Query psy14224
Match_columns 150
No_of_seqs 124 out of 464
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 22:35:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aqt_A Laminin subunit gamma-1 100.0 7.6E-48 2.6E-52 329.9 7.3 136 4-144 13-159 (375)
2 2y38_A Laminin subunit alpha-5 100.0 5.9E-45 2E-49 314.4 5.6 134 5-142 6-167 (403)
3 3tbd_A Netrin-G2, laminet-2; l 100.0 4.4E-44 1.5E-48 302.8 7.5 126 8-142 20-160 (338)
4 3zyj_B Netrin-G1; cell adhesio 100.0 7.6E-44 2.6E-48 309.0 9.0 126 8-142 48-188 (426)
5 4aqs_A Laminin subunit beta-1; 100.0 2.2E-43 7.7E-48 310.1 9.5 131 6-144 14-161 (525)
6 4a3z_A GH89_CBM32, alpha-N-ace 98.1 6.9E-06 2.4E-10 62.1 7.5 82 12-133 24-113 (161)
7 3lei_A Platelet aggregation fa 97.6 0.0001 3.5E-09 54.4 6.2 82 13-128 8-101 (153)
8 4gwi_A Lectinolysin, platelet 97.5 0.00017 5.9E-09 53.8 5.8 82 14-129 9-102 (153)
9 4a41_A GH89_CBM32-5, alpha-N-a 97.3 0.00021 7.1E-09 53.2 4.6 64 65-131 44-118 (161)
10 2jda_A Yecbm32; hypothetical p 97.3 0.00041 1.4E-08 49.4 5.5 59 64-131 22-89 (145)
11 4a4a_A Alpha-N-acetylglucosami 97.3 0.00057 1.9E-08 64.2 7.7 60 66-133 42-108 (914)
12 3eyp_A Putative alpha-L-fucosi 97.3 0.00025 8.4E-09 62.0 5.0 76 15-129 325-410 (469)
13 3f2z_A Uncharacterized protein 97.2 0.00047 1.6E-08 50.6 5.7 66 65-132 27-103 (159)
14 2yc2_A IFT25, intraflagellar t 97.1 0.00036 1.2E-08 51.1 3.8 60 63-129 24-90 (139)
15 3ggl_A Putative chitobiase; X- 97.1 0.00092 3.2E-08 49.7 5.7 66 65-132 37-113 (169)
16 1tvg_A LOC51668 protein; cell 97.0 0.00052 1.8E-08 51.5 4.2 60 63-129 32-98 (153)
17 2j1a_A Hyaluronidase, CBM32; p 96.9 0.0008 2.7E-08 47.7 3.7 64 65-130 25-99 (150)
18 3hnm_A Putative chitobiase; PS 96.8 0.0019 6.4E-08 49.2 5.5 68 64-134 37-119 (172)
19 1k12_A Lectin; beta barrel, pr 96.4 0.0049 1.7E-07 45.6 5.5 65 13-106 7-71 (158)
20 2y38_A Laminin subunit alpha-5 96.3 0.0012 4E-08 56.9 1.4 49 101-150 66-115 (403)
21 4aqt_A Laminin subunit gamma-1 96.3 0.0021 7.2E-08 54.7 3.0 50 101-150 55-109 (375)
22 4a42_A GH89_CBM32-4, alpha-N-a 96.2 0.0069 2.4E-07 44.4 5.4 57 66-129 41-104 (149)
23 2j1v_A Fucolectin-related prot 96.1 0.0063 2.2E-07 44.9 4.4 82 8-124 9-101 (151)
24 3cqo_A FBP32; F-lectin, fucole 95.7 0.025 8.7E-07 45.4 6.9 69 65-133 168-250 (293)
25 3cqo_A FBP32; F-lectin, fucole 95.6 0.011 3.7E-07 47.6 4.3 60 14-106 3-63 (293)
26 1w8o_A Bacterial sialidase; 3D 95.4 0.02 6.7E-07 49.8 5.7 65 65-130 477-553 (601)
27 2j22_A Fucolectin-related prot 95.1 0.025 8.5E-07 41.6 4.5 63 10-106 7-70 (148)
28 1k3i_A Galactose oxidase precu 94.8 0.041 1.4E-06 48.3 5.9 65 64-129 40-117 (656)
29 3zyj_B Netrin-G1; cell adhesio 94.1 0.023 7.7E-07 49.2 2.6 50 101-150 85-139 (426)
30 1jhj_A APC10; beta sandwich, j 94.0 0.027 9.3E-07 43.1 2.5 61 65-132 38-110 (171)
31 2v5d_A O-GLCNACASE NAGJ; famil 93.9 0.06 2E-06 49.2 5.0 67 64-132 611-688 (737)
32 2v72_A CBM32, EXO-alpha-sialid 93.2 0.073 2.5E-06 37.2 3.5 59 64-125 25-94 (143)
33 3ues_A Alpha-1,3/4-fucosidase; 93.1 0.06 2E-06 47.1 3.5 59 66-130 368-436 (478)
34 3tbd_A Netrin-G2, laminet-2; l 92.8 0.053 1.8E-06 45.6 2.7 26 125-150 86-111 (338)
35 1gqp_A DOC1/APC10; cell cycle, 91.4 0.16 5.5E-06 40.3 3.8 48 65-118 69-128 (221)
36 4aqs_A Laminin subunit beta-1; 88.9 0.14 4.9E-06 44.3 1.7 20 126-150 92-111 (525)
37 2zxq_A Endo-alpha-N-acetylgala 88.7 0.083 2.8E-06 51.5 0.0 66 64-130 1242-1321(1376)
38 2cho_A Glucosaminidase, hexosa 84.0 0.26 9E-06 45.0 0.7 61 66-129 603-671 (716)
39 2qqi_A Neuropilin-1; VEGF rece 80.7 3.1 0.00011 33.5 5.9 65 64-131 187-263 (318)
40 3bn6_A Lactadherin; anticoagul 75.0 1.5 5.1E-05 31.8 2.2 62 65-132 32-107 (158)
41 2w1s_A Hyaluronoglucosaminidas 72.8 6.5 0.00022 29.7 5.4 59 69-133 41-117 (192)
42 2qqm_A Neuropilin-1; VEGF rece 67.5 7 0.00024 32.8 5.0 65 64-131 319-395 (450)
43 2yfu_A Carbohydrate binding fa 65.7 6.6 0.00023 29.0 4.0 55 68-128 25-92 (155)
44 2qqj_A Neuropilin-2; VEGF rece 60.9 7.8 0.00027 31.2 3.9 61 65-131 33-107 (325)
45 4deq_A Neuropilin-1, vascular 60.3 13 0.00044 28.8 4.9 61 65-131 31-105 (218)
46 2qqi_A Neuropilin-1; VEGF rece 56.7 5.8 0.0002 31.9 2.4 61 65-131 32-106 (318)
47 1czt_A Protein (coagulation fa 56.0 5.9 0.0002 28.7 2.2 61 65-131 31-105 (160)
48 2qqj_A Neuropilin-2; VEGF rece 51.5 19 0.00066 28.8 4.8 65 65-132 189-271 (325)
49 2wuh_A Discoidin domain recept 47.2 14 0.00047 27.5 3.0 53 77-131 57-122 (178)
50 2qqo_A Neuropilin-2; VEGF rece 45.7 28 0.00097 29.2 5.1 65 65-132 318-400 (460)
51 2qqk_A Neuropilin-2; VEGF rece 45.6 24 0.00082 30.5 4.7 66 65-133 437-520 (579)
52 2ddu_A Reelin; beta-jelly-roll 44.2 29 0.001 29.5 4.9 37 94-130 81-117 (387)
53 2quo_A Heat-labIle enterotoxin 43.0 80 0.0027 21.8 6.6 65 65-149 24-100 (126)
54 2vm9_A Discoidin-2, discoidin 42.7 16 0.00054 28.7 2.9 49 77-131 49-107 (257)
55 3ecq_A Protein SPR0328, endo-a 37.0 7.2 0.00025 38.4 0.0 38 66-106 1470-1507(1531)
56 2ydt_A EXO-1,5-alpha-L-arabino 34.9 19 0.00066 29.8 2.3 22 110-131 53-74 (367)
57 2ydt_A EXO-1,5-alpha-L-arabino 31.9 17 0.00058 30.1 1.5 20 112-131 119-138 (367)
58 3a72_A EXO-arabinanase; arabin 31.9 18 0.00063 29.7 1.7 20 112-131 114-133 (355)
59 1sdd_B Coagulation factor V; c 28.7 72 0.0025 28.0 5.1 66 64-131 353-432 (647)
60 3a72_A EXO-arabinanase; arabin 27.9 30 0.001 28.4 2.3 21 111-131 49-69 (355)
61 3hny_M Coagulation factor VIII 26.0 18 0.00061 26.1 0.6 48 77-130 47-106 (159)
62 2r7e_B Coagulation factor VIII 25.1 71 0.0024 29.1 4.4 58 65-130 483-554 (770)
63 2e26_A Reelin, reeler protein; 23.3 59 0.002 29.8 3.5 18 113-130 450-467 (725)
64 2jkb_A Sialidase B; intramolec 21.2 37 0.0013 30.5 1.8 23 110-132 262-284 (686)
65 2sli_A Intramolecular trans-si 20.3 40 0.0014 30.3 1.8 21 111-131 242-262 (679)
No 1
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=100.00 E-value=7.6e-48 Score=329.86 Aligned_cols=136 Identities=24% Similarity=0.434 Sum_probs=122.2
Q ss_pred CCCCCCCCCCcccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccC---CCcee
Q psy14224 4 ELKVPGLFPPIFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQN---NMNWW 80 (150)
Q Consensus 4 ~~~~~~C~P~~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~---~~TwW 80 (150)
.-+|++|+|+|+|||+||+|.|+||||+ +||+||++++.... .++|++||++ +|.++||+++|+|.+ +.|||
T Consensus 13 ~~~p~~C~P~~~N~a~~~~i~assTCG~--~pe~yC~~~~~~~~-~~~C~~Cda~--~p~~~Hp~~~~~D~~~~~~~TwW 87 (375)
T 4aqt_A 13 GGRPQRCMPEFVNAAFNVTVVATNTCGT--PPEEYCVQTGVTGV-TKSCHLCDAG--QQHLQHGAAFLTDYNNQADTTWW 87 (375)
T ss_dssp TCCBCCCCCCCEETTTTCCCEESCCTTS--SCEEEECCC----C-CCCEEEECSS--STTTCCCGGGGSSCCCSSSCCCE
T ss_pred CCCcCccCCchhhhccCCeeeEecCCCC--CCcCeEEecCCccc-CCcCCccCCC--ChhhhCCHhheeccCCCCCCceE
Confidence 4689999999999999999999999996 89999999865432 4789999999 899999999999987 57999
Q ss_pred cCCcCCCCCCC-cceEEEeccCceeec-------cCCCCCCeeeeEeecCCCCcccccccccccCCCCCcee
Q psy14224 81 QSPTLHQGPQY-EYVTITLDMKQVCPH-------IDRRPSTIMCRRYALEQNNMNWWQSPTLHQGPQYEYVT 144 (150)
Q Consensus 81 QS~~~~~g~~~-~~VtItLdL~~~f~~-------~sprP~s~~iers~d~G~tw~pwQ~~s~~~~~~y~~v~ 144 (150)
||+++.+|.++ ++|||||||+++|+| .++||++|+||||+|+|+||+||||||.+|...|+.++
T Consensus 88 QS~~~~~~~~~~~~VtitLdL~~~f~~t~v~i~F~~~rP~~m~Iers~d~G~tw~p~qyfa~~C~~~f~~~~ 159 (375)
T 4aqt_A 88 QSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKAN 159 (375)
T ss_dssp ECCCGGGTCSSSCCEEEEEEEEEEEEEEEEEEEESSSCCSEEEEEEESSSSSCCEEEEEEETTHHHHHSCCT
T ss_pred ECCCccccCCCCcceEEEEcCCCeEEEEEEEEEecCCCCCcEEEEEecCCCCCccceeeeecchhHhcCCCC
Confidence 99999988887 589999999999995 79999999999999999999999999999998887553
No 2
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.9e-45 Score=314.36 Aligned_cols=134 Identities=31% Similarity=0.526 Sum_probs=93.2
Q ss_pred CCCCCCCCCcccccCCCceeeecccCCCCCC---------eeeeEeccCCC--------CCCCccccccCCCCCCCCCCC
Q psy14224 5 LKVPGLFPPIFNVASKSSIVVNATCGEVGGP---------EVYCKLKEHRG--------KADTQCSVCDASSSSPGKKHS 67 (150)
Q Consensus 5 ~~~~~C~P~~~NlA~gr~i~assTCG~~~~~---------e~yC~~~~~~~--------~~~~~C~~Cda~~~~~~~~Hp 67 (150)
...++|+|+|+|||+|++|.|++|||++ +| |+||++.+... ...++|++||++ +|.++||
T Consensus 6 ~~~~~c~P~~~Nla~~~~i~assTCG~~-~~~~~~~~p~~e~yC~~~~~~~~~~~~~~~~~~~~C~~Cda~--~p~~~Hp 82 (403)
T 2y38_A 6 GDGFSLHPPYFNLAEGARITASATCGEE-APTRSVSRPTEDLYCKLVGGPVAGGDPAQTIQGQYCDICTAA--NSNKAHP 82 (403)
T ss_dssp --CCCBCCCCEETTTTCEEEESSCC-----------------------------------------------------CC
T ss_pred ccCCccCCcccccccCCeeEEEeCCCCC-CCCccccCCcccccceeccCCcccccccccccCCccCccCCC--CccccCc
Confidence 4689999999999999999999999997 66 99999976321 123689999999 8999999
Q ss_pred ccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-------c-CCCCCCeeeeEeecCCCCccccccccc---cc
Q psy14224 68 IRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-------I-DRRPSTIMCRRYALEQNNMNWWQSPTL---HQ 136 (150)
Q Consensus 68 ~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-------~-sprP~s~~iers~d~G~tw~pwQ~~s~---~~ 136 (150)
+++|+|.+ .|||||+++.+|.++++|||||||+|+|+| + ||||++|+||||+|+|+||+||||||. +|
T Consensus 83 ~~~~~D~~-~twWQS~~~~~g~~~~~V~itLdL~~~f~~t~v~l~F~~spRP~~m~ierS~D~G~tW~p~qyfa~~~~dC 161 (403)
T 2y38_A 83 VSNAIDGT-ERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRDC 161 (403)
T ss_dssp GGGTTSSS-SCCEECCCSTTCSSTTCCEEEEEEEEEEEEEEEEEEECSSCCCSEEEEEEESSSSSSEEEEEEECSSHHHH
T ss_pred HHHhccCC-ceeeccCCccCCCccccceeEEeCCCcEEEEEEEEEecCCCCCCeEEEEeccCCCCCccceecccCCccch
Confidence 99999985 899999999999988899999999999995 4 999999999999999999999999997 78
Q ss_pred CCCCCc
Q psy14224 137 GPQYEY 142 (150)
Q Consensus 137 ~~~y~~ 142 (150)
...|+.
