BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14236
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332021782|gb|EGI62128.1| General transcription factor IIE subunit 2 [Acromyrmex echinatior]
Length = 280
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 242/289 (83%), Gaps = 12/289 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE--TSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+LFKK+AL+TP V+KRK E T+KDEP K K +S S+ L +
Sbjct: 1 MDPALLRERELFKKRALTTPIVDKRKQEKETTKDEPPKKKPKPSSVSTGPKL-------D 53
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ YK+M+GS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDVG+KVK WL
Sbjct: 54 MVNYKTMAGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVGSKVKQWLQ 113
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NPKIEV +G +++FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESLPHC+
Sbjct: 114 TEALIQNPKIEVTDG-RFVFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESLPHCD 172
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
K LK +LQNEI+Y+TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD MD+ KI EY
Sbjct: 173 KHLK--NLQNEILYITRPLDKKKIIFYNDKTAQFPIDEEFQKLWRAVAVDAMDDQKIDEY 230
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
LEKQGIR +QDHG KKP RKK +NR+KQFKKPRDNEHLADVLE Y+
Sbjct: 231 LEKQGIRSMQDHGLKKPAPIKRKKPVNRRKQFKKPRDNEHLADVLETYD 279
>gi|322797068|gb|EFZ19357.1| hypothetical protein SINV_01812 [Solenopsis invicta]
Length = 280
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/290 (67%), Positives = 240/290 (82%), Gaps = 14/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE--TSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALL+ER+LFKK+AL+TP V+KRK E +KDEP K KK K S + G
Sbjct: 1 MDPALLKERELFKKRALTTPIVDKRKQEKEATKDEPSK-KKPKVSMVPT-------GPKL 52
Query: 59 NMA-YKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+M YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDVG+KVK WL
Sbjct: 53 DMVNYKTMSGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVGSKVKQWL 112
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
+EAL NPKIEV EG +++FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESLPHC
Sbjct: 113 QSEALVQNPKIEVTEG-RFVFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESLPHC 171
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+K LK SLQNEI+Y+ RP DK+K++FYNDK+AQ +DE+FQKLWR+++VD MD+ KI E
Sbjct: 172 DKHLK--SLQNEILYIIRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAMDDQKIDE 229
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
YLEKQGIR +QDHG KKP RKK +NR+KQFKKPRDNEHLADVLE Y+
Sbjct: 230 YLEKQGIRSMQDHGLKKPAPIKRKKPVNRRKQFKKPRDNEHLADVLETYD 279
>gi|340716845|ref|XP_003396903.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIE
subunit 2-like [Bombus terrestris]
Length = 285
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/291 (66%), Positives = 240/291 (82%), Gaps = 13/291 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE----TSKDEPWKAKKAKTSSSSSSSLSSSLGS 56
MDPALLRER+LFKKKAL+TP+VEKRK E T++DEP+K K +S SS L
Sbjct: 1 MDPALLRERELFKKKALTTPSVEKRKKEQEKDTTRDEPFKKKPKLSSVSSGPKL------ 54
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+ + YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDVG+KVK W
Sbjct: 55 -DMVNYKTMSGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVGSKVKQW 113
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESLPH
Sbjct: 114 LQTEALIKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESLPH 173
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C+K LK SLQNEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD MD+ KI
Sbjct: 174 CDKHLK--SLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAMDDQKID 231
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKP RKK ++++KQFKKPRDNEHLADVLE Y+
Sbjct: 232 EYLEKQGIRSMQDHGPKKPAPIKRKKPVSKRKQFKKPRDNEHLADVLETYD 282
>gi|350402907|ref|XP_003486642.1| PREDICTED: general transcription factor IIE subunit 2-like [Bombus
impatiens]
Length = 285
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/291 (65%), Positives = 240/291 (82%), Gaps = 13/291 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE----TSKDEPWKAKKAKTSSSSSSSLSSSLGS 56
MDPALLRER+LFKK+AL+TP+VEKRK E T++DEP+K K +S SS L
Sbjct: 1 MDPALLRERELFKKRALTTPSVEKRKKEQEKDTTRDEPFKKKPKLSSVSSGPKL------ 54
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+ + YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDVG+KVK W
Sbjct: 55 -DMVNYKTMSGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVGSKVKQW 113
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESLPH
Sbjct: 114 LQTEALIKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESLPH 173
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C+K LK SLQNEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD MD+ KI
Sbjct: 174 CDKHLK--SLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAMDDQKID 231
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKP RKK ++++KQFKKPRDNEHLADVLE Y+
Sbjct: 232 EYLEKQGIRSMQDHGPKKPAPIKRKKPVSKRKQFKKPRDNEHLADVLETYD 282
>gi|380017987|ref|XP_003692922.1| PREDICTED: general transcription factor IIE subunit 2-like [Apis
florea]
Length = 285
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/291 (65%), Positives = 238/291 (81%), Gaps = 13/291 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKD----EPWKAKKAKTSSSSSSSLSSSLGS 56
MDPALLRER+LFKKKALSTPT+EK++ E KD EP+K K +S S+ L
Sbjct: 1 MDPALLRERELFKKKALSTPTIEKKRKEQEKDSIRDEPFKKKPKPSSVSNGPKL------ 54
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+ + YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDVG+KVK W
Sbjct: 55 -DMVNYKTMSGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVGSKVKQW 113
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESLPH
Sbjct: 114 LQTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESLPH 173
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C+K LK SLQNEI+++TRP DK+K++FYNDK+AQ +D++FQKLWRS++VD MD+ KI
Sbjct: 174 CDKHLK--SLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRSVAVDAMDDQKID 231
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKP RKK ++++KQFKKPRDNEHLADVLE Y+
Sbjct: 232 EYLEKQGIRSMQDHGPKKPAPIKRKKPISKRKQFKKPRDNEHLADVLETYD 282
>gi|383858287|ref|XP_003704633.1| PREDICTED: general transcription factor IIE subunit 2-like
[Megachile rotundata]
Length = 285
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 238/291 (81%), Gaps = 13/291 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE----TSKDEPWKAKKAKTSSSSSSSLSSSLGS 56
MDPALLRER+LFKK+ALSTP VEK++ E +++DEP K K ++ S+ L
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKKRKEQDKDSARDEPLKKKPKPSTVSTGPKL------ 54
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+ + YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT+DEILDETNQLDVG+KVK W
Sbjct: 55 -DMVNYKTMSGSTQYKFGVLAKIVKHMKTRHQEGDDHPLTLDEILDETNQLDVGSKVKQW 113
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESLPH
Sbjct: 114 LQTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESLPH 173
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C+K LK SLQNEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD MD+ KI
Sbjct: 174 CDKHLK--SLQNEILFITRPMDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAMDDQKID 231
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKP RKK ++++KQFK+PRDNEHLADVLE Y+
Sbjct: 232 EYLEKQGIRSMQDHGPKKPAPIKRKKPISKRKQFKRPRDNEHLADVLETYD 282
>gi|328785332|ref|XP_001120176.2| PREDICTED: general transcription factor IIE subunit 2-like [Apis
mellifera]
Length = 284
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/290 (65%), Positives = 236/290 (81%), Gaps = 12/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKD---EPWKAKKAKTSSSSSSSLSSSLGSS 57
MDPALLRER+LFKKKAL+TPT+EK++ E KD EP+K K +S S+ L
Sbjct: 1 MDPALLRERELFKKKALTTPTIEKKRKEQEKDIRDEPFKKKPKPSSVSNGPKL------- 53
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ + YK+MSGS+QYKFGVLAKIVKHMK RHQ+GDDHPLT++EILDETNQLDV KVK WL
Sbjct: 54 DMVNYKTMSGSTQYKFGVLAKIVKHMKARHQEGDDHPLTLEEILDETNQLDVDQKVKQWL 113
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESLPHC
Sbjct: 114 QTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESLPHC 173
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+K LK SLQNEI+++TRP DK+K++FYNDK+AQ +D++FQKLWRS++VD MD+ KI E
Sbjct: 174 DKHLK--SLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRSVAVDAMDDQKIDE 231
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
YLEKQGIR +QDHG KKP RKK ++++KQFKKPRDNEHLADVLE Y+
Sbjct: 232 YLEKQGIRSMQDHGPKKPAPIKRKKPISKRKQFKKPRDNEHLADVLETYD 281
>gi|307208277|gb|EFN85709.1| General transcription factor IIE subunit 2 [Harpegnathos saltator]
Length = 281
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/289 (66%), Positives = 237/289 (82%), Gaps = 11/289 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETS--KDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+LFKK+AL+TPTVEK+K E +D+ K K +S S+ L +
Sbjct: 1 MDPALLRERELFKKRALTTPTVEKKKKEQEILRDDSSKKKPKPSSISTGPKL-------D 53
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ YK+M+GS+QYKFGVLAKIVKHMK RHQDGDDHPLT++EILDETNQLDVG KVK WL
Sbjct: 54 MVNYKTMAGSTQYKFGVLAKIVKHMKARHQDGDDHPLTLEEILDETNQLDVGLKVKQWLQ 113
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NPKI+V ++++FK ++KIKD+K LL+LLKQHDLKG+GGILL+D++ESLPHCE
Sbjct: 114 TEALVKNPKIDVTTDSRFVFKAMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESLPHCE 173
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
K LK +LQNEI+++TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD MD+ KI EY
Sbjct: 174 KHLK--ALQNEILFITRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAMDDQKIDEY 231
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
LEKQGIR +QDHG KKP RKK +NR+KQFKKPRDNEHLADVLE Y+
Sbjct: 232 LEKQGIRSMQDHGLKKPAPLKRKKPVNRRKQFKKPRDNEHLADVLETYD 280
>gi|307184669|gb|EFN70998.1| General transcription factor IIE subunit 2 [Camponotus floridanus]
Length = 286
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/290 (67%), Positives = 237/290 (81%), Gaps = 7/290 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSK--DEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+LFKK+AL+TP VEK+K E DE K + SS+S+ G
Sbjct: 1 MDPALLRERELFKKRALTTPIVEKKKQEKETTKDEAPKKNEPPKKKLKVSSIST--GPKL 58
Query: 59 NMA-YKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+M YK+M+GS+QYKFGVLAKIVKHMK RHQDGDDHPLT++EILDETNQLDVG+KVK WL
Sbjct: 59 DMVNYKTMTGSTQYKFGVLAKIVKHMKARHQDGDDHPLTMEEILDETNQLDVGSKVKQWL 118
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NPKIEV +++ FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESLPHC
Sbjct: 119 QTEALLKNPKIEVTSDSRFAFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESLPHC 178
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+K LK SLQNEI+Y+TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD MD+ KI E
Sbjct: 179 DKHLK--SLQNEILYITRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAMDDQKIDE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
YLEKQGIR +QDHG KKP RKK +NR+KQFKKPRDNEHLADVLE Y+
Sbjct: 237 YLEKQGIRSMQDHGLKKPAPIKRKKPVNRRKQFKKPRDNEHLADVLETYD 286
>gi|357605075|gb|EHJ64456.1| transcription initiation factor IIE subunit beta [Danaus plexippus]
Length = 291
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/287 (65%), Positives = 241/287 (83%), Gaps = 8/287 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ F+KKAL+TP+VEK+K + S + K K+ SSSS++ + + ++N
Sbjct: 1 MDPALLREREAFRKKALATPSVEKKKRDDSFKD---DSKKKSKSSSSANAAPKIDATN-- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+M+GSS Y+FGVLA+IV+HMK RHQ+GDDHPL+IDEILDETNQLDVG+K+K WL TE
Sbjct: 56 -YKTMAGSSSYRFGVLARIVRHMKSRHQEGDDHPLSIDEILDETNQLDVGSKIKQWLQTE 114
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPKIE K+IFKPV+KIKD+K LL+LLKQHDLKG+GGI L+DV+ESLPHC++A
Sbjct: 115 ALQNNPKIEHTFDGKFIFKPVYKIKDKKSLLRLLKQHDLKGLGGIFLEDVQESLPHCDRA 174
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK SL EI+Y+TRP+DK+K++FYNDK+A LD+DE+F KLWR+ +VD MD+ KI+EYLE
