BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14226
(532 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains
From Rat
Length = 343
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/390 (52%), Positives = 261/390 (66%), Gaps = 56/390 (14%)
Query: 135 KGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPH 193
K PWFP S+LD C+HL+TK++PDLD++HPGF+DQVYRQRRK IAEIAF+Y +G+PIPH
Sbjct: 8 KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPH 67
Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
++YT E ATWK V+ T+ L H C+E+ + F + L++
Sbjct: 68 VEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQL---------------------LER 106
Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFT 313
+ G+ L FL + TGF
Sbjct: 107 YCGYREDSIPQLEDVSRFLKER----------------------------------TGFQ 132
Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
LRP AGLL+ARDFLASLAFRVFQ TQY+RH +P H+ EPDC HELLGH+P+LAD +FAQ
Sbjct: 133 LRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ 192
Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
FSQ+IGLASLGASDEEIEKLSTVYWFTVEFGLCK+NGE+KAYGAGLLSSYGELLH++S++
Sbjct: 193 FSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEE 252
Query: 434 PEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRV 493
PE R FDP + AVQPYQDQ YQP+YFV+ESF DAK+K R + S + RP+ V+F+PYT +
Sbjct: 253 PEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAI 312
Query: 494 EVLDCVDKLENLMSQLNLEMLHLNTAVNKL 523
+VLD ++ + + E+ L A++ +
Sbjct: 313 DVLDSPHTIQRSLEGVQDELHTLAHALSAI 342
>pdb|2TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains
From Rat
Length = 343
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/390 (52%), Positives = 260/390 (66%), Gaps = 56/390 (14%)
Query: 135 KGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPH 193
K PWFP S+LD C+HL+TK++PDLD++HPGF+DQVYRQRRK IAEIAF+Y +G+PIPH
Sbjct: 8 KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPH 67
Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
++YT E ATWK V+ T+ L H C+E+ + F + L++
Sbjct: 68 VEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQL---------------------LER 106
Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFT 313
+ G+ L FL + TGF
Sbjct: 107 YCGYREDSIPQLEDVSRFLKER----------------------------------TGFQ 132
Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
LRP AGLL+ARD LASLAFRVFQ TQY+RH +P H+ EPDC HELLGH+P+LAD +FAQ
Sbjct: 133 LRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ 192
Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
FSQ+IGLASLGASDEEIEKLSTVYWFTVEFGLCK+NGE+KAYGAGLLSSYGELLH++S++
Sbjct: 193 FSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGELLHSLSEE 252
Query: 434 PEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRV 493
PE R FDP + AVQPYQDQ YQP+YFV+ESF DAK+K R + S + RP+ V+F+PYT +
Sbjct: 253 PEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTLAI 312
Query: 494 EVLDCVDKLENLMSQLNLEMLHLNTAVNKL 523
+VLD ++ + + E+ L A++ +
Sbjct: 313 DVLDSPHTIQRSLEGVQDELHTLAHALSAI 342
>pdb|2XSN|A Chain A, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|B Chain B, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|C Chain C, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|D Chain D, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
Length = 343
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/388 (51%), Positives = 253/388 (65%), Gaps = 56/388 (14%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP S+LD C+HL+TK++PDLD++HPGF+DQVYRQRRK IAEIAF+Y +GDPIP ++
Sbjct: 3 PWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRVE 62
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
YT E ATWK +V+ L+ G++ + E L++ +
Sbjct: 63 YTAEEIATWK-------------------EVYTTLK--GLYATHACGEHLEAFALLERFS 101
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
G+ L FL + TGF LR
Sbjct: 102 GYREDNIPQLEDVSRFLKER----------------------------------TGFQLR 127
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL+ARDFLASLAFRVFQ TQY+RH +P H+ EPDC HELLGH+P+LAD +FAQFS
Sbjct: 128 PVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFS 187