T Consensus 162 ~~~fg~ 167 (403)
T 2y38_A 162 LERFGP 167 (403)
T ss_dssp HHHTCT
T ss_pred hhhcCC
Confidence 777754
No 3
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=100.00 E-value=4.4e-44 Score=302.76 Aligned_cols=126 Identities=21% Similarity=0.347 Sum_probs=116.1
Q ss_pred CCCCCCcccccCCCceee---ecccCCCCCCeeeeEeccCCCCCCCcc-ccccCCCCCCCCCCCccceeccC---CCcee
Q psy14224 8 PGLFPPIFNVASKSSIVV---NATCGEVGGPEVYCKLKEHRGKADTQC-SVCDASSSSPGKKHSIRYVLEQN---NMNWW 80 (150)
Q Consensus 8 ~~C~P~~~NlA~gr~i~a---ssTCG~~~~~e~yC~~~~~~~~~~~~C-~~Cda~~~~~~~~Hp~~~ltD~~---~~TwW 80 (150)
++|+|+|+|||.|++|.+ ++|||. +||+||.+.+. ..| ++||++ +|+++||+++|+|.+ +.|||
T Consensus 20 ~~C~P~~~nla~~~~~~~~~~~sTCG~--~pe~yC~~~~~-----~~C~~~CDa~--~p~~aHP~~~ltD~~~~~~~TwW 90 (338)
T 3tbd_A 20 YACQPKVMRLKDYVKVKVEPSGITCGD--PPERFCSHENP-----YLCSNECDAS--NPDLAHPPRLMFDKEEEGLATYW 90 (338)
T ss_dssp CCBCCCCEEGGGGCEEEEESTTCBSCS--SCEEECCSSCC-----SSCCEEECTT--STTTCCCGGGGSSCCCTTCCCCE
T ss_pred cccCCCccchhcCeeEEeccCCCCcCc--ChhhheecCCc-----ccccccccCC--CccccCCHHHhccCCCCCCCcee
Confidence 799999999999999998 799996 89999998642 567 699999 899999999999986 79999
Q ss_pred cCCcCCCCCCCcceEEEeccCceeec--------cCCCCCCeeeeEeecCCCCcccccccccccCCCCCc
Q psy14224 81 QSPTLHQGPQYEYVTITLDMKQVCPH--------IDRRPSTIMCRRYALEQNNMNWWQSPTLHQGPQYEY 142 (150)
Q Consensus 81 QS~~~~~g~~~~~VtItLdL~~~f~~--------~sprP~s~~iers~d~G~tw~pwQ~~s~~~~~~y~~ 142 (150)
||+++.+++++.+|||||||+|.||| +||||++|+||||+|+|+||+||||||.+|...|+.
T Consensus 91 QS~~~~~~~~p~~VnlTL~L~k~felt~~iil~F~spRP~sm~ierS~D~G~tW~P~QYfA~dC~~~Fg~ 160 (338)
T 3tbd_A 91 QSITWSRYPSPLEANITLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGM 160 (338)
T ss_dssp EBCCSTTTTSCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSHHHHHSC
T ss_pred ccCcccCCCCCccceEEEcCCCeEEEEEEEEeecCCCCCCeEEEEeccCCCCCceeehhhhhhhHHhcCC
Confidence 99999988877899999999999985 899999999999999999999999999999888863
No 4
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=7.6e-44 Score=309.05 Aligned_cols=126 Identities=21% Similarity=0.348 Sum_probs=116.0
Q ss_pred CCCCCCcccccCCCceee---ecccCCCCCCeeeeEeccCCCCCCCcc-ccccCCCCCCCCCCCccceeccC---CCcee
Q psy14224 8 PGLFPPIFNVASKSSIVV---NATCGEVGGPEVYCKLKEHRGKADTQC-SVCDASSSSPGKKHSIRYVLEQN---NMNWW 80 (150)
Q Consensus 8 ~~C~P~~~NlA~gr~i~a---ssTCG~~~~~e~yC~~~~~~~~~~~~C-~~Cda~~~~~~~~Hp~~~ltD~~---~~TwW 80 (150)
++|+|+|+|||+|++|.+ +||||. +||+||++.+ ..+| ++||++ +|.++||+++|+|.+ +.|||
T Consensus 48 ~~C~P~~~n~a~~~~v~~~~assTCG~--~pe~yC~~~~-----~~~C~~~Cda~--~p~~aHp~~~~tD~~~~~~~twW 118 (426)
T 3zyj_B 48 MACQPESTDMTKYLKVKLDPPDITCGD--PPETFCAMGN-----PYMCNNECDAS--TPELAHPPELMFDFEGRHPSTFW 118 (426)
T ss_dssp BCCCCCCEEGGGTCEEEEESGGGBSCS--SCEECCCSSC-----TTCCCCEECSS--STTTCCCGGGGGSCC----CCCE
T ss_pred ccCCCcHHhHhcCCeeeeeccCcccCC--CccceeeccC-----CCcccCcccCC--CccccCCHHHeecCCCCCCCcee
Confidence 899999999999999985 999995 8999999754 3799 999999 899999999999996 68999
Q ss_pred cCCcCCCCCCCcceEEEeccCceeec--------cCCCCCCeeeeEeecCCCCcccccccccccCCCCCc
Q psy14224 81 QSPTLHQGPQYEYVTITLDMKQVCPH--------IDRRPSTIMCRRYALEQNNMNWWQSPTLHQGPQYEY 142 (150)
Q Consensus 81 QS~~~~~g~~~~~VtItLdL~~~f~~--------~sprP~s~~iers~d~G~tw~pwQ~~s~~~~~~y~~ 142 (150)
||+++.+++++.+|||||||+|+|+| +||||++|+||||+|+|+||+||||||.+|...|+.
T Consensus 119 QS~~~~~~~~p~~V~itLdL~~~f~~t~~i~l~F~spRP~am~ierS~D~G~tW~p~qYfA~dC~~~Fg~ 188 (426)
T 3zyj_B 119 QSATWKEYPKPLQVNITLSWSKTIELTDNIVITFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHM 188 (426)
T ss_dssp EBCCCCSCSSCCCEEEEEEEEEEEEECSCEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSHHHHTSC
T ss_pred cCCcccCCCCccceeEEEcCCCcEEEEEEEEeecCCCCCCeEEEEeccCCCCCceehHHHhhhhHHhcCC
Confidence 99999988877799999999999985 799999999999999999999999999999998864
No 5
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=100.00 E-value=2.2e-43 Score=310.08 Aligned_cols=131 Identities=21% Similarity=0.368 Sum_probs=115.6
Q ss_pred CCCCCCCCcccccCCC--ceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccC--------
Q psy14224 6 KVPGLFPPIFNVASKS--SIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQN-------- 75 (150)
Q Consensus 6 ~~~~C~P~~~NlA~gr--~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~-------- 75 (150)
..++|+|+|+|||+|| +|+|+||||++ +||+||++++... ..+|++||++++...++||++||+|..
T Consensus 14 ~~~~c~p~~~n~~~~~~~~~~~~~tCG~~-~~e~~c~~~~~~~--~~~c~~Cd~~~p~~~~~hp~~~~~~~~~~~~~~~~ 90 (525)
T 4aqs_A 14 AEGSCYPATGDLLIGRAQKLSVTSTCGLH-KPEPYCIVSHLQE--DKKCFICDSRDPYHETLNPDSHLIENVVTTFAPNR 90 (525)
T ss_dssp GGSCBCCCCEESSTTCGGGEECSCCTTSS-SCEEEEEECSSSS--CEEEEEECCSSCCBTTTBTTCCCGGGSSCC-----
T ss_pred CCCCcCCCchhhhcCCCCcEEEecCCCCC-CCcceeccCCCCC--CCcCCcCcCCCCcccccCChhhccccccccccCCC
Confidence 4689999999999998 59999999998 9999999876543 478999999943336899999999953
Q ss_pred CCceecCCcCCCCCCCcceEEEeccCceeec-------cCCCCCCeeeeEeecCCCCcccccccccccCCCCCcee
Q psy14224 76 NMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-------IDRRPSTIMCRRYALEQNNMNWWQSPTLHQGPQYEYVT 144 (150)
Q Consensus 76 ~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-------~sprP~s~~iers~d~G~tw~pwQ~~s~~~~~~y~~v~ 144 (150)
..|||||++ ++ ++|||||||+|+|+| +||||++|+||||+|+|+||+||||||.+|...|+.++
T Consensus 91 ~~~wwqs~~---~~--~~v~itl~l~~~~~~~~v~~~f~s~rP~~~~ieks~d~g~tw~p~qy~a~~C~~~f~~~~ 161 (525)
T 4aqs_A 91 LKIWWQSEN---GV--ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGIS 161 (525)
T ss_dssp CCCCEECCT---TC--CCCEEEEEEEEEEEEEEEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSTTTTSSSSC
T ss_pred CcccccCCC---CC--cCeEEEEcCCCeEEEEEEEEEEECCCCCeEEEEEecCCCCCCcceeeehhhhhhhcCCCC
Confidence 579999998 44 689999999999995 89999999999999999999999999999999996554
No 6
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=98.13 E-value=6.9e-06 Score=62.07 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=58.3
Q ss_pred CCcccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCCCCC
Q psy14224 12 PPIFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQGPQY 91 (150)
Q Consensus 12 P~~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~ 91 (150)
|...|||.|+++.|+++-+ .+++++++|++..|+|.|... .
