Query psy14232
Match_columns 112
No_of_seqs 114 out of 260
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 22:47:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zqm_A Prefoldin beta subunit 99.6 1.3E-15 4.5E-20 104.5 7.3 78 4-81 3-86 (117)
2 1fxk_A Prefoldin; archaeal pro 99.6 1.9E-15 6.6E-20 102.5 7.3 75 7-81 1-81 (107)
3 2zdi_C Prefoldin subunit alpha 98.6 1.9E-08 6.4E-13 72.7 3.5 92 2-93 4-111 (151)
4 1fxk_C Protein (prefoldin); ar 97.2 0.0013 4.4E-08 45.8 7.3 55 8-62 2-58 (133)
5 1wt6_A Myotonin-protein kinase 89.5 2.2 7.4E-05 28.9 7.5 44 4-47 14-57 (81)
6 1fxk_C Protein (prefoldin); ar 83.0 6 0.00021 26.9 7.2 62 8-69 9-86 (133)
7 2fxo_A Myosin heavy chain, car 79.4 12 0.0004 26.0 7.8 46 3-48 51-96 (129)
8 1l8d_A DNA double-strand break 76.2 8.9 0.0003 25.2 6.1 43 7-49 3-45 (112)
9 2pih_A Protein YMCA; regulate 69.1 8.5 0.00029 27.4 5.0 80 7-93 40-121 (151)
10 3aei_A Prefoldin beta subunit 60.1 38 0.0013 23.1 6.8 53 18-70 8-60 (99)
11 1xaw_A Occludin; coiled-coil, 49.7 39 0.0013 24.5 5.7 33 7-39 52-84 (140)
12 2bez_C E2 glycoprotein; coiled 48.1 58 0.002 21.6 6.6 41 2-42 18-58 (77)
13 1am9_A Srebp-1A, protein (ster 47.4 35 0.0012 21.8 4.7 36 9-44 45-80 (82)
14 1x79_B RAB GTPase binding effe 44.8 58 0.002 22.8 5.8 28 14-41 13-40 (112)
15 2v71_A Nuclear distribution pr 43.9 1E+02 0.0035 23.2 7.8 34 16-49 90-123 (189)
16 2zqm_A Prefoldin beta subunit 43.8 64 0.0022 20.9 5.8 39 15-53 7-45 (117)
17 1fxk_A Prefoldin; archaeal pro 42.1 50 0.0017 21.1 4.8 39 15-53 2-40 (107)
18 3tnu_A Keratin, type I cytoske 41.7 42 0.0015 23.1 4.6 30 13-42 44-73 (131)
19 1ik9_A DNA repair protein XRCC 41.5 67 0.0023 24.3 6.1 24 13-36 152-175 (213)
20 3dlq_I Interleukin-22; cytokin 38.5 9.2 0.00031 27.8 0.8 55 7-63 85-139 (151)
21 2no2_A HIP-I, huntingtin-inter 37.9 94 0.0032 21.1 7.6 26 22-47 52-77 (107)
22 3tnu_B Keratin, type II cytosk 37.3 96 0.0033 21.1 6.2 32 11-42 40-71 (129)
23 2v66_B Nuclear distribution pr 36.9 1E+02 0.0036 21.4 7.7 36 14-49 35-70 (111)
24 3ghg_A Fibrinogen alpha chain; 36.5 62 0.0021 28.4 5.7 33 3-35 120-152 (562)
25 2w83_C C-JUN-amino-terminal ki 34.9 94 0.0032 20.6 5.2 47 4-50 6-56 (77)
26 1lrz_A FEMA, factor essential 31.4 1.8E+02 0.0061 23.0 7.4 42 27-69 280-323 (426)
27 3hnw_A Uncharacterized protein 31.2 1.1E+02 0.0039 21.5 5.6 27 25-51 97-123 (138)
28 1i4d_A Arfaptin 2, partner of 29.8 1.9E+02 0.0064 22.1 7.0 43 7-49 7-49 (224)
29 1a92_A Delta antigen; leucine 29.0 50 0.0017 20.3 2.9 36 22-57 5-40 (50)
30 2jee_A YIIU; FTSZ, septum, coi 27.5 1.4E+02 0.0047 19.8 7.8 37 3-39 9-45 (81)
31 3gnl_A Uncharacterized protein 27.3 1.6E+02 0.0054 22.3 6.2 42 5-46 189-237 (244)
32 3oja_B Anopheles plasmodium-re 26.9 82 0.0028 25.5 4.7 19 32-50 559-577 (597)
33 3a98_A DOCK2, dedicator of cyt 26.9 32 0.0011 24.7 2.0 63 11-75 116-181 (184)
34 1n1f_A Interleukin-19; cytokin 26.7 25 0.00087 25.6 1.5 60 5-65 82-144 (159)
35 4dci_A Uncharacterized protein 26.3 1.9E+02 0.0064 21.0 6.2 26 31-56 87-112 (150)
36 1lwu_C Fibrinogen gamma chain; 25.7 1.7E+02 0.0057 23.5 6.3 6 31-36 29-34 (323)
37 3f1i_H Hepatocyte growth facto 25.6 1.4E+02 0.0048 20.6 5.0 32 9-40 57-88 (98)
38 3fs3_A Nucleosome assembly pro 24.4 69 0.0024 26.4 3.8 27 2-28 44-70 (359)
39 2gdl_A Myeloid antimicrobial p 23.8 10 0.00034 21.2 -0.9 16 64-79 1-16 (31)
40 1lqs_L Interleukin-10-like pro 23.7 32 0.0011 25.0 1.5 54 6-65 89-144 (157)