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
Q+IGLASLGASDEEIEKLST+YWFTVEFGLCK+NGEVKAYGAGLLSSYGELLH +S++PE
Sbjct: 188 QDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLLSSYGELLHCLSEEPE 247
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
R FDP + AVQPYQDQ YQ +YFV+ESF DAK+K R + S + RP+ V+F+PYT ++V
Sbjct: 248 IRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQRPFSVKFDPYTLAIDV 307
Query: 496 LDCVDKLENLMSQLNLEMLHLNTAVNKL 523
LD + + + E+ L A++ +
Sbjct: 308 LDSPQAVRRSLEGVQDELDTLAHALSAI 335
>pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase
pdb|2PHM|A Chain A, Structure Of Phenylalanine Hydroxylase Dephosphorylated
Length = 429
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/447 (43%), Positives = 267/447 (59%), Gaps = 60/447 (13%)
Query: 54 ALVLRMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLL-NLI 112
+L+ ++E + +LA++L+ E + H+E+R S++ +++ +D + +L ++I
Sbjct: 36 SLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSII 95
Query: 113 RSLRQSSSLGG-INLLTENNISVKGPWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQV 171
+SLR + +G ++ L+ + PWFP +LD + + Y +LD +HPGF D V
Sbjct: 96 KSLR--NDIGATVHELSRDKEKNTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPV 153
Query: 172 YRQRRKDIAEIAFKY-NGDPIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAML 230
YR RRK A+IA+ Y +G PIP ++YT+ E TW VF T+ L H C E+ +F +L
Sbjct: 154 YRARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLL 213
Query: 231 QAEGIFTPERIPQLEEMSNFLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXX 290
+ F + IPQLE++S F
Sbjct: 214 EKYCGFREDNIPQLEDVSQF---------------------------------------- 233
Query: 291 XXXXXXXIQTAALVLRMQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHT 350
+QT TGF LRP AGLL++RDFL LAFRVF TQY+RH P +T
Sbjct: 234 -------LQTC--------TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYT 278
Query: 351 VEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENG 410
EPD HELLGH+PL +D SFAQFSQEIGLASLGA DE IEKL+T+YWFTVEFGLCKE
Sbjct: 279 PEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEGD 338
Query: 411 EVKAYGAGLLSSYGELLHAISDKPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEK 470
+KAYGAGLLSS+GEL + +SDKP+ + TA Q Y E+QP+Y+VAESF DAKEK
Sbjct: 339 SIKAYGAGLLSSFGELQYCLSDKPKLLPLELEKTACQEYSVTEFQPLYYVAESFSDAKEK 398
Query: 471 FRRWVSTMSRPYEVRFNPYTQRVEVLD 497
R + +T+ RP+ VR++PYTQRVEVLD
Sbjct: 399 VRTFAATIPRPFSVRYDPYTQRVEVLD 425
>pdb|2PAH|A Chain A, Tetrameric Human Phenylalanine Hydroxylase
pdb|2PAH|B Chain B, Tetrameric Human Phenylalanine Hydroxylase
Length = 335
Score = 351 bits (900), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 181/389 (46%), Positives = 235/389 (60%), Gaps = 56/389 (14%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 2 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 61
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 62 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 116
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 117 ------------------------------------------LQTC--------TGFRLR 126
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 127 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 186
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGA DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 187 QEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 246
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 247 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 306
Query: 496 LDCVDKLENLMSQLNLEMLHLNTAVNKLR 524
LD +L+ L +N E+ L +A+ K++
Sbjct: 307 LDNTQQLKILADSINSEIGILCSALQKIK 335
>pdb|4ANP|A Chain A, Crystal Structure Of Human Phenylalanine Hydroxylase In
Complex With A Pharmacological Chaperone
Length = 324
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 220/362 (60%), Gaps = 56/362 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 16 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 75
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 76 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 130
