BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1423
(125 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/57 (87%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLLKALQTLNI+L ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 26 QEQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/57 (87%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLLKALQTLNI+L ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 26 QEQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 54/57 (94%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L+ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 80
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 54/57 (94%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L+ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 80
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 54/57 (94%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L+ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 80
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 26 QDQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 26 QDQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLKALQTLNI+L ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 26 QDQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLLK LQTLNI+L +LTKT IGMTVN LRKSSKDDEVI+L+KTLIKNWKKF+
Sbjct: 25 QEQALDLLKQLQTLNINLEVLTKTRIGMTVNALRKSSKDDEVISLSKTLIKNWKKFL 81
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLK LQTLNI+L+ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKTLQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 80
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLLKALQ+LNI+L+ILTKT IGMTVN LRKSSKD+EVI LAKTLIKNWK+F+
Sbjct: 25 QEQALDLLKALQSLNINLDILTKTRIGMTVNELRKSSKDEEVIALAKTLIKNWKRFL 81
>gi|195579328|ref|XP_002079514.1| GD21971 [Drosophila simulans]
gi|194191523|gb|EDX05099.1| GD21971 [Drosophila simulans]
Length = 147
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLK LQTLNI+L+ILTKT IGMTVN LRKSSKDDEVI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKTLQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 80
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 52/57 (91%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLK LQTLNI+L ILTKT IGMTVN LRKSSKDD+VI LAKTLIKNWK+F+
Sbjct: 24 QDQALDLLKTLQTLNINLEILTKTRIGMTVNELRKSSKDDDVIALAKTLIKNWKRFL 80
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K TS D TG QEQALDLL+ LQ LNIDL+ILTKT IGMTVN LRK SKDDEVI+LA
Sbjct: 16 KMTSSDG--TG---QEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLA 70
Query: 93 KTLIKNWKKFI 103
KTLIK+WK+F+
Sbjct: 71 KTLIKSWKRFL 81
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLL+ LQ LNIDL+ILTKT IGMTVN LRK SKDDEVI+LAK+LIK+WK+F+
Sbjct: 26 QEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLAKSLIKSWKRFL 82
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+QALDLLK LQTL+I+L ILTKT IGMTVN LRKSSKD+EVI LAKTLIKNWK+F+
Sbjct: 26 QDQALDLLKTLQTLSINLEILTKTRIGMTVNELRKSSKDEEVIALAKTLIKNWKRFL 82
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 53/57 (92%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE+AL+LLKALQT+ I+L++LTKT IGMTVN LRKSSKDDEVI+L KTLIKNWKKF+
Sbjct: 25 QEEALELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 81
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLL+ LQ LNIDL+ILTKT IGMTVN LRK SKDDEVI+LAK+LIK+WK+F+
Sbjct: 22 QEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLAKSLIKSWKRFL 78
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQALDLL+ LQ LNIDL+ILTKT IGMTVN LRK SKDDEVI+LAK+LIK+WK+F+
Sbjct: 26 QEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLAKSLIKSWKRFL 82
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 59/71 (83%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K TS D TG QE+AL+LLKALQT+ I+L++LTKT IGMTVN LRKSSKD+EVI+L
Sbjct: 16 KMTSDDG--TG---QEEALELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDEEVISLC 70
Query: 93 KTLIKNWKKFI 103
KTLIKNWKKF+
Sbjct: 71 KTLIKNWKKFL 81
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K +SGD TG QEQAL+LLK LQ L +DL +LTKT IGMTVN LRKSS+D+EVI+LA
Sbjct: 16 KMSSGDG--TG---QEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLA 70
Query: 93 KTLIKNWKKFI 103
KTLIKNWKKF+
Sbjct: 71 KTLIKNWKKFL 81
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K +SGD TG QEQAL+LLK LQ L +DL +LTKT IGMTVN LRKSS+D+EVI+LA
Sbjct: 16 KMSSGDG--TG---QEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLA 70
Query: 93 KTLIKNWKKFI 103
KTLIKNWKKF+
Sbjct: 71 KTLIKNWKKFL 81
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 58/71 (81%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K +SGD TG QEQAL+LLK LQ L ++L +LTKT IGMTVN LRKSSKD+EVI+L+
Sbjct: 16 KMSSGDG--TG---QEQALELLKILQKLPVNLELLTKTRIGMTVNALRKSSKDEEVISLS 70
Query: 93 KTLIKNWKKFI 103
KTLIKNWKKF+
Sbjct: 71 KTLIKNWKKFL 81
>gi|322786325|gb|EFZ12875.1| hypothetical protein SINV_07819 [Solenopsis invicta]
Length = 79
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 51/57 (89%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQAL+LLK LQ L +DL +LTKT IGMTVN LRKSS+D+EVI+L+KTLIKNWKKF+
Sbjct: 20 QEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLSKTLIKNWKKFL 76
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 51/57 (89%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QEQAL+LLK LQ L +DL +LTKT IGMTVN LRKSS+D+EVI+L+KTLIKNWKKF+
Sbjct: 2 QEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDEEVISLSKTLIKNWKKFL 58
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 49/57 (85%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
++QALDLLK LQ L + L ILTKT IGMTVN LRKSS DDEVI+L+KTLIKNWKKF+
Sbjct: 6 EDQALDLLKELQNLPVTLEILTKTRIGMTVNELRKSSSDDEVISLSKTLIKNWKKFL 62
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 5/71 (7%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K +SGD TG QEQAL+LLK LQ L ++L +L KT IGMTVN LRKSSKD+EVI+L+
Sbjct: 16 KMSSGDG--TG---QEQALELLKTLQKLPVNLELLQKTRIGMTVNALRKSSKDEEVISLS 70
Query: 93 KTLIKNWKKFI 103
KTLIKNWKKF+
Sbjct: 71 KTLIKNWKKFL 81
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 48/61 (78%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G Q QALD+LK LQ L I L IL KTHIG+TVN LRKSS+DDEVI LAKTL+KNWKK
Sbjct: 21 GSGGQSQALDMLKQLQRLPITLEILQKTHIGLTVNTLRKSSQDDEVILLAKTLVKNWKKL 80
Query: 103 I 103
I
Sbjct: 81 I 81
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QALDLLK L L I+LNILT T IGMTVNNLRK+SK++EV+ +AK+LIK WKKF+
Sbjct: 28 QALDLLKVLGRLKINLNILTNTRIGMTVNNLRKTSKEEEVVTVAKSLIKTWKKFV 82
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QALDLLK L L I+L+ILT T IGMTVNNLRK SKD+EV+ +AK+LIK WKKF+
Sbjct: 26 QALDLLKVLGRLKINLDILTVTRIGMTVNNLRKKSKDEEVVTVAKSLIKTWKKFV 80
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QALDLLK L L I+L ILT T +GMTVNNLRK+SK++EV+ +AK+LIK WKKF+
Sbjct: 26 QALDLLKVLGRLKINLTILTSTRVGMTVNNLRKTSKEEEVVTVAKSLIKTWKKFV 80
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 45/57 (78%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q QALDLLK LQ L I L IL +T IGMTVN+LRKSS D+EVI LAK LIK+WKK +
Sbjct: 47 QTQALDLLKNLQELPITLEILQRTRIGMTVNSLRKSSSDEEVITLAKVLIKSWKKLL 103
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 45/57 (78%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q QALDLLK LQ L I L IL +T IGMTVN+LRKSS D+EVI LAK LIK+WKK +
Sbjct: 30 QTQALDLLKNLQELPITLEILQRTRIGMTVNSLRKSSNDEEVITLAKVLIKSWKKLL 86
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QALDLL+ LQ L+IDL+ILTKT IGMTVN LRK SKDDEVINLAKTLIK+WK+F+
Sbjct: 7 QALDLLRQLQRLSIDLDILTKTRIGMTVNELRKCSKDDEVINLAKTLIKSWKRFL 61
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALD+L L+ L ++L +LTKT IG+TVN RKS K+DEV+NLAK++IK WKKF+
Sbjct: 28 ALDMLNQLRKLPMNLQVLTKTKIGVTVNQFRKSVKEDEVVNLAKSIIKGWKKFL 81
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+E ALD+LK+L+ L + L+IL KT IGM+VNNLRKSS +EV +LAK+LIK+WKK +
Sbjct: 250 KENALDILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL 306
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALD+LK+L+ L + L+IL KT IGM+VNNLRKSS +EV +LAK+LIK+WKK +
Sbjct: 2 ENALDILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL 57
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 46/57 (80%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q+ A+DLLK L+++ I L++L T IGM+VN LRK S DDEVI+LAK+LIK+WKK +
Sbjct: 88 QDGAVDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLL 144
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q++ALD LKAL+ L I+L +LT T IGMTVN +RK S++DEV NL K LIK WKK +
Sbjct: 24 QDEALDYLKALKDLPINLAVLTSTRIGMTVNAIRKKSENDEVNNLTKALIKKWKKLL 80
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 31 QEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 87
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE A+DLL+ L+ + + L++L T +GM+VN LRK S D+EV+ LAK+LIK+WKK +
Sbjct: 60 QEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 116
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLLK L+++ I L++L T IGM+VN LRK S DDEVI+LAK+LIK+WKK +
Sbjct: 27 AMDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLL 80
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLLK L+++ I L++L T IGM+VN LRK S DDEVI+LAK+LIK+WKK +
Sbjct: 27 AMDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLL 80
>gi|29791737|gb|AAH50623.1| TCEA2 protein [Homo sapiens]
gi|119595575|gb|EAW75169.1| transcription elongation factor A (SII), 2, isoform CRA_b [Homo
sapiens]
Length = 242
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWKKLL 79
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 45/58 (77%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
E ALDLLK L++L + L +L +T IGM+VN++RK D+EVI+LAK LIK+WK+ + P
Sbjct: 24 EGALDLLKELRSLKMTLKLLQETRIGMSVNSIRKHCTDEEVISLAKLLIKDWKRLLDP 81
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 81 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 136
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLL+ L+ + + LN+L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 1 AVDLLRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 54
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 1 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 56
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EV+ LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 80
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+K+ E A+DLLK L+++ + L++L T IGM+VN LRK S D+EVI+LAK+LIK+
Sbjct: 15 DKMVAKKNAEGAMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKS 74
Query: 99 WKKFI 103
WKK +
Sbjct: 75 WKKLL 79
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+K+ E A+DLLK L+++ + L++L T IGM+VN LRK S D+EVI+LAK+LIK+
Sbjct: 15 DKMVAKKNAEGAMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKS 74
Query: 99 WKKFI 103
WKK +
Sbjct: 75 WKKLL 79
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EV+ LAK+LIK+WKK +
Sbjct: 1 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 56
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EV+ LAK+LIK+WKK +
Sbjct: 25 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 80
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 48 EQALDLLKALQTLN--IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E +L LLK L++LN I L +L KT IGM VNNLRK S +E+INLAK LIK WKK +
Sbjct: 26 EDSLQLLKELRSLNNTITLEVLQKTRIGMAVNNLRKQSDQEEIINLAKVLIKGWKKLL 83
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 317 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 372
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLL+ L+ + I L +L TH+GM+VN LRK S D+E+I L+K+LIK+WKK +
Sbjct: 27 ALDLLRELKNMPITLELLQSTHVGMSVNALRKQSNDNEIITLSKSLIKSWKKLL 80
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLLK L+++ + L++L T IGM+VN LRK S D+EVI+LAK+LIK+WKK +
Sbjct: 3 AMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLL 56
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 19/91 (20%)
Query: 13 WSKTRRPKRNLIGSAMLTKKKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHI 72
W ++ RP+ +L G + QE ALDLLK L + + + +L T I
Sbjct: 46 WGRSHRPQPSLCG-------------------LPQEGALDLLKKLNSCEMSIQLLQTTRI 86
Query: 73 GMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
G+ VN +RK D EV++LAK LI+NWK+ +
Sbjct: 87 GVAVNGVRKHCSDKEVVSLAKVLIRNWKRLL 117
>gi|225717168|gb|ACO14430.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 226
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S DDEV +LAK LIK+WKK +
Sbjct: 28 ALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKKLL 81
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L++QE ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 29 LLQQEGALDLLKKLNSCQMSIQLLQTTRIGVAVNRVRKHCSDKEVVSLAKVLIKNWKRLL 88
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLLK L+++ + L++L T IGM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 26 AMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 79
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%)
Query: 41 LTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+ G + AL+LL AL +L I++N+LTKT IGMTVN+LRK S D+ V AK LIK WK
Sbjct: 19 IQGTKSMDSALELLDALSSLPINVNVLTKTRIGMTVNDLRKKSTDEHVSKRAKNLIKEWK 78
Query: 101 KFI 103
+
Sbjct: 79 TLL 81
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLLK L+++ I L++L T IGM+VN LRK S D++VI LAK+LIK WKK +
Sbjct: 24 EGAMDLLKELKSMPITLHLLQSTRIGMSVNALRKQSTDEDVIALAKSLIKAWKKLL 79
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
A++LL AL L ID+NILTKT IGMT+N+LRK + D+++ AK LIK WK
Sbjct: 28 AMELLDALAALPIDINILTKTRIGMTINDLRKKTSDEQIAKRAKVLIKEWK 78
>gi|149033908|gb|EDL88691.1| transcription elongation factor A (SII), 2 [Rattus norvegicus]
Length = 180
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E+ALDLLK+LQ + + L++L K+H+G++VN LRK D EV + K LIK WKK +
Sbjct: 26 EKALDLLKSLQEMPMTLDLLQKSHVGLSVNTLRKKCSDSEVSGVGKKLIKQWKKLL 81
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 45 VRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+Q ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 30 TQQAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 88
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLL+ L+ N+ L +L T IGM+VN +RK D++V+NLAK LIKNWK+ +
Sbjct: 26 ALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVVNLAKILIKNWKRLL 79
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 41 LTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+ G + A++LL AL L +D+NILTKT IGMT+N+LRK + D+ + AK LIK WK
Sbjct: 19 IQGTKTMDDAMELLDALSALPVDINILTKTRIGMTINDLRKKTSDEHIAKRAKALIKEWK 78
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+++ + L +L T IGM+VN +RK S DDEV +LAK LIK+WKK +
Sbjct: 28 ALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKKLL 81
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 4 QEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 60
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWKKLL 53
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + I L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 24 EGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLLK L+ +N+ L +L +T IGM+VN +RK D+EVI LAK LIK+WK+ +
Sbjct: 24 EGAIDLLKELKGVNMTLKLLQETRIGMSVNGIRKHCTDEEVIALAKVLIKDWKRLL 79
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK S+D+EVI LAK LIKNWK+ +
Sbjct: 19 EGALDLLKRLNSCTMTIQLLQTTRIGIAVNTIRKHSRDEEVIALAKVLIKNWKRLL 74
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S DDEV +LAK LIK+WKK +
Sbjct: 28 ALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKKLL 81
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ ALD+LKAL+ + I+L+ L KT IGM+VNN+RK + +DEV AK LIK WKK +
Sbjct: 26 DNALDVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEVAIAAKQLIKGWKKLV 81
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 46 RQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
R E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 166 RAEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 223
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+DLL+ L+ + I L++L T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 53
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 25 GSAMLTKKKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSK 84
G A+ T+ R +G R ALDLLK L+ + + L +L T IGM+VN +RK S
Sbjct: 66 GEALPTEHSRWYNLGPYSG--RAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 123
Query: 85 DDEVINLAKTLIKNWKKFI 103
D+EV +LAK+LIK+WKK +
Sbjct: 124 DEEVTSLAKSLIKSWKKLL 142
