RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14230
         (110 letters)



>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon
           Methanobacterium thermoautotrophicum [TaxId: 145262]}
          Length = 107

 Score = 47.9 bits (114), Expect = 5e-09
 Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 7   KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGE-VYKLIGPILVK 65
           + ++++L  F+Q Q++ Q +  Q+Q +  Q+NE +   +EL    D   VYK  G IL++
Sbjct: 1   QNVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIR 60

Query: 66  QEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTH 103
              +E  + ++++++ +    K  +     +  K    
Sbjct: 61  VAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEM 98


>d2dsrg1 g.28.1.1 (G:151-229) Insulin-like growth factor-binding
          protein 4, IGFBP4 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 79

 Score = 25.7 bits (56), Expect = 0.60
 Identities = 5/22 (22%), Positives = 11/22 (50%)

Query: 19 CQKEYQKVLNQRQLLSAQLNEN 40
          CQ E  + L +     ++ +E+
Sbjct: 3  CQSELHRALERLAASQSRTHED 24


>d2i5ua1 a.275.1.1 (A:2-75) Uncaracterized protein EF2839
          {Enterococcus faecalis [TaxId: 1351]}
          Length = 74

 Score = 25.2 bits (55), Expect = 1.0
 Identities = 8/50 (16%), Positives = 17/50 (34%)

Query: 39 ENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELKR 88
                  +   +     +     L+ + +E A     +  +YI+A LK 
Sbjct: 17 TMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANARNYNYINAILKD 66


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.128    0.333 

Gapped
Lambda     K      H
   0.267   0.0659    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 352,299
Number of extensions: 14404
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 24
Length of query: 110
Length of database: 2,407,596
Length adjustment: 69
Effective length of query: 41
Effective length of database: 1,460,226
Effective search space: 59869266
Effective search space used: 59869266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.0 bits)