T Consensus 24 ~~~~NLA~~k~ataSs~~~----------------------------------~~~a~~AvDGn~~T~W~s~~~---~-- 64 (161)
T 4a3z_A 24 ANYVNIAENKNVSGSNSQS----------------------------------GNPLSNITDGDLSSLWISDNG---A-- 64 (161)
T ss_dssp --CCBTTTTCCEEESCBCT----------------------------------TCCGGGGSSSCTTCCEEBGGG---C--
T ss_pred CCcccccCCCceEEeCCcC----------------------------------CCChhhcCcCCCCCeEEcCCC---C--
Confidence 3467999998888766532 145889999999999999752 1
Q ss_pred cceEEEeccCceeec--------cCCCCCCeeeeEeecCCCCcccccccc
Q psy14224 92 EYVTITLDMKQVCPH--------IDRRPSTIMCRRYALEQNNMNWWQSPT 133 (150)
Q Consensus 92 ~~VtItLdL~~~f~~--------~sprP~s~~iers~d~G~tw~pwQ~~s 133 (150)
..--|+||||+.+.| ...+.....|+-| +||.+|+..-..+
T Consensus 65 ~~~Wi~VDLg~~~~v~~v~i~~~~~~~~~~y~IevS-~Dg~~W~~v~~~t 113 (161)
T 4a3z_A 65 MPANATIDLEGNNFVDFLELHFEKEGFRFQFKVEVE-DESGNRETVLDMT 113 (161)
T ss_dssp SSEEEEEEEEEEEEEEEEEEECSSTTCCEEEEEEEE-CTTCCEEEEEECT
T ss_pred CCeEEEEECCCcEEEeEEEEEECCCCceEEEEEEEE-cCCCCEEEEEEec
Confidence 346788999999886 1224456788875 6788898764443
No 7
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=97.63 E-value=0.0001 Score=54.41 Aligned_cols=82 Identities=9% Similarity=-0.047 Sum_probs=55.6
Q ss_pred CcccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCCCCCc
Q psy14224 13 PIFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQGPQYE 92 (150)
Q Consensus 13 ~~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~ 92 (150)
.-.|||.|+++.++|+.+. +++.+++|++..|.|.+..-.......
T Consensus 8 ~~~NlA~~k~ataSS~~~~----------------------------------~~a~~AvDG~~~t~W~~~~ct~t~~~~ 53 (153)
T 3lei_A 8 ETENIARGKQASQSSTAYG----------------------------------GAATRAVDGNVDSDYGHHSVTHTNFED 53 (153)
T ss_dssp CSCCTTTTCEEEESCCCTT----------------------------------CCGGGGGSSCCCCCGGGTCSCCCCSBT
T ss_pred CCcccCCCCCeeECCCcCC----------------------------------CCccccccCCCCCccccCccccCCCCC
Confidence 3579999999988877542 347788999988999864321111113
Q ss_pred ceEEEeccCceeecc------------CCCCCCeeeeEeecCCCCccc
Q psy14224 93 YVTITLDMKQVCPHI------------DRRPSTIMCRRYALEQNNMNW 128 (150)
Q Consensus 93 ~VtItLdL~~~f~~~------------sprP~s~~iers~d~G~tw~p 128 (150)
+--|+||||+.+.|. ..|-..+.|+-+.+||.+|..
T Consensus 54 ~~W~~VDLg~~~~v~~V~i~~~~d~~~~~r~~~~~I~vs~~dg~~w~~ 101 (153)
T 3lei_A 54 NAWWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVAR 101 (153)
T ss_dssp TCEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTCCEEEE
T ss_pred CCeEEEECCCceEEeEEEEEeCCCCcccccceeEEEEEECCCCCcccc
Confidence 567889999998861 123346777666678888865
No 8
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=97.49 E-value=0.00017 Score=53.83 Aligned_cols=82 Identities=9% Similarity=-0.039 Sum_probs=54.7
Q ss_pred cccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCCCCCcc
Q psy14224 14 IFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQGPQYEY 93 (150)
Q Consensus 14 ~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~ 93 (150)
-.|||.|+++.++|+-+. +++.+++|++..|.|.+..-.......+
T Consensus 9 ~~NlA~~k~ataSS~~~~----------------------------------~~a~~AvDG~~~t~w~~~sct~t~~~~~ 54 (153)
T 4gwi_A 9 TENIARGKQASQSSTAHG----------------------------------GAATRAVDGNVDSDYGHHSVTHTNFEDN 54 (153)
T ss_dssp SCCTTTTCEEEESCCCTT----------------------------------CCGGGGGSSCCCCCGGGTCCCCCCSBTT
T ss_pred ccccCCCCceEEcCCCCC----------------------------------CCcceeEcCCCCCcccccccccCCCCCC
Confidence 479999998887776431 4578899999889998642111011135
Q ss_pred eEEEeccCceeec-----------c-CCCCCCeeeeEeecCCCCcccc
Q psy14224 94 VTITLDMKQVCPH-----------I-DRRPSTIMCRRYALEQNNMNWW 129 (150)
Q Consensus 94 VtItLdL~~~f~~-----------~-sprP~s~~iers~d~G~tw~pw 129 (150)
--|+||||+.+.| + ..|-..+-|+-++.||.+|..-
T Consensus 55 ~W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~~~~I~v~s~dg~~w~~~ 102 (153)
T 4gwi_A 55 AWWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVARQ 102 (153)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTSCEEEEE
T ss_pred CEEEEECCCCEEEEEEEEEcccCCchhhcccceEEEEECCCCCeeeee
Confidence 6788999999986 1 3444555565555678888763
No 9
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=97.33 E-value=0.00021 Score=53.17 Aligned_cols=64 Identities=9% Similarity=0.040 Sum_probs=47.0
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----C-------CCCCCeeeeEeecCCCCcccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----D-------RRPSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----s-------prP~s~~iers~d~G~tw~pwQ~ 131 (150)
.+++++++|++..|+|.|.....+ .....|+|||++...|. - .+|....|+- ++||.+|+....
T Consensus 44 ~~~~~~a~DG~~~T~W~s~~~~~~--~~p~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~-S~DG~~W~~v~~ 118 (161)
T 4a41_A 44 EGLAKFAIDGKENTIWHTKYNPVE--ELPQSITLELGGSYEINKFTYLPRSGAKNGNITKYELHV-SEDGNNFRKISE 118 (161)
T ss_dssp CCCGGGGGSSCTTCCEECCTTTTC--CSCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEE-ESSSSCEEEEEE
T ss_pred CCcHHHcCcCCCCCeEEeCCCCCC--CCCEEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEE-ECCCCceEEeee
Confidence 389999999998999999742111 13578999999998861 1 3456678887 577999987643
No 10
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=97.28 E-value=0.00041 Score=49.43 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=46.8
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec---------cCCCCCCeeeeEeecCCCCcccccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH---------IDRRPSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~---------~sprP~s~~iers~d~G~tw~pwQ~ 131 (150)
..|.+.+++|++..|+|.+.. . ..|+|||++.+.| ...+|..+.|+- ++||.+|+...-
T Consensus 22 ~~~~~~~a~Dg~~~t~W~~~~-------~-~~l~vDLg~~~~v~~v~i~~~~~~~~~~~~~i~~-S~Dg~~w~~~~~ 89 (145)
T 2jda_A 22 KGHVPANIADGDVKTRWAASG-------E-SWVQLELDKEQSIENILIVPFKPTERKLKFSIFY-SNDGKNWQPLAE 89 (145)
T ss_dssp TTBCGGGGGSSCTTCCEEEES-------S-EEEEEEEEEEEEEEEEEEEESSTTTCCEEEEEEE-ESSSSSCEEEEE
T ss_pred CCCCchhcccCCCCCeECCCC-------C-eeEEEECCCceEEEEEEEEeccCCCceEEEEEEE-eCCCCceEEeee
Confidence 358899999998889999874 2 6799999998876 124788899998 577988987654
No 11
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=97.27 E-value=0.00057 Score=64.15 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=44.8
Q ss_pred CCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc-------CCCCCCeeeeEeecCCCCcccccccc
Q psy14224 66 HSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI-------DRRPSTIMCRRYALEQNNMNWWQSPT 133 (150)
Q Consensus 66 Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~-------sprP~s~~iers~d~G~tw~pwQ~~s 133 (150)
|++++++|++..|+|.|.. ....|+||||+...|. ..+..+..|+- ++||.+|+....-+
T Consensus 42 ~~p~nAvDGn~~T~WsS~~-------~~qWLqVDLG~~~~V~~V~l~~~~~~v~~Y~Ie~-S~DG~~Wt~v~~~t 108 (914)
T 4a4a_A 42 NTADLAIDGDLSTYWESSN-------DYKWIEVDLGGIYELSKIEIFNKDEAVYKYNIYA-SEDGENFNKIAYKN 108 (914)
T ss_dssp CCGGGGSSSCTTCCEECCS-------SCCEEEEEEEEEEEEEEEEEECSSSSCEEEEEEE-ESSSSCCEEEEEEC
T ss_pred CcHHHeECCCCCCeEecCC-------CCceEEEECCCeEEEEEEEEEecCCceEEEEEEE-EcCCCCeEEEEEcc
Confidence 6788899999899999982 2357899999988861 23345667776 57899998876533
No 12
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=97.27 E-value=0.00025 Score=62.01 Aligned_cols=76 Identities=12% Similarity=0.168 Sum_probs=55.8
Q ss_pred ccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCCCCCcce
Q psy14224 15 FNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQGPQYEYV 94 (150)
Q Consensus 15 ~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~V 94 (150)
.|||.|+++.|||+.|. .+.+++++|++..|+|.+.. +. ..-
T Consensus 325 ~NLA~~~~vtASS~~~~---------------------------------~~~~~~a~Dgd~~TyW~a~~---~~--~~~ 366 (469)
T 3eyp_A 325 TNLLRGAKVKATNVRGA---------------------------------KYSPEKMLDNEKNTYFAGKD---GE--VKA 366 (469)
T ss_dssp CCTTTTCEEEESSCCCG---------------------------------GGCGGGGGSCCSSCCEECCT---TC--CCE
T ss_pred cchhcCCceEEeeccCC---------------------------------CCChhhcccCCCCceEeCCC---CC--CCc
Confidence 47888888887776552 25588999999999999986 22 346
Q ss_pred EEEeccCceeec----------cCCCCCCeeeeEeecCCCCcccc
Q psy14224 95 TITLDMKQVCPH----------IDRRPSTIMCRRYALEQNNMNWW 129 (150)
Q Consensus 95 tItLdL~~~f~~----------~sprP~s~~iers~d~G~tw~pw 129 (150)
.|+|||++.-.| ...|=.+..||- ++||++|+..
T Consensus 367 wl~vDLg~~~~vn~V~lqe~i~~gqrv~~y~Ve~-s~DG~~W~~v 410 (469)
T 3eyp_A 367 DIIFTLPKTIEFDCLMIEEVIELGHRTTKWSVEY-TVDGKNWITI 410 (469)
T ss_dssp EEEEEEEEEEEEEEEEEEECGGGCSCEEEEEEEE-ESSSSCCEEC
T ss_pred EEEEECCCCcEEeEEEEeecccCCCCeEEEEEEE-EcCCCceEEE
Confidence 889999987765 134556777876 5789888774
No 13
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=97.25 E-value=0.00047 Score=50.60 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-----------cCCCCCCeeeeEeecCCCCccccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-----------IDRRPSTIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-----------~sprP~s~~iers~d~G~tw~pwQ~~ 132 (150)
.+++++|+|++..|+|.|.... +.......|+|||++.+.| ...+|..+.|+- ++||.+|+...-.
T Consensus 27 ~g~~~~a~DG~~~T~W~s~~~~-~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~-S~Dg~~W~~v~~~ 103 (159)
T 3f2z_A 27 NGHAKHLIDGNIETFWHSRWQG-GSDPLPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEA-SEDGTNWESIGQF 103 (159)
T ss_dssp SBSGGGGSSSCTTCCEECCCTT-CCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEE-ESSSSSCEEEEEE
T ss_pred CCcHHhcCCCCCCCeEEcCCcC-CCCCCCEEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEE-EcCCCCeEEeEEe
Confidence 5789999999988999986421 1112357899999998886 134678889987 5779999876543
No 14
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=97.12 E-value=0.00036 Score=51.13 Aligned_cols=60 Identities=5% Similarity=0.125 Sum_probs=45.1
Q ss_pred CCCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-----cCCCCCCeeeeEeecCC--CCcccc
Q psy14224 63 GKKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-----IDRRPSTIMCRRYALEQ--NNMNWW 129 (150)
Q Consensus 63 ~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-----~sprP~s~~iers~d~G--~tw~pw 129 (150)
+..||+++|+|++..|||.+.. . ..-.|+|+|++...| ...++....||.| ++| .+|+.+
T Consensus 24 ~~~~~~~~~iDg~~~T~W~s~g----~--~pq~i~I~~~~~~~is~~~i~~~~~k~~~ie~s-~~~~p~~w~~i 90 (139)
T 2yc2_A 24 DERFPPENMLDGKDNTFWVTTG----M--FPQEFVLRLESCIRVSKITTLSLNVRKLAVEKC-DQDKPDQFEKV 90 (139)
T ss_dssp BTTSCGGGGGSSCTTCCEECCS----S--SCEEEEEEEEEEEEEEEEEEEEESEEEEEEEEE-CSSSCCCCEEE
T ss_pred CCCCChhheECCCCCCEEeCCC----C--CCeEEEEECCCceEEEEEEEEecCCcEEEEEEe-cCCCCCceEEE
Confidence 3579999999999999999953 3 134667788887665 3446889999985 556 578876
No 15
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.06 E-value=0.00092 Score=49.75 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-----------cCCCCCCeeeeEeecCCCCccccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-----------IDRRPSTIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-----------~sprP~s~~iers~d~G~tw~pwQ~~ 132 (150)
..++++|+|++..|+|.|.... ........|+|||++...| ...+|..+.|+- ++||.+|+.....