41 1wdg_A E2 glycoprotein; MHV, c 23.6 1.5E+02 0.0051 20.2 4.8 38 3-40 14-51 (94)
42 3kqg_A Langerin, C-type lectin 23.4 1.1E+02 0.0039 20.6 4.3 34 12-45 7-40 (182)
43 4doh_A Interleukin-20; IL10 fa 22.8 46 0.0016 24.0 2.2 58 5-63 82-142 (153)
44 2l5g_A GPS2 protein, G protein 21.8 1.3E+02 0.0044 17.5 4.2 29 9-37 10-38 (38)
45 3nmd_A CGMP dependent protein 20.6 1.8E+02 0.0063 18.8 7.7 44 4-47 23-66 (72)
46 3oja_A Leucine-rich immune mol 20.3 2.5E+02 0.0086 22.1 6.3 44 2-51 419-462 (487)
47 3swk_A Vimentin; cytoskeleton, 20.1 1.9E+02 0.0064 18.7 7.4 8 43-50 75-82 (86)
48 2j5u_A MREC protein; bacterial 20.1 1.2E+02 0.0042 22.9 4.3 53 12-65 24-76 (255)
49 2oeq_A Protein of unknown func 20.0 64 0.0022 21.6 2.4 66 7-79 39-105 (122)
No 1
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=99.61 E-value=1.3e-15 Score=104.52 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeeccceeeecch------hhhhhHhh
Q psy14232 4 EVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWESSRDGLKFCTAR------MGRLLDKM 77 (112)
Q Consensus 4 ~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r------~~~~~~~~ 77 (112)
.||+++|+.+++|+.++++++.+..++++++++++|++.|.+||+.|++|++||++||+++|+.+. +.++.+++
T Consensus 3 ~~~~e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~i 82 (117)
T 2zqm_A 3 NIPPQVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETL 82 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999999874 45555555
Q ss_pred hhhh
Q psy14232 78 SASA 81 (112)
Q Consensus 78 ~~~~ 81 (112)
...-
T Consensus 83 e~~i 86 (117)
T 2zqm_A 83 EVRL 86 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 2
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=99.60 E-value=1.9e-15 Score=102.49 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeeccceeeecch------hhhhhHhhhhh
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWESSRDGLKFCTAR------MGRLLDKMSAS 80 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r------~~~~~~~~~~~ 80 (112)
|++|+.+++|+++|.+++.+..++++++++++|++.|.+||+.|++|++||++||+++|+.+. +.++.+++...
T Consensus 1 ~~~Q~~i~~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~~~e~i~~~ 80 (107)
T 1fxk_A 1 QNVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLR 80 (107)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999999874 45666666654
Q ss_pred h
Q psy14232 81 A 81 (112)
Q Consensus 81 ~ 81 (112)
-
T Consensus 81 i 81 (107)
T 1fxk_A 81 E 81 (107)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=98.62 E-value=1.9e-08 Score=72.66 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhcC-CCCcceeeccceeeecchh-------
Q psy14232 2 VEEVQKKLENELNLFKQCQKEYQKVLNQRQLL---SAQLNENESVQKYCNIVH-LDLGWESSRDGLKFCTARM------- 70 (112)
Q Consensus 2 m~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqL---EaQL~ENe~VleELe~L~-dDa~VYKlVG~v~~k~~r~------- 70 (112)
|+++|+++++..+.+++++.+++.+..++++| .++++|++.++++|+.++ ++..||..+|+-++..+++
T Consensus 4 m~~~~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~ 83 (151)
T 2zdi_C 4 MAQNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAI 83 (151)
T ss_dssp CCSSTTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEE
Confidence 45789999999999999999999999999999 999999999999999999 8999999999766655554
Q ss_pred -----hhhhHhhhhhhchhhhhHHHhhh
Q psy14232 71 -----GRLLDKMSASAFDLFHDRQERER 93 (112)
Q Consensus 71 -----~~~~~~~~~~~~~~~~~~~~~~~ 93 (112)
|=.+.+=..+|-+.+..|.+.-.
