423 MIM:610025 neXtProt:NX_Q17RW2
PharmGKB:PA134932695 HOVERGEN:HBG098141 InParanoid:Q17RW2
OMA:FPGDFGD OrthoDB:EOG4WQ11P PhylomeDB:Q17RW2 GenomeRNAi:255631
NextBio:92614 ArrayExpress:Q17RW2 Bgee:Q17RW2 CleanEx:HS_COL24A1
Genevestigator:Q17RW2 Uniprot:Q17RW2
Length = 1714
Score = 121 (47.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 49/119 (41%), Positives = 63/119 (52%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERG-PG-DKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +G PG PG K E+G PG D GP G R + GP GD+ ERG PG +
Sbjct: 1169 PGYRGHQGQPGPSGL--PGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226
Query: 119 RGP-GDKEKRGP-GDKEERG-PGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGGL 172
+G G RG G + G PGD+ E+G K ERG +G+K K+G PG + GL
Sbjct: 1227 KGHVGVPGLRGATGQQGPPGEPGDQGEQGL--KGERGSEGNKGKKGAPGPSGKPGIPGL 1283
Score = 40 (19.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RG++ + PGD +RGP
Sbjct: 641 RGKKGFKGRQGFPGDFGDRGP 661
Score = 33 (16.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
GE+ + GD+ +RGP
Sbjct: 936 GEQGIQGAKGEKGDQGKRGP 955
>UNIPROTKB|F1NI79 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104155 EMBL:AADN02026433
EMBL:AADN02026434 EMBL:AADN02026427 EMBL:AADN02026428
EMBL:AADN02026429 EMBL:AADN02026430 EMBL:AADN02026431
EMBL:AADN02026432 IPI:IPI00602965 Ensembl:ENSGALT00000004020
ArrayExpress:F1NI79 Uniprot:F1NI79
Length = 1702
Score = 113 (44.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 44/115 (38%), Positives = 53/115 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKEKRG 120
PG +GP G G PG E+G + PG R +RGP G + ERGP G K G
Sbjct: 736 PGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGK-PGPRGQRGPTGPRGERGPRGSTGKPG 794
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
P G+ GP G ERGP G + G PG K G K+ PG +R G
Sbjct: 795 PKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGL-PGHPGQRGETG 848
Score = 112 (44.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
PG K GP GP G ERGP GP R PG + GP EK PG+
Sbjct: 934 PGLKGNEGPPGPP--GPAGSPGERGPAGSA--GPIGLPGR-PGPQGPPGPAG-EKGAPGE 987
Query: 124 KEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+ P G
Sbjct: 988 KGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPG 1043
Score = 108 (43.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1186 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1242
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1243 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1295
Score = 98 (39.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 44/109 (40%), Positives = 53/109 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1076 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPA 1135
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E G PG K ERG+ K + GP
Sbjct: 1136 GGIGNPGAVGEKGEPGESGEPGLPG---EVGLPGPKGERGE--KGEAGP 1179
Score = 49 (22.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + +RGP G + RGP
Sbjct: 758 GEKGTRGTPGKPGPRGQRGPTGPRGERGP 786
Score = 47 (21.6 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1021 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1050
Score = 43 (20.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKAR-GP 33
D+ E GP G + E GP K R GP
Sbjct: 690 DRGEIGPPGPRGEDGPEGPKGRSGP 714
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K ++GP
Sbjct: 625 PGHPGKEGPPGEKGSQGP 642
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 490 KGDRGFDGLAGLPGEKGNRGEPG 512
Score = 40 (19.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 981 EKGAPGEKGPQGPAGRDGIQGP 1002
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGE PG+ ERG G+ RG
Sbjct: 508 RGEPGPHGPPGAPGEDGERGDDGEVGPRG 536
Score = 35 (17.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 618 MPGADGPPGHPGKEGPPGEKGSQGP 642
Score = 34 (17.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G + + + PG ERGP
Sbjct: 794 GPKGNSGGDGPPGPPGERGP 813
>UNIPROTKB|I3LSV6 [details] [associations]
symbol:COL2A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:0071599 "otic vesicle development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] [GO:0060174 "limb bud formation"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0006029 "proteoglycan metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005585 "collagen type II" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] [GO:0001894 "tissue homeostasis"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 GO:GO:0005737 GO:GO:0043066
GO:GO:0005615 GO:GO:0003007 GO:GO:0007601 GO:GO:0030199
GO:GO:0007417 GO:GO:0042472 GO:GO:0001894 GO:GO:0007605
GO:GO:0071773 InterPro:IPR008160 Pfam:PF01391 GO:GO:0071599
GO:GO:0005604 GO:GO:0001502 GO:GO:0060021 GO:GO:0002062
GO:GO:0010468 GO:GO:0060272 GO:GO:0006029 GO:GO:0001958
GO:GO:0060351 GO:GO:0005201 GeneTree:ENSGT00660000095287
GO:GO:0005585 GO:GO:0060174 GO:GO:0030903 OMA:CPICPTE
Ensembl:ENSSSCT00000031054 Uniprot:I3LSV6
Length = 1365
Score = 110 (43.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 47/107 (43%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG- 120
G RGP G K PGD E G PG ERGP G + RG PG PG K RG
Sbjct: 139 GPMGPRGPPGPPGK--PGDDGEAGKPGKSGERGPPGPQGARGFPGTPGL--PGVKGHRGY 194
Query: 121 PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 195 PGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 239
Score = 106 (42.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 47/124 (37%), Positives = 53/124 (42%)
Query: 65 PGDKEERGP-GDKEKRG-------PGDKEERG-PG-D--KEERG-PGDREKRG-PGDKEE 110
PG ERGP G + RG PG K RG PG D K E G PG + + G PG E
Sbjct: 162 PGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--EN 219
Query: 111 RGPGDKEKRG-PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
PG RG PG++ + GP G RG G GP G PG K E
Sbjct: 220 GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEA 279
Query: 168 APGG 171
P G
Sbjct: 280 GPTG 283
Score = 102 (41.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 45/116 (38%), Positives = 51/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 199 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 256
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG+ P G
Sbjct: 257 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGPRGEPGNPGSPGPAG 307
Score = 100 (40.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 41/114 (35%), Positives = 52/114 (45%)
Query: 73 PGDKEKRGPGDKEERGP-GDKEERGP----GDREKRGP-GDKEERG-PGDKEKRGPGDKE 125
PG GP K+ GP G + + GP GD +GP G E+G PG+ GP
Sbjct: 816 PGPPGPPGPSGKD--GPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGEDGPSGPDGPP 873
Query: 126 KRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 874 --GPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 924
Score = 97 (39.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 48/120 (40%), Positives = 54/120 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP----GDREKRG-PGDKEERG-PGDK 116
PG K E GP RGP G + RG PG+ GP G+ G PG K G PG
Sbjct: 273 PGAKGEAGPTGA--RGPEGAQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA 330
Query: 117 EKRGPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDK-EKRGPGDKEERAPGG 171
PG RGP G + GP G K + G PG +G QG K E PG E PGG
Sbjct: 331 G--APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPAVPG--AELQPGG 386
Score = 52 (23.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 151 GKPGDDGEAGKPGKSGERGPPGPQGARG 178
Score = 52 (23.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 210 KGESGSPGENGSPGPMGPRGLPGERGRTGP 239
Score = 49 (22.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK E+G PG + G PG GP
Sbjct: 33 QGPRGDRG-DKGEKGAPGPRGRDGEPGTPGNPGP 65
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RGER E PG + +GP
Sbjct: 614 RGERGFPGERGSPGSQGLQGP 634
Score = 34 (17.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 49 GPRGRDGEPGTPGNPGPPGP 68
>UNIPROTKB|Q2UY09 [details] [associations]
symbol:COL28A1 "Collagen alpha-1(XXVIII) chain"
species:9606 "Homo sapiens" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50279 SMART:SM00131
SMART:SM00327 Reactome:REACT_118779 GO:GO:0005576 GO:GO:0004867
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 EMBL:CH236948 GO:GO:0005788
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
HSSP:P18614 EMBL:AJ890451 EMBL:AJ890452 EMBL:AJ890453 EMBL:AC004982
EMBL:BC136892 IPI:IPI00235632 IPI:IPI00657936 IPI:IPI00885128
RefSeq:NP_001032852.2 UniGene:Hs.491104 ProteinModelPortal:Q2UY09
SMR:Q2UY09 MEROPS:I02.974 PhosphoSite:Q2UY09 DMDM:167009138
PaxDb:Q2UY09 PRIDE:Q2UY09 Ensembl:ENST00000399429
Ensembl:ENST00000435823 Ensembl:ENST00000444268 GeneID:340267
KEGG:hsa:340267 UCSC:uc003src.1 CTD:340267 GeneCards:GC07M007364
H-InvDB:HIX0034009 HGNC:HGNC:22442 MIM:609996 neXtProt:NX_Q2UY09
PharmGKB:PA143485437 eggNOG:NOG236064 HOVERGEN:HBG104822
InParanoid:Q2UY09 OMA:DPNFEIF OrthoDB:EOG42JNR4 GenomeRNAi:340267
NextBio:97768 ArrayExpress:Q2UY09 Bgee:Q2UY09 CleanEx:HS_COL28A1
Genevestigator:Q2UY09 Uniprot:Q2UY09
Length = 1125
Score = 121 (47.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 46/121 (38%), Positives = 59/121 (48%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERGPGDREKRG----PGDKEERG-PGDKEK 118
PG K ERGP G+ G+ ERGPG GD+ +RG PG K ++G PG
Sbjct: 259 PGIKGERGPKGNPGNAQKGEAGERGPGGIPGY-KGDKGERGECGKPGIKGDKGSPGPYGP 317
Query: 119 RGP-GDKEKRGP-GDKEERG-PGDKEERGP----GDKEERGQGDKEKRGPGDKEER--AP 169
+GP G + GP GD +G G+K E GP G G G + +G +E R AP
Sbjct: 318 KGPRGIQGITGPPGDPGPKGFQGNKGEPGPPGPYGSPGAPGIGQQGIKGERGQEGRPGAP 377
Query: 170 G 170
G
Sbjct: 378 G 378
Score = 117 (46.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 46/117 (39%), Positives = 56/117 (47%)
Query: 68 KEERGPGDKEKRGPGDKEERG----PGDKEERGP-GDREKRGPGDKEERGPGDKEKRGPG 122
K ER + EK PGD G PG K ERGP G+ G+ ERGPG G
Sbjct: 234 KCERKICECEKGDPGDPGPPGTHGNPGIKGERGPKGNPGNAQKGEAGERGPGGIPGY-KG 292
Query: 123 DKEKRG----PGDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
DK +RG PG K ++G PG +GP G + G GD +G G+K E P G
Sbjct: 293 DKGERGECGKPGIKGDKGSPGPYGPKGPRGIQGITGPPGDPGPKGFQGNKGEPGPPG 349
Score = 96 (38.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 38/106 (35%), Positives = 53/106 (50%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRG- 120
PG K E G G RGP +GP G+ G PG + PG E+ G K + G
Sbjct: 477 PGSKGEVGQMGPTGPRGPVGIGVQGPKGEPGSIGLPG--QPGVPG--EDGAAGKKGEAGL 532
Query: 121 PGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PG 162
PG + GP K + GP GD+ ++G G++ +RG G + +G PG
Sbjct: 533 PGARGPEGPPGKGQPGPKGDEGKKGSKGNQGQRGLPGPEGPKGEPG 578
Score = 47 (21.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 2 QACRGERASDKEERGPGDKEERGPGDKKARGP 33
Q +GER + PG PG RGP
Sbjct: 362 QGIKGERGQEGRPGAPGPIGVGEPGQPGPRGP 393
Score = 36 (17.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 259 PGIKGERGP 267
>UNIPROTKB|P12108 [details] [associations]
symbol:COL9A2 "Collagen alpha-2(IX) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 HOVERGEN:HBG004933 EMBL:M28660
EMBL:M16715 EMBL:AH002439 IPI:IPI00571405 PIR:S23296
UniGene:Gga.55810 UniGene:Gga.56014 UniGene:Gga.865
ProteinModelPortal:P12108 Uniprot:P12108
Length = 677
Score = 114 (45.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 49/125 (39%), Positives = 60/125 (48%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERG-PG-DKEERGPGDREKRGPGDKEER-GP-GD 115
PGD E+G G + RGP G K + G PG D ++ PG +G + R GP G
Sbjct: 271 PGDPGEKGELGGRGIRGPQGDIGPKGDMGLPGIDGKDGTPGIPGVKGTAGQPGRPGPPGH 330
Query: 116 KEKRG-PGDK-EKRGPGDKEERGP-GDKEERG-PG-DKEERGQGDKEKRG-PG---DKEE 166
+ + G PG K GPGDK E G G + G PG D E GD G PG D+ E
Sbjct: 331 RGQAGLPGQPGSKGGPGDKGEVGARGQQGITGTPGLDGEPGPPGDAGTAGVPGLKGDRGE 390
Query: 167 RAPGG 171
R P G
Sbjct: 391 RGPVG 395
Score = 38 (18.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1 MQACRGERASDKEERGPGDKEERGP-GDKKARG 32
+Q +G R PG + ++GP GD G
Sbjct: 186 LQGLKGHRGRPGALGEPGQQGKQGPKGDVGVSG 218
>UNIPROTKB|E1BHU7 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OMA:PFENFTL EMBL:DAAA02002380 IPI:IPI00717324 UniGene:Bt.60993
Ensembl:ENSBTAT00000024606 NextBio:20874084 Uniprot:E1BHU7
Length = 473
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/115 (38%), Positives = 54/115 (46%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERG-PGDKEK 118
PG+ GP GD GP G K ++G GD G GD+ RGP G G PG K +
Sbjct: 171 PGEPGGIGPKGDTGNIGPTGVKGQKGSKGDTCANGIKGDKGDRGPVGAPGLNGEPGAKGE 230
Query: 119 RGP-GDKEKRGPGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPG 170
+G GDK G D ERG G+K E G G+K +G E + D PG
Sbjct: 231 KGEVGDKGYSG--DSRERGEKGEKGEEGMKGEKGSKGDNGMEGKSGSDGLPGVPG 283
Score = 118 (46.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 46/117 (39%), Positives = 58/117 (49%)
Query: 66 GDKEERG-PGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEKRG 120
GD+ G PG K PG+ GP GD GP G + ++G GD G GDK RG
Sbjct: 157 GDQGASGVPGYPGK--PGEPGGIGPKGDTGNIGPTGVKGQKGSKGDTCANGIKGDKGDRG 214
Query: 121 P-GDKEKRG-PGDKEERGP-GDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
P G G PG K E+G GDK G D ERG+ G+K + G G+K + G+
Sbjct: 215 PVGAPGLNGEPGAKGEKGEVGDKGYSG--DSRERGEKGEKGEEGMKGEKGSKGDNGM 269
Score = 112 (44.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/114 (38%), Positives = 53/114 (46%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERG-PGDREKRGPGDKEERGPGDKEKRGP 121
PG K E+G GDK G D ERG G+K E G G++ +G E + D P
Sbjct: 225 PGAKGEKGEVGDKGYSG--DSRERGEKGEKGEEGMKGEKGSKGDNGMEGKSGSDGLPGVP 282
Query: 122 GDKEKRGPGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERA 168
GD +G +K E G PG GP G K RG G K RG G K E+A
Sbjct: 283 GDPGVKG--EKGELGIPGLMGPVGPKGELGSKGVRGSIGKKGSRGLKGSKGEQA 334
Score = 36 (17.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 5 RGERAS--DKEERG-PGDKEERGP 25
+G++ S D G GDK +RGP
Sbjct: 192 KGQKGSKGDTCANGIKGDKGDRGP 215
>MGI|MGI:88466 [details] [associations]
symbol:Col9a2 "collagen, type IX, alpha 2" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005594 "collagen type IX"
evidence=ISO] MGI:MGI:88466 HOGENOM:HOG000085653 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 HOVERGEN:HBG004933
OrthoDB:EOG46T324 EMBL:Z22923 EMBL:X63014 IPI:IPI00118542
PIR:A53330 UniGene:Mm.269384 ProteinModelPortal:Q07643 SMR:Q07643
STRING:Q07643 PhosphoSite:Q07643 PRIDE:Q07643 InParanoid:Q07643
ChiTaRS:COL9A2 CleanEx:MM_COL9A2 Genevestigator:Q07643
GermOnline:ENSMUSG00000028626 Uniprot:Q07643
Length = 688
Score = 114 (45.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 47/116 (40%), Positives = 58/116 (50%)
Query: 72 GPGDKEKRGPGDKEERGP-------GDKEERGP-GDREKRG-PGDKEERGP-GDKEKRG- 120
GP KE PG + E GP GD+ ERGP G +G G K E+GP G +G
Sbjct: 363 GPPGKEGE-PGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGL 421
Query: 121 PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERA-PG 170
PG K +G PG RG GD G PG+K E+GQ G+ +G G + E PG
Sbjct: 422 PGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGQSGEPGLKGQQGVRGETGYPG 477
Score = 109 (43.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 43/113 (38%), Positives = 53/113 (46%)
Query: 65 PG-DKEERGPGDKEKRGPGDKEERGPGDKEERG----PGDR-EKRGPGDKEERGP-GDKE 117
PG D ++ PG +G + R PG +G PG K GPGDK E G G
Sbjct: 302 PGIDGKDGTPGIPGMKGSAGQVGR-PGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPG 360
Query: 118 KRGPGDKEKRGPGDKEERGP-------GDKEERGP-GDKEERG-QGDKEKRGP 161
GP KE PG + E GP GD+ ERGP G +G QG K ++GP
Sbjct: 361 VSGPPGKEGE-PGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGP 412
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 44/123 (35%), Positives = 58/123 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP----GDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG++ RGP G+ ++G G + RGP G K GP G K G PG +G +
Sbjct: 263 PGEEGPRGPPGEAGEKGDVGSQGARGPQGITGPKGITGPPGIDGKDGTPGIPGMKGSAGQ 322
Query: 117 EKR--GPGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPG 170
R PG + G PG +G PGDK E PG + G G K G PG + E P
Sbjct: 323 VGRPGSPGHQGLAGVPGQPGTKGGPGDKGE--PGQQGLPGVSGPPGKEGEPGPRGEIGPQ 380
Query: 171 GLV 173
G++
Sbjct: 381 GIM 383
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 16 GPGDKEERGP-GDKKARGP 33
GPGDK E G G GP
Sbjct: 346 GPGDKGEPGQQGLPGVSGP 364
>UNIPROTKB|F1MSR8 [details] [associations]
symbol:COL2A1 "Collagen alpha-1(II) chain" species:9913
"Bos taurus" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 GeneTree:ENSGT00660000095287 KO:K06236
UniGene:Bt.21390 GeneID:407142 KEGG:bta:407142 CTD:1280
NextBio:20818406 EMBL:DAAA02012985 EMBL:DAAA02012986
IPI:IPI00786510 RefSeq:NP_001106695.1 PRIDE:F1MSR8
Ensembl:ENSBTAT00000017509 Uniprot:F1MSR8
Length = 1418
Score = 110 (43.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 47/107 (43%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG- 120
G RGP G K PGD E G PG ERGP G + RG PG PG K RG
Sbjct: 168 GPMGPRGPPGPPGK--PGDDGEAGKPGKSGERGPPGPQGARGFPGTPGL--PGVKGHRGY 223
Query: 121 PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 224 PGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 268
Score = 106 (42.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 47/124 (37%), Positives = 53/124 (42%)
Query: 65 PGDKEERGP-GDKEKRG-------PGDKEERG-PG-D--KEERG-PGDREKRG-PGDKEE 110
PG ERGP G + RG PG K RG PG D K E G PG + + G PG E
Sbjct: 191 PGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--EN 248
Query: 111 RGPGDKEKRG-PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
PG RG PG++ + GP G RG G GP G PG K E
Sbjct: 249 GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEA 308
Query: 168 APGG 171
P G
Sbjct: 309 GPTG 312
Score = 104 (41.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 42/114 (36%), Positives = 52/114 (45%)
Query: 73 PGDKEKRGPGDKEERGP-GDKEERGP----GDREKRGP-GDKEERG-PGDKEKRGPGDKE 125
PG GP K+ GP G + + GP GD +GP G E+G PGD GP
Sbjct: 845 PGPPGPPGPSGKD--GPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPP 902
Query: 126 KRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 903 --GPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 953
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 42/119 (35%), Positives = 59/119 (49%)
Query: 68 KEERGPGDKEKRG-PGD-KEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEKRG- 120
++ R PG K ++G PGD K+ GP G +GP G++ RG GDK E+G PG + + G
Sbjct: 26 QDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGE 85
Query: 121 PGDKEKRGP-GDKEERGP----GDKEERGPGDKEERGQGDKE--KRGP-GDKEERAPGG 171
PG GP G GP G+ + G +E+ G + +GP G R P G
Sbjct: 86 PGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPG 144
Score = 100 (40.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/116 (38%), Positives = 50/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 228 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 285
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG P G
Sbjct: 286 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGPRGEPGTPGSPGPAG 336
Score = 52 (23.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 180 GKPGDDGEAGKPGKSGERGPPGPQGARG 207
Score = 52 (23.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 239 KGESGSPGENGSPGPMGPRGLPGERGRTGP 268
Score = 49 (22.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK E+G PG + G PG GP
Sbjct: 62 QGPRGDRG-DKGEKGAPGPRGRDGEPGTPGNPGP 94
Score = 40 (19.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARGP 33
RGER E PG + +G PG GP
Sbjct: 629 RGERGFPGERGSPGSQGLQGARGLPGTPGTDGP 661
Score = 34 (17.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 78 GPRGRDGEPGTPGNPGPPGP 97
>UNIPROTKB|F1NR01 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026427
EMBL:AADN02026428 EMBL:AADN02026429 EMBL:AADN02026430
EMBL:AADN02026431 EMBL:AADN02026432 IPI:IPI00822317
Ensembl:ENSGALT00000039037 ArrayExpress:F1NR01 Uniprot:F1NR01
Length = 1773
Score = 119 (46.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 47/124 (37%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + GP G+K +GP G + G PG + +G G R +G G+K E G PG K
Sbjct: 695 PGHPGKEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGD 754
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG----PGDKEERAP 169
G GD+ + GP G + E GP G K GP GD G G+K K G PG + P
Sbjct: 755 MGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGP 814
Query: 170 GGLV 173
G +
Sbjct: 815 KGSI 818
Score = 112 (44.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
PG K GP GP G ERGP GP R PG + GP EK PG+
Sbjct: 1005 PGLKGNEGPPGPP--GPAGSPGERGPAGSA--GPIGLPGR-PGPQGPPGPAG-EKGAPGE 1058
Query: 124 KEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+ P G
Sbjct: 1059 KGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPG 1114
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/116 (37%), Positives = 53/116 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKEKRG 120
PG +GP G G PG E+G + PG R +RGP G + ERGP G K G
Sbjct: 806 PGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGK-PGPRGQRGPTGPRGERGPRGSTGKPG 864
Query: 121 P--GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
P G+ GP G ERGP G + G PG K G K+ PG +R G
Sbjct: 865 PKKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGL-PGHPGQRGETG 919
Score = 108 (43.1 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1257 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1313
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1314 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1366
Score = 98 (39.6 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 44/109 (40%), Positives = 53/109 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1147 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPA 1206
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E G PG K ERG+ K + GP
Sbjct: 1207 GGIGNPGAVGEKGEPGESGEPGLPG---EVGLPGPKGERGE--KGEAGP 1250
Score = 49 (22.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + +RGP G + RGP
Sbjct: 828 GEKGTRGTPGKPGPRGQRGPTGPRGERGP 856
Score = 47 (21.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1092 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1121
Score = 43 (20.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKAR-GP 33
D+ E GP G + E GP K R GP
Sbjct: 760 DRGEIGPPGPRGEDGPEGPKGRSGP 784
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 560 KGDRGFDGLAGLPGEKGNRGEPG 582
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K ++GP
Sbjct: 695 PGHPGKEGPPGEKGSQGP 712
Score = 40 (19.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1052 EKGAPGEKGPQGPAGRDGIQGP 1073
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGE PG+ ERG G+ RG
Sbjct: 578 RGEPGPHGPPGAPGEDGERGDDGEVGPRG 606
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 5 RGERASDKEERGPGDKEERGPGD 27
RGER PG K+ GD
Sbjct: 851 RGERGPRGSTGKPGPKKGNSGGD 873
Score = 35 (17.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 688 MPGADGPPGHPGKEGPPGEKGSQGP 712
>RGD|2373 [details] [associations]
symbol:Col11a2 "collagen, type XI, alpha 2" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development"
evidence=ISO;TAS] [GO:0001503 "ossification" evidence=IDA]
[GO:0001894 "tissue homeostasis" evidence=IEA;ISO] [GO:0002062
"chondrocyte differentiation" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=ISO] [GO:0005592 "collagen type XI" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0030199 "collagen fibril organization" evidence=IEA;ISO]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060021 "palate
development" evidence=ISO] [GO:0060023 "soft palate development"
evidence=ISO] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 RGD:2373 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001501
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 GO:GO:0001503 EMBL:BX883042 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 SMART:SM00210
GeneTree:ENSGT00700000104155 GO:GO:0005592 CTD:1302 IPI:IPI00417757
RefSeq:NP_997693.1 UniGene:Rn.45835 STRING:Q6MGB2
Ensembl:ENSRNOT00000045533 GeneID:294279 KEGG:rno:294279
UCSC:RGD:2373 NextBio:637878 Genevestigator:Q6MGB2 Uniprot:Q6MGB2
Length = 1617
Score = 116 (45.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 718 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 775
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 776 GLPGPQGPNGFPGPKGPPGPAGKDGL-PGHPGQRGEVGFQGKTGP 819
Score = 104 (41.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PG GP EK PG+ G G+ +GP G+R ++G G E GP G K G
Sbjct: 1099 PGGVGNLGPPG-EKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPKGPTG 1157
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G K GP G + GP G+ RG G K +G+ G+ + G PG E P G
Sbjct: 1158 DDGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGSQGEDGEPGQPGSPGPTGENGPPG 1214
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 654 DRGEVGVPGSRGEDGPEGPKGRTGP 678
Score = 41 (19.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K +RG D A+G
Sbjct: 469 KGDRGFDGLPGLPGEKGQRG--DTGAQG 494
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 887 GERGLPGTAGGPGLKGNEGP 906
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 985 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1014
>UNIPROTKB|F1P563 [details] [associations]
symbol:COL5A2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0048592 "eye
morphogenesis" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] InterPro:IPR000885
InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410 ProDom:PD002078
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038
SMART:SM00214 GO:GO:0030199 InterPro:IPR008160 Pfam:PF01391
GO:GO:0071230 GO:GO:0005201 GeneTree:ENSGT00660000095287
GO:GO:0005588 OMA:PDHKPVW EMBL:AADN02034560 EMBL:AADN02034559
IPI:IPI00594467 Ensembl:ENSGALT00000003954 ArrayExpress:F1P563
Uniprot:F1P563
Length = 1458
Score = 121 (47.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 47/108 (43%), Positives = 55/108 (50%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PGD PG K + GP K E GP G + GP G+ KRGP GD GP G +RG
Sbjct: 431 PGDPGV--PGFKGEAGP--KGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERG 486
Query: 121 -PGDKEKRG-PGDKEERGP-GDKEERGPGDKE--ERGQGDKEKRG-PG 162
PG+ RG PG GP G + ERGP + GQGD + G PG
Sbjct: 487 APGN---RGFPGSDGLPGPKGAQGERGPAGSSGPKGGQGDPGRPGEPG 531
Score = 118 (46.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 43/115 (37%), Positives = 49/115 (42%)
Query: 72 GPGDKEKRG----PGDKEERGP-GDKEERG----PGDREKRG-PGDKEERG-PGDKEKRG 120
GPGDK G PG GP G +RG PG R +RG PG G PG + G
Sbjct: 928 GPGDKGDAGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKQGPTG 987
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGL 172
P GDK GP G GP G+ GP + D GD+ E P GL
Sbjct: 988 PPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL 1042
Score = 108 (43.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 45/117 (38%), Positives = 55/117 (47%)
Query: 65 PGDKEERGP----GDKEKRGP-GDKEERGP-GDKEERG-PGDREKRG----PGDKE---E 110
PG + +GP G++ KRGP GD GP G ERG PG+R G PG K E
Sbjct: 449 PGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGE 508
Query: 111 RGPGDKE--KRGPGDKEKRG-PGDKEERG-PGDKEERGPGDK--EERGQGDKEKRGP 161
RGP K G GD + G PG RG G+ +GP K G G+ + GP
Sbjct: 509 RGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGGPGEDGRPGP 565
Score = 101 (40.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 44/120 (36%), Positives = 56/120 (46%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRG-P 121
G + ERG PG++ + G G E+G GP D K PG G PG +G P
Sbjct: 672 GPRGERGNPGERGEPGASGLAGEKGMAGGH--GP-DGPKGSPGPSGTPGDPGPPGLQGMP 728
Query: 122 GDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP----GDKEERAPGGLV 173
G++ G PG K +RG G+K G G+ RG G GP G+K E P GLV
Sbjct: 729 GERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPIGPMGPAGSTGEKGEPGPRGLV 788
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
RG + D E PG + GP G GP
Sbjct: 119 RGPQGIDGEPGIPGQPGDPGPPGHPTHTGP 148
Score = 34 (17.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
RGER + E PG G G GP
Sbjct: 674 RGERGNPGERGEPGASGLAGEKGMAGGHGP 703
>UNIPROTKB|F1NR03 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026427
EMBL:AADN02026428 EMBL:AADN02026429 EMBL:AADN02026430
EMBL:AADN02026431 EMBL:AADN02026432 IPI:IPI00818113
Ensembl:ENSGALT00000039034 ArrayExpress:F1NR03 Uniprot:F1NR03
Length = 1804
Score = 119 (46.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 47/124 (37%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + GP G+K +GP G + G PG + +G G R +G G+K E G PG K
Sbjct: 726 PGHPGKEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGD 785
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG----PGDKEERAP 169
G GD+ + GP G + E GP G K GP GD G G+K K G PG + P
Sbjct: 786 MGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGP 845
Query: 170 GGLV 173
G +
Sbjct: 846 KGSI 849
Score = 112 (44.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
PG K GP GP G ERGP GP R PG + GP EK PG+
Sbjct: 1036 PGLKGNEGPPGPP--GPAGSPGERGPAGSA--GPIGLPGR-PGPQGPPGPAG-EKGAPGE 1089
Query: 124 KEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+ P G
Sbjct: 1090 KGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPG 1145
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/116 (37%), Positives = 53/116 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKEKRG 120
PG +GP G G PG E+G + PG R +RGP G + ERGP G K G
Sbjct: 837 PGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGK-PGPRGQRGPTGPRGERGPRGSTGKPG 895
Query: 121 P--GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
P G+ GP G ERGP G + G PG K G K+ PG +R G
Sbjct: 896 PKKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGL-PGHPGQRGETG 950
Score = 108 (43.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1288 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1344
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1345 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1397
Score = 98 (39.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 44/109 (40%), Positives = 53/109 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1178 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPA 1237
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E G PG K ERG+ K + GP
Sbjct: 1238 GGIGNPGAVGEKGEPGESGEPGLPG---EVGLPGPKGERGE--KGEAGP 1281
Score = 49 (22.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + +RGP G + RGP
Sbjct: 859 GEKGTRGTPGKPGPRGQRGPTGPRGERGP 887
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1123 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1152
Score = 43 (20.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKAR-GP 33
D+ E GP G + E GP K R GP
Sbjct: 791 DRGEIGPPGPRGEDGPEGPKGRSGP 815
Score = 40 (19.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 591 KGDRGFDGLAGLPGEKGNRGEPG 613
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K ++GP
Sbjct: 726 PGHPGKEGPPGEKGSQGP 743
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1083 EKGAPGEKGPQGPAGRDGIQGP 1104
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGE PG+ ERG G+ RG
Sbjct: 609 RGEPGPHGPPGAPGEDGERGDDGEVGPRG 637
Score = 37 (18.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 5 RGERASDKEERGPGDKEERGPGD 27
RGER PG K+ GD