T Consensus 37 ~g~~~~a~DG~~~T~W~s~~~~-~~~~~p~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~-S~Dg~~W~~v~~~ 113 (169)
T 3ggl_A 37 NGLAKCLIDGDTETFWHAKWQG-GSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAA-SEDNVNWTPIGRF 113 (169)
T ss_dssp CBSGGGGGSSCSSCCEECCCSS-CCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEE-ESSSSCCEEEEEE
T ss_pred CCcHHhcCCCCCCCceEccCcC-CCCCCCEEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEE-eCCCCCcEEeEEE
Confidence 4679999999988999986421 1111357899999998886 134678888887 5779999876543
No 16
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=97.04 E-value=0.00052 Score=51.54 Aligned_cols=60 Identities=10% Similarity=0.200 Sum_probs=45.3
Q ss_pred CCCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-----cCCCCCCeeeeEeecCCC--Ccccc
Q psy14224 63 GKKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-----IDRRPSTIMCRRYALEQN--NMNWW 129 (150)
Q Consensus 63 ~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-----~sprP~s~~iers~d~G~--tw~pw 129 (150)
+..||+++|+|++..|+|.|.. . ..-.|+|+|++...| ...++....||.+ +||. +|+..
T Consensus 32 ~~~~~~~~~iDgn~~T~W~t~g----~--~Pq~i~Idf~k~~~is~~~i~~~~vk~~~ie~s-~d~~p~~w~~i 98 (153)
T 1tvg_A 32 DEKHPPENIIDGNPETFWTTTG----M--FPQEFIICFHKHVRIERLVIQSYFVQTLKIEKS-TSKEPVDFEQW 98 (153)
T ss_dssp CTTSCGGGGGSSCTTCCEECCS----C--SSEEEEEEEEEEEEEEEEEEEEESEEEEEEEEE-CSSSSCCCEEE
T ss_pred CcccCHHHcCcCCCCceEECCC----C--CCcEEEEECCCceEEEEEEEEecCCEEEEEEEE-CCCCCcceEEe
Confidence 3579999999999999999953 2 235677788977665 3446788999985 5675 68876
No 17
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=96.87 E-value=0.0008 Score=47.75 Aligned_cols=64 Identities=13% Similarity=0.166 Sum_probs=45.8
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----c-------CCCCCCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----I-------DRRPSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~-------sprP~s~~iers~d~G~tw~pwQ 130 (150)
.|++++++|++..|+|.|.-.. ........|+|||++.+.| . ..+|..+.|+- ++||.+|....
T Consensus 25 ~~~~~~~~DG~~~t~w~s~~~~-~~~~~~~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~-S~Dg~~w~~v~ 99 (150)
T 2j1a_A 25 NAPASFASDGDMNTFWHSKWSS-PAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSV-SLDGENFTEVK 99 (150)
T ss_dssp CBCGGGGSSSCTTCCEECCCSS-SCCCSCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEE-ESSSSSEEEEE
T ss_pred CCcHHhcCcCCCCCcEEccccC-CCCCCCeEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEEE-EcCCCceEEEE
Confidence 4889999999988999987422 1112357899999998886 1 23456778887 46798898643
No 18
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.0019 Score=49.20 Aligned_cols=68 Identities=9% Similarity=0.011 Sum_probs=47.3
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----cCC-----------CCCCeeeeEeecCCCCccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----IDR-----------RPSTIMCRRYALEQNNMNW 128 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~sp-----------rP~s~~iers~d~G~tw~p 128 (150)
..||+.+|+|++..|+|.+.- ..+. ...-.|+||||+...| ..| .|..+.|+-| .||.+|+.
T Consensus 37 ~G~~~~~liDgn~~T~Wht~w-~~~~-~~P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S-~Dg~~W~~ 113 (172)
T 3hnm_A 37 MGWGVESLIDNNPGTQWLCRW-DVKE-PLPYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEAS-IDNENWVK 113 (172)
T ss_dssp TSCSGGGGSSSCTTSCEECCC-SSCC-CSCEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEE-SSSSCEEE
T ss_pred cCccHHHcCCCCCCCeEEecC-CCCC-CCCEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEE-eCCCCeEE
Confidence 357999999999889999831 1121 1346789999998775 223 3555788875 55788988
Q ss_pred cccccc
Q psy14224 129 WQSPTL 134 (150)
Q Consensus 129 wQ~~s~ 134 (150)
.--+..
T Consensus 114 v~~~~~ 119 (172)
T 3hnm_A 114 LKDWTS 119 (172)
T ss_dssp EECCBC
T ss_pred eEEEEe
Confidence 766644
No 19
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=96.43 E-value=0.0049 Score=45.64 Aligned_cols=65 Identities=12% Similarity=0.017 Sum_probs=45.0
Q ss_pred CcccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCCCCCc
Q psy14224 13 PIFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQGPQYE 92 (150)
Q Consensus 13 ~~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~ 92 (150)
...|||.|+++.++|+-+.. +. ...++++++|++..|.|.|..-.......
T Consensus 7 ~~~NlA~gk~a~aSS~~~~~-~~----------------------------~~~~a~~AvDGn~~t~w~s~sc~~T~~~~ 57 (158)
T 1k12_A 7 TQENVAVRGKATQSAQLRGE-HA----------------------------ANSEASNAIDGNRDSNFYHGSCTHSSGQA 57 (158)
T ss_dssp EEEEGGGGSEEEESCBCCST-TG----------------------------GGCCGGGGGSSCCCCCGGGSCSCCBCSCS
T ss_pred CcccccCCCeeEECcccCCC-Cc----------------------------ccCCccccCcCCCCCccccccEecCCCCC
Confidence 36799999999999988641 10 00247899999988999876322100113
Q ss_pred ceEEEeccCceeec
Q psy14224 93 YVTITLDMKQVCPH 106 (150)
Q Consensus 93 ~VtItLdL~~~f~~ 106 (150)
+--+++|||+.+.|
T Consensus 58 ~~W~~VDLg~~~~V 71 (158)
T 1k12_A 58 NPWWRVDLLQVYTI 71 (158)
T ss_dssp SCEEEEEEEEEEEE
T ss_pred CCEEEEECCCceEE
Confidence 45788899999986
No 20
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=96.27 E-value=0.0012 Score=56.91 Aligned_cols=49 Identities=31% Similarity=0.567 Sum_probs=28.9
Q ss_pred CceeeccCCC-CCCeeeeEeecCCCCcccccccccccCCCCCceeEEEeCC
Q psy14224 101 KQVCPHIDRR-PSTIMCRRYALEQNNMNWWQSPTLHQGPQYEYVTITLDMK 150 (150)
Q Consensus 101 ~~~f~~~spr-P~s~~iers~d~G~tw~pwQ~~s~~~~~~y~~v~itl~~~ 150 (150)
++.+++|..+ |...+.-..+.|+. -+|||+.+...+.+|+.|||||||+
T Consensus 66 ~~~C~~Cda~~p~~~Hp~~~~~D~~-~twWQS~~~~~g~~~~~V~itLdL~ 115 (403)
T 2y38_A 66 GQYCDICTAANSNKAHPVSNAIDGT-ERWWQSPPLSRGLEYNEVNVTLDLG 115 (403)
T ss_dssp ---------------CCGGGTTSSS-SCCEECCCSTTCSSTTCCEEEEEEE
T ss_pred CCccCccCCCCccccCcHHHhccCC-ceeeccCCccCCCccccceeEEeCC
Confidence 4667776533 54444444466765 6999999999999999999999995
No 21
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.26 E-value=0.0021 Score=54.70 Aligned_cols=50 Identities=26% Similarity=0.521 Sum_probs=35.5
Q ss_pred CceeeccCCC-CCCeeeeEeecCCC---CcccccccccccCCCC-CceeEEEeCC
Q psy14224 101 KQVCPHIDRR-PSTIMCRRYALEQN---NMNWWQSPTLHQGPQY-EYVTITLDMK 150 (150)
Q Consensus 101 ~~~f~~~spr-P~s~~iers~d~G~---tw~pwQ~~s~~~~~~y-~~v~itl~~~ 150 (150)
.+.+++|+.+ |...+....+.|+. .-+|||+.+...+.+| +.|||||||+
T Consensus 55 ~~~C~~Cda~~p~~~Hp~~~~~D~~~~~~~TwWQS~~~~~~~~~~~~VtitLdL~ 109 (375)
T 4aqt_A 55 TKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLG 109 (375)
T ss_dssp CCCEEEECSSSTTTCCCGGGGSSCCCSSSCCCEECCCGGGTCSSSCCEEEEEEEE
T ss_pred CCcCCccCCCChhhhCCHhheeccCCCCCCceEECCCccccCCCCcceEEEEcCC
Confidence 4567776433 55444444455543 2479999999999999 7999999985
No 22
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=96.24 E-value=0.0069 Score=44.40 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=41.7
Q ss_pred CCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----c-CCC--CCCeeeeEeecCCCCcccc
Q psy14224 66 HSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----I-DRR--PSTIMCRRYALEQNNMNWW 129 (150)
Q Consensus 66 Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~-spr--P~s~~iers~d~G~tw~pw 129 (150)
.++++++|++..|+|.+... ..--++|||++.+.| . -+| +....|+- ++||.+|+..
T Consensus 41 g~a~~aiDGn~~T~W~s~~~------~~p~~~VDLg~~~~V~~v~i~~~r~~v~~y~I~~-S~DG~~W~~~ 104 (149)
T 4a42_A 41 SEANNLRDGNENTLWVPGQE------EEKSVTFDLSKEKDISAIDIVSKGNSPLKYSIEI-SNDGTEWTKI 104 (149)
T ss_dssp GGGGGGGSSCTTSCBCCCSC------SSEEEEEEEEEEEECCEEEEEECSSSCCCEEEEE-ESSSSSCEEE
T ss_pred CChHhcEeCCCCCEEEcCCC------CCCeEEEECCCcEEEEEEEEEcCCCCcEEEEEEE-EcCCCeEeEe
Confidence 35788999998999988752 122348999999986 1 233 66788887 5779999874
No 23
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=96.05 E-value=0.0063 Score=44.91 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=52.7
Q ss_pred CCCCCCcccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCC
Q psy14224 8 PGLFPPIFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQ 87 (150)
Q Consensus 8 ~~C~P~~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~ 87 (150)
..-.|.-.|||.|++..++|+.+. .++.+.+|++..|-|.+.+-..
T Consensus 9 ~~~~~~~~NlAlgk~at~SS~~~~----------------------------------~~a~~AvDGn~~t~w~~~sct~ 54 (151)
T 2j1v_A 9 DKFNDGNLNIAYAKPTTQSSVDYN----------------------------------GDPNRAVDGNRNGNFNSGSVTH 54 (151)
T ss_dssp -CEETTEECTTTTCCEEESCCCTT----------------------------------CCGGGGGSSCCCCCGGGTCCCC
T ss_pred CCCCCCCccccCCCCeeECCCCCC----------------------------------CCcCccEeCCCcCccccccccc
Confidence 344566789999999988877542 2367889998778888643211
Q ss_pred CCCCcceEEEeccCceeec-----------cCCCCCCeeeeEeecCCC
Q psy14224 88 GPQYEYVTITLDMKQVCPH-----------IDRRPSTIMCRRYALEQN 124 (150)
Q Consensus 88 g~~~~~VtItLdL~~~f~~-----------~sprP~s~~iers~d~G~ 124 (150)
.....+--+++|||+.+.| +..|-..+.|+=+ +++.
T Consensus 55 t~~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~~~I~v~-~~~~ 101 (151)
T 2j1v_A 55 TRADNPSWWEVDLKKMDKVGLVKIYNRTDAETQRLSNFDVILY-DNNR 101 (151)
T ss_dssp CCSCTTCEEEEEEEEEEEEEEEEEEECCSSCGGGSCSEEEEEE-CTTC
T ss_pred CCCCCCCEEEEECCCCeEcCEEEEEcCCCccccccCCEEEEEE-CCCC
Confidence 1111356788899999986 2345556666653 5554
No 24
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=95.70 E-value=0.025 Score=45.38 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=43.1
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----------CCCCCCeeeeEe-ecC---CCCccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----------DRRPSTIMCRRY-ALE---QNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----------sprP~s~~iers-~d~---G~tw~pwQ 130 (150)
.+++.+++|++..|.|.+..-........--|+||||+.+.|. ..|-....|+=+ +.+ +.+|..-.