T Consensus 84 v~lG~g~~vE~~~~eA~~~l~~ri~~l~ 111 (151)
T 2zdi_C 84 VSVGSGYAVERSIDEAISFLEKRLKEYD 111 (151)
T ss_dssp EEEETTEEEEEEHHHHHHHHHHHHHHHH
T ss_pred EEeCCCeEEEecHHHHHHHHHHHHHHHH
Confidence 44555556667777766665433
No 4
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=97.21 E-value=0.0013 Score=45.82 Aligned_cols=55 Identities=13% Similarity=0.054 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCCcceeeccc
Q psy14232 8 KLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVH--LDLGWESSRDG 62 (112)
Q Consensus 8 kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~--dDa~VYKlVG~ 62 (112)
++++....+++++.+++.+..++++|.+.++|.+.+++.++.|+ ++..++--+|+
T Consensus 2 ~~~~l~~~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~~~~lvplg~ 58 (133)
T 1fxk_C 2 ALAEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGA 58 (133)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEEET
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEcCC
Confidence 46788899999999999999999999999999999999999998 56665544443
No 5
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=89.50 E-value=2.2 Score=28.89 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14232 4 EVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYC 47 (112)
Q Consensus 4 ~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleEL 47 (112)
++|..|+.+|..=|-++.+|.++-..-..++++|+|.+.-.+||
T Consensus 14 eLQSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL 57 (81)
T 1wt6_A 14 ELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDL 57 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999887776666
No 6
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=82.97 E-value=6 Score=26.92 Aligned_cols=62 Identities=11% Similarity=-0.051 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhh-------------hcCCCCcceeecc-ceeeecch
Q psy14232 8 KLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQ--KYCN-------------IVHLDLGWESSRD-GLKFCTAR 69 (112)
Q Consensus 8 kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~Vl--eELe-------------~L~dDa~VYKlVG-~v~~k~~r 69 (112)
.++.--..++.++.+++.+-.....++.-+...+... +..+ .+++.++||-.+| ++++..+.
T Consensus 9 ~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~~~~lvplg~~~yv~a~i~~~~~V~v~lG~g~~vE~~~ 86 (133)
T 1fxk_C 9 QLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNF 86 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEEETTEEEEEECCSTTEEEEEEETTEEEEEEH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEcCCCcEEEEEECCCCEEEEEcCCCEEEEeeH
Confidence 3444444445566666666666666666666555554 3333 3567788999999 68887653
No 7
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=79.39 E-value=12 Score=25.98 Aligned_cols=46 Identities=11% Similarity=0.228 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14232 3 EEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCN 48 (112)
Q Consensus 3 ~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe 48 (112)
..|+.+|+.+.+.+......+..++..+..|+.++.+...=+++.+
T Consensus 51 ~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeee 96 (129)
T 2fxo_A 51 NDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEE 96 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577788888888888899999999999999999998877776654
No 8
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=76.22 E-value=8.9 Score=25.24 Aligned_cols=43 Identities=12% Similarity=0.059 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNI 49 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~ 49 (112)
+.+.+.-..+..+..++.++-..+..+.+++.+.+.+..+|+.
T Consensus 3 ~~~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~~ 45 (112)
T 1l8d_A 3 KLLEELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKK 45 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3455556677888889999999999999999999999999876
No 9
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=69.10 E-value=8.5 Score=27.39 Aligned_cols=80 Identities=11% Similarity=0.090 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhcCCCCcceeeccceeeecchhhhhhHhhhhhhchh
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQ--LLSAQLNENESVQKYCNIVHLDLGWESSRDGLKFCTARMGRLLDKMSASAFDL 84 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQ--qLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r~~~~~~~~~~~~~~~ 84 (112)
++++..+.+|+++|.+++..-..-+ -++....+...+.++++..+ .|-.++-+..++..+|+.|..--.+-
T Consensus 40 ~eaq~li~eF~~~Q~~~~~~q~~Gk~~~~~e~~~el~~l~~~l~~np-------~V~~y~~Ae~~l~~LL~~I~~iI~~~ 112 (151)
T 2pih_A 40 DKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIP-------VIQEFRDSQMEVNDLLQLVAHTISNQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHSH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688899999999999887765432 24444555555555555543 34556666777777777777665555
Q ss_pred hhhHHHhhh
Q psy14232 85 FHDRQERER 93 (112)
Q Consensus 85 ~~~~~~~~~ 93 (112)
..+-.....
T Consensus 113 I~~~i~v~t 121 (151)
T 2pih_A 113 VTNEIITST 121 (151)
T ss_dssp HHHHHHHHT
T ss_pred hhhcccCCC
Confidence 555444433
No 10
>3aei_A Prefoldin beta subunit 2; double helix, coiled coil, chaperone; 1.70A {Thermococcus SP}
Probab=60.11 E-value=38 Score=23.14 Aligned_cols=53 Identities=17% Similarity=0.090 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeeccceeeecchh
Q psy14232 18 QCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWESSRDGLKFCTARM 70 (112)
Q Consensus 18 qLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r~ 70 (112)
.||-+++.+-.-|+-++-...|.+-+.-=+..+..+..+|+....+++-..+-
T Consensus 8 el~lel~qir~lr~~~elkmkeleyaegiit~~k~er~~yraf~dllveitkd 60 (99)
T 3aei_A 8 ELQLELQQIRTLRQSLELKMKELEYAEGIITSLKSERRIYRAFSDLLVEITKD 60 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSCCCEEEEETTEEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 57888999999999999999999999999999999999999999999877653
No 11
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=49.74 E-value=39 Score=24.51 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNE 39 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~E 39 (112)
..++++..+|..|+.+++.+...=++|+++|..