Sbjct: 175 LK--SLAQEILYITRPSDKKKILFYNDKTATLDVDEEFVKLWRATAVDAMDDAKIEEYLE 232
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KQGI+ +QDHG +KPV+P RKK +++QFKKPRDNEHLADVLE YE
Sbjct: 233 KQGIKSMQDHGPRKPVVPKRKKVTQKRRQFKKPRDNEHLADVLETYE 279
>gi|170057259|ref|XP_001864405.1| transcription initiation factor IIE subunit beta [Culex
quinquefasciatus]
gi|167876727|gb|EDS40110.1| transcription initiation factor IIE subunit beta [Culex
quinquefasciatus]
Length = 295
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 232/288 (80%), Gaps = 11/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR-KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALLRER+ FK++A++TPTVEK+ + E S P KKA+ +++ + +SN
Sbjct: 1 MDPALLREREAFKRRAMATPTVEKKARTEPSYAAPKDVKKARPANAPPK-----MDASN- 54
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YKSMSGSSQY+FGVLAKIVKHM+ RHQDG+DHPLT+++ILDETNQLD+G+ VK WL
Sbjct: 55 --YKSMSGSSQYRFGVLAKIVKHMRSRHQDGEDHPLTLEDILDETNQLDIGSSVKAWLQG 112
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL+NNPKIE +++FK V+KIKD K LL+LLKQ DLKG+GG+LLDDV+ESLPHCEK
Sbjct: 113 EALKNNPKIEATPDGRFMFKAVYKIKDGKSLLRLLKQQDLKGLGGVLLDDVQESLPHCEK 172
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + +EI+++TRP DK+KV+FYND+SA ++EDF KLWRS++VD MD+ KI EYL
Sbjct: 173 VLKNRA--SEIVFITRPNDKKKVLFYNDRSANFQVEEDFVKLWRSVAVDAMDDAKIDEYL 230
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKP +P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EKQGIRSMQDHGPKKPAIPKRKKAQNKKRQFKKPRDNEHLADVLETYE 278
>gi|118786363|ref|XP_315392.3| AGAP005382-PA [Anopheles gambiae str. PEST]
gi|116126285|gb|EAA11794.3| AGAP005382-PA [Anopheles gambiae str. PEST]
Length = 295
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 237/288 (82%), Gaps = 11/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR-KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALLRER+ FK++A++TPTVEK+ K E+S P KK + +S++ + +SN
Sbjct: 1 MDPALLREREAFKRRAMATPTVEKKAKTESSFAAPKDIKKPRPASAAPK-----IDASN- 54
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK+MSGSSQY+FGVLAKIVKHM+ RHQ+GDDHPLT+DEILDETNQLD+G+ VK WL
Sbjct: 55 --YKTMSGSSQYRFGVLAKIVKHMRTRHQEGDDHPLTLDEILDETNQLDIGSSVKTWLQG 112
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL+NNPKIEV +++FK VFKIKD K L++LLKQHDLKG+GG+LLDDV+ESLPHC+K
Sbjct: 113 EALRNNPKIEVTPDGRFLFKSVFKIKDGKSLMRLLKQHDLKGLGGVLLDDVQESLPHCDK 172
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + +EII++TRP DK+K++FYND++A +DEDFQKLWR+++VD MD+ KI EYL
Sbjct: 173 VLKNRA--SEIIFITRPNDKKKILFYNDRTANFQVDEDFQKLWRAVTVDAMDDAKIDEYL 230
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKP+LP RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EKQGIRSMQDHGPKKPLLPKRKKLANKKRQFKKPRDNEHLADVLETYE 278
>gi|289741027|gb|ADD19261.1| transcription initiation factor IIE beta subunit [Glossina
morsitans morsitans]
Length = 291
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/289 (64%), Positives = 228/289 (78%), Gaps = 12/289 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR-KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALL+ER+ FKK+A+ TPTVE++ K ET P K K S+ L ++
Sbjct: 1 MDPALLKEREAFKKRAMVTPTVERKTKLETVSAAPKDECKKKMRPPSAPKLDAN------ 54
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK+M+GSSQYKFGVLAKIVKHM+ RHQ+GDDHPLT++EILDETNQLDVG VK WL+
Sbjct: 55 -TYKTMTGSSQYKFGVLAKIVKHMRTRHQEGDDHPLTLEEILDETNQLDVGQSVKNWLAA 113
Query: 120 EALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
EAL NNPKI+V +G ++ FKPV+KIKD K LL+LLK HDLKG+GGILLDDV+ESLPHCE
Sbjct: 114 EALMNNPKIDVTPDGLRFTFKPVYKIKDGKSLLRLLKSHDLKGLGGILLDDVQESLPHCE 173
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
K LK+ + +EII++ RP DK+K++FYND++A +DE+FQKLWRS +VD MD+ KI EY
Sbjct: 174 KVLKNRA--SEIIFIVRPIDKKKILFYNDRTANFTVDEEFQKLWRSATVDAMDDAKIDEY 231
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
LEKQGIR +QDHG KKPV P R+K ++K+QFKKPRDNEHLADVLE YE
Sbjct: 232 LEKQGIRSMQDHGPKKPV-PKRRKVASKKRQFKKPRDNEHLADVLEIYE 279
>gi|332374850|gb|AEE62566.1| unknown [Dendroctonus ponderosae]
Length = 292
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/287 (68%), Positives = 238/287 (82%), Gaps = 5/287 (1%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFK++AL+TPTVEK+K E SK EP + +K K+ SSS+SS +
Sbjct: 1 MDPALLRERELFKRRALTTPTVEKKKTE-SKPEPVRDEKKKSKSSSASSAPKL----DVN 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY+FGVLAKIVKHMKQRHQDG+ +PLT++EILDETNQLDVGNKVK WL TE
Sbjct: 56 TYKTASGSSQYRFGVLAKIVKHMKQRHQDGESYPLTLEEILDETNQLDVGNKVKQWLQTE 115
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV KY+FK +K+KDRK LLKLLKQ DLKG+GGILL++V+ESLPHCEKA
Sbjct: 116 ALGNNPKIEVSPDGKYLFKATYKLKDRKSLLKLLKQQDLKGLGGILLEEVQESLPHCEKA 175
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK LS QN+II+V RP DK+K++FYND++AQ+ +D++FQKLWRS++VD MD+ KI+EYL+
Sbjct: 176 LKILSNQNDIIFVARPMDKKKILFYNDRTAQMPIDDEFQKLWRSVAVDAMDDQKIEEYLD 235
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KQGIR +QDHG KKP RKK RKK FKKPRDNEHLADVLE YE
Sbjct: 236 KQGIRSMQDHGPKKPTAIKRKKANQRKKTFKKPRDNEHLADVLETYE 282
>gi|157129398|ref|XP_001661672.1| hypothetical protein AaeL_AAEL011462 [Aedes aegypti]
gi|108872235|gb|EAT36460.1| AAEL011462-PA [Aedes aegypti]
Length = 295
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 184/287 (64%), Positives = 231/287 (80%), Gaps = 9/287 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FK++A++TPTVEK+ ++ EP A S + +SN
Sbjct: 1 MDPALLREREAFKRRAMATPTVEKK----ARTEPSYAAPKDIKKPRPSVAPPKIDASN-- 54
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVKHM+ RHQ+G+DHPLT++EILDETNQLD+G+ VK WL TE
Sbjct: 55 -YKTMSGSSQYRFGVLAKIVKHMRSRHQEGEDHPLTLEEILDETNQLDIGSSVKTWLQTE 113
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL+NNPKI+V +Y+FK VFKIKD K L++LLKQHDLKG+GG+LLDDV+ESLPHCEK
Sbjct: 114 ALRNNPKIDVTPEGRYVFKAVFKIKDGKSLMRLLKQHDLKGLGGVLLDDVQESLPHCEKV 173
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK+ + +EI+++TRP DK+KV+FYND+SA +DEDFQKLWR+++VD MD+ KI EYLE
Sbjct: 174 LKNRA--SEIVFITRPNDKKKVLFYNDRSANFQIDEDFQKLWRAVTVDAMDDAKIDEYLE 231
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KQGIR +QDHG KKP++P RKK +K+QFKKPRDNEHLADVLE YE
Sbjct: 232 KQGIRSMQDHGPKKPIIPKRKKAQAKKRQFKKPRDNEHLADVLETYE 278
>gi|195135453|ref|XP_002012147.1| GI16593 [Drosophila mojavensis]
gi|193918411|gb|EDW17278.1| GI16593 [Drosophila mojavensis]
Length = 292
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 229/291 (78%), Gaps = 15/291 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALLRER+ FKK+A++TPTVEK K T + P ++ + K ++ L +S
Sbjct: 1 MDPALLREREAFKKRAMATPTVEK-KNRTERAPPPPSRDDSQKKMRPPTAPKLDAS---- 55
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL
Sbjct: 56 ---TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWL 112
Query: 118 STEALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
+ EAL NNPKIEV +G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESLPH
Sbjct: 113 AGEALNNNPKIEVTPDGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILLEDVQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
CEK LK+ + EI+++ RP DK+K++FYND++A +DE+FQKLWRS +VD MD+ KI
Sbjct: 173 CEKVLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDEEFQKLWRSATVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EYLEKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLETYE 280
>gi|189239625|ref|XP_970060.2| PREDICTED: similar to Transcription factor IIEbeta CG1276-PA
[Tribolium castaneum]
gi|270009449|gb|EFA05897.1| hypothetical protein TcasGA2_TC008709 [Tribolium castaneum]
Length = 291
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/288 (66%), Positives = 237/288 (82%), Gaps = 10/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWK--AKKAKTSSSSSSSLSSSLGSSN 58
MDPALL+ER+LFKK+AL+TPTVE++K + S+ EP + +K+ K+SSSS+ L +
Sbjct: 1 MDPALLKERELFKKRALTTPTVERKKTD-SRPEPTRDDSKRFKSSSSSTPKLDIN----- 54
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
YK+ +GSSQY+FGVLAKIVKHM++RHQ+G+ +PLT++EILDETNQLDVGNKVK WL
Sbjct: 55 --TYKTATGSSQYRFGVLAKIVKHMRKRHQEGETYPLTLEEILDETNQLDVGNKVKQWLQ 112
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL +NPKIEV K++FK +K+KDRK LLKLLKQ DLKG+GG+LLDDV+ESLPHCE
Sbjct: 113 TEALVDNPKIEVTPDGKFLFKAPYKLKDRKSLLKLLKQQDLKGLGGVLLDDVQESLPHCE 172
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KALK L QNEII++TRP DK+KV+FYND++A L +DE+FQKLWRS++VD MD+ KI EY
Sbjct: 173 KALKILQNQNEIIFITRPIDKKKVLFYNDRTATLPIDEEFQKLWRSVAVDAMDDAKIDEY 232
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
LEKQGIR +QDHG KKP+ P R K RKK FKKPRDNEHLADVLE Y
Sbjct: 233 LEKQGIRSMQDHGPKKPIAPKRHKTSQRKKTFKKPRDNEHLADVLETY 280
>gi|194866434|ref|XP_001971881.1| GG15217 [Drosophila erecta]
gi|190653664|gb|EDV50907.1| GG15217 [Drosophila erecta]
Length = 292
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 224/288 (77%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FKK+A++TPTVEK+ + D P A + S + +
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKK---SKPDRP--APPPSSDDSKRKMRPPTAPKLDAT 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL++E
Sbjct: 56 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHCEK
Sbjct: 116 ALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + EI+++ RP DK+K++FYND++A +DE+FQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDEEFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>gi|194747415|ref|XP_001956147.1| GF25060 [Drosophila ananassae]
gi|190623429|gb|EDV38953.1| GF25060 [Drosophila ananassae]
Length = 292
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 226/288 (78%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FKK+A++TPTVEK+ D P + + S ++ +N
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKK---AKVDRPLQPPSSDDSKRRMRPPTAPKLDAN-- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTI+EILDETNQLD+G VK WLS E
Sbjct: 56 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIEEILDETNQLDIGQSVKNWLSGE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPKI+V G+K+ FKPV+KIKD K L++LLKQHDLKG+GG+LL+DV+ESLPHCEK
Sbjct: 116 ALNNNPKIDVSPCGSKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGVLLEDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + EI+++ RP DK+K++FYND++A +DEDFQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDEDFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLETYE 280
>gi|195491720|ref|XP_002093684.1| GE21436 [Drosophila yakuba]
gi|194179785|gb|EDW93396.1| GE21436 [Drosophila yakuba]
Length = 292
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 224/288 (77%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FKK+A++TPTVEK+ + D P A + S + +
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKK---SKPDRP--APPPSSDESKRKMRPPTAPKLDAT 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL++E
Sbjct: 56 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHCEK
Sbjct: 116 ALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>gi|242020794|ref|XP_002430836.1| transcription initiation factor IIE subunit beta, putative
[Pediculus humanus corporis]
gi|212516039|gb|EEB18098.1| transcription initiation factor IIE subunit beta, putative
[Pediculus humanus corporis]
Length = 285
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 228/288 (79%), Gaps = 6/288 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVE-KRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALL+ER+LFKK+AL+TPTVE K+K+E S +K S +S L ++
Sbjct: 1 MDPALLKERELFKKRALTTPTVETKKKSENSTPLSQSKDDSKKSRPRPASSGPKLDAT-- 58
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK+M+GSS YKFGVLAKIV+H+K RHQDGDDHPL+++E+LDETNQLDVGNKVK WL
Sbjct: 59 -TYKTMTGSSNYKFGVLAKIVRHLKARHQDGDDHPLSLEELLDETNQLDVGNKVKQWLLN 117
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NPK+EV K++FKP +K++D+K +LKLLK HDLKG+GGILL+D++ESLP+CEK
Sbjct: 118 EALIRNPKVEVTPEQKFLFKPPYKVRDKKSMLKLLKHHDLKGMGGILLEDIQESLPNCEK 177
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
L+ L+ NEIIY+ RP DK+K++FYND++A L +DE+FQKLWR+++V+ MD+ KI+EYL