T Consensus 168 ~~~a~~AvDG~~~t~W~~~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~~d~~~~~~~~~~i~vs~s~~~~~~~n~~~~~ 247 (293)
T 3cqo_A 168 SGIAYNAIDGNQANNWEMASCTHTKNTMDPWWRMDLSQTHRVFSVKVTNRDSFEKRINGAEIRIGDSLDNNGNHNPRCAV 247 (293)
T ss_dssp TCCGGGGGSSCCCCSGGGTCCCCCCSEESCEEEEEEEEEEEEEEEEEECCSSSGGGGTTEEEEEESCCGGGGTTSCEEEE
T ss_pred CCCccccccCCCCCccccCccccCCCCCCCEEEEECCCeEEEeEEEEEccCccccccCCeEEEEeccCccccccCceeee
Confidence 4789999999988999875211111112567899999999861 334556777764 223 55665443
Q ss_pred ccc
Q psy14224 131 SPT 133 (150)
Q Consensus 131 ~~s 133 (150)
.+.
T Consensus 248 ~~~ 250 (293)
T 3cqo_A 248 ITS 250 (293)
T ss_dssp ECC
T ss_pred ecc
Confidence 333
No 25
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=95.60 E-value=0.011 Score=47.60 Aligned_cols=60 Identities=12% Similarity=0.023 Sum_probs=43.5
Q ss_pred cccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCC-ccceeccCCCceecCCcCCCCCCCc
Q psy14224 14 IFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHS-IRYVLEQNNMNWWQSPTLHQGPQYE 92 (150)
Q Consensus 14 ~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp-~~~ltD~~~~TwWQS~~~~~g~~~~ 92 (150)
-.|||.|+++.++|+-+.. ++ +++++|++..|+|.+..-.......
T Consensus 3 ~~NlA~~k~a~aSS~~~~~---------------------------------~~~a~~AvDG~~~t~W~s~~c~~t~~~~ 49 (293)
T 3cqo_A 3 YKNVALRGKATQSARYLHT---------------------------------HGAAYNAIDGNRNSDFEAGSCTHTVEQT 49 (293)
T ss_dssp CEEGGGGSEEEESSBCSST---------------------------------TCCGGGGGSSCCCCCGGGSCSCCBCSBS
T ss_pred CcccCCCCceeECcCCCCC---------------------------------CCCcCccccCCCCCccCCCceecCCCCC
Confidence 4799999999988876531 34 7889999989999987422111113
Q ss_pred ceEEEeccCceeec
Q psy14224 93 YVTITLDMKQVCPH 106 (150)
Q Consensus 93 ~VtItLdL~~~f~~ 106 (150)
+--|+||||+.+.|
T Consensus 50 ~~W~~VDLg~~~~v 63 (293)
T 3cqo_A 50 NPWWRVDLLEPYIV 63 (293)
T ss_dssp SCEEEEEEEEEEEE
T ss_pred CCEEEEECCCceEE
Confidence 45678899999986
No 26
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=95.44 E-value=0.02 Score=49.82 Aligned_cols=65 Identities=11% Similarity=0.090 Sum_probs=47.0
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec-----------cCCCCCCeeeeEeecCCCCcc-ccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH-----------IDRRPSTIMCRRYALEQNNMN-WWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~-----------~sprP~s~~iers~d~G~tw~-pwQ 130 (150)
.+++++++|++..|+|.+.............|+|||++.+.| ...++..+.|+- ++||.+|+ +..
T Consensus 477 ~~~~~~a~DG~~~T~w~s~~~~~~~~~~~~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~-S~Dg~~w~~~v~ 553 (601)
T 1w8o_A 477 DGRASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYT-SLNGTTWDGPVA 553 (601)
T ss_dssp CCCGGGGGSSCTTCCEECCCSSTTCCCSCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEE-ESSSSSCEEEEE
T ss_pred CCccceeeCCCCCCcEecCCCCCCCCCCCeEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEE-ECCCCccceeee
Confidence 689999999998899988742111111257899999998886 123677888887 57899998 454
No 27
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=95.10 E-value=0.025 Score=41.63 Aligned_cols=63 Identities=13% Similarity=0.031 Sum_probs=40.3
Q ss_pred CCCC-cccccCCCceeeecccCCCCCCeeeeEeccCCCCCCCccccccCCCCCCCCCCCccceeccCCCceecCCcCCCC
Q psy14224 10 LFPP-IFNVASKSSIVVNATCGEVGGPEVYCKLKEHRGKADTQCSVCDASSSSPGKKHSIRYVLEQNNMNWWQSPTLHQG 88 (150)
Q Consensus 10 C~P~-~~NlA~gr~i~assTCG~~~~~e~yC~~~~~~~~~~~~C~~Cda~~~~~~~~Hp~~~ltD~~~~TwWQS~~~~~g 88 (150)
+-|. ..|||.|++..++|+-.. .++.+.+|++..|-|.|.+-...
T Consensus 7 ~~p~~~~NlAlgk~a~~SS~~~~----------------------------------~~a~~AvDG~~~t~w~~~sct~T 52 (148)
T 2j22_A 7 RTPKKLSNIALTKETRQSSTDYN----------------------------------GFSRLAVDGNKNGDYGHHSVTHT 52 (148)
T ss_dssp -----CEETTTTCEEEESCCCTT----------------------------------CCGGGGGSSCCCCCGGGTCCCCC
T ss_pred CCCCCCccccCCCceeECCCCCC----------------------------------CccCccEeCCCCCcccccceecc
Confidence 3454 679999999888777532 23678888887788877432111
Q ss_pred CCCcceEEEeccCceeec
Q psy14224 89 PQYEYVTITLDMKQVCPH 106 (150)
Q Consensus 89 ~~~~~VtItLdL~~~f~~ 106 (150)
....+--+++|||+.+.|
T Consensus 53 ~~~~~~Ww~VDLg~~~~V 70 (148)
T 2j22_A 53 KEDSPSWWEIDLAQTEEL 70 (148)
T ss_dssp CSCTTCEEEEEEEEEEEE
T ss_pred CCCCCCEEEEECCCCEEe
Confidence 111346678899999986
No 28
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.83 E-value=0.041 Score=48.31 Aligned_cols=65 Identities=14% Similarity=0.081 Sum_probs=46.4
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----c--------CCCCCCeeeeEeecCCCCc-ccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----I--------DRRPSTIMCRRYALEQNNM-NWW 129 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~--------sprP~s~~iers~d~G~tw-~pw 129 (150)
..+++++++|++..|.|.|.....+.......|+|||++...| . ..++....|+- ++||.+| +..
T Consensus 40 ~~~~~~~~~Dg~~~T~W~s~~~~~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i~~-S~Dg~~w~~~v 117 (656)
T 1k3i_A 40 SGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYL-SSDGTNWGSPV 117 (656)
T ss_dssp TTSCGGGGSSSCTTCCEECCCGGGCCCCSCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEE-ESSSSCCCSCS
T ss_pred CCCcHHhcCCCCCCCEEEeCCCCCCCCCCCceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEEEE-ECCCCCcceee
Confidence 3689999999998899988752111112357899999998885 1 22567788887 5778888 654
No 29
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=94.13 E-value=0.023 Score=49.25 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=33.1
Q ss_pred Ccee-eccCCC-CCCeeeeEeecCC---CCcccccccccccCCCCCceeEEEeCC
Q psy14224 101 KQVC-PHIDRR-PSTIMCRRYALEQ---NNMNWWQSPTLHQGPQYEYVTITLDMK 150 (150)
Q Consensus 101 ~~~f-~~~spr-P~s~~iers~d~G---~tw~pwQ~~s~~~~~~y~~v~itl~~~ 150 (150)
.+.+ .+|..+ |...+....+.|+ .+-+|||+.+...+..+..|||||||+
T Consensus 85 ~~~C~~~Cda~~p~~aHp~~~~tD~~~~~~~twWQS~~~~~~~~p~~V~itLdL~ 139 (426)
T 3zyj_B 85 PYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWS 139 (426)
T ss_dssp TTCCCCEECSSSTTTCCCGGGGGSCC----CCCEEBCCCCSCSSCCCEEEEEEEE
T ss_pred CCcccCcccCCCccccCCHHHeecCCCCCCCceecCCcccCCCCccceeEEEcCC
Confidence 3556 565433 4444444444444 357999999988777888999999985
No 30
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=93.96 E-value=0.027 Score=43.10 Aligned_cols=61 Identities=20% Similarity=0.241 Sum_probs=40.2
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec------------cCCCCCCeeeeEeecCCCCccccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH------------IDRRPSTIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~------------~sprP~s~~iers~d~G~tw~pwQ~~ 132 (150)
.+.+.+|+|++..|+|||.. .+.+.++| .+.+...| .|..|..+.|.- -++...+......
T Consensus 38 g~gv~~L~D~~~~TyWqSdg----~qpH~I~i--~f~k~v~i~~l~i~vd~~~DeSYtPs~I~v~a-G~~~~dL~ei~~v 110 (171)
T 1jhj_A 38 GFGVDQLRDDNLETYWQSDG----SQPHLVNI--QFRRKTTVKTLCIYADYKSDESYTPSKISVRV-GNNFHNLQEIRQL 110 (171)
T ss_dssp TBSTHHHHSSCTTCCEECCS----SSSEEEEE--EEEEEEEECEEEEEEEHHHHGGGSEEEEEEEE-ESSTTSCEEEEEE
T ss_pred CCChHHcCCCCCCeeEccCC----CCCeEEEE--EECCCceEEEEEEEECCCCCCCCCcEEEEEEE-eCCcccceeEEEE
Confidence 35799999999899999994 44455555 55555443 477888877654 4444455544433
No 31
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=93.86 E-value=0.06 Score=49.19 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=47.0
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----cCCCC-------CCeeeeEeecCCCCccccccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----IDRRP-------STIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~sprP-------~s~~iers~d~G~tw~pwQ~~ 132 (150)
..+|+.+++|++..|+|.|.-.. ........|+|||++.+.| ..+|. ....|+- ++||.+|+.....
T Consensus 611 ~~~~a~~aiDGn~~T~W~S~w~~-~~~~~p~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~-S~DG~~W~~v~~g 688 (737)
T 2v5d_A 611 ENAPASFASDGDMNTFWHSKWSS-PAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSV-SLDGENFTEVKTG 688 (737)
T ss_dssp SSBCGGGGGSSCSSCCEECCCSS-SCCCCCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEE-ESSSSCCCCSEEE
T ss_pred CCCCHHHccCCCCCCceeccccC-CCCCCCeEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEE-EcCCCceEEEEee
Confidence 46899999999989999986321 1111356789999998886 12443 3567776 5779999886543
No 32
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=93.22 E-value=0.073 Score=37.17 Aligned_cols=59 Identities=5% Similarity=0.003 Sum_probs=41.1
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----c-------CCCCCCeeeeEeecCCCC
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----I-------DRRPSTIMCRRYALEQNN 125 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----~-------sprP~s~~iers~d~G~t 125 (150)
..+|+..++|++..|+|.+.-.. .. ....-|+|||++...| . ..++....|+- ++||.+
T Consensus 25 ~~~~~~~~~Dg~~~t~w~~~w~~-~~-~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~-S~Dg~~ 94 (143)
T 2v72_A 25 GQDPASSAIDGNINTMWHTKWNG-SD-ALPQSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHA-INNGVE 94 (143)
T ss_dssp TTBCGGGGSSSCTTCCEECCTTS-CS-CSCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEE-EETTEE
T ss_pred CCChHHhccCCCCCCceecCCCC-CC-CCCEEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEE-EcCCCc
Confidence 35889999999878999876421 11 1467899999998886 1 23445677776 466875
No 33
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=93.12 E-value=0.06 Score=47.09 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=43.6
Q ss_pred CCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec----------cCCCCCCeeeeEeecCCCCccccc
Q psy14224 66 HSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH----------IDRRPSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 66 Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~----------~sprP~s~~iers~d~G~tw~pwQ 130 (150)
|.+.+++|++..|+|.++. +. ....|+|||++.-.| ...|=.+..||= ++||.+|+...