T Consensus 52 ~~F~~dy~EYk~Lhaev~~v~~~F~~Ld~~L~~ 84 (140)
T 1xaw_A 52 RNFDTGLQEYKSLQSVLDEINKELSRLDKELDD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 458999999999999999999999999888775
No 12
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=48.11 E-value=58 Score=21.65 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 2 VEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENES 42 (112)
Q Consensus 2 m~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~ 42 (112)
+..|+.-+..-...++++|.=.++-..+-.+|-.||+.|=.
T Consensus 18 ~~~i~~g~~tts~AL~kiQdVVN~q~~aL~~L~~qL~~NFg 58 (77)
T 2bez_C 18 ISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFG 58 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34567778888888999999999888999999999988743
No 13
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=47.43 E-value=35 Score=21.83 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 9 LENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQ 44 (112)
Q Consensus 9 LQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~Vl 44 (112)
|+..++=++.||.+.+.+-.....|..+++++..+.
T Consensus 45 L~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~~~~~~ 80 (82)
T 1am9_A 45 LRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSLK 80 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 566778888999999999999999999888887653
No 14
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=44.81 E-value=58 Score=22.77 Aligned_cols=28 Identities=14% Similarity=0.362 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 14 NLFKQCQKEYQKVLNQRQLLSAQLNENE 41 (112)
Q Consensus 14 ~k~QqLQkeLQklv~qRQqLEaQL~ENe 41 (112)
....+++.+|.+....|..|+.++++..
T Consensus 13 ~~~~ql~~qL~k~~~~r~~Le~~w~~k~ 40 (112)
T 1x79_B 13 LMLRQANDQLEKTMKDKQELEDFIKQSS 40 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447778889999999988888887753
No 15
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=43.85 E-value=1e+02 Score=23.22 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14232 16 FKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNI 49 (112)
Q Consensus 16 ~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~ 49 (112)
...||.++..+...+.+|-..+.+.+...+.|+.
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr 123 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLER 123 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 5566777777788888888888888887777764
No 16
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=43.77 E-value=64 Score=20.86 Aligned_cols=39 Identities=10% Similarity=-0.037 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy14232 15 LFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLD 53 (112)
Q Consensus 15 k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dD 53 (112)
+.|++..+++.+-...+.+.+++...+.-+.|++.+.++
T Consensus 7 e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~e 45 (117)
T 2zqm_A 7 QVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDE 45 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888999999999999999999999999999887654
No 17
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=42.11 E-value=50 Score=21.11 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy14232 15 LFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLD 53 (112)
Q Consensus 15 k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dD 53 (112)
++|++..+++.+-...+.+.+++...+.=+.|++.+.++
T Consensus 2 ~~Q~~i~~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~E 40 (107)
T 1fxk_A 2 NVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEE 40 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888888888888888889988888888888877654
No 18
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=41.66 E-value=42 Score=23.06 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 13 LNLFKQCQKEYQKVLNQRQLLSAQLNENES 42 (112)
Q Consensus 13 l~k~QqLQkeLQklv~qRQqLEaQL~ENe~ 42 (112)
-..+|.|+-+++.+-.++..|+.++.|.+.
T Consensus 44 rr~iq~L~~el~~l~~~~~sLE~~l~e~e~ 73 (131)
T 3tnu_A 44 RRTMQNLEIELQSQLSMKASLENSLEETKG 73 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345678888888888888888888887764
No 19
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=41.55 E-value=67 Score=24.26 Aligned_cols=24 Identities=17% Similarity=0.405 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 13 LNLFKQCQKEYQKVLNQRQLLSAQ 36 (112)
Q Consensus 13 l~k~QqLQkeLQklv~qRQqLEaQ 36 (112)
-..+.++..++.+++.++...|.+
T Consensus 152 ~~~~~~l~~qlE~~v~~K~~~E~~ 175 (213)
T 1ik9_A 152 LRDWNDVQGRFEKAVSAKEALETD 175 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444
No 20
>3dlq_I Interleukin-22; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} SCOP: a.26.1.3 PDB: 1m4r_A 3g9v_B 3q1s_I 1ykb_A* 3dgc_L*
Probab=38.50 E-value=9.2 Score=27.81 Aligned_cols=55 Identities=5% Similarity=0.025 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeeccce
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWESSRDGL 63 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v 63 (112)
|.+..-+..|..|+++|+.......== ..-...+.++..++.|+ ++.|||.+|.+
T Consensus 85 p~i~~l~nsf~~L~~~L~~C~~~~~c~-~~~~~v~~ik~~f~kL~-~~g~~KAiGEL 139 (151)
T 3dlq_I 85 PYMQEVVPFLARLSNRLSTCHIEGDDL-HIQRNVQKLKDTVKKLG-ESGEIKAIGEL 139 (151)
T ss_dssp THHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHT-HHHHHHHHHTH
T ss_pred CcHHHHHHHHHHHHHHHHhCcccCCcc-chhHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 456677888888888888765321100 11114788899999998 69999999975
No 21
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=37.92 E-value=94 Score=21.12 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14232 22 EYQKVLNQRQLLSAQLNENESVQKYC 47 (112)
Q Consensus 22 eLQklv~qRQqLEaQL~ENe~VleEL 47 (112)
+...+-..++.|++...|...++..+
T Consensus 52 q~~~le~lk~eL~~~~~el~~lq~~l 77 (107)
T 2no2_A 52 QLEVLESLKQELATSQRELQVLQGSL 77 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444333333344333
No 22
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=37.31 E-value=96 Score=21.09 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 11 NELNLFKQCQKEYQKVLNQRQLLSAQLNENES 42 (112)
Q Consensus 11 ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~ 42 (112)
.--..+|.|+-+++.+-.++..|+.++.|.+.