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E A+DLL+ L+ + + L++L T +GM+VN LRK S D+ VI LAK+LIK+WKK +
Sbjct: 33 EGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKLL 88
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S DDEV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKSLIKSWKKLL 81
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+++ + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 30 QEGALDLLKKLSSCRMSVQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 86
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 35 TSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKT 94
S D +L G ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+
Sbjct: 56 ASVDARLAGA--SAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKS 113
Query: 95 LIKNWKKFI 103
LIK+WKK +
Sbjct: 114 LIKSWKKLL 122
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+++ + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ L + L +L T IGM+VN +RK S DD+V +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSSDDDVASLAKSLIKSWKKLL 81
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+++ + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+DLLK L+++ + L++L T IGM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 1 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKKLL 53
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 81
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLL+ L+ + + L +L T +GM+VN +RK S D+EV N+AK+LIK+WKK +
Sbjct: 26 ALDLLRELRNMKMSLEMLQSTRVGMSVNAVRKQSSDEEVQNIAKSLIKSWKKLL 79
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 121 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 174
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 72 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 125
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNW
Sbjct: 16 KMVARKKTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|380792457|gb|AFE68104.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 168
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK LQ + + L L T +GM+VN +RK S D+EV LAK+LIK+WK+ +
Sbjct: 24 EGALDLLKELQNIKMSLETLQSTRVGMSVNAVRKQSSDEEVQTLAKSLIKSWKRLL 79
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 46 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 99
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 109 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 162
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLL+ L++ N+ L +L +T IG++VN++RK D+EVI LAK LIK+WK+ +
Sbjct: 26 AMDLLRELKSFNMTLKLLQETRIGVSVNSIRKHCADEEVIALAKVLIKDWKRLL 79
>gi|48476355|gb|AAT44402.1| rhabdomyosarcoma antigen MU-RMS-40.22 [Homo sapiens]
Length = 154
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|119607147|gb|EAW86741.1| transcription elongation factor A (SII), 1, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 10 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 63
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
>gi|108999103|ref|XP_001112160.1| PREDICTED: transcription elongation factor A protein 3 [Macaca
mulatta]
Length = 248
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|444728031|gb|ELW68495.1| Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
3 [Tupaia chinensis]
Length = 1027
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNW
Sbjct: 942 KMVARKSTEGALDLLKKLNSCRMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 1001
Query: 100 KKFIRPY-VWR 109
K+ + + +WR
Sbjct: 1002 KRLLDGFWMWR 1012
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 3 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 10 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 63
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 38 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 91
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 13 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 66
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLL+ L+ + I L +L T +GM+VN LRK S D+E+I ++K+LIK+WKK +
Sbjct: 27 ALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLL 80
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLL+ L++ N+ L +L +T IG++VN++RK D+EVI LAK LIK+WK+ +
Sbjct: 26 AMDLLRELKSFNMTLRLLQETRIGVSVNSIRKHCTDEEVIALAKVLIKDWKRLL 79
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 3 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 77
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 3 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNW
Sbjct: 16 KMVARKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLL+ L+ + I L +L T +GM+VN LRK S D+E+I ++K+LIK+WKK +
Sbjct: 27 ALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLL 80
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 41 LTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+TG +E ALDLLK L + + +L T IG+ VN +RK D EV+ LAK LIKNWK
Sbjct: 21 VTGASTEEGALDLLKKLNGYKMSIQLLQTTRIGIAVNGVRKHCLDKEVVALAKILIKNWK 80
Query: 101 KFI 103
+ +
Sbjct: 81 RLL 83
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 13 ALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 66
>gi|431891277|gb|ELK02154.1| Transcription elongation factor A protein 3 [Pteropus alecto]
Length = 264
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNW
Sbjct: 16 KMVARKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ L + L +L T IGM+VN +RK S ++EV +LAK+LIK+WKK +
Sbjct: 28 ALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLL 81
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 46 RQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 22 KTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNW
Sbjct: 16 KMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 1 EAALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 56
>gi|239791469|dbj|BAH72195.1| ACYPI005512 [Acyrthosiphon pisum]
Length = 106
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
I L+ILTKT +GMTVN+ RKS KD+EVI +K LIKNWKK +
Sbjct: 39 ITLDILTKTRVGMTVNSFRKSCKDEEVITFSKALIKNWKKLL 80
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+E+ +LAK+LIK+WKK +
Sbjct: 26 ALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEITSLAKSLIKSWKKLL 79
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 41 ALDLLKELKNILMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 94
>gi|159163424|pdb|1WJT|A Chain A, Solution Structure Of The N-Terminal Domain I Of Mouse
Transcription Elongation Factor S-Ii Protein 3
Length = 103
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 46 RQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 29 KTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 86
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 1 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 56
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLDSCQMSIRLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+DLL+ L+ + I L++L T +GM+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 1 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 53
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L++L + L +L T IGM+VN +RK S +++V +LAK+LIK+WKK +
Sbjct: 27 ALDLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKSLIKSWKKLL 80
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV+ LAK LIKNWK+ +
Sbjct: 24 EGALDLLKRLNSCQMSIQLLQTTRIGVAVNGVRKQCSDKEVVALAKVLIKNWKQLL 79
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A DLL L+ + + L +L KT IGMTVNN RK++ DE++ L+KTLIK+WKK +
Sbjct: 21 ADDLLNKLKDMPMTLTVLQKTRIGMTVNNFRKAASKDELVVLSKTLIKSWKKLL 74
>gi|431894647|gb|ELK04447.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 213
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
++LL+ L+ + + L++L T +G++VN LRK S D++VI LAK+LIK+WKK +
Sbjct: 1 MELLQELKAMPVTLHLLQSTRVGVSVNALRKHSSDEDVIALAKSLIKSWKKLL 53
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ V+ +RK D EV++LAK LIKNW
Sbjct: 16 KMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVSGVRKHCSDKEVVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+E ALDLLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 228 REGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 284
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D EV+ LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLDSYQMSIQLLQTTRIGVAVNGIRKHCSDKEVVALAKILIKNWKQLL 79
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ E ALDLLK L + + + +L T IG+ VN +RK D EV+ LAK LIKNW
Sbjct: 16 KMVARRNTEGALDLLKKLNSCPMSIQLLQTTRIGVAVNGVRKRCSDKEVVALAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ ALDLL+ L+ + + L L T +GM+VN +RK S ++EV LAKTLIK+WKK +
Sbjct: 24 DSALDLLRELKNIKMSLETLQSTRVGMSVNAVRKQSSNEEVQTLAKTLIKSWKKLL 79
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ L + L +L T IGM+VN +RK S +++V +LAK LIK+WKK +
Sbjct: 27 ALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKALIKSWKKLL 80
>gi|402587110|gb|EJW81046.1| hypothetical protein WUBG_08044, partial [Wuchereria bancrofti]
Length = 172
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 41 LTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+ G + A++LL AL L ID+NILTKT IGMT+N+LRK + D+ + AK LIK K
Sbjct: 18 IQGTKSMDDAMELLDALAALPIDINILTKTRIGMTINDLRKKTSDEHIAKRAKVLIKANK 77
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E AL LLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 24 EGALGLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 79
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
A+DLL+ L+ + + L L T IGM+VN +RK S D+EV LAK+LIK WKK +
Sbjct: 26 AIDLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWKKLL 79
>gi|395821365|ref|XP_003784013.1| PREDICTED: transcription elongation factor A protein 3 [Otolemur
garnettii]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK D E ++LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLHSSQMTIQLLQTTRIGVAVNGVRKHCSDKEAVSLAKVLIKNWKRLL 79
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK+L + + +L T IG+ VN++RK D+EV+ AK LIKNWK+ +
Sbjct: 24 EGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLL 79
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G E A DLL L+ L I L+IL KT IGMTVN LRK+S ++V +AK+LIK+WKK
Sbjct: 21 GNSNNESASDLLNQLKKLPITLDILQKTRIGMTVNVLRKASDREDVQIIAKSLIKSWKKL 80
Query: 103 I 103
+
Sbjct: 81 L 81
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
E ALDLL+ L+ + I L +L T + M+V L+K S D EVI LAK+LIK+WKK ++
Sbjct: 24 EGALDLLRELKAIPITLQLLRSTRVFMSVKALQKQSSDKEVIALAKSLIKSWKKLLK 80
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + +L T IG+ VN +RK D EV+ LAK LIKNWK+ +
Sbjct: 24 EGALDLLKKLSDYKMSIQLLQTTRIGIAVNGVRKHCLDKEVVALAKILIKNWKRLL 79
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D E ++LAK LIK W
Sbjct: 16 KMVARKKTEGALDLLKKLNSCQMSIQLLQTTRIGIAVNGVRKHCSDTEAVSLAKVLIKKW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 45 VRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E AL LK L+ + + L ILTKT +G+ +N +RK S+D EV L K +IK WKK +
Sbjct: 20 IDDESALKYLKRLRNIEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLV 78
>gi|76154247|gb|AAX25738.2| SJCHGC09202 protein [Schistosoma japonicum]
Length = 229
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 45 VRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E AL LK L+ + + L ILTKT +G+ +N +RK S+D EV L K +IK WKK +
Sbjct: 20 IDDESALKYLKRLRNIEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLV 78
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+K+ E ALDLLK+L + + +L T IG+ VN++RK D+EV+ AK LIKN
Sbjct: 15 DKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKN 74
Query: 99 WKKFI 103
WK+ +
Sbjct: 75 WKRLL 79
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ + + L +L T IGM+VN + K S ++EV +LAK+LIK+WKK +
Sbjct: 24 ALDLLKELKNIPMTLELLQSTRIGMSVNAICKQSTNEEVTSLAKSLIKSWKKLL 77
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E+A+DLL L+ L I L L KT IGM+VN +RK S + V LAK+LIK WKK +
Sbjct: 27 EEAVDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNSNVQTLAKSLIKLWKKLL 82
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 45 VRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E AL L+ L+++ + L ILTKT +G+ +N +RK S+D EV L K +IK WKK +
Sbjct: 20 IDDESALKYLRRLRSIEMTLEILTKTGVGIIINKIRKESEDPEVATLGKNMIKQWKKLV 78
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
ALDLLK L+ L + L +L T IGM+VN +RK S ++EV +LAK+LIK+WKK +
Sbjct: 16 ALDLLKELK-LPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLL 68
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+V E LDLL L+ L + L IL KT +G VNN+RK + + VINLAK+LIK+WK+ +
Sbjct: 22 IVDNEFILDLLTNLKDLKMTLEILQKTRVGYHVNNVRKKADKEVVINLAKSLIKDWKRLL 81
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 45 VRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
V +E AL+LLK L + + + +L T IG+ VN +RK D +V+ LAK LIKNWK+ +
Sbjct: 10 VLREGALELLKELSSCTMTIQLLQTTRIGVAVNAVRKRCPDQQVVALAKVLIKNWKRLL 68
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK D +++LAK LIKNW
Sbjct: 16 KMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKVLVSLAKVLIKNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KRLL 79
>gi|323650182|gb|ADX97177.1| transcription elongation factor a protein 3 [Perca flavescens]
Length = 66
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
E A+DLL+ L+ N+ L +L +T IGM+VN +RK D+EVI LAK LIK +K
Sbjct: 13 EGAMDLLRELKGFNMTLKLLQETRIGMSVNGIRKHCTDEEVIALAKILIKRLEK 66
>gi|432094022|gb|ELK25814.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 93
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+ L++L T +GM+VN LRK S D+EV LAK+LIK+WKK + P
Sbjct: 3 VTLHLLQSTRVGMSVNALRKQSSDEEVTALAKSLIKSWKKLLAP 46
>gi|312104463|ref|XP_003150406.1| hypothetical protein LOAG_14863 [Loa loa]
Length = 51
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIK 97
+ A++LL AL L +D+NILTKT IGMT+N+LRK + D+ + AK LIK
Sbjct: 2 DDAMELLDALSALPVDINILTKTRIGMTINDLRKKTSDEHIAKRAKALIK 51
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+K+ E ALDLLK+L + + +L T IG+ VN++RK D+EV+ AK LIKN
Sbjct: 15 DKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKN 74
Query: 99 WKKFI 103
WK+ +
Sbjct: 75 WKRLL 79
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 46 RQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ E ALDLLK L + + + +L T IG+ VN +RK + EV+ LAK LI+NWK+ +
Sbjct: 22 KTEGALDLLKKLDSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLL 79
>gi|449283630|gb|EMC90235.1| Transcription elongation factor B polypeptide 3, partial [Columba
livia]
Length = 596
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
Q ++ LK LQ L+I L+IL +T IG TVN+ RK + N+AKTL+K WKK I P
Sbjct: 16 QIVETLKVLQDLDISLDILVETGIGKTVNSFRKHAT---AGNVAKTLVKQWKKLISP 69
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
K+ + E ALDLLK L + + + +L T IG+ VN +RK + EV+ LAK LI+NW
Sbjct: 16 KMVARKKTEGALDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNW 75
Query: 100 KKFI 103
K+ +
Sbjct: 76 KQLL 79
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
LDLLK L + + + +L T IG+ VN +RK D EV+ +AK LIKNWK+ +
Sbjct: 27 LDLLKKLGSYQMSIRLLQTTKIGVAVNGVRKHCSDKEVVAMAKVLIKNWKQLL 79
>gi|358338815|dbj|GAA57372.1| transcription elongation factor S-II [Clonorchis sinensis]
Length = 132
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+E AL LK L+ + + L+ILTKT +G+ +N +RK S + E+ L K +IK WKK +
Sbjct: 35 EESALKYLKRLRGVEMTLDILTKTGVGIIINKIRKESGNSEIATLGKNIIKQWKKLV 91
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E ALDLLK L + + + +L T IG+ VN +RK + EV+ LAK LI+NWK+ +
Sbjct: 1 EGALDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLL 56
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
LLK L + + + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 1 LLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 51
>gi|118088956|ref|XP_419908.2| PREDICTED: transcription elongation factor B polypeptide 3 [Gallus
gallus]
Length = 598
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
Query: 48 EQALDLLKAL---QTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
E+ ++LKAL Q L+I L+ILT+T IG TVN+ RK + N+AK+L+K WKK +
Sbjct: 23 EEPAEILKALELLQDLDISLDILTETGIGKTVNSFRKHAT---AGNVAKSLVKKWKKLLP 79
Query: 105 P 105
P
Sbjct: 80 P 80
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 38 DNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIK 97
D + G ++ A+D+LK L+ + + +L KT IGMTVN LRK + D + AK LI+
Sbjct: 49 DKVVNGEKSEQSAMDILKILRATPMTVELLQKTRIGMTVNELRKKTTDRSLQVEAKNLIR 108
Query: 98 NWKKFI 103
+WKK I
Sbjct: 109 HWKKLI 114