Sbjct: 178 ILRILN--NEIIYIQRPMDKKKILFYNDRTANLSIDEEFQKLWRAVAVESMDDQKIEEYL 235
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGI+ +QDH KK P ++K + +K+ FKKPRDNEHLADVL+ Y+
Sbjct: 236 EKQGIKSMQDHNLKKLAAPIKRKKVAKKRTFKKPRDNEHLADVLQTYD 283
>gi|195375106|ref|XP_002046344.1| GJ12845 [Drosophila virilis]
gi|194153502|gb|EDW68686.1| GJ12845 [Drosophila virilis]
Length = 292
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/291 (63%), Positives = 229/291 (78%), Gaps = 15/291 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALLRER+ FKK+A++TPTVEK K T K P ++ + K ++ L +S
Sbjct: 1 MDPALLREREAFKKRAMATPTVEK-KNRTEKAPPPPSRDDSQKKMRPPTAPKLDAS---- 55
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPL+I+EILDETNQLD+G VK WL
Sbjct: 56 ---TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLSIEEILDETNQLDIGQSVKNWL 112
Query: 118 STEALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
S EAL NNPKI+V +G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESLPH
Sbjct: 113 SGEALHNNPKIDVTPDGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILLEDVQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
CEK LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI
Sbjct: 173 CEKVLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EYLEKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLETYE 280
>gi|195587738|ref|XP_002083618.1| GD13833 [Drosophila simulans]
gi|194195627|gb|EDX09203.1| GD13833 [Drosophila simulans]
Length = 292
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 223/288 (77%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FKK+A++TPTVEK+ + D P A + S + +
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKK---SKPDRP--APPPLSDDSRRKMRPPNAPKLDAT 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL++E
Sbjct: 56 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHCEK
Sbjct: 116 ALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ S EI++V RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRSA--EILFVIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KK +P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKK-AIPKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>gi|195168107|ref|XP_002024873.1| GL17873 [Drosophila persimilis]
gi|194108303|gb|EDW30346.1| GL17873 [Drosophila persimilis]
Length = 292
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/291 (63%), Positives = 228/291 (78%), Gaps = 15/291 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALLRER+ FKK+A++TPTVEK KA+ + +P K K ++ L +S
Sbjct: 1 MDPALLREREAFKKRAMATPTVEK-KAKPDRPQPPPISDDAKRKMRPPTAPKLDAS---- 55
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPL I+EILDETNQLD+G VK WL
Sbjct: 56 ---SYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLQIEEILDETNQLDIGQSVKNWL 112
Query: 118 STEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
S EAL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESLPH
Sbjct: 113 SGEALNNNPKIEVSPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILMEDVQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
CEK LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI
Sbjct: 173 CEKVLKNRAA--EILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EYLEKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLEIYE 280
>gi|195012197|ref|XP_001983523.1| GH15942 [Drosophila grimshawi]
gi|193897005|gb|EDV95871.1| GH15942 [Drosophila grimshawi]
Length = 292
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/291 (62%), Positives = 228/291 (78%), Gaps = 15/291 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALLRER+ FKK+A++TPTVEK K T K P ++ + K ++ + SS
Sbjct: 1 MDPALLREREAFKKRAMATPTVEK-KNRTEKAPPPPSRDDSQKKMRPPNAPKMDSS---- 55
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPL+I++ILDETNQLD+G VK WL
Sbjct: 56 ---TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLSIEDILDETNQLDIGQSVKSWL 112
Query: 118 STEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
++EAL NNPKIE G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESLPH
Sbjct: 113 ASEALNNNPKIECTPCGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILMEDVQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
CEK LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI
Sbjct: 173 CEKVLKNRAA--EILFIIRPIDKKKILFYNDRTANFAVDDEFQKLWRSATVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKP +P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EYLEKQGIRSMQDHGLKKP-MPKRKKAANKKRQFKKPRDNEHLADVLEIYE 280
>gi|125977132|ref|XP_001352599.1| GA11796 [Drosophila pseudoobscura pseudoobscura]
gi|54641347|gb|EAL30097.1| GA11796 [Drosophila pseudoobscura pseudoobscura]
Length = 292
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 225/288 (78%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+ FKK+A++TPTVEK+ P + AK ++ L +S
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKKAKPDRPQPPPPSDDAKRKMRPPTA--PKLDAS--- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
+YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPL I+EILDETNQLD+G VK WLS E
Sbjct: 56 SYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLQIEEILDETNQLDIGQSVKNWLSGE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESLPHCEK
Sbjct: 116 ALNNNPKIEVSPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILMEDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRA--AEILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KKPV P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKKPV-PKRKKAANKKRQFKKPRDNEHLADVLEIYE 280
>gi|195454715|ref|XP_002074368.1| GK10558 [Drosophila willistoni]
gi|194170453|gb|EDW85354.1| GK10558 [Drosophila willistoni]
Length = 292
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 228/291 (78%), Gaps = 15/291 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALLRER+ FKK+A++TPTVEK KA+ + P + K K ++ L +S
Sbjct: 1 MDPALLREREAFKKRAMATPTVEK-KAKIERAPPSLSSDDTKRKMRPPTAPKLDAS---- 55
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPL+I++ILDETNQLD+G VK WL
Sbjct: 56 ---SYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLSIEDILDETNQLDIGQSVKNWL 112
Query: 118 STEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
+ EAL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESLPH
Sbjct: 113 AGEALSNNPKIEVSSCGQKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLEDVQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C+K LK+ + EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI
Sbjct: 173 CDKVLKNRA--AEILFIIRPIDKKKILFYNDRTANFLVDDEFQKLWRSATVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KKPV P RKK +K+QFKKPRDNEHLADVLE YE
Sbjct: 231 EYLEKQGIRSMQDHGLKKPV-PKRKKAAGKKRQFKKPRDNEHLADVLETYE 280
>gi|17648009|ref|NP_523923.1| transcription factor IIEbeta, isoform A [Drosophila melanogaster]
gi|4098002|gb|AAD00188.1| TFIIE small subunit [Drosophila melanogaster]
gi|7292476|gb|AAF47880.1| transcription factor IIEbeta, isoform A [Drosophila melanogaster]
gi|66571252|gb|AAY51591.1| IP01109p [Drosophila melanogaster]
gi|220943316|gb|ACL84201.1| TfIIEbeta-PA [synthetic construct]
gi|220953358|gb|ACL89222.1| TfIIEbeta-PA [synthetic construct]
Length = 292
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/290 (63%), Positives = 224/290 (77%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR--KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+ FKK+A++TPTVEK+ + P + K ++ L ++
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKKSKPDRPAPPPPSDDSRRKMRPPNAPRLDAT----- 55
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL+
Sbjct: 56 --TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLA 113
Query: 119 TEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
+EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHC
Sbjct: 114 SEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHC 173
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
EK LK+ S EI++V RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI E
Sbjct: 174 EKVLKNRSA--EILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDE 231
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
YLEKQGIR +QDHG KK +P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 232 YLEKQGIRSMQDHGLKK-AIPKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>gi|195337423|ref|XP_002035328.1| GM14648 [Drosophila sechellia]
gi|194128421|gb|EDW50464.1| GM14648 [Drosophila sechellia]
Length = 292
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/290 (63%), Positives = 224/290 (77%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR--KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+ FKK+A++TPTVEK+ + P + K ++ L ++
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKKSKPDRPAPPPPSDDSRRKMRPPNAPKLDAT----- 55
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL+
Sbjct: 56 --TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLA 113
Query: 119 TEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
+EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHC
Sbjct: 114 SEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHC 173
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
EK LK+ S EI++V RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI E
Sbjct: 174 EKVLKNRSA--EILFVIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDE 231
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
YLEKQGIR +QDHG KK +P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 232 YLEKQGIRSMQDHGLKK-AIPKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>gi|321477662|gb|EFX88620.1| hypothetical protein DAPPUDRAFT_206273 [Daphnia pulex]
Length = 280
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 227/290 (78%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVE-KRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALLRER+ F+KKA +TP VE K+K ET++DE KK S++++ + ++N
Sbjct: 1 MDPALLREREAFRKKAFATPVVENKKKKETTEDE---TKKKPKPPPKSTAVAPRIDATN- 56
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK MSGSSQYKFGVLAKIVKH+K HQDG DH L++++ILDETNQLDVG K+ WL T
Sbjct: 57 --YKHMSGSSQYKFGVLAKIVKHLKTLHQDGGDHALSLEDILDETNQLDVGMKISQWLRT 114
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL +NPKI+V +Y+FKP ++I+DRKGLLKLL+Q DLKG GGILLDD++ESLP+ EK
Sbjct: 115 EALGSNPKIDVTSDGRYMFKPPYRIRDRKGLLKLLRQTDLKGFGGILLDDIQESLPNHEK 174
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK L+ +I+Y+TRP DK+K++FYNDK+A + +D++FQKLWRS++VDG+D++KI+EYL
Sbjct: 175 VLK--VLEKDIVYITRPIDKKKILFYNDKTAHMPIDDEFQKLWRSVAVDGIDDNKIEEYL 232
Query: 240 EKQGIRPIQDHGFKKPVLPG--RKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QD K V+P ++K +K+ FKKPRDNEHL ++LE YE
Sbjct: 233 EKQGIRSMQDTSLK--VMPSKLKRKAAPKKRTFKKPRDNEHLKEILEEYE 280
>gi|240848669|ref|NP_001155552.1| transcription initiation factor IIE subunit beta-like
[Acyrthosiphon pisum]
gi|239799422|dbj|BAH70632.1| ACYPI003970 [Acyrthosiphon pisum]
Length = 287
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 180/289 (62%), Positives = 226/289 (78%), Gaps = 2/289 (0%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFK KA + P VEKR E + ++ +K+K S S SS+
Sbjct: 1 MDPALLRERELFKLKASAIPVVEKRLREDNSNKDDFKRKSKPLPSMPRPPSPPNTSSSLN 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
+YKS SSQYKFGVL KIVK+++ RHQDGDDHPLT+DE+LDETNQLDVG KVK WL TE
Sbjct: 61 SYKSYGQSSQYKFGVLTKIVKYIRARHQDGDDHPLTLDELLDETNQLDVGTKVKTWLETE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NPKIE KY+FKP +K+KDRK LLKLLKQ DLKG+GGI++DD++ESLP+CEKA
Sbjct: 121 ALPGNPKIERTPDGKYMFKPPYKLKDRKALLKLLKQQDLKGLGGIMMDDIQESLPNCEKA 180
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LKH LQNEI+YV RP DK+KVMFYNDKSA +D++EDF+K+WRSI+V+ MD++KI+E+LE
Sbjct: 181 LKH--LQNEILYVCRPGDKKKVMFYNDKSATIDINEDFKKMWRSIAVENMDDEKIEEHLE 238
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
KQGI +QD+G KK RKK + +K+ K+PRDNEHLA+VLE+Y+ +
Sbjct: 239 KQGISSMQDNGIKKVNHVKRKKPVTKKRLSKRPRDNEHLANVLEDYDTL 287
>gi|156540796|ref|XP_001600678.1| PREDICTED: transcription initiation factor IIE subunit beta-like
isoform 1 [Nasonia vitripennis]