T Consensus 40 elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~ 71 (129)
T 3tnu_B 40 EMNRMIQRLRAEIDNVKKQCANLQNAIADAEQ 71 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 33445678888888888888888888887764
No 23
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=36.92 E-value=1e+02 Score=21.36 Aligned_cols=36 Identities=8% Similarity=0.050 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14232 14 NLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNI 49 (112)
Q Consensus 14 ~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~ 49 (112)
.....||+++.++...+..+-..+++.+..-+.|+.
T Consensus 35 ~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER 70 (111)
T 2v66_B 35 KQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLER 70 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 346679999999999999999999999999999875
No 24
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=36.51 E-value=62 Score=28.44 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 3 EEVQKKLENELNLFKQCQKEYQKVLNQRQLLSA 35 (112)
Q Consensus 3 ~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEa 35 (112)
..|..+|++++..++.||.-+..++..-|+||.
T Consensus 120 qyLKekVdnQlsnIrvLQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 120 EVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888888888888888888888875
No 25
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=34.93 E-value=94 Score=20.61 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhc
Q psy14232 4 EVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQL----NENESVQKYCNIV 50 (112)
Q Consensus 4 ~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL----~ENe~VleELe~L 50 (112)
.+-+++++.+.+..+|-..-+.+-..|--|-+.+ +|.+.+..||..+
T Consensus 6 gmgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~ 56 (77)
T 2w83_C 6 FMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAV 56 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3455666666666666666666555555444443 4455556665544
No 26
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=31.37 E-value=1.8e+02 Score=22.97 Aligned_cols=42 Identities=21% Similarity=0.121 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc--CCCCcceeeccceeeecch
Q psy14232 27 LNQRQLLSAQLNENESVQKYCNIV--HLDLGWESSRDGLKFCTAR 69 (112)
Q Consensus 27 v~qRQqLEaQL~ENe~VleELe~L--~dDa~VYKlVG~v~~k~~r 69 (112)
-.++..++.|+.-++.-+.|...+ .++. +=-+.|.+.+..+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~lAgal~~~~~~ 323 (426)
T 1lrz_A 280 HNKRDNLQQQLDANEQKIEEGKRLQEEHGN-ELPISAGFFFINPF 323 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-EEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cceeEEEEEEEECC
Confidence 556677788888888777777654 2222 22246666665544
No 27
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=31.23 E-value=1.1e+02 Score=21.47 Aligned_cols=27 Identities=7% Similarity=0.080 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy14232 25 KVLNQRQLLSAQLNENESVQKYCNIVH 51 (112)
Q Consensus 25 klv~qRQqLEaQL~ENe~VleELe~L~ 51 (112)
.++..+-+++...+|++..++|++.|.
T Consensus 97 el~~~~~k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 97 ELIAAQIKAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666677766666666553
No 28
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=29.81 E-value=1.9e+02 Score=22.14 Aligned_cols=43 Identities=23% Similarity=0.329 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNI 49 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~ 49 (112)
.+|+..++.|...|..+..++..=.++-.++.+.-.+..+|..
T Consensus 7 ~EL~~klE~l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~ 49 (224)
T 1i4d_A 7 LELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGD 49 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998888888765
No 29
>1a92_A Delta antigen; leucine zipper, coiled-coil, oligomerization; 1.80A {Hepatitis delta virus} SCOP: h.4.6.1 PDB: 1by0_A
Probab=28.99 E-value=50 Score=20.34 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcce
Q psy14232 22 EYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWE 57 (112)
Q Consensus 22 eLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VY 57 (112)
-|.+-+..|.+++---.+...+++.+..|++|++..