>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
Length = 1033
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
E+ L +L+ LQ L+I L+ILT+T IG TVN+ RK + N+AK+L+K WKK I P
Sbjct: 20 EKILRVLELLQDLDISLDILTETGIGKTVNSFRKHAT---AGNVAKSLVKKWKKLIPP 74
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L+LLK LQ + +++ +L T +G+TVN ++K S + +VI LA +IK+WKK
Sbjct: 27 LELLKELQAIEVNVTLLRSTRVGVTVNKIKKKSDERKVIELATAIIKDWKKIF 79
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L+LLK LQ + +++ +L T +G+TVN ++K S + +VI LA +IK+WKK
Sbjct: 27 LELLKELQAIEVNVTLLRSTRVGVTVNKIKKKSDERKVIELATAIIKDWKKIF 79
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L+LLK LQ + +++ +L T +G+TVN ++K S + +VI LA +IK+WKK
Sbjct: 27 LELLKELQAIEVNVTLLRSTRVGVTVNKIKKKSDERKVIELATAIIKDWKKIF 79
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 47 QEQALDLLKALQTLNI--DLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ + K + +NI L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 2 EDEVVRFAKKMDKMNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 60
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 64 LNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +L T IGM+VN LRK S D+EV +LAK+LIK+WKK +
Sbjct: 3 LELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLL 42
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L+LLK LQ + + +L T IG+TVN ++K S + +V LAK +IK+WKK +
Sbjct: 27 LELLKELQAFEVTVPLLRSTRIGVTVNKIKKKSDERKVTELAKAIIKDWKKIL 79
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 64 LNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 3 LELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 42
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+VR+E A N + +L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 37 VVRKEIACKYC-----TNFFVLVLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 91
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
T IGM+VN +RK S D+EV +LAK+LIK+WKK + P
Sbjct: 117 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLVP 152
>gi|260799411|ref|XP_002594690.1| hypothetical protein BRAFLDRAFT_101450 [Branchiostoma floridae]
gi|229279926|gb|EEN50701.1| hypothetical protein BRAFLDRAFT_101450 [Branchiostoma floridae]
Length = 712
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 42/63 (66%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
N + + + + +L++L+ +I + +L KT IG VNN+R++S ++EVI+LAK ++
Sbjct: 17 NAMVSEGKTDDTIAILRSLRDEDISVRLLKKTQIGRAVNNVRRNSSNEEVISLAKKIVNK 76
Query: 99 WKK 101
W++
Sbjct: 77 WRR 79
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 67 LTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 1 LQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 37
>gi|68390501|ref|XP_696087.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Danio rerio]
gi|325530294|sp|B0UYI1.1|TEAN2_DANRE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
Length = 210
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++ LK L +L T IG TVNNLRK S D E+ +LAK + K+W+ FI +
Sbjct: 55 KENMIEALKELDKKVPSREVLKSTRIGHTVNNLRKHSDDPEIKSLAKEVYKHWRTFIEEH 114
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 68 TKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ T +GM+VN LRK S D+EVI LAK+LIK+WKK +
Sbjct: 189 SSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 224
>gi|194374147|dbj|BAG62386.1| unnamed protein product [Homo sapiens]
Length = 123
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ + +L T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 1 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 42
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 46 RQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
++E+ L + K L+ + N T T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 3 QEEELLRIAKKLEKMVARKN--TTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 58
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 3 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 36
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|149020697|gb|EDL78502.1| rCG64124 [Rattus norvegicus]
Length = 189
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
D+ K L+ + + L +L T G +VN + K S D+EVI+LAK+LIK+WK
Sbjct: 15 DMPKELKNICMPLELLQSTRFGKSVNAILKQSTDEEVISLAKSLIKSWK 63
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN +RK S D+EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 56
>gi|42567655|ref|NP_196133.3| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|75170631|sp|Q9FHK9.1|MD26B_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26b
gi|9759255|dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana]
gi|332003450|gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 436
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
LD L+ L+ ++++++IL T IG VN LRK S D ++ LAKTLI WK+ + +V
Sbjct: 160 LDSLRHLKLMSLNVDILKSTEIGKAVNGLRKHSSD-KIRQLAKTLIAEWKELVDQWV 215
>gi|297829634|ref|XP_002882699.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
gi|297328539|gb|EFH58958.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+++++ ++IL T IG VN LR+ S D ++ LAKTL WKK + + M
Sbjct: 130 LESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSD-KISKLAKTLFAEWKKLVDQW---M 185
Query: 111 NLPQDVV 117
N P+++
Sbjct: 186 NTPEEMA 192
>gi|431891270|gb|ELK02147.1| Transcription elongation factor B polypeptide 3 [Pteropus alecto]
Length = 776
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 35 TSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKT 94
TSG G V + L LK L TL I ++IL +T +G TVN+LRK + V N A+
Sbjct: 15 TSGPILNVGFV---ELLKYLKKLSTLPITVDILAETGVGKTVNSLRKH---EHVGNFARD 68
Query: 95 LIKNWKKFI 103
L+ WKK +
Sbjct: 69 LVAQWKKLV 77
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G+ EQ LL L + + + I+ KT+IG+ VN +RK DD V AK +IK+WK
Sbjct: 21 GMESVEQCNKLLDQLSKIPMSIEIIQKTNIGIKVNMMRKKVTDDAVAKRAKNIIKDWKNV 80
Query: 103 I 103
+
Sbjct: 81 V 81
>gi|345319319|ref|XP_001520358.2| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Ornithorhynchus anatinus]
Length = 792
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N++RK +K++E+ AK L++NW+K I P
Sbjct: 220 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRNWQKLIEPVAQNE 279
Query: 111 NLPQ 114
+P+
Sbjct: 280 AVPR 283
>gi|348507256|ref|XP_003441172.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oreochromis niloticus]
Length = 627
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +L+ L+ L+I L++L +T IG TVN+LR+ + E LAK+L+K WKK +
Sbjct: 28 LKILQKLKDLDITLDVLAETGIGKTVNSLRRHEQAGE---LAKSLVKGWKKLL 77
>gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+++++ ++IL T IG VN LR+ S D ++ LAKTL WK+ + + M
Sbjct: 129 LESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSD-KISKLAKTLFAEWKRLVDQW---M 184
Query: 111 NLPQDVV 117
N P+++
Sbjct: 185 NTPEEMA 191
>gi|186509965|ref|NP_187693.2| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|332641438|gb|AEE74959.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 288
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+++++ ++IL T IG VN LR+ S D ++ LAKTL WK+ + + M
Sbjct: 129 LESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSD-KISKLAKTLFAEWKRLVDQW---M 184
Query: 111 NLPQDVV 117
N P+++
Sbjct: 185 NTPEEMA 191
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G+ E + LL L + + + I+ KT+IG+ VN +RK D+ + AK +IK WK
Sbjct: 21 GMESAEDCIKLLDELAKIPMSVEIIQKTNIGIKVNTMRKKVSDEAIAKRAKNIIKEWKNI 80
Query: 103 I 103
+
Sbjct: 81 V 81
>gi|334185233|ref|NP_001189856.1| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|395406778|sp|F4J4Y5.1|MD26A_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26a
gi|332641439|gb|AEE74960.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 580
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+++++ ++IL T IG VN LR+ S D ++ LAKTL WK+ + + M
Sbjct: 129 LESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSD-KISKLAKTLFAEWKRLVDQW---M 184
Query: 111 NLPQDV 116
N P+++
Sbjct: 185 NTPEEM 190
>gi|301610738|ref|XP_002934911.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Xenopus (Silurana) tropicalis]
Length = 508
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 54 LKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +L+ L+I L+IL +T IG TVN LRK S EV ++AK+++ WKK +
Sbjct: 30 LSSLKELDITLDILVETGIGKTVNGLRKHS---EVGDVAKSIVIQWKKLV 76
>gi|301754948|ref|XP_002913387.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Ailuropoda melanoleuca]
Length = 756
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L LK L TL I ++IL +T +G TVN+LRK + V + A+ L+ WKK + V R
Sbjct: 9 LKYLKKLSTLPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLVP--VERN 63
Query: 111 NLPQD 115
P D
Sbjct: 64 TEPDD 68
>gi|405964907|gb|EKC30346.1| Mediator of RNA polymerase II transcription subunit 26 [Crassostrea
gigas]
Length = 650
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
L ++ L+T I ++L +T IG VN LRK + ++++ AK L++NW+K I P V
Sbjct: 47 LAVITILETYPITRDVLEQTRIGKYVNELRKKTDNEQLAKRAKKLVRNWQKLINPEV 103
>gi|297806513|ref|XP_002871140.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
gi|297316977|gb|EFH47399.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
Length = 436
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
LD L+ L+ ++++++IL T IG VN LRK D ++ LAKTLI WK+ + +V
Sbjct: 160 LDSLRHLKLMSLNVDILKSTEIGKAVNGLRKHGSD-KIRQLAKTLIAEWKELVDQWV 215
>gi|432911927|ref|XP_004078784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oryzias latipes]
Length = 592
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ L+ I L +T +G +N++RK +KD+++ AK L+KNW+K I P
Sbjct: 32 LEVINCLEKYPITKEALEETRLGKLINDIRKKTKDEDLAKRAKKLLKNWQKLIEP 86
>gi|47216408|emb|CAG01959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ L+ I L +T +G +N++RK +KD+++ AK L++NW+K I P
Sbjct: 32 LEVISCLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIEP 86
>gi|432095529|gb|ELK26681.1| Mediator of RNA polymerase II transcription subunit 26 [Myotis
davidii]
Length = 513
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L++NW+K I P
Sbjct: 26 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRNWQKLIEP 80
>gi|345794043|ref|XP_535361.3| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3 [Canis lupus familiaris]
Length = 751
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L LK L TL I ++IL +T +G TVN+LRK + V + A+ L+ WKK +
Sbjct: 9 LKYLKKLSTLPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLV 58
>gi|14589373|gb|AAK70628.1|AC091238_6 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430561|gb|AAP52455.1| hypothetical protein LOC_Os10g10270 [Oryza sativa Japonica Group]
Length = 261
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+AL++ + L + IG T++ LR+ ++V LA L KNWK + +
Sbjct: 81 EETVVELLRALRSTPMTFETLEASRIGKTISGLRRKHSSEKVRGLAAALYKNWKAIVDEH 140
Query: 107 VWR 109
+ R
Sbjct: 141 LTR 143
>gi|224015651|ref|XP_002297475.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967841|gb|EED86214.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1059
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
++ DLL+ L +++ +IL KT I M V LR+ K+ + LAKTL++ WKK +
Sbjct: 298 DETFDLLEDLDDISMSADILAKTQIAMAVAQLRR-HKETTISGLAKTLVQKWKKAV 352
>gi|344248663|gb|EGW04767.1| Arf-GAP with SH3 domain, ANK repeat and PH domain-containing
protein 3 [Cricetulus griseus]
Length = 804
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IG+ VN +RK D EV++LAK LIKNWK+ +
Sbjct: 712 TRIGVAVNRVRKHCSDKEVVSLAKVLIKNWKRLL 745
>gi|118103328|ref|XP_001234571.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Gallus gallus]
Length = 602
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 32 KKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINL 91
K T D G+ L+++ +L+ I L +T +G +N +RK + ++E+
Sbjct: 2 KPVTKSDACFVGIHNMVAVLEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKR 61
Query: 92 AKTLIKNWKKFIRPYVWRMNLPQ 114
AK L++NW+K I P +P+
Sbjct: 62 AKKLLRNWQKLIEPVTPNEAVPR 84
>gi|47498086|ref|NP_998224.1| mediator of RNA polymerase II transcription subunit 26 [Danio
rerio]
gi|28279113|gb|AAH45849.1| Cofactor required for Sp1 transcriptional activation, subunit 7
[Danio rerio]
Length = 589
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
LD++ L+ I L +T +G +N++RK +KD+++ AK L++NW+K I P
Sbjct: 32 LDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIEP 86
>gi|14486363|gb|AAK61395.1| CRSP70 [Danio rerio]
Length = 589
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
LD++ L+ I L +T +G +N++RK +KD+++ AK L++NW+K I P
Sbjct: 32 LDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIEP 86
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 74 MTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
M VN+LRKSS D+EVI LAK LIK+WKK +
Sbjct: 1 MAVNSLRKSSNDEEVITLAKLLIKSWKKLL 30
>gi|158706142|sp|Q90YL3.2|MED26_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
Length = 589
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
LD++ L+ I L +T +G +N++RK +KD+++ AK L++NW+K I P
Sbjct: 32 LDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIEP 86
>gi|348500500|ref|XP_003437811.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oreochromis niloticus]
Length = 605
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ L+ I L +T +G +N++RK +KD+++ AK L++NW+K I P
Sbjct: 32 LEVIACLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIEP 86
>gi|410053425|ref|XP_003953452.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Pan troglodytes]
Length = 868
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 308 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 362
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+ALDLL+AL++ I +NIL +T +G TV LRK +++ N ++ LI +WK +
Sbjct: 24 EALDLLRALESKPITVNILKETKLGQTVAKLRKHD-SEKIQNQSRNLIHSWKSIL 77
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G E+ LL L + ++L I+ KT +GM +N +RK D+ + AK++IK WK
Sbjct: 19 GAESTEECSKLLDELAKIPMNLEIIQKTSVGMKLNAMRKKFPDEALAKRAKSIIKEWKNI 78
Query: 103 I 103
+
Sbjct: 79 V 79
>gi|348556968|ref|XP_003464292.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Cavia porcellus]
Length = 583
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G VN++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLERYPITKEALEETRLGKLVNDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|20043009|gb|AAM08817.1|AC090486_27 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|20303624|gb|AAM19051.1|AC099774_13 putative transcription factor [Oryza sativa Japonica Group]
gi|125574379|gb|EAZ15663.1| hypothetical protein OsJ_31076 [Oryza sativa Japonica Group]
Length = 276
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 37 GDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLI 96
G N + E ++LL+ALQ + + L + IG ++ LRK S ++V +LA L
Sbjct: 94 GGNPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHS-SEQVRDLAAALY 152
Query: 97 KNWKKFIRPYVWR 109
K+WK + ++ R
Sbjct: 153 KSWKALVDEHLTR 165
>gi|125555320|gb|EAZ00926.1| hypothetical protein OsI_22956 [Oryza sativa Indica Group]
Length = 276
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 37 GDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLI 96
G N + E ++LL+ALQ + + L + IG ++ LRK S ++V +LA L
Sbjct: 94 GGNPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHS-SEQVRDLAAALY 152
Query: 97 KNWKKFIRPYVWR 109
K+WK + ++ R
Sbjct: 153 KSWKALVDEHLTR 165
>gi|395848053|ref|XP_003796675.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Otolemur garnettii]
Length = 797
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 258 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 312
>gi|344282648|ref|XP_003413085.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Loxodonta africana]
Length = 596
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|410950824|ref|XP_003982103.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Felis catus]
Length = 472
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 10 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 64
>gi|351712954|gb|EHB15873.1| Mediator of RNA polymerase II transcription subunit 26, partial
[Heterocephalus glaber]
Length = 513
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G VN++RK +K++E+ AK L+++W+K I P
Sbjct: 8 LEVISSLERYPITKEALEETRLGKLVNDVRKKTKNEELAKRAKKLLRSWQKLIEP 62
>gi|301753823|ref|XP_002912824.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26-like [Ailuropoda melanoleuca]
Length = 579