gi|345487530|ref|XP_003425712.1| PREDICTED: transcription initiation factor IIE subunit beta-like
isoform 2 [Nasonia vitripennis]
Length = 284
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 179/291 (61%), Positives = 221/291 (75%), Gaps = 14/291 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETS----KDEPWKAKKAKTSSSSSSSLSSSLGS 56
MDPALLRE + FK++A + PTVEK+K E +DE KK KTSS SS L S
Sbjct: 1 MDPALLREHEAFKRRAATQPTVEKKKREPEKEVVRDE--SKKKPKTSSGSSGP---KLDS 55
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
SN YK+MS SQ +FG+L KIV+HMK RHQDG+DHPLT+DEILDETNQLD+G + K W
Sbjct: 56 SN---YKTMSAGSQVRFGILTKIVQHMKARHQDGEDHPLTLDEILDETNQLDIGTRNKQW 112
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L EAL NPKI+ K+ FK +KIKD+K LL+LLKQHDLKG+GGILL+D++ESLPH
Sbjct: 113 LLMEALPTNPKIDTNNEGKFTFKAQYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESLPH 172
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
E+ LKHL+ NE++Y+TR DK+K++FYNDK+AQ +DE+FQKLWR+++VD MD+ KI
Sbjct: 173 SERHLKHLA--NELLYITRAQDKKKIVFYNDKTAQFPVDEEFQKLWRAVAVDAMDDAKID 230
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EYLEKQGIR +QDHG KK RKK N++KQ KKPRDNEHLADVLE Y+
Sbjct: 231 EYLEKQGIRSMQDHGPKKTAPLKRKKPNNKRKQLKKPRDNEHLADVLETYD 281
>gi|312371209|gb|EFR19450.1| hypothetical protein AND_22400 [Anopheles darlingi]
Length = 238
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/223 (70%), Positives = 194/223 (86%), Gaps = 2/223 (0%)
Query: 65 MSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQN 124
MSGSSQY+FGVLAKIVKHM+ RHQ+GDDHPLT+DEILDETNQLD+G+ VK WL EAL+N
Sbjct: 1 MSGSSQYRFGVLAKIVKHMRTRHQEGDDHPLTLDEILDETNQLDIGSSVKTWLQGEALRN 60
Query: 125 NPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHL 184
NPKIE+ +Y+FK VFK+KD K L++LLKQHDLKG+GG+LLDDV+ESLPHCEK LK+
Sbjct: 61 NPKIELTPDGRYLFKAVFKLKDGKSLMRLLKQHDLKGLGGVLLDDVQESLPHCEKVLKNR 120
Query: 185 SLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGI 244
+ +EI+++TRP DK+K+++YND++A +DEDFQKLWRS++VD MD+ KI EYLEKQGI
Sbjct: 121 A--SEIVFITRPNDKKKILYYNDRTANFQVDEDFQKLWRSVTVDAMDDAKIDEYLEKQGI 178
Query: 245 RPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
R +QDHG KKP+LP RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 179 RSMQDHGPKKPLLPKRKKIQNKKRQFKKPRDNEHLADVLETYE 221
>gi|281365637|ref|NP_001163346.1| transcription factor IIEbeta, isoform B [Drosophila melanogaster]
gi|272455047|gb|ACZ94618.1| transcription factor IIEbeta, isoform B [Drosophila melanogaster]
Length = 249
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/228 (70%), Positives = 191/228 (83%), Gaps = 4/228 (1%)
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL++E
Sbjct: 13 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASE 72
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHCEK
Sbjct: 73 ALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEK 132
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ S EI++V RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI EYL
Sbjct: 133 VLKNRSA--EILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYL 190
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
EKQGIR +QDHG KK + P RKK N+K+QFKKPRDNEHLADVLE YE
Sbjct: 191 EKQGIRSMQDHGLKKAI-PKRKKAANKKRQFKKPRDNEHLADVLEVYE 237
>gi|321471128|gb|EFX82101.1| hypothetical protein DAPPUDRAFT_210668 [Daphnia pulex]
Length = 280
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKA-ETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPALLRER+ FKK+A +TP VE RK E DE K + SS+S+S + +SN
Sbjct: 1 MDPALLREREAFKKRAFATPVVENRKKKEVVVDEVKKKPRPPPKSSASTS---KIDASN- 56
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK M+GSSQYKF VLAKIVKH+K HQDG D+ L+++EILD+TNQLD+G K++ WL T
Sbjct: 57 --YKHMTGSSQYKFSVLAKIVKHLKTLHQDGADYALSLEEILDQTNQLDMGMKIRHWLKT 114
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL +NPKIE + +Y FKP +K++DRKGLLKLL+Q DLKG GGILL+D++ESLP+ EK
Sbjct: 115 EALGSNPKIETTQEGRYQFKPPYKVRDRKGLLKLLRQTDLKGYGGILLEDIQESLPNHEK 174
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK L EI+Y+TRP DK+K++FYNDK+A + +D++FQKLWRS+ VDG+D+ KI+EYL
Sbjct: 175 VLK--LLDKEIVYITRPVDKKKILFYNDKTALMPIDDEFQKLWRSVPVDGIDDIKIEEYL 232
Query: 240 EKQGIRPIQDHGFKKPVLPG--RKKNMNRKKQFKKPRDNEHLADVLENYE 287
QGIR +QD K VLP ++K +K+ FK+PRDNEHL ++LE YE
Sbjct: 233 THQGIRSMQDTSQK--VLPSKLKRKAAPKKRTFKRPRDNEHLKEILEEYE 280
>gi|241625997|ref|XP_002407851.1| transcription initiation factor IIE, beta subunit, putative [Ixodes
scapularis]
gi|215501063|gb|EEC10557.1| transcription initiation factor IIE, beta subunit, putative [Ixodes
scapularis]
Length = 281
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/286 (55%), Positives = 211/286 (73%), Gaps = 8/286 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRERD FKK+A++TP VE RK E +D P + A + + SS N
Sbjct: 1 MDPALLRERDAFKKRAMATPVVEARKKE--RDAP--SSNAASQPKKKAKPPKQKDSSYN- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY F VLAKIVKHMKQRH +GD HPL++DEILDETNQLD+G + + WLSTE
Sbjct: 56 -YKTTSGSSQYNFSVLAKIVKHMKQRHLEGDTHPLSLDEILDETNQLDIGARQRHWLSTE 114
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+D++ESLP+ E+
Sbjct: 115 ALQNNPKLQVTPDNKYCFRPAYNLKDRKSLLRLLDKHDQRGMGGVLLEDIQESLPNVERH 174
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK +L + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+D+ KI+EYL+
Sbjct: 175 LK--ALGDAIIYVVRPVDKKKVLFYNDKSLQFTVDEEFQKLWRSVAVEGIDDQKIEEYLQ 232
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +QD G KK ++K + KK + N+H+ D+LE+Y
Sbjct: 233 KQGINSMQDMGVKKVNSAQKRKKPSSKKAKTFKKHNDHMGDILEDY 278
>gi|346468845|gb|AEO34267.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 158/288 (54%), Positives = 210/288 (72%), Gaps = 13/288 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALL+ERD FKK+A++TP VE RK + + A +++S +
Sbjct: 1 MDPALLKERDAFKKRAMATPVVEARKRD-------RDSSAGSAASQPKKKVKPPKPKDTY 53
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY F VLAKIVKHMKQRH +GD HPLT++EILDETNQLD+G + K WLSTE
Sbjct: 54 NYKATSGSSQYNFSVLAKIVKHMKQRHLEGDTHPLTLEEILDETNQLDLGARQKHWLSTE 113
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPK++V KY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP+ E+
Sbjct: 114 ALQNNPKLQVTLDGKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLPNVERH 173
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK +L + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+D+ KI+EYL+
Sbjct: 174 LK--ALGDSIIYVVRPVDKKKVLFYNDKSLQFSVDEEFQKLWRSVAVEGIDDQKIEEYLQ 231
Query: 241 KQGIRPIQDHGFKKPVLPGRKK--NMNRKKQFKKPRDNEHLADVLENY 286
KQGI +QD G KK + ++K + R K FKK N+H+ D+LE+Y
Sbjct: 232 KQGITSMQDMGVKKVNVAQKRKKPSSKRAKTFKK--HNDHMGDILEDY 277
>gi|427787975|gb|JAA59439.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 280
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 208/288 (72%), Gaps = 13/288 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALL+ERD FKK+A++TP VE RK + + A ++S +
Sbjct: 1 MDPALLKERDAFKKRAMATPVVEARKRD-------RDSSAGNAASQPKKKVKPPKPKDTY 53
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY F VLAKIVKHMKQRH +GD HPLT++EILDETNQLD+G + K WL+TE
Sbjct: 54 NYKTTSGSSQYNFSVLAKIVKHMKQRHLEGDTHPLTLEEILDETNQLDLGARQKHWLATE 113
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPK++V KY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP+ E+
Sbjct: 114 ALQNNPKLQVTHDGKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLPNVERH 173
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK L + +IYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+D+ KI+EYL+
Sbjct: 174 LKVLG--DSVIYVVRPVDKKKVLFYNDKSLQFSVDEEFQKLWRSVAVEGIDDQKIEEYLQ 231
Query: 241 KQGIRPIQDHGFKKPVLPGRKK--NMNRKKQFKKPRDNEHLADVLENY 286
KQGI +QD G KK + ++K + R K FKK N+H+ D+LE+Y
Sbjct: 232 KQGITSMQDMGVKKVNVAQKRKKPSSKRAKTFKK--HNDHMGDILEDY 277
>gi|442749413|gb|JAA66866.1| Putative transcription initiation factor iie beta subunit [Ixodes
ricinus]
Length = 273
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/279 (57%), Positives = 207/279 (74%), Gaps = 11/279 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRERD FKK+A++TP VE RK E +D P + A + + SS N
Sbjct: 1 MDPALLRERDAFKKRAMATPVVEARKKE--RDAP--SSNAASQPKKKAKPPKQKDSSYN- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY F VLAKIVKHMKQRH +GD HPL++DEILDETNQLD+G + + WLSTE
Sbjct: 56 -YKTTSGSSQYNFSVLAKIVKHMKQRHLEGDTHPLSLDEILDETNQLDIGARQRHWLSTE 114
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+D++ESLP+ E+
Sbjct: 115 ALQNNPKLQVTPDNKYCFRPAYNLKDRKSLLRLLDKHDQRGMGGVLLEDIQESLPNVERH 174
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK +L + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+D+ KI+EYL+
Sbjct: 175 LK--ALGDAIIYVVRPVDKKKVLFYNDKSLQFTVDEEFQKLWRSVAVEGIDDQKIEEYLQ 232
Query: 241 KQGIRPIQDHGFKKP-VLPGRKKNMNRK--KQFKKPRDN 276
KQGI +QD G K+ LP R+K + K K FKK D+
Sbjct: 233 KQGINSMQDMGVKESRTLPRRRKKPSSKKAKTFKKHNDH 271
>gi|291240303|ref|XP_002740059.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa-like isoform 1 [Saccoglossus kowalevskii]
Length = 285
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/286 (58%), Positives = 209/286 (73%), Gaps = 4/286 (1%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRERD F+K+AL+ PTVEKRK + + KK K SS S ++SS + N
Sbjct: 1 MDPALLRERDAFRKRALALPTVEKRKHKHAHASESSRKKKKPSSPKSQVVASSRPTELN- 59
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK + SS+YKFG+LAKIV HMK RHQ GD + LTIDEILDETNQLDVG K K WL TE
Sbjct: 60 -YKYLKASSKYKFGILAKIVNHMKVRHQRGDTYALTIDEILDETNQLDVGLKQKHWLITE 118
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI+V E NKY FKP + ++ RK LL+LL +HD KG+GGILL+D++ESLP EKA
Sbjct: 119 ALCNNPKIQVSESNKYSFKPKYNLRGRKDLLRLLDRHDQKGLGGILLEDIQESLPMAEKA 178
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K L N+II V RP DK+K++FYNDKS Q +DEDFQKLWRSI+VD +D KI+EYL+
Sbjct: 179 VKVLERMNQIIIVVRPVDKKKILFYNDKSCQFTVDEDFQKLWRSIAVDSLDEGKIEEYLK 238
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +QD G KK + R+K + +FKK N+H+ DVL++Y
Sbjct: 239 KQGITSMQDIGGKKIQVQKRRKPSRKGMKFKK--HNDHMGDVLKDY 282
>gi|62858005|ref|NP_001016555.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
gi|89271975|emb|CAJ82261.1| general transcription factor IIE, polypeptide 2, beta [Xenopus
(Silurana) tropicalis]
gi|213624256|gb|AAI70853.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
gi|213627171|gb|AAI70851.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
Length = 288
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 220/288 (76%), Gaps = 10/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLR+R+LFKK+AL+TP VEKR + +S+ K K + S +S S S GS+ +
Sbjct: 1 MDPALLRDRELFKKRALTTPAVEKRPSASSESSKKKRAKLEPSGTSGSKPSLD-GSNGSF 59
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
KS+SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL +E
Sbjct: 60 NLKSLSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGIKQKQWLMSE 119
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIE+I+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +KA
Sbjct: 120 ALVNNPKIEIIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQKA 178
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD MD++KI+EYL+
Sbjct: 179 IK--ALGDQIVFVTRP-DKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSMDDEKIEEYLK 235
Query: 241 KQGIRPIQDHGFKKPVLP--GRKKNMNRKKQFKKPRDNEHLADVLENY 286
+QGI +QD G KK ++P RKK +++++FK N+HLA VL++Y
Sbjct: 236 RQGISSMQDSGPKK-IIPVQKRKKTTSQRRRFKT--HNDHLAGVLKDY 280
>gi|114051554|ref|NP_001039530.1| general transcription factor IIE subunit 2 [Bos taurus]
gi|118573899|sp|Q2KJF9.1|T2EB_BOVIN RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|86821359|gb|AAI05363.1| General transcription factor IIE, polypeptide 2, beta 34kDa [Bos
taurus]
Length = 289
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/292 (54%), Positives = 213/292 (72%), Gaps = 8/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLRER+LFKK+ALSTP VEKR + K K SS S +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPAVEKRSVSSEASSSKKKKAKLEHGGSSGSKQNSDHSNGSF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +E