Sbjct: 882 RGERGPRGSTGKPGPKKGNSGGD 904
Score = 35 (17.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 719 MPGADGPPGHPGKEGPPGEKGSQGP 743
>UNIPROTKB|F1PHX8 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210 GO:GO:0005201
OMA:TIYEGIG SMART:SM00210 GeneTree:ENSGT00700000104155
EMBL:AAEX03006798 EMBL:AAEX03006799 EMBL:AAEX03006800
Ensembl:ENSCAFT00000031582 Uniprot:F1PHX8
Length = 1814
Score = 114 (45.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 765 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 824
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 825 GGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 884
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 885 RGQRGPTG 892
Score = 112 (44.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1035 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1092
Query: 117 -EKRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
EK PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1093 GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1152
Query: 168 APGG 171
P G
Sbjct: 1153 GPPG 1156
Score = 112 (44.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 882 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 941
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 942 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 997
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 46/123 (37%), Positives = 55/123 (44%)
Query: 65 PGDKEERGPGDKEKRGP----GDKEERGP-GDKEERG-PGDREKRG-PGDKEERGPGDKE 117
PG K ERG +K + GP G +GP GD +G PG G PG E GP ++
Sbjct: 1278 PGPKGERG--EKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQD 1335
Query: 118 KRGPGDKEKRG-------PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGPGDKEER 167
PGDK G PG E GP G +RGP G G QG+K +G E
Sbjct: 1336 GP-PGDKGDDGEAGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEG- 1393
Query: 168 APG 170
PG
Sbjct: 1394 PPG 1396
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 43/114 (37%), Positives = 51/114 (44%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G G GP
Sbjct: 1299 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEAGQTGSPGP 1355
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1356 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1408
Score = 99 (39.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 44/119 (36%), Positives = 54/119 (45%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEK 118
PG E+G GD + GP G RGP G GP G G PG E+G PG+ +
Sbjct: 1209 PGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 1268
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
G PG+ GP G++ E+G G GP G K G G K GP G + P G
Sbjct: 1269 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPG 1327
Score = 48 (22.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 871 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 899
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PG+K RG PG GP
Sbjct: 603 KGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 632
Score = 47 (21.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1134 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1163
Score = 45 (20.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 803 DRGEIGPPGPRGEDGPEGPKGRG 825
Score = 41 (19.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E GP G K RG
Sbjct: 1258 GEKGEPGEAGEPGLPGEGGPPGPKGERG 1285
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1094 EKGAPGEKGPQGPAGRDGLQGP 1115
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 738 PGHPGKEGPPGEKGGQGP 755
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RG+ PGD ERG G+ RG
Sbjct: 621 RGDPGPSGPPGPPGDDGERGDDGEVGPRG 649
Score = 33 (16.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 731 MPGADGPPGHPGKEGPPGEKGGQGP 755
>UNIPROTKB|F1NR02 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005588 "collagen type V" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0032964 "collagen biosynthetic process" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043206 "extracellular fibril organization"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0045112 "integrin
biosynthetic process" evidence=IEA] [GO:0048407 "platelet-derived
growth factor binding" evidence=IEA] [GO:0048592 "eye
morphogenesis" evidence=IEA] [GO:0051128 "regulation of cellular
component organization" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0030199 GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035313
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
GO:GO:0005604 GO:GO:0043206 Pfam:PF02210 GO:GO:0005201 OMA:TIYEGIG
GO:GO:0005588 GO:GO:0045112 GO:GO:0051128 SMART:SM00210
GeneTree:ENSGT00700000104155 EMBL:AADN02026433 EMBL:AADN02026434
EMBL:AADN02026427 EMBL:AADN02026428 EMBL:AADN02026429
EMBL:AADN02026430 EMBL:AADN02026431 EMBL:AADN02026432
IPI:IPI00821684 Ensembl:ENSGALT00000039035 ArrayExpress:F1NR02
Uniprot:F1NR02
Length = 1815
Score = 119 (46.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 47/124 (37%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + GP G+K +GP G + G PG + +G G R +G G+K E G PG K
Sbjct: 737 PGHPGKEGPPGEKGSQGPPGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGFKGD 796
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG----PGDKEERAP 169
G GD+ + GP G + E GP G K GP GD G G+K K G PG + P
Sbjct: 797 MGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGP 856
Query: 170 GGLV 173
G +
Sbjct: 857 KGSI 860
Score = 112 (44.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
PG K GP GP G ERGP GP R PG + GP EK PG+
Sbjct: 1047 PGLKGNEGPPGPP--GPAGSPGERGPAGSA--GPIGLPGR-PGPQGPPGPAG-EKGAPGE 1100
Query: 124 KEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+ P G
Sbjct: 1101 KGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPG 1156
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/116 (37%), Positives = 53/116 (45%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGP-GDKEERGP-GDKEKRG 120
PG +GP G G PG E+G + PG R +RGP G + ERGP G K G
Sbjct: 848 PGYPGRQGPKGSIGFPGFPGANGEKGTRGTPGK-PGPRGQRGPTGPRGERGPRGSTGKPG 906
Query: 121 P--GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
P G+ GP G ERGP G + G PG K G K+ PG +R G
Sbjct: 907 PKKGNSGGDGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGL-PGHPGQRGETG 961
Score = 108 (43.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1299 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1355
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1356 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1408
Score = 98 (39.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 44/109 (40%), Positives = 53/109 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1189 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPA 1248
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E G PG K ERG+ K + GP
Sbjct: 1249 GGIGNPGAVGEKGEPGESGEPGLPG---EVGLPGPKGERGE--KGEAGP 1292
Score = 49 (22.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + +RGP G + RGP
Sbjct: 870 GEKGTRGTPGKPGPRGQRGPTGPRGERGP 898
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1134 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1163
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKAR-GP 33
D+ E GP G + E GP K R GP
Sbjct: 802 DRGEIGPPGPRGEDGPEGPKGRSGP 826
Score = 40 (19.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 602 KGDRGFDGLAGLPGEKGNRGEPG 624
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K ++GP
Sbjct: 737 PGHPGKEGPPGEKGSQGP 754
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1094 EKGAPGEKGPQGPAGRDGIQGP 1115
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGE PG+ ERG G+ RG
Sbjct: 620 RGEPGPHGPPGAPGEDGERGDDGEVGPRG 648
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 5 RGERASDKEERGPGDKEERGPGD 27
RGER PG K+ GD
Sbjct: 893 RGERGPRGSTGKPGPKKGNSGGD 915
Score = 35 (17.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 730 MPGADGPPGHPGKEGPPGEKGSQGP 754
>UNIPROTKB|F1S021 [details] [associations]
symbol:COL5A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051128 "regulation of cellular component organization"
evidence=IEA] [GO:0048592 "eye morphogenesis" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0045112 "integrin biosynthetic process" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0043394
"proteoglycan binding" evidence=IEA] [GO:0043206 "extracellular
fibril organization" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0032964 "collagen
biosynthetic process" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0043588 GO:GO:0003007 GO:GO:0030199
GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035313 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 GO:GO:0001568
GO:GO:0005604 GO:GO:0032964 GO:GO:0043206 Pfam:PF02210
GO:GO:0005201 GO:GO:0048592 OMA:TIYEGIG GO:GO:0005588 GO:GO:0045112
GO:GO:0051128 SMART:SM00210 GeneTree:ENSGT00700000104155
EMBL:FP325143 Ensembl:ENSSSCT00000006323 ArrayExpress:F1S021
Uniprot:F1S021
Length = 1826
Score = 114 (45.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 777 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 836
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 837 GGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 896
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 897 RGQRGPTG 904
Score = 113 (44.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 42/110 (38%), Positives = 50/110 (45%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG-PG 122
PG+ E G PG E PG K ERG +K E GP PG K PGD +G PG
Sbjct: 1275 PGEAGEPGLPG--EGGPPGPKGERG--EKGESGPSGAAGP-PGPKGP--PGDDGPKGSPG 1327
Query: 123 DKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G PG E GP ++ PGDK + G+ + PG E P G
Sbjct: 1328 PVGFPGDPGPPGEPGPAG-QDGPPGDKGDDGEPG-QTGSPGPTGEPGPSG 1375
Score = 112 (44.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1047 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1104
Query: 117 -EKRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
EK PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1105 GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1164
Query: 168 APGG 171
P G
Sbjct: 1165 GPPG 1168
Score = 112 (44.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 894 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 953
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 954 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1009
Score = 108 (43.1 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1311 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1367
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1368 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1420
Score = 98 (39.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 43/108 (39%), Positives = 52/108 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1201 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP 1260
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERGPGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E PG K ERG+ K + GP
Sbjct: 1261 GGIGNPGAVGEKGEPGEAGEPGLPG--EGGPPGPKGERGE--KGESGP 1304
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 883 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 911
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PG+K RG PG GP
Sbjct: 615 KGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 644
Score = 47 (21.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1146 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1175
Score = 45 (20.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 815 DRGEIGPPGPRGEDGPEGPKGRG 837
Score = 41 (19.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E GP G K RG
Sbjct: 1270 GEKGEPGEAGEPGLPGEGGPPGPKGERG 1297
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1106 EKGAPGEKGPQGPAGRDGLQGP 1127
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 750 PGHPGKEGPPGEKGGQGP 767
Score = 39 (18.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE E PG K ERG +K GP
Sbjct: 1279 GEPGLPGEGGPPGPKGERG--EKGESGP 1304
Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RG+ PGD ERG G+ RG
Sbjct: 633 RGDPGPSGPPGPPGDDGERGDDGEVGPRG 661
Score = 33 (16.7 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 743 MPGADGPPGHPGKEGPPGEKGGQGP 767
>ZFIN|ZDB-GENE-081105-114 [details] [associations]
symbol:col4a1 "collagen, type IV, alpha 1"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 ZFIN:ZDB-GENE-081105-114 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
EMBL:CT033833 EMBL:FP103004 IPI:IPI00882894
Ensembl:ENSDART00000130442 Bgee:F1QG79 Uniprot:F1QG79
Length = 1644
Score = 116 (45.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 46/121 (38%), Positives = 58/121 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDR-EKRGPGDKEERG-PGDKEKRG- 120
PG E+G ++ PG ERG RG PG R E G GDK G PG G
Sbjct: 1118 PGPHGEKGQSGQDGI-PGFTGERGEPGVPGRGLPGSRGEPGGKGDKGNPGLPGIPGSPGI 1176
Query: 121 PGDKEKRG----PGDKEERGPGDKEERG-PGDKEERGQGDKEKRG-PGDKE---ERAPGG 171
PG K +G PGD+ PG ERG PG E +GD+ +G PG++ E+ P G
Sbjct: 1177 PGTKGDKGLSGLPGDQGR--PG---ERGLPGQAMEGPKGDRGDQGQPGERGATGEQGPPG 1231
Query: 172 L 172
+
Sbjct: 1232 I 1232
Score = 105 (42.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 48/125 (38%), Positives = 58/125 (46%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGPGDKEERGPGDREKRG----PGDKEERG-PGDKEK 118
PG K E G K RGP D + PG ERGP G PGDK G PG +
Sbjct: 543 PGTKGEPAKFGIKGDRGP-DGDFGVPGPPGERGPPGEPGIGRPGQPGDKGSAGFPGAPGR 601
Query: 119 RG-PGDKEKRG-----PGDKEERGPGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERA- 168
G G K + G PG + PG + E G PG + +RG G++ G PGDK +
Sbjct: 602 PGLQGAKGEAGKVISLPGP--QGAPGPRGESGRPGLQGDRGFPGERGVPGFPGDKGDPGL 659
Query: 169 PG-GL 172
PG GL
Sbjct: 660 PGIGL 664
Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
Identities = 43/115 (37%), Positives = 51/115 (44%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG E G GDK +G + G G+ GP G K G G+K E G PG+
Sbjct: 253 PGPPGETGSTGDKGDKGSCAPHQHGIKGEPGPPGPIGKPGKDGQSGEKGEIGFPGNPGLD 312
Query: 120 G-PGDKEKRGPGDKEERGPGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPG 170
G GDK +RGP PG G PG + E G QG+ GP G E PG
Sbjct: 313 GFKGDKGERGPPGYGAGSPGPPGPPGLPGAEGETGFQGEPGAPGPPGRYIEGPPG 367
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+G+R D + PG ERGP
Sbjct: 555 KGDRGPDGDFGVPGPPGERGP 575
Score = 40 (19.1 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 18 GDKEERGPGDKKARGP 33
GDK ERGP A P
Sbjct: 316 GDKGERGPPGYGAGSP 331
Score = 35 (17.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 11 DKEERGPGDKEERGPG 26
DK ERGP PG
Sbjct: 317 DKGERGPPGYGAGSPG 332
Score = 33 (16.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 2 QACRGERASDKEERGPGDKEERGPG 26
Q +G++ S PG E+G G
Sbjct: 1070 QGHKGDQGSIGYPGSPGKPGEKGVG 1094
>UNIPROTKB|P20908 [details] [associations]
symbol:COL5A1 "Collagen alpha-1(V) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0003007
"heart morphogenesis" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0051128 "regulation of cellular
component organization" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IMP;NAS] [GO:0032964 "collagen biosynthetic
process" evidence=IMP] [GO:0031012 "extracellular matrix"
evidence=IDA;IMP] [GO:0005178 "integrin binding" evidence=NAS]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0048592 "eye
morphogenesis" evidence=IMP] [GO:0043206 "extracellular fibril
organization" evidence=IMP] [GO:0043588 "skin development"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IMP] [GO:0045112 "integrin
biosynthetic process" evidence=IMP] [GO:0043394 "proteoglycan
binding" evidence=IPI] [GO:0005588 "collagen type V" evidence=IMP]
[GO:0048407 "platelet-derived growth factor binding" evidence=IDA]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0043588 GO:GO:0046872 GO:GO:0003007 GO:GO:0030199
GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0005178
GO:GO:0035313 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0001568
GO:GO:0005604 GO:GO:0032964 GO:GO:0043206 Pfam:PF02210
GO:GO:0005201 GO:GO:0048592 HOGENOM:HOG000085654 HOVERGEN:HBG004933
KO:K06236 MIM:130000 Orphanet:90309 GO:GO:0048407 EMBL:D90279
EMBL:M76729 EMBL:AL591890 EMBL:AL603650 EMBL:AL645768
IPI:IPI00844090 PIR:S18802 RefSeq:NP_000084.3 UniGene:Hs.210283
PDB:1A89 PDB:1A9A PDBsum:1A89 PDBsum:1A9A ProteinModelPortal:P20908
SMR:P20908 IntAct:P20908 STRING:P20908 PhosphoSite:P20908
DMDM:85687376 PaxDb:P20908 PRIDE:P20908 Ensembl:ENST00000371817
GeneID:1289 KEGG:hsa:1289 UCSC:uc004cfe.3 CTD:1289
GeneCards:GC09P137533 H-InvDB:HIX0008519 HGNC:HGNC:2209
HPA:CAB002743 MIM:120215 MIM:130010 neXtProt:NX_P20908
Orphanet:90318 PharmGKB:PA26724 OMA:TIYEGIG OrthoDB:EOG49GKHM
ChiTaRS:COL5A1 GenomeRNAi:1289 NextBio:5219 PMAP-CutDB:P20908
ArrayExpress:P20908 Bgee:P20908 CleanEx:HS_COL5A1
Genevestigator:P20908 GO:GO:0005588 GO:GO:0045112 GO:GO:0051128
SMART:SM00210 Uniprot:P20908
Length = 1838
Score = 114 (45.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 789 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 848
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 849 GGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 908
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 909 RGQRGPTG 916
Score = 113 (44.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 42/110 (38%), Positives = 50/110 (45%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRG-PG 122
PG+ E G PG E PG K ERG +K E GP PG K PGD +G PG
Sbjct: 1287 PGEAGEPGLPG--EGGPPGPKGERG--EKGESGPSGAAGP-PGPKGP--PGDDGPKGSPG 1339
Query: 123 DKEKRG-PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
G PG E GP ++ PGDK + G+ + PG E P G
Sbjct: 1340 PVGFPGDPGPPGEPGPAG-QDGPPGDKGDDGEPG-QTGSPGPTGEPGPSG 1387
Score = 112 (44.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1059 PGDRGLPGPVGALGLKGNEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1116
Query: 117 -EKRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
EK PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1117 GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1176
Query: 168 APGG 171
P G
Sbjct: 1177 GPPG 1180
Score = 112 (44.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 906 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 965
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 966 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1021
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1323 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1379
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1432
Score = 98 (39.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 43/108 (39%), Positives = 52/108 (48%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDK 116
GD+ RG PG +G PG E+G GD + GP G RGP G GP G
Sbjct: 1213 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP 1272
Query: 117 EKRG-PGDKEKRG-PGDKEERG-PGDKEERGPGDKEERGQGDKEKRGP 161
G PG ++G PG+ E G PG E PG K ERG+ K + GP
Sbjct: 1273 GGIGNPGAVGEKGEPGEAGEPGLPG--EGGPPGPKGERGE--KGESGP 1316
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 895 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 923
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PG+K RG PG GP
Sbjct: 627 KGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 656
Score = 47 (21.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1158 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1187
Score = 45 (20.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 827 DRGEIGPPGPRGEDGPEGPKGRG 849
Score = 41 (19.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E GP G K RG
Sbjct: 1282 GEKGEPGEAGEPGLPGEGGPPGPKGERG 1309
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1118 EKGAPGEKGPQGPAGRDGLQGP 1139
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 762 PGHPGKEGPPGEKGGQGP 779
Score = 39 (18.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE E PG K ERG +K GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERG--EKGESGP 1316
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RG+ PGD ERG G+ RG
Sbjct: 645 RGDPGPSGPPGPPGDDGERGDDGEVGPRG 673
Score = 33 (16.7 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 755 MPGADGPPGHPGKEGPPGEKGGQGP 779
>UNIPROTKB|D4A008 [details] [associations]
symbol:Col11a2 "Protein Col11a2" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:2373 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 IPI:IPI00558837
Ensembl:ENSRNOT00000048519 ArrayExpress:D4A008 Uniprot:D4A008
Length = 1655
Score = 116 (45.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 738 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 795
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 796 GLPGPQGPNGFPGPKGPPGPAGKDGL-PGHPGQRGEVGFQGKTGP 839
Score = 104 (41.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PG GP EK PG+ G G+ +GP G+R ++G G E GP G K G
Sbjct: 1119 PGGVGNLGPPG-EKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPKGPTG 1177
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G K GP G + GP G+ RG G K +G+ G+ + G PG E P G
Sbjct: 1178 DDGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGSQGEDGEPGQPGSPGPTGENGPPG 1234
Score = 44 (20.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 674 DRGEVGVPGSRGEDGPEGPKGRTGP 698
Score = 41 (19.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K +RG D A+G
Sbjct: 474 KGDRGFDGLPGLPGEKGQRG--DTGAQG 499
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 907 GERGLPGTAGGPGLKGNEGP 926
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1005 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1034
>UNIPROTKB|P02459 [details] [associations]
symbol:COL2A1 "Collagen alpha-1(II) chain" species:9913
"Bos taurus" [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:0071599 "otic vesicle development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] [GO:0060174 "limb bud formation"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0006029 "proteoglycan metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005585 "collagen type II" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] [GO:0001894 "tissue homeostasis"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005737 GO:GO:0043066
GO:GO:0005615 GO:GO:0046872 GO:GO:0003007 GO:GO:0007601
GO:GO:0030199 GO:GO:0007417 GO:GO:0042472 GO:GO:0001894
GO:GO:0007605 GO:GO:0071773 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0071599 GO:GO:0005604 GO:GO:0001502
GO:GO:0060021 GO:GO:0002062 GO:GO:0010468 GO:GO:0060272
GO:GO:0006029 GO:GO:0001958 GO:GO:0060351 GO:GO:0005201
GeneTree:ENSGT00660000095287 HOGENOM:HOG000085654
HOVERGEN:HBG004933 KO:K06236 EMBL:AAFC03017082 EMBL:AAFC03017085
EMBL:AAFC03056593 EMBL:L28918 EMBL:AF138883 EMBL:AF138957
EMBL:X02420 IPI:IPI01028216 PIR:A90369 PIR:I45876
RefSeq:NP_001001135.2 UniGene:Bt.21390 IntAct:P02459 STRING:P02459
PRIDE:P02459 Ensembl:ENSBTAT00000017505 GeneID:407142
KEGG:bta:407142 CTD:1280 InParanoid:Q9XT25 OMA:SSCRICV
Reactome:REACT_133391 NextBio:20818406 PMAP-CutDB:P02459
ArrayExpress:P02459 GO:GO:0005585 GO:GO:0060174 GO:GO:0030903
Uniprot:P02459
Length = 1487
Score = 110 (43.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 47/107 (43%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG- 120
G RGP G K PGD E G PG ERGP G + RG PG PG K RG
Sbjct: 237 GPMGPRGPPGPPGK--PGDDGEAGKPGKSGERGPPGPQGARGFPGTPGL--PGVKGHRGY 292
Query: 121 PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 293 PGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 337
Score = 106 (42.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 47/124 (37%), Positives = 53/124 (42%)
Query: 65 PGDKEERGP-GDKEKRG-------PGDKEERG-PG-D--KEERG-PGDREKRG-PGDKEE 110
PG ERGP G + RG PG K RG PG D K E G PG + + G PG E
Sbjct: 260 PGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--EN 317
Query: 111 RGPGDKEKRG-PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
PG RG PG++ + GP G RG G GP G PG K E
Sbjct: 318 GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEA 377
Query: 168 APGG 171
P G
Sbjct: 378 GPTG 381
Score = 104 (41.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 42/114 (36%), Positives = 52/114 (45%)
Query: 73 PGDKEKRGPGDKEERGP-GDKEERGP----GDREKRGP-GDKEERG-PGDKEKRGPGDKE 125
PG GP K+ GP G + + GP GD +GP G E+G PGD GP
Sbjct: 914 PGPPGPPGPSGKD--GPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPP 971
Query: 126 KRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 972 --GPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 1022
Score = 100 (40.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 45/116 (38%), Positives = 50/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 297 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 354
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG P G
Sbjct: 355 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGPRGEPGTPGSPGPAG 405
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 249 GKPGDDGEAGKPGKSGERGPPGPQGARG 276
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 308 KGESGSPGENGSPGPMGPRGLPGERGRTGP 337
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK E+G PG + G PG GP
Sbjct: 131 QGPRGDRG-DKGEKGAPGPRGRDGEPGTPGNPGP 163
Score = 40 (19.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 5 RGERASDKEERGPGDKEERG----PGDKKARGP 33
RGER E PG + +G PG GP
Sbjct: 698 RGERGFPGERGSPGSQGLQGARGLPGTPGTDGP 730
Score = 34 (17.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 147 GPRGRDGEPGTPGNPGPPGP 166
>UNIPROTKB|F1PS24 [details] [associations]
symbol:COL2A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:0071599 "otic vesicle development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] [GO:0060174 "limb bud formation"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0006029 "proteoglycan metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005585 "collagen type II" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] [GO:0001894 "tissue homeostasis"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093
Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51461 SMART:SM00038 SMART:SM00214 GO:GO:0005737
GO:GO:0043066 GO:GO:0005615 GO:GO:0003007 GO:GO:0007601
GO:GO:0030199 GO:GO:0007417 GO:GO:0042472 GO:GO:0001894
GO:GO:0007605 GO:GO:0071773 InterPro:IPR008160 Pfam:PF01391
GO:GO:0071599 GO:GO:0005604 GO:GO:0001502 GO:GO:0060021
GO:GO:0002062 GO:GO:0010468 GO:GO:0060272 GO:GO:0006029
GO:GO:0001958 GO:GO:0060351 GO:GO:0005201
GeneTree:ENSGT00660000095287 GO:GO:0005585 GO:GO:0060174
GO:GO:0030903 EMBL:AAEX03015088 EMBL:AAEX03015089
Ensembl:ENSCAFT00000014414 OMA:CPICPTE Uniprot:F1PS24
Length = 1489
Score = 110 (43.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 47/107 (43%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG- 120
G RGP G K PGD E G PG ERGP G + RG PG PG K RG
Sbjct: 238 GPMGPRGPPGPPGK--PGDDGEAGKPGKSGERGPPGPQGARGFPGTPGL--PGVKGHRGY 293
Query: 121 PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 294 PGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 338
Score = 104 (41.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 42/114 (36%), Positives = 52/114 (45%)
Query: 73 PGDKEKRGPGDKEERGP-GDKEERGP----GDREKRGP-GDKEERG-PGDKEKRGPGDKE 125
PG GP K+ GP G + + GP GD +GP G E+G PGD GP
Sbjct: 916 PGPPGPPGPSGKD--GPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPP 973
Query: 126 KRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 974 --GPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 1024
Score = 103 (41.3 bits), Expect = 0.00073, P = 0.00073
Identities = 42/116 (36%), Positives = 57/116 (49%)
Query: 71 RGPGDKEKRG-PGD-KEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEKRG-PGD 123
R PG K ++G PGD K+ GP G +GP G++ RG GDK E+G PG + + G PG
Sbjct: 99 RQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGT 158
Query: 124 KEKRGP-GDKEERGP----GDKEERGPGDKEERGQGDKE--KRGP-GDKEERAPGG 171
GP G GP G+ + G +E+ G + +GP G R P G
Sbjct: 159 PGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPG 214
Score = 98 (39.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 65 PGDKEERGP-GDKEKRG-------PGDKEERG-PG-D--KEERG-PGDREKRG-PGDKEE 110
PG ERGP G + RG PG K RG PG D K E G PG + + G PG E
Sbjct: 261 PGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--EN 318
Query: 111 RGPGDKEKRG-PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKE-E 166
PG RG PG++ + GP G RG G GP G PG + E
Sbjct: 319 GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVSPAGGPGFPGAPGASQGE 378
Query: 167 RAPGG 171
P G
Sbjct: 379 AGPTG 383
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 250 GKPGDDGEAGKPGKSGERGPPGPQGARG 277
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 309 KGESGSPGENGSPGPMGPRGLPGERGRTGP 338
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK E+G PG + G PG GP
Sbjct: 132 QGPRGDRG-DKGEKGAPGPRGRDGEPGTPGNPGP 164
Score = 40 (19.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RGER E PG + +GP
Sbjct: 700 RGERGFPGERGSPGAQGLQGP 720
Score = 34 (17.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 148 GPRGRDGEPGTPGNPGPPGP 167
>UNIPROTKB|F1P5B5 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OMA:PFENFTL EMBL:AADN02021061 IPI:IPI00591329
Ensembl:ENSGALT00000015499 Uniprot:F1P5B5
Length = 395
Score = 125 (49.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 53/125 (42%), Positives = 64/125 (51%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRG-------PGDKEERG-P 113
PG K E+G D +G PG +GP G K ERG G+R G PG + E G
Sbjct: 50 PGPKGEKG--DAGLQGLPGAPGPQGPKGFKGERGEQGERGTSGSPGYPGKPGLQGEAGVK 107
Query: 114 GDKEKRG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEER 167
G+K G PG K ++G GD E G GDK +RG GD G QGDK ++G GDK
Sbjct: 108 GNKGNYGFPGLKGQKGSKGDTCENGTKGDKGDRGDVGDPGVGGEQGDKGEKGDTGDKGYC 167
Query: 168 A-PGG 171
PGG
Sbjct: 168 GEPGG 172
Score = 123 (48.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 45/118 (38%), Positives = 62/118 (52%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDK----E 117
PG K ++G GD + G GDK +RG D + G G + GDK E+G GDK E
Sbjct: 116 PGLKGQKGSKGDTCENGTKGDKGDRG--DVGDPGVGGEQ----GDKGEKGDTGDKGYCGE 169
Query: 118 KRGPGDKEKRG-PGDKEERGP-GDKEERGPGDKEERGQGDKEKRGP-GDKEERAPGGL 172
G G K +RG G K E+G G+ + G E + QG+K ++G GDK + P G+
Sbjct: 170 PGGRGPKGERGIGGTKGEKGSKGEMGDEGVQGAEGK-QGEKGEQGSKGDKGDLGPAGV 226
Score = 118 (46.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/126 (41%), Positives = 62/126 (49%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG----PGDKE 117
GDK +RG GD G GDK E+G GDK G PG R GP K ERG G+K
Sbjct: 135 GDKGDRGDVGDPGVGGEQGDKGEKGDTGDKGYCGEPGGR---GP--KGERGIGGTKGEKG 189
Query: 118 KRGP-GDKEKRGP----GDKEERGP-GDKEERGP----GDKEERG-QGDKEKRG-PGDKE 165
+G GD+ +G G+K E+G GDK + GP G +G G K RG PG K
Sbjct: 190 SKGEMGDEGVQGAEGKQGEKGEQGSKGDKGDLGPAGVTGPSGPKGVAGSKGGRGAPGRKG 249
Query: 166 ERAPGG 171
R G
Sbjct: 250 ARGAKG 255
Score = 105 (42.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 47/112 (41%), Positives = 52/112 (46%)
Query: 66 GDKEERGP-GDK----EKRGPGDKEERG-PGDKEERGP----GDREKRGP----GDKEER 111