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 13 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 67
>gi|449517160|ref|XP_004165614.1| PREDICTED: uncharacterized LOC101206878 [Cucumis sativus]
Length = 1629
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
L LL+AL L ++LN L ++G +VN+LR S K+ E+ A++L+ WKK
Sbjct: 387 LALLRALDKLPVNLNALQTCNVGKSVNHLR-SHKNSEIQKKARSLVDTWKK 436
>gi|449459488|ref|XP_004147478.1| PREDICTED: uncharacterized protein LOC101206878 [Cucumis sativus]
Length = 1629
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
L LL+AL L ++LN L ++G +VN+LR S K+ E+ A++L+ WKK
Sbjct: 387 LALLRALDKLPVNLNALQTCNVGKSVNHLR-SHKNSEIQKKARSLVDTWKK 436
>gi|449491840|ref|XP_002192819.2| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Taeniopygia guttata]
Length = 677
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N +RK + ++E+ AK L++NW+K I P
Sbjct: 101 LEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKRAKKLLRNWQKLIEPVTQNE 160
Query: 111 NLPQ 114
+P+
Sbjct: 161 PVPR 164
>gi|431921958|gb|ELK19131.1| Mediator of RNA polymerase II transcription subunit 26 [Pteropus
alecto]
Length = 572
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 5 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 59
>gi|126324073|ref|XP_001363132.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Monodelphis domestica]
Length = 612
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEPVTQNE 91
Query: 111 NLP 113
+P
Sbjct: 92 PVP 94
>gi|395513669|ref|XP_003761045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Sarcophilus harrisii]
Length = 585
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 5 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEPVTQNE 64
Query: 111 NLP 113
+P
Sbjct: 65 PVP 67
>gi|397484894|ref|XP_003813600.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 2 [Pan paniscus]
gi|397484896|ref|XP_003813601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 3 [Pan paniscus]
Length = 573
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 5 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 59
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K T GD + Q +AL++L+AL+ + IL +T +G TV LRK +++++ +LA
Sbjct: 13 KFTRGD-----VTDQGEALEVLRALEKTTVTYAILKETKMGHTVGKLRKH-ENEKIASLA 66
Query: 93 KTLIKNWK 100
+ L+K+WK
Sbjct: 67 RLLVKSWK 74
>gi|111494163|gb|AAI10431.1| Mediator complex subunit 26 [Homo sapiens]
Length = 600
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|417403185|gb|JAA48411.1| Putative mediator of rna polymerase ii transcription subunit 26
[Desmodus rotundus]
Length = 600
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|189054009|dbj|BAG36516.1| unnamed protein product [Homo sapiens]
Length = 600
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|355703281|gb|EHH29772.1| Mediator complex subunit 26, partial [Macaca mulatta]
Length = 577
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 9 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 63
>gi|332253423|ref|XP_003275841.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Nomascus leucogenys]
Length = 600
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|4220894|gb|AAD12722.1| transcriptional co-activator CRSP70 [Homo sapiens]
Length = 600
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|403303377|ref|XP_003942304.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Saimiri boliviensis boliviensis]
Length = 600
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|383422989|gb|AFH34708.1| mediator of RNA polymerase II transcription subunit 26 [Macaca
mulatta]
Length = 600
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|28558977|ref|NP_004822.2| mediator of RNA polymerase II transcription subunit 26 [Homo
sapiens]
gi|158931130|sp|O95402.2|MED26_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Activator-recruited cofactor 70 kDa
component; Short=ARC70; AltName: Full=Cofactor required
for Sp1 transcriptional activation subunit 7; Short=CRSP
complex subunit 7; AltName: Full=Mediator complex
subunit 26; AltName: Full=Transcriptional coactivator
CRSP70
gi|119604960|gb|EAW84554.1| cofactor required for Sp1 transcriptional activation, subunit 7,
70kDa [Homo sapiens]
gi|208966728|dbj|BAG73378.1| mediator complex subunit 26 [synthetic construct]
Length = 600
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|345787643|ref|XP_541963.3| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Canis lupus familiaris]
Length = 599
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|402904660|ref|XP_003915160.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Papio anubis]
Length = 600
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|397484892|ref|XP_003813599.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 1 [Pan paniscus]
Length = 738
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 170 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 224
>gi|355755583|gb|EHH59330.1| Mediator complex subunit 26 [Macaca fascicularis]
Length = 582
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 14 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 68
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G R E+ LD+L+ L ++ L+ILT+T IG +V L+K S D +V + A L+K WK
Sbjct: 23 GEGRNEKILDILERLDKTDVTLSILTETLIGASVAKLKKHS-DVDVSSAAAKLVKKWKSV 81
Query: 103 IRPYVWRMNLPQ 114
+ + P+
Sbjct: 82 AKASHHPASAPK 93
>gi|395521661|ref|XP_003764934.1| PREDICTED: transcription elongation factor B polypeptide 3
[Sarcophilus harrisii]
Length = 764
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L LK L L I ++IL +T +G TVN LR K ++V AK L+ WKK +
Sbjct: 6 LKHLKRLSDLPITVDILAETGVGKTVNGLR---KHEQVGGFAKDLVARWKKLV 55
>gi|426387649|ref|XP_004060276.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Gorilla gorilla gorilla]
Length = 600
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|410216636|gb|JAA05537.1| mediator complex subunit 26 [Pan troglodytes]
gi|410247824|gb|JAA11879.1| mediator complex subunit 26 [Pan troglodytes]
gi|410294560|gb|JAA25880.1| mediator complex subunit 26 [Pan troglodytes]
Length = 600
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|255647376|gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
D L+ LQ + + +++L T IG VN LRK D + LA+TLI WK+ + +V
Sbjct: 165 FDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSRD-ICQLARTLIDGWKQMVDEWV 220
>gi|55154476|gb|AAH85215.1| LOC495514 protein, partial [Xenopus laevis]
Length = 348
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 54 LKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNLP 113
LK L L I ++IL +T IG TVN+LRK + V +LAK L+ WKK + R P
Sbjct: 28 LKRLVDLPITVDILVETGIGKTVNSLRKH---EFVGDLAKNLVAQWKKLVPQETPRATEP 84
Query: 114 QD 115
++
Sbjct: 85 EE 86
>gi|296233202|ref|XP_002761911.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Callithrix jacchus]
Length = 600
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 74 MTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
M+VN LRK S D+E+I LAK+LIK+WKK +
Sbjct: 1 MSVNALRKQSSDEELIALAKSLIKSWKKLL 30
>gi|268839392|ref|NP_081761.2| mediator of RNA polymerase II transcription subunit 26 [Mus
musculus]
gi|81885976|sp|Q7TN02.1|MED26_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|32452052|gb|AAH54737.1| Mediator complex subunit 26 [Mus musculus]
gi|148678857|gb|EDL10804.1| cofactor required for Sp1 transcriptional activation, subunit 7
[Mus musculus]
Length = 588
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIEP 86
>gi|281182930|ref|NP_001100770.2| mediator complex subunit 26 [Rattus norvegicus]
Length = 588
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIEP 86
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
AL LL LQ + L +L T GM +N K S D+EV +LAK+L+K+WKK
Sbjct: 10 ALGLLTELQNV---LELLRSTGTGMLLNVSLKQSADEEVTSLAKSLVKSWKKL 59
>gi|354473953|ref|XP_003499196.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Cricetulus griseus]
Length = 563
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 10 LEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIEP 64
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 70 THIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
T IGM+VN + K S ++EV +LAK+LIK+WKK +
Sbjct: 23 TRIGMSVNAICKQSTNEEVTSLAKSLIKSWKKLL 56
>gi|62859431|ref|NP_001016996.1| mediator complex subunit 26 [Xenopus (Silurana) tropicalis]
Length = 597
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N++RK + ++E+ AK L++NW+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTSNEELAKRAKKLLRNWQKLIEPVTQNE 91
Query: 111 NL 112
L
Sbjct: 92 QL 93
>gi|149036182|gb|EDL90848.1| solute carrier family 35, member E1 (predicted) [Rattus norvegicus]
Length = 561
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 5 LEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIEP 59
>gi|432905685|ref|XP_004077466.1| PREDICTED: uncharacterized protein LOC101169481 [Oryzias latipes]
Length = 381
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L +L+ L+ L++ L IL +T IG TVN+ R+ + EV AK L+K WK +
Sbjct: 27 LKILQKLKDLDVTLEILAETGIGKTVNSFRRHKQAGEV---AKALVKGWKNLV------- 76
Query: 111 NLPQDVVKRRELGM 124
P++ +E G+
Sbjct: 77 --PKEFTSSKEDGV 88
>gi|326934588|ref|XP_003213370.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Meleagris gallopavo]
Length = 602
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N +RK + ++E+ AK L++NW+K I P
Sbjct: 21 LEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKRAKKLLRNWQKLIEPVTPNE 80
Query: 111 NLPQ 114
+P+
Sbjct: 81 AVPR 84
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+ L+ ++I L +T IG VN +RK ++ V LAK L+K WK+ + +
Sbjct: 141 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN-VRRLAKQLVKKWKETVDEW 199
Query: 107 VWRMNLPQDV 116
V + N P D+
Sbjct: 200 V-KFNQPGDL 208
>gi|380793607|gb|AFE68679.1| mediator of RNA polymerase II transcription subunit 26, partial
[Macaca mulatta]
Length = 92
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+ L+ ++I L +T IG VN +RK ++ V LAK L+K WK+ + +
Sbjct: 90 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN-VRRLAKQLVKKWKETVDEW 148
Query: 107 VWRMNLPQDV 116
V + N P D+
Sbjct: 149 V-KFNQPGDL 157
>gi|297811087|ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+ L+ ++I L +T IG VN +RK ++ V LAK L+K WK+ + +
Sbjct: 141 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN-VRRLAKQLVKKWKETVDEW 199
Query: 107 VWRMNLPQDV 116
V + N P D+
Sbjct: 200 V-KFNQPGDL 208
>gi|9758963|dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+ L+ ++I L +T IG VN +RK ++ V LAK L+K WK+ + +
Sbjct: 141 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN-VRRLAKQLVKKWKETVDEW 199
Query: 107 VWRMNLPQDV 116
V + N P D+
Sbjct: 200 V-KFNQPGDL 208
>gi|312281771|dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++LL+ L+ ++I L +T IG VN +RK ++ V LAK L+K WK+ + +
Sbjct: 136 EEALVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN-VRRLAKQLVKKWKETVDEW 194
Query: 107 VWRMNLPQDV 116
V + N P D+
Sbjct: 195 V-KFNQPGDL 203
>gi|297276409|ref|XP_002801162.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Macaca mulatta]
Length = 184
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|26350197|dbj|BAC38738.1| unnamed protein product [Mus musculus]
Length = 588
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLERYPITKEALEETRLGKLINDVRKKNKNEELAKRAKRLLRSWQKLIEP 86
>gi|355701794|gb|AES01795.1| mediator complex subunit 26 [Mustela putorius furo]
Length = 78
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 1 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 55
>gi|344241406|gb|EGV97509.1| Mediator of RNA polymerase II transcription subunit 26 [Cricetulus
griseus]
Length = 558
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 5 LEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIEP 59
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLA 92
K T GD + Q +AL++L+ L+ + IL +T +G TV LRK +++++ +LA
Sbjct: 13 KFTRGD-----VTDQVEALEVLRGLEKTTVTYAILKETKMGHTVGKLRKH-ENEKIASLA 66
Query: 93 KTLIKNWKKFI---RPYV 107
+ L+K+WK RP V
Sbjct: 67 RLLVKSWKNMALSPRPLV 84
>gi|255578426|ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical protein [Ricinus communis]
Length = 362
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+DLL++L ++I L +T IG VN LRK + +D V L K L++ WK + +V ++
Sbjct: 150 VDLLQSLADMDITFKALKETDIGRHVNQLRKHTSND-VRRLVKQLVRKWKDIVDEWV-KL 207
Query: 111 NLP 113
N P
Sbjct: 208 NPP 210
>gi|14589372|gb|AAK70627.1|AC091238_5 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430560|gb|AAP52454.1| expressed protein [Oryza sativa Japonica Group]
Length = 295
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 35 TSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKT 94
TS D+ +V DLL+ LQ + + L + I T++ LRK S ++V LA
Sbjct: 100 TSADSSEDAVV------DLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAA 153
Query: 95 LIKNWKKFIRPYVWRMN 111
L K+WK + ++ R +
Sbjct: 154 LYKSWKAIVDEHLSRSS 170
>gi|395840631|ref|XP_003793157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Otolemur garnettii]
Length = 208
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++ALQ L + +L T IG TVN +RK D EV LAK + WK FI +V
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHP-DSEVACLAKEVYTEWKTFIEKHVD 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|224058268|ref|XP_002198009.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Taeniopygia guttata]
Length = 208
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG TVN +RK D EV LA+ + + W+ FIR +
Sbjct: 58 NLMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHP-DPEVSGLARAICREWRAFIREHSN 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|125574196|gb|EAZ15480.1| hypothetical protein OsJ_30893 [Oryza sativa Japonica Group]
Length = 295
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
++ +DLL+ LQ + + L + I T++ LRK S ++V LA L K+WK + +
Sbjct: 106 EDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIVDEH 165
Query: 107 VWR 109
+ R
Sbjct: 166 LSR 168
>gi|125531305|gb|EAY77870.1| hypothetical protein OsI_32914 [Oryza sativa Indica Group]
Length = 295
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
++ +DLL+ LQ + + L + I T++ LRK S ++V LA L K+WK + +
Sbjct: 106 EDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIVDEH 165
Query: 107 VWRMN 111
+ R +
Sbjct: 166 LSRSS 170
>gi|297797271|ref|XP_002866520.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
gi|297312355|gb|EFH42779.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
Length = 1597
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
L LL+AL L ++LN L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 LILLRALDKLPVNLNALQTCNIGKSVNHLR-SHKNSEIGKKARSLVDTWKK 411
>gi|443704951|gb|ELU01735.1| hypothetical protein CAPTEDRAFT_205333, partial [Capitella teleta]
Length = 175
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+V + LD+ L+ I IL +T +G+TVNN+R+ + + ++ A+ L++ W+K +
Sbjct: 22 VVNMAEVLDVFSFLEKHTISREILEQTRMGLTVNNIRRHTSNKDLAKRARALLRAWQKLL 81
>gi|297664858|ref|XP_002810837.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2, partial [Pongo abelii]
Length = 174
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK FI +
Sbjct: 24 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREIYTEWKTFIEKH 80
>gi|426230334|ref|XP_004009229.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Ovis aries]
Length = 745
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 197 EVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 250
>gi|426222788|ref|XP_004005564.1| PREDICTED: transcription elongation factor B polypeptide 3 [Ovis
aries]
Length = 758
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q L LK L L I ++IL +T +G TVN+LRK + V N A+ L+ WKK +
Sbjct: 8 QLLKYLKKLSALPITVDILAETGVGKTVNSLRKH---EHVGNFARDLVAQWKKLV 59
>gi|338718667|ref|XP_001915032.2| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26-like [Equus caballus]
Length = 583
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 44 LVRQEQAL-DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
L+R A+ +++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K
Sbjct: 8 LIRNMVAVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKL 67
Query: 103 IRP 105
I P
Sbjct: 68 IEP 70