Sbjct: 61 NLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMSE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +KA
Sbjct: 121 ALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQKA 179
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL+
Sbjct: 180 VK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLK 236
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+QGI +QD G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 RQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 286
>gi|296472383|tpg|DAA14498.1| TPA: general transcription factor IIE subunit 2 [Bos taurus]
gi|440895025|gb|ELR47323.1| General transcription factor IIE subunit 2 [Bos grunniens mutus]
Length = 289
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/292 (54%), Positives = 213/292 (72%), Gaps = 8/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLRER+LFKK+ALSTP VEKR + K K SS S +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSEASSSKKKKAKLEHGGSSGSKQNSDHSNGSF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +E
Sbjct: 61 NLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMSE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +KA
Sbjct: 121 ALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQKA 179
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL+
Sbjct: 180 VK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLK 236
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+QGI +QD G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 RQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 286
>gi|426256356|ref|XP_004021806.1| PREDICTED: general transcription factor IIE subunit 2-like [Ovis
aries]
Length = 289
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/292 (54%), Positives = 213/292 (72%), Gaps = 8/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLRER+LFKK+ALSTP VEKR + K K SS S +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSEPSSSKKKKAKLEHGGSSGSKQNSDHSNGSF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +E
Sbjct: 61 NLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMSE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +KA
Sbjct: 121 ALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQKA 179
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL+
Sbjct: 180 VK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLK 236
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+QGI +QD G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 RQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 286
>gi|327279883|ref|XP_003224685.1| PREDICTED: general transcription factor IIE subunit 2-like [Anolis
carolinensis]
Length = 290
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 213/292 (72%), Gaps = 9/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT-SSSSSSSLSSSLGSSNN 59
MDP LLRER+LFKK+AL TP VEKR + + K KK K SSSS ++ S+ +
Sbjct: 1 MDPNLLRERELFKKRALCTPAVEKRPGASFESSSSKKKKTKVEQGGSSSSKQNAEHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD MD +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVTRP-DKKKILFYNDKSCQFSVDEEFQKLWRSVPVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
++QGI +QD G KK P+ RK +K++FK N+HLA VL++Y V
Sbjct: 237 KRQGISSMQDAGPKKIVPIQRRRKPASQKKRRFKT--HNDHLAGVLKDYSDV 286
>gi|291240305|ref|XP_002740060.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa-like isoform 2 [Saccoglossus kowalevskii]
Length = 281
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 206/286 (72%), Gaps = 8/286 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRERD F+K+AL+ PTVEKRK + + KK K SS +SS + L
Sbjct: 1 MDPALLRERDAFRKRALALPTVEKRKHKHAHASESSRKKKKPSSPKTSSRPTELN----- 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK + SS+YKFG+LAKIV HMK RHQ GD + LTIDEILDETNQLDVG K K WL TE
Sbjct: 56 -YKYLKASSKYKFGILAKIVNHMKVRHQRGDTYALTIDEILDETNQLDVGLKQKHWLITE 114
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI+V E NKY FKP + ++ RK LL+LL +HD KG+GGILL+D++ESLP EKA
Sbjct: 115 ALCNNPKIQVSESNKYSFKPKYNLRGRKDLLRLLDRHDQKGLGGILLEDIQESLPMAEKA 174
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K L ++II V RP DK+K++FYNDKS Q +DEDFQKLWRSI+VD +D KI+EYL+
Sbjct: 175 VKILG--DQIIIVVRPVDKKKILFYNDKSCQFTVDEDFQKLWRSIAVDSLDEGKIEEYLK 232
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +QD G KK P +K+ +K K + N+H+ DVL++Y
Sbjct: 233 KQGITSMQDIGGKKVSKPVQKRRKPSRKGMKFKKHNDHMGDVLKDY 278
>gi|348578306|ref|XP_003474924.1| PREDICTED: general transcription factor IIE subunit 2-like [Cavia
porcellus]
Length = 293
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 216/296 (72%), Gaps = 12/296 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS----SSSSSSLSSSLGS 56
MDP+LLRER+LFKK+ALSTP VEKR T + K K + SS S +S S
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSLPTESSSSSSSSKKKKAKVEHGGSSGSKQNSDHS 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+ + +K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K W
Sbjct: 61 NGSFNFKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQW 120
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NNPKIEVI+G KY FKP + +KD++ LL+LL QHD +G+GGILL+D+ E LP+
Sbjct: 121 LMTEALVNNPKIEVIDG-KYAFKPKYDLKDKRALLRLLDQHDQRGLGGILLEDIEEGLPN 179
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
+KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+
Sbjct: 180 SQKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIE 236
Query: 237 EYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
EYL++QGI +Q+ G KK P+ +K +K++FK NEH+A VL++Y ++
Sbjct: 237 EYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHMAGVLKDYSDIT 290
>gi|431902281|gb|ELK08782.1| General transcription factor IIE subunit 2 [Pteropus alecto]
Length = 293
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 215/295 (72%), Gaps = 11/295 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS---SSSSSSLSSSLGSS 57
MDP+LLRER+LFKK+ALSTP VEKR + +KK K SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSTSSSSKKKKAKLEHGGSSGSKQNSDHSN 60
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y V+
Sbjct: 237 YLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLQDYSDVA 289
>gi|351701273|gb|EHB04192.1| General transcription factor IIE subunit 2 [Heterocephalus glaber]
Length = 292
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 217/295 (73%), Gaps = 11/295 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS---SSSSSSLSSSLGSS 57
MDP+LLRER+LFKK+ALSTP VEKR + +KK K SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSLPSESSSSSSSKKKKAKVDHGGSSGSKQNSDHSN 60
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ +K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNFKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEVI+G KY FKP + +KD++ LL+LL QHD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVIDG-KYAFKPKYDLKDKRALLRLLDQHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK P+ +K +K++FK NEH+A VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHMAGVLKDYSDIT 289
>gi|260809705|ref|XP_002599645.1| hypothetical protein BRAFLDRAFT_276804 [Branchiostoma floridae]
gi|229284926|gb|EEN55657.1| hypothetical protein BRAFLDRAFT_276804 [Branchiostoma floridae]
Length = 298
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/292 (53%), Positives = 209/292 (71%), Gaps = 10/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET---SKDEPWKAKKAKTSSSSS-SSLSSSLGS 56
MDPALLRER+ FKK+AL+TP VEKRK ++ S +P AKKAK S+ S+ SS G
Sbjct: 1 MDPALLREREAFKKRALATPAVEKRKPKSDDFSSRKP--AKKAKPSAFSAISSSKPKHGK 58
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
S + YK+ G+SQYKF VLAKI+ +MK RHQ+G HPL ++EILDET QL V K W
Sbjct: 59 SGSFDYKTAPGTSQYKFSVLAKIINYMKTRHQNGYTHPLLLEEILDETKQLTVTTATKNW 118
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L TEAL NNPKI+ + K++FKP + +KD+K LL+LL +HD G+GGILL+DV+E LP
Sbjct: 119 LGTEALPNNPKIQRLPDGKFVFKPKYHMKDKKALLRLLDKHDQNGLGGILLEDVQEGLPK 178
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
EKA+K +L + ++ +TRP DK+KV+FYNDK QL++DE+ QKLWRS++VD MD KI+
Sbjct: 179 YEKAIK--ALGDRVLTITRPIDKKKVLFYNDKDCQLNIDEEIQKLWRSVAVDSMDEKKIE 236
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEA 288
EYL +QGI +QD G K + RKK NRK++FK N+H+ +VL +Y +
Sbjct: 237 EYLNRQGISYVQDTGKKIAPMQKRKKVGNRKRKFKTL--NDHMGNVLVDYTS 286
>gi|4504195|ref|NP_002086.1| transcription initiation factor IIE subunit beta [Homo sapiens]
gi|114619590|ref|XP_001168104.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Pan troglodytes]
gi|397521466|ref|XP_003830816.1| PREDICTED: transcription initiation factor IIE subunit beta [Pan
paniscus]
gi|135232|sp|P29084.1|T2EB_HUMAN RecName: Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta; AltName: Full=General transcription
factor IIE subunit 2
gi|37070|emb|CAA45069.1| transcription factor TFIIE beta [Homo sapiens]
gi|239580|gb|AAB20414.1| general transcription factor IIE 34 kda subunit [Homo sapiens]
gi|21040507|gb|AAH30572.1| General transcription factor IIE, polypeptide 2, beta 34kDa [Homo
sapiens]
gi|119583850|gb|EAW63446.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_a [Homo sapiens]
gi|119583853|gb|EAW63449.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_a [Homo sapiens]
gi|208966362|dbj|BAG73195.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[synthetic construct]
gi|410207486|gb|JAA00962.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410263916|gb|JAA19924.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410296794|gb|JAA26997.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410331247|gb|JAA34570.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
Length = 291
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 215/294 (73%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|339522229|gb|AEJ84279.1| general transcription factor IIE subunit 2 [Capra hircus]
Length = 289
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/292 (53%), Positives = 211/292 (72%), Gaps = 8/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLRER+LFKK+ALSTP VEKR + K K SS + +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSEPSSSKKKKAKLEHGGSSGAKQNSDNSNASF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +E
Sbjct: 61 NLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMSE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNP+IEV +G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +KA
Sbjct: 121 ALVNNPQIEVGDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQKA 179
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL+
Sbjct: 180 VK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLK 236
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+QGI +QD G KK P+ +K +K++FK NEHLA VL+ Y ++
Sbjct: 237 RQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKYYSDIA 286
>gi|54696420|gb|AAV38582.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[synthetic construct]
gi|60810069|gb|AAX36090.1| general transcription factor IIE polypeptide 2 [synthetic
construct]
gi|61366471|gb|AAX42864.1| general transcription factor IIE polypeptide 2 beta [synthetic
construct]
Length = 292
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 215/294 (73%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|383412193|gb|AFH29310.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
Length = 291
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 216/294 (73%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G K+ P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKRVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|386781278|ref|NP_001247856.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Macaca
mulatta]
gi|355697846|gb|EHH28394.1| Transcription initiation factor IIE subunit beta [Macaca mulatta]
gi|355779617|gb|EHH64093.1| Transcription initiation factor IIE subunit beta [Macaca
fascicularis]
gi|380812118|gb|AFE77934.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