GDK E+G GDK E G G K ERG G K E+G GD +G G+K E+
Sbjct: 153 GDKGEKGDTGDKGYCGEPGGRGPKGERGIGGTKGEKGSKGEMGDEGVQGAEGKQGEKGEQ 212
Query: 112 GP-GDKEKRGP-GDKEKRGP----GDKEERG-PGDKEERGPGDKEERGQGDK 156
G GDK GP G GP G K RG PG K RG K RG K
Sbjct: 213 GSKGDKGDLGPAGVTGPSGPKGVAGSKGGRGAPGRKGARGA--KGARGDAAK 262
Score = 38 (18.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 RGERAS--DKEERGP-GDKEERGP-GDKKARG 32
+G++ S D E G GDK +RG GD G
Sbjct: 119 KGQKGSKGDTCENGTKGDKGDRGDVGDPGVGG 150
>UNIPROTKB|F1LS40 [details] [associations]
symbol:Col1a2 "Collagen alpha-2(I) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:621351 GO:GO:0005615 GO:GO:0030199 GO:GO:0001501
GO:GO:0008217 GO:GO:0007179 GO:GO:0007266 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 GO:GO:0001568 GO:GO:0071230
GO:GO:0005201 GO:GO:0043589 GeneTree:ENSGT00660000095287 KO:K06236
GO:GO:0005584 IPI:IPI00188921 EMBL:AC107447 RefSeq:XP_003749738.1
Ensembl:ENSRNOT00000016423 GeneID:100911218 KEGG:rno:100911218
ArrayExpress:F1LS40 Uniprot:F1LS40
Length = 1372
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 46/120 (38%), Positives = 58/120 (48%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGPGDKEERGP-GDKEKRG 120
G ERG PG+ GP G + ERGP G+ GP G RGP GP G+K + G
Sbjct: 574 GKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGAP--GPDGNKGEAG 631
Query: 121 ----PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRG-PG-DKEERAPGGL 172
PG GPG PG++ G PG K E+G+ G + + G PG D APG +
Sbjct: 632 AVGAPGSAGASGPGGL----PGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAI 687
Score = 108 (43.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 48/120 (40%), Positives = 52/120 (43%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKE-ERG-PGDREKRGP-GDKEERGP-GD 115
PG K ERG PG+ G PG GP K RG PG GP G RGP G
Sbjct: 948 PGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGP 1007
Query: 116 KEKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ RG +K PGDK RG PG K G G G GD+ GP G R P G
Sbjct: 1008 QGIRG----DKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAG 1063
Score = 42 (19.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 2 QACRGERASDKEERGPGDKEERG-PGDK 28
Q +GE + E PG RG PG++
Sbjct: 201 QGVKGEPGAPGENGTPGQAGARGLPGER 228
>UNIPROTKB|Q03692 [details] [associations]
symbol:COL10A1 "Collagen alpha-1(X) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR008983 Reactome:REACT_118779 GO:GO:0005938
GO:GO:0046872 EMBL:CH471051 GO:GO:0030198 GO:GO:0005788
GO:GO:0001501 HOGENOM:HOG000085653 HOVERGEN:HBG108220 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 eggNOG:NOG114228 CTD:1300
OrthoDB:EOG4FFD29 EMBL:X60382 EMBL:X72579 EMBL:X72580 EMBL:X98568
EMBL:AL121963 EMBL:BC130621 EMBL:BC130623 EMBL:X65120 EMBL:X58879
EMBL:M74050 EMBL:S68531 IPI:IPI00011685 PIR:S26396
RefSeq:NP_000484.2 UniGene:Hs.520339 PDB:1GR3 PDBsum:1GR3
ProteinModelPortal:Q03692 SMR:Q03692 MINT:MINT-101719 STRING:Q03692
DMDM:2506306 PaxDb:Q03692 PRIDE:Q03692 Ensembl:ENST00000243222
Ensembl:ENST00000327673 GeneID:1300 KEGG:hsa:1300 UCSC:uc003pwm.3
GeneCards:GC06M116440 HGNC:HGNC:2185 MIM:120110 MIM:156500
neXtProt:NX_Q03692 Orphanet:174 PharmGKB:PA26701 InParanoid:Q03692
OMA:IKGPPPN PhylomeDB:Q03692 EvolutionaryTrace:Q03692
GenomeRNAi:1300 NextBio:5279 ArrayExpress:Q03692 Bgee:Q03692
CleanEx:HS_COL10A1 Genevestigator:Q03692 GermOnline:ENSG00000123500
Uniprot:Q03692
Length = 680
Score = 116 (45.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 47/119 (39%), Positives = 54/119 (45%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP----GDKEERGP-GDREKRGP-GDKEERG-PGDKE 117
PG K ERGP GPG K E+GP G GP G+ +GP G G PG K
Sbjct: 304 PGLKGERGPAGLPG-GPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKG 362
Query: 118 KRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGGL 172
+ GP PG K ERG PG + G PG G +G+ GP GD P GL
Sbjct: 363 ETGPAGPAGY-PGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGL 420
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 46/117 (39%), Positives = 52/117 (44%)
Query: 66 GDKEERG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGPGDKEERG-PGDKE 117
G + E G PG K RG PG E GP G +GP G+R G G G PG +
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPG---EMGPIGPPGPQGPPGERGPEGIGKPGAAGAPG--Q 274
Query: 118 KRGPGDKEKRG-PGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG K G PG GP + G PG K ERG GPG K E+ P GL
Sbjct: 275 PGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPG-GPGAKGEQGPAGL 330
Score = 95 (38.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 44/116 (37%), Positives = 48/116 (41%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG GP G+ +GP G G PG K E GP PG K ERG PG K G
Sbjct: 331 PGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGY-PGAKGERGSPGSDGKPG 389
Query: 121 -PGDKEKRGPGDKEERG-PGDKEERGPGDKEER-GQ-GDKEKRG-PGDKEERAPGG 171
PG GP K G PG K + G G G G +G PG E P G
Sbjct: 390 YPGKPGLDGP--KGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRG 443
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+GER GPG K E+GP
Sbjct: 307 KGERGPAGLPGGPGAKGEQGP 327
Score = 44 (20.5 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 12 KEERGPGDKEERGPGDKKARGP 33
K ERGP GPG K +GP
Sbjct: 307 KGERGPAGLPG-GPGAKGEQGP 327
Score = 35 (17.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 304 PGLKGERGP 312
>MGI|MGI:88447 [details] [associations]
symbol:Col11a2 "collagen, type XI, alpha 2" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001503 "ossification" evidence=ISO] [GO:0001894 "tissue
homeostasis" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IC] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005581 "collagen" evidence=IDA]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO;IMP] [GO:0030199 "collagen fibril
organization" evidence=ISO;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=ISO]
[GO:0060021 "palate development" evidence=ISO] [GO:0060023 "soft
palate development" evidence=ISO] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 MGI:MGI:88447
GO:GO:0046872 GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894 GO:GO:0007605
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0002062
GO:GO:0048705 EMBL:AF100956 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:1302 GO:GO:0060023 EMBL:U16789
EMBL:U16790 EMBL:D38412 EMBL:D84066 IPI:IPI00138069 IPI:IPI00283627
IPI:IPI00283629 IPI:IPI00466773 IPI:IPI00466863 IPI:IPI00469449
IPI:IPI00626876 PIR:A55576 RefSeq:NP_034056.1 UniGene:Mm.20230
ProteinModelPortal:Q64739 SMR:Q64739 STRING:Q64739
PhosphoSite:Q64739 PaxDb:Q64739 PRIDE:Q64739 DNASU:12815
Ensembl:ENSMUST00000087497 Ensembl:ENSMUST00000114252
Ensembl:ENSMUST00000114255 GeneID:12815 KEGG:mmu:12815
UCSC:uc008cbc.1 InParanoid:Q64739 OMA:MQEDEAI OrthoDB:EOG4BRWM8
NextBio:282274 Bgee:Q64739 CleanEx:MM_COL11A2 Genevestigator:Q64739
GermOnline:ENSMUSG00000024330 Uniprot:Q64739
Length = 1736
Score = 116 (45.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPPGPAGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/117 (36%), Positives = 55/117 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PG GP EK PG+ G G+ +GP G+R ++G G E GP G K G
Sbjct: 1200 PGGVGNLGPPG-EKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPKGPTG 1258
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G K GP G + GP G+ RG G K +RG+ G+ + G PG E P G
Sbjct: 1259 DNGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1315
Score = 106 (42.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 44/118 (37%), Positives = 56/118 (47%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEK 118
PG+K E G G +G PG K RG G+K E G G+ GP G + GP G+
Sbjct: 1209 PGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQAGEAGPPGPKGPTGDNGPKGNPGP 1268
Query: 119 RG-PGDKEKRGPGDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
G PGD PG+ RG G K +RG G+ + G G + GP G +R P G
Sbjct: 1269 VGFPGDPGP--PGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAG 1324
Score = 44 (20.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 41 (19.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K +RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGQRG--DTGAQG 580
Score = 38 (18.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 988 GERGLPGTAGGPGLKGNEGP 1007
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1086 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1115
>UNIPROTKB|P49750 [details] [associations]
symbol:YLPM1 "YLP motif-containing protein 1" species:9606
"Homo sapiens" [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0032204 "regulation of telomere maintenance"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR026314 GO:GO:0005634
GO:GO:0006355 GO:GO:0016607 GO:GO:0006351 EMBL:AC007956
EMBL:AK095760 EMBL:L40403 EMBL:L40400 EMBL:BC007792 IPI:IPI00165434
IPI:IPI00514265 IPI:IPI00940874 RefSeq:NP_062535.2
UniGene:Hs.531111 ProteinModelPortal:P49750 SMR:P49750
IntAct:P49750 STRING:P49750 PhosphoSite:P49750 DMDM:57015374
PaxDb:P49750 PRIDE:P49750 Ensembl:ENST00000238571
Ensembl:ENST00000325680 GeneID:56252 KEGG:hsa:56252 UCSC:uc001xqj.4
CTD:56252 GeneCards:GC14P075230 HGNC:HGNC:17798 HPA:HPA048070
neXtProt:NX_P49750 PharmGKB:PA134962086 eggNOG:NOG267915
HOGENOM:HOG000168351 HOVERGEN:HBG079363 InParanoid:P49750
OMA:QSYLAPT ChiTaRS:YLPM1 GenomeRNAi:56252 NextBio:61881
ArrayExpress:P49750 Bgee:P49750 CleanEx:HS_YLPM1
Genevestigator:P49750 GermOnline:ENSG00000119596 PANTHER:PTHR13413
Uniprot:P49750
Length = 1951
Score = 119 (46.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 43/119 (36%), Positives = 53/119 (44%)
Query: 65 PGDKEERGPGD---KEKRGPGDKEERGP---GDKEERGP----GDREKRGP--GDKEERG 112
PG E+ PG + RG ERGP +ERGP G RE+ P ERG
Sbjct: 891 PGSSREKVPGGLQGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERG 950
Query: 113 PGDKEKRGPGDKEKRGPGDKE---ERGPGDKEERGPGDKEERGQGDKEKRGPGDK-EER 167
P RGPG +E RG G + +RGP E G+K D+ R P + EER
Sbjct: 951 P----PRGPGSRE-RGLGRSDFGRDRGPFRPEPGDGGEKMYPYHRDEPPRAPWNHGEER 1004
Score = 113 (44.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/117 (35%), Positives = 54/117 (46%)
Query: 71 RGPGDKEKRGPGDKEERGPGDKEE-RGPGDREK--RGPGDKEERG---PGDKEKRGPGD- 123
RG G RGPG ++ DK R REK RG G ++ RG PG ++ PG
Sbjct: 844 RGRGQAISRGPGLVKQEDFRDKMMGRREDSREKMNRGEGSRD-RGLVRPGSSREKVPGGL 902
Query: 124 --KEKRGPGDKEERGP---GDKEERGP----GDKEE---RGQGDKEK---RGPGDKE 165
+ RG ERGP +ERGP G +E R G +E+ RGPG +E
Sbjct: 903 QGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERGPPRGPGSRE 959
Score = 103 (41.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 34/102 (33%), Positives = 45/102 (44%)
Query: 83 DKEERGPGDKEERGPGDREK----RGPGDKEERGPGDKE--KRGPGDKEKRGPGDKEERG 136
DK P +++ R G+R RGPG DK RG G RGPG ++
Sbjct: 802 DKGLPRPDNRDNRLEGNRGNSSSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQED 861
Query: 137 PGDK---EERGPGDKEERGQGDKEKRG---PGDKEERAPGGL 172
DK +K RG+G ++ RG PG E+ PGGL
Sbjct: 862 FRDKMMGRREDSREKMNRGEGSRD-RGLVRPGSSREKVPGGL 902
Score = 42 (19.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 5 RGERASDKEERGPGDKEERGPG 26
RGE + D+ PG E+ PG
Sbjct: 879 RGEGSRDRGLVRPGSSREKVPG 900
Score = 39 (18.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDK 28
G R + RGPG DK
Sbjct: 817 GNRGNSSSYRGPGQSRMEDTRDK 839
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 5 RGERASDKE--ERGPGDKEERGPG 26
R E DK RG G RGPG
Sbjct: 832 RMEDTRDKGLVNRGRGQAISRGPG 855
Score = 33 (16.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 7 ERASDKEERGPGDKEERGP 25
E SD ++ P + GP
Sbjct: 705 ENLSDSQQEPPKSEVSEGP 723
>WB|WBGene00004264 [details] [associations]
symbol:qua-1 species:6239 "Caenorhabditis elegans"
[GO:0007154 "cell communication" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0060102 "collagen and cuticulin-based cuticle extracellular
matrix" evidence=IDA] InterPro:IPR001657 InterPro:IPR001767
InterPro:IPR006141 Pfam:PF01079 PRINTS:PR00632 PROSITE:PS50817
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0006508 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0008233 GO:GO:0007154 GO:GO:0060102 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
EMBL:Z66500 EMBL:Z49968 PIR:T23754 RefSeq:NP_495725.2 HSSP:Q02936
ProteinModelPortal:G5EC21 SMR:G5EC21 MEROPS:C46.A05
EnsemblMetazoa:T05C12.10 GeneID:174319 KEGG:cel:CELE_T05C12.10
CTD:174319 WormBase:T05C12.10 GeneTree:ENSGT00690000102370
OMA:VIRHDIL NextBio:883508 Uniprot:G5EC21
Length = 1169
Score = 117 (46.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 41/115 (35%), Positives = 48/115 (41%)
Query: 66 GDKEERGPGDKEKRGPGDKEERG---PGDKEERGPGDREKRGPG-----DKEE-RGPGDK 116
GDK+ G G+ G GD G GD G GD + G G DK G G K
Sbjct: 538 GDKDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGDGSDKNSGAGAGTK 597
Query: 117 -EKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
E R GD G GD G GD + G G K G G + +G G+K PG
Sbjct: 598 PENREGGDGNGNGTGD----GNGDGNDNGNGSKG-LGTGSGDGKGEGNKSG-TPG 646
Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/119 (33%), Positives = 46/119 (38%)
Query: 66 GDKEE--RGPGDKEKRGPGDKEERGPGDKEERGPGDREKR----GPGD-----KEERGPG 114
G KE G G + G GD G GD R GD + P D K+E GP
Sbjct: 467 GSKESGNNGKGKGKGSGDGDGNRNGNGDGNGRPKGDGNIKINIHSPDDNDLLEKDENGPN 526
Query: 115 DKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERGQG---DKEKRGPGDKEERAPG 170
K G G+ G GDK+ G G+ G GD G G D G GD E G
Sbjct: 527 GKGGAGNGN----GDGDKDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNG 581
Score = 109 (43.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGP--GDREK--RGPGDKEERGPGDKEKRGP 121
GD++ G G G+ ++ G GD+++ G G +E G G + G GD + G
Sbjct: 434 GDEDGNGKGGNGGNPKGEWDD-GDGDEDDDGTDGGSKESGNNGKGKGKGSGDGDGNRNGN 492
Query: 122 GDKEKRGPGDKEER----GPGD-----KEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
GD R GD + P D K+E GP K G G+ G GDK+ G
Sbjct: 493 GDGNGRPKGDGNIKINIHSPDDNDLLEKDENGPNGKGGAGNGN----GDGDKDNNGKG 546
Score = 104 (41.7 bits), Expect = 0.00022, P = 0.00022
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 66 GDKEERGPGDKEKRGPGDKE-ERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGP--G 122
G+ + + G + +G D+E E GD++ G G G+ ++ G GD++ G G
Sbjct: 409 GNNKNKDNGKGKGKGKNDEEDEEDNGDEDGNGKGGNGGNPKGEWDD-GDGDEDDDGTDGG 467
Query: 123 DKEK--RGPGDKEERGPGDKEERGPGDKEERGQGDKEKR----GPGD-----KEERAPGG 171
KE G G + G GD G GD R +GD + P D K+E P G
Sbjct: 468 SKESGNNGKGKGKGSGDGDGNRNGNGDGNGRPKGDGNIKINIHSPDDNDLLEKDENGPNG 527
Score = 39 (18.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 11 DKEERGPGDK----EERGPGDKKARG 32
+K+E GP K G GDK G
Sbjct: 519 EKDENGPNGKGGAGNGNGDGDKDNNG 544
>UNIPROTKB|Q05623 [details] [associations]
symbol:MYBPH "Myosin-binding protein H" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG056788
EMBL:L05605 IPI:IPI00603655 PIR:A46611 RefSeq:NP_001026199.1
UniGene:Gga.882 ProteinModelPortal:Q05623 SMR:Q05623 PRIDE:Q05623
GeneID:421154 KEGG:gga:421154 CTD:4608 eggNOG:NOG150657
InParanoid:Q05623 NextBio:20823970 GO:GO:0032982 Uniprot:Q05623
Length = 537
Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/96 (30%), Positives = 38/96 (39%)
Query: 78 KRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGP 137
K+ P K+ P K+ P +EK P KE P KE+ P KE+ P KEE P
Sbjct: 11 KKAPAAKKAPAPASKKAPEPAPKEKPAPTPKEGHAPTPKEEHAPPPKEEHAPPPKEEHAP 70
Query: 138 GDKEERGPGDKE----ERGQGDKEKRGPGDKEERAP 169
E P + E+ + P E AP
Sbjct: 71 APAAETPPAPEHPPDAEQPAAPAAEHAPTPTHEAAP 106
Score = 108 (43.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 32/105 (30%), Positives = 39/105 (37%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
P K+ P KEK P KE P KEE P +E+ P KEE P + P +
Sbjct: 22 PASKKAPEPAPKEKPAPTPKEGHAPTPKEEHAPPPKEEHAPPPKEEHAPAPAAETPPAPE 81
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAP 169
P D E+ E P E +E P E AP
Sbjct: 82 H---PPDAEQPA-APAAEHAPTPTHEAAPAHEEGPPPAAPAE-AP 121
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ A ++ P K+ P KKA P
Sbjct: 3 GKTAPAAAKKAPAAKKAPAPASKKAPEP 30
>UNIPROTKB|F1NNK8 [details] [associations]
symbol:COL25A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001540 "beta-amyloid binding" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0008201 "heparin
binding" evidence=IEA] GO:GO:0005615 GO:GO:0005887 GO:GO:0008201
GO:GO:0001540 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063274 OMA:KGTVGDP EMBL:AADN02008752
EMBL:AADN02008753 EMBL:AADN02008754 EMBL:AADN02008755
EMBL:AADN02008756 EMBL:AADN02008757 EMBL:AADN02008758
EMBL:AADN02008759 EMBL:AADN02008760 EMBL:AADN02008761
EMBL:AADN02008762 EMBL:AADN02008763 IPI:IPI00597189
Ensembl:ENSGALT00000017084 Uniprot:F1NNK8
Length = 503
Score = 113 (44.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 46/115 (40%), Positives = 55/115 (47%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGPGDKEERG-PGDKEKRG 120
G+K G GD +RG GD E GP GD E+G PG G+ E G PG K + G
Sbjct: 107 GEKGAAGLKGDPGERGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPG 166
Query: 121 -PGDKEKRGPGDKEERG-PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
PG PG K E G G + E G PG +G D+ + GP K ER GL
Sbjct: 167 LPGLPGL--PGIKGEPGFIGPQGEPGLPGLPGTKG--DRGEAGPPGKGERGETGL 217
Score = 113 (44.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 46/119 (38%), Positives = 56/119 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRG-PGDKEERG----PGDKE 117
GD ERG GD + GP GD E+G PG G+ + G PG K E G PG
Sbjct: 116 GDPGERGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPG 175
Query: 118 KRG-PGDKEKRG-PGDKEERGP-GDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
+G PG +G PG G GD+ E GP K ERG+ G +G G+ R P G
Sbjct: 176 IKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPPGKGERGETGLPGPKGRTGEPGSRGPKG 234
Score = 103 (41.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 45/114 (39%), Positives = 53/114 (46%)
Query: 73 PGDKEKRGP-GDKEERG-PGDKEERG----PGDREKRGP-GDKEERGP-GDKEKRGP-GD 123
PG GP G G PG K G PG R GP G GP GD+ ++G GD
Sbjct: 368 PGPPGPHGPPGPMGPHGLPGPKGASGLDGKPGPRGVDGPVGPHGPAGPKGDRGEKGTVGD 427
Query: 124 KEKRGP-GDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGGL 172
RGP G + G PG GP G+K E G+ G+K RG G+K E GL
Sbjct: 428 PGPRGPYGLPGKDGKPGLDGFPGPRGEKGEIGEKGEKGFRGIKGEKGEPGQPGL 481
Score = 50 (22.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 5 RGERASDKEERGP-GDKEERG-PGDKKA 30
RGE+ D E GP GD E+G PG A
Sbjct: 121 RGEKG-DAGENGPKGDTGEKGDPGSSAA 147
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 11 DKEERGP-GDKEERGP-GDKKARG 32
D ERG GD E GP GD +G
Sbjct: 117 DPGERGEKGDAGENGPKGDTGEKG 140
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 11 DKEERGPGDKEERG----PGDKKARG 32
D+ E GP K ERG PG K G
Sbjct: 200 DRGEAGPPGKGERGETGLPGPKGRTG 225
Score = 39 (18.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 18 GDKEERGPGDKKARG 32
GD+ E GP K RG
Sbjct: 199 GDRGEAGPPGKGERG 213
>UNIPROTKB|P02458 [details] [associations]
symbol:COL2A1 "Collagen alpha-1(II) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0001894
"tissue homeostasis" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0006029
"proteoglycan metabolic process" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IEA] [GO:0010468 "regulation
of gene expression" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0060174 "limb bud formation" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0071599 "otic vesicle development"
evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IMP]
[GO:0048407 "platelet-derived growth factor binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0042802 "identical protein binding"
evidence=NAS] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=TAS]
[GO:0030199 "collagen fibril organization" evidence=IMP]
[GO:0005585 "collagen type II" evidence=IDA] [GO:0030020
"extracellular matrix structural constituent conferring tensile
strength" evidence=IC] InterPro:IPR000885 InterPro:IPR001007
Pfam:PF00093 Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51461 SMART:SM00038 SMART:SM00214
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0043066 GO:GO:0005615 PDB:2FSE PDBsum:2FSE
PDB:2SEB PDBsum:2SEB GO:GO:0046872 GO:GO:0003007 GO:GO:0007601
GO:GO:0030199 GO:GO:0007417 GO:GO:0005788 GO:GO:0042472
GO:GO:0001894 GO:GO:0042802 GO:GO:0007605 GO:GO:0071773
GO:GO:0051216 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0071599 GO:GO:0005604 GO:GO:0001502 GO:GO:0060021
GO:GO:0002062 GO:GO:0010468 GO:GO:0060272 GO:GO:0006029
GO:GO:0001958 GO:GO:0060351 HOVERGEN:HBG004933 KO:K06236
DrugBank:DB00048 GO:GO:0048407 CTD:1280 OMA:SSCRICV GO:GO:0005585
GO:GO:0060174 GO:GO:0030903 OrthoDB:EOG4FTW1C EMBL:X16468
EMBL:L10347 EMBL:BT007205 EMBL:AC004801 EMBL:BC007252 EMBL:BC116449
EMBL:X16711 EMBL:M25730 EMBL:M32168 EMBL:M25655 EMBL:M25656
EMBL:M64345 EMBL:M60299 EMBL:M25698 EMBL:X58709 EMBL:X57010
EMBL:U15195 EMBL:X13783 EMBL:M25728 EMBL:X02371 EMBL:X02372
EMBL:X02373 EMBL:X02374 EMBL:X02375 EMBL:X02376 EMBL:X02377
EMBL:X02378 EMBL:X16158 EMBL:J00116 EMBL:L00977 EMBL:M63281
EMBL:M27468 EMBL:X06268 EMBL:X00339 EMBL:M12048 IPI:IPI00186460
IPI:IPI00748487 IPI:IPI00936892 PIR:A38513 RefSeq:NP_001835.3
RefSeq:NP_149162.2 UniGene:Hs.408182 PDB:1U5M PDBsum:1U5M
ProteinModelPortal:P02458 SMR:P02458 IntAct:P02458
MINT:MINT-6796075 STRING:P02458 PhosphoSite:P02458 DMDM:124056489
PaxDb:P02458 PRIDE:P02458 DNASU:1280 Ensembl:ENST00000337299
Ensembl:ENST00000380518 GeneID:1280 KEGG:hsa:1280 UCSC:uc001rqt.3
UCSC:uc001rqu.3 UCSC:uc001rqv.3 GeneCards:GC12M048266
HGNC:HGNC:2200 HPA:CAB002214 MIM:108300 MIM:120140 MIM:132450
MIM:150600 MIM:151210 MIM:156550 MIM:183900 MIM:184250 MIM:200610
MIM:271700 MIM:604864 MIM:608805 MIM:609162 MIM:609508
neXtProt:NX_P02458 Orphanet:93296 Orphanet:209867 Orphanet:137678
Orphanet:86820 Orphanet:93297 Orphanet:485 Orphanet:2380
Orphanet:93279 Orphanet:166011 Orphanet:1427 Orphanet:85166
Orphanet:93346 Orphanet:94068 Orphanet:93315 Orphanet:1856
Orphanet:90653 PharmGKB:PA26715 ChiTaRS:COL2A1
EvolutionaryTrace:P02458 GenomeRNAi:1280 NextBio:5171
PMAP-CutDB:P02458 Bgee:P02458 Genevestigator:P02458
GermOnline:ENSG00000139219 GO:GO:0030020 Uniprot:P02458
Length = 1487
Score = 109 (43.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 47/107 (43%), Positives = 52/107 (48%)
Query: 66 GDKEERGP-GDKEKRGPGDKEERG-PGDKEERGP-GDREKRG-PGDKEERGPGDKEKRG- 120
G RGP G K PGD E G PG ERGP G + RG PG PG K RG
Sbjct: 237 GPMGPRGPPGPPGK--PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGL--PGVKGHRGY 292
Query: 121 PG-D--KEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRGP 161
PG D K + G PG K E G PG E PG RG G++ + GP
Sbjct: 293 PGLDGAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGP 337
Score = 105 (42.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 47/124 (37%), Positives = 53/124 (42%)
Query: 65 PGDKEERGP-GDKEKRG-------PGDKEERG-PG-D--KEERG-PGDREKRG-PGDKEE 110
PG ERGP G + RG PG K RG PG D K E G PG + + G PG E
Sbjct: 260 PGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG--EN 317
Query: 111 RGPGDKEKRG-PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
PG RG PG++ + GP G RG G GP G PG K E
Sbjct: 318 GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEA 377
Query: 168 APGG 171
P G
Sbjct: 378 GPTG 381
Score = 101 (40.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 43/118 (36%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGP-GDKEERGPGDKEKRGPG 122
PG GP K+ GP G + + GP + PG + GP G+K E PGD GP
Sbjct: 914 PGPPGPPGPSGKD--GPKGARGDSGPPGRAGE-PGLQGPAGPPGEKGE--PGDD---GPS 965
Query: 123 DKE-KRGP-GDKEERG----PGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGLV 173
E GP G +RG PG + ERG PG G+ K+ PG +R P G V
Sbjct: 966 GAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQG-APGASGDRGPPGPV 1022
Score = 100 (40.3 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 45/116 (38%), Positives = 50/116 (43%)
Query: 66 GDKEERG-PGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG----PGDKE 117
G K E G PG K + G PG E PG RG PG+R + GP G RG PG
Sbjct: 297 GAKGEAGAPGVKGESGSPG--ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 354
Query: 118 KRGPGDKEKRGPGDKEERGPGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GP GPG PG K E GP RG +G + RG PG P G
Sbjct: 355 PPGPVGPAG-GPGFPG--APGAKGEAGPTGA--RGPEGAQGPRGEPGTPGSPGPAG 405
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE S E PG RG PG++ GP
Sbjct: 308 KGESGSPGENGSPGPMGPRGLPGERGRTGP 337
Score = 51 (23.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
G+ D E PG ERGP G + ARG
Sbjct: 249 GKPGDDGEAGKPGKAGERGPPGPQGARG 276
Score = 49 (22.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 2 QACRGERASDKEERG-PGDKEERG-PGDKKARGP 33
Q RG+R DK E+G PG + G PG GP
Sbjct: 131 QGPRGDRG-DKGEKGAPGPRGRDGEPGTPGNPGP 163
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 5 RGERASDKEERGPGDKEERGP 25
RGER E PG + +GP
Sbjct: 698 RGERGFPGERGSPGAQGLQGP 718
Score = 37 (18.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 15 RG-PGDKEERGP-GDKKARGP 33
RG PG++ E GP G GP
Sbjct: 818 RGAPGERGETGPPGPAGFAGP 838
Score = 34 (17.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R D E PG+ GP
Sbjct: 147 GPRGRDGEPGTPGNPGPPGP 166
>UNIPROTKB|F1S2T2 [details] [associations]
symbol:F1S2T2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR026314
GO:GO:0005634 OMA:QSYLAPT PANTHER:PTHR13413
GeneTree:ENSGT00440000039837 EMBL:CU468881 EMBL:FP312698
Ensembl:ENSSSCT00000002636 Uniprot:F1S2T2
Length = 1954
Score = 118 (46.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 45/120 (37%), Positives = 61/120 (50%)
Query: 70 ERG---PGDKEKRGPG---DKEERGPGDKEERGPGDR---EKRGPGDKEERGPGDKEKRG 120
ERG PG ++ PG ++RG ERGP R ++RGP R PG +E+
Sbjct: 886 ERGLVRPGSSREKVPGGLQSNQDRGRAGSRERGPPRRAGSQERGP----PRRPGSRERVP 941
Query: 121 P---GDKEK---RGPGDKEERGPGDKE---ERGPGDKEERGQGDKEKRGPGDKEE--RAP 169
P G +E+ RGPG +E RG G + +RGP + E G G EK P ++E RAP
Sbjct: 942 PRRAGSRERGSPRGPGSRE-RGMGRPDFGRDRGPF-RPEPGDGG-EKIYPYHRDEPPRAP 998
Score = 116 (45.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 42/119 (35%), Positives = 54/119 (45%)
Query: 65 PGDKEERGPG---DKEKRGPGDKEERGP---GDKEERGPGDREKRGPGDKEERGP---GD 115
PG E+ PG + RG ERGP +ERGP R PG +E P G
Sbjct: 892 PGSSREKVPGGLQSNQDRGRAGSRERGPPRRAGSQERGP----PRRPGSRERVPPRRAGS 947
Query: 116 KEK---RGPGDKEKRGPGDKE---ERGPGDKEERGPGDKEERGQGDKEKRGPGDK-EER 167
+E+ RGPG +E RG G + +RGP E G+K D+ R P + EER
Sbjct: 948 RERGSPRGPGSRE-RGMGRPDFGRDRGPFRPEPGDGGEKIYPYHRDEPPRAPWNHGEER 1005
Score = 116 (45.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 43/117 (36%), Positives = 54/117 (46%)
Query: 71 RGPGDKEKRGPGDKEERGPGDKEE-RGPGDREK--RGPGDKEERG---PGDKEKRGPG-- 122
RG G RGPG ++ DK R REK RG G +E RG PG ++ PG
Sbjct: 845 RGRGQAISRGPGLVKQEDFRDKMMGRREDSREKMSRGEGSRE-RGLVRPGSSREKVPGGL 903
Query: 123 -DKEKRGPGDKEERGP---GDKEERGP----GDKEE---RGQGDKEK---RGPGDKE 165
+ RG ERGP +ERGP G +E R G +E+ RGPG +E
Sbjct: 904 QSNQDRGRAGSRERGPPRRAGSQERGPPRRPGSRERVPPRRAGSRERGSPRGPGSRE 960
Score = 107 (42.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 37/112 (33%), Positives = 50/112 (44%)
Query: 65 PGDKEERGPGDKEK----RGPGDKEERGPGDKE--ERGPGDREKRGPGDKEERGPGDKEK 118
P +++ R G + RGPG DK RG G RGPG ++ DK
Sbjct: 809 PDNRDNRLEGSRGSSSSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQEDFRDKMM 868
Query: 119 -RGPGDKEK--RGPGDKEERG---PGDKEERGPG---DKEERGQGDKEKRGP 161
R +EK RG G +E RG PG E+ PG ++RG+ +RGP
Sbjct: 869 GRREDSREKMSRGEGSRE-RGLVRPGSSREKVPGGLQSNQDRGRAGSRERGP 919
Score = 105 (42.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 35/102 (34%), Positives = 44/102 (43%)
Query: 83 DKEERGPGDKEERGPGDREK----RGPGDKEERGPGDKE--KRGPGDKEKRGPGDKEERG 136
DK P +++ R G R RGPG DK RG G RGPG ++
Sbjct: 803 DKGLPRPDNRDNRLEGSRGSSSSYRGPGQSRMEDTRDKGLVNRGRGQAISRGPGLVKQED 862
Query: 137 PGDK---EERGPGDKEERGQGDKEKRG---PGDKEERAPGGL 172
DK +K RG+G +E RG PG E+ PGGL
Sbjct: 863 FRDKMMGRREDSREKMSRGEGSRE-RGLVRPGSSREKVPGGL 903
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDK 28
G R S RGPG DK
Sbjct: 818 GSRGSSSSYRGPGQSRMEDTRDK 840
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 5 RGERASDKEERGPGDKEERGPG 26
RGE + ++ PG E+ PG
Sbjct: 880 RGEGSRERGLVRPGSSREKVPG 901
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 5 RGERASDKE--ERGPGDKEERGPG 26
R E DK RG G RGPG
Sbjct: 833 RMEDTRDKGLVNRGRGQAISRGPG 856
Score = 33 (16.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 7 ERASDKEERGPGDKEERGP 25
E SD ++ P + GP
Sbjct: 705 ENLSDSQQEPPKSEVSEGP 723
>UNIPROTKB|E1C989 [details] [associations]
symbol:E1C989 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234
PROSITE:PS50279 SMART:SM00131 SMART:SM00327 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:AADN02000760 EMBL:AADN02000757
EMBL:AADN02000758 EMBL:AADN02000759 IPI:IPI00682836
Ensembl:ENSGALT00000016692 Uniprot:E1C989
Length = 1124
Score = 121 (47.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/102 (40%), Positives = 53/102 (51%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
GDK + G GDK +RG PG K +G K + G E+ PG K E+G E PG
Sbjct: 248 GDKGDPGDAGDKGERGEPGPKGNKGDAQKGDHGEKG-EEGAPGYKGEKGERG-ECGSPGL 305
Query: 124 KEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP 161
K +RG G RGP G + GP G +G QG+K ++GP
Sbjct: 306 KGERGLEGPFGPRGPRGPQGISGPPGQPGLKGIQGNKGEQGP 347
Score = 106 (42.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 45/121 (37%), Positives = 55/121 (45%)
Query: 66 GDKEERG----PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGP-GDKEERG-PG 114
G+K RG G+K GP G+ ERGP G E G + +GP G E G PG
Sbjct: 556 GEKGSRGLTGSKGEKGLAGPKGEPGERGPPGVNGSSIEGPAGPKGDQGPIGPPGEDGFPG 615
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGPGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
GP G+ GP G + E+G G K E GP G G +G K PG K +R
Sbjct: 616 HSIM-GPMGNPGPPGPPGLRGEKGEGHKGEAGPPGPVGPPGPEGPKGVGDPGPKGDRGLT 674
Query: 171 G 171
G
Sbjct: 675 G 675
Score = 106 (42.4 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 43/122 (35%), Positives = 56/122 (45%)
Query: 65 PGDKEERG---PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRG-PGDKEERGP-GDKE 117
PG K +G PG K +RG G K E G RG GD G PGDK + G G+
Sbjct: 467 PGAKGSKGLGLPGLKGQRGERGQKGEPGLPTVGLRGLKGDIGPPGLPGDKGDVGDSGNPG 526
Query: 118 KRGPGDK------EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
K+G G + GP D + GD+ E+G +G+K GP G+ ER P
Sbjct: 527 KKGKGSLIVGRCLAEMGPSDNFPKPNGDQGEKGSRGLTG-SKGEKGLAGPKGEPGERGPP 585
Query: 171 GL 172
G+
Sbjct: 586 GV 587
Score = 49 (22.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 9 ASDKEERG-PGDKEERGPGDKKARG 32
A DK ERG PG K +G K G
Sbjct: 256 AGDKGERGEPGPKGNKGDAQKGDHG 280
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 3 ACRGERASDKEERGPG---DKEERG----PGDKKARG 32
A +G+ EE PG +K ERG PG K RG
Sbjct: 274 AQKGDHGEKGEEGAPGYKGEKGERGECGSPGLKGERG 310
Score = 35 (17.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 14 ERGPGDKEERGPGDKKARG 32
E GP D + GD+ +G
Sbjct: 541 EMGPSDNFPKPNGDQGEKG 559
>RGD|1564680 [details] [associations]
symbol:RGD1564680 "similar to matrilin 2 precursor"
species:10116 "Rattus norvegicus" [GO:0004867 "serine-type