>gi|224060453|ref|XP_002300207.1| predicted protein [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 40 KLTGLVRQEQAL-DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+L L + E +L DLL++L ++I L +T IG VN LRK +D V L K L++
Sbjct: 134 QLEDLDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSND-VKRLVKQLVRK 192
Query: 99 WKKFIRPYVWRMN 111
WK+ + +V R+N
Sbjct: 193 WKEIVDDWV-RLN 204
>gi|355558029|gb|EHH14809.1| hypothetical protein EGK_00791, partial [Macaca mulatta]
Length = 237
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK FI +
Sbjct: 87 NLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHS-DSEVASLAREVYTEWKTFIEKHSN 145
Query: 109 RMNL 112
R ++
Sbjct: 146 RPSI 149
>gi|355745302|gb|EHH49927.1| hypothetical protein EGM_00669, partial [Macaca fascicularis]
Length = 237
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK FI +
Sbjct: 87 NLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHS-DSEVASLAREVYTEWKTFIEKH 143
>gi|432854667|ref|XP_004068014.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oryzias latipes]
Length = 555
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
++++ L+T I +L +T +G +N++RK +++ ++ AK L++NW+K I P
Sbjct: 30 IEVISFLETFPITKEVLEETRLGKLINDVRKKTRNADLAKRAKNLLRNWQKLIEP 84
>gi|156359603|ref|XP_001624856.1| predicted protein [Nematostella vectensis]
gi|156211660|gb|EDO32756.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
D+L ALQ L +L T IG T+N+LRK + D V LAK + + WK FI
Sbjct: 58 DILSALQELKAKTPSKAVLLSTQIGHTINSLRKHTCQD-VCQLAKEIFRKWKHFI 111
>gi|17065422|gb|AAL32865.1| Unknown protein [Arabidopsis thaliana]
gi|20148541|gb|AAM10161.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 59 TLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+LN+D IL T IG VN LRK S D++ LAKTLI WK+ + +V
Sbjct: 2 SLNVD--ILKSTEIGKAVNGLRKHS-SDKIRQLAKTLIAEWKELVDQWV 47
>gi|440901296|gb|ELR52270.1| Mediator of RNA polymerase II transcription subunit 26, partial
[Bos grunniens mutus]
Length = 572
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 32 EVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 85
>gi|149642737|ref|NP_001092358.1| mediator of RNA polymerase II transcription subunit 26 [Bos taurus]
gi|158705955|sp|A5PK23.1|MED26_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|148744068|gb|AAI42326.1| MED26 protein [Bos taurus]
gi|296486050|tpg|DAA28163.1| TPA: mediator of RNA polymerase II transcription subunit 26 [Bos
taurus]
Length = 599
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 33 EVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|388490268|ref|NP_001253782.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|380809580|gb|AFE76665.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|383415793|gb|AFH31110.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
Length = 208
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK FI +
Sbjct: 58 NLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHS-DSEVASLAREVYTEWKTFIEKH 114
>gi|402854650|ref|XP_003891976.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein 2
[Papio anubis]
Length = 208
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK FI +
Sbjct: 58 NLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHS-DSEVASLAREVYTEWKTFIEKH 114
>gi|326672761|ref|XP_002664127.2| PREDICTED: transcription elongation factor B polypeptide 3-like
[Danio rerio]
Length = 587
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +L L+ L+I L IL +T IG VN+ RK DE +AK L+ WK +
Sbjct: 26 LKILNKLEVLDITLEILAETGIGKVVNSFRKH---DEAGKVAKVLVNRWKALV 75
>gi|355557663|gb|EHH14443.1| hypothetical protein EGK_00370, partial [Macaca mulatta]
gi|355745018|gb|EHH49643.1| hypothetical protein EGM_00341, partial [Macaca fascicularis]
Length = 750
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q L LK L TL I ++IL +T +G TVN+LRK + V + A+ L+ WKK +
Sbjct: 1 QLLKYLKKLSTLPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLV 52
>gi|350580383|ref|XP_003480809.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Sus scrofa]
Length = 599
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+++ +L+ I L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 33 EVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
E+ D+L +L + + L +L ++ +G TV+ L+K + D+EV AK L+K WK+
Sbjct: 24 ERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHA-DEEVSKSAKALVKKWKRV 77
>gi|327285776|ref|XP_003227608.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Anolis carolinensis]
Length = 767
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
++L+G ++ + LK L L I ++IL +T +G TVN LRK ++V + AK L+
Sbjct: 14 SRLSGGAEPKKLMKNLKRLSELPITVDILLETGVGKTVNGLRKH---EQVGDFAKNLVAR 70
Query: 99 WKKFI 103
WKK +
Sbjct: 71 WKKLV 75
>gi|443708541|gb|ELU03618.1| hypothetical protein CAPTEDRAFT_186172 [Capitella teleta]
Length = 595
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+V + LD+ L+ I IL +T +G+TVNN+R+ + + ++ A+ L++ W+K +
Sbjct: 22 VVNMAEVLDVFSFLERHTISREILEQTRMGLTVNNIRRQTSNKDLAKRARALLRAWQKLL 81
>gi|296208027|ref|XP_002750904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Callithrix jacchus]
Length = 208
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN LRK S D EV LA+ + WK FI +
Sbjct: 58 NLVEALQELKKKIPSREVLKSTKIGHTVNKLRKHS-DSEVAYLAREVYTEWKTFIEKH 114
>gi|348550467|ref|XP_003461053.1| PREDICTED: serine/threonine-protein phosphatase 1 regulatory
subunit 10-like isoform 1 [Cavia porcellus]
Length = 882
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNL 112
+L LQ L + ++ L + + V L KSS+D+E+ LA L+ +W IR
Sbjct: 94 ILVTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSSAQPA 153
Query: 113 PQDVVKRRELGMS 125
+D KRRE G S
Sbjct: 154 EKDRKKRREEGKS 166
>gi|348550471|ref|XP_003461055.1| PREDICTED: serine/threonine-protein phosphatase 1 regulatory
subunit 10-like isoform 3 [Cavia porcellus]
Length = 893
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNL 112
+L LQ L + ++ L + + V L KSS+D+E+ LA L+ +W IR
Sbjct: 94 ILVTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSSAQPA 153
Query: 113 PQDVVKRRELGMS 125
+D KRRE G S
Sbjct: 154 EKDRKKRREEGKS 166
>gi|224178736|ref|XP_002197961.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Taeniopygia guttata]
Length = 155
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++AL+ L + +L T IG TVN +RK D EV LA+ + + W+ FIR +
Sbjct: 36 NLMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHP-DPEVSGLARAICREWRAFIREH 92
>gi|348550469|ref|XP_003461054.1| PREDICTED: serine/threonine-protein phosphatase 1 regulatory
subunit 10-like isoform 2 [Cavia porcellus]
Length = 877
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNL 112
+L LQ L + ++ L + + V L KSS+D+E+ LA L+ +W IR
Sbjct: 94 ILVTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSSAQPA 153
Query: 113 PQDVVKRRELGMS 125
+D KRRE G S
Sbjct: 154 EKDRKKRREEGKS 166
>gi|165970440|gb|AAI58269.1| LOC100144956 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 54 LKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
LK L L I ++IL +T IG TVN LRK + V +LAK L+ WKK +
Sbjct: 29 LKRLGDLPITVDILVETGIGKTVNGLRKH---EFVGDLAKNLVAQWKKLV 75
>gi|403258011|ref|XP_003921579.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Saimiri boliviensis
boliviensis]
Length = 208
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++ALQ L + +L T IG TVN LRK S D EV LA+ + WK FI +
Sbjct: 58 NLVEALQELKKKIPSREVLKSTKIGHTVNKLRKHS-DSEVAYLAREVYTEWKTFIEKH 114
>gi|444706269|gb|ELW47612.1| Transcription elongation factor B polypeptide 3, partial [Tupaia
chinensis]
Length = 783
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
Q L LK L L I ++IL +T +G TVN+LRK + V + A+ L+ WKK + V
Sbjct: 1 QLLKYLKKLSALPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLVP--VE 55
Query: 109 RMNLP--QDVVKRRE 121
R P QD+ K+ E
Sbjct: 56 RNTEPDEQDLEKKNE 70
>gi|348664652|gb|EGZ04496.1| hypothetical protein PHYSODRAFT_536259 [Phytophthora sojae]
Length = 459
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVI-NLAKTLIKNW 99
LL L TL +D ++LT+T IG VN L+K DDEV+ + +L K W
Sbjct: 38 LLGRLTTLTVDRDLLTRTKIGAAVNKLKK--HDDEVVRGYSTSLTKKW 83
>gi|301608648|ref|XP_002933890.1| PREDICTED: transcription elongation factor B polypeptide 3 [Xenopus
(Silurana) tropicalis]
Length = 706
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 54 LKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
LK L L I ++IL +T IG TVN LRK + V +LAK L+ WKK +
Sbjct: 29 LKRLGDLPITVDILVETGIGKTVNGLRKH---EFVGDLAKNLVAQWKKLV 75
>gi|291411771|ref|XP_002722140.1| PREDICTED: mediator complex subunit 26 [Oryctolagus cuniculus]
Length = 599
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK + ++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTTNEELAKRAKKLLRSWQKLIEP 86
>gi|371591277|gb|AEX55000.1| Crspy/Crsp7/Med26 protein [Ornithorhynchus anatinus]
Length = 599
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L+++ +L+ I L +T +G +N++RK ++++E+ AK L+++W+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTRNEELAKRAKKLLRSWQKLIEP 86
>gi|148237978|ref|NP_001083898.1| mediator of RNA polymerase II transcription subunit 26 [Xenopus
laevis]
gi|82177417|sp|Q90YY5.1|MED26_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|15077843|gb|AAK83376.1|AF395742_1 CRSP70-like protein [Xenopus laevis]
gi|50417434|gb|AAH77251.1| Crsp7 protein [Xenopus laevis]
Length = 597
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+++ +L+ I L +T +G +N++RK + ++++ AK L++NW+K I P
Sbjct: 32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTSNEDLAKRAKKLLRNWQKLIEPVTQNE 91
Query: 111 NL 112
L
Sbjct: 92 QL 93
>gi|291221136|ref|XP_002730579.1| PREDICTED: chromosome 1 open reading frame 83-like [Saccoglossus
kowalevskii]
Length = 210
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 52 DLLKALQTL---NIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
+LLKALQ L IL+ T IG T+N +RK S EV LAK + +WKKFI+
Sbjct: 60 NLLKALQELRQKTPSREILSSTKIGHTLNTIRKHS-SKEVAALAKDIRNDWKKFIK 114
>gi|357509279|ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + +++L T IG VN+LRK D + LA+TLI WK+ + +V
Sbjct: 155 FESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKD-IRQLARTLIDGWKELVNAWV 210
>gi|47210148|emb|CAF95030.1| unnamed protein product [Tetraodon nigroviridis]
Length = 524
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
++++ L+ I L +T +G +N++RK +K++++ AK L++NW+K I P
Sbjct: 32 MEVISFLEKYPITREALEETRLGKLINDVRKKTKNEDLARRAKKLLRNWQKLIEP 86
>gi|427788075|gb|JAA59489.1| Putative transcription elongation factor b polypeptide
[Rhipicephalus pulchellus]
Length = 577
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E+ L+ L+ LQ + + LN+L T IG TVN+L+K++ + LA+ +I +WK+ +
Sbjct: 22 EKVLETLRKLQKVPMTLNLLQDTGIGRTVNHLKKNT--GVIGELARAIISSWKQVV 75
>gi|388520529|gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + +++L T IG VN+LRK D + LA+TLI WK+ + +V
Sbjct: 155 FESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKD-IRQLARTLIDGWKELVNAWV 210
>gi|357509283|ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + +++L T IG VN+LRK D + LA+TLI WK+ + +V
Sbjct: 152 FESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKD-IRQLARTLIDGWKELVNAWV 207
>gi|357509285|ref|XP_003624931.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499946|gb|AES81149.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 302
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + +++L T IG VN+LRK D + LA+TLI WK+ + +V
Sbjct: 10 FESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKD-IRQLARTLIDGWKELVNAWV 65
>gi|357509281|ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499944|gb|AES81147.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 467
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + +++L T IG VN+LRK D + LA+TLI WK+ + +V
Sbjct: 155 FESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKD-IRQLARTLIDGWKELVNAWV 210
>gi|326495800|dbj|BAJ85996.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509413|dbj|BAJ91623.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518852|dbj|BAJ92587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
D L+ LQ + + ++ L T IG VN LRK S ++ +L +TLI +WK + +V
Sbjct: 210 FDSLRRLQLMQLSVSTLKATEIGRAVNGLRKHSSQ-QIRHLVQTLIDDWKILVDEWVSTT 268
Query: 111 NL 112
N+
Sbjct: 269 NV 270
>gi|224126771|ref|XP_002329469.1| predicted protein [Populus trichocarpa]
gi|222870149|gb|EEF07280.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
++ +DLL++L ++I L +T IG VN LRK +D V L K L++ WK+ + +
Sbjct: 142 EDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSND-VRRLVKQLVRKWKEIVDDW 200
Query: 107 VWRMNLPQ 114
V R+N PQ
Sbjct: 201 V-RLN-PQ 206
>gi|296088637|emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 20/93 (21%)
Query: 34 RTSGDNKLTGLVRQEQA-------------------LDLLKALQTLNIDLNILTKTHIGM 74
R+ +++ GL+ +E+A +DLL+ L ++I L +T IG
Sbjct: 93 RSGSEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGR 152
Query: 75 TVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
VN LRK +D V L K L++ WK + +V
Sbjct: 153 HVNRLRKHPSND-VRRLVKHLVRKWKDLVDEWV 184
>gi|359476965|ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 20/93 (21%)
Query: 34 RTSGDNKLTGLVRQEQA-------------------LDLLKALQTLNIDLNILTKTHIGM 74
R+ +++ GL+ +E+A +DLL+ L ++I L +T IG
Sbjct: 93 RSGSEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGR 152
Query: 75 TVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
VN LRK +D V L K L++ WK + +V
Sbjct: 153 HVNRLRKHPSND-VRRLVKHLVRKWKDLVDEWV 184
>gi|225431398|ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 20/93 (21%)
Query: 34 RTSGDNKLTGLVRQEQA-------------------LDLLKALQTLNIDLNILTKTHIGM 74
R+ +++ GL+ +E+A +DLL+ L ++I L +T IG
Sbjct: 93 RSGSEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGR 152
Query: 75 TVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
VN LRK +D V L K L++ WK + +V
Sbjct: 153 HVNRLRKHPSND-VRRLVKHLVRKWKDLVDEWV 184
>gi|156400961|ref|XP_001639060.1| predicted protein [Nematostella vectensis]
gi|156226186|gb|EDO46997.1| predicted protein [Nematostella vectensis]
Length = 727
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L +K L+ L +D+++L +T IG T+N L+K + + + A LIK WK+ +
Sbjct: 26 LKYIKYLEQLEVDVDVLKRTGIGKTINGLKKM--EGPIGDAAANLIKRWKEIV 76
>gi|356571901|ref|XP_003554109.1| PREDICTED: uncharacterized protein LOC100799367 [Glycine max]
Length = 458
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
D L+ LQ + + ++ L T IG VN LRK D + L++TLI WK+ + +V
Sbjct: 163 FDSLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKD-IRQLSRTLIDGWKEMVDEWV 218
>gi|147768575|emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
Length = 333
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 20/93 (21%)
Query: 34 RTSGDNKLTGLVRQEQA-------------------LDLLKALQTLNIDLNILTKTHIGM 74
R+ +++ GL +E+A +DLL+ L ++I L +T IG
Sbjct: 93 RSGSEDRCGGLPDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGR 152
Query: 75 TVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
VN LRK +D V L K L++ WK + +V
Sbjct: 153 HVNRLRKHPSND-VRRLVKHLVRKWKDLVDEWV 184
>gi|410921800|ref|XP_003974371.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Takifugu rubripes]
Length = 529
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
++++ L+ I L +T +G +N++RK +K++++ AK L++NW+K I P
Sbjct: 32 MEVISFLEKYPITKEALEETRLGKLINDVRKKTKNEDLARRAKKLLRNWQKLIEP 86
>gi|296490042|tpg|DAA32155.1| TPA: elongin A [Bos taurus]
Length = 265
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNLPQD 115
I ++IL +T +G TVN+LRK + V N A+ L+ WKK + V R P++
Sbjct: 38 ITVDILAETGVGKTVNSLRKH---EHVGNFARDLVAQWKKLV--PVERTTEPEE 86
>gi|348523209|ref|XP_003449116.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oreochromis niloticus]
Length = 574
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
++++ L+ I L +T +G +N++RK +K++++ AK L++NW+K I P
Sbjct: 32 VEVISFLEKYPITKEALEETRLGKLINDVRKKTKNEDLAKRAKKLLRNWQKLIEP 86
>gi|344278662|ref|XP_003411112.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Loxodonta africana]
Length = 208
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++ALQ L + +L T IG TVN +RK S D EV LA+ + W+ F+ ++
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVACLAREVYTEWRTFMEKHLH 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|198422698|ref|XP_002131480.1| PREDICTED: similar to Arc70 [Ciona intestinalis]
Length = 334
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 39 NKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