gi|384940422|gb|AFI33816.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
Length = 291
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 216/294 (73%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G K+ P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKRVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|402877932|ref|XP_003902662.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIE
subunit beta [Papio anubis]
Length = 308
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRE +LFKK+A STP V KR A + KK SS S +S S+
Sbjct: 18 MDPSLLREXELFKKRAFSTPVVXKRSAFSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 77
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 78 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 137
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 138 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 196
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 197 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 253
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 254 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 305
>gi|164518917|ref|NP_001100788.2| general transcription factor II E, polypeptide 2 (beta subunit)
[Rattus norvegicus]
Length = 291
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 209/292 (71%), Gaps = 6/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLR+R+LFKK+ALSTP VEKR + KK SS S NN
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSKKKKAKVEHGGSSGSKQNSDHNNG 60
Query: 61 AY--KSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
++ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 288
>gi|126330761|ref|XP_001372577.1| PREDICTED: general transcription factor IIE subunit 2-like
[Monodelphis domestica]
Length = 291
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 214/293 (73%), Gaps = 9/293 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR-KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDP+LL+ER+LFKK+ALS P+VEKR S K K SS S +S S+ +
Sbjct: 1 MDPSLLKERELFKKRALSNPSVEKRPTLSESTSSSKKKKAKLEQGGSSGSKQNSDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
+K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNFKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+VTRP DK+K++F+NDKS Q +DE+FQKLWRSI+VD MD +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVTRP-DKKKILFFNDKSCQFTVDEEFQKLWRSITVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 KRQGISSMQESGPKKVAPIQRRKKPVSQKKRRFKT--HNEHLAGVLKDYSDIA 287
>gi|332240826|ref|XP_003269588.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Nomascus leucogenys]
gi|441621183|ref|XP_004088734.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
2 [Nomascus leucogenys]
Length = 291
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 215/294 (73%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LF+K+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFRKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|417398448|gb|JAA46257.1| Putative proteinral transcription factor iie subunit [Desmodus
rotundus]
Length = 291
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 214/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRLVSSESSTSSSKKKKAKLEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K+++GSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALTGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEH+A VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHMAGVLKDYSDIA 288
>gi|296221930|ref|XP_002756965.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Callithrix jacchus]
gi|296221932|ref|XP_002756966.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
2 [Callithrix jacchus]
Length = 291
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 214/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LF+K+AL+TP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFRKRALTTPVVEKRSVSSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|432099991|gb|ELK28885.1| General transcription factor IIE subunit 2 [Myotis davidii]
Length = 311
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/295 (53%), Positives = 215/295 (72%), Gaps = 11/295 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS---SSSSSSLSSSLGSS 57
MDP+LLRER+LFKK+ALSTP VEKR + +KK K SS S +S S+
Sbjct: 20 MDPSLLRERELFKKRALSTPVVEKRSVPSESSTSSSSKKKKAKLEHGGSSGSKQNSDHSN 79
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 80 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 139
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
+EAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+
Sbjct: 140 MSEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNS 198
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 199 QKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 255
Query: 238 YLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK P+ +K +K++FK NEH+A VL++Y ++
Sbjct: 256 YLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHMAGVLKDYSDIA 308
>gi|225706730|gb|ACO09211.1| Transcription initiation factor IIE subunit beta [Osmerus mordax]
Length = 290
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 205/288 (71%), Gaps = 8/288 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFKK+ALSTP VEKR + K K SS S S+ S+ N
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKRPTASDSGSSKKKKAKVDKEGSSGSKHSADSSNGNF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+++GSS YKFG LAKIV +MK RHQ GD H LT++EILDET LD+G K K WL TE
Sbjct: 61 NLKALTGSSGYKFGCLAKIVNYMKTRHQRGDTHHLTLEEILDETKLLDIGLKQKQWLMTE 120
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NN KIEV +G KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ KA
Sbjct: 121 ALANNAKIEVRDG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNSAKA 179
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDK Q D+DE+FQKLWRSI VD MD +KI++YL+
Sbjct: 180 IK--ALGDQIIFVTRP-DKKKILFYNDKHCQFDVDEEFQKLWRSIPVDSMDEEKIEDYLK 236
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+QGI +Q+ G KK P+ +K +K++FK N+HLA VLE+Y
Sbjct: 237 RQGISSMQETGPKKVLPIQKRKKPGGQKKRRFKT--HNDHLAGVLEDY 282
>gi|147902228|ref|NP_001089256.1| general transcription factor IIE subunit 2 [Xenopus laevis]
gi|267060|sp|P29540.1|T2EB_XENLA RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|65133|emb|CAA78245.1| transcription factor TFIIE-beta [Xenopus laevis]
gi|58403336|gb|AAH89287.1| MGC84983 protein [Xenopus laevis]
Length = 288
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 224/292 (76%), Gaps = 10/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLR+R+LFKK+AL+TP VEKR + +S+ K K + SS+S S SS GS+ +
Sbjct: 1 MDPALLRDRELFKKRALTTPAVEKRPSASSESSKKKRAKLELSSTSGSKPSSD-GSNGSF 59
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
KS+SGSS YKFGVLAKIV +MK RHQ GD +PLT++EILDET LD+G K K WL +E
Sbjct: 60 NLKSLSGSSGYKFGVLAKIVNYMKTRHQRGDTYPLTLEEILDETQHLDIGIKQKQWLMSE 119
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIE+I+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +KA
Sbjct: 120 ALVNNPKIEIIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQKA 178
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++I++VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD MD++KI+EYL+
Sbjct: 179 IK--ALGDQIVFVTRP-DKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSMDDEKIEEYLK 235
Query: 241 KQGIRPIQDHGFKKPVLP--GRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+QGI +Q+ G KK ++P RKK +++++FK N+HLA VL++Y V+
Sbjct: 236 RQGISSMQESGPKK-IIPVQKRKKATSQRRRFKT--HNDHLAGVLKDYTDVA 284
>gi|228300|prf||1802389A transcription factor IIE:SUBUNIT=beta
Length = 291
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 214/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIE I+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIENIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|403294312|ref|XP_003938138.1| PREDICTED: transcription initiation factor IIE subunit beta
[Saimiri boliviensis boliviensis]
Length = 291
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LF+K+AL+TP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFRKRALTTPVVEKRSVSSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K +SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKVLSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|301770905|ref|XP_002920868.1| PREDICTED: general transcription factor IIE subunit 2-like
[Ailuropoda melanoleuca]
gi|281347422|gb|EFB23006.1| hypothetical protein PANDA_009680 [Ailuropoda melanoleuca]
Length = 290
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/293 (55%), Positives = 216/293 (73%), Gaps = 9/293 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS-SSSSSSLSSSLGSSNN 59
MDP+LLRER+LFKK+ALSTP VEKR + K KKAK SS S +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSKKKKAKLEHGGSSGSKQNSDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL T
Sbjct: 61 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMT 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL
Sbjct: 180 AVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y V+
Sbjct: 237 KRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDVA 287
>gi|395850277|ref|XP_003797720.1| PREDICTED: general transcription factor IIE subunit 2-like
[Otolemur garnettii]
Length = 292
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 7/293 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS---SSSSSSLSSSLGSS 57
MDP+LLRER+LFKK+ALSTP VEKR + +KK K SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSSSKKKKAKVEHGGSSGSKQNSDHSN 60
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>gi|228298|prf||1802387B transcription factor IIE:SUBUNIT=small 34kD
Length = 291
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIE I+G KY FKP + +D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALYNNPKIEYIDG-KYAFKPKYNYRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|349501098|ref|NP_001231790.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Sus
scrofa]
Length = 291
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 214/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LF+K+ALSTP VEKR + KK SSSS +S S+
Sbjct: 1 MDPSLLRERELFRKRALSTPVVEKRSVSSESSSSSSKKKKAKLEHGGSSSSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 288
>gi|149742593|ref|XP_001495603.1| PREDICTED: general transcription factor IIE subunit 2-like [Equus
caballus]
Length = 290
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 216/293 (73%), Gaps = 9/293 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTS-SSSSSSLSSSLGSSNN 59
MDP+LLRER+LFKK+ALSTP VEKR + K KKAK SS S +S S+ +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSKKKKAKLEHGGSSGSKQNSDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL T
Sbjct: 61 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMT 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL
Sbjct: 180 AVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 KRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 287
>gi|387916104|gb|AFK11661.1| general transcription factor IIE subunit 2-like protein
[Callorhinchus milii]
Length = 289
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 215/293 (73%), Gaps = 13/293 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALL+ER+LFKK+ALS P +EKRK T+ + KK + SSS +S S N
Sbjct: 1 MDPALLKERELFKKRALSNPVIEKRKV-TASSDSSSKKKKRPDQGSSSKQNSENRSFN-- 57
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
Y+ + GSS YKFGVLAKIV +MK RHQ GD +PLT++EILDET LD+G + K WL +E
Sbjct: 58 -YRGLPGSSGYKFGVLAKIVNYMKTRHQRGDTYPLTLEEILDETKLLDIGMRQKQWLMSE 116
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI+V++G KY+FKP + +KD+K LL+LL +HD +G+GGILLDD+ E LP+ +KA
Sbjct: 117 ALINNPKIDVLDG-KYVFKPKYNLKDKKALLRLLDKHDQRGLGGILLDDIEEGLPNSQKA 175
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDKS Q +DE+FQKLWR I VD MD +KI+EYL+
Sbjct: 176 IK--ALGDQIIFVTRP-DKKKILFYNDKSCQFTMDEEFQKLWRGIPVDSMDEEKIEEYLK 232
Query: 241 KQGIRPIQDHGFKKPVLPGRKK--NMNRKKQFKKPRDNEHLADVLENY-EAVS 290
+QGI +Q+ G KK + ++K RK++FK N+H+A +LE+Y E VS