T Consensus 5 ~LeqWv~~Rkk~eeler~lrk~kk~iKklEdeNPWL 40 (50)
T 1a92_A 5 ILEQWVSGRKKLEELERDLRKLKKKIKKLEEDNPWL 40 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Confidence 466778889999988899999999999999998764
No 30
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=27.54 E-value=1.4e+02 Score=19.81 Aligned_cols=37 Identities=16% Similarity=0.328 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 3 EEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNE 39 (112)
Q Consensus 3 ~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~E 39 (112)
+.|..++|..++.++-||-++..+=.....|..+.+|
T Consensus 9 eqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e 45 (81)
T 2jee_A 9 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678889999999999999888888888777776665
No 31
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=27.35 E-value=1.6e+02 Score=22.31 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Q psy14232 5 VQKKLENELNLFKQCQKEYQKV-------LNQRQLLSAQLNENESVQKY 46 (112)
Q Consensus 5 Lq~kLQ~el~k~QqLQkeLQkl-------v~qRQqLEaQL~ENe~VleE 46 (112)
+...++.+++.++.+-..+++. ....+.++..++..+.|++|
T Consensus 189 ~~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~~~~i~e~~~~ 237 (244)
T 3gnl_A 189 FKSKWRHEANTWQNIIQTISNNQPVSTENQAKIRELEHKIALVEDVLKE 237 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 4566888889988888888643 33445666666666666654
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=26.89 E-value=82 Score=25.45 Aligned_cols=19 Identities=5% Similarity=-0.060 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q psy14232 32 LLSAQLNENESVQKYCNIV 50 (112)
Q Consensus 32 qLEaQL~ENe~VleELe~L 50 (112)
++....+|+.....|+..+
T Consensus 559 ~~~~l~~e~~~~~~~~~~l 577 (597)
T 3oja_B 559 KQAELRQETSLKRQKVKQL 577 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444433
No 33
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=26.85 E-value=32 Score=24.68 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhhcCCCCcceeeccceeeecchhhhhhH
Q psy14232 11 NELNLFKQCQKEYQKVLNQRQLLSAQ---LNENESVQKYCNIVHLDLGWESSRDGLKFCTARMGRLLD 75 (112)
Q Consensus 11 ~el~k~QqLQkeLQklv~qRQqLEaQ---L~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r~~~~~~ 75 (112)
.+...|..++.-+..++..|.|+.+. ..|...+++.+-..=+. --++.|-=+|-++-.|..||
T Consensus 116 ~~~~~f~~l~~~~~eL~~~R~qlls~~l~~dE~~~l~~~~~~~id~--gn~~l~ldlvvR~~~g~~~d 181 (184)
T 3a98_A 116 SKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDY--GNKILELDLIVRDEDGNILD 181 (184)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH--HHHHTTCCCCCCC-------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HHHhcCCceEEECCCCCcCC
Confidence 34578999999999999999999874 23444444443322111 11344544455555566655
No 34
>1n1f_A Interleukin-19; cytokine, four helix bundle, immune system; HET: NAG; 1.95A {Homo sapiens} SCOP: a.26.1.3
Probab=26.71 E-value=25 Score=25.63 Aligned_cols=60 Identities=18% Similarity=0.178 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhcCCCCcceeeccceee
Q psy14232 5 VQKKLENELNLFKQCQKEYQKVLNQR---QLLSAQLNENESVQKYCNIVHLDLGWESSRDGLKF 65 (112)
Q Consensus 5 Lq~kLQ~el~k~QqLQkeLQklv~qR---QqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~ 65 (112)
+.+.+....+.|..|+++|....... -.-+++ +-.+.++..++.|++.+.+||.+|.+=|
T Consensus 82 ~~~~vssLan~f~~L~~~L~~C~~~~~C~~~~~~~-~~v~~ik~~f~kL~~~~g~~KAiGELDI 144 (159)
T 1n1f_A 82 ILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEAT-NATRVIHDNYDQLEVHAAAIKSLGELDV 144 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHH-HHHHHHHHHHHHSCHHHHHHHHHHTHHH
T ss_pred ccchHHHHHHHHHHHHHHHHhchhccCCCCcHHHH-HHHHHHHHHHhcccchhhHHHHHHHHHH
Confidence 45556666778888888887765322 000111 2356688899999988899999997644
No 35
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=26.31 E-value=1.9e+02 Score=20.97 Aligned_cols=26 Identities=15% Similarity=-0.055 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcc
Q psy14232 31 QLLSAQLNENESVQKYCNIVHLDLGW 56 (112)
Q Consensus 31 QqLEaQL~ENe~VleELe~L~dDa~V 56 (112)
+++..+.+....=++.+..|+-++.|
T Consensus 87 ~~r~e~k~~l~~ql~qv~~L~lGsEv 112 (150)
T 4dci_A 87 SELEEQKRNLLQQQAQVRELEMDQIV 112 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcCEE
Confidence 33333444444445567778877765
No 36
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=25.73 E-value=1.7e+02 Score=23.52 Aligned_cols=6 Identities=50% Similarity=0.285 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy14232 31 QLLSAQ 36 (112)
Q Consensus 31 QqLEaQ 36 (112)
+.|+.+
T Consensus 29 ~~L~~~ 34 (323)
T 1lwu_C 29 QELSEM 34 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 37
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=25.60 E-value=1.4e+02 Score=20.58 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 9 LENELNLFKQCQKEYQKVLNQRQLLSAQLNEN 40 (112)
Q Consensus 9 LQ~el~k~QqLQkeLQklv~qRQqLEaQL~EN 40 (112)
++..-..|..||..|..+-.+|..|++--.|-
T Consensus 57 ~ee~R~~yE~LQDkL~qi~eAR~ALdaLR~eH 88 (98)
T 3f1i_H 57 LDERRLYYEGLQDKLAQIRDARGALSALREEH 88 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667778899999999999999888755443
No 38
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=24.41 E-value=69 Score=26.38 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 2 VEEVQKKLENELNLFKQCQKEYQKVLN 28 (112)
Q Consensus 2 m~~Lq~kLQ~el~k~QqLQkeLQklv~ 28 (112)
|+.||+.++.-+..++.||.++.++-.