endopeptidase inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 Pfam:PF00014 Pfam:PF00092 PROSITE:PS50234
PROSITE:PS50279 SMART:SM00131 SMART:SM00327 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00530000063022 OrthoDB:EOG42JNR4 IPI:IPI00768586
Ensembl:ENSRNOT00000045270 Uniprot:D3ZN64
Length = 1142
Score = 119 (46.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGP-------GDREKRG----PGDKEERGP 113
PG K ERGP K PGD ++ G+ ERGP GD+ +RG PG K ++GP
Sbjct: 259 PGIKGERGP----KGNPGDAQK---GETGERGPVGIPGYKGDKGERGECGKPGMKGDKGP 311
Query: 114 -GDKEKRGP-GDKEKRG--PGDKEERG-PGDKEERGP----GDKEERGQGDKEKRGPGDK 164
G +GP G ++ G PGD +G G+K E GP G G G + +G +
Sbjct: 312 AGPYGPKGPRGIQQGIGGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIGQQGVKGERGQ 371
Query: 165 EER--APG 170
E R APG
Sbjct: 372 EGRTGAPG 379
Score = 103 (41.3 bits), Expect = 0.00054, P = 0.00054
Identities = 38/89 (42%), Positives = 45/89 (50%)
Query: 86 ERG-PGDKEERGPGDREKRG-PGDKEERGPGDKEKRGPGDKEKRGPGDKEERGP-GDKEE 142
E+G PGD PG G PG K ERGP K PGD +K G+ ERGP G
Sbjct: 243 EKGDPGD-----PGPPGTHGNPGIKGERGP----KGNPGDAQK---GETGERGPVGIPGY 290
Query: 143 RGPGDKEERGQGDKEKRGPGDKEERAPGG 171
+G DK ERG+ K PG K ++ P G
Sbjct: 291 KG--DKGERGECGK----PGMKGDKGPAG 313
Score = 36 (17.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 259 PGIKGERGP 267
>UNIPROTKB|I3L8B2 [details] [associations]
symbol:COL9A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005594 "collagen type IX" evidence=IEA]
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005594
GeneTree:ENSGT00700000104194 EMBL:FP326739
Ensembl:ENSSSCT00000029893 OMA:TGMMGLP Uniprot:I3L8B2
Length = 688
Score = 111 (44.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 65 PGDKEERGP-GDKEKRG----PGDKEERGPGDKEERGPGDREKRGPGDKEERGP-GDKEK 118
PG + E GP G+ +G GD ERGP + PG + ++GP K E+GP G
Sbjct: 365 PGKEGEPGPQGEIGPQGIMGQKGDHGERGPVGQ----PGPQGRQGP--KGEQGPPGIPGP 418
Query: 119 RG-PGDKEKRG-PGDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGG 171
+G PG K +G PG RG GD G PG+K E+G+ + PG K ++ G
Sbjct: 419 QGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGE----PGPKGQQGVRG 471
Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/113 (38%), Positives = 53/113 (46%)
Query: 65 PG-DKEERGPGDKEKRGPGDKEERGPGDKEERG----PGDR-EKRGPGDKEERGP-GDKE 117
PG D ++ PG +G + R PG+ +G PG K GPGDK E G G
Sbjct: 302 PGIDGKDGTPGTPGMKGSAGQAGR-PGNPGHQGLAGMPGQPGTKGGPGDKGEPGQRGFPG 360
Query: 118 KRGPGDKEKRGPGDKEERGP-------GDKEERGP-GDKEERG-QGDKEKRGP 161
GP KE PG + E GP GD ERGP G +G QG K ++GP
Sbjct: 361 VSGPPGKEGE-PGPQGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGP 412
Score = 109 (43.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 44/123 (35%), Positives = 56/123 (45%)
Query: 65 PGDKEERGPGDK--EKRGPGDKEERGP----GDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG++ RGP + EK G + RGP G K GP G K G PG +G +
Sbjct: 263 PGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATGPPGIDGKDGTPGTPGMKGSAGQ 322
Query: 117 EKR--GPGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPG 170
R PG + G PG +G PGDK E PG + G G K G PG + E P
Sbjct: 323 AGRPGNPGHQGLAGMPGQPGTKGGPGDKGE--PGQRGFPGVSGPPGKEGEPGPQGEIGPQ 380
Query: 171 GLV 173
G++
Sbjct: 381 GIM 383
Score = 39 (18.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 16 GPGDKEERGP-GDKKARGP 33
GPGDK E G G GP
Sbjct: 346 GPGDKGEPGQRGFPGVSGP 364
>RGD|1307029 [details] [associations]
symbol:Col9a2 "collagen, type IX, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005594 "collagen
type IX" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] RGD:1307029 InterPro:IPR008160 Pfam:PF01391 KO:K08131
GO:GO:0005594 CTD:1298 OMA:TSDQHIV OrthoDB:EOG46T324 EMBL:CH473968
GeneTree:ENSGT00700000104194 IPI:IPI00564101 RefSeq:NP_001102145.1
UniGene:Rn.39126 Ensembl:ENSRNOT00000048506 GeneID:362584
KEGG:rno:362584 UCSC:RGD:1307029 NextBio:680451 Uniprot:D3ZNT5
Length = 688
Score = 127 (49.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 49/122 (40%), Positives = 60/122 (49%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERGPGDKEERGPGDREKRGP-------GDKEERGP-GD 115
PG K GPGDK + G G GP KE PG R + GP GD+ ERGP G
Sbjct: 341 PGTKG--GPGDKGEPGQQGFPGISGPPGKEGE-PGPRGETGPQGIMGEKGDQGERGPVGQ 397
Query: 116 KEKRG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDKEERGQ-GDKEKRG-PGDKEERAP 169
+G G K ++G PG +G PG K ++G PG RG GD G PG+K E+
Sbjct: 398 PGPQGRQGPKGEQGSPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGL 457
Query: 170 GG 171
G
Sbjct: 458 SG 459
Score = 109 (43.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 44/123 (35%), Positives = 56/123 (45%)
Query: 65 PGDKEERGPGDK--EKRGPGDKEERGP----GDKEERGP-GDREKRG-PGDKEERGPGDK 116
PG++ RGP + EK G + RGP G K GP G K G PG +G +
Sbjct: 263 PGEEGPRGPPGRAGEKGDVGSQGARGPQGITGPKGTTGPPGIDGKDGTPGIPGMKGSAGQ 322
Query: 117 EKR--GPGDKEKRG-PGDKEERG-PGDKEERGPGDKEERG-QGDKEKRG-PGDKEERAPG 170
R PG + G PG +G PGDK E PG + G G K G PG + E P
Sbjct: 323 VGRPGSPGHQGLAGVPGQPGTKGGPGDKGE--PGQQGFPGISGPPGKEGEPGPRGETGPQ 380
Query: 171 GLV 173
G++
Sbjct: 381 GIM 383
Score = 108 (43.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/115 (38%), Positives = 54/115 (46%)
Query: 65 PG-DKEERGPGDKEKRGPGDKEERGPGDKEERG----PGDR-EKRGPGDKEERGP-GDKE 117
PG D ++ PG +G + R PG +G PG K GPGDK E G G
Sbjct: 302 PGIDGKDGTPGIPGMKGSAGQVGR-PGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPG 360
Query: 118 KRGPGDKEKRGPGDKEERGP-------GDKEERGP-GDKEERG-QGDKEKRG-PG 162
GP KE PG + E GP GD+ ERGP G +G QG K ++G PG
Sbjct: 361 ISGPPGKEGE-PGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQGSPG 414
>UNIPROTKB|E1C4H5 [details] [associations]
symbol:E1C4H5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
SMART:SM00131 SMART:SM00327 GO:GO:0004867 Gene3D:4.10.410.10
InterPro:IPR020901 SUPFAM:SSF57362 PROSITE:PS00280
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00530000063022 OMA:DPNFEIF EMBL:AADN02000760
EMBL:AADN02000757 EMBL:AADN02000758 EMBL:AADN02000759
IPI:IPI00592856 Ensembl:ENSGALT00000017322 Uniprot:E1C4H5
Length = 1147
Score = 121 (47.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/102 (40%), Positives = 53/102 (51%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
GDK + G GDK +RG PG K +G K + G E+ PG K E+G E PG
Sbjct: 249 GDKGDPGDAGDKGERGEPGPKGNKGDAQKGDHGEKG-EEGAPGYKGEKGERG-ECGSPGL 306
Query: 124 KEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP 161
K +RG G RGP G + GP G +G QG+K ++GP
Sbjct: 307 KGERGLEGPFGPRGPRGPQGISGPPGQPGLKGIQGNKGEQGP 348
Score = 106 (42.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 45/121 (37%), Positives = 55/121 (45%)
Query: 66 GDKEERG----PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGP-GDKEERG-PG 114
G+K RG G+K GP G+ ERGP G E G + +GP G E G PG
Sbjct: 557 GEKGSRGLTGSKGEKGLAGPKGEPGERGPPGVNGSSIEGPAGPKGDQGPIGPPGEDGFPG 616
Query: 115 DKEKRGP-GDKEKRGP-GDKEERGPGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
GP G+ GP G + E+G G K E GP G G +G K PG K +R
Sbjct: 617 HSIM-GPMGNPGPPGPPGLRGEKGEGHKGEAGPPGPVGPPGPEGPKGVGDPGPKGDRGLT 675
Query: 171 G 171
G
Sbjct: 676 G 676
Score = 106 (42.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 43/122 (35%), Positives = 56/122 (45%)
Query: 65 PGDKEERG---PGDKEKRGP-GDKEERGPGDKEERG-PGDREKRG-PGDKEERGP-GDKE 117
PG K +G PG K +RG G K E G RG GD G PGDK + G G+
Sbjct: 468 PGAKGSKGLGLPGLKGQRGERGQKGEPGLPTVGLRGLKGDIGPPGLPGDKGDVGDSGNPG 527
Query: 118 KRGPGDK------EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGP-GDKEERAPG 170
K+G G + GP D + GD+ E+G +G+K GP G+ ER P
Sbjct: 528 KKGKGSLIVGRCLAEMGPSDNFPKPNGDQGEKGSRGLTG-SKGEKGLAGPKGEPGERGPP 586
Query: 171 GL 172
G+
Sbjct: 587 GV 588
Score = 49 (22.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 9 ASDKEERG-PGDKEERGPGDKKARG 32
A DK ERG PG K +G K G
Sbjct: 257 AGDKGERGEPGPKGNKGDAQKGDHG 281
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 3 ACRGERASDKEERGPG---DKEERG----PGDKKARG 32
A +G+ EE PG +K ERG PG K RG
Sbjct: 275 AQKGDHGEKGEEGAPGYKGEKGERGECGSPGLKGERG 311
Score = 35 (17.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 14 ERGPGDKEERGPGDKKARG 32
E GP D + GD+ +G
Sbjct: 542 EMGPSDNFPKPNGDQGEKG 560
>UNIPROTKB|H0YHY3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0YHY3 Ensembl:ENST00000548137 Bgee:H0YHY3
Uniprot:H0YHY3
Length = 1602
Score = 114 (45.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 685 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 742
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 743 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 786
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1066 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1122
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1123 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1181
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1087 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1143
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1144 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1200
Score = 102 (41.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1027 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1086
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1087 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1146
Query: 170 GG 171
GG
Sbjct: 1147 GG 1148
Score = 102 (41.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 583 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 642
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 643 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 702
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 703 RGERGPTG 710
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 621 DRGEVGVPGSRGEDGPEGPKGRTGP 645
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 421 KGDRGFDGLPGLPGEKGHRG--DTGAQG 446
Score = 38 (18.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 854 GERGLPGTAGGPGLKGNEGP 873
Score = 37 (18.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 952 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 981
>UNIPROTKB|F1PQD5 [details] [associations]
symbol:COL11A2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0001894
"tissue homeostasis" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894 GO:GO:0007605
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00282 GO:GO:0002062 GO:GO:0048705 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
GO:GO:0060023 OMA:MQEDEAI EMBL:AAEX03008236 EMBL:AAEX03008237
Ensembl:ENSCAFT00000001409 Uniprot:F1PQD5
Length = 1615
Score = 114 (45.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 716 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 773
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 774 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 817
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/117 (36%), Positives = 55/117 (47%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PG GP EK PG+ G G+ +GP G+R ++G G E GP G K G
Sbjct: 1097 PGGVGNLGPPG-EKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTG 1155
Query: 121 P-GDKEKRGP-GDKEERGP-GDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G K GP G + GP G+ RG G K +RG+ G+ + G PG E P G
Sbjct: 1156 DDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1212
Score = 105 (42.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 49/124 (39%), Positives = 58/124 (46%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGP----GDKEERG-PGD 115
PG+K E G G +G PG K RG G+K E G PG+ GP GD +G PG
Sbjct: 1106 PGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPGP 1165
Query: 116 KEKRG-PGDKEKRGP----GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRG-PGDKEE 166
G PG + GP G K +RG G+ + G PG E G G KRG PG
Sbjct: 1166 VGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGDPG--AV 1223
Query: 167 RAPG 170
APG
Sbjct: 1224 GAPG 1227
Score = 104 (41.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 614 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGR 673
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 674 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 733
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 734 RGERGPTG 741
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1058 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1117
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1118 PGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1177
Query: 170 GG 171
GG
Sbjct: 1178 GG 1179
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 652 DRGEVGVPGSRGEDGPEGPKGRTGP 676
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 467 KGDRGFDGLPGLPGEKGHRG--DTGAQG 492
Score = 38 (18.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 983 KGE-VGDPGQKGTKGNKGEHGPPGPPGPLGP 1012
>UNIPROTKB|G3MZI7 [details] [associations]
symbol:Bt.112252 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051128 "regulation of cellular component
organization" evidence=IEA] [GO:0048592 "eye morphogenesis"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0045112 "integrin biosynthetic process"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043394 "proteoglycan binding" evidence=IEA] [GO:0043206
"extracellular fibril organization" evidence=IEA] [GO:0035313
"wound healing, spreading of epidermal cells" evidence=IEA]
[GO:0032964 "collagen biosynthetic process" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005588 "collagen type V" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 GO:GO:0043588 GO:GO:0003007 GO:GO:0030199
GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035313 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 GO:GO:0001568 GO:GO:0005604
GO:GO:0032964 GO:GO:0043206 Pfam:PF02210 GO:GO:0005201
GO:GO:0048592 OMA:TIYEGIG GO:GO:0005588 GO:GO:0045112 GO:GO:0051128
SMART:SM00210 GeneTree:ENSGT00700000104155 EMBL:DAAA02032454
EMBL:DAAA02032455 EMBL:DAAA02032456 EMBL:DAAA02032457
EMBL:DAAA02032458 EMBL:DAAA02032459 EMBL:DAAA02032460
EMBL:DAAA02032461 EMBL:DAAA02032462 EMBL:DAAA02032463
EMBL:DAAA02032464 EMBL:DAAA02032465 EMBL:DAAA02032466
EMBL:DAAA02032467 EMBL:DAAA02032468 Ensembl:ENSBTAT00000063052
Uniprot:G3MZI7
Length = 2021
Score = 112 (44.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 45/124 (36%), Positives = 60/124 (48%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1241 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1298
Query: 117 -EKRGPGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
EK PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1299 GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1358
Query: 168 APGG 171
P G
Sbjct: 1359 GPPG 1362
Score = 112 (44.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 1088 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 1147
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 1148 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1203
Score = 112 (44.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 47/127 (37%), Positives = 61/127 (48%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERGP-GDKEKR 119
PG + +G G + +G G+K E G PG K + G GDR + GP E GP G K +
Sbjct: 972 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPGEDGPEGPKGRG 1031
Query: 120 GP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGDK 164
GP GD GP G+K + G PG +GP G G G+K RG PG +
Sbjct: 1032 GPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPR 1091
Query: 165 EERAPGG 171
+R P G
Sbjct: 1092 GQRGPTG 1098
Score = 111 (44.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 45/119 (37%), Positives = 57/119 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG GP G K GP G+K +GP G + G PG R +G G + +G G+K +
Sbjct: 936 PGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGE 995
Query: 119 RG-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERG--QGDKEKRGP-GDKEERAPGGL 172
G PG K G GD+ E GP E GP + RG GD GP G+K + GL
Sbjct: 996 DGFPGFKGDMGIKGDRGEIGPPGPGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGL 1054
Score = 48 (22.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 1077 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 1105
Score = 47 (21.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PG+K RG PG GP
Sbjct: 810 KGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 839
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 945 PGHPGKEGPPGEKGGQGP 962
Score = 33 (16.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 938 MPGADGPPGHPGKEGPPGEKGGQGP 962
>ZFIN|ZDB-GENE-000208-23 [details] [associations]
symbol:col11a2 "collagen type XI alpha-2"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-000208-23 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 SMART:SM00210
GeneTree:ENSGT00700000104155 GO:GO:0060536 EMBL:FP017221
EMBL:FP085392 IPI:IPI00999186 Ensembl:ENSDART00000105754
ArrayExpress:F1R4X4 Bgee:F1R4X4 Uniprot:F1R4X4
Length = 2021
Score = 112 (44.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 45/117 (38%), Positives = 55/117 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDK--EK 118
PG+ RG G K RG G++ E G PG E GP G KRGP RGP + EK
Sbjct: 1524 PGEVGPRGQDGAKGDRGEDGEQGEAGSPGPTGENGPPGPPGKRGPAGT--RGPEGRQGEK 1581
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAPGG 171
GD GP K GP G + + G PG + RG G ++G PG + P G
Sbjct: 1582 GSKGDSGALGPPGKT--GPVGPQGQPGKPGTEGLRGLPGTVGEQGSPGAAGPKGPPG 1636
Score = 107 (42.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/120 (35%), Positives = 57/120 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEER-GP-GDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG E+G PG+ G G + + GP G++ E+G + PG +GP GD +G
Sbjct: 1452 PGPIGEKGEPGESGPPGVGGEPGKLGPRGERGEKGESGQPGT-PGPPGGKGPTGDDGPKG 1510
Query: 121 -PGDKEKRG-PGDKEERGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG G PG E GP G K +RG G++ E G G + GP G +R P G
Sbjct: 1511 NPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEQGEAGSPGPTGENGPPGPPGKRGPAG 1570
Score = 48 (22.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+G+R D PGDK RG PG GP
Sbjct: 801 KGDRGFDGLPGLPGDKGYRGQPGGMGPPGP 830
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 12 KEERG----PGDKEERGPGDKKAR-GP 33
K ERG PG + E GP K R GP
Sbjct: 999 KGERGEVGVPGPRGEDGPEGPKGRVGP 1025
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGE+ + PG +GP GD +G
Sbjct: 1482 RGEKGESGQPGTPGPPGGKGPTGDDGPKG 1510
Score = 34 (17.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 18 GDKEERGPGDK 28
GD ERGP K
Sbjct: 669 GDPGERGPTGK 679
>UNIPROTKB|H0Y6C5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0Y6C5 Ensembl:ENST00000443138 Uniprot:H0Y6C5
Length = 1623
Score = 114 (45.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 706 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 763
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 764 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 807
Score = 109 (43.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1087 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1143
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1144 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1202
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1108 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1164
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1165 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1221
Score = 102 (41.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1048 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1107
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1108 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1167
Query: 170 GG 171
GG
Sbjct: 1168 GG 1169
Score = 102 (41.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 604 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 663
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 664 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 723
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 724 RGERGPTG 731
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 642 DRGEVGVPGSRGEDGPEGPKGRTGP 666
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 442 KGDRGFDGLPGLPGEKGHRG--DTGAQG 467
Score = 38 (18.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 875 GERGLPGTAGGPGLKGNEGP 894
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 973 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1002
>UNIPROTKB|F1S2C1 [details] [associations]
symbol:LOC100520915 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
OMA:MQEDEAI EMBL:CT737383 Ensembl:ENSSSCT00000001640
ArrayExpress:F1S2C1 Uniprot:F1S2C1
Length = 1618
Score = 112 (44.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 48/128 (37%), Positives = 62/128 (48%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 616 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGR 675
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG PG
Sbjct: 676 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKPGP 735
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 736 RGERGPTG 743
Score = 107 (42.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 44/116 (37%), Positives = 56/116 (48%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGPGDKEERGP-GDKEKR 119
PG+K E G G +G PG K RG G+K E G PG+ GP +GP GD +
Sbjct: 1108 PGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEVGPPGP-----KGPTGDDGPK 1162
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G PG G PG E GP ++ G K +RG+ G+ + G PG E P G
Sbjct: 1163 GNPGPVGFPGDPGPPGEAGPRGQD----GAKGDRGEDGEPGQPGSPGPTGENGPPG 1214
Score = 107 (42.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/117 (36%), Positives = 56/117 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEK 118
PG + ERGP G + +RGP G + G G GP G +RG PG + G PG K
Sbjct: 733 PGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGP 792
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 793 PGPPGKDGL-PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPG 848
Score = 100 (40.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 44/119 (36%), Positives = 58/119 (48%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEK 118
PG + GP G +GP G GP G+K E G G +G PG K RG G+K +
Sbjct: 1081 PGPRGPAGPNGADGPQGPSGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1140
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERAPG 170
G PG+ GP G + GP G+ G PGD G+ G + + G GD+ E+ PG
Sbjct: 1141 SGQPGEVGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPG 1199
Score = 51 (23.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + ERGP G + RGP
Sbjct: 722 GEKGARGLSGKPGPRGERGPTGPRGQRGP 750
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 654 DRGEVGVPGSRGEDGPEGPKGRTGP 678
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 469 KGDRGFDGLPGLPGEKGHRG--DTGAQG 494
Score = 38 (18.4 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 887 GERGLPGTAGGPGLKGNEGP 906
Score = 38 (18.4 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ G+K E GP G GP
Sbjct: 985 KGEVGDPGQKGAKGNKGEHGPPGPPGPLGP 1014
>UNIPROTKB|E7EMX6 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI00894004 ProteinModelPortal:E7EMX6 Ensembl:ENST00000552134
ArrayExpress:E7EMX6 Uniprot:E7EMX6
Length = 1629
Score = 114 (45.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 712 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 769
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 770 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 813
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1093 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1149
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1150 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1208
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1114 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1170
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1171 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1227
Score = 102 (41.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1054 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1113
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1114 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1173
Query: 170 GG 171
GG
Sbjct: 1174 GG 1175
Score = 102 (41.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 610 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 669
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 670 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 729
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 730 RGERGPTG 737
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 648 DRGEVGVPGSRGEDGPEGPKGRTGP 672
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 448 KGDRGFDGLPGLPGEKGHRG--DTGAQG 473
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 881 GERGLPGTAGGPGLKGNEGP 900
Score = 37 (18.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 979 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1008
>UNIPROTKB|H0YIS1 [details] [associations]
symbol:COL11A2 "Collagen, type XI, alpha 2, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 EMBL:CH471081 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 KO:K06236 SMART:SM00210 CTD:1302
EMBL:AL645940 EMBL:AL844527 EMBL:AL845446 EMBL:CR759733
EMBL:CR936877 UniGene:Hs.390171 GeneID:1302 KEGG:hsa:1302
HGNC:HGNC:2187 GenomeRNAi:1302 RefSeq:NP_542410.2
Ensembl:ENST00000361917 Ensembl:ENST00000549491
Ensembl:ENST00000550998 Ensembl:ENST00000552473 Uniprot:H0YIS1
Length = 1629
Score = 114 (45.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 712 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 769
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 770 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 813
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1093 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1149
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1150 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1208
Score = 103 (41.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1114 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1170
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1171 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1227
Score = 102 (41.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1054 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1113
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1114 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1173
Query: 170 GG 171
GG
Sbjct: 1174 GG 1175
Score = 102 (41.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 610 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 669
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 670 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 729
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 730 RGERGPTG 737
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 648 DRGEVGVPGSRGEDGPEGPKGRTGP 672
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 448 KGDRGFDGLPGLPGEKGHRG--DTGAQG 473
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 881 GERGLPGTAGGPGLKGNEGP 900
Score = 37 (18.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 979 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1008
>UNIPROTKB|Q86Y22 [details] [associations]
symbol:COL23A1 "Collagen alpha-1(XXIII) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005788 "endoplasmic reticulum lumen"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0030198 "extracellular matrix organization" evidence=TAS]
Reactome:REACT_118779 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576
GO:GO:0005615 GO:GO:0009986 GO:GO:0030198 GO:GO:0008201
GO:GO:0005788 HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0070207 HOVERGEN:HBG004933 EMBL:AY158895
EMBL:AY898961 EMBL:BC042428 EMBL:AL137461 IPI:IPI00217102
IPI:IPI00251596 PIR:T46404 RefSeq:NP_775736.2 UniGene:Hs.660026
ProteinModelPortal:Q86Y22 SMR:Q86Y22 IntAct:Q86Y22 STRING:Q86Y22
PhosphoSite:Q86Y22 DMDM:74723551 PaxDb:Q86Y22 PRIDE:Q86Y22
Ensembl:ENST00000390654 Ensembl:ENST00000407622 GeneID:91522
KEGG:hsa:91522 UCSC:uc021yiy.1 CTD:91522 GeneCards:GC05M177664
HGNC:HGNC:22990 MIM:610043 neXtProt:NX_Q86Y22 PharmGKB:PA134899251
eggNOG:NOG320189 InParanoid:Q86Y22 OMA:IPGRKGV OrthoDB:EOG4N5VZ2
PhylomeDB:Q86Y22 GenomeRNAi:91522 NextBio:77272 Bgee:Q86Y22
CleanEx:HS_COL23A1 Genevestigator:Q86Y22 GermOnline:ENSG00000050767
Uniprot:Q86Y22
Length = 540
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 43/107 (40%), Positives = 50/107 (46%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG RGP GD K GP + +GP G K E G G+ +GP G K E G PG K
Sbjct: 189 PGPPGARGPPGDTGKDGP--RGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDD 246
Query: 120 G-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGP 161
G P GP G+ GP G+ G PG K E G +G GP
Sbjct: 247 GTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGP 293
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 44/115 (38%), Positives = 54/115 (46%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGPGDKEERGPGDREKRGP-GDKEERGPGDKEKRGP 121
PG K E+G PGD RG G GP PG RGP GD + GP + +GP
Sbjct: 159 PGPKGEKGAPGDFGPRGDQGQDGAAGPPGP----PGPPGARGPPGDTGKDGP--RGAQGP 212
Query: 122 -GDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQGDKEKRGPGDKEERAPGGL 172
G K + G G+ +GP G K E G PG K + G + PG K E PG +
Sbjct: 213 AGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGT-PSQPGPPGPKGE--PGSM 264
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 45/121 (37%), Positives = 61/121 (50%)
Query: 65 PGDKEERGP-GDKEKRGP----GDKEERGP-GDKEERG-PGDREKRG----PGDKEERG- 112
PG GP G + +GP G K E+G G++ G PG G PG K E+G
Sbjct: 414 PGPPGPPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGR 473
Query: 113 PGDKEKRG-PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAPG 170
PG+ G PG + ++G D+ ERG +K ERG PG K +GQ K + GP ++ P
Sbjct: 474 PGEPGLDGFPGPRGEKG--DRSERG--EKGERGVPGRKGVKGQ--KGEPGPPGLDQPCPV 527
Query: 171 G 171
G
Sbjct: 528 G 528
Score = 37 (18.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA 30
GERA + G G+ G G + A
Sbjct: 4 GERAGGGGDAGKGNAAGGGGGGRSA 28
>MGI|MGI:88457 [details] [associations]
symbol:Col5a1 "collagen, type V, alpha 1" species:10090 "Mus
musculus" [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0003007 "heart morphogenesis" evidence=IGI] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005581 "collagen"
evidence=IMP;IDA] [GO:0005588 "collagen type V" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=ISO] [GO:0008201 "heparin binding" evidence=ISO]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030199 "collagen
fibril organization" evidence=ISO;IGI;IMP] [GO:0031012
"extracellular matrix" evidence=ISO;IDA] [GO:0032964 "collagen
biosynthetic process" evidence=ISO] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=ISO] [GO:0035989 "tendon
development" evidence=IGI;IMP] [GO:0043206 "extracellular fibril
organization" evidence=ISO] [GO:0043394 "proteoglycan binding"