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 131 ------------------------------------------LQTC--------TGFRLR 140
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 141 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 200
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGA DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 201 QEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 260
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 261 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 320
Query: 496 LD 497
LD
Sbjct: 321 LD 322
>pdb|1J8T|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(Ii)
pdb|1J8U|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(ii)
In Complex With Tetrahydrobiopterin
pdb|1LRM|A Chain A, Crystal Structure Of Binary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase With
Dihydrobiopterin (Bh2)
pdb|1KW0|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase
(Fe(Ii) ) In Complex With Tetrahydrobiopterin And
Thienylalanine
pdb|1MMK|A Chain A, Crystal Structure Of Ternary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase ((Feii))
Complexed With Tetrahydrobiopterin And Thienylalanine
pdb|1MMT|A Chain A, Crystal Structure Of Ternary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase (Fe(Ii))
Complexed With Tetrahydrobiopterin And Norleucine
Length = 325
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 220/362 (60%), Gaps = 56/362 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 17 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 76
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 77 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 131
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 132 ------------------------------------------LQTC--------TGFRLR 141
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 142 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 201
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGA DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 202 QEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 261
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 262 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 321
Query: 496 LD 497
LD
Sbjct: 322 LD 323
>pdb|1DMW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine
Hydroxylase With Bound 7,8-Dihydro-L-Biopterin
Length = 307
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 219/361 (60%), Gaps = 56/361 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 2 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 61
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 62 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 116
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 117 ------------------------------------------LQTC--------TGFRLR 126
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 127 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 186
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGA DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 187 QEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 246
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 247 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 306
Query: 496 L 496
L
Sbjct: 307 L 307
>pdb|1PAH|A Chain A, Human Phenylalanine Hydroxylase Dimer, Residues 117-424
pdb|3PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Adrenaline Inhibitor
pdb|4PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Nor- Adrenaline Inhibitor
pdb|5PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Dopamine Inhibitor
pdb|6PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound L- Dopa (3,4-Dihydroxyphenylalanine)
Inhibitor
Length = 308
Score = 337 bits (863), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 219/361 (60%), Gaps = 56/361 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 3 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 62