NK + Q+ AL+++ L+T I L +T +G +N++R+++ D + AK LIK
Sbjct: 17 NKDGTISDQDVALEIIAMLETTVISCEELEETRLGKYINDVRRAATDTSIQRRAKKLIKT 76
Query: 99 WKKFIR 104
W++ I+
Sbjct: 77 WQQMIQ 82
>gi|359493121|ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 26 SAMLTKKKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKD 85
S +L K+R ++L ++ +DLL++L ++I L +T IG VN LRK
Sbjct: 104 SKILAIKERLEDPDQL-----EDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPS- 157
Query: 86 DEVINLAKTLIKNWKKFIRPYV 107
+EV L K L++ WK + +V
Sbjct: 158 NEVRRLVKQLVRKWKDLVDEWV 179
>gi|291398844|ref|XP_002716014.1| PREDICTED: chromosome 1 open reading frame 83-like [Oryctolagus
cuniculus]
Length = 208
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++ALQ L + +L T IG TVN +RK S D EV LA + WK FI ++
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVACLAGEVYTEWKTFIEKHLD 116
Query: 109 R 109
R
Sbjct: 117 R 117
>gi|449268226|gb|EMC79096.1| hypothetical protein A306_13529, partial [Columba livia]
Length = 175
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++AL+ L + +L T IG TVN +RK S D +V +LAK + W+ FIR +
Sbjct: 25 NLIEALEELKKKIPSKEVLLSTKIGHTVNKMRKHS-DHDVASLAKDIYTEWRTFIRDH 81
>gi|110288880|gb|ABG66008.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 417
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 37 GDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLI 96
G N + E ++LL+ALQ + + L + IG ++ LRK S ++V +LA L
Sbjct: 94 GGNPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSS-EQVRDLAAALY 152
Query: 97 KNWKKFIRPYVWR 109
K+WK + ++ R
Sbjct: 153 KSWKALVDEHLTR 165
>gi|413916108|gb|AFW56040.1| hypothetical protein ZEAMMB73_150497 [Zea mays]
Length = 327
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 37 GDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLI 96
G++ + L+R++QA+D+ +L T IG TV+ LRKS+ LA TL
Sbjct: 66 GNDAVVELIREQQAVDMT---------YEVLEATKIGHTVSALRKSAPTALAHLLADTLY 116
Query: 97 KNWKKFIRPYVWRM 110
+ WK+ +P R+
Sbjct: 117 RQWKETGKPDWCRL 130
>gi|325192517|emb|CCA26950.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 553
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
A+ +LK L + +++ +L T +G ++ L+K KD EV LA+ LIK WK+
Sbjct: 500 AIHVLKKLSGMTLNVEVLKSTGVGRIISKLKKH-KDGEVSRLAQILIKKWKR 550
>gi|440904860|gb|ELR55318.1| hypothetical protein M91_07816, partial [Bos grunniens mutus]
Length = 232
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+KAL+ L + +L T IG TVN +R+ S D EV LA+ + W+ FI +V
Sbjct: 82 NLVKALRELKKKIPSREVLKSTKIGHTVNKMRQHS-DSEVACLAREVYTEWRTFIEKHVN 140
Query: 109 RMNL 112
R ++
Sbjct: 141 RPSI 144
>gi|47087443|ref|NP_998620.1| transcription elongation factor B polypeptide 3 [Danio rerio]
gi|27881892|gb|AAH44429.1| Zgc:55573 [Danio rerio]
Length = 622
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L LK L L + ++IL +T IG TVN+LRK E AK L+ WKK +
Sbjct: 26 LKTLKRLGELPMTVDILVETGIGKTVNSLRKHEYAGEA---AKNLVAKWKKLV 75
>gi|395536767|ref|XP_003770383.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Sarcophilus harrisii]
Length = 208
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
QE ++ L+ L+ ++L T IG TVN +RK S D EV LA + WK FI
Sbjct: 56 QENLMEALRELKKKLPSKDVLKSTKIGHTVNKMRKHS-DGEVARLAHEVYTEWKTFI 111
>gi|397487966|ref|XP_003815047.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Pan paniscus]
Length = 208
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK F
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>gi|114556722|ref|XP_001150996.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 isoform 3 [Pan troglodytes]
gi|426329745|ref|XP_004025895.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Gorilla gorilla gorilla]
gi|410210050|gb|JAA02244.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410265674|gb|JAA20803.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410296030|gb|JAA26615.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410352709|gb|JAA42958.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
Length = 208
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK F
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>gi|356504664|ref|XP_003521115.1| PREDICTED: uncharacterized protein LOC100817835 [Glycine max]
Length = 452
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + ++ L T IG VN LRK D + LA+TLI WK+ + +V
Sbjct: 159 FESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKD-IRQLARTLINGWKEMVDEWV 214
>gi|12848458|dbj|BAB27962.1| unnamed protein product [Mus musculus]
Length = 228
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+ ALQ L + +L T IG VN +R+ S D EV LAK + WK FI ++
Sbjct: 57 NLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHS-DPEVAGLAKEVYTEWKTFIEKHLD 115
Query: 109 RMNL 112
R ++
Sbjct: 116 RPSI 119
>gi|23308505|ref|NP_694580.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Homo sapiens]
gi|74752040|sp|Q96MN5.1|TEAN2_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|16552144|dbj|BAB71250.1| unnamed protein product [Homo sapiens]
gi|23271582|gb|AAH35374.1| Chromosome 1 open reading frame 83 [Homo sapiens]
gi|119627108|gb|EAX06703.1| chromosome 1 open reading frame 83 [Homo sapiens]
gi|167773393|gb|ABZ92131.1| chromosome 1 open reading frame 83 [synthetic construct]
Length = 208
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
+L++ALQ L + +L T IG TVN +RK S D EV +LA+ + WK F
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>gi|327291880|ref|XP_003230648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like, partial [Anolis carolinensis]
Length = 538
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 69 KTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+T +G +N++RK ++++E+ AK L++NW+K I P
Sbjct: 1 ETRLGRLINDVRKKTENEELAKRAKKLLRNWQKLIEP 37
>gi|359491606|ref|XP_003634295.1| PREDICTED: uncharacterized protein LOC100248456 [Vitis vinifera]
Length = 1631
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 353 EEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLR-SHKNLEIQKKARSLVDTWKK 406
>gi|147817646|emb|CAN60153.1| hypothetical protein VITISV_021504 [Vitis vinifera]
Length = 1688
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 397 EEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLR-SHKNLEIQKKARSLVDTWKK 450
>gi|126343388|ref|XP_001364305.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Monodelphis domestica]
Length = 208
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
QE L+ L+ L+ ++L T IG TVN +RK S D EV +LA + W+ FI +
Sbjct: 56 QENLLEALRELKKKLPSKDVLKSTRIGHTVNKMRKHS-DGEVASLANEVYTEWRTFIEKH 114
>gi|255540759|ref|XP_002511444.1| conserved hypothetical protein [Ricinus communis]
gi|223550559|gb|EEF52046.1| conserved hypothetical protein [Ricinus communis]
Length = 1651
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L+ L +IG +VN+LR + K E+ A+TL+ WKK
Sbjct: 365 EEFLLVLLRALDKLPVNLHALQMCNIGKSVNHLR-THKHLEIQKKARTLVDTWKK 418
>gi|393910604|gb|EJD75959.1| hypothetical protein LOAG_16992 [Loa loa]
Length = 459
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRK--SSKDDEVINLAKTLIKNWKKFIRP 105
EQA D++ L+ N+ +L T +G VN++RK + E+ +TLIK W+K P
Sbjct: 11 EQATDVIIKLEKSNLTKELLEMTRVGAVVNDIRKKVAQSAPELSKRCRTLIKCWQKLAEP 70
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 43 GLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKF 102
G+ +++ + LL L + + I+ +T IG+ VN +RK D+ + K +IK WK
Sbjct: 21 GMGSKDECIKLLDDLAKFQMTVEIIQQTSIGIKVNMMRKKVPDESLAKRTKNIIKEWKNI 80
Query: 103 I 103
+
Sbjct: 81 V 81
>gi|326933172|ref|XP_003212682.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Meleagris gallopavo]
Length = 763
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
Q L LK L L I ++IL +T +G TVN+LRK + V + AK L+ WKK +
Sbjct: 8 QLLKSLKRLSELPITVDILVETGVGKTVNSLRKH---ELVGDFAKNLVARWKKLV 59
>gi|335291450|ref|XP_003356504.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Sus scrofa]
Length = 208
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E +++L+ L+ +L T IG TVN +R+ S D EV LA+ + W+ FI +
Sbjct: 56 KENLVEVLRELKKKIPSREVLKSTRIGHTVNKMRQHS-DSEVACLAREVYTEWRTFIEEH 114
Query: 107 VWRMNL 112
V R ++
Sbjct: 115 VDRPSI 120
>gi|297704002|ref|XP_002828911.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Pongo abelii]
Length = 600
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 67 LTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
L +T +G +N++RK +K++E+ AK L+++W+K I P
Sbjct: 48 LEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIEP 86
>gi|356507216|ref|XP_003522365.1| PREDICTED: uncharacterized protein LOC100780436 [Glycine max]
Length = 1701
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR + K+ E+ A+ L+ WKK
Sbjct: 443 EEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLR-THKNTEIQRKARGLVDTWKK 496
>gi|13385072|ref|NP_079893.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Mus musculus]
gi|147742987|sp|Q8R2M0.2|TEAN2_MOUSE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|12843080|dbj|BAB25851.1| unnamed protein product [Mus musculus]
gi|148698840|gb|EDL30787.1| RIKEN cDNA 2210012G02, isoform CRA_a [Mus musculus]
Length = 207
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+ ALQ L + +L T IG VN +R+ S D EV LAK + WK FI ++
Sbjct: 57 NLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHS-DPEVAGLAKEVYTEWKTFIEKHLD 115
Query: 109 RMNL 112
R ++
Sbjct: 116 RPSI 119
>gi|20271478|gb|AAH28321.1| RIKEN cDNA 2210012G02 gene [Mus musculus]
Length = 207
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+ ALQ L + +L T IG VN +R+ S D EV LAK + WK FI ++
Sbjct: 57 NLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHS-DPEVAGLAKEVYTEWKTFIEKHLD 115
Query: 109 RMNL 112
R ++
Sbjct: 116 RPSI 119
>gi|413916115|gb|AFW56047.1| hypothetical protein ZEAMMB73_697365 [Zea mays]
Length = 1067
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 25 GSAMLTKKKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSK 84
GS +L R D +L + ++L++ LQ +++ +L T IG TVN LRKS+
Sbjct: 8 GSDVLATVARI--DRRLAREKDNDVVVELIRELQAVDMTYEVLEATKIGHTVNALRKSAP 65
Query: 85 DDEVINLAKTLIKNWK 100
LA TL + WK
Sbjct: 66 TALARLLADTLYRQWK 81
>gi|308322525|gb|ADO28400.1| uncharacterized protein c1orf83 [Ictalurus furcatus]
Length = 211
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 65 NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+L T IG TVN LRK D EV +LA+ + W+ FI
Sbjct: 74 EVLKSTRIGHTVNTLRKEHPDAEVKSLARQVYTRWRTFI 112
>gi|156121311|ref|NP_001095803.1| transcription elongation factor B polypeptide 3 [Bos taurus]
gi|151554223|gb|AAI49491.1| TCEB3 protein [Bos taurus]
Length = 264
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
I ++IL +T +G TVN+LR K + V N A+ L+ WKK +
Sbjct: 38 ITVDILAETGVGKTVNSLR---KHEHVGNFARDLVAQWKKLV 76
>gi|242084758|ref|XP_002442804.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
gi|241943497|gb|EES16642.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
Length = 371
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
++ L+ LQ +++ L T IG VN LRKS+ ++ LA L WK
Sbjct: 33 VESLRELQDVHMTFEALEATKIGRAVNTLRKSAASEQARRLAAALYTGWK 82
>gi|356518993|ref|XP_003528159.1| PREDICTED: uncharacterized protein LOC100788512 [Glycine max]
Length = 1613
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR + K+ E+ A+ L+ WKK
Sbjct: 359 EEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLR-THKNTEIQRKARGLVDTWKK 412
>gi|449526349|ref|XP_004170176.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101224819 [Cucumis sativus]
Length = 1599
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 355 EEFLLVLLRALDKLPVNLPALQMCNIGKSVNHLR-SHKNLEIQKKARSLVDTWKK 408
>gi|449441029|ref|XP_004138286.1| PREDICTED: uncharacterized protein LOC101210258 [Cucumis sativus]
Length = 1606
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 EEFLLVLLRALDKLPVNLPALQMCNIGKSVNHLR-SHKNLEIQKKARSLVDTWKK 415
>gi|302797152|ref|XP_002980337.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
gi|300151953|gb|EFJ18597.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
Length = 377
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
L+LL L LN+ + L T IG VNNLR+ D++ + A+ LI++WK
Sbjct: 130 LELLVRLTDLNLSIETLKATEIGKPVNNLRRHGC-DQIKSAARKLIRSWK 178
>gi|302759146|ref|XP_002962996.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
gi|300169857|gb|EFJ36459.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
Length = 377
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
L+LL L LN+ + L T IG VNNLR+ D++ + A+ LI++WK
Sbjct: 130 LELLVRLTDLNLSIETLKATEIGKPVNNLRRHGC-DQIKSAARKLIRSWK 178
>gi|296489088|tpg|DAA31201.1| TPA: hypothetical protein LOC539385 [Bos taurus]
Length = 208
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG TVN +R+ S D EV LA+ + W+ FI +V
Sbjct: 58 NLVEALRELKKKIPSREVLKSTKIGHTVNKMRQHS-DSEVACLAREVYTEWRTFIEKHVN 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|157279893|ref|NP_001098462.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Bos taurus]
gi|325530293|sp|A5PKE4.1|TEAN2_BOVIN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|148744002|gb|AAI42458.1| LOC539385 protein [Bos taurus]
Length = 208
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG TVN +R+ S D EV LA+ + W+ FI +V
Sbjct: 58 NLVEALRELKKKIPSREVLKSTKIGHTVNKMRQHS-DSEVACLAREVYTEWRTFIEKHVN 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRK---SSKDDEVINLAKTLIKNWK 100
A+DLL AL+ I +L + IG VN LRK +S E+ +K+LIK WK
Sbjct: 25 AVDLLNALKEEKITKELLESSKIGHVVNALRKGAQTSGHAEIAAQSKSLIKQWK 78
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRK---SSKDDEVINLAKTLIKNWK 100
A+DLL AL+ I +L + IG VN LRK +S E+ +K+LIK WK
Sbjct: 25 AVDLLNALKEEKITKELLESSKIGHVVNALRKGAQTSGHAEIAAQSKSLIKQWK 78
>gi|297819422|ref|XP_002877594.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
gi|297323432|gb|EFH53853.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
Length = 1613
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 55 KALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+AL L ++LN L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLR-SHKNSEIGKKARSLVDTWKK 407
>gi|15228325|ref|NP_190389.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|4678322|emb|CAB41133.1| putative protein [Arabidopsis thaliana]
gi|332644841|gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1611
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 55 KALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+AL L ++LN L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLR-SHKNSEIGKKARSLVDTWKK 407
>gi|4678323|emb|CAB41134.1| putative protein [Arabidopsis thaliana]
Length = 1613
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 55 KALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+AL L ++LN L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLR-SHKNSEIGKKARSLVDTWKK 407
>gi|186510768|ref|NP_190388.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|186510770|ref|NP_850669.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644839|gb|AEE78360.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644840|gb|AEE78361.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1613
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 55 KALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+AL L ++LN L +IG +VN+LR S K+ E+ A++L+ WKK
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLR-SHKNSEIGKKARSLVDTWKK 407
>gi|343172619|gb|AEL99013.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+DLL+ L ++I L +T IG VN LRK +D V L K L++ WK + +V
Sbjct: 76 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSND-VRQLVKLLVRKWKDLVDEWV 131
>gi|332021087|gb|EGI61474.1| Mediator of RNA polymerase II transcription subunit 26 [Acromyrmex
echinatior]
Length = 567
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 16 TRRPKRNLIGSAMLTKKKRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMT 75
T RP +G+ + +RT + G+V +D++ L+ + L T +G
Sbjct: 3 TPRPSNPPVGAPL----RRTVEQRQAHGVVDIRAVVDVISTLEKTTVTKEALEITRLGKH 58
Query: 76 VNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+N LR+ + ++ + AK L++ W+ + P V
Sbjct: 59 INELRRKTSNEALAKRAKDLVRRWRDMVLPTVH 91
>gi|343172617|gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+DLL+ L ++I L +T IG VN LRK +D V L K L++ WK + +V
Sbjct: 76 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSND-VRQLVKLLVRKWKDLVDEWV 131
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