evidence=ISO] [GO:0043588 "skin development" evidence=ISO;IMP]
[GO:0045112 "integrin biosynthetic process" evidence=ISO]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0048592 "eye morphogenesis" evidence=ISO] [GO:0051128
"regulation of cellular component organization" evidence=IMP]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 MGI:MGI:88457 GO:GO:0043588 GO:GO:0003007
GO:GO:0030199 GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035313
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0001568
GO:GO:0005604 GO:GO:0032964 GO:GO:0043206 Pfam:PF02210
GO:GO:0005201 GO:GO:0048592 HOGENOM:HOG000085654 HOVERGEN:HBG004933
KO:K06236 CTD:1289 OMA:TIYEGIG OrthoDB:EOG49GKHM GO:GO:0005588
GO:GO:0045112 GO:GO:0051128 SMART:SM00210 EMBL:AB009993
EMBL:AL731778 EMBL:AL732513 EMBL:AB098608 EMBL:AK148055
IPI:IPI00128689 RefSeq:NP_056549.2 UniGene:Mm.7281
ProteinModelPortal:O88207 SMR:O88207 IntAct:O88207 STRING:O88207
PhosphoSite:O88207 PaxDb:O88207 PRIDE:O88207
Ensembl:ENSMUST00000028280 GeneID:12831 KEGG:mmu:12831
GeneTree:ENSGT00700000104155 InParanoid:O88207 NextBio:282334
Bgee:O88207 CleanEx:MM_COL5A1 Genevestigator:O88207
GermOnline:ENSMUSG00000026837 Uniprot:O88207
Length = 1838
Score = 114 (45.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 789 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 848
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 849 GGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 908
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 909 RGQRGPTG 916
Score = 112 (44.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 906 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 965
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 966 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1021
Score = 111 (44.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 44/124 (35%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1059 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1116
Query: 117 EKRG-PGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
++G PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1117 GEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1176
Query: 168 APGG 171
P G
Sbjct: 1177 GPPG 1180
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1323 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1379
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1432
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 39/103 (37%), Positives = 50/103 (48%)
Query: 73 PGDKEKRGP-GDKEERG-PGDKEERGPGDREK-RGP----GDKEERGP----GDKEKRG- 120
PG +GP G E+G PG+K +GP R+ +GP G GP GDK + G
Sbjct: 1104 PGRPGPQGPPGPAGEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGE 1163
Query: 121 PGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG 160
PG K +G DK E+GP G +GP G G G+ RG
Sbjct: 1164 PGQKGSKG--DKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRG 1204
Score = 48 (22.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 895 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 923
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1158 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1187
Score = 45 (20.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 827 DRGEIGPPGPRGEDGPEGPKGRG 849
Score = 42 (19.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARG 32
GE+ E PG E GP G K RG
Sbjct: 1282 GEKGEPGEAGDPGLPGEGGPLGPKGERG 1309
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 627 KGDRGFDGLAGLPGEKGHRGDPG 649
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 762 PGHPGKEGPPGEKGGQGP 779
Score = 33 (16.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 755 MPGADGPPGHPGKEGPPGEKGGQGP 779
>ZFIN|ZDB-GENE-060503-350 [details] [associations]
symbol:ppp1r18 "protein phosphatase 1, regulatory
subunit 18" species:7955 "Danio rerio" [GO:0019902 "phosphatase
binding" evidence=IEA] InterPro:IPR025907 Pfam:PF13914
ZFIN:ZDB-GENE-060503-350 EMBL:CR391989 CTD:170954 eggNOG:NOG135687
OrthoDB:EOG49KFQG InterPro:IPR026671 PANTHER:PTHR21685
GeneTree:ENSGT00530000064035 IPI:IPI00613114 RefSeq:XP_698574.2
UniGene:Dr.87854 Ensembl:ENSDART00000105213
Ensembl:ENSDART00000142287 GeneID:570052 KEGG:dre:570052
NextBio:20889964 Uniprot:F1Q9G4
Length = 1319
Score = 109 (43.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 68 KEERGPGDKEKRGPGDKE-ERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
K + G K +RG G++ ERG G EE G + +R D+E G EKRG ++
Sbjct: 229 KRDGESGGKMERGRGEERIERGRG--EEIGVSEERRR---DEESLEKGRGEKRGISEEGW 283
Query: 127 RGPGDKE---ERGPGDKE-ERGPGDKEERGQGDKEKR 159
RG G E E+G G++ ER G EERG+ ++ +R
Sbjct: 284 RGKGRGEDWIEKGRGEERIERRRG--EERGRSEERRR 318
Score = 107 (42.7 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 41/111 (36%), Positives = 58/111 (52%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKE---ERGPGD-REKRGPGDKEERGPGDKEKRGPG 122
D+E G EKRG ++ RG G E E+G G+ R +R G EERG ++ +R
Sbjct: 264 DEESLEKGRGEKRGISEEGWRGKGRGEDWIEKGRGEERIERRRG--EERGRSEERRRCEE 321
Query: 123 DKEK-RGP--GDKEERGPGDKEERGP--GDKEERGQGDKEKRGPGDKEERA 168
EK RG G EER G + RG G EER +G E++G ++ +R+
Sbjct: 322 SLEKVRGEKRGISEERLKGQERWRGEEKGISEERRRG--EEQGISEQRKRS 370
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 8 RASDKEERGPGDKEERGPG-DKKARGP 33
R D+E + G ++ER G + K GP
Sbjct: 131 RGRDRESKNEGREQERSTGREGKETGP 157
Score = 36 (17.7 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 12 KEERGPGDKEERGPGDKKA-RG 32
K + G K ERG G+++ RG
Sbjct: 229 KRDGESGGKMERGRGEERIERG 250
>UNIPROTKB|B0UXE9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 HOVERGEN:HBG004933 SMART:SM00210 HGNC:HGNC:2187
OrthoDB:EOG4BRWM8 EMBL:CR354565 IPI:IPI01021833
Ensembl:ENST00000425729 Uniprot:B0UXE9
Length = 1650
Score = 114 (45.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 733 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 790
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 791 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 834
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1114 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1170
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1171 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1229
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1135 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1191
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1192 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1248
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1075 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1134
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1135 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1194
Query: 170 GG 171
GG
Sbjct: 1195 GG 1196
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 631 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 690
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 691 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 750
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 751 RGERGPTG 758
Score = 44 (20.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 669 DRGEVGVPGSRGEDGPEGPKGRTGP 693
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 469 KGDRGFDGLPGLPGEKGHRG--DTGAQG 494
Score = 38 (18.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 902 GERGLPGTAGGPGLKGNEGP 921
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1000 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1029
>UNIPROTKB|Q4VXY6 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0001503 "ossification" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0005592 "collagen type XI"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 GO:GO:0005840 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
EMBL:AL031228 Pfam:PF02210 GO:GO:0005201 KO:K06236 SMART:SM00210
CTD:1302 EMBL:AL645940 EMBL:AL844527 EMBL:AL845446 EMBL:CR759733
EMBL:CR936877 RefSeq:NP_542412.2 UniGene:Hs.390171 GeneID:1302
KEGG:hsa:1302 HGNC:HGNC:2187 ProteinModelPortal:Q4VXY6
Ensembl:ENST00000374708 Ensembl:ENST00000383219
Ensembl:ENST00000447349 Ensembl:ENST00000448717 Uniprot:Q4VXY6
Length = 1650
Score = 114 (45.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 733 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 790
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 791 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 834
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1114 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1170
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1171 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1229
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1135 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1191
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1192 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1248
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1075 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1134
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1135 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1194
Query: 170 GG 171
GG
Sbjct: 1195 GG 1196
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 631 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 690
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 691 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 750
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 751 RGERGPTG 758
Score = 44 (20.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 669 DRGEVGVPGSRGEDGPEGPKGRTGP 693
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 469 KGDRGFDGLPGLPGEKGHRG--DTGAQG 494
Score = 38 (18.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 902 GERGLPGTAGGPGLKGNEGP 921
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1000 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1029
>UNIPROTKB|G3V763 [details] [associations]
symbol:Col5a1 "Collagen alpha-1(V) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:70920 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
UniGene:Rn.117 EMBL:CH474001 Ensembl:ENSRNOT00000012334
Uniprot:G3V763
Length = 1840
Score = 114 (45.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 791 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 850
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 851 GGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 910
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 911 RGQRGPTG 918
Score = 112 (44.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 908 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 967
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 968 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1023
Score = 111 (44.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 44/124 (35%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1061 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1118
Query: 117 EKRG-PGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
++G PG+K +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1119 GEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1178
Query: 168 APGG 171
P G
Sbjct: 1179 GPPG 1182
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1325 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1381
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1382 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1434
Score = 48 (22.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 897 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 925
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1160 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1189
Score = 45 (20.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 829 DRGEIGPPGPRGEDGPEGPKGRG 851
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 629 KGDRGFDGLAGLPGEKGHRGDPG 651
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGPGDKKA-RGP 33
E+G PG+K +GP + +GP
Sbjct: 1120 EKGVPGEKGPQGPAGRDGLQGP 1141
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 764 PGHPGKEGPPGEKGGQGP 781
Score = 33 (16.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 757 MPGADGPPGHPGKEGPPGEKGGQGP 781
>UNIPROTKB|E7ERP3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021463 ProteinModelPortal:E7ERP3 Ensembl:ENST00000551262
ArrayExpress:E7ERP3 Uniprot:E7ERP3
Length = 1655
Score = 114 (45.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 738 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 795
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 796 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 839
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1119 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1175
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1176 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1234
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1140 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1196
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1197 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1253
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1080 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1139
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1140 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1199
Query: 170 GG 171
GG
Sbjct: 1200 GG 1201
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 636 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 695
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 696 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 755
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 756 RGERGPTG 763
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 674 DRGEVGVPGSRGEDGPEGPKGRTGP 698
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 474 KGDRGFDGLPGLPGEKGHRG--DTGAQG 499
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 907 GERGLPGTAGGPGLKGNEGP 926
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1005 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1034
>UNIPROTKB|E7ETH3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01021679
Ensembl:ENST00000547561 Ensembl:ENST00000553210 Uniprot:E7ETH3
Length = 1655
Score = 114 (45.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 738 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 795
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 796 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 839
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1119 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1175
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1176 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1234
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1140 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1196
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1197 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1253
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1080 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1139
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1140 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1199
Query: 170 GG 171
GG
Sbjct: 1200 GG 1201
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 636 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 695
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 696 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 755
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 756 RGERGPTG 763
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 674 DRGEVGVPGSRGEDGPEGPKGRTGP 698
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 474 KGDRGFDGLPGLPGEKGHRG--DTGAQG 499
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 907 GERGLPGTAGGPGLKGNEGP 926
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1005 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1034
>UNIPROTKB|H0Y3B3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000374712 Ensembl:ENST00000551572
Uniprot:H0Y3B3
Length = 1655
Score = 114 (45.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 738 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 795
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 796 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 839
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1119 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1175
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1176 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1234
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1140 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1196
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1197 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1253
Score = 102 (41.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1080 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1139
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1140 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1199
Query: 170 GG 171
GG
Sbjct: 1200 GG 1201
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 636 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 695
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 696 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 755
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 756 RGERGPTG 763
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 674 DRGEVGVPGSRGEDGPEGPKGRTGP 698
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 474 KGDRGFDGLPGLPGEKGHRG--DTGAQG 499
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 907 GERGLPGTAGGPGLKGNEGP 926
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1005 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1034
>UNIPROTKB|K7GST7 [details] [associations]
symbol:LOC100520915 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 SMART:SM00210
GeneTree:ENSGT00700000104155 EMBL:CT737383 RefSeq:XP_003128381.1
Ensembl:ENSSSCT00000036253 GeneID:100520915 Uniprot:K7GST7
Length = 1651
Score = 112 (44.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 48/128 (37%), Positives = 62/128 (48%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 631 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGR 690
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG PG
Sbjct: 691 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKPGP 750
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 751 RGERGPTG 758
Score = 107 (42.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 44/116 (37%), Positives = 56/116 (48%)
Query: 65 PGDKEERGP-GDKEKRG-PGDKEERGP-GDKEERG-PGDREKRGPGDKEERGP-GDKEKR 119
PG+K E G G +G PG K RG G+K E G PG+ GP +GP GD +
Sbjct: 1123 PGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEVGPPGP-----KGPTGDDGPK 1177
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERAPGG 171
G PG G PG E GP ++ G K +RG+ G+ + G PG E P G
Sbjct: 1178 GNPGPVGFPGDPGPPGEAGPRGQD----GAKGDRGEDGEPGQPGSPGPTGENGPPG 1229
Score = 107 (42.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 43/117 (36%), Positives = 56/117 (47%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERG-PGDKEK 118
PG + ERGP G + +RGP G + G G GP G +RG PG + G PG K
Sbjct: 748 PGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGP 807
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 808 PGPPGKDGL-PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPG 863
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/106 (40%), Positives = 51/106 (48%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1135 PGVQGE--PGVKGPRGERGEKGESGQPGEVGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1191
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP 161
PG+ RG G K +RG G+ + G PG E G G KRGP
Sbjct: 1192 -PGEAGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP 1236
Score = 100 (40.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 44/119 (36%), Positives = 58/119 (48%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDKEK 118
PG + GP G +GP G GP G+K E G G +G PG K RG G+K +
Sbjct: 1096 PGPRGPAGPNGADGPQGPSGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGE 1155
Query: 119 RG-PGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGP-GDK-EERAPG 170
G PG+ GP G + GP G+ G PGD G+ G + + G GD+ E+ PG
Sbjct: 1156 SGQPGEVGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEAGPRGQDGAKGDRGEDGEPG 1214
Score = 51 (23.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ + PG + ERGP G + RGP
Sbjct: 737 GEKGARGLSGKPGPRGERGPTGPRGQRGP 765
Score = 44 (20.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 669 DRGEVGVPGSRGEDGPEGPKGRTGP 693
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 469 KGDRGFDGLPGLPGEKGHRG--DTGAQG 494
Score = 38 (18.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 902 GERGLPGTAGGPGLKGNEGP 921
Score = 38 (18.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ G+K E GP G GP
Sbjct: 1000 KGEVGDPGQKGAKGNKGEHGPPGPPGPLGP 1029
>UNIPROTKB|E7END8 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021044 ProteinModelPortal:E7END8 Ensembl:ENST00000547597
ArrayExpress:E7END8 Uniprot:E7END8
Length = 1676
Score = 114 (45.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 759 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 816
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 817 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 860
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1140 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1196
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1197 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1255
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1161 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1217
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1218 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1274
Score = 102 (41.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1101 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1160
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1161 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1220
Query: 170 GG 171
GG
Sbjct: 1221 GG 1222
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 657 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 716
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 717 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 776
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 777 RGERGPTG 784
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 695 DRGEVGVPGSRGEDGPEGPKGRTGP 719
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 495 KGDRGFDGLPGLPGEKGHRG--DTGAQG 520
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 928 GERGLPGTAGGPGLKGNEGP 947
Score = 37 (18.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1026 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1055
>UNIPROTKB|E7EUR3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01020718
Ensembl:ENST00000547846 Ensembl:ENST00000552971 Uniprot:E7EUR3
Length = 1676
Score = 114 (45.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 759 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 816
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 817 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 860
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1140 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1196
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1197 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1255
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1161 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1217
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1218 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1274
Score = 102 (41.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1101 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1160
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1161 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1220
Query: 170 GG 171
GG
Sbjct: 1221 GG 1222
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 657 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 716
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 717 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 776
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 777 RGERGPTG 784
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 695 DRGEVGVPGSRGEDGPEGPKGRTGP 719
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 495 KGDRGFDGLPGLPGEKGHRG--DTGAQG 520
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 928 GERGLPGTAGGPGLKGNEGP 947
Score = 37 (18.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1026 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1055
>UNIPROTKB|H0Y3M9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000395197 Ensembl:ENST00000547883
Uniprot:H0Y3M9
Length = 1676
Score = 114 (45.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 759 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 816
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 817 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 860
Score = 109 (43.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1140 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1196
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1197 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1255
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1161 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1217
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1218 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1274
Score = 102 (41.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1101 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1160
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1161 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1220
Query: 170 GG 171
GG
Sbjct: 1221 GG 1222
Score = 102 (41.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 657 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 716
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 717 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 776
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 777 RGERGPTG 784
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 695 DRGEVGVPGSRGEDGPEGPKGRTGP 719
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 495 KGDRGFDGLPGLPGEKGHRG--DTGAQG 520
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 928 GERGLPGTAGGPGLKGNEGP 947
Score = 37 (18.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1026 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1055
>UNIPROTKB|H0YHN2 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0YHN2 Ensembl:ENST00000548637 Bgee:H0YHN2
Uniprot:H0YHN2
Length = 1683
Score = 114 (45.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 766 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 823
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 824 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 867
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1147 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1203
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1204 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1262
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1168 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1224
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1225 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1281
Score = 102 (41.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1108 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1167
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1168 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1227
Query: 170 GG 171
GG
Sbjct: 1228 GG 1229
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 664 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 723
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 724 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 783
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 784 RGERGPTG 791
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 702 DRGEVGVPGSRGEDGPEGPKGRTGP 726
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 502 KGDRGFDGLPGLPGEKGHRG--DTGAQG 527
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 935 GERGLPGTAGGPGLKGNEGP 954
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1033 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1062
>UNIPROTKB|E7EV22 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01020710 Ensembl:ENST00000546402 ArrayExpress:E7EV22
Uniprot:E7EV22
Length = 1689
Score = 114 (45.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 772 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 829
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 830 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 873
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1153 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1209
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1210 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1268
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1174 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1230
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1231 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1287
Score = 102 (41.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1114 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1173
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1174 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1233
Query: 170 GG 171
GG
Sbjct: 1234 GG 1235
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 670 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 729
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 730 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 789
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 790 RGERGPTG 797
Score = 44 (20.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 708 DRGEVGVPGSRGEDGPEGPKGRTGP 732
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 508 KGDRGFDGLPGLPGEKGHRG--DTGAQG 533
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 941 GERGLPGTAGGPGLKGNEGP 960
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1039 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1068
>UNIPROTKB|H0YHM9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:AL844527
EMBL:AL845446 EMBL:CR759733 EMBL:CR936877 HGNC:HGNC:2187
Ensembl:ENST00000374713 Ensembl:ENST00000550101
Ensembl:ENST00000550955 Ensembl:ENST00000551786 Uniprot:H0YHM9
Length = 1689
Score = 114 (45.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 772 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 829
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 830 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 873
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1153 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1209