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 63 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 117
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 118 ------------------------------------------LQTC--------TGFRLR 127
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 128 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 187
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGA DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 188 QEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 247
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 248 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 307
Query: 496 L 496
L
Sbjct: 308 L 308
>pdb|1TDW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine
Hydroxylase Bh4-Responsive Pku Mutant A313t.
pdb|1TG2|A Chain A, Crystal Structure Of Phenylalanine Hydroxylase A313t
Mutant With 7,8-Dihydrobiopterin Bound
Length = 308
Score = 335 bits (859), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 218/361 (60%), Gaps = 56/361 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP +LD + + Y +LD +HPGF D VYR RRK A+IA+ Y +G PIP ++
Sbjct: 3 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE 62
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
Y + E TW VF T+ L H C EY +F +L+ F + IPQLE++S F
Sbjct: 63 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQF----- 117
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
+QT TGF LR
Sbjct: 118 ------------------------------------------LQTC--------TGFRLR 127
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AGLL++RDFL LAFRVF TQY+RH P +T EPD HELLGH+PL +D SFAQFS
Sbjct: 128 PVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFS 187
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLG DE IEKL+T+YWFTVEFGLCK+ +KAYGAGLLSS+GEL + +S+KP+
Sbjct: 188 QEIGLASLGTPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPK 247
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ TA+Q Y E+QP+Y+VAESF DAKEK R + +T+ RP+ VR++PYTQR+EV
Sbjct: 248 LLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYTQRIEV 307
Query: 496 L 496
L
Sbjct: 308 L 308
>pdb|3E2T|A Chain A, The Catalytic Domain Of Chicken Tryptophan Hydroxylase 1
With Bound Tryptophan
Length = 314
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/361 (46%), Positives = 216/361 (59%), Gaps = 56/361 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PW+P SDLD C + + Y DLD +HPGF D VYR+RRK A++A Y +GDPIP I+
Sbjct: 7 PWYPKKISDLDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPEIE 66
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
+T+ E TW V+ + L P H C+EY +L + + IPQLE++S FLK+ T
Sbjct: 67 FTEEEIKTWGTVYRELNKLYPTHACREYLKNLPLLTKYCGYREDNIPQLEDVSRFLKERT 126
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
GFT+RP AG L+ RDFLA G R
Sbjct: 127 GFTIRPVAGYLSPRDFLA-------------------------------------GLAFR 149
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
VF TQYVRH+ P +T EPD HELLGH+PLLA+PSFAQFS
Sbjct: 150 ------------------VFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFS 191
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGASDE ++KL+T Y+FTVEFGLCK+ G+++ YGAGLLSS EL H++S +
Sbjct: 192 QEIGLASLGASDEAVQKLATCYFFTVEFGLCKQEGQLRVYGAGLLSSISELKHSLSGSAK 251
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQRVEV 495
+ FDP T Q +Q +YFV+ESFE+AKEK R + T+ RP+ V++NPYTQ V++
Sbjct: 252 VKPFDPKVTCKQECLITTFQEVYFVSESFEEAKEKMREFAKTIKRPFGVKYNPYTQSVQI 311
Query: 496 L 496
L
Sbjct: 312 L 312
>pdb|1MLW|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase With
Bound 7,8-Dihydro-L-Biopterin Cofactor And Fe(Iii)
Length = 301
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 208/352 (59%), Gaps = 56/352 (15%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP SDLD+C + + Y +LD +HPGF D VYR+RRK A++A Y +GDPIP ++
Sbjct: 5 PWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVE 64
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
+T+ E TW VF + L P H C+EY +L K+
Sbjct: 65 FTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLS---------------------KYC 103