T Consensus 368 ~~~~~a~Dgn~~TyW~a~~---~~--~~~~l~idLg~~~~~n~v~IqE~i~~gqRV~~y~Ve~-~~dgg~W~~va 436 (478)
T 3ues_A 368 AAAAHLVDGNRDTFWRPDA---DD--AAPAITLTLPQPTTINAIVIEEAIEHGQRIEHLRVTG-ALPDGTERVLG 436 (478)
T ss_dssp GGGGGGSSSCTTCCBCCCT---TC--SSCEEEEEEEEEEEEEEEEEEECGGGCCCEEEEEEEE-ECTTSCEEEEE
T ss_pred cChhhcccCCCCceEeCCC---CC--CCeeEEEECCCCcEEEEEEEeecccCCCceEEEEEEE-EeCCCCEEEEE
Confidence 8999999999999999986 32 346788899876664 245667788886 46655677654
No 34
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=92.80 E-value=0.053 Score=45.60 Aligned_cols=26 Identities=31% Similarity=0.349 Sum_probs=23.4
Q ss_pred CcccccccccccCCCCCceeEEEeCC
Q psy14224 125 NMNWWQSPTLHQGPQYEYVTITLDMK 150 (150)
Q Consensus 125 tw~pwQ~~s~~~~~~y~~v~itl~~~ 150 (150)
+-+|||+.+...+..+..|||||||+
T Consensus 86 ~~TwWQS~~~~~~~~p~~VnlTL~L~ 111 (338)
T 3tbd_A 86 LATYWQSITWSRYPSPLEANITLSWN 111 (338)
T ss_dssp CCCCEEBCCSTTTTSCCCEEEEEEEE
T ss_pred CCceeccCcccCCCCCccceEEEcCC
Confidence 47999999988888889999999985
No 35
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=91.42 E-value=0.16 Score=40.35 Aligned_cols=48 Identities=21% Similarity=0.334 Sum_probs=34.3
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec------------cCCCCCCeeeeE
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH------------IDRRPSTIMCRR 118 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~------------~sprP~s~~ier 118 (150)
-+.+..|+|.+..|+|||. |.+.+.++|++. +.-.| .|..|..+.|.-
T Consensus 69 g~gV~~L~D~s~~TyWQSD----G~qPH~ItI~f~--k~v~I~~L~iyvD~~~DeSYtPs~I~V~a 128 (221)
T 1gqp_A 69 GNPVDFALDDNYDTFWQSD----GGQPHQLDIMFS--KRMDICVMAIFFSMIADESYAPSLVKVYA 128 (221)
T ss_dssp TCCGGGGSSSCTTCCEECC----SSSSEEEEEEEE--EEEEECEEEEEEEHHHHGGGSEEEEEEEE
T ss_pred cCCHHHhcCCCccceeccC----CCCCeEEEEEEc--CCceEEEEEEEECCCCCCCCCCEEEEEEE
Confidence 4689999999989999996 566677777654 33222 467777777653
No 36
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=88.89 E-value=0.14 Score=44.33 Aligned_cols=20 Identities=50% Similarity=0.863 Sum_probs=16.4
Q ss_pred cccccccccccCCCCCceeEEEeCC
Q psy14224 126 MNWWQSPTLHQGPQYEYVTITLDMK 150 (150)
Q Consensus 126 w~pwQ~~s~~~~~~y~~v~itl~~~ 150 (150)
-+|||+.. .+..|||||||+
T Consensus 92 ~~wwqs~~-----~~~~v~itl~l~ 111 (525)
T 4aqs_A 92 KIWWQSEN-----GVENVTIQLDLE 111 (525)
T ss_dssp CCCEECCT-----TCCCCEEEEEEE
T ss_pred cccccCCC-----CCcCeEEEEcCC
Confidence 58999975 356899999995
No 37
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=88.68 E-value=0.083 Score=51.46 Aligned_cols=66 Identities=5% Similarity=0.010 Sum_probs=0.0
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCc-ceEEEeccCceeec----cCCCCC---------CeeeeEeecCCCCcccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYE-YVTITLDMKQVCPH----IDRRPS---------TIMCRRYALEQNNMNWW 129 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~-~VtItLdL~~~f~~----~sprP~---------s~~iers~d~G~tw~pw 129 (150)
..+|+.+++|++..|+|.|.- ....... ...|+|||++...| .-||.+ ...|+=|.+||.+|++.
T Consensus 1242 geg~A~nAIDGD~~T~WHSaW-s~ss~~~PgqWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nWttV 1320 (1376)
T 2zxq_A 1242 SEGPADLAQDGNDSTHWHTSW-SENAVGNGTAWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTKDVV 1320 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHcCcCCCCCeEEecc-cccCCCCCceEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeEEEE
Confidence 358899999999999998873 2111111 26799999998886 235543 55667655489999876
Q ss_pred c
Q psy14224 130 Q 130 (150)
Q Consensus 130 Q 130 (150)
.
T Consensus 1321 a 1321 (1376)
T 2zxq_A 1321 T 1321 (1376)
T ss_dssp -
T ss_pred E
Confidence 4
No 38
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=84.03 E-value=0.26 Score=45.04 Aligned_cols=61 Identities=3% Similarity=-0.051 Sum_probs=23.5
Q ss_pred CCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC----CCeeeeEeecCCCCcccc
Q psy14224 66 HSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP----STIMCRRYALEQNNMNWW 129 (150)
Q Consensus 66 Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP----~s~~iers~d~G~tw~pw 129 (150)
.++.+++|++..|||.|.... -. ...-.|+|||++...|. .++. +.-.||= +.||++|++-
T Consensus 603 g~~~~a~Dgd~~T~w~s~~~~-~~-~~g~wi~VdL~~~~~V~~I~i~~~~~~~~~~~~ve~-S~DGk~W~~v 671 (716)
T 2cho_A 603 KNLPLQVKANRVLISPANEVV-KW-AAGNSVEIELDAIYPGENIQINFGKDAPCTWGRLEI-STDAKEWKTV 671 (716)
T ss_dssp -CCCEEEETTEEEECC--------------CEEEEEEEEEEEEEEECC------------------------
T ss_pred cCchheeCCCcceEEECCCCc-cC-CCCCEEEEEcCCcEEEEEEEEecCCCCCCceEEEEE-ECCCCCccCC
Confidence 467899999989999998621 00 12346677999888861 1221 2245665 6779999887
No 39
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=80.71 E-value=3.1 Score=33.54 Aligned_cols=65 Identities=5% Similarity=-0.070 Sum_probs=41.2
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----C--------CCCCCeeeeEeecCCCCcccccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----D--------RRPSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----s--------prP~s~~iers~d~G~tw~pwQ~ 131 (150)
..|+|.+..|.+..+.|.+.+..... ..--|++||++...|. - ....+..|+- ++||.+|..+.-
T Consensus 187 ~~~~p~~arl~~~~~~W~~~~a~~~~--~~qwLqVDLg~~~~Vt~V~tqg~~~~~~~~~v~~Y~l~~-S~dg~~W~~~~~ 263 (318)
T 2qqi_A 187 RNWMPENIRLVTSRSGWALPPAPHSY--INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGY-SNNGSDWKMIMD 263 (318)
T ss_dssp TTCCGGGGBTTCCCCSCSBCCCTTCC--SCCCEEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEEEE-ESSSSSCEECBC
T ss_pred cccCchhhhhcccCCceeCcccccCC--cCcEEEEeCCCceEEEEEEEcCccCCCCCeEEEEEEEEE-ECCCCCEEEEEc
Confidence 45778887776656788754211111 2346888999888861 1 1234566775 678999988754
No 40
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=74.99 E-value=1.5 Score=31.85 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=38.1
Q ss_pred CCCcccee-ccC-CCceecCCcCCCCCCCcceEEEeccCceeecc----CCC--------CCCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVL-EQN-NMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRR--------PSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~lt-D~~-~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----spr--------P~s~~iers~d~G~tw~pwQ 130 (150)
.|+|.+.. |.. ..+.|.+.... ..--|++||++...|. -.+ ..+..|+= ++||.+|..+.
T Consensus 32 ~~~p~~arL~~~~~~~~W~~~~~~-----~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~~-S~Dg~~W~~~~ 105 (158)
T 3bn6_A 32 SWFPYYARLDNQGKFNAWTAQTNS-----ASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYRVAY-GDDGVTWTEYK 105 (158)
T ss_dssp BCCGGGCBTTCCSSSCSEECSSCC-----TTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEE-ESSSSSCEECC
T ss_pred ccChhheEEcCCCCCCcccCCCCC-----CCCEEEEeCCCceEEEEEEeeCCCCCCCCceEEEEEEEE-ECCCCceEEEE
Confidence 46676665 322 46889887622 2345888999988861 122 22344554 68899988876
Q ss_pred cc
Q psy14224 131 SP 132 (150)
Q Consensus 131 ~~ 132 (150)
--
T Consensus 106 ~~ 107 (158)
T 3bn6_A 106 DP 107 (158)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 41
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=72.83 E-value=6.5 Score=29.66 Aligned_cols=59 Identities=12% Similarity=0.047 Sum_probs=36.1
Q ss_pred cceeccCCCc-eecCC----cCCCCCCCcceEEEeccCceeecc-----CCC--------CCCeeeeEeecCCCCccccc
Q psy14224 69 RYVLEQNNMN-WWQSP----TLHQGPQYEYVTITLDMKQVCPHI-----DRR--------PSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 69 ~~ltD~~~~T-wWQS~----~~~~g~~~~~VtItLdL~~~f~~~-----spr--------P~s~~iers~d~G~tw~pwQ 130 (150)
..|.|++..+ .|.+. ... ..--|++||++...|. -.| ..+..|+= +.||.+|..+.
T Consensus 41 arL~dg~~~t~aW~a~~~~~~~~-----~~qwLQVDLg~~~~VtgV~~tQG~~~~~~~~~vt~Y~l~y-S~DG~~W~~~~ 114 (192)
T 2w1s_A 41 ANLLDGDDNTGVWYKTLNGDTSL-----AGEFIGLDLGKEIKLDGIRFVIGKNGGGSSDKWNKFKLEY-SLDNESWTTIK 114 (192)
T ss_dssp GGGSSSCTTCCEEEECHHHHCBC-----TTCEEEEEEEEEEEEEEEEEEECCSSTTTTCCCSEEEEEE-ESSSSSCEEEE
T ss_pred HheeCCCCCcCEEeCCcccccCC-----CCceEEEECCCeEEEEEEEEEcCCCCCCCCCeEEEEEEEE-EcCCCCeEEEe
Confidence 4566665334 88762 211 2346888999887751 123 33556665 67899998887
Q ss_pred ccc
Q psy14224 131 SPT 133 (150)
Q Consensus 131 ~~s 133 (150)
-..
T Consensus 115 ~~~ 117 (192)
T 2w1s_A 115 EYD 117 (192)
T ss_dssp EEE
T ss_pred cCC
Confidence 654
No 42
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=67.48 E-value=7 Score=32.83 Aligned_cols=65 Identities=5% Similarity=-0.045 Sum_probs=39.8
Q ss_pred CCCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCCC--------CeeeeEeecCCCCcccccc
Q psy14224 64 KKHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRPS--------TIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 64 ~~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP~--------s~~iers~d~G~tw~pwQ~ 131 (150)
..|.|.+..|.+..+.|.+.+..... ..--|++||++...|. -.|+. +..|+= ++||.+|+.+.-
T Consensus 319 ~~~~p~~arl~~~~~~W~~~~~~~~~--~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~Y~i~~-S~dg~~W~~~~~ 395 (450)
T 2qqm_A 319 RNWMPENIRLVTSRSGWALPPAPHSY--INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGY-SNNGSDWKMIMD 395 (450)
T ss_dssp TTCCGGGGBTTTCSSCEEECCCSSCC--CSCCEEEEEEEEEEEEEEEEECCSCTTTCCCEEEEEEEE-ESSSSSCEECBC
T ss_pred cccCchhhhccccCCcccccccccCC--cCceEEEeCCCcEEEEEEEecCccCCCCcEEEEEEEEEE-ECCCCcEEEEEc
Confidence 35778887776656888754211111 2345888999988861 12321 334554 688999988764
No 43
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=65.67 E-value=6.6 Score=29.04 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=34.5
Q ss_pred ccceeccCCCceecCCcCCCCCCCcceEEEeccCcee--e---c-cCCC------CCCeeeeEeec-CCCCccc
Q psy14224 68 IRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVC--P---H-IDRR------PSTIMCRRYAL-EQNNMNW 128 (150)
Q Consensus 68 ~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f--~---~-~spr------P~s~~iers~d-~G~tw~p 128 (150)
+..++|++..|+|.++. + ..--|+||||+.- . | .-|| +.-..+|=|.+ |+++|.-
T Consensus 25 ~~~~~DGn~~T~f~~~~---~---~~~~i~iDLG~~~~~~l~~f~Y~Pr~~~~~~miGg~fegSnd~Df~~~~t 92 (155)
T 2yfu_A 25 IHKAFDGDLNTFFDGPT---A---NGCWLGLDFGEGVRNVITQIKFCPRSGYEQRMIGGIFQGANKEDFSDAVT 92 (155)
T ss_dssp GGGGGSSCTTCCBCCSS---S---SSCEEEEECCTTCCEEEEEEEEECCTTCGGGGTTCEEEEESSTTCTTCEE
T ss_pred hhheecCCCCcEeEcCC---C---CCceEEEECCCCcceEEeeEEEecCcccccCCcEEEEEEECCCCCCCeEE
Confidence 77899999999998753 1 1346777999754 2 3 1233 33455666432 4577764
No 44
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=60.93 E-value=7.8 Score=31.17 Aligned_cols=61 Identities=5% Similarity=0.021 Sum_probs=38.5
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCC----------CCCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRR----------PSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----spr----------P~s~~iers~d~G~tw~pwQ 130 (150)
.|+|.+..+.+..+.|.+.... ..--|++||++...|. -.+ -.+..|+= ++||.+|..+.