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1210 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1268
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1174 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1230
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1231 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1287
Score = 102 (41.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1114 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1173
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1174 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1233
Query: 170 GG 171
GG
Sbjct: 1234 GG 1235
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 670 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 729
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 730 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 789
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 790 RGERGPTG 797
Score = 44 (20.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 708 DRGEVGVPGSRGEDGPEGPKGRTGP 732
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 508 KGDRGFDGLPGLPGEKGHRG--DTGAQG 533
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 941 GERGLPGTAGGPGLKGNEGP 960
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1039 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1068
>UNIPROTKB|J3KNM7 [details] [associations]
symbol:COL4A4 "Collagen alpha-4(IV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
EMBL:CH471063 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
EMBL:AC079235 EMBL:AC073149 UniGene:Hs.591645 HGNC:HGNC:2206
ChiTaRS:COL4A4 ProteinModelPortal:J3KNM7 Ensembl:ENST00000329662
Uniprot:J3KNM7
Length = 1687
Score = 104 (41.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 36/97 (37%), Positives = 39/97 (40%)
Query: 81 PGDKEERG-PGDKEERGPGDREKRGP----GDKEERGPGDKEKRGPGDKEKRGP-GDKEE 134
PG K ERG PG PG R K+GP G GP R P D GP GD+
Sbjct: 1206 PGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGP 1265
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
GP D PG G D + PGD P G
Sbjct: 1266 PGP-DGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPG 1301
Score = 99 (39.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 40/114 (35%), Positives = 46/114 (40%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K G PG G G K +G + GP PG K ERG PG P
Sbjct: 1165 PGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGI-PGLKGERGDPGSPGISPP 1223
Query: 122 GDKEKRGP----GDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPG 170
G + K+GP G GP R P D + G GD+ GP D APG
Sbjct: 1224 GPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGP-DGPRGAPG 1276
Score = 54 (24.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGP-GDKEERGPGDKKARGP 33
R A +K + GP GD E+ PG K GP
Sbjct: 588 RDGHAGEKGDPGPPGDHEDATPGGKGFPGP 617
Score = 43 (20.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 6 GERASDKEERGPGDKEERG-------PGDKKARG 32
GER E PG K E G PGD+ RG
Sbjct: 918 GERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRG 951
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 6 GERASDKEERGP----GDKEERGP 25
GE+ + +RGP GDK ++GP
Sbjct: 89 GEKGM-RGDRGPPGAAGDKGDKGP 111
Score = 34 (17.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+G + R G K ERGP
Sbjct: 553 KGAKGDMVVSRVKGHKGERGP 573
>UNIPROTKB|P53420 [details] [associations]
symbol:COL4A4 "Collagen alpha-4(IV) chain" species:9606
"Homo sapiens" [GO:0005587 "collagen type IV" evidence=IDA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IMP] [GO:0032836 "glomerular basement membrane
development" evidence=IMP] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005788 GO:GO:0005605
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 GO:GO:0005587
Gene3D:2.170.240.10 KO:K06237 OrthoDB:EOG4XGZZF EMBL:AC079235
EMBL:AB008496 MIM:141200 MIM:203780 Orphanet:88919 Orphanet:97562
GO:GO:0032836 EMBL:X81053 EMBL:Y17397 EMBL:Y17398 EMBL:Y17399
EMBL:Y17400 EMBL:Y17401 EMBL:Y17402 EMBL:Y17403 EMBL:Y17404
EMBL:Y17405 EMBL:Y17406 EMBL:Y17407 EMBL:Y17408 EMBL:Y17409
EMBL:Y17410 EMBL:Y17411 EMBL:Y17412 EMBL:Y17413 EMBL:Y17427
EMBL:Y17426 EMBL:Y17414 EMBL:Y17415 EMBL:Y17416 EMBL:Y17417
EMBL:Y17418 EMBL:Y17419 EMBL:Y17420 EMBL:Y17443 EMBL:Y17442
EMBL:Y17441 EMBL:Y17440 EMBL:Y17439 EMBL:Y17438 EMBL:Y17437
EMBL:Y17436 EMBL:Y17435 EMBL:Y17434 EMBL:Y17433 EMBL:Y17432
EMBL:Y17431 EMBL:Y17430 EMBL:Y17429 EMBL:Y17428 EMBL:Y17421
EMBL:Y17422 EMBL:Y17423 EMBL:Y17424 EMBL:Y17425 EMBL:AC073149
EMBL:D17391 IPI:IPI00478572 PIR:A55360 RefSeq:NP_000083.3
UniGene:Hs.591645 ProteinModelPortal:P53420 SMR:P53420
IntAct:P53420 STRING:P53420 PhosphoSite:P53420 DMDM:259016360
PaxDb:P53420 PRIDE:P53420 Ensembl:ENST00000396625 GeneID:1286
KEGG:hsa:1286 UCSC:uc021vxr.1 CTD:1286 GeneCards:GC02M227867
H-InvDB:HIX0030014 HGNC:HGNC:2206 MIM:120131 neXtProt:NX_P53420
PharmGKB:PA26721 InParanoid:P53420 OMA:FRGDMGD ChiTaRS:COL4A4
GenomeRNAi:1286 NextBio:5201 Bgee:P53420 CleanEx:HS_COL4A4
Genevestigator:P53420 GermOnline:ENSG00000081052 Uniprot:P53420
Length = 1690
Score = 104 (41.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 36/97 (37%), Positives = 39/97 (40%)
Query: 81 PGDKEERG-PGDKEERGPGDREKRGP----GDKEERGPGDKEKRGPGDKEKRGP-GDKEE 134
PG K ERG PG PG R K+GP G GP R P D GP GD+
Sbjct: 1206 PGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGP 1265
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
GP D PG G D + PGD P G
Sbjct: 1266 PGP-DGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPG 1301
Score = 99 (39.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 40/114 (35%), Positives = 46/114 (40%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERGPGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K G PG G G K +G + GP PG K ERG PG P
Sbjct: 1165 PGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGI-PGLKGERGDPGSPGISPP 1223
Query: 122 GDKEKRGP----GDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPG 170
G + K+GP G GP R P D + G GD+ GP D APG
Sbjct: 1224 GPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGP-DGPRGAPG 1276
Score = 54 (24.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGP-GDKEERGPGDKKARGP 33
R A +K + GP GD E+ PG K GP
Sbjct: 588 RDGHAGEKGDPGPPGDHEDATPGGKGFPGP 617
Score = 43 (20.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 6 GERASDKEERGPGDKEERG-------PGDKKARG 32
GER E PG K E G PGD+ RG
Sbjct: 918 GERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRG 951
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 6 GERASDKEERGP----GDKEERGP 25
GE+ + +RGP GDK ++GP
Sbjct: 89 GEKGM-RGDRGPPGAAGDKGDKGP 111
Score = 34 (17.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 5 RGERASDKEERGPGDKEERGP 25
+G + R G K ERGP
Sbjct: 553 KGAKGDMVVSRVKGHKGERGP 573
>UNIPROTKB|E9PE40 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021833 ProteinModelPortal:E9PE40 Ensembl:ENST00000546998
ArrayExpress:E9PE40 Uniprot:E9PE40
Length = 1710
Score = 114 (45.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 793 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 850
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 851 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 894
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1174 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1230
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1231 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1289
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1195 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1251
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1252 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1308
Score = 102 (41.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1135 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1194
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1195 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1254
Query: 170 GG 171
GG
Sbjct: 1255 GG 1256
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 691 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 750
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 751 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 810
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 811 RGERGPTG 818
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 729 DRGEVGVPGSRGEDGPEGPKGRTGP 753
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 529 KGDRGFDGLPGLPGEKGHRG--DTGAQG 554
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 962 GERGLPGTAGGPGLKGNEGP 981
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1060 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1089
>UNIPROTKB|H0Y3B5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:AL844527
EMBL:AL845446 EMBL:CR759733 EMBL:CR936877 HGNC:HGNC:2187
Ensembl:ENST00000374714 Ensembl:ENST00000548739
Ensembl:ENST00000549088 Ensembl:ENST00000552556 Uniprot:H0Y3B5
Length = 1710
Score = 114 (45.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 793 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 850
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 851 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 894
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1174 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1230
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1231 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1289
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1195 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1251
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1252 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1308
Score = 102 (41.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1135 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1194
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1195 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1254
Query: 170 GG 171
GG
Sbjct: 1255 GG 1256
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 691 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 750
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 751 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 810
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 811 RGERGPTG 818
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 729 DRGEVGVPGSRGEDGPEGPKGRTGP 753
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 529 KGDRGFDGLPGLPGEKGHRG--DTGAQG 554
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 962 GERGLPGTAGGPGLKGNEGP 981
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1060 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1089
>UNIPROTKB|E7EP47 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01022739
Ensembl:ENST00000552765 Ensembl:ENST00000553240 Uniprot:E7EP47
Length = 1715
Score = 114 (45.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 798 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 855
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 856 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 899
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1179 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1235
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1236 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1294
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1200 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1256
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1257 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1313
Score = 102 (41.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1140 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1199
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1200 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1259
Query: 170 GG 171
GG
Sbjct: 1260 GG 1261
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 696 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 755
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 756 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 815
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 816 RGERGPTG 823
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 734 DRGEVGVPGSRGEDGPEGPKGRTGP 758
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 534 KGDRGFDGLPGLPGEKGHRG--DTGAQG 559
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 967 GERGLPGTAGGPGLKGNEGP 986
Score = 37 (18.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1065 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1094
>UNIPROTKB|E7EQ71 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01020835 Ensembl:ENST00000552796 ArrayExpress:E7EQ71
Uniprot:E7EQ71
Length = 1715
Score = 114 (45.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 798 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 855
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 856 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 899
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1179 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1235
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1236 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1294
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1200 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1256
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1257 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1313
Score = 102 (41.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1140 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1199
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1200 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1259
Query: 170 GG 171
GG
Sbjct: 1260 GG 1261
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 696 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 755
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 756 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 815
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 816 RGERGPTG 823
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 734 DRGEVGVPGSRGEDGPEGPKGRTGP 758
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 534 KGDRGFDGLPGLPGEKGHRG--DTGAQG 559
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 967 GERGLPGTAGGPGLKGNEGP 986
Score = 37 (18.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1065 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1094
>UNIPROTKB|H0YHM5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000357486 Ensembl:ENST00000551536
Uniprot:H0YHM5
Length = 1715
Score = 114 (45.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 798 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 855
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 856 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 899
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1179 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1235
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1236 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1294
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1200 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1256
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1257 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1313
Score = 102 (41.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1140 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1199
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1200 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1259
Query: 170 GG 171
GG
Sbjct: 1260 GG 1261
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 696 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 755
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 756 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 815
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 816 RGERGPTG 823
Score = 44 (20.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 734 DRGEVGVPGSRGEDGPEGPKGRTGP 758
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 534 KGDRGFDGLPGLPGEKGHRG--DTGAQG 559
Score = 38 (18.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 967 GERGLPGTAGGPGLKGNEGP 986
Score = 37 (18.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1065 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1094
>UNIPROTKB|E7ERR1 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI00939336
Ensembl:ENST00000549836 Ensembl:ENST00000549885 Uniprot:E7ERR1
Length = 1736
Score = 114 (45.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 109 (43.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1200 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1256
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1257 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1315
Score = 103 (41.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1221 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1277
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1278 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1334
Score = 102 (41.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1161 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1220
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1221 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1280
Query: 170 GG 171
GG
Sbjct: 1281 GG 1282
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 717 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 837 RGERGPTG 844
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGHRG--DTGAQG 580
Score = 38 (18.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 988 GERGLPGTAGGPGLKGNEGP 1007
Score = 37 (18.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1086 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1115
>UNIPROTKB|E9PB88 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI00893615 ProteinModelPortal:E9PB88 Ensembl:ENST00000551413
ArrayExpress:E9PB88 Uniprot:E9PB88
Length = 1736
Score = 114 (45.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 109 (43.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1200 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1256
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1257 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1315
Score = 103 (41.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1221 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1277
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1278 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1334
Score = 102 (41.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1161 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1220
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1221 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1280
Query: 170 GG 171
GG
Sbjct: 1281 GG 1282
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 717 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 837 RGERGPTG 844
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGHRG--DTGAQG 580
Score = 38 (18.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 988 GERGLPGTAGGPGLKGNEGP 1007
Score = 37 (18.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1086 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1115
>UNIPROTKB|P13942 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030020 "extracellular matrix structural constituent conferring
tensile strength" evidence=NAS] [GO:0001501 "skeletal system
development" evidence=IMP;NAS] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0060023
"soft palate development" evidence=IMP] [GO:0030199 "collagen
fibril organization" evidence=IDA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0005592 "collagen type XI"
evidence=NAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Reactome:REACT_118779 EMBL:CH471081 GO:GO:0046872
GO:GO:0030199 GO:GO:0030674 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0001894
GO:GO:0007605 Orphanet:90635 GO:GO:0051216 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0002062 GO:GO:0048705 EMBL:AL031228
Orphanet:90636 Pfam:PF02210 HOVERGEN:HBG004933 KO:K06236
Orphanet:1427 GO:GO:0030020 SMART:SM00210 Orphanet:2021
GO:GO:0005592 CTD:1302 EMBL:U32169 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:AL845446 EMBL:CR759733 EMBL:CR936877
EMBL:BC053886 EMBL:U41069 EMBL:U41065 EMBL:U41066 EMBL:U41067
EMBL:L18987 EMBL:J04974 IPI:IPI00011283 IPI:IPI00219922
IPI:IPI00219923 IPI:IPI00219924 IPI:IPI00219925 IPI:IPI00219927
IPI:IPI00413940 IPI:IPI00748259 IPI:IPI00937105 PIR:S34790
RefSeq:NP_001157243.1 RefSeq:NP_542411.2 RefSeq:NP_542412.2
UniGene:Hs.390171 ProteinModelPortal:P13942 IntAct:P13942
MINT:MINT-5222373 STRING:P13942 PhosphoSite:P13942 DMDM:116241308
PaxDb:P13942 PRIDE:P13942 Ensembl:ENST00000341947
Ensembl:ENST00000383087 Ensembl:ENST00000383088
Ensembl:ENST00000395194 Ensembl:ENST00000439039
Ensembl:ENST00000447741 Ensembl:ENST00000452937
Ensembl:ENST00000547261 Ensembl:ENST00000547999
Ensembl:ENST00000549289 Ensembl:ENST00000549381
Ensembl:ENST00000549811 Ensembl:ENST00000550561
Ensembl:ENST00000551542 Ensembl:ENST00000551758 GeneID:1302
KEGG:hsa:1302 UCSC:uc003ocx.1 UCSC:uc003ocy.1 UCSC:uc003ocz.1
GeneCards:GC06M033130 H-InvDB:HIX0033301 H-InvDB:HIX0166403
H-InvDB:HIX0166658 H-InvDB:HIX0166919 H-InvDB:HIX0167181
H-InvDB:HIX0167416 H-InvDB:HIX0184201 H-InvDB:HIX0207630
HGNC:HGNC:2187 MIM:120290 MIM:184840 MIM:215150 MIM:277610
MIM:601868 MIM:609706 MIM:614524 neXtProt:NX_P13942 Orphanet:166100
Orphanet:3450 PharmGKB:PA26703 HOGENOM:HOG000205337
InParanoid:P13942 GenomeRNAi:1302 NextBio:5291 ArrayExpress:P13942
Bgee:P13942 CleanEx:HS_COL11A2 Genevestigator:P13942
GermOnline:ENSG00000204248 GO:GO:0060023 Uniprot:P13942
Length = 1736
Score = 114 (45.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPLGPPGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 109 (43.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 45/119 (37%), Positives = 55/119 (46%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRGP 121
PG GP EK PG E PG + E G G R +RG G+ + G PG +GP
Sbjct: 1200 PGGVGNLGPPG-EKGEPG--ESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGP 1256
Query: 122 -GDKEKRG-PGDKEERG-PGDKEERGP----GDKEERGQ-GDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP G K +RG+ G+ + G PG E P G
Sbjct: 1257 TGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG 1315
Score = 103 (41.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/118 (38%), Positives = 54/118 (45%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-PGDKEERGP-GDREKRGP-GDKEERG-PGDKEKR 119
PG + E PG K RG G+K E G PG+ GP G GP G+ G PGD
Sbjct: 1221 PGIQGE--PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGP- 1277
Query: 120 GPGDKEKRGP-GDKEERGP-GDKEERG-PGDKEERGQ-GDKEKRGPGDK--EERAPGG 171
PG+ RG G K +RG G+ + G PG E G G KRGP E GG
Sbjct: 1278 -PGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGG 1334
Score = 102 (41.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 45/122 (36%), Positives = 54/122 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGPG-----DKEERGPGDREKRGP-GDKEERGP-GD 115
PG E+G GD GP G RGP D + PG GP G+K E G G
Sbjct: 1161 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1220
Query: 116 KEKRG-PGDKEKRGP-GDKEERG-PGDKEERGP-GDKEERG-QGDKEKRG-PGDKEERAP 169
+G PG K RG G+K E G PG+ GP G + G +G+ G PGD
Sbjct: 1221 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGE 1280
Query: 170 GG 171
GG
Sbjct: 1281 GG 1282
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 717 PGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 837 RGERGPTG 844
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGHRG--DTGAQG 580
Score = 38 (18.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 6 GERASDKEERGPGDKEERGP 25
GER GPG K GP
Sbjct: 988 GERGLPGTAGGPGLKGNEGP 1007
Score = 37 (18.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 RGERASDKEERGP-GDKEERGP-GDKKARGP 33
+GE D ++G G+K E GP G GP
Sbjct: 1086 KGE-VGDPGQKGTKGNKGEHGPPGPPGPIGP 1115
>UNIPROTKB|F1MRP6 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9913
"Bos taurus" [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894 GO:GO:0007605
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00282 GO:GO:0002062 GO:GO:0048705 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
IPI:IPI00717479 UniGene:Bt.2303 GO:GO:0060023 OMA:MQEDEAI
EMBL:DAAA02054891 EMBL:DAAA02054889 EMBL:DAAA02054890
Ensembl:ENSBTAT00000000793 Uniprot:F1MRP6
Length = 1736
Score = 114 (45.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 103 (41.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 717 PGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 837 RGERGPTG 844
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 40 (19.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ ++ E GP E + ARGP
Sbjct: 351 GDDYHEETELGPALSAETARSEAAARGP 378
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGHRG--DTGAQG 580
>UNIPROTKB|Q32S24 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9913
"Bos taurus" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0046872 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 EMBL:AY957499 Pfam:PF02210 GO:GO:0005201
HOVERGEN:HBG004933 KO:K06236 Reactome:REACT_133391 SMART:SM00210
IPI:IPI00717479 RefSeq:NP_001039664.1 UniGene:Bt.2303 IntAct:Q32S24
STRING:Q32S24 PRIDE:Q32S24 GeneID:515435 KEGG:bta:515435 CTD:1302
NextBio:20871826 Uniprot:Q32S24
Length = 1736
Score = 114 (45.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/105 (40%), Positives = 52/105 (49%)
Query: 65 PGDKEERGP-GDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKR 119
PG E+G G K GP + ERGP G + +RGP G K G G GP G +R
Sbjct: 819 PGASGEKGARGLSGKSGP--RGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876
Query: 120 G-PGDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGP 161
G PG + G PG K GP K+ PG +RG+ G + K GP
Sbjct: 877 GLPGPQGPNGFPGPKGPPGPPGKDGL-PGHPGQRGEVGFQGKTGP 920
Score = 103 (41.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 47/128 (36%), Positives = 61/128 (47%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERG-PGDREKRG-PGDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + G PG + E GP G K +
Sbjct: 717 PGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGR 776
Query: 119 RGP-GDKEKRG-PGDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD G G+K + G PG +GP G G G+K RG G
Sbjct: 777 TGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGP 836
Query: 164 KEERAPGG 171
+ ER P G
Sbjct: 837 RGERGPTG 844
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 11 DKEERG-PGDKEERGPGDKKAR-GP 33
D+ E G PG + E GP K R GP
Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGP 779
Score = 40 (19.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G+ ++ E GP E + ARGP
Sbjct: 351 GDDYHEETELGPALSAETARSEAAARGP 378
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARG 32
+G+R D PG+K RG D A+G
Sbjct: 555 KGDRGFDGLPGLPGEKGHRG--DTGAQG 580
>MGI|MGI:2685312 [details] [associations]
symbol:Col28a1 "collagen, type XXVIII, alpha 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0010466 "negative regulation of peptidase activity"
evidence=IEA] [GO:0030414 "peptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50279 SMART:SM00131
SMART:SM00327 MGI:MGI:2685312 GO:GO:0004867 GO:GO:0007155
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 HOGENOM:HOG000085654 GeneTree:ENSGT00530000063022
HSSP:P18614 CTD:340267 eggNOG:NOG236064 HOVERGEN:HBG104822
OMA:DPNFEIF OrthoDB:EOG42JNR4 EMBL:AJ890449 EMBL:AJ890450
IPI:IPI00357842 IPI:IPI00885821 RefSeq:NP_001032954.1
UniGene:Mm.297404 ProteinModelPortal:Q2UY11 SMR:Q2UY11
PhosphoSite:Q2UY11 PRIDE:Q2UY11 DNASU:213945
Ensembl:ENSMUST00000115537 GeneID:213945 KEGG:mmu:213945
UCSC:uc009axi.1 InParanoid:Q2UY11 NextBio:374132 Bgee:Q2UY11
CleanEx:MM_COL28A1 Genevestigator:Q2UY11 Uniprot:Q2UY11
Length = 1141
Score = 118 (46.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 47/127 (37%), Positives = 61/127 (48%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGPGDKEERGP-------GDREKRG----PGDKEERGP 113
PG K ERGP K PGD ++ G+ ERGP GD+ +RG PG K ++GP
Sbjct: 259 PGIKGERGP----KGNPGDAQK---GETGERGPVGIPGYKGDKGERGECGKPGMKGDKGP 311
Query: 114 -GDKEKRGPGDKEKRG--PGDKEERG-PGDKEERGP----GDKEERGQGDKEKRGPGDKE 165
G +GP + G PGD +G G+K E GP G G G + +G +E
Sbjct: 312 EGPYGPKGPRGIQGIGGPPGDPGPKGFQGNKGEPGPPGPYGPPGAPGIGQQGVKGERGQE 371
Query: 166 ER--APG 170
R APG
Sbjct: 372 GRMGAPG 378
Score = 36 (17.7 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PG K ERGP
Sbjct: 259 PGIKGERGP 267
>RGD|2372 [details] [associations]
symbol:Col11a1 "collagen, type XI, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001502 "cartilage condensation" evidence=ISO]
[GO:0001503 "ossification" evidence=IEP] [GO:0002063 "chondrocyte
development" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005581 "collagen" evidence=ISO]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0006029
"proteoglycan metabolic process" evidence=ISO] [GO:0007601 "visual
perception" evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0030199 "collagen fibril organization"
evidence=ISO;TAS] [GO:0031012 "extracellular matrix"
evidence=ISO;IDA] [GO:0035989 "tendon development" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048705
"skeletal system morphogenesis" evidence=ISO] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=ISO] [GO:0051216 "cartilage development" evidence=ISO]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=ISO] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 RGD:2372 GO:GO:0046872 GO:GO:0007601
GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0050910
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0001502
GO:GO:0048704 GO:GO:0006029 GO:GO:0055010 Pfam:PF02210 GO:GO:0005201
GO:GO:0002063 HOGENOM:HOG000085654 KO:K06236 HOVERGEN:HBG103137
OrthoDB:EOG49GKHM SMART:SM00210 GeneTree:ENSGT00700000104155 CTD:1301
EMBL:AABR03012126 EMBL:AABR03013126 EMBL:AABR03014171
EMBL:AABR03015382 EMBL:AABR03015832 EMBL:AABR03016562
EMBL:AABR03017847 EMBL:AABR03017951 EMBL:AABR03018245
EMBL:AABR03019675 EMBL:AABR03023874 EMBL:U20116 EMBL:U20118
EMBL:U20121 IPI:IPI00189470 IPI:IPI00189494 IPI:IPI00325589
IPI:IPI00949317 IPI:IPI00959233 PIR:B31795 RefSeq:NP_037249.1
UniGene:Rn.260 IntAct:P20909 STRING:P20909 PhosphoSite:P20909
PRIDE:P20909 Ensembl:ENSRNOT00000023693 Ensembl:ENSRNOT00000068413
GeneID:25654 KEGG:rno:25654 UCSC:RGD:2372 InParanoid:P20909
NextBio:607535 ArrayExpress:P20909 Genevestigator:P20909
GermOnline:ENSRNOG00000023148 Uniprot:P20909
Length = 1804
Score = 114 (45.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 44/115 (38%), Positives = 55/115 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKRGP 121
G+K RG K PG + +RGP G + RG G K GP G GP G +RGP
Sbjct: 863 GEKGARGIAGK----PGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 918