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
G+ L +FL + TGF++R
Sbjct: 104 GYREDNIPQLEDVSNFLK----------------------------------ERTGFSIR 129
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AG L+ RDFL+ LAFRVF TQYVRH+ PF+T EPD HELLGH+PLLA+PSFAQFS
Sbjct: 130 PVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFS 189
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGAS+E ++KL+T Y+FTVEFGLCK++G+++ +GAGLLSS EL HA+S +
Sbjct: 190 QEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAK 249
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFN 487
+ FDP T Q +Q +YFV+ESFEDAKEK R + T+ RP+ V++N
Sbjct: 250 VKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTIKRPFGVKYN 301
>pdb|3HF6|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase Type 1
With Bound Lp-521834 And Fe
pdb|3HF8|A Chain A, Crystal Structure Of Human Tryoptophan Hydroxylase Type 1
With Bound Lp-533401 And Fe
pdb|3HFB|A Chain A, Crystal Structure Of Human Tryoptophan Hydroxylase Type 1
With Lp- 534193
Length = 290
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 201/343 (58%), Gaps = 56/343 (16%)
Query: 137 PWFPTHASDLDNCNHLMTKYEPDLDMNHPGFADQVYRQRRKDIAEIAFKY-NGDPIPHID 195
PWFP SDLD+C + + Y +LD +HPGF D VYR+RRK A++A Y +GDPIP ++
Sbjct: 3 PWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVE 62
Query: 196 YTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKKHT 255
+T+ E TW VF + L P H C+EY +L K+
Sbjct: 63 FTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLS---------------------KYC 101
Query: 256 GFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFTLR 315
G+ L +FL + TGF++R
Sbjct: 102 GYREDNIPQLEDVSNFLK----------------------------------ERTGFSIR 127
Query: 316 PAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQFS 375
P AG L+ RDFL+ LAFRVF TQYVRH+ PF+T EPD HELLGH+PLLA+PSFAQFS
Sbjct: 128 PVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFS 187
Query: 376 QEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDKPE 435
QEIGLASLGAS+E ++KL+T Y+FTVEFGLCK++G+++ +GAGLLSS EL HA+S +
Sbjct: 188 QEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAK 247
Query: 436 HRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTM 478
+ FDP T Q +Q +YFV+ESFEDAKEK R + T+
Sbjct: 248 VKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTI 290
>pdb|2V28|A Chain A, Apo Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
pdb|2V28|B Chain B, Apo Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
Length = 267
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 116/277 (41%), Gaps = 60/277 (21%)
Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
I+++ E W+ +F + + C EY + A L +RIPQL+E+S LK
Sbjct: 18 IEWSTEENLIWQELFTRQIACIKDKACDEYHEGLAKLN----LPTDRIPQLDEVSKVLKV 73
Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFT 313
TG+ P L+ +F
Sbjct: 74 STGWECYPVPALIGFGEFFR---------------------------------------- 93
Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
LL+ + F + R + Y++ EPD HE+ GH PLL + SFA
Sbjct: 94 ------LLSEKKFPVATFIRSREEMDYLQ---------EPDIFHEIFGHCPLLTNSSFAN 138
Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
+++ G L A+ E+ L+ +YWFT+EFGL ++ YG G+LSS GE +A+++
Sbjct: 139 YTEAYGKMGLNATKEQRVFLARLYWFTIEFGLLDTPKGLRIYGGGVLSSPGETDYAMNNT 198
Query: 434 P-EHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKE 469
+ + FD + PY+ QPIY++ D E
Sbjct: 199 DVDRKPFDILDVLRTPYRIDIMQPIYYMLTKVSDLDE 235
>pdb|2V27|A Chain A, Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
pdb|2V27|B Chain B, Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
Length = 275
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 116/277 (41%), Gaps = 60/277 (21%)
Query: 194 IDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSNFLKK 253
I+++ E W+ +F + + C EY + A L +RIPQL+E+S LK
Sbjct: 18 IEWSTEENLIWQELFTRQIACIKDKACDEYHEGLAKLN----LPTDRIPQLDEVSKVLKV 73
Query: 254 HTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQHTGFT 313
TG+ P L+ +F
Sbjct: 74 STGWECYPVPALIGFGEFFR---------------------------------------- 93
Query: 314 LRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADPSFAQ 373