T Consensus 33 ~~~p~~arl~~~~~~W~~~~~~-----~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~-S~dg~~W~~~~ 106 (325)
T 2qqj_A 33 RWTPQQSRLHGDDNGWTPNLDS-----NKEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEV-STNGEDWMVYR 106 (325)
T ss_dssp SSCGGGCBTTCSSCCBCCSSCS-----TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEE-ESSSSSCEECE
T ss_pred ccCccceeecCCCCccccCcCC-----cCccEEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEEE-EcCCcEeEEee
Confidence 4778887776556789776521 1234888999888861 111 11344554 67899988875
Q ss_pred c
Q psy14224 131 S 131 (150)
Q Consensus 131 ~ 131 (150)
-
T Consensus 107 ~ 107 (325)
T 2qqj_A 107 H 107 (325)
T ss_dssp E
T ss_pred C
Confidence 3
No 45
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=60.27 E-value=13 Score=28.78 Aligned_cols=61 Identities=8% Similarity=-0.119 Sum_probs=37.5
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC------CCe----eeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP------STI----MCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP------~s~----~iers~d~G~tw~pwQ 130 (150)
.|+|.+.-+.+..+.|.+.... ..-=|++||++...|. -.+. ..+ .|+ .++||.+|..|.
T Consensus 31 ~~~P~~ARLn~~~~aW~a~~~d-----~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~-yS~DG~~W~~y~ 104 (218)
T 4deq_A 31 NWSAERSRLNYPENGWTPGEDS-----YREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKID-VSSNGEDWITIK 104 (218)
T ss_dssp GGCGGGCBTTCSSCCBCCSSCS-----TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEE-EESSSSSCEECE
T ss_pred CCChhHeEEcCCCCeECCCCCC-----CCCeEEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEE-EEeCCCceEEee
Confidence 4677777665545789877521 2345677999888761 1221 122 344 367899998876
Q ss_pred c
Q psy14224 131 S 131 (150)
Q Consensus 131 ~ 131 (150)
-
T Consensus 105 ~ 105 (218)
T 4deq_A 105 E 105 (218)
T ss_dssp E
T ss_pred c
Confidence 4
No 46
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=56.66 E-value=5.8 Score=31.91 Aligned_cols=61 Identities=10% Similarity=-0.095 Sum_probs=38.7
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCC----------CCCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRR----------PSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----spr----------P~s~~iers~d~G~tw~pwQ 130 (150)
.|+|.+..+.+..+.|.+.... ..--|++||++...|. -.+ -.+..|+= ++||.+|..+.
T Consensus 32 ~~~p~~arl~~~~~~W~~~~~~-----~~qwlqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i~~-S~Dg~~W~~~~ 105 (318)
T 2qqi_A 32 NWSAERSRLNYPENGWTPGEDS-----YREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDV-SSNGEDWITIK 105 (318)
T ss_dssp GGCGGGGBTTCSSCCBCCSSCC-----TTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEE-ESSSSSCEECE
T ss_pred cCChhhhhhcCCCCeEcCCCCC-----CCceEEEccCCcEEEEeeeeeccccCCCCccEeEEEEEEEE-ecCCCeEEEEe
Confidence 5777777776556889877521 1335888999888761 111 12344554 67899988765
Q ss_pred c
Q psy14224 131 S 131 (150)
Q Consensus 131 ~ 131 (150)
-
T Consensus 106 ~ 106 (318)
T 2qqi_A 106 E 106 (318)
T ss_dssp E
T ss_pred C
Confidence 3
No 47
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=56.02 E-value=5.9 Score=28.70 Aligned_cols=61 Identities=7% Similarity=-0.010 Sum_probs=34.9
Q ss_pred CCCccceeccC--CCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC--------CCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQN--NMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP--------STIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~--~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP--------~s~~iers~d~G~tw~pwQ 130 (150)
.|+|.+.-... ..+.|.+.... ..--|++||++...|. -.++ .+..|+= ++||.+|..+.
T Consensus 31 ~~~p~~aRL~~~~~~~~W~a~~~~-----~~qwLqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y~l~y-S~Dg~~W~~~~ 104 (160)
T 1czt_A 31 YWEPFRARLNAQGRVNAWQAKANN-----NKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHY-SEQGVEWKPYR 104 (160)
T ss_dssp BCCGGGCBTTCCSSSCSEECSSCS-----TTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEE-ESSSSSCEECC
T ss_pred ccCcccceecCCCCCCcccCCCCC-----CCcEEEEeCCCcEEEEEEEEeCcCCCCcccEEEEEEEEE-ECCCCcEEEEE
Confidence 35555543221 35678776521 1345788999888761 1221 2344554 68899988875
Q ss_pred c
Q psy14224 131 S 131 (150)
Q Consensus 131 ~ 131 (150)
-
T Consensus 105 ~ 105 (160)
T 1czt_A 105 L 105 (160)
T ss_dssp C
T ss_pred c
Confidence 4
No 48
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=51.46 E-value=19 Score=28.78 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=38.8
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC--------------CCeeeeEeecCCCCc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP--------------STIMCRRYALEQNNM 126 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP--------------~s~~iers~d~G~tw 126 (150)
.|.|.+..+.+..+.|.+....... ..--|++||++...|. -.++ .+..|+- ++||.+|
T Consensus 189 ~~~p~~arL~~~~~~W~~~~~~~~~--~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~vt~Y~l~y-S~dg~~W 265 (325)
T 2qqj_A 189 LWSPSAARLVSSRSGWFPRIPQAQP--GEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSY-SLNGKDW 265 (325)
T ss_dssp CCCGGGGBTTTCSSCBCCSSSSCCT--TTCCEEEEEEEEEEEEEEEEECBCCC----CCCCCBCEEEEEEEE-ESSSSSC
T ss_pred ccCcchhhhccCCCccccccccCCC--ccceeEeccCCceeEEEEEecCCCCCCCccccCcceeEEEEEEEE-EeCCCCe
Confidence 4666666665556889776311111 2345888999888861 1222 2344554 6789999
Q ss_pred cccccc
Q psy14224 127 NWWQSP 132 (150)
Q Consensus 127 ~pwQ~~ 132 (150)
..+...
T Consensus 266 ~~~~~~ 271 (325)
T 2qqj_A 266 EYIQDP 271 (325)
T ss_dssp EECEET
T ss_pred EEEecC
Confidence 887653
No 49
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=47.17 E-value=14 Score=27.46 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=30.9
Q ss_pred CceecCCcCCCCCCCcceEEEeccCceeecc----CCC---------CCCeeeeEeecCCCCcccccc
Q psy14224 77 MNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRR---------PSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 77 ~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----spr---------P~s~~iers~d~G~tw~pwQ~ 131 (150)
.+.|.+..... .....-=|++||++...|. -.| ..+..|+= ++||.+|..|.-
T Consensus 57 ~~aW~a~~~~~-~d~~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y~l~y-S~Dg~~W~~y~~ 122 (178)
T 2wuh_A 57 DGAWCPEIPVE-PDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINY-SRDGTRWISWRN 122 (178)
T ss_dssp TSSBCCSSCBB-TTBCCCCEEEEEEEEEEEEEEEEECCCGGGTCCCCCSEEEEEE-ESSSSSCEECCC
T ss_pred CCeecCCcCCC-CCCCCCEEEEecCCceEEeEEEEecccCCCCccceeEEEEEEE-EcCCCcEEEEec
Confidence 46787665210 0000234888999888861 122 23455664 678999988764
No 50
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=45.67 E-value=28 Score=29.16 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=38.9
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC----------C----CeeeeEeecCCCCc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP----------S----TIMCRRYALEQNNM 126 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP----------~----s~~iers~d~G~tw 126 (150)
.|.|.+..+.+..+.|.+....... ..-=|++||++...|. -.+. . +..|+= ++||.+|
T Consensus 318 ~~~p~~arl~~~~~~W~~~~~~~~~--~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~y-S~dg~~W 394 (460)
T 2qqo_A 318 LWSPSAARLVSSRSGWFPRIPQAQP--GEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSY-SLNGKDW 394 (460)
T ss_dssp SCCGGGGBTTTCSSCBCCSSSSCCT--TTCCEEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEEEEEEEE-ESSSSSC
T ss_pred ccCcchhhhccCCCCcccccccCCC--ccceEEEcCCCceEEEEEEecCCCCCCCccccccceeEEEEEEEE-EeCCCce
Confidence 4666666665456889876311111 2345888999888861 1233 1 334553 6889999
Q ss_pred cccccc
Q psy14224 127 NWWQSP 132 (150)
Q Consensus 127 ~pwQ~~ 132 (150)
+.+.-.
T Consensus 395 ~~~~~~ 400 (460)
T 2qqo_A 395 EYIQDP 400 (460)
T ss_dssp EECEET
T ss_pred EEEECC
Confidence 887653
No 51
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=45.64 E-value=24 Score=30.52 Aligned_cols=66 Identities=9% Similarity=0.004 Sum_probs=39.7
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC----------C----CeeeeEeecCCCCc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP----------S----TIMCRRYALEQNNM 126 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP----------~----s~~iers~d~G~tw 126 (150)
.|.|.+..+.+..+.|.+...... ...-=|++||++...|. -.++ . +..|+= ++||.+|
T Consensus 437 ~~~p~~arl~~~~~~W~~~~~~~~--~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~Y~l~~-S~dg~~W 513 (579)
T 2qqk_A 437 LWSPSAARLVSSRSGWFPRIPQAQ--PGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRKFKVSY-SLNGKDW 513 (579)
T ss_dssp -CCGGGGBTTTCSSCBCCSSTTCC--TTTCCEEEEEEEEEEEEEEEEECBC---------CCBCEEEEEEEE-ESSSSCC
T ss_pred ccCchhheecccCcCCcccccccC--CccceEEEecCCceEEEEEEeCCCCCCCCccccccceeeEEEEEEE-EcCCCce
Confidence 467777777655688987631111 12456788999888861 1222 1 233443 6889999
Q ss_pred ccccccc
Q psy14224 127 NWWQSPT 133 (150)
Q Consensus 127 ~pwQ~~s 133 (150)
+.+.--.
T Consensus 514 ~~~~~~~ 520 (579)
T 2qqk_A 514 EYIQDPR 520 (579)
T ss_dssp EECBCTT
T ss_pred eEEEcCC
Confidence 8876543
No 52
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=44.17 E-value=29 Score=29.46 Aligned_cols=37 Identities=3% Similarity=-0.018 Sum_probs=22.6
Q ss_pred eEEEeccCceeeccCCCCCCeeeeEeecCCCCccccc
Q psy14224 94 VTITLDMKQVCPHIDRRPSTIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 94 VtItLdL~~~f~~~sprP~s~~iers~d~G~tw~pwQ 130 (150)
-.|+++|.--++......+...||.|.|.|.+|...+
T Consensus 81 ~~lQF~l~~GC~~~~s~~~~V~LeYStd~G~sW~~v~ 117 (387)
T 2ddu_A 81 YVLQFKLNIGCTSQFSSTAPVLLQYSHDAGMSWFLVK 117 (387)
T ss_dssp CEEEEEEBSSSCSSCCSSCCEEEEEESSTTSCCEESC
T ss_pred cEEEEEEEccCCCCCCCCCcEEEEEEeCCCcceEeee
Confidence 3444444433333111225788999999999988765
No 53
>2quo_A Heat-labIle enterotoxin B chain; beta sandwich, claudin-4 binding domain, therapeutic agent; 1.75A {Clostridium perfringens}
Probab=42.98 E-value=80 Score=21.79 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=35.1
Q ss_pred CCCccceeccCCCceecCCcCCCCCCCcceEEEec-cCceeecc----------C-CCCCCeeeeEeecCCCCccccccc
Q psy14224 65 KHSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLD-MKQVCPHI----------D-RRPSTIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 65 ~Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLd-L~~~f~~~----------s-prP~s~~iers~d~G~tw~pwQ~~ 132 (150)
+.|+.++-| |.|.+...-.|.-+..||+. -||.|.|- | ---.-..+|.|.-||.