Query: 122 -GDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPGGLV 173
G + G PG K GP K+ PG +RG+ G + K GP PGG+V
Sbjct: 919 QGPQGPVGFPGPKGPPGPAGKDGL-PGHPGQRGETGFQGKTGPP-----GPGGVV 967
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/113 (38%), Positives = 54/113 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEE-RGP-GDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG E+G PG+K +GP ++ +GP G GP GDK E G PG K +G
Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSKG 1139
Query: 121 PGDKEKRGP-GDKEERGP-------GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
DK + GP G +GP G E GP G + GQ GD+ RG PG
Sbjct: 1140 --DKGENGPPGPPGLQGPVGAPGIAGGDGEAGPRGQQGMFGQKGDEGARGFPG 1190
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 70 ERG-PGDKE----KRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK-EKR 119
ERG PG + K G G + +GP G ERG G G PG +GP G EK
Sbjct: 1029 ERGLPGAQGAPGLKGGEGPQGPQGPIGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKG 1088
Query: 120 GPGDKEKRGPGDKEE-RGP----GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG+K +GP ++ +GP G G PG+ ++G+ G+ ++G GDK E P G
Sbjct: 1089 APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPG 1148
Score = 104 (41.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 42/115 (36%), Positives = 52/115 (45%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEK 118
G+K E GP G +GP GD +G PG G PG + GP ++ G GDK +
Sbjct: 1277 GEKGEAGPPGAAGPPGIKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGE 1335
Query: 119 RG-PGDKEKRGPGDKEERGPGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G PG GP E PG +RGP G G QG+K +G E PG
Sbjct: 1336 DGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAEG-PPG 1388
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 41/113 (36%), Positives = 50/113 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRGP 121
PG G G EK PG+ GP G+ GP G+R ++G G GP K P
Sbjct: 1240 PGSIGSVG-GVGEKGEPGEAGNPGPPGEAGSGGPKGERGEKGEAGPPGAAGPPGI-KGPP 1297
Query: 122 GDKEKRG-PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP ++ G GDK + G PG P G
Sbjct: 1298 GDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG 1349
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/117 (37%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG E GP G KRGP G G G+K +G E GP K GP G + G
Sbjct: 1345 PGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAE--GPPGKT--GPVGPQGPSG 1400
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
PG + RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 1401 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 1456
Score = 99 (39.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 42/113 (37%), Positives = 51/113 (45%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG-P 121
PG E GP ++ G GDK E G PG GP E PG +RGP G G
Sbjct: 1315 PGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQ 1372
Query: 122 GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERA-PG 170
G+K +G E GP K GP G + G+ G + RG PG E+ PG
Sbjct: 1373 GEKGAKGEAGAE--GPPGKT--GPVGPQGPSGKPGPEGLRGIPGPVGEQGLPG 1421
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 6 GERASDKEERGPGDKEERGP----GDKKARGP 33
GE+ + PG + +RGP G + ARGP
Sbjct: 863 GEKGARGIAGKPGPRGQRGPTGPRGSRGARGP 894
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E GP G +GP
Sbjct: 1126 KGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1155
Score = 44 (20.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+G+R D PGDK RG ++ +GP
Sbjct: 595 KGDRGFDGLPGLPGDKGHRG--ERGPQGP 621
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PG+K +GP G +GP
Sbjct: 1086 EKGAPGEKGPQGPAGRDGVQGP 1107
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RG 32
GE+ E PG E G G K RG
Sbjct: 1250 GEKGEPGEAGNPGPPGEAGSGGPKGERG 1277
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGER PGD RG G+ RG
Sbjct: 613 RGERGPQGPPGLPGDDGMRGEDGEIGPRG 641
Score = 36 (17.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD +RGP
Sbjct: 463 PGDPGDRGP 471
Score = 35 (17.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + + PG ERGP + +GP
Sbjct: 899 GPKGTSGGDGPPGPPGERGP--QGPQGP 924
Score = 35 (17.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE S + G+K E GP A GP
Sbjct: 1265 GEAGSGGPKGERGEKGEAGPPG--AAGP 1290
Score = 34 (17.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GER + PG K GP + +GP
Sbjct: 1028 GERGLPGAQGAPGLKGGEGP--QGPQGP 1053
>UNIPROTKB|P20909 [details] [associations]
symbol:Col11a1 "Collagen alpha-1(XI) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:2372
GO:GO:0046872 GO:GO:0007601 GO:GO:0030199 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472
GO:GO:0050910 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0001502 GO:GO:0048704 GO:GO:0006029 GO:GO:0055010
Pfam:PF02210 GO:GO:0005201 GO:GO:0002063 HOGENOM:HOG000085654
KO:K06236 HOVERGEN:HBG103137 OrthoDB:EOG49GKHM SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:1301 EMBL:AABR03012126
EMBL:AABR03013126 EMBL:AABR03014171 EMBL:AABR03015382
EMBL:AABR03015832 EMBL:AABR03016562 EMBL:AABR03017847
EMBL:AABR03017951 EMBL:AABR03018245 EMBL:AABR03019675
EMBL:AABR03023874 EMBL:U20116 EMBL:U20118 EMBL:U20121
IPI:IPI00189470 IPI:IPI00189494 IPI:IPI00325589 IPI:IPI00949317
IPI:IPI00959233 PIR:B31795 RefSeq:NP_037249.1 UniGene:Rn.260
IntAct:P20909 STRING:P20909 PhosphoSite:P20909 PRIDE:P20909
Ensembl:ENSRNOT00000023693 Ensembl:ENSRNOT00000068413 GeneID:25654
KEGG:rno:25654 UCSC:RGD:2372 InParanoid:P20909 NextBio:607535
ArrayExpress:P20909 Genevestigator:P20909
GermOnline:ENSRNOG00000023148 Uniprot:P20909
Length = 1804
Score = 114 (45.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 44/115 (38%), Positives = 55/115 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKRGP 121
G+K RG K PG + +RGP G + RG G K GP G GP G +RGP
Sbjct: 863 GEKGARGIAGK----PGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 918
Query: 122 -GDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPGGLV 173
G + G PG K GP K+ PG +RG+ G + K GP PGG+V
Sbjct: 919 QGPQGPVGFPGPKGPPGPAGKDGL-PGHPGQRGETGFQGKTGPP-----GPGGVV 967
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/113 (38%), Positives = 54/113 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEE-RGP-GDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG E+G PG+K +GP ++ +GP G GP GDK E G PG K +G
Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSKG 1139
Query: 121 PGDKEKRGP-GDKEERGP-------GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
DK + GP G +GP G E GP G + GQ GD+ RG PG
Sbjct: 1140 --DKGENGPPGPPGLQGPVGAPGIAGGDGEAGPRGQQGMFGQKGDEGARGFPG 1190
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 70 ERG-PGDKE----KRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK-EKR 119
ERG PG + K G G + +GP G ERG G G PG +GP G EK
Sbjct: 1029 ERGLPGAQGAPGLKGGEGPQGPQGPIGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKG 1088
Query: 120 GPGDKEKRGPGDKEE-RGP----GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG+K +GP ++ +GP G G PG+ ++G+ G+ ++G GDK E P G
Sbjct: 1089 APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPG 1148
Score = 104 (41.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 42/115 (36%), Positives = 52/115 (45%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEK 118
G+K E GP G +GP GD +G PG G PG + GP ++ G GDK +
Sbjct: 1277 GEKGEAGPPGAAGPPGIKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGE 1335
Query: 119 RG-PGDKEKRGPGDKEERGPGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G PG GP E PG +RGP G G QG+K +G E PG
Sbjct: 1336 DGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAEG-PPG 1388
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 41/113 (36%), Positives = 50/113 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGPGDKEKRGP 121
PG G G EK PG+ GP G+ GP G+R ++G G GP K P
Sbjct: 1240 PGSIGSVG-GVGEKGEPGEAGNPGPPGEAGSGGPKGERGEKGEAGPPGAAGPPGI-KGPP 1297
Query: 122 GDKEKRG-PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
GD +G PG G PG E GP ++ G GDK + G PG P G
Sbjct: 1298 GDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG 1349
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/117 (37%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG E GP G KRGP G G G+K +G E GP K GP G + G
Sbjct: 1345 PGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAE--GPPGKT--GPVGPQGPSG 1400
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
PG + RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 1401 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 1456
Score = 99 (39.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 42/113 (37%), Positives = 51/113 (45%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG-P 121
PG E GP ++ G GDK E G PG GP E PG +RGP G G
Sbjct: 1315 PGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQ 1372
Query: 122 GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERA-PG 170
G+K +G E GP K GP G + G+ G + RG PG E+ PG
Sbjct: 1373 GEKGAKGEAGAE--GPPGKT--GPVGPQGPSGKPGPEGLRGIPGPVGEQGLPG 1421
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 6 GERASDKEERGPGDKEERGP----GDKKARGP 33
GE+ + PG + +RGP G + ARGP
Sbjct: 863 GEKGARGIAGKPGPRGQRGPTGPRGSRGARGP 894
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E GP G +GP
Sbjct: 1126 KGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1155
Score = 44 (20.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+G+R D PGDK RG ++ +GP
Sbjct: 595 KGDRGFDGLPGLPGDKGHRG--ERGPQGP 621
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PG+K +GP G +GP
Sbjct: 1086 EKGAPGEKGPQGPAGRDGVQGP 1107
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RG 32
GE+ E PG E G G K RG
Sbjct: 1250 GEKGEPGEAGNPGPPGEAGSGGPKGERG 1277
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGER PGD RG G+ RG
Sbjct: 613 RGERGPQGPPGLPGDDGMRGEDGEIGPRG 641
Score = 36 (17.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD +RGP
Sbjct: 463 PGDPGDRGP 471
Score = 35 (17.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + + PG ERGP + +GP
Sbjct: 899 GPKGTSGGDGPPGPPGERGP--QGPQGP 924
Score = 35 (17.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE S + G+K E GP A GP
Sbjct: 1265 GEAGSGGPKGERGEKGEAGPPG--AAGP 1290
Score = 34 (17.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GER + PG K GP + +GP
Sbjct: 1028 GERGLPGAQGAPGLKGGEGP--QGPQGP 1053
>MGI|MGI:88446 [details] [associations]
symbol:Col11a1 "collagen, type XI, alpha 1" species:10090 "Mus
musculus" [GO:0001502 "cartilage condensation" evidence=IMP]
[GO:0002063 "chondrocyte development" evidence=IMP] [GO:0003007
"heart morphogenesis" evidence=IGI] [GO:0003674
"molecular_function" evidence=ND] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005581 "collagen" evidence=IDA]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0006029
"proteoglycan metabolic process" evidence=IMP] [GO:0007601 "visual
perception" evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0030199 "collagen fibril organization"
evidence=IGI;IMP] [GO:0031012 "extracellular matrix"
evidence=ISO;IDA] [GO:0035989 "tendon development"
evidence=IGI;IMP] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048705 "skeletal system morphogenesis" evidence=IMP]
[GO:0050910 "detection of mechanical stimulus involved in sensory
perception of sound" evidence=ISO] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IMP] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 MGI:MGI:88446
GO:GO:0046872 GO:GO:0007601 GO:GO:0030199 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472
GO:GO:0050910 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0001502 GO:GO:0048704 GO:GO:0001503 GO:GO:0006029
GO:GO:0055010 Pfam:PF02210 GO:GO:0005201 GO:GO:0002063
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 OrthoDB:EOG49GKHM
SMART:SM00210 GeneTree:ENSGT00700000104155 CTD:1301 OMA:HPGKEGQ
EMBL:D38162 EMBL:BC052161 EMBL:S74574 IPI:IPI00230065
IPI:IPI00400048 PIR:A55648 RefSeq:NP_031755.2 UniGene:Mm.209715
ProteinModelPortal:Q61245 STRING:Q61245 PhosphoSite:Q61245
PaxDb:Q61245 PRIDE:Q61245 Ensembl:ENSMUST00000092155 GeneID:12814
KEGG:mmu:12814 NextBio:282270 Bgee:Q61245 CleanEx:MM_COL11A1
Genevestigator:Q61245 Uniprot:Q61245
Length = 1804
Score = 114 (45.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 44/115 (38%), Positives = 55/115 (47%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKRGP 121
G+K RG K PG + +RGP G + RG G K GP G GP G +RGP
Sbjct: 863 GEKGARGIAGK----PGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 918
Query: 122 -GDKEKRG-PGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPGGLV 173
G + G PG K GP K+ PG +RG+ G + K GP PGG+V
Sbjct: 919 QGPQGPVGFPGPKGPPGPAGKDGL-PGHPGQRGETGFQGKTGPP-----GPGGVV 967
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 70 ERG-PGDKE----KRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK-EKR 119
ERG PG + K G G + +GP G ERG G G PG +GP G EK
Sbjct: 1029 ERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKG 1088
Query: 120 GPGDKEKRGPGDKEE-RGP----GDKEERG-PGDKEERGQ-GDKEKRGP-GDKEERAPGG 171
PG+K +GP ++ +GP G G PG+ ++G+ G+ ++G GDK E P G
Sbjct: 1089 APGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPG 1148
Score = 105 (42.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/113 (38%), Positives = 54/113 (47%)
Query: 65 PGDKEERG-PGDKEKRGPGDKEE-RGP-GDKEERGPGDREKRGPGDKEERG-PGDKEKRG 120
PG E+G PG+K +GP ++ +GP G GP GDK E G PG K +G
Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSKG 1139
Query: 121 PGDKEKRGP-GDKEERGP-------GDKEERGP-GDKEERGQ-GDKEKRG-PG 162
DK + GP G +GP G E GP G + GQ GD+ RG PG
Sbjct: 1140 --DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPG 1190
Score = 104 (41.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 42/115 (36%), Positives = 52/115 (45%)
Query: 66 GDKEERGP----GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGPGDKEERGPGDKEK 118
G+K E GP G +GP GD +G PG G PG + GP ++ G GDK +
Sbjct: 1277 GEKGEAGPPGAAGPAGIKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGE 1335
Query: 119 RG-PGDKEKRGPGDKEERGPGDKEERGP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G PG GP E PG +RGP G G QG+K +G E PG
Sbjct: 1336 DGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAEG-PPG 1388
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/117 (37%), Positives = 52/117 (44%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG 120
PG E GP G KRGP G G G+K +G E GP K GP G + G
Sbjct: 1345 PGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAE--GPPGKT--GPVGPQGPSG 1400
Query: 121 -PGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGGLV 173
PG + RG PG E+G PG + GP G G K PG K E+ GL+
Sbjct: 1401 KPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL-KGDPGSKGEKGHPGLI 1456
Score = 101 (40.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/110 (39%), Positives = 47/110 (42%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGD-KEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
GDK E PG E PG E G G K ERG EK G GP K PGD
Sbjct: 1250 GDKGE--PG--EAGNPGPPGEAGSGGLKGERG----EKGEAGPPGAAGPAGI-KGPPGDD 1300
Query: 125 EKRG-PGDKEERG-PGDKEERGPGDKEERGQGDKEKRG-PGDKEERAPGG 171
+G PG G PG E GP ++ G GDK + G PG P G
Sbjct: 1301 GPKGNPGPVGFPGDPGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG 1349
Score = 99 (39.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 42/113 (37%), Positives = 51/113 (45%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG-PGDKEERGPGDREKRGPGDKEERGP-GDKEKRG-P 121
PG E GP ++ G GDK E G PG GP E PG +RGP G G
Sbjct: 1315 PGPPGEPGPAGQDGVG-GDKGEDGDPGQPGPPGPSG-EAGPPGPPGKRGPPGASGSEGRQ 1372
Query: 122 GDKEKRGPGDKEERGPGDKEERGP-GDKEERGQ-GDKEKRG-PGDKEERA-PG 170
G+K +G E GP K GP G + G+ G + RG PG E+ PG
Sbjct: 1373 GEKGAKGEAGAE--GPPGKT--GPVGPQGPSGKPGPEGLRGIPGPVGEQGLPG 1421
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 6 GERASDKEERGPGDKEERGP----GDKKARGP 33
GE+ + PG + +RGP G + ARGP
Sbjct: 863 GEKGARGIAGKPGPRGQRGPTGPRGSRGARGP 894
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E GP G +GP
Sbjct: 1126 KGEIGEPGQKGSKGDKGENGPPGPPGLQGP 1155
Score = 44 (20.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+G+R D PGDK RG ++ +GP
Sbjct: 595 KGDRGFDGLPGLPGDKGHRG--ERGPQGP 621
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 14 ERG-PGDKEERGP-GDKKARGP 33
E+G PG+K +GP G +GP
Sbjct: 1086 EKGAPGEKGPQGPAGRDGVQGP 1107
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
RGER PGD RG G+ RG
Sbjct: 613 RGERGPQGPPGLPGDDGMRGEDGEIGPRG 641
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 6 GERASDKEERGPGDKEERGPGDKKA-RG 32
G++ E PG E G G K RG
Sbjct: 1250 GDKGEPGEAGNPGPPGEAGSGGLKGERG 1277
Score = 36 (17.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD +RGP
Sbjct: 463 PGDPGDRGP 471
Score = 35 (17.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
G + + + PG ERGP + +GP
Sbjct: 899 GPKGTSGGDGPPGPPGERGP--QGPQGP 924
Score = 34 (17.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GER + PG K GP + +GP
Sbjct: 1028 GERGLPGAQGAPGLKGGEGP--QGPQGP 1053
>UNIPROTKB|E1BGC5 [details] [associations]
symbol:YLPM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032204 "regulation of telomere maintenance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] InterPro:IPR026314
GO:GO:0005634 OMA:QSYLAPT PANTHER:PTHR13413
GeneTree:ENSGT00440000039837 EMBL:DAAA02029614 IPI:IPI00693842
Ensembl:ENSBTAT00000010906 Uniprot:E1BGC5
Length = 1660
Score = 116 (45.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 43/119 (36%), Positives = 54/119 (45%)
Query: 65 PGDKEERGPGD---KEKRGPGDKEERGP---GDKEERGPGDREKRGPGDKEERGP---GD 115
PG E+ PG + RG ERGP +ERGP R PG +E P G
Sbjct: 601 PGSTREKVPGGLQGSQDRGRAGSRERGPPRRAGSQERGP----PRRPGSRERVPPRRAGS 656
Query: 116 KEK---RGPGDKEKRGPGDKE---ERGPGDKEERGPGDKEERGQGDKEKRGPGDK-EER 167
+E+ RGPG +E RG G E +RGP E G+K D+ R P + EER
Sbjct: 657 RERGLPRGPGGRE-RGLGRPEFGRDRGPFRPEPGDGGEKMYPYHRDEPPRAPWNHGEER 714
Score = 102 (41.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 39/118 (33%), Positives = 51/118 (43%)
Query: 66 GDKEERGPGDKEKRGPGDK---EERGPGDKEERGPGDREKRG---PGDKEERGPGD---K 116
G GPG ++ DK +K RG G R+ RG PG E+ PG
Sbjct: 557 GQAISHGPGLIKQEDFRDKMMGRREDSREKMSRGEGSRD-RGLVRPGSTREKVPGGLQGS 615
Query: 117 EKRGPGDKEKRGP---GDKEERGPGDKEERGPGDKEE---RGQGDKEK---RGPGDKE 165
+ RG +RGP +ERGP R PG +E R G +E+ RGPG +E
Sbjct: 616 QDRGRAGSRERGPPRRAGSQERGP----PRRPGSRERVPPRRAGSRERGLPRGPGGRE 669
Score = 41 (19.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 5 RGERASDKEERGPGDKEERGPG 26
RGE + D+ PG E+ PG
Sbjct: 589 RGEGSRDRGLVRPGSTREKVPG 610
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 6 GERASDKEERGPGDKEERGPGDK 28
G + S RGPG DK
Sbjct: 527 GNQGSSSSYRGPGQSRMEDTRDK 549
Score = 33 (16.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 7 ERASDKEERGPGDKEERGP 25
E SD ++ P + GP
Sbjct: 414 ENLSDSQQEPPKSEVSEGP 432
>ZFIN|ZDB-GENE-100119-2 [details] [associations]
symbol:col27a1b "collagen, type XXVII, alpha 1b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IGI] [GO:0048570 "notochord
morphogenesis" evidence=IGI] [GO:0030282 "bone mineralization"
evidence=IGI] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-100119-2 GO:GO:0046872
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0001501 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025
GO:GO:0030282 Pfam:PF02210 GO:GO:0005201 HOGENOM:HOG000085654
KO:K06236 SMART:SM00210 HOVERGEN:HBG098141 OrthoDB:EOG4FBHSB
GO:GO:0048570 EMBL:EF032484 IPI:IPI00507446 RefSeq:NP_001074044.1
UniGene:Dr.115130 ProteinModelPortal:A0MSJ1 GeneID:560145
KEGG:dre:560145 CTD:560145 InParanoid:A0MSJ1 NextBio:20883309
Uniprot:A0MSJ1
Length = 1658
Score = 115 (45.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 43/124 (34%), Positives = 59/124 (47%)
Query: 66 GDKEERGP-GDKEKRGP-GDKEERGPGDKEERGPGDREKRGP-GDKEERG-PGDKEKRG- 120
G + +GP G GP G+K E+G K E PG GP G++ +RG PGD G
Sbjct: 1108 GYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGYPGL 1167
Query: 121 ---PGDKEKRG----PGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRG-PGDKEERAP 169
G++ K G PG+ RG PG K +G G K + +G+ RG PG P
Sbjct: 1168 EGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGSPGPVGVPGP 1227
Query: 170 GGLV 173
G++
Sbjct: 1228 RGVI 1231
Score = 42 (19.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARG 32
+G++ PGD+ RGP G A+G
Sbjct: 507 KGQKGHPGPSGHPGDQGIRGPDGSPGAKG 535
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 17 PGDKEERG-------PGDKKARGP 33
PG K ++G PGD+ RGP
Sbjct: 504 PGRKGQKGHPGPSGHPGDQGIRGP 527
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 17 PGDKEERGP 25
PGD ERGP
Sbjct: 591 PGDFGERGP 599
Score = 33 (16.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 9/25 (36%), Positives = 9/25 (36%)
Query: 5 RGERASDKEERGPGDKEERGPGDKK 29
RG R PG GP KK
Sbjct: 450 RGPRGPSGPHGKPGPPGTPGPKGKK 474
>ZFIN|ZDB-GENE-070117-2447 [details] [associations]
symbol:gon4l "gon-4-like (C.elegans)" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 InterPro:IPR009057
Pfam:PF02671 PROSITE:PS51477 ZFIN:ZDB-GENE-070117-2447
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:54856 OMA:CACSCHE Gene3D:1.20.1160.11
SUPFAM:SSF47762 GeneTree:ENSGT00390000016256 EMBL:CR848841
IPI:IPI00799877 RefSeq:NP_001188464.1 UniGene:Dr.75736
Ensembl:ENSDART00000088023 Ensembl:ENSDART00000124238 GeneID:555764
KEGG:dre:555764 NextBio:20881151 Uniprot:F1QI87
Length = 2055
Score = 131 (51.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 83 DKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGD--K 140
D + GD++E+ EK+ G++E R + ++ E +G G+K E G GD +
Sbjct: 1311 DVHKHSSGDEKEQQSSGGEKQNSGNEEGRAEESESRKDEAQDEDKG-GEKNEDGEGDGKR 1369
Query: 141 EERGPGDK-EERGQGDKEKRGPGDKEE 166
+E G GDK E GD EK G G+++E
Sbjct: 1370 DEGGSGDKGREEKDGDGEKDGDGERDE 1396
Score = 118 (46.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGD--KEKRGPGD 123
GD++E+ EK+ G++E R + + E +G G+K E G GD +++ G GD
Sbjct: 1318 GDEKEQQSSGGEKQNSGNEEGRAEESESRKDEAQDEDKG-GEKNEDGEGDGKRDEGGSGD 1376
Query: 124 K---EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEK 158
K EK G G+K+ G D+EE D ++ Q + E+
Sbjct: 1377 KGREEKDGDGEKDGDGERDEEEE---DFDDLTQDEDEE 1411
>ZFIN|ZDB-GENE-070501-8 [details] [associations]
symbol:col6a3 "collagen, type VI, alpha 3"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00131 SMART:SM00327 ZFIN:ZDB-GENE-070501-8 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:CR545476 IPI:IPI01023461
Ensembl:ENSDART00000138754 ArrayExpress:F1QKE8 Uniprot:F1QKE8
Length = 3733
Score = 119 (46.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 47/121 (38%), Positives = 58/121 (47%)
Query: 66 GDKEERGPGDKEKRGP-GDKEERGP-GDKEERG-PGDREKRGP-GDKEERGPGDKEKRG- 120
G+ RGPG + GP G+K RG G K E G PG + GP G + E G ++ G
Sbjct: 2795 GNPGPRGPGGQP--GPAGEKGRRGAVGRKGEPGEPGPKGVTGPFGPRGEPGEDGRDGFGF 2852
Query: 121 PGDKEKRG-------PGDKEERG-PGDKEERGPGDKEERGQ-GDKEKRG-PGDKEERA-P 169
PG K ++G PG K E G PG GPG + GQ G RG PG K + P
Sbjct: 2853 PGPKGRKGDEGFPGFPGPKGEAGDPGTNG--GPGPRGNNGQRGTSGVRGGPGQKGDIGYP 2910
Query: 170 G 170
G
Sbjct: 2911 G 2911
Score = 45 (20.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 6 GERASDKEERGPGDKEERGPGDKKARGP 33
GE D + GPG+ RG + RGP
Sbjct: 2729 GEPGVDGNKGGPGEPGRRGSDGR--RGP 2754
>UNIPROTKB|F1RZB7 [details] [associations]
symbol:LEO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0031442 "positive
regulation of mRNA 3'-end processing" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0016593 "Cdc73/Paf1
complex" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001711 "endodermal cell
fate commitment" evidence=IEA] GO:GO:0005730 GO:GO:0045944
GO:GO:0006378 GO:GO:0019827 GeneTree:ENSGT00550000074952 KO:K15177
InterPro:IPR007149 Pfam:PF04004 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0031442 GO:GO:0016593 GO:GO:0001711
GO:GO:0045638 CTD:123169 OMA:NNGTMDL EMBL:CU855739
RefSeq:XP_003121552.1 UniGene:Ssc.7240 Ensembl:ENSSSCT00000005108
GeneID:100518760 KEGG:ssc:100518760 Uniprot:F1RZB7
Length = 666
Score = 116 (45.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/109 (32%), Positives = 51/109 (46%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEER--GPGDREKRGPGDKEERGP-GDKEKRGPG 122
G +++ D EK D EER G E++ D EK D EER D E++
Sbjct: 146 GGEDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLS 205
Query: 123 DKEKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEERAPG 170
++EK D++ + +E+ D EER Q D+EK D +ER G
Sbjct: 206 EEEKANSDDEQPAASDNDDEKQNSDDEERPQMSDEEKMQNSD-DERPQG 253
Score = 115 (45.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 67 DKEERGPG-DKEKRGPGDKEERGPG-DKEERGPGDREKRGPGDKEERGPGDKEKRGPGDK 124
D EER G D++K D +E+ D EER ++R +EE+ D E+ D
Sbjct: 163 DDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDEQPAASDN 222
Query: 125 E-KRGPGDKEERGPGDKEERGPGDKEERGQG-DKEKRGPGDKEER 167
+ ++ D EER EE+ +ER QG D+E R D+EE+
Sbjct: 223 DDEKQNSDDEERPQMSDEEKMQNSDDERPQGSDEEHRHSEDEEEQ 267
Score = 103 (41.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDK--EERGPGDKEKRGPGDK 124
D E+ D E+R +ER +EE+ D E+ D E++ D+E+ D+
Sbjct: 181 DDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDEQPAASDNDDEKQNSDDEERPQMSDE 240
Query: 125 EKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
EK D E D+E R D+EE+ + RG ++E
Sbjct: 241 EKMQNSDDERPQGSDEEHRHSEDEEEQDHKSESARGSDSEDE 282
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 10 SDKEERGPGDKEER 23
SD EER G E++
Sbjct: 162 SDDEERAQGSDEDK 175
Score = 33 (16.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 10 SDKEERGPGDKEERGPG 26
SD E+ D EER G
Sbjct: 154 SDDEKIQNSDDEERAQG 170
>RGD|621351 [details] [associations]
symbol:Col1a2 "collagen, type I, alpha 2" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA;ISO] [GO:0005584 "collagen type
I" evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007179 "transforming growth factor beta receptor signaling
pathway" evidence=ISO] [GO:0007266 "Rho protein signal
transduction" evidence=ISO] [GO:0008217 "regulation of blood
pressure" evidence=ISO] [GO:0030199 "collagen fibril organization"
evidence=ISO] [GO:0030674 "protein binding, bridging" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043589
"skin morphogenesis" evidence=ISO] [GO:0046332 "SMAD binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
[GO:0070208 "protein heterotrimerization" evidence=ISO] [GO:0071230
"cellular response to amino acid stimulus" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
RGD:621351 GO:GO:0005615 GO:GO:0046872 GO:GO:0030199 GO:GO:0001501
GO:GO:0008217 GO:GO:0007179 GO:GO:0007266 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0001568
GO:GO:0071230 GO:GO:0005201 GO:GO:0043589 HOGENOM:HOG000085654
HOVERGEN:HBG004933 KO:K06236 GO:GO:0005584 PDB:3HQV PDB:3HR2
PDBsum:3HQV PDBsum:3HR2 Reactome:REACT_150387 CTD:1278
OrthoDB:EOG412M65 EMBL:AF121217 IPI:IPI00188921 RefSeq:NP_445808.1
UniGene:Rn.107239 IntAct:P02466 STRING:P02466 PRIDE:P02466
GeneID:84352 KEGG:rno:84352 UCSC:RGD:621351 InParanoid:P02466
EvolutionaryTrace:P02466 NextBio:616663 PMAP-CutDB:P02466
ArrayExpress:P02466 Genevestigator:P02466
GermOnline:ENSRNOG00000011292 Uniprot:P02466
Length = 1372
Score = 113 (44.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 46/120 (38%), Positives = 58/120 (48%)
Query: 66 GDKEERG-PGDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGPGDKEERGP-GDKEKRG 120
G ERG PG+ GP G + ERGP G+ GP G RGP GP G+K + G
Sbjct: 574 GKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAP--GPDGNKGEAG 631
Query: 121 ----PGDKEKRGPGDKEERGPGDKEERG-PGDKEERGQ-GDKEKRG-PG-DKEERAPGGL 172
PG GPG PG++ G PG K E+G+ G + + G PG D APG +
Sbjct: 632 AVGAPGSAGASGPGGL----PGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAI 687
Score = 108 (43.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 48/120 (40%), Positives = 52/120 (43%)
Query: 65 PGDKEERG-PGDKEKRG----PGDKEERGPGDKE-ERG-PGDREKRGP-GDKEERGP-GD 115
PG K ERG PG+ G PG GP K RG PG GP G RGP G
Sbjct: 948 PGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGP 1007
Query: 116 KEKRGPGDKEKRGPGDKEERG-PGDKEERG-PGDKEERG-QGDKEKRGP-GDKEERAPGG 171
+ RG +K PGDK RG PG K G G G GD+ GP G R P G
Sbjct: 1008 QGIRG----DKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAG 1063
Score = 42 (19.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 2 QACRGERASDKEERGPGDKEERG-PGDK 28
Q +GE + E PG RG PG++
Sbjct: 201 QGVKGEPGAPGENGTPGQAGARGLPGER 228
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 120 (47.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 67 DKEERGPGDKEKRGPGDKE-ERGPGDKEERGPGDREKRGPGDKEERGPG-DKEKRGPGDK 124
+++E+G +KEK E E+ G +EE+ + E GD EE+ DK K DK
Sbjct: 1591 EEKEKGKEEKEKTPESSSEAEKADGKQEEK---EEENAKSGDSEEKTDDTDKPKGSEADK 1647
Query: 125 EKR-GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
E G+K++ P +K + P E++GQ D++ G ++ + P G
Sbjct: 1648 ETSDAKGEKKDDEP-EKMDTTPVTDEKKGQKDEKDSGKTEEAGKLPNG 1694
Score = 38 (18.4 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 8 RASDKEERGPGDKEERGPGDK 28
+A KE +GP +++ P K
Sbjct: 247 KAKTKEGKGPNARKKSKPAPK 267
>RGD|1549772 [details] [associations]
symbol:Leo1 "Leo1, Paf1/RNA polymerase II complex component,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0001711 "endodermal cell fate commitment" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA;ISO;ISS] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA;ISO;ISS] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO;ISS] [GO:0031442 "positive regulation of mRNA
3'-end processing" evidence=IEA;ISO;ISS] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IEA;ISO;ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA;ISO] [GO:0045638 "negative regulation
of myeloid cell differentiation" evidence=IEA;ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO;ISS] RGD:1549772 GO:GO:0005730
GO:GO:0016055 GO:GO:0045944 GO:GO:0006378 GO:GO:0006351
GO:GO:0019827 eggNOG:NOG130430 GeneTree:ENSGT00550000074952
KO:K15177 InterPro:IPR007149 Pfam:PF04004 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0031442 GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 CTD:123169 HOGENOM:HOG000253934
HOVERGEN:HBG081913 OrthoDB:EOG4HQDJC OMA:NNGTMDL EMBL:BC082098
IPI:IPI00471640 RefSeq:NP_001005548.1 UniGene:Rn.43195
STRING:Q641X2 PhosphoSite:Q641X2 PRIDE:Q641X2
Ensembl:ENSRNOT00000013512 GeneID:300837 KEGG:rno:300837
UCSC:RGD:1549772 InParanoid:Q641X2 NextBio:647616
ArrayExpress:Q641X2 Genevestigator:Q641X2
GermOnline:ENSRNOG00000010116 Uniprot:Q641X2
Length = 678
Score = 115 (45.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 67 DKEERGPG-DKEK-RGPGDKEERGPG-DKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
D EER G D EK + D+EE+ D E+R + R +EE+G D E+ D
Sbjct: 174 DDEEREQGSDDEKLQNSADEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERPAASD 233
Query: 124 K-EKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEER 167
E++ D E+R EE+ +ER Q D+++R D+EE+
Sbjct: 234 NDEEKQNSDDEDRPQVSDEEKMQNSDDERPQVSDEDRRHSDDEEEQ 279
Score = 111 (44.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 67 DKEERGPG-DKEKRGPGDKEERGPGDKEERGPGDREKRGPGDK-EERGPGDKEKRGP-GD 123
D+EE+ D E R ++R +EE+G D E+ D EE+ D E R D