LL+ + F + R + Y++ EPD HE+ GH PLL + SFA
Sbjct: 94 ------LLSEKKFPVATFIRSREEMDYLQ---------EPDIFHEIFGHCPLLTNSSFAN 138
Query: 374 FSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLHAISDK 433
+++ G L A+ E+ L+ +YWFT+EFGL ++ YG G+LSS GE +A+++
Sbjct: 139 YTEAYGKMGLNATKEQRVFLARLYWFTIEFGLLDTPKGLRIYGGGVLSSPGETDYAMNNT 198
Query: 434 P-EHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKE 469
+ + FD + PY+ QPIY++ D E
Sbjct: 199 DVDRKPFDILDVLRTPYRIDIMQPIYYMLTKVSDLDE 235
>pdb|3TK2|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase
From Chromobacterium Violaceum Cocrystallized With
Phenylalanine In A Site Distal To The Active Site
pdb|3TK4|A Chain A, Crystal Structure Of Phenylalanine Hydroxylase From
Chromobacterium Violaceum Bound To Cobalt
Length = 302
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 61/278 (21%)
Query: 190 PIPHIDYTDSEYATWKAVFNTVLDLMPKHFCQEYKDVFAMLQAEGIFTPERIPQLEEMSN 249
P P Y+ ++ATW ++ L+P C E+ + L+ + +R+P ++
Sbjct: 35 PQPLDRYSAEDHATWATLYQRQCKLLPGRACDEFMEGLERLEVDA----DRVPDFNKL-- 88
Query: 250 FLKKHTGFTLRPAAGLLTARDFLANQGLTEEEVILXXXXXXXXXXXXXIQTAALVLRMQH 309
NQ L M
Sbjct: 89 ------------------------NQKL-----------------------------MAA 95
Query: 310 TGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLLADP 369
TG+ + GL+ F LA R F T ++R + EPD H+L GH+PLL +P
Sbjct: 96 TGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINP 155
Query: 370 SFAQFSQEIGLASLGASD-EEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGELLH 428
FA + + G + A + L+ +YW+TVEFGL ++ YGAG+LSS E ++
Sbjct: 156 VFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGMRIYGAGILSSKSESIY 215
Query: 429 AISDKPEHRV-FDPISTAVQPYQDQEYQPIYFVAESFE 465
+ +RV FD + Y+ +Q YFV +SF+
Sbjct: 216 CLDSASPNRVGFDLMRIMNTRYRIDTFQKTYFVIDSFK 253
>pdb|1LTU|A Chain A, Crystal Structure Of Chromobacterium Violaceum, Apo (No
Iron Bound) Structure
pdb|1LTV|A Chain A, Crystal Structure Of Chromobacterium Violaceum
Phenylalanine Hydroxylase, Structure With Bound Oxidized
Fe(Iii)
pdb|1LTZ|A Chain A, Crystal Structure Of Chromobacterium Violaceum
Phenylalanine Hydroxylase, Structure Has Bound Iron
(iii) And Oxidized Cofactor 7,8-dihydrobiopterin
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 307 MQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLL 366
M TG+ + GL+ F LA R F T ++R + EPD H+L GH+PLL
Sbjct: 88 MAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLL 147
Query: 367 ADPSFAQFSQEIGLASLGASD-EEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGE 425
+P FA + + G + A + L+ +YW+TVEFGL ++ YGAG+LSS E
Sbjct: 148 INPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGMRIYGAGILSSKSE 207
Query: 426 LLHAISDKPEHRV-FDPISTAVQPYQDQEYQPIYFVAESFE 465
++ + +RV FD + Y+ +Q YFV +SF+
Sbjct: 208 SIYCLDSASPNRVGFDLMRIMNTRYRIDTFQKTYFVIDSFK 248
>pdb|3TCY|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase
From Chromobacterium Violaceum (Cpah) Bound To
Phenylalanine In A Site Distal To The Active Site
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 307 MQHTGFTLRPAAGLLTARDFLASLAFRVFQSTQYVRHTKTPFHTVEPDCIHELLGHMPLL 366
M TG+ + GL+ F LA R F T ++R + EPD H+L GH+PLL
Sbjct: 93 MAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLL 152
Query: 367 ADPSFAQFSQEIGLASLGASD-EEIEKLSTVYWFTVEFGLCKENGEVKAYGAGLLSSYGE 425
+P FA + + G + A + L+ +YW+TVEFGL ++ YGAG+LSS E
Sbjct: 153 INPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGMRIYGAGILSSKSE 212
Query: 426 LLHAISDKPEHRV-FDPISTAVQPYQDQEYQPIYFVAESFE 465
++ + +RV FD + Y+ +Q YFV +SF+
Sbjct: 213 SIYCLDSASPNRVGFDLMRIMNTRYRIDTFQKTYFVIDSFK 253
>pdb|3VDI|A Chain A, Structure Of The Fmo Protein From Pelodictyon Phaeum
Length = 367
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 90 MAGIQF-DVLVKVDMTRRDLLNLIRSLRQSSSLGGINL 126
M G QF D+++KV + +DL+ +QS S GG+N
Sbjct: 140 MQGRQFHDIMMKVPLDNKDLIETWEGFQQSISGGGVNF 177
>pdb|1FT9|A Chain A, Structure Of The Reduced (Feii) Co-Sensing Protein From R.
Rubrum
pdb|1FT9|B Chain B, Structure Of The Reduced (Feii) Co-Sensing Protein From R.