E+ LD+L+ L IDL ILT+T IG +V+ L+ S D + A+ L+K WK +
Sbjct: 106 EKILDILQRLDKEKIDLAILTETLIGASVSKLKAHS-DTNISISARGLVKKWKNIAK 161
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
L L+ L+ ++I + L +T IG VN LRK V +LAK L+++WK + +V
Sbjct: 515 LTALRTLEDMHISVEALKQTEIGKEVNALRKHPSK-RVRSLAKDLVRSWKDLVDEWV 570
>gi|332247941|ref|XP_003273122.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Nomascus leucogenys]
Length = 208
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+L++ALQ L + +L T IG TVN + K S D EV +LA+ + WK FI
Sbjct: 58 NLVEALQELKKKIPSREVLKSTRIGHTVNKMCKHS-DSEVASLAREVYTEWKTFI 111
>gi|255076087|ref|XP_002501718.1| predicted protein [Micromonas sp. RCC299]
gi|226516982|gb|ACO62976.1| predicted protein [Micromonas sp. RCC299]
Length = 139
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+E+ L L+ L ++ + ++LT + IG V+ LR+ D+EV LA ++ WK
Sbjct: 50 KEEFLTALRHLSSMLMTRDLLTSSMIGKVVSRLRRKHPDEEVRKLAGAMVDKWK 103
>gi|440897840|gb|ELR49450.1| Transcription elongation factor B polypeptide 3, partial [Bos
grunniens mutus]
Length = 750
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L LK L L I ++IL +T +G TVN+LRK + V + A+ L+ WKK +
Sbjct: 1 LKYLKKLSALPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLV 50
>gi|113205156|gb|AAX95757.2| BAH domain-containing protein, putative [Solanum lycopersicum]
Length = 1631
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR+ K+ E+ A++L+ WKK
Sbjct: 357 EEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQ-HKNMEIQRKARSLVDTWKK 410
>gi|62183957|gb|AAX73298.1| putative BAH domain-containing protein [Solanum lycopersicum]
Length = 1608
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
+E L LL+AL L ++L L +IG +VN+LR+ K+ E+ A++L+ WKK
Sbjct: 334 EEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQ-HKNMEIQRKARSLVDTWKK 387
>gi|413916104|gb|AFW56036.1| hypothetical protein ZEAMMB73_101493 [Zea mays]
Length = 345
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+DL++ LQ + + L T IG TVN LRK++ LA TL + WK + W
Sbjct: 42 VDLIRELQAVPMTYEALEATMIGRTVNGLRKTAPSALARLLADTLYRQWKALA--HEWHA 99
Query: 111 N 111
+
Sbjct: 100 S 100
>gi|413916112|gb|AFW56044.1| hypothetical protein ZEAMMB73_677944 [Zea mays]
Length = 342
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+DL++ L+ L + L T IG TVN LRK++ LA TL + WK + W
Sbjct: 42 VDLIRELEALPMTYEALEATMIGRTVNGLRKTAPSALARLLADTLYRQWKALA--HEWHA 99
Query: 111 N 111
+
Sbjct: 100 S 100
>gi|357627246|gb|EHJ76990.1| hypothetical protein KGM_12362 [Danaus plexippus]
Length = 638
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRP 105
+++ L+ NI +L T +G VN LR+ + + + AK L+K W+ + P
Sbjct: 6 EIISILEKFNITKELLETTRLGKHVNELRRKTSEPTLARRAKVLVKRWRDLVIP 59
>gi|260792918|ref|XP_002591461.1| hypothetical protein BRAFLDRAFT_119264 [Branchiostoma floridae]
gi|229276666|gb|EEN47472.1| hypothetical protein BRAFLDRAFT_119264 [Branchiostoma floridae]
Length = 210
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 53 LLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
LL+AL LN + +L T IG VN L K +D EV +LA++++ WK FI+
Sbjct: 59 LLEALTELNKKIPSKQVLLSTKIGHAVNKL-KRHEDKEVASLARSIVLKWKHFIQ 112
>gi|195133956|ref|XP_002011404.1| GI14059 [Drosophila mojavensis]
gi|193912027|gb|EDW10894.1| GI14059 [Drosophila mojavensis]
Length = 1424
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+V E L ++ AL+ I L T + +N LR+ +K+D++ AK+L+K W++ +
Sbjct: 23 VVNMEAVLSVICALEGTTITKEQLEATRLAKYINQLRRRTKNDQLARRAKSLLKKWREMV 82
>gi|242007186|ref|XP_002424423.1| transcription elongation factor B polypeptide, putative [Pediculus
humanus corporis]
gi|212507823|gb|EEB11685.1| transcription elongation factor B polypeptide, putative [Pediculus
humanus corporis]
Length = 639
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 22 NLIGSAMLTKKKRTS--GDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNL 79
N I SA+L K+ D L +++ L + L L +++N L +T +G TVN+L
Sbjct: 4 NDIVSAILHYKRNIDKISDPPERALKYEDRLLHCINKLYKLPVNVNHLQETGVGRTVNSL 63
Query: 80 RKSSKDDEVINLAKTLIKNWKKFI 103
RK + + + AK L+ WK +
Sbjct: 64 RKIEGEKGLGDAAKALVAKWKTMV 87
>gi|255540753|ref|XP_002511441.1| DNA binding protein, putative [Ricinus communis]
gi|223550556|gb|EEF52043.1| DNA binding protein, putative [Ricinus communis]
Length = 1712
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
LL+AL L ++L+ L +IG +VN+LR + K+ E+ A++L+ WKK
Sbjct: 451 LLRALDKLPVNLHALQMCNIGKSVNHLR-THKNLEIQKKARSLVDTWKK 498
>gi|302794781|ref|XP_002979154.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
gi|302813676|ref|XP_002988523.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300143630|gb|EFJ10319.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300152922|gb|EFJ19562.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
Length = 384
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E+ L ++ L+ L I + L T IGM VN LRK K V K L+K WK +
Sbjct: 127 EKLLKPIERLEQLQISVQALKVTGIGMIVNKLRKHHKSSRVKAGCKKLVKLWKDVV 182
>gi|413949275|gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays]
Length = 535
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
D L+ LQ + + ++ L T IG VN LRK + E+ +L TLI+ WK + +V
Sbjct: 205 FDSLRRLQLMQLSVSTLKATEIGRAVNRLRKHNSR-EIRHLVCTLIEGWKVLVDEWVSTT 263
Query: 111 N 111
N
Sbjct: 264 N 264
>gi|222623658|gb|EEE57790.1| hypothetical protein OsJ_08341 [Oryza sativa Japonica Group]
Length = 1564
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
I+LN L IG +VN+LR S K+ E+ AK L++NWKK
Sbjct: 352 INLNALQSCSIGKSVNHLR-SHKNPEIQKKAKCLVENWKK 390
>gi|218191559|gb|EEC73986.1| hypothetical protein OsI_08895 [Oryza sativa Indica Group]
Length = 1641
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
I+LN L IG +VN+LR S K+ E+ AK L++NWKK
Sbjct: 429 INLNALQSCSIGKSVNHLR-SHKNPEIQKKAKCLVENWKK 467
>gi|125552338|gb|EAY98047.1| hypothetical protein OsI_19963 [Oryza sativa Indica Group]
Length = 516
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+ L+ LQ + + ++ L T IG VN LRK + ++ +L +TLI+ WK + +V
Sbjct: 203 FESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQ-QIRHLVRTLIEGWKILVDEWVSTT 261
Query: 111 NL 112
N+
Sbjct: 262 NV 263
>gi|51038233|gb|AAT94036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 516
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+ L+ LQ + + ++ L T IG VN LRK + ++ +L +TLI+ WK + +V
Sbjct: 203 FESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQ-QIRHLVRTLIEGWKILVDEWVSTT 261
Query: 111 NL 112
N+
Sbjct: 262 NV 263
>gi|62079249|ref|NP_001014282.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Rattus norvegicus]
gi|81883748|sp|Q5XIC7.1|TEAN2_RAT RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|53734264|gb|AAH83757.1| Similar to RIKEN cDNA 2210012G02 [Rattus norvegicus]
gi|149035766|gb|EDL90447.1| similar to RIKEN cDNA 2210012G02, isoform CRA_b [Rattus norvegicus]
Length = 207
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+ ALQ L + +L T IG VN +R+ S D EV LAK + WK FI ++
Sbjct: 57 NLVAALQELKKKIPSREVLRSTRIGHAVNKVRRHS-DPEVAGLAKEVYTEWKTFIENHLD 115
Query: 109 RMNL 112
R ++
Sbjct: 116 RPSI 119
>gi|307186266|gb|EFN71929.1| Mediator of RNA polymerase II transcription subunit 26 [Camponotus
floridanus]
Length = 556
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + ++ + AK L+++W+ + P V
Sbjct: 29 VDVITALEKTTITKEVLEITRLGKHINELRRKTSNETLAKRAKDLVRHWRDMVLPSVHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|340726940|ref|XP_003401809.1| PREDICTED: hypothetical protein LOC100644741 isoform 2 [Bombus
terrestris]
Length = 530
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 19 VDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMVLPSAHST 78
Query: 111 NLP 113
P
Sbjct: 79 PQP 81
>gi|302772979|ref|XP_002969907.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
gi|300162418|gb|EFJ29031.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
Length = 1416
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 58 QTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
Q L +DL+ L H+G +VNNL KS + E+ A+ L++ WKK
Sbjct: 375 QKLPVDLDALKSCHVGKSVNNL-KSHRMVEIQKKARKLVETWKK 417
>gi|350421418|ref|XP_003492836.1| PREDICTED: hypothetical protein LOC100744824 [Bombus impatiens]
Length = 540
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|325303004|tpg|DAA34536.1| TPA_inf: transcription elongation factor B polypeptide [Amblyomma
variegatum]
Length = 240
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 48 EQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVIN-LAKTLIKNWKKFI 103
E+ L+ L+ LQ + + + +L +T IG TVN+L+ K+D VI A+++I WK+ +
Sbjct: 17 EKVLETLRKLQKVPMTITLLQETGIGRTVNHLK---KNDGVIGETARSVIGAWKQVV 70
>gi|302799250|ref|XP_002981384.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
gi|300150924|gb|EFJ17572.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
Length = 1413
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 58 QTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
Q L +DL+ L H+G +VNNL KS + E+ A+ L++ WKK
Sbjct: 375 QKLPVDLDALKSCHVGKSVNNL-KSHRMVEIQKKARKLVETWKK 417
>gi|194207427|ref|XP_001492860.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Equus caballus]
gi|335772927|gb|AEH58220.1| hypothetical protein [Equus caballus]
Length = 208
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG TVN +R+ S D EV LA+ + W+ FI ++
Sbjct: 58 NLVEALRELKKKIPSREVLKSTRIGHTVNKMRRHS-DSEVACLAREVYTEWRTFIEKHLD 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|222631595|gb|EEE63727.1| hypothetical protein OsJ_18545 [Oryza sativa Japonica Group]
Length = 469
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+ L+ LQ + + ++ L T IG VN LRK + ++ +L +TLI+ WK + +V
Sbjct: 156 FESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQ-QIRHLVRTLIEGWKILVDEWVSTT 214
Query: 111 NL 112
N+
Sbjct: 215 NV 216
>gi|340726938|ref|XP_003401808.1| PREDICTED: hypothetical protein LOC100644741 isoform 1 [Bombus
terrestris]
Length = 540
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|297733825|emb|CBI15072.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
+E L LL+AL L ++L L +IG +VN+LR S K+ E+ A++L+ WKK +
Sbjct: 353 EEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLR-SHKNLEIQKKARSLVDTWKKRVE 409
>gi|224139684|ref|XP_002323227.1| predicted protein [Populus trichocarpa]
gi|222867857|gb|EEF04988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+ + + ++ L T IG VN LRK + ++ +LA+TLI++WK + +
Sbjct: 186 LESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSE-QIRHLARTLIEDWKVLVDEWYSAA 244
Query: 111 NL 112
N+
Sbjct: 245 NV 246
>gi|432095610|gb|ELK26748.1| Transcription elongation factor A N-terminal and central
domain-containing protein 2 [Myotis davidii]
Length = 208
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+E ++ L+ L+ +L T IG TVN +R+ S D EV LAK + W+ FI +
Sbjct: 56 KENLVETLRELKKKIPSKEVLKSTRIGHTVNKMRQHS-DSEVACLAKEVYTEWRTFIEKH 114
Query: 107 VWRMNL 112
R ++
Sbjct: 115 ADRPSI 120
>gi|348668108|gb|EGZ07932.1| hypothetical protein PHYSODRAFT_526167 [Phytophthora sojae]
Length = 139
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
L +L+AL+ L I L +L KT +G+ + L + ++ EV + A+ L+K W
Sbjct: 67 LSVLEALEQLFISLEMLEKTRVGVALTRLSRRAEAPEVQDRARKLLKVW 115
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 5/39 (12%)
Query: 33 KRTSGDNKLTGLVRQEQALDLLKALQTLNIDLNILTKTH 71
K +SGD TG QEQAL+LLK LQ L +DL +LTKT
Sbjct: 16 KMSSGDG--TG---QEQALELLKILQKLPVDLELLTKTR 49
>gi|339246801|ref|XP_003375034.1| RNA polymerase II transcription factor SIII subunit A family
protein [Trichinella spiralis]
gi|316971674|gb|EFV55420.1| RNA polymerase II transcription factor SIII subunit A family
protein [Trichinella spiralis]
Length = 938
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 54 LKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKK 101
L+ L+TL I L IL +T IG+ +N+LR + E + KTL+ WK+
Sbjct: 4 LRKLETLPITLEILQQTGIGIALNSLRNEKEYSERV---KTLVFKWKE 48
>gi|357464497|ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491578|gb|AES72781.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 357
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
++LL+ L ++I L +T IG VN LRK D V L K L+K WK+ + +V
Sbjct: 144 MELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSD-VRRLVKLLVKKWKEIVDDWV 199
>gi|357464499|ref|XP_003602531.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491579|gb|AES72782.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 226
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
++LL+ L ++I L +T IG VN LRK D V L K L+K WK+ + +V
Sbjct: 144 MELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSD-VRRLVKLLVKKWKEIVDDWV 199
>gi|357133677|ref|XP_003568450.1| PREDICTED: uncharacterized protein LOC100834194 [Brachypodium
distachyon]
Length = 535
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
+ L+ LQ + + ++ L T IG VN LRK + ++ +L +TLI++WK + +V
Sbjct: 206 FESLRRLQLMQLSVSTLQATEIGRAVNGLRKHNSQ-QIRHLVQTLIQDWKILVDEWV 261
>gi|291399284|ref|XP_002716070.1| PREDICTED: elongin A [Oryctolagus cuniculus]
Length = 739
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L LK L L I ++IL +T +G VN+LRK + V A+ L+ WKK + V R
Sbjct: 25 LKYLKKLSALPITVDILAETGVGRMVNSLRKH---EHVGGFARELVAQWKKLVP--VERN 79
Query: 111 NLPQD 115
N P +
Sbjct: 80 NEPDE 84
>gi|317575580|ref|NP_001187468.1| uncharacterized protein c1orf83 [Ictalurus punctatus]
gi|308323086|gb|ADO28680.1| uncharacterized protein c1orf83 [Ictalurus punctatus]
Length = 211
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 65 NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+L T IG TVN LRK D +V +LA+ + W+ FI
Sbjct: 74 EVLKSTRIGHTVNTLRKKHPDADVKSLARQVYTRWRTFI 112
>gi|359481563|ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
D L+ LQ + + ++ L T IG VN LRK ++ LA+TLI WK + +V
Sbjct: 154 FDSLRRLQLMVLSVDNLKATEIGKAVNGLRKHGSK-QIRQLARTLIDEWKDMVDEWV 209
>gi|390338229|ref|XP_780780.3| PREDICTED: uncharacterized protein LOC575274 [Strongylocentrotus
purpuratus]
Length = 936
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
L+L+K + L + ++IL K + + + K+ +DE+ +A L+ WK IR
Sbjct: 93 LELIKVFKELPVTIDILKKNNTAKIIKSFSKTEGEDELKAMADNLVATWKGIIR 146
>gi|297741674|emb|CBI32806.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYV 107
D L+ LQ + + ++ L T IG VN LRK ++ LA+TLI WK + +V
Sbjct: 65 FDSLRRLQLMVLSVDNLKATEIGKAVNGLRKHGSK-QIRQLARTLIDEWKDMVDEWV 120
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKN 98
+ LK L + + + +L T IG+ +N + K D +V+ LAK L+KN
Sbjct: 28 EHLKKLNSCQMSIWLLQTTRIGVAINGVCKCCSDKKVVCLAKVLVKN 74
>gi|354466615|ref|XP_003495769.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Cricetulus griseus]
gi|344235630|gb|EGV91733.1| Uncharacterized protein C1orf83-like [Cricetulus griseus]
Length = 208
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L+ ALQ L + +L T IG VN +RK S D EV LAK + WK F ++
Sbjct: 58 NLVTALQELKKKIPSKEVLRSTKIGHIVNKMRKHS-DPEVACLAKEVHTEWKTFFEKHLD 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|357160752|ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+++ + LL+ L ++I L T IG VN+LRK EV L K L++ WK+ + +
Sbjct: 120 EDELVSLLQNLADMDITYKALQDTDIGRHVNSLRKHPS-GEVRQLVKLLVRKWKEIVDGW 178
Query: 107 V 107
V
Sbjct: 179 V 179
>gi|195450773|ref|XP_002072626.1| GK13589 [Drosophila willistoni]
gi|194168711|gb|EDW83612.1| GK13589 [Drosophila willistoni]
Length = 1641
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+V E L ++ AL+ I L T + +N+LR+ +K++++ AK+L+K W++ +
Sbjct: 23 VVNLEAVLSVICALEGTTITKEQLEATRLAKYINHLRRRTKNEQLARRAKSLLKRWREMV 82
>gi|432883684|ref|XP_004074328.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oryzias latipes]
Length = 658
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L LK L L + ++IL +T +G TVN+ RK E LAK+L+ WKK +
Sbjct: 26 LKALKRLGELPMTVHILVETGVGKTVNSFRKHQVAGE---LAKSLVAKWKKLV 75
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+ ++ L +L+ + I+ +IL +T IG+TVN K K++E+ N+AK L+ WK
Sbjct: 86 EIIEDLISLKDVEINKDILKQTKIGVTVNKFTK-IKNEEIQNVAKDLVDKWK 136
>gi|307197644|gb|EFN78823.1| Mediator of RNA polymerase II transcription subunit 26
[Harpegnathos saltator]
Length = 573
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ L+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDIISVLEKTTITKEVLEVTRLGKHINELRRKTDNDALARRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|383861968|ref|XP_003706456.1| PREDICTED: uncharacterized protein LOC100879604 isoform 2