Sbjct: 233 RQGISSMQETGPKKVMCIQKRKKPGSQRKRKFKT--HNDHMAGILEDYTEGVS 283
>gi|410956135|ref|XP_003984700.1| PREDICTED: general transcription factor IIE subunit 2-like [Felis
catus]
Length = 291
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSSKKKKAKLEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAIK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 288
>gi|268838606|ref|NP_080860.3| general transcription factor IIE subunit 2 [Mus musculus]
gi|268838637|ref|NP_001161393.1| general transcription factor IIE subunit 2 [Mus musculus]
gi|268838784|ref|NP_001161394.1| general transcription factor IIE subunit 2 [Mus musculus]
gi|62901050|sp|Q9D902.2|T2EB_MOUSE RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|18043581|gb|AAH20016.1| General transcription factor II E, polypeptide 2 (beta subunit)
[Mus musculus]
gi|74142361|dbj|BAE31938.1| unnamed protein product [Mus musculus]
gi|74182609|dbj|BAE34662.1| unnamed protein product [Mus musculus]
gi|74219536|dbj|BAE29539.1| unnamed protein product [Mus musculus]
Length = 292
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/293 (52%), Positives = 209/293 (71%), Gaps = 7/293 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN- 59
MDP+LLR+R+LFKK+ALSTP VEKR + +KK K S S S +N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 60 --MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>gi|449283378|gb|EMC90037.1| General transcription factor IIE subunit 2 [Columba livia]
Length = 291
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 212/292 (72%), Gaps = 9/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN-N 59
M+ +LLRER+LFKK+ALSTP VEKR A ++ K KKAK SS + SN +
Sbjct: 1 MEASLLRERELFKKRALSTPAVEKRPAPSADSASAKKKKAKVEQGGSSGSKQNTDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+V RP DK+K++FYNDKS Q +DE+FQKLWRSI VD MD +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVNRP-DKKKILFYNDKSCQFTVDEEFQKLWRSIPVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
++QGI +QD G KK P+ +K +K++FK N+HLA VL++Y V
Sbjct: 237 KRQGISSMQDAGPKKIAPIQRRKKPASQKKRRFKT--HNDHLAGVLKDYSDV 286
>gi|354474939|ref|XP_003499687.1| PREDICTED: general transcription factor IIE subunit 2-like
[Cricetulus griseus]
gi|344242333|gb|EGV98436.1| General transcription factor IIE subunit 2 [Cricetulus griseus]
Length = 291
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/292 (53%), Positives = 210/292 (71%), Gaps = 6/292 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRK--AETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDP+LLR+R+LFKK+ALSTP VEKR +E K K SS S ++ S+
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSELPSASSKKKKAKVEHGGSSGSKQNADHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI++Y
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEDY 236
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 288
>gi|344281666|ref|XP_003412599.1| PREDICTED: general transcription factor IIE subunit 2-like
[Loxodonta africana]
Length = 291
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSLSKKKKAKLEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQQGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSH 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD++KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDDEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|355693882|gb|AER99484.1| proteinral transcription factor IIE, polypeptide 2, beta 34kDa
[Mustela putorius furo]
Length = 292
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR + KK SS S +S S+
Sbjct: 3 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSSKKKKAKLEHGGSSGSKQNSDHSNG 62
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 63 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 122
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 123 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 181
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 182 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 238
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 239 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 290
>gi|359321502|ref|XP_003639611.1| PREDICTED: general transcription factor IIE subunit 2-like [Canis
lupus familiaris]
Length = 291
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 212/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSSKKKKAKLEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIA 288
>gi|224049137|ref|XP_002196086.1| PREDICTED: general transcription factor IIE subunit 2-like
[Taeniopygia guttata]
Length = 291
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 212/292 (72%), Gaps = 9/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN-N 59
MDP+LLRER+LFKK+ALSTP VEKR A +S K KKAK SSS + SN +
Sbjct: 1 MDPSLLRERELFKKRALSTPAVEKRPALSSDSSASKKKKAKVEQGGSSSSKQNTDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 121 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+V RP DK+K++FYNDKS +DE+FQKLWRSI VD MD +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVNRP-DKKKILFYNDKSCHFAVDEEFQKLWRSIPVDSMDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
++QGI +Q+ G K+ P+ +K +K++FK N+HL VL++Y V
Sbjct: 237 KRQGISSMQETGPKRIAPIQRRKKPASQKKRRFKT--HNDHLVGVLKDYSDV 286
>gi|11611843|gb|AAG39077.1| general transcription factor [Homo sapiens]
Length = 291
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 213/294 (72%), Gaps = 10/294 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKENSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ G HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGXTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYXVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNXQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K + ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--AXGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 288
>gi|26353328|dbj|BAC40294.1| unnamed protein product [Mus musculus]
gi|148703471|gb|EDL35418.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703472|gb|EDL35419.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703473|gb|EDL35420.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703475|gb|EDL35422.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
Length = 292
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 154/293 (52%), Positives = 209/293 (71%), Gaps = 7/293 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN- 59
MDP+LLR+R+LFKK+ALSTP VEKR + +KK K S S S +N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 60 --MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++V+ MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVESMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>gi|12841072|dbj|BAB25066.1| unnamed protein product [Mus musculus]
Length = 292
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 208/293 (70%), Gaps = 7/293 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN- 59
MDP+LLR+R+LFKK+ALST VEKR + +KK K S S S +N
Sbjct: 1 MDPSLLRDRELFKKRALSTLVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 60 --MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
K++SGSS YKFGVL+KIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLSKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>gi|432844438|ref|XP_004065769.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
1 [Oryzias latipes]
gi|432844440|ref|XP_004065770.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
2 [Oryzias latipes]
Length = 287
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFKK+ALSTP VEKR A + K K SS S S+ S+ N+
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKRPAASDSGSHKKKKPKLDKEGSSGSKHSTESSNGNI 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+ SG YKFG LAKIV +MK RHQ+GD H L +DEILDET LD+ K K WL TE
Sbjct: 61 NIKASSG---YKFGCLAKIVNYMKTRHQNGDTHFLALDEILDETKLLDISMKQKHWLMTE 117
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ KA
Sbjct: 118 ALVNNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNAAKA 176
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI EYL+
Sbjct: 177 IK--ALGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFQKLWRSVPVDSIDEEKIDEYLK 233
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMN--RKKQFKKPRDNEHLADVLENY 286
KQGI +Q+ G KK + +KK + RK+QFK N HLA VLE+Y
Sbjct: 234 KQGISSMQETGPKKVMTVQKKKKQSGQRKRQFK--THNNHLAGVLEDY 279
>gi|308321341|gb|ADO27822.1| general transcription factor IIe subunit 2 [Ictalurus furcatus]
Length = 289
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 212/290 (73%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSS--SSLSSSLGSSN 58
MDPALLRER+LFKK+ALSTP VEKR A + K KK+K SS ++ SS GS N
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKRPASSEASGSSKKKKSKPDKDSSSKNNADSSNGSFN 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
K++SGSS YKFGVLA+IV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 ---LKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGLKQKQWLM 117
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD +G+GG+LLDDV E LP+
Sbjct: 118 TEALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQQGLGGVLLDDVEEGLPNAA 176
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++II+V RP DK+K++FYNDK ++DE+FQKLWRS+ VD +D++KI+EY
Sbjct: 177 KAIK--ALGDQIIFVARP-DKKKILFYNDKHCHFEVDEEFQKLWRSVPVDSIDDEKIEEY 233
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
L++QGI +QD G KK PV +K +K++FK N+HL VLE+Y
Sbjct: 234 LKRQGISSMQDTGPKKMTPVQKRKKSGTQKKRRFKT--HNDHLNGVLEDY 281
>gi|405960442|gb|EKC26367.1| Transcription initiation factor IIE subunit beta [Crassostrea
gigas]
Length = 285
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/291 (54%), Positives = 201/291 (69%), Gaps = 10/291 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRK-AETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDP+LL+ER F +A + P VEKRK + DE + +SSS + SSS
Sbjct: 1 MDPSLLKERKAFLDRAKAQPVVEKRKKGKDVSDEKPSKRPKSSSSSRPKNESSS----TP 56
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YKS SGSSQYKF +LAK+VK+MK RH +GD HPLTIDEILDETNQLDVG K+K WL T
Sbjct: 57 FDYKSSSGSSQYKFAILAKVVKYMKSRHLNGDTHPLTIDEILDETNQLDVGTKIKHWLIT 116
Query: 120 EALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
EAL NNPKI V+E G KY FKP F I+D+ L+KLLK HDL G+GG++ +DV ESLP+ E
Sbjct: 117 EALNNNPKIRVLENGQKYAFKPKFDIRDKTSLMKLLKNHDLHGLGGVMKEDVEESLPNAE 176
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
K+LK SL II + RP DK++++FYNDK + +DE+FQK+WR +SVDG+D+ KI+EY
Sbjct: 177 KSLK--SLGEHIITIVRPNDKKEILFYNDKYCRYKIDEEFQKMWRGVSVDGLDDKKIEEY 234
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
LEKQGI +QD G KK + K+ K+ + NEHL VLE+Y V
Sbjct: 235 LEKQGISSMQDVGLKK--VSQIKRKKGGGKRKTFKKHNEHLDGVLEDYSEV 283
>gi|47086579|ref|NP_997896.1| general transcription factor IIE, polypeptide 2, beta [Danio rerio]
gi|45501211|gb|AAH67173.1| General transcription factor IIE, polypeptide 2, beta [Danio rerio]
Length = 291
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/289 (56%), Positives = 211/289 (73%), Gaps = 9/289 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN-N 59
MDPALLRER+LFKK+ALSTP VEKR A + K KK+K SSSS ++ SN +
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKRPAASEASGSSKKKKSKPDKESSSSSKNNSDPSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLA+IV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNLKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGMKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ K
Sbjct: 121 EALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNAAK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVTRP-DKKKILFYNDKHCQFVVDEEFQKLWRSVPVDSIDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+KQGI +Q+ G KK P+ +K RK+++K N+HL VLE+Y
Sbjct: 237 KKQGISSMQETGPKKMTPIQKRKKPGTQRKRRYKT--HNDHLNGVLEDY 283
>gi|115914024|ref|XP_786458.2| PREDICTED: general transcription factor IIE subunit 2-like
[Strongylocentrotus purpuratus]
Length = 286