Rubrum
Length = 222
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 94 QFDVLVKVDMTRRDLLNLIRSLRQSSSLGGINLLTENNISVKG 136
Q V+V VD T ++ NLI S RQ++S +L+ E IS +G
Sbjct: 155 QGGVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQG 197
>pdb|2WPQ|A Chain A, Salmonella Enterica Sada 479-519 Fused To Gcn4 Adaptors (
Sadak3, In-Register Fusion)
pdb|2WPQ|B Chain B, Salmonella Enterica Sada 479-519 Fused To Gcn4 Adaptors (
Sadak3, In-Register Fusion)
pdb|2WPQ|C Chain C, Salmonella Enterica Sada 479-519 Fused To Gcn4 Adaptors (
Sadak3, In-Register Fusion)
Length = 99
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 66 LARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQSSSLGGIN 125
+ +I IE + H+E ++++ + FD KVD D+ S+ Q+++ N
Sbjct: 1 MKQIEDKIEEILSKIYHIENEIARIKKLIFDTNEKVDQNTADITTNTNSINQNTTDIATN 60
Query: 126 LLTENNIS 133
NN+S
Sbjct: 61 TTNINNLS 68
>pdb|3TCV|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
pdb|3TCV|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase
From Brucella Melitensis
Length = 246
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 433 KPEHRVFDPISTAVQPYQDQEYQPIYFVAESFEDAKEKFRRWVSTMSRPYEVRFNPYTQR 492
KPE ++F+ ++P Q++ F A S EDA+++F W+ F P+ +
Sbjct: 33 KPERKIFEGRYVRLEPLNAQKHGDELFAASSVEDAEQRF-TWLFETPPATRAEFEPWLDK 91
Query: 493 VEVLD 497
D
Sbjct: 92 ASKSD 96
>pdb|3EOJ|A Chain A, Fmo Protein From Prosthecochloris Aestuarii 2k At 1.3a
Resolution
Length = 366
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 90 MAGIQF-DVLVKVDMTRRDLLNLIRSLRQSSSLGGINL 126
M G QF D+L+KV + DL++ +QS S GG N
Sbjct: 139 MQGRQFHDILMKVPLDNNDLVDTWEGFQQSISGGGANF 176
>pdb|2UZZ|A Chain A, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|B Chain B, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|C Chain C, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|D Chain D, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
Length = 372
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 183 AFKYNGDPIPHIDYTDSEYATWKAVFNT---VLDLMPKHFCQEYKDVFAMLQAEGIFT 237
A +++ D + I+ D EY KA+ V DL+P+ Q + VFA QA+G ++
Sbjct: 174 AIRHDDDGVT-IETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYS 230
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase
From Escherichia Coli With Its Reaction Products
pdb|1PFK|B Chain B, Crystal Structure Of The Complex Of Phosphofructokinase
From Escherichia Coli With Its Reaction Products
pdb|2PFK|A Chain A, The Crystal Structure Of Unliganded Phosphofructokinase
From Escherichia Coli
pdb|2PFK|B Chain B, The Crystal Structure Of Unliganded Phosphofructokinase
From Escherichia Coli
pdb|2PFK|C Chain C, The Crystal Structure Of Unliganded Phosphofructokinase
From Escherichia Coli
pdb|2PFK|D Chain D, The Crystal Structure Of Unliganded Phosphofructokinase
From Escherichia Coli
Length = 320
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 58 RMREGMSSLARILKTIEVFKGTVVHLETRVSKMAGIQFDVLVKVDMTRRDLLNLIRSLRQ 117
R+R+ SS RI +EV L + G +F V+ +V+ +R DL+N I++
Sbjct: 153 RLRDTSSSHQRI-SVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIA 211
Query: 118 SSSLGGINLLTENNISVKGPWFPTHASDLDNCNHLMTK 155
I +TE H D+D H + K
Sbjct: 212 KGKKHAIVAITE------------HMCDVDELAHFIEK 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,161,398
Number of Sequences: 62578
Number of extensions: 563908
Number of successful extensions: 1418
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1354
Number of HSP's gapped (non-prelim): 51
length of query: 532
length of database: 14,973,337
effective HSP length: 103
effective length of query: 429
effective length of database: 8,527,803
effective search space: 3658427487
effective search space used: 3658427487
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)