T Consensus 44 m~sLp~~v~~rI~aLk~lQ~E~~~le~ 70 (359)
T 3fs3_A 44 MTDLTEEQKETLKKLKLYQKEYYDYES 70 (359)
T ss_dssp -CCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 566888888889999999888776544
No 39
>2gdl_A Myeloid antimicrobial peptide 27; cathelicidin, alpha helix, antimicrobial protein; NMR {Synthetic}
Probab=23.82 E-value=10 Score=21.18 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=13.1
Q ss_pred eeecchhhhhhHhhhh
Q psy14232 64 KFCTARMGRLLDKMSA 79 (112)
Q Consensus 64 ~~k~~r~~~~~~~~~~ 79 (112)
++.++|.||.|.+|+.
T Consensus 1 lvqrgrfgrflrkirr 16 (31)
T 2gdl_A 1 LVQRGRFGRFLRKIRR 16 (31)
T ss_dssp CCCCHHHHSSSSSCCC
T ss_pred CccccHHHHHHHHHHh
Confidence 4678899999998874
No 40
>1lqs_L Interleukin-10-like protein; helix bundle, receptor complex, molecular recognition, structure mimic, immune system; HET: NAG; 2.70A {Human herpesvirus 5} SCOP: a.26.1.3
Probab=23.71 E-value=32 Score=25.02 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhhcCCCCcceeeccceee
Q psy14232 6 QKKLENELNLFKQCQKEYQKVLNQRQLL--SAQLNENESVQKYCNIVHLDLGWESSRDGLKF 65 (112)
Q Consensus 6 q~kLQ~el~k~QqLQkeLQklv~qRQqL--EaQL~ENe~VleELe~L~dDa~VYKlVG~v~~ 65 (112)
.+.+....+.|..|.+.|...- =+ +.+ .-.+.++..++.+ .++.+||.+|.+=|
T Consensus 89 ~~~vssLan~f~~L~~~L~~C~----~~~C~~~-~~~~~ik~~~~~l-~~~g~~KAiGElDI 144 (157)
T 1lqs_L 89 KTELHSMRSTLESIYKDMRQCP----LLGCGDK-SVISRLSQEAERK-SDNGTRKGLSELDT 144 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCG----GGSCSHH-HHHHHHHHHTTSS-TTTTHHHHHHTHHH
T ss_pred hhhHHHHHHHHHHHHHHHHhCC----CCcCCCc-hHHHHHHHHHHHH-HHhHHHHHHHHHHH
Confidence 3445555666666777776542 00 011 2378888899999 67999999997644
No 41
>1wdg_A E2 glycoprotein; MHV, coronavirus, heptad repeat, fusion core, viral entry, V protein; 2.06A {Murine hepatitis virus} SCOP: h.3.3.1 PDB: 1wdf_A
Probab=23.61 E-value=1.5e+02 Score=20.24 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 3 EEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNEN 40 (112)
Q Consensus 3 ~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~EN 40 (112)
..|+.-+..-...++++|.=.++-..+-.+|-.||+-|
T Consensus 14 gnIq~aF~avn~AL~KIQdVVN~Qg~AL~~Lt~QL~~~ 51 (94)
T 1wdg_A 14 GAIQDGFDATNSALGKIQSVVNANAEALNNLLNQLSLV 51 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45666666666777777777777777777777777644
No 42
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=23.37 E-value=1.1e+02 Score=20.57 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 12 ELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQK 45 (112)
Q Consensus 12 el~k~QqLQkeLQklv~qRQqLEaQL~ENe~Vle 45 (112)
++..+++-...+..+...-+.|..+|.....++.