Sbjct: 192 DEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERPAASDNDEEKQNSDDEDRPQVSD 251
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+EK D E D++ R D+EE+ Q + RG ++E
Sbjct: 252 EEKMQNSDDERPQVSDEDRRHSDDEEEQDQKSESARGSDSEDE 294
Score = 35 (17.4 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 10 SDKEERGPGDKEER 23
SD EER G +E+
Sbjct: 173 SDDEEREQGSDDEK 186
Score = 33 (16.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 7 ERASDKEERGPGDKEE 22
E SD E+ P D ++
Sbjct: 92 EERSDHEDNEPSDVDQ 107
>UNIPROTKB|Q641X2 [details] [associations]
symbol:Leo1 "RNA polymerase-associated protein LEO1"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] RGD:1549772 GO:GO:0005730 GO:GO:0016055 GO:GO:0045944
GO:GO:0006378 GO:GO:0006351 GO:GO:0019827 eggNOG:NOG130430
GeneTree:ENSGT00550000074952 KO:K15177 InterPro:IPR007149
Pfam:PF04004 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0031442 GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 CTD:123169
HOGENOM:HOG000253934 HOVERGEN:HBG081913 OrthoDB:EOG4HQDJC
OMA:NNGTMDL EMBL:BC082098 IPI:IPI00471640 RefSeq:NP_001005548.1
UniGene:Rn.43195 STRING:Q641X2 PhosphoSite:Q641X2 PRIDE:Q641X2
Ensembl:ENSRNOT00000013512 GeneID:300837 KEGG:rno:300837
UCSC:RGD:1549772 InParanoid:Q641X2 NextBio:647616
ArrayExpress:Q641X2 Genevestigator:Q641X2
GermOnline:ENSRNOG00000010116 Uniprot:Q641X2
Length = 678
Score = 115 (45.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 67 DKEERGPG-DKEK-RGPGDKEERGPG-DKEERGPGDREKRGPGDKEERGPGDKEKRGPGD 123
D EER G D EK + D+EE+ D E+R + R +EE+G D E+ D
Sbjct: 174 DDEEREQGSDDEKLQNSADEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERPAASD 233
Query: 124 K-EKRGPGDKEERGPGDKEERGPGDKEERGQ-GDKEKRGPGDKEER 167
E++ D E+R EE+ +ER Q D+++R D+EE+
Sbjct: 234 NDEEKQNSDDEDRPQVSDEEKMQNSDDERPQVSDEDRRHSDDEEEQ 279
Score = 111 (44.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 67 DKEERGPG-DKEKRGPGDKEERGPGDKEERGPGDREKRGPGDK-EERGPGDKEKRGP-GD 123
D+EE+ D E R ++R +EE+G D E+ D EE+ D E R D
Sbjct: 192 DEEEKMQNTDDEDRAQLSDDDRQQLSEEEKGNSDDERPAASDNDEEKQNSDDEDRPQVSD 251
Query: 124 KEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
+EK D E D++ R D+EE+ Q + RG ++E
Sbjct: 252 EEKMQNSDDERPQVSDEDRRHSDDEEEQDQKSESARGSDSEDE 294
Score = 35 (17.4 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 10 SDKEERGPGDKEER 23
SD EER G +E+
Sbjct: 173 SDDEEREQGSDDEK 186
Score = 33 (16.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 7 ERASDKEERGPGDKEE 22
E SD E+ P D ++
Sbjct: 92 EERSDHEDNEPSDVDQ 107
>UNIPROTKB|E1BV70 [details] [associations]
symbol:LOC769405 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001711 "endodermal cell fate commitment"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006378
"mRNA polyadenylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0031442 "positive regulation of mRNA 3'-end processing"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] GO:GO:0005730 GO:GO:0045944
GO:GO:0006378 GeneTree:ENSGT00550000074952 KO:K15177
InterPro:IPR007149 Pfam:PF04004 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0031442 GO:GO:0016593 GO:GO:0045638 OMA:NNGTMDL
EMBL:AADN02045369 EMBL:AADN02045370 IPI:IPI00586576
RefSeq:XP_001232678.2 Ensembl:ENSGALT00000007481 GeneID:769405
KEGG:gga:769405 Uniprot:E1BV70
Length = 657
Score = 125 (49.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 43/116 (37%), Positives = 55/116 (47%)
Query: 66 GDKEERGPGDKEKRGPGDK------EERGPG-DKEER--GPGDREKRGPGDKEERGP--G 114
GD E+ + EK G DK EER D EER D EK D++ER
Sbjct: 134 GDGSEKAHSEDEKWGKEDKSDQSDDEERQQNSDDEERQQNSDDEEKAQNSDEDERPQMSD 193
Query: 115 DKEKRGPGDKEKRGPGDKEERGP-GDKEERGPGDKEERGQ-GDKEKRGPGDKEERA 168
D+E+ D+EK D EER D+E+ D +ER Q D+EK D +ERA
Sbjct: 194 DEERLQNSDEEKMQNSDDEERPQVSDEEKMQNSDDDERAQHSDEEKMQNSDDDERA 249
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 37/107 (34%), Positives = 49/107 (45%)
Query: 67 DKEER--GPGDKEKRGPGDKEERGP-GDKEER-GPGDREKRGPGDKEERGP-GDKEKRGP 121
D EER D+EK D++ER D EER D EK D EER D+EK
Sbjct: 166 DDEERQQNSDDEEKAQNSDEDERPQMSDDEERLQNSDEEKMQNSDDEERPQVSDEEKMQN 225
Query: 122 GDKEKRGP-GDKEERGPGDKEERGP-GDKEERGQGDKEKRGPGDKEE 166
D ++R D+E+ D +ER D+EE+ E D E+
Sbjct: 226 SDDDERAQHSDEEKMQNSDDDERAQRSDEEEQEHKSGESARGSDSED 272
Score = 106 (42.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/111 (30%), Positives = 49/111 (44%)
Query: 67 DKEER--GPGDKEKRGPGDKEERGPGDKEERGP---GDREKRGPGDKEERGPGDKEKRGP 121
D EER D+E++ D EE+ E+ P D E+ D+E+ D E+R
Sbjct: 157 DDEERQQNSDDEERQQNSDDEEKAQNSDEDERPQMSDDEERLQNSDEEKMQNSDDEERPQ 216
Query: 122 -GDKEKRGPGDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPG 170
D+EK D +ER D+E+ D +ER Q E+ E A G
Sbjct: 217 VSDEEKMQNSDDDERAQHSDEEKMQNSDDDERAQRSDEEEQEHKSGESARG 267
Score = 102 (41.0 bits), Expect = 0.00053, P = 0.00053
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 91 DKEERGPGDRE--KRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEERGPGDKEERGPGDK 148
+++ERG G E GD E+ + EK G DK + ++ ++ D+E + D
Sbjct: 117 EEDERGHGSDEGSHHSEGDGSEKAHSEDEKWGKEDKSDQSDDEERQQNSDDEERQQNSDD 176
Query: 149 EERGQGDKEKRGP--GDKEER 167
EE+ Q E P D EER
Sbjct: 177 EEKAQNSDEDERPQMSDDEER 197
Score = 35 (17.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 5 RGERASDKEERGPGDKEER 23
+ +++ D+E + D EER
Sbjct: 152 KSDQSDDEERQQNSDDEER 170
>WB|WBGene00010662 [details] [associations]
symbol:K08E3.2 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000535 Pfam:PF00635 PROSITE:PS50202 GO:GO:0005856
GO:GO:0005198 Gene3D:2.60.40.360 InterPro:IPR008962 SUPFAM:SSF49354
GeneTree:ENSGT00690000102102 EMBL:Z81568 eggNOG:NOG297942
PIR:T23451 RefSeq:NP_499837.1 UniGene:Cel.27258
ProteinModelPortal:Q9XUT1 SMR:Q9XUT1 EnsemblMetazoa:K08E3.2
GeneID:187158 KEGG:cel:CELE_K08E3.2 UCSC:K08E3.2 CTD:187158
WormBase:K08E3.2 InParanoid:Q9XUT1 OMA:GKEIEMA NextBio:934308
Uniprot:Q9XUT1
Length = 276
Score = 119 (46.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+KEE G+K+K DKEE+ KE++ D EK+ +++E E + +K++
Sbjct: 75 EKEEEEKGEKKKE---DKEEKKDDSKEDKKDEDHEKKKTAEEKENNEKKDENKNK-NKDE 130
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKR 159
R K+E+ +K+ER KEE+ K+ +
Sbjct: 131 RKDEKKDEKKDDEKDERNDEKKEEKKDDQKDDK 163
Score = 113 (44.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 75 DKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRGPGDKEE 134
+K+K +KEE G+K++ D+E++ KE++ D EK+ + EK K+E
Sbjct: 67 EKKKEKGEEKEEEEKGEKKKE---DKEEKKDDSKEDKKDEDHEKKKTAE-EKENNEKKDE 122
Query: 135 RGPGDKEERGPGDKEERGQGDKEKRGPGDKEER 167
+K+ER K+E+ +K++R KEE+
Sbjct: 123 NKNKNKDERKDEKKDEKKDDEKDERNDEKKEEK 155
>UNIPROTKB|F1RXW0 [details] [associations]
symbol:COL5A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0048592 "eye morphogenesis" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0043588
GO:GO:0030199 GO:GO:0001501 InterPro:IPR008160 Pfam:PF01391
GO:GO:0071230 GO:GO:0005201 GO:GO:0048592
GeneTree:ENSGT00660000095287 GO:GO:0005588 OMA:PDHKPVW
EMBL:CU467671 Ensembl:ENSSSCT00000017460 ArrayExpress:F1RXW0
Uniprot:F1RXW0
Length = 1269
Score = 119 (46.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 48/108 (44%), Positives = 56/108 (51%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERGP-GDKEERGP-GDREKRGP-GDKEERGP-GDKEKRG 120
PGD PG K + GP K E GP G + GP G+ KRGP GD GP G +RG
Sbjct: 237 PGDPGV--PGFKGEAGP--KGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERG 292
Query: 121 -PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRG-PG 162
PG+ RG PG GP G + ERGP G +G QGD + G PG
Sbjct: 293 APGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPG 337
Score = 111 (44.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 42/115 (36%), Positives = 48/115 (41%)
Query: 72 GPGDKEKRG----PGDKEERGP-GDKEERG----PGDREKRG-PGDKEERG-PGDKEKRG 120
GPGDK G PG GP G +RG PG R +RG PG G PG G
Sbjct: 734 GPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTG 793
Query: 121 -PGDKEKRGP-GDKEERGP-GDKEERGPGDKEERGQGDKEKRGPGDKEERAPGGL 172
PGDK GP G GP G+ GP + D GD+ + P GL
Sbjct: 794 APGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGL 848
Score = 106 (42.4 bits), Expect = 0.00015, P = 0.00015
Identities = 44/108 (40%), Positives = 54/108 (50%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDK-E 117
PG++ +RGP GD GP G ERG PG+ RG PG GP G + ERGP G
Sbjct: 267 PGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGP 323
Query: 118 KRGPGDKEKRG-PGDKEERG-PGDKEERGP-GDKEERGQ-GDKEKRGP 161
K G GD + G PG RG G+ +GP G G G+ + GP
Sbjct: 324 KGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGP 371
Score = 99 (39.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 46/127 (36%), Positives = 56/127 (44%)
Query: 65 PGDKEERGPGDKEKRGPGDKEERG----PGDKEERGP-G-DREKRGPGDKEERGPGDKEK 118
PG GP E+ PG++ E G PG+K G G D K PG PGD
Sbjct: 471 PGAVGPLGPRG-ERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGT--PGDTGP 527
Query: 119 RG----PGDKEKRG-PGDKEERGP-GDKEERGP-GDKEERGQ----GDKEKRGP-GDKEE 166
G PG++ G PG K +RG G+K G G+ RG G GP G+K E
Sbjct: 528 PGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE 587
Query: 167 RAPGGLV 173
P GLV
Sbjct: 588 PGPRGLV 594
Score = 43 (20.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG++ +RGP GD GP
Sbjct: 267 PGEEGKRGPRGDPGTVGP 284
Score = 38 (18.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 14 ERG-PGDKEERG----PGDKKARG 32
ERG PG++ E G PG+K G
Sbjct: 482 ERGNPGERGEPGITGLPGEKGMAG 505
>UNIPROTKB|P20849 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001894 "tissue homeostasis" evidence=IEA] [GO:0003417 "growth
plate cartilage development" evidence=IEA] [GO:0005594 "collagen
type IX" evidence=IDA;TAS] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0030020 "extracellular matrix
structural constituent conferring tensile strength" evidence=IC]
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0046872 GO:GO:0030198 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
GO:GO:0005788 GO:GO:0001894 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025 GO:GO:0002062
HOVERGEN:HBG004933 GO:GO:0030020 SMART:SM00210 OrthoDB:EOG4P2Q36
EMBL:X54412 EMBL:X54413 EMBL:AF036130 EMBL:AF036110 EMBL:AF036111
EMBL:AF036112 EMBL:AF036113 EMBL:AF036114 EMBL:AF036115
EMBL:AF036116 EMBL:AF036117 EMBL:AF036118 EMBL:AF036119
EMBL:AF036120 EMBL:AF036121 EMBL:AF036122 EMBL:AF036123
EMBL:AF036124 EMBL:AF036125 EMBL:AF036126 EMBL:AF036127
EMBL:AF036128 EMBL:AF036129 EMBL:AL080275 EMBL:AL160262
EMBL:BC015409 EMBL:BC063646 EMBL:M32137 EMBL:M32133 EMBL:M32135
IPI:IPI00295999 IPI:IPI00645204 IPI:IPI00874229 PIR:S13580
PIR:S13581 RefSeq:NP_001842.3 RefSeq:NP_511040.2 UniGene:Hs.590892
PDB:2UUR PDBsum:2UUR ProteinModelPortal:P20849 SMR:P20849
STRING:P20849 PhosphoSite:P20849 DMDM:296439373 PaxDb:P20849
PRIDE:P20849 DNASU:1297 Ensembl:ENST00000320755
Ensembl:ENST00000357250 Ensembl:ENST00000370496 GeneID:1297
KEGG:hsa:1297 UCSC:uc003pff.4 UCSC:uc003pfg.4 CTD:1297
GeneCards:GC06M070924 HGNC:HGNC:2217 MIM:120210 MIM:614134
MIM:614135 neXtProt:NX_P20849 Orphanet:250984 Orphanet:166002
PharmGKB:PA26733 InParanoid:P20849 KO:K08131 OMA:GFCEPAS
PhylomeDB:P20849 ChiTaRS:COL9A1 EvolutionaryTrace:P20849
GenomeRNAi:1297 NextBio:5265 ArrayExpress:P20849 Bgee:P20849
Genevestigator:P20849 GermOnline:ENSG00000112280 GO:GO:0005594
GO:GO:0003417 Uniprot:P20849
Length = 921
Score = 106 (42.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 46/126 (36%), Positives = 61/126 (48%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG----PGDKEERG-PGDREKRG-PGDKEERG-PGD 115
PGD+ +RGP G+ +G G + RG PG K + G PG + G PG +G PG
Sbjct: 501 PGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPG- 559
Query: 116 KEKRGP-GDKEKRG----PGDKEERG-PGDKEERG-PGDKEERGQGDKE-KRGP-GDKEE 166
K GP GD +G PG +G G+K G PG + G K ++GP G+
Sbjct: 560 --KPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGP 617
Query: 167 RAPGGL 172
R P GL
Sbjct: 618 RGPQGL 623
Score = 45 (20.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PGDKKARGP 33
+GE+ + + PG + G PGD+ RGP
Sbjct: 480 KGEKGARGLDGEPGPQGLPGAPGDQGQRGP 509
>UNIPROTKB|I3LUR7 [details] [associations]
symbol:COL6A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00131 SMART:SM00327
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022 OMA:GRHANTK
EMBL:CU550682 EMBL:CU570741 Ensembl:ENSSSCT00000028799
Uniprot:I3LUR7
Length = 3170
Score = 116 (45.9 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 45/124 (36%), Positives = 61/124 (49%)
Query: 65 PGDKEERG-PGDKEKRGP-GDKEERGP----GDKEERGPGDREKRGP-GDKEERGP-G-- 114
PG ++G PG + +GP GDK ERG GD + G D ++RGP G+ + GP G
Sbjct: 2124 PGTSGDKGSPGRRGDKGPKGDKGERGDVGIRGDPGDTGR-DSQQRGPKGESGDLGPMGLP 2182
Query: 115 --DKEKRGPGDKEKRGPGDKEERGP-GDKEERG-PGDKEERG-QGDKEKRGPGDKEERAP 169
D PG+ K G + RGP G K +G PG + G QG + +GP P
Sbjct: 2183 GRDGVSGSPGEPGKSGGFGR--RGPAGLKGNKGGPGQQGSVGEQGTRGAQGPPGPT--GP 2238
Query: 170 GGLV 173
GL+
Sbjct: 2239 PGLI 2242
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/123 (37%), Positives = 60/123 (48%)
Query: 66 GDKEERG-PGDKEKRGP-------GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGPG 114
G K RG PG+K + G G+ ++G PG ++G PG R +GP GDK ERG
Sbjct: 2092 GIKGSRGFPGEKGELGEIGLDGLDGEDGDKGLPGTSGDKGSPGRRGDKGPKGDKGERG-- 2149
Query: 115 DKEKRG-PGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAP 169
D RG PGD + D ++RGP G+ + GP G G G + G G R P
Sbjct: 2150 DVGIRGDPGDTGR----DSQQRGPKGESGDLGPMGLPGRDGVSGSPGEPGKSGGFGRRGP 2205
Query: 170 GGL 172
GL
Sbjct: 2206 AGL 2208
Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
Identities = 45/115 (39%), Positives = 58/115 (50%)
Query: 66 GDKEERGP-GDKEKRG-PGDKEERG-PGDKEERGPGDREKRGP-GDKEERG-PGDKEKRG 120
G + +RGP G +G PG+ RG PGD E GPG+R G G + +G PG +
Sbjct: 2038 GQRGDRGPIGSIGPKGIPGEDGYRGYPGD--EGGPGERGPPGMNGTQGFQGCPGQR---- 2091
Query: 121 PGDKEKRG-PGDKEERGP-G-DKEERGPGDKEERG-QGDKEKRGPGDKEERAPGG 171
G K RG PG+K E G G D + GDK G GDK PG + ++ P G
Sbjct: 2092 -GIKGSRGFPGEKGELGEIGLDGLDGEDGDKGLPGTSGDKGS--PGRRGDKGPKG 2143
Score = 106 (42.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 44/118 (37%), Positives = 58/118 (49%)
Query: 65 PGDKEERG----PGDKEKRGP-GDKEERG-PGDKEERGPGDREKRGP-GDKEERGPGDKE 117
PG + G PG++ + GP G K + G PG K G G R RG GD G G +
Sbjct: 2248 PGPRGSGGTAGAPGERGRTGPLGRKGDPGEPGPKG--GLGSRGPRGETGDDGRDGVGSEG 2305
Query: 118 KRGPGDKEKRG-PGDKEERG-PGDK-EERGPGDKEERGQ-GDKEKRG-PGDKEERAPG 170
+RG K +RG PG +G PG+ + GPG K RG+ G+ G G K + PG
Sbjct: 2306 RRGK--KGERGFPGYPGPKGNPGEPGTDGGPGPKGVRGRRGNSGPPGIAGQKGD--PG 2359
Score = 46 (21.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 2 QACRGERASDKEERG-PGDKEERG 24
Q C G+R K RG PG+K E G
Sbjct: 2085 QGCPGQRGI-KGSRGFPGEKGELG 2107
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 6 GERASDKEERGP-GDKEERGP 25
G+ D ++RGP G+ + GP
Sbjct: 2158 GDTGRDSQQRGPKGESGDLGP 2178
Score = 38 (18.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 6 GERASDKEERGPGDKEERGP 25
G R +E GPG ERGP
Sbjct: 2059 GYRGYPGDEGGPG---ERGP 2075
>GENEDB_PFALCIPARUM|PFD0207c [details] [associations]
symbol:PFD0207c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000156 SMART:SM00160
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351355.1
ProteinModelPortal:Q8I1Y6 PRIDE:Q8I1Y6
EnsemblProtists:PFD0207c:mRNA GeneID:812454 KEGG:pfa:PFD0207c
EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP ProtClustDB:CLSZ2433358
Uniprot:Q8I1Y6
Length = 639
Score = 123 (48.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K ++ D+ R D+EE D+EE + E+ D+EE D+E+ D+E+
Sbjct: 133 KNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEE 192
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D++E D++E D++E + + + G D EE
Sbjct: 193 DEEDEDEEDEEDEDEEDEEDEDEEDEEENDDNGNDDGEE 231
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+ R D+E+ D+EE ++EE D E+ D+EE D+E+ D+++
Sbjct: 140 DENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDE 199
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D++E D++E + ++ G D E+ +K++
Sbjct: 200 EDEEDEDEEDEEDEDEEDEEENDDNGNDDGEENDDNEKDD 239
Score = 117 (46.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+ + K K+ D+ R D+EE D E+ ++EE D+E+ D+E+
Sbjct: 124 EKKRKKELKKNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEE 183
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
D+EE D++E D+E+ + D+E D+EE G
Sbjct: 184 EDEEDEEEEDEEDEDEE---DEEDEDEEDEEDEDEEDEEENDDNG 225
Score = 114 (45.2 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+EE ++E+ D+EE D+EE D E+ D++E D+++ D+++
Sbjct: 156 DEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDEEDEEDEDE 215
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQG-DKEKRGPGDKE 165
+ ++ G D EE +K++ + D E+ D+E
Sbjct: 216 EDEEENDDNGNDDGEENDDNEKDDDDEEKDDEEENDDDEE 255
Score = 106 (42.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
++EE D+E+ D+EE D+EE D ++ D++E D+++ + +
Sbjct: 164 EEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDEEDEEDEDEEDEEENDD 223
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G D EE +K++ +K++ + D ++ D+ +
Sbjct: 224 NGNDDGEENDDNEKDDDDE-EKDDEEENDDDEENDDDEND 262
Score = 102 (41.0 bits), Expect = 0.00052, P = 0.00052
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 69 EERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRG 128
EE ++K +K+ + K ++ D R D+EE D+E+ ++E+
Sbjct: 110 EETKKTIQKKSNVKEKKRKKELKKNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEE 169
Query: 129 PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+EE D+EE D+EE + D+++ D++E
Sbjct: 170 EEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDE 207
Score = 33 (16.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 9 ASDKEERGPGDKEE 22
A D+EE D+EE
Sbjct: 146 AEDEEEEEDEDEEE 159
>UNIPROTKB|Q8I1Y6 [details] [associations]
symbol:PFD0207c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000156 SMART:SM00160 GO:GO:0046907
EMBL:AL844503 RefSeq:XP_001351355.1 ProteinModelPortal:Q8I1Y6
PRIDE:Q8I1Y6 EnsemblProtists:PFD0207c:mRNA GeneID:812454
KEGG:pfa:PFD0207c EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP
ProtClustDB:CLSZ2433358 Uniprot:Q8I1Y6
Length = 639
Score = 123 (48.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
K ++ D+ R D+EE D+EE + E+ D+EE D+E+ D+E+
Sbjct: 133 KNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEE 192
Query: 128 GPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D++E D++E D++E + + + G D EE
Sbjct: 193 DEEDEDEEDEEDEDEEDEEDEDEEDEEENDDNGNDDGEE 231
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+ R D+E+ D+EE ++EE D E+ D+EE D+E+ D+++
Sbjct: 140 DENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDE 199
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D++E D++E + ++ G D E+ +K++
Sbjct: 200 EDEEDEDEEDEEDEDEEDEEENDDNGNDDGEENDDNEKDD 239
Score = 117 (46.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
+K+ + K K+ D+ R D+EE D E+ ++EE D+E+ D+E+
Sbjct: 124 EKKRKKELKKNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEEEDEEDEEE 183
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERAPGG 171
D+EE D++E D+E+ + D+E D+EE G
Sbjct: 184 EDEEDEEEEDEEDEDEE---DEEDEDEEDEEDEDEEDEEENDDNG 225
Score = 114 (45.2 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
D+EE ++E+ D+EE D+EE D E+ D++E D+++ D+++
Sbjct: 156 DEEEEEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDEEDEEDEDE 215
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQG-DKEKRGPGDKE 165
+ ++ G D EE +K++ + D E+ D+E
Sbjct: 216 EDEEENDDNGNDDGEENDDNEKDDDDEEKDDEEENDDDEE 255
Score = 106 (42.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEK 126
++EE D+E+ D+EE D+EE D ++ D++E D+++ + +
Sbjct: 164 EEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDEEDEEDEDEEDEEENDD 223
Query: 127 RGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
G D EE +K++ +K++ + D ++ D+ +
Sbjct: 224 NGNDDGEENDDNEKDDDDE-EKDDEEENDDDEENDDDEND 262
Score = 102 (41.0 bits), Expect = 0.00052, P = 0.00052
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 69 EERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKRG 128
EE ++K +K+ + K ++ D R D+EE D+E+ ++E+
Sbjct: 110 EETKKTIQKKSNVKEKKRKKELKKNKKVTSDENVRNAEDEEEEEDEDEEEEEEDEEEEEE 169
Query: 129 PGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEE 166
D+EE D+EE D+EE + D+++ D++E
Sbjct: 170 EEDEEEEDEEDEEEEDEEDEEEEDEEDEDEEDEEDEDE 207
Score = 33 (16.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 9 ASDKEERGPGDKEE 22
A D+EE D+EE
Sbjct: 146 AEDEEEEEDEDEEE 159
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 115 (45.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/103 (33%), Positives = 57/103 (55%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKR-GPGDKE 125
++EE D+E + +K E G DK+E+G D ++ G+ E+G KEK G ++
Sbjct: 105 NEEEDQKEDEEDQNE-EKGEAGKEDKDEKGEEDGKEDKNGN--EKGEDAKEKEDGKKGED 161
Query: 126 KRGPG-DKEERGPGDKEERGPGDKEERGQGDKEKRGP--GDKE 165
+G G D +E+G +KEE D++E G G + + G GDK+
Sbjct: 162 GKGNGEDGKEKGEDEKEEE---DRKETGDGKENEDGKEKGDKK 201
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREK--RGPGDKEERGPGDKEKRGPGDK 124
D E+G G+K++ + + KE+ + EK G DK+E+G E+ G DK
Sbjct: 87 DATEKG-GEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKG----EEDGKEDK 141
Query: 125 EKRGPG-DKEERGPGDKEERGPG---DKEERGQGDKE---KRGPGDKEERAPG 170
G D +E+ G K E G G D +E+G+ +KE ++ GD +E G
Sbjct: 142 NGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDG 194
>RGD|70920 [details] [associations]
symbol:Col5a1 "collagen, type V, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005581 "collagen" evidence=ISO] [GO:0005588 "collagen type V"
evidence=ISO;TAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008201 "heparin binding"
evidence=ISO;IDA] [GO:0016477 "cell migration" evidence=ISO]
[GO:0030199 "collagen fibril organization" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0032964 "collagen
biosynthetic process" evidence=ISO] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=ISO] [GO:0035989 "tendon
development" evidence=ISO] [GO:0043206 "extracellular fibril
organization" evidence=ISO] [GO:0043394 "proteoglycan binding"
evidence=ISO] [GO:0043588 "skin development" evidence=ISO]
[GO:0045112 "integrin biosynthetic process" evidence=ISO]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0048592 "eye morphogenesis" evidence=ISO] [GO:0051128
"regulation of cellular component organization" evidence=ISO]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:70920 GO:GO:0043588 GO:GO:0003007 GO:GO:0030199
GO:GO:0008201 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035313 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0001568 GO:GO:0005604 GO:GO:0032964
GO:GO:0043206 Pfam:PF02210 GO:GO:0005201 GO:GO:0048592
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 CTD:1289
OrthoDB:EOG49GKHM GO:GO:0005588 GO:GO:0045112 GO:GO:0051128
SMART:SM00210 EMBL:AF272662 IPI:IPI00201608 RefSeq:NP_604447.1
UniGene:Rn.117 ProteinModelPortal:Q9JI03 IntAct:Q9JI03 STRING:Q9JI03
PRIDE:Q9JI03 GeneID:85490 KEGG:rno:85490 UCSC:RGD:70920
InParanoid:Q9JI03 NextBio:617576 ArrayExpress:Q9JI03
Genevestigator:Q9JI03 GermOnline:ENSRNOG00000008749 Uniprot:Q9JI03
Length = 1840
Score = 114 (45.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/128 (37%), Positives = 63/128 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERG-PGDKEERG-PGDREKRGP-GDKEERGP-GDKEK 118
PG + +G G + +G G+K E G PG K + G GDR + GP G + E GP G K +
Sbjct: 791 PGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGR 850
Query: 119 RGP-GDKEKRGP-GDKEERG----PGDKEERGP-GDKEERG----QGDKEKRG----PGD 163
GP GD GP G+K + G PG +GP G G G+K RG PG
Sbjct: 851 GGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP 910
Query: 164 KEERAPGG 171
+ +R P G
Sbjct: 911 RGQRGPTG 918
Score = 112 (44.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 65 PGDKEERGP-GDKEKRGP-GDKEERGP-GDKEERGP-GDREKRGP-GDKEERG-PGDKEK 118
PG + +RGP G + +RGP G + GP G+ GP G +RGP G + G PG K
Sbjct: 908 PGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP 967
Query: 119 RGPGDKEKRGPGDKEERGP-GDKEERGP-GDKEERG-QGDKEKRGP-GDKEERAPGG 171
GP K+ PG +RG G + + GP G G QG + GP G++ P G
Sbjct: 968 PGPPGKDGL-PGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPG 1023
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 44/114 (38%), Positives = 52/114 (45%)
Query: 65 PGDKEERGPGDKEKRG-PGDKEERG-PGDKEERGPGDREKRGPGDKEERG-PGDKEKRGP 121
PG K PGD +G PG G PG E GP ++ PGDK + G PG GP
Sbjct: 1325 PGPKGP--PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGP-PGDKGDDGEPGQTGSPGP 1381
Query: 122 -GDKEKRGP-GDKEERGPGDKEER-GP-GDKEERG-QGDKEKRGPGDKEERAPG 170
G+ GP G + GP E R G G K E G +G K GP + APG
Sbjct: 1382 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG-APG 1434
Score = 107 (42.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 43/124 (34%), Positives = 61/124 (49%)
Query: 65 PGDKEERGP----GDKEKRGPGDKEERGP-GDKEERGP-GDREKRG-PGDKEERGP-GDK 116
PGD+ GP G K GP GP G ERGP G G PG +GP G
Sbjct: 1061 PGDRGLPGPVGALGLKGSEGPPGPP--GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA 1118
Query: 117 EKRG-PGDKEKRGPGDKEE-RGP----GDKEERGP-GDKEERGQ-GDKEKRGP-GDKEER 167
++G PG++ +GP ++ +GP G GP G+ ++G+ G+ ++G GDK E+
Sbjct: 1119 GEKGVPGEEGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQ 1178
Query: 168 APGG 171
P G
Sbjct: 1179 GPPG 1182
Score = 48 (22.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GERASDKEERGPGDKEERGP-GDKKARGP 33
GE+ PG + +RGP G + RGP
Sbjct: 897 GEKGGRGTPGKPGPRGQRGPTGPRGERGP 925
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 5 RGERASDKEERGPGDKEERGP-GDKKARGP 33
+GE ++ GDK E+GP G +GP
Sbjct: 1160 KGEIGEPGQKGSKGDKGEQGPPGPTGPQGP 1189
Score = 45 (20.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 11 DKEERGP-GDKEERGPGDKKARG 32
D+ E GP G + E GP K RG
Sbjct: 829 DRGEIGPPGPRGEDGPEGPKGRG 851
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 5 RGERASDKEERGPGDKEERG-PG 26
+G+R D PG+K RG PG
Sbjct: 629 KGDRGFDGLAGLPGEKGHRGDPG 651
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 17 PGDKEERGP-GDKKARGP 33
PG + GP G+K +GP
Sbjct: 764 PGHPGKEGPPGEKGGQGP 781
Score = 33 (16.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 1 MQACRGERASDKEERGPGDKEERGP 25
M G +E PG+K +GP
Sbjct: 757 MPGADGPPGHPGKEGPPGEKGGQGP 781
>UNIPROTKB|G1K238 [details] [associations]
symbol:COL4A1 "Collagen alpha-1(IV) chain" species:9913
"Bos taurus" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 GO:GO:0007528 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
UniGene:Bt.32410 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:VAHGFLV EMBL:DAAA02034907
EMBL:DAAA02034908 EMBL:DAAA02034909 Ensembl:ENSBTAT00000035335
Uniprot:G1K238
Length = 1669
Score = 114 (45.2 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 47/117 (40%), Positives = 56/117 (47%)
Query: 66 GDKEERGPGDKEKRG-PGDKEERGPGDKEERG-PGDREKRGP-GDKEERG-PGDKEKRG- 120
GD RG +K ++G PG G G+K E G PG R K G G+K E+G PG G
Sbjct: 252 GDTAMRG--EKGQKGEPGFPGLPGFGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGDSGY 309
Query: 121 PGDKEKRG-PGDKEERGP----GDKEERGP-GDKEERGQGDKEKRGPGDKEERAPGG 171
PG + G G+K E GP G GP G+K E G GPG K E P G
Sbjct: 310 PGQPGQDGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPG----GPGAKGETGPKG 362
Score = 110 (43.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/123 (35%), Positives = 55/123 (44%)
Query: 65 PGDKEERGPGDKEKRGP-GDKEERG-------PGDKEERGPGDREKRGP-GDKEERG--- 112
PG E+G +GP G+K ++G PG + GD RG G K E G
Sbjct: 211 PGPPGEKGQMGLSFQGPKGEKGDQGVSGPPGLPGQAQVITKGDTAMRGEKGQKGEPGFPG 270
Query: 113 -PGDKEKRGPGDKEKRG-PGDKEERGPGDKEERG-PGDKEERGQGDKEKRGPGDKEERAP 169
PG EK PG RG PG E+G +K G PGD GQ ++ G+K E P
Sbjct: 271 LPGFGEKGEPGKPGPRGKPGKDGEKG--EKGSPGFPGDSGYPGQPGQDGL-KGEKGEAGP 327
Query: 170 GGL 172
GL
Sbjct: 328 PGL 330
Score = 107 (42.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 43/107 (40%), Positives = 50/107 (46%)
Query: 65 PGDKEERG-PGDKEKRG-PGDKEERG-PGDKEERGP-GDREKRGPGDKEERGPGDKEKRG 120
PG G PG K G PG RG PG K ++G G K G DK + G EK
Sbjct: 893 PGPAGVPGLPGAKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGD 952
Query: 121 PGDKEKRGP-GDKEERG-PGDKEERGPGDKEERGQ-GDKEKRGP-GD 163
G+K + GP GDK RG PG PG + GQ G + GP GD
Sbjct: 953 QGEKGQTGPTGDKGSRGDPGT-----PGVPGKDGQAGHPGQPGPKGD 994
Score = 42 (19.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 18 GDKEERG-PGDKKARGP 33
GD E G PG K RGP
Sbjct: 79 GDTGEPGLPGTKGTRGP 95
Score = 42 (19.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
GE+ GPG K E GP
Sbjct: 341 GEKGEPGYPGGPGAKGETGP 360
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 6 GERASDKEERGPGDKEERGP 25
G++ E PG K RGP
Sbjct: 76 GQKGDTGEPGLPGTKGTRGP 95
Score = 35 (17.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 5 RGERASDKEERGPGDKEERGPGDKKARGP 33
+GER PG + + GP GP
Sbjct: 582 KGERGPPGGVGFPGSRGDIGPPGPPGFGP 610
>UNIPROTKB|E1C077 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936 InterPro:IPR006018
Pfam:PF02029 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 IPI:IPI00822280 Ensembl:ENSGALT00000037472
ArrayExpress:E1C077 Uniprot:E1C077
Length = 739
Score = 108 (43.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 67 DKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDK----EERGPGDKEKRGPG 122
++ ER ++EKR ++ ER ++E + +RE+ ++ EER ++E++
Sbjct: 269 EERERAKAEEEKRA-AEERERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAE 327
Query: 123 DKEKRGPGDK--EERGPGDKEERGPGDKEERGQGDKEKRGPGDK 164
++ K K EER +KE + ++ ER + ++EKR +K
Sbjct: 328 ERAKAEEERKAAEERAKAEKERKA-AEERERAKAEEEKRAAEEK 370
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 66 GDKEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDK----EERGPGDKEKRGP 121
G++ DKEK + E+ +++ER + EK+ +K EE+ ++ +R
Sbjct: 216 GEQSITDAADKEKEEAEKEREKLEAEEKERLKAEEEKKAAEEKQKAEEEKKAAEERERAK 275
Query: 122 GDKEKRGPGDKEERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERA 168
++EKR ++ ER + EER ++ ER + ++E++ EERA
Sbjct: 276 AEEEKRA-AEERERAKAE-EERKAAEERERAKAEEERKAA---EERA 317
Score = 102 (41.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/103 (24%), Positives = 55/103 (53%)
Query: 68 KEERGPGDKEKRGPGDKEERGPGDKEERGPGDREKRGPGDKEERGPGDKEKRGPGDKEKR 127
+EE+ ++ +R ++E+R ++ ER + E++ ++ ER ++E++ ++ K
Sbjct: 262 EEEKKAAEERERAKAEEEKRA-AEERERAKAEEERKA-AEERERAKAEEERKAAEERAKA 319
Query: 128 GPGDK--EERGPGDKEERGPGDKEERGQGDKEKRGPGDKEERA 168
K EER ++E + EER + +KE++ ++ ERA
Sbjct: 320 EEERKAAEERAKAEEERKAA---EERAKAEKERKA-AEERERA 358
Score = 40 (19.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 1 MQACRGERASDKEERGPGDKEERGPGDKKA 30
++A ER +EE+ +++++ +KKA
Sbjct: 238 LEAEEKERLKAEEEKKAAEEKQKAEEEKKA 267
WARNING: HSPs involving 353 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.301 0.138 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 173 142 0.00091 102 3 12 24 0.44 33
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 603
No. of states in DFA: 216 (23 KB)
Total size of DFA: 49 KB (2058 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.99u 0.09s 16.08t Elapsed: 00:00:01
Total cpu time: 16.09u 0.10s 16.19t Elapsed: 00:00:01
Start: Thu Aug 15 14:51:10 2013 End: Thu Aug 15 14:51:11 2013
WARNINGS ISSUED: 2