[Megachile rotundata]
Length = 529
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 19 VDVITALEKTAITKEVLEITRLGKYINELRRKTNNDALAKRAKDLVRRWRDMVLPSAHST 78
Query: 111 NLP 113
P
Sbjct: 79 PQP 81
>gi|383861966|ref|XP_003706455.1| PREDICTED: uncharacterized protein LOC100879604 isoform 1
[Megachile rotundata]
Length = 539
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDVITALEKTAITKEVLEITRLGKYINELRRKTNNDALAKRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|224139692|ref|XP_002323230.1| predicted protein [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
L+ L+ L+ + + ++ L T IG VN LRK ++ +LA+TLI++WK + +
Sbjct: 186 LESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSK-QIRHLARTLIEDWKVLVDEWYSAA 244
Query: 111 NL 112
N+
Sbjct: 245 NV 246
>gi|410967334|ref|XP_003990175.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Felis catus]
Length = 208
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 40 KLTGLVRQEQALDLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLI 96
+L G R+ +L++AL+ L + +L T IG TVN +R+ S D EV LA +
Sbjct: 50 ELPGQTRE----NLVEALRELKKKIPSREVLKSTRIGHTVNKMRRHS-DSEVACLAGEVY 104
Query: 97 KNWKKFIRPYVWRMNL 112
W+ FI ++ R ++
Sbjct: 105 TEWRTFIEKHLDRPSI 120
>gi|339244687|ref|XP_003378269.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
gi|316972840|gb|EFV56486.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
Length = 2283
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 53 LLKALQTLN-IDLNILTKTHIGMTVNNLRKS-SKDDEVINLAKTLIKNWKK 101
LL+ L+T ID+++L T+IG TVN +R + K E+ A L+K WKK
Sbjct: 38 LLEELRTYGGIDVDMLVSTNIGKTVNRIRTTFVKCPELFENATFLVKKWKK 88
>gi|431896917|gb|ELK06181.1| hypothetical protein PAL_GLEAN10023779 [Pteropus alecto]
Length = 208
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPY 106
+L++AL+ L + +L T IG TVN +R+ S D EV LA+ + W+ FI +
Sbjct: 58 NLVEALRELKKKIPSKEVLKSTRIGHTVNKMRQHS-DSEVACLAREVYTEWRTFIEKH 114
>gi|380018845|ref|XP_003693331.1| PREDICTED: uncharacterized protein LOC100869589 isoform 2 [Apis
florea]
Length = 530
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 19 VDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 78
Query: 111 NLP 113
P
Sbjct: 79 PQP 81
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
L LL+ L+T ++L + IG+ VN LR++ KD +V L+ LI WK ++
Sbjct: 27 LQLLQPLRTFTATEDLLRHSKIGIAVNRLRQN-KDPKVAQLSSQLINKWKADVK 79
>gi|328789184|ref|XP_003251239.1| PREDICTED: hypothetical protein LOC725023 isoform 2 [Apis
mellifera]
Length = 530
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 19 VDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 78
Query: 111 NLP 113
P
Sbjct: 79 PQP 81
>gi|110759136|ref|XP_001120925.1| PREDICTED: hypothetical protein LOC725023 isoform 1 [Apis
mellifera]
Length = 540
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|380018843|ref|XP_003693330.1| PREDICTED: uncharacterized protein LOC100869589 isoform 1 [Apis
florea]
Length = 540
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 29 VDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 88
Query: 111 NLP 113
P
Sbjct: 89 PQP 91
>gi|380018847|ref|XP_003693332.1| PREDICTED: uncharacterized protein LOC100869589 isoform 3 [Apis
florea]
Length = 516
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 5 VDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 64
Query: 111 NLP 113
P
Sbjct: 65 PQP 67
>gi|325180148|emb|CCA14550.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 508
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 20/95 (21%)
Query: 40 KLTGLVRQE----------QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVI 89
K+ V+QE + ++L L L +D+++L +T+IG VN L+K +D +
Sbjct: 13 KIKSFVKQENWETSHSNVKELQNILNKLTMLKVDMDLLKRTNIGKMVNRLKK-HQDSVIR 71
Query: 90 NLAKTLIKNWKKFIRPYVWRMNLPQDVVKRRELGM 124
+ TL K WK+ V ++ PQ R++GM
Sbjct: 72 GYSSTLTKKWKE----QVGVLSSPQ-----RKIGM 97
>gi|328789186|ref|XP_003251240.1| PREDICTED: hypothetical protein LOC725023 isoform 3 [Apis
mellifera]
Length = 516
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRM 110
+D++ AL+ I +L T +G +N LR+ + +D + AK L++ W+ + P
Sbjct: 5 VDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMVLPSAHST 64
Query: 111 NLP 113
P
Sbjct: 65 PQP 67
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 41 LTGLVRQEQALDLLKAL-QTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNW 99
L G E+ +++LK L Q I IL ++ G+ V LR S EV +LAK ++K W
Sbjct: 13 LHGASTAEETVNILKTLKQEAKITEAILRESKAGLAVGKLR-SHAAKEVSDLAKEIVKKW 71
Query: 100 K 100
K
Sbjct: 72 K 72
>gi|426215588|ref|XP_004002053.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Ovis aries]
Length = 208
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG VN +R+ S D EV LA+ + W+ F++ +V
Sbjct: 58 NLVEALRELKKKIPSQEVLKSTKIGHAVNKMRQHS-DSEVACLAREVYTEWRTFMKKHVN 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|384250506|gb|EIE23985.1| hypothetical protein COCSUDRAFT_53176 [Coccomyxa subellipsoidea
C-169]
Length = 151
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI---RP 105
Q L L+ L L + L +T + +V LRKSS D E+ +A LI+ WKK + +P
Sbjct: 63 QVLGSLRQLSCLLVSKADLEQTGVAFSVRKLRKSSHD-EIQRIASNLIEKWKKLVLAEKP 121
Query: 106 YVWRMNLPQDVVKRRELGM 124
+ Q V +++L M
Sbjct: 122 VQRSAPVQQSVPVQQKLQM 140
>gi|313217990|emb|CBY41346.1| unnamed protein product [Oikopleura dioica]
Length = 251
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 4 PMSLRDSALWSKTRRPKRNLIGSAMLT-----------KKKRTSGDNKLTGLVRQEQALD 52
P +++ S TR+PK+ + A + +K + +++ + + R ++A+D
Sbjct: 15 PTPDSENSACSSTRKPKKKVFKQATIESLGRVVVLKEIEKCKKILEDETSEVERIKEAID 74
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNL 112
L A I+ KT +G +N+LR +D EV AK + K WK F++ R N
Sbjct: 75 SLGAKTPSR---EIIRKTGLGHILNDLR-GHEDAEVQEKAKNVYKKWKSFLKE---RENK 127
Query: 113 P 113
P
Sbjct: 128 P 128
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 48 EQALDLLKALQTLNIDLN-ILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
E LD+LKAL+ + +L +T +G+ VN +KS ++ E++ L K +I +WK+ I
Sbjct: 21 ETVLDILKALEKEVVPTEKLLRETKVGVEVNKFKKS-QNAEIVKLVKRMISSWKETI 76
>gi|241627295|ref|XP_002409821.1| alginate regulatory protein AlgR3, putative [Ixodes scapularis]
gi|215503240|gb|EEC12734.1| alginate regulatory protein AlgR3, putative [Ixodes scapularis]
Length = 449
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 33/53 (62%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
++++ L+ I + L +T +G +N LRK + ++++ AK L+K+W++ +
Sbjct: 5 IEVIGMLERTPITKDALERTRLGRYINELRKKTSNEQLARRAKDLVKSWRRLL 57
>gi|228475906|ref|ZP_04060616.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|418619721|ref|ZP_13182534.1| pyridine nucleotide-disulfide oxidoreductase [Staphylococcus
hominis VCU122]
gi|228270061|gb|EEK11531.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|374823928|gb|EHR87918.1| pyridine nucleotide-disulfide oxidoreductase [Staphylococcus
hominis VCU122]
Length = 495
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 29 LTKKKRTSGDNKLTGLVRQEQALDLLKALQTLN-IDLNILTKTHIGMTVNNLRKSSKDDE 87
LTK K +K G V E+A DL K LN IDL L G T+ +L +
Sbjct: 242 LTKSKFNDIKDKYFGNVPLEKAFDLFKEECELNGIDLQKLVHRRTGDTIKDLNYDLEHPN 301
Query: 88 VINLAKTLIKNWKKFIRPYVWRMNLPQDVVK 118
I + +TLI+N K+ + ++W QD ++
Sbjct: 302 EIGIFQTLIENVKENLN-WIWNSFSRQDQIE 331
>gi|314936135|ref|ZP_07843482.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
gi|313654754|gb|EFS18499.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
Length = 495
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 29 LTKKKRTSGDNKLTGLVRQEQALDLLKALQTLN-IDLNILTKTHIGMTVNNLRKSSKDDE 87
LTK K +K G V E+A DL K LN IDL L G T+ +L +
Sbjct: 242 LTKSKFNDIKDKYFGNVPLEKAFDLFKEECELNGIDLQKLVHRRTGDTIKDLNYDLEHPN 301
Query: 88 VINLAKTLIKNWKKFIRPYVWRMNLPQDVVK 118
I + +TLI+N K+ + ++W QD ++
Sbjct: 302 EIGIFQTLIENVKENLN-WIWNSFSRQDQIE 331
>gi|351713108|gb|EHB16027.1| Serine/threonine-protein phosphatase 1 regulatory subunit 10
[Heterocephalus glaber]
Length = 859
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIR 104
+L LQ L + ++ L + + V L KSS+D+E+ LA L+ +W IR
Sbjct: 94 ILMTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIR 145
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 49 QALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
+ +D L L + I+ +IL +T IG+TVN K K+DE+ ++AK L+ WK
Sbjct: 56 EIIDDLILLNDVEINKDILKQTKIGVTVNKFTK-IKNDEIQSIAKDLVDKWK 106
>gi|348556620|ref|XP_003464119.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Cavia porcellus]
Length = 208
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL+ L + +L T IG TV + K S D EV LAK + WK FI ++
Sbjct: 58 NLVEALRELKKKIPSREVLKSTRIGFTVKKMCKHS-DSEVACLAKEVYTEWKTFIEKHLD 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKD--DEVINLAKTLIKNWKKFIR 104
L L+ L+TL+ID ++L T IG+ + L K + DE+ NLA L WK +R
Sbjct: 35 LATLRRLETLDIDRSMLQNTRIGVILTKLSKYDVEGIDEIKNLASNLTTRWKDSLR 90
>gi|297282483|ref|XP_001103322.2| PREDICTED: transcription elongation factor B polypeptide 3 isoform
1 [Macaca mulatta]
Length = 918
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 59 TLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
TL I ++IL +T +G TVN+LRK + V + A+ L+ WKK +
Sbjct: 179 TLPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLV 220
>gi|327270798|ref|XP_003220175.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Anolis carolinensis]
Length = 208
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL L + +L T IG TVN +RK D++V LAK + W+ FI+ +
Sbjct: 58 NLIEALMELKKKIPSKEVLRSTKIGHTVNKMRKHP-DNDVSALAKEVYSEWRTFIKDHSD 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|270009169|gb|EFA05617.1| hypothetical protein TcasGA2_TC015824 [Tribolium castaneum]
Length = 498
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 41 LTGLVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
++ ++++ L+ + I +L T +G VN LR+ + +D + AK L+K W+
Sbjct: 36 FAAVIDMPAVIEIVSLLEKVTITKELLETTRLGKHVNELRRKTDNDSLSKRAKELVKKWR 95
Query: 101 KFIRP 105
+ P
Sbjct: 96 NMVLP 100
>gi|170034672|ref|XP_001845197.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
gi|167876068|gb|EDS39451.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
Length = 648
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L + L L + + L +T IG TVN LRK D EV AK L+ WK +
Sbjct: 26 LHCIAKLYRLPVSVQHLQETGIGRTVNGLRKY--DGEVGVAAKALVSKWKSMV 76
>gi|395545961|ref|XP_003774864.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Sarcophilus harrisii]
Length = 760
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 44 LVRQEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L ++ L +K L L + +N+L +T IG VN+L K +EV +A+ ++ WK +
Sbjct: 43 LPHPDKVLKYMKRLHDLPMTVNVLAETGIGKLVNSL---CKYEEVGAMARNIVGRWKTLV 99
>gi|356991210|ref|NP_001239336.1| transcription elongation factor B polypeptide 3 [Equus caballus]
Length = 774
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
I ++IL +T +G TVN+LRK + V N A+ L+ WKK +
Sbjct: 38 ITVDILAETGVGKTVNSLRKH---EHVGNFARNLVAQWKKLV 76
>gi|167535081|ref|XP_001749215.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772368|gb|EDQ86021.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 52 DLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
D LK L+ + + +IL T IG+ V+ +++ K E LAK L+ +W+
Sbjct: 27 DCLKELKAVVMTKDILNSTKIGIIVSKVKRDCKLGETQQLAKALLADWR 75
>gi|313243933|emb|CBY14818.1| unnamed protein product [Oikopleura dioica]
Length = 251
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 4 PMSLRDSALWSKTRRPKRNLIGSAMLT-----------KKKRTSGDNKLTGLVRQEQALD 52
P +++ S TR+PK+ ++ A + +K + +++ + + R ++A+D
Sbjct: 15 PTPDSENSASSSTRKPKKKVLKQATIESLGRVVVLKEIEKCKKILEDETSEVERIKEAID 74
Query: 53 LLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVWRMNL 112
L A I+ KT +G +N+LR +D EV AK + K WK F++ R N
Sbjct: 75 SLGAKTPSR---EIIRKTGLGHILNDLR-GHEDAEVQEKAKHVYKKWKSFLKE---RENK 127
Query: 113 P 113
P
Sbjct: 128 P 128
>gi|410966506|ref|XP_003989773.1| PREDICTED: transcription elongation factor B polypeptide 3 [Felis
catus]
Length = 751
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 59 TLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
TL I ++IL +T +G TVN+LRK + V + A+ L+ WKK +
Sbjct: 12 TLPITVDILAETGVGKTVNSLRKH---EHVGSFARDLVAQWKKLV 53
>gi|195573100|ref|XP_002104533.1| GD21008 [Drosophila simulans]
gi|194200460|gb|EDX14036.1| GD21008 [Drosophila simulans]
Length = 640
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 25 EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 57 LQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWK 100
L+ + I+ +IL +T IG+TVN K K++E+ N+AK L+ WK
Sbjct: 60 LKDVEINKDILKQTKIGVTVNKFTK-IKNEEIQNVAKDLVDKWK 102
>gi|195502847|ref|XP_002098404.1| GE10362 [Drosophila yakuba]
gi|194184505|gb|EDW98116.1| GE10362 [Drosophila yakuba]
Length = 645
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 29 LHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|194910508|ref|XP_001982163.1| GG11195 [Drosophila erecta]
gi|190656801|gb|EDV54033.1| GG11195 [Drosophila erecta]
Length = 644
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 51 LDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 29 LHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|193662067|ref|XP_001943463.1| PREDICTED: hypothetical protein LOC100158966 [Acyrthosiphon pisum]
Length = 336
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ L+ L + +L T IG VN LR+ + D ++ AK L++ W+ +
Sbjct: 28 VFEVISTLEQLPVTTEVLEATRIGKMVNELRRKTLDKQLAKRAKELVQRWRNLM 81
>gi|28380977|gb|AAO41456.1| RE20724p [Drosophila melanogaster]
Length = 643
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 25 EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|24649262|ref|NP_732846.1| elongin A, isoform A [Drosophila melanogaster]
gi|51316116|sp|Q9VCP0.1|ELOA1_DROME RecName: Full=Transcription elongation factor B polypeptide 3;
AltName: Full=Elongin-A; AltName: Full=RNA polymerase II
transcription factor SIII subunit A; AltName: Full=dEloA
gi|7300979|gb|AAF56117.1| elongin A, isoform A [Drosophila melanogaster]
gi|375065914|gb|AFA28438.1| FI18652p1 [Drosophila melanogaster]
Length = 643
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 25 EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|195331265|ref|XP_002032323.1| GM26494 [Drosophila sechellia]
gi|194121266|gb|EDW43309.1| GM26494 [Drosophila sechellia]
Length = 643
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 47 QEQALDLLKALQTLNIDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
+++ L + L L I L +T IG TVN LRK S EV AKTL+ WK +
Sbjct: 25 EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRKIS--GEVGVAAKTLVTKWKAMV 79
>gi|112253469|gb|ABI14322.1| unknown [Pfiesteria piscicida]
Length = 285
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 50 ALDLLKALQTLNIDLNILTKTHIGMTVNN-LRKSSKDDEVINLAKTLIKNWKKFIR 104
A + L L L ID N+L +T + + +NN K S E+ N+ L++ WK R
Sbjct: 136 AANPLTQLAALPIDSNVLKRTKVALELNNDFWKKSDVPEIKNMVAVLVREWKNMFR 191
>gi|307219202|ref|NP_001182523.1| uncharacterized protein LOC424657 [Gallus gallus]
Length = 208
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 52 DLLKALQTLNIDL---NILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFIRPYVW 108
+L++AL L + +L T IG TVN +RK S D +V LAK + W+ I+ +
Sbjct: 58 NLMEALGELKKKIPSKEVLLSTKIGHTVNRMRKHS-DPDVAGLAKDVYTEWRASIKHHAN 116
Query: 109 RMNL 112
R ++
Sbjct: 117 RPSI 120
>gi|395854666|ref|XP_003799801.1| PREDICTED: transcription elongation factor B polypeptide 3
[Otolemur garnettii]
Length = 781
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 62 IDLNILTKTHIGMTVNNLRKSSKDDEVINLAKTLIKNWKKFI 103
I ++IL +T +G TVN+LRK + V N A+ L+ WKK +
Sbjct: 38 ITVDILAETGVGKTVNSLRKH---EHVGNFARDLVAQWKKLV 76
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,768,856,444
Number of Sequences: 23463169
Number of extensions: 57791622
Number of successful extensions: 171453
Number of sequences better than 100.0: 675
Number of HSP's better than 100.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 170913
Number of HSP's gapped (non-prelim): 679
length of query: 125
length of database: 8,064,228,071
effective HSP length: 91
effective length of query: 34
effective length of database: 5,929,079,692
effective search space: 201588709528
effective search space used: 201588709528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)