T Consensus 7 ~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~ 40 (182)
T 3kqg_A 7 QIPELKSDLEKASALNTKIRALQGSLENMSKLLK 40 (182)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333344444444444444444444443
No 43
>4doh_A Interleukin-20; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=22.78 E-value=46 Score=23.97 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhcCCCCcceeeccce
Q psy14232 5 VQKKLENELNLFKQCQKEYQKVLNQR---QLLSAQLNENESVQKYCNIVHLDLGWESSRDGL 63 (112)
Q Consensus 5 Lq~kLQ~el~k~QqLQkeLQklv~qR---QqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v 63 (112)
+.+.+-...+.|..|++.|+...... -.-+++ +-...++..++.|++.+.+||.+|.+
T Consensus 82 ~~~~vsslan~f~~L~~~L~~C~~~~~C~~~~~~~-~~~~~ik~~f~kL~~~~g~~KAiGEL 142 (153)
T 4doh_A 82 TLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAM-KKYSQILSHFEKLEPQAAVVKALGEL 142 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHH-HHHHHHHHHHHHSCHHHHHHHHHTTH
T ss_pred hhhhHHHHHHHHHHHHHHHHhCccccCCCCcHHHH-HHHHHHHHHHHhhchhHHHHHHHHHH
Confidence 34445566777778888888764321 000111 12456788999999889999999965
No 44
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=21.82 E-value=1.3e+02 Score=17.52 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14232 9 LENELNLFKQCQKEYQKVLNQRQLLSAQL 37 (112)
Q Consensus 9 LQ~el~k~QqLQkeLQklv~qRQqLEaQL 37 (112)
|++--+++.+++..++.+-..+-||--||
T Consensus 10 LeEtkeQi~~l~~kl~~LkeEKHQLFlQL 38 (38)
T 2l5g_A 10 LEETKEQILKLEEKLLALQEEKHQLFLQL 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55666777888888888888887776653
No 45
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.58 E-value=1.8e+02 Score=18.81 Aligned_cols=44 Identities=7% Similarity=0.039 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14232 4 EVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYC 47 (112)
Q Consensus 4 ~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleEL 47 (112)
.|+.-|+...+++++.+..+..+-..-+..+..+++-...++.|
T Consensus 23 eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 23 DLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555566666666665555555555555555544444433
No 46
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=20.30 E-value=2.5e+02 Score=22.14 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy14232 2 VEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVH 51 (112)
Q Consensus 2 m~~Lq~kLQ~el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~ 51 (112)
.+++..++|.+.+.+.+..+.. +...+....||+..++|++.++
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 419 YEEMYVEQQSVQNNAIRDWDMY------QHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcchhhhhhh------hhHHHHHHHHhhhhhhhhhhhh
No 47
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=20.12 E-value=1.9e+02 Score=18.71 Aligned_cols=8 Identities=13% Similarity=0.185 Sum_probs=3.2
Q ss_pred HHHHhhhc
Q psy14232 43 VQKYCNIV 50 (112)
Q Consensus 43 VleELe~L 50 (112)
.++||..|
T Consensus 75 L~eEl~fL 82 (86)
T 3swk_A 75 LQEEIAFL 82 (86)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444433
No 48
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=20.09 E-value=1.2e+02 Score=22.92 Aligned_cols=53 Identities=6% Similarity=0.041 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeeccceee
Q psy14232 12 ELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKYCNIVHLDLGWESSRDGLKF 65 (112)
Q Consensus 12 el~k~QqLQkeLQklv~qRQqLEaQL~ENe~VleELe~L~dDa~VYKlVG~v~~ 65 (112)
..++-+.|.+++..+-...++++.-..||+...+.|+.-.. ..-|+.+..-.|
T Consensus 24 l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~~~~~-~~~~~~i~A~VI 76 (255)
T 2j5u_A 24 TYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDS-IRDYDPLNASVI 76 (255)
T ss_dssp --CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSC-TTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccCceEEEEEE
Confidence 33455667778888888888888888899988887776432 234565543333
No 49
>2oeq_A Protein of unknown function, DUF964; helix bundle, structural genomics, PSI-2, protein structure initiative; 2.90A {Geobacillus stearothermophilus} SCOP: a.281.1.2
Probab=20.05 E-value=64 Score=21.65 Aligned_cols=66 Identities=5% Similarity=0.025 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhcCCCCcceeeccceeeecchhhhhhHhhhh
Q psy14232 7 KKLENELNLFKQCQKEYQKVLNQRQLL-SAQLNENESVQKYCNIVHLDLGWESSRDGLKFCTARMGRLLDKMSA 79 (112)
Q Consensus 7 ~kLQ~el~k~QqLQkeLQklv~qRQqL-EaQL~ENe~VleELe~L~dDa~VYKlVG~v~~k~~r~~~~~~~~~~ 79 (112)
+..+..+.+|+.+|.+++.....-+.+ +....+...+..++..- -.|..++-+..++..+|+.|..
T Consensus 39 ~ea~~li~~F~~~q~~~q~~q~~G~~~~~e~~~~l~~l~~~l~~n-------~~v~~~~~Ae~~l~~ll~~I~~ 105 (122)
T 2oeq_A 39 ETAYRMFANVRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQN-------EKLARLMALEQQMSITIAEVQQ 105 (122)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 347788999999999998775433212 22333333333333332 1345556666677777766654
Done!