T Consensus 24 snpagnlyd------wrssnsypwtqklnlhltitatgqkyrilaskivdfniysnnfnnlvkleqslgdgv-------- 89 (126)
T 2quo_A 24 SNPAGNLYD------WRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGV-------- 89 (126)
T ss_dssp TCTTTCEEE------EECSSCBCTTCCEEEEEEECSSSEEEEEEECTTEEEEEEECTTSSCEEEEEECCCSS--------
T ss_pred CCCCcceee------ccccCCCcchheeeeEEEEEecCcEEeeeeeeeeeeEeeccchhHHHHHHHHhcccc--------
Confidence 566777766 77766443333334444443 36888751 1 1122344565555554
Q ss_pred ccccCCCCCceeEEEeC
Q psy14224 133 TLHQGPQYEYVTITLDM 149 (150)
Q Consensus 133 s~~~~~~y~~v~itl~~ 149 (150)
.=++|.|+||-
T Consensus 90 ------kdhyvdislda 100 (126)
T 2quo_A 90 ------KDHYVDISLDA 100 (126)
T ss_dssp ------SCEEEEEEECS
T ss_pred ------hhceEEEEecC
Confidence 34678888875
No 54
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=42.65 E-value=16 Score=28.74 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=30.3
Q ss_pred CceecCCcCCCCCCCcceEEEeccCceeecc----CCCC--C----CeeeeEeecCCCCcccccc
Q psy14224 77 MNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP--S----TIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 77 ~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP--~----s~~iers~d~G~tw~pwQ~ 131 (150)
.+.|.+.... ..-=|++||++...|. -.|+ . +..|+= ++||.+|..|.-
T Consensus 49 ~~~W~a~~~d-----~~qwLqVDLg~~~~Vt~V~tQG~~~~~~~vt~Y~l~y-S~Dg~~W~~y~~ 107 (257)
T 2vm9_A 49 SESWSSSVLD-----KNQFIVAGSDSVKHFVAISTQGRGDHDQWVTSYKLRY-TLDNVNWVEYNN 107 (257)
T ss_dssp CSSEECSSCS-----TTCCEEEEEEEEEEEEEEEEECCSSSSCEEEEEEEEE-ESSSSCEEEGGG
T ss_pred CCeeeCCCCC-----CCcEEeecCCCcEEEEEEEEeCCccCCceEEEEEEEE-EcCCCcEEEEcC
Confidence 4778776521 2345788999988861 1232 1 334553 678999888763
No 55
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=37.00 E-value=7.2 Score=38.39 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=0.0
Q ss_pred CCccceeccCCCceecCCcCCCCCCCcceEEEeccCceeec
Q psy14224 66 HSIRYVLEQNNMNWWQSPTLHQGPQYEYVTITLDMKQVCPH 106 (150)
Q Consensus 66 Hp~~~ltD~~~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~ 106 (150)
.++.+++|+++.|+|.|.- . +.. ..-.|+|||++...|
T Consensus 1470 e~a~nAfDGn~sT~WHT~w-s-~~~-~Ph~ItIDLge~~tV 1507 (1531)
T 3ecq_A 1470 EGLANAFDGNLSSLWHTSW-G-GGD-VGKPATMVLKEATEI 1507 (1531)
T ss_dssp -----------------------------------------
T ss_pred ccHHhccCCCCCCcEecCC-C-CCC-CCeEEEEECCCceEE
Confidence 4899999999999999863 2 211 234889999999997
No 56
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=34.86 E-value=19 Score=29.75 Aligned_cols=22 Identities=0% Similarity=-0.313 Sum_probs=17.5
Q ss_pred CCCCeeeeEeecCCCCcccccc
Q psy14224 110 RPSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 110 rP~s~~iers~d~G~tw~pwQ~ 131 (150)
....+.|+||.|.|+||+.-+.
T Consensus 53 ~~~~~~v~rS~DgG~TW~~~~~ 74 (367)
T 2ydt_A 53 PNVWFPIVKSKDGGKTWKEISK 74 (367)
T ss_dssp SCCCEEEEEESSTTSSCEEEEE
T ss_pred CCeEEEEEEECCCCcCcCcCcc
Confidence 3346789999999999998654
No 57
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=31.90 E-value=17 Score=30.09 Aligned_cols=20 Identities=5% Similarity=-0.105 Sum_probs=16.6
Q ss_pred CCeeeeEeecCCCCcccccc
Q psy14224 112 STIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 112 ~s~~iers~d~G~tw~pwQ~ 131 (150)
..+.++||.|.|+||++..-
T Consensus 119 ~~i~v~~S~D~G~TW~~~~~ 138 (367)
T 2ydt_A 119 TLIEVYASRDKGYTWEFVSH 138 (367)
T ss_dssp EEEEEEEESSSSSCCEEEEE
T ss_pred CeEEEEEECCCCCCCcCCee
Confidence 46788999999999987653
No 58
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=31.88 E-value=18 Score=29.65 Aligned_cols=20 Identities=5% Similarity=-0.009 Sum_probs=16.7
Q ss_pred CCeeeeEeecCCCCcccccc
Q psy14224 112 STIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 112 ~s~~iers~d~G~tw~pwQ~ 131 (150)
..+.++||.|.|+||++..-
T Consensus 114 ~~~~v~~S~D~G~TW~~~~~ 133 (355)
T 3a72_A 114 TDIVLYASQDDGMTWDFVSH 133 (355)
T ss_dssp EEEEEEEESSTTSCCEEEEE
T ss_pred ceEEEEEECCCCccCccCcc
Confidence 35778999999999988765
No 59
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=28.68 E-value=72 Score=27.97 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=39.7
Q ss_pred CCCCccceeccC--CCceecCCcCCCCCCCcceEEEeccCceeecc----CCC--------CCCeeeeEeecCCCCcccc
Q psy14224 64 KKHSIRYVLEQN--NMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRR--------PSTIMCRRYALEQNNMNWW 129 (150)
Q Consensus 64 ~~Hp~~~ltD~~--~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----spr--------P~s~~iers~d~G~tw~pw 129 (150)
..|.+.++.+.+ ..+.|.+....... ...--|++||++...|. -.+ -.+..|+- +.||.+|..+
T Consensus 353 ~~~~p~~arl~~~~~~~~W~~~~~~~~~-~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i~y-S~Dg~~W~~~ 430 (647)
T 1sdd_B 353 GYWEPKLARLNNGGSYNAWIAEKLSTEF-NPEPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAY-SLDRKNWRIF 430 (647)
T ss_dssp TTCCGGGCBTTCCSSSCSEECSCCCCSS-CCCSCEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEEEE-ESSSSSCEEC
T ss_pred cccccceeeecCCCCcccccCCCCcccc-cccceEEeccCCeEEEEEEEEcCCCCCCCccEEEEEEEEE-EcCCCceEEe
Confidence 357888887765 24689887632110 01346888999888761 111 12345565 5779888776
Q ss_pred cc
Q psy14224 130 QS 131 (150)
Q Consensus 130 Q~ 131 (150)
.-
T Consensus 431 ~~ 432 (647)
T 1sdd_B 431 KG 432 (647)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 60
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=27.86 E-value=30 Score=28.39 Aligned_cols=21 Identities=10% Similarity=-0.173 Sum_probs=16.9
Q ss_pred CCCeeeeEeecCCCCcccccc
Q psy14224 111 PSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 111 P~s~~iers~d~G~tw~pwQ~ 131 (150)
...+.|+||.|.|+||..-+.
T Consensus 49 ~~~~~v~rS~DgG~TW~~~~~ 69 (355)
T 3a72_A 49 AVYFPIYRSKDHGKTWNEISR 69 (355)
T ss_dssp CCCEEEEEESSTTSCCEEEEE
T ss_pred CceEEEEEEcCCCcCcCCCcc
Confidence 345678999999999998654
No 61
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=26.01 E-value=18 Score=26.11 Aligned_cols=48 Identities=8% Similarity=0.136 Sum_probs=28.6
Q ss_pred CceecCCcCCCCCCCcceEEEeccCceeecc----CCCC----C----CeeeeEeecCCCCccccc
Q psy14224 77 MNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP----S----TIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 77 ~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP----~----s~~iers~d~G~tw~pwQ 130 (150)
...|.+.... ..-=|++||++...|. -.|. . +..|+= ++||.+|..+.
T Consensus 47 ~~aW~a~~~d-----~~qwLqVDLg~~~~VtgV~tqG~~~~~~~~~v~~y~l~y-S~Dg~~W~~~~ 106 (159)
T 3hny_M 47 SNAWRPQVNN-----PKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISS-SQDGHQWTLFF 106 (159)
T ss_dssp SCSBCCSSCS-----TTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEE-ESSSSSCEECE
T ss_pred CCccCCCCCC-----CCCeEEcccCCcEEEEEEEeecCCCCCccceEEEEEEEE-EECCCcEEEEe
Confidence 4678766421 2345777999888761 1221 1 233443 67899998875
No 62
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=25.12 E-value=71 Score=29.12 Aligned_cols=58 Identities=10% Similarity=0.156 Sum_probs=35.4
Q ss_pred CCCccceeccC--CCceecCCcCCCCCCCcceEEEeccCceeecc----CCCC--------CCeeeeEeecCCCCccccc
Q psy14224 65 KHSIRYVLEQN--NMNWWQSPTLHQGPQYEYVTITLDMKQVCPHI----DRRP--------STIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 65 ~Hp~~~ltD~~--~~TwWQS~~~~~g~~~~~VtItLdL~~~f~~~----sprP--------~s~~iers~d~G~tw~pwQ 130 (150)
.|+|.+..+.+ ..+.|.+.. ..--|++||++...|. -.|+ .+..|+= ++||.+|..+.
T Consensus 483 ~~~p~~arL~~~~~~~aW~~~~-------~~qwLQVDLg~~~~Vt~V~tQG~~~~~~~~~v~sY~I~y-S~DG~~W~~y~ 554 (770)
T 2r7e_B 483 QWAPKLARLHYSGSINAWSTKE-------PFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMY-SLDGKKWQTYR 554 (770)
T ss_dssp SCCTTCCSSCCSTTCSSEECCS-------SCCCEEEEEEEEEEECBCCCCCEECSSSEECCSEEEEEE-ESSSSSCBCCC
T ss_pred ccchheEEECCCCCccccccCC-------CCceEEecCCceEEEEEEEEcccCcCCcccceEEEEEEE-ecCCCccEEee
Confidence 46666665543 257887632 2345788999888862 1222 2344554 67899988765
No 63
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=23.27 E-value=59 Score=29.83 Aligned_cols=18 Identities=6% Similarity=-0.348 Sum_probs=15.2
Q ss_pred CeeeeEeecCCCCccccc
Q psy14224 113 TIMCRRYALEQNNMNWWQ 130 (150)
Q Consensus 113 s~~iers~d~G~tw~pwQ 130 (150)
..+||-|.|.|.+|++.+
T Consensus 450 ~V~leYS~d~G~sW~~l~ 467 (725)
T 2e26_A 450 AIELEYSVDLGLSWHPLV 467 (725)
T ss_dssp EEEEEEESSTTSSCEESS
T ss_pred eEEEEEecCCCcceeecc
Confidence 678899999999998754
No 64
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=21.22 E-value=37 Score=30.49 Aligned_cols=23 Identities=4% Similarity=-0.288 Sum_probs=19.3
Q ss_pred CCCCeeeeEeecCCCCccccccc
Q psy14224 110 RPSTIMCRRYALEQNNMNWWQSP 132 (150)
Q Consensus 110 rP~s~~iers~d~G~tw~pwQ~~ 132 (150)
-+..+++.||.|.|+||.+-|.-
T Consensus 262 ~~i~iv~rRS~DgG~TWs~~~~i 284 (686)
T 2jkb_A 262 SKINIATSYSDDNGKTWSEPIFA 284 (686)
T ss_dssp SCEEEEEEEESSTTSSCCCCEEE
T ss_pred CCeEEEEEEcCCCCCcCCCCEEc
Confidence 45578899999999999998854
No 65
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=20.34 E-value=40 Score=30.26 Aligned_cols=21 Identities=10% Similarity=-0.181 Sum_probs=17.0
Q ss_pred CCCeeeeEeecCCCCcccccc
Q psy14224 111 PSTIMCRRYALEQNNMNWWQS 131 (150)
Q Consensus 111 P~s~~iers~d~G~tw~pwQ~ 131 (150)
+..+++.||.|.|+||.+-+-
T Consensus 242 ~~~i~~~rS~D~G~TW~~~~~ 262 (679)
T 2sli_A 242 KINIAFAKSTDGGNTWSEPTL 262 (679)
T ss_dssp CEEEEEEEESSTTSSCCCCEE
T ss_pred CeEEEEEEECCCCcCCCCCEE
Confidence 335789999999999998654
Done!