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/288 (52%), Positives = 213/288 (73%), Gaps = 9/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR--KAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MD ALLRER+ F K+A S P VEK+ KA +SK+ P K KK + S S +S G
Sbjct: 1 MDQALLREREAFLKRAKSQPVVEKKRPKAGSSKEPPPKKKKPGSGFSEPGSSRASTG--- 57
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ YK+ +GSS+YKFG+LAK+V+HMK RHQ GD +PL+I+EILDETNQ+DVG K K+WL
Sbjct: 58 -LNYKTHAGSSKYKFGILAKVVQHMKVRHQQGDSYPLSIEEILDETNQMDVGPKHKMWLI 116
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
EAL NNPK+ + +G KY+FKP F +++RK +++LLK+HD +G+GGI+++DV ESLPH +
Sbjct: 117 NEALPNNPKVSLEDG-KYLFKPAFNVRNRKEMVRLLKRHDQRGLGGIMMEDVMESLPHAK 175
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
++ L EII +T+P DK+KV++YND++ +L ++E+F++LW S +VD +D +KI+EY
Sbjct: 176 VGVEKLEKAGEIIVLTKP-DKKKVVYYNDRTFKLKIEEEFKELWNSTTVDSLDEEKIQEY 234
Query: 239 LEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
L+KQGI +QDHG KK P RKK NRK Q K N+H+++VL++Y
Sbjct: 235 LKKQGINSMQDHGPKKFNAPQRKKP-NRKGQRKFKTHNDHISEVLKDY 281
>gi|326918482|ref|XP_003205517.1| PREDICTED: general transcription factor IIE subunit 2-like
[Meleagris gallopavo]
Length = 290
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/291 (51%), Positives = 212/291 (72%), Gaps = 6/291 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSS-SSSLSSSLGSSNN 59
MDP+LLRER+LF+K ALSTP VEKR A +++ K KK K SSS SS ++ +
Sbjct: 1 MDPSLLRERELFRKHALSTPAVEKRPATSTESSSSKKKKVKVEQGGPSSSKQSSDHNNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMN 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEVI+G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E LP+ K
Sbjct: 121 EALVNNPKIEVIDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGLPNAHK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +D DK++EYL
Sbjct: 180 AIK--ALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSIDEDKVEEYL 236
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
++QGI +++ G +K + P ++K +K+ + N+HLA VL++Y V+
Sbjct: 237 KRQGISSMREAGPRK-IAPAQRKKPTSQKKRRFKTHNDHLAGVLKDYSDVT 286
>gi|410926263|ref|XP_003976598.1| PREDICTED: general transcription factor IIE subunit 2-like
[Takifugu rubripes]
Length = 285
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 201/287 (70%), Gaps = 11/287 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLRER+LFKK+ALSTP VEKR + K K SSS S + SS+N
Sbjct: 1 MDPSLLRERELFKKRALSTPAVEKRPTSSDSGSHKKKKPKVDKESSSGSKVGA-DSSSNF 59
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+ SG Y+FG LAKIV +MK RHQ+GD H LT+DEILDET LD+ K K WL E
Sbjct: 60 NIKTSSG---YRFGCLAKIVNYMKTRHQNGDTHFLTLDEILDETKLLDITLKQKQWLMNE 116
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ KA
Sbjct: 117 ALVNNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNSAKA 175
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EYL
Sbjct: 176 IK--ALGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFQKLWRSVPVDSIDEEKIEEYLN 232
Query: 241 KQGIRPIQDHGFKK-PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +Q+ G KK P+ +K+ + RK+QFK N HLA +LE+Y
Sbjct: 233 KQGISSMQETGPKKLPIQKRKKQGVQRKRQFKT--HNNHLAGILEDY 277
>gi|74147011|dbj|BAE27444.1| unnamed protein product [Mus musculus]
Length = 281
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/271 (54%), Positives = 197/271 (72%), Gaps = 7/271 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN- 59
MDP+LLR+R+LFKK+ALSTP VEKR + +KK K S S S +N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 60 --MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKK 268
YL++QGI +Q+ G KK R+K++ +K
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKSLLHRK 267
>gi|391339359|ref|XP_003744019.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Metaseiulus occidentalis]
Length = 280
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 13/288 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALL++R+ FKK+A++ P VE RK ET+ P KK S S +
Sbjct: 1 MDPALLKDREAFKKRAVAVPVVENRKRETT---PKDVKKRPAIPSKSFEPPPP---KDPF 54
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YKS+SG+ F VLAKIVK+MK RH +G+ H L++DEILDET+Q+DVG + K WL E
Sbjct: 55 RYKSVSGTGN-SFSVLAKIVKYMKTRHLEGETHELSLDEILDETSQMDVGTRQKTWLEQE 113
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL++NPKIEV E KY F+P + I+DR+ L KLL++HD +G+GGILLDD+RES+ H +
Sbjct: 114 ALKSNPKIEVTEDGKYKFRPPYNIRDRRSLFKLLEKHDQRGLGGILLDDIRESMAHVDVV 173
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK L++ ++YVTRP DK+ V+FYNDKS QL++DE QK+ RS++ DG+D+ KI+EYL+
Sbjct: 174 LK--KLEDSVLYVTRPTDKKVVLFYNDKSVQLNVDEYLQKVLRSVATDGVDDAKIEEYLK 231
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
K+GI +QD+G KK P+L ++ + +Q+K R NEHL DVL+ Y
Sbjct: 232 KRGIHSMQDNGSKKVNPILKRKRAAPKKARQYK--RHNEHLGDVLQEY 277
>gi|12861985|dbj|BAB32319.1| unnamed protein product [Mus musculus]
Length = 292
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/293 (51%), Positives = 204/293 (69%), Gaps = 7/293 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN- 59
MDP+LLR+R+LFKK+ALSTP VEKR + +KK K S S S +N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 60 --MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K L ++I+ V+RP DK+K++F+ND + + DE+FQ LWRS++VD MD ++I+E
Sbjct: 180 QKAVK--GLGDQILXVSRP-DKKKILFFNDNTLSVFWDEEFQXLWRSVAVDSMDEERIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKWASIQRRKEPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>gi|118089935|ref|XP_001233400.1| PREDICTED: general transcription factor IIE subunit 2 isoform 1
[Gallus gallus]
gi|363733352|ref|XP_003641238.1| PREDICTED: general transcription factor IIE subunit 2 isoform 2
[Gallus gallus]
gi|53136302|emb|CAG32502.1| hypothetical protein RCJMB04_27j8 [Gallus gallus]
Length = 290
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 210/291 (72%), Gaps = 6/291 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN-N 59
MDP+LLRER+LF+K ALSTP VEKR A +++ K KK K SS S SN +
Sbjct: 1 MDPSLLRERELFRKHALSTPAVEKRPAPSAEPSSSKKKKVKVEQGGPSSSKQSSDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMN 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E LP+ K
Sbjct: 121 EALVNNPKIEVVDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGLPNAHK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +D DK++EYL
Sbjct: 180 AIK--ALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSIDEDKVEEYL 236
Query: 240 EKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
++QGI +++ G +K + P ++K +K+ + N+HLA VL++Y V+
Sbjct: 237 KRQGISSMREAGPRK-IAPAQRKKPTSQKKRRFKTHNDHLAGVLKDYSDVT 286
>gi|348529474|ref|XP_003452238.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
3 [Oreochromis niloticus]
Length = 287
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/288 (55%), Positives = 204/288 (70%), Gaps = 11/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFKK+ALSTPTVEKR+A + K K SSSSS SS S+ +
Sbjct: 1 MDPALLRERELFKKRALSTPTVEKRQAASDSGSHKKKKPKVDKESSSSSKLSSDESNGSF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+ SG YKFG LAKIV +MK RHQ+GD H LT+DEILDET LD+ K WL E
Sbjct: 61 NIKASSG---YKFGCLAKIVNYMKTRHQNGDTHFLTLDEILDETKLLDIRMNQKQWLMNE 117
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E LP+ KA
Sbjct: 118 ALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGLPNSAKA 176
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EYL+
Sbjct: 177 IK--ALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSIDEEKIEEYLK 233
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +Q+ G KK P+ +K+ NRK+ FK N HLA +LE+Y
Sbjct: 234 KQGISSMQETGPKKVLPIQKRKKQAGNRKRHFKT--HNNHLAGLLEDY 279
>gi|348529472|ref|XP_003452237.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
2 [Oreochromis niloticus]
Length = 287
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/288 (55%), Positives = 204/288 (70%), Gaps = 11/288 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFKK+ALSTPTVEKR+A + K K SSSSS SS S+ +
Sbjct: 1 MDPALLRERELFKKRALSTPTVEKRQAASDSGSHKKKKPKVDKESSSSSKLSSDKSNGSF 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+ SG YKFG LAKIV +MK RHQ+GD H LT+DEILDET LD+ K WL E
Sbjct: 61 NIKASSG---YKFGCLAKIVNYMKTRHQNGDTHFLTLDEILDETKLLDIRMNQKQWLMNE 117
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E LP+ KA
Sbjct: 118 ALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGLPNSAKA 176
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EYL+
Sbjct: 177 IK--ALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSIDEEKIEEYLK 233
Query: 241 KQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
KQGI +Q+ G KK P+ +K+ NRK+ FK N HLA +LE+Y
Sbjct: 234 KQGISSMQETGPKKVLPIQKRKKQAGNRKRHFKT--HNNHLAGLLEDY 279
>gi|213514012|ref|NP_001133195.1| general transcription factor IIE, polypeptide 2-1 [Salmo salar]
gi|197632437|gb|ACH70942.1| general transcription factor IIE, polypeptide 2-1 [Salmo salar]
Length = 288
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/286 (55%), Positives = 203/286 (70%), Gaps = 6/286 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFKK+ALS PTVEKR A + K K +S S + S+ N
Sbjct: 1 MDPALLRERELFKKRALSQPTVEKRPAASESGGSKKKKSKADKEASGSKHGADT-SNGNF 59
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
K+++GSS YKFG LAKIV +MK RHQ GD H LT++EILDET LD+G K K WL TE
Sbjct: 60 NLKALTGSSGYKFGCLAKIVNYMKTRHQRGDTHHLTVEEILDETKLLDIGMKQKQWLMTE 119
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL +NPKIEV +G KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ KA
Sbjct: 120 ALASNPKIEVRDG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGLLLDDVEEGLPNSAKA 178
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK L ++II+VTRP DK+K++FYNDK Q +DE+F KLWRSI VD MD +KI++YL+
Sbjct: 179 LK--VLGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFTKLWRSIPVDSMDEEKIEDYLK 235
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+QGI +Q+ G KK VLP ++K +K+ + N+HLA VLE+Y
Sbjct: 236 RQGISSMQETGPKK-VLPIKRKKPGGQKKRRFKTHNDHLAGVLEDY 280
>gi|348529470|ref|XP_003452236.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
1 [Oreochromis niloticus]
Length = 297
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 206/290 (71%), Gaps = 16/290 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKA--ETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN 58
MDPALLRER+LFKK+ALSTPTVEKR+A ++ + K K K SSSSS S S GS N
Sbjct: 12 MDPALLRERELFKKRALSTPTVEKRQAASDSGSHKKKKPKVDKESSSSSKLSSESNGSFN 71
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ SS YKFG LAKIV +MK RHQ+GD H LT+DEILDET LD+ K WL
Sbjct: 72 ------IKASSGYKFGCLAKIVNYMKTRHQNGDTHFLTLDEILDETKLLDIRMNQKQWLM 125
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
EAL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E LP+
Sbjct: 126 NEALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGLPNSA 184
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EY
Sbjct: 185 KAIK--ALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSIDEEKIEEY 241
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
L+KQGI +Q+ G KK P+ +K+ NRK+ FK N HLA +LE+Y
Sbjct: 242 LKKQGISSMQETGPKKVLPIQKRKKQAGNRKRHFKT--HNNHLAGLLEDY 289
>gi|395739554|ref|XP_002819014.2| PREDICTED: transcription initiation factor IIE subunit beta [Pongo
abelii]
Length = 247
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 182/237 (76%), Gaps = 8/237 (3%)
Query: 56 SSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
++ + K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K
Sbjct: 14 ANGSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQ 73
Query: 116 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP
Sbjct: 74 WLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALP 132
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKI 235
+ +KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI
Sbjct: 133 NSQKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKI 189
Query: 236 KEYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+EYL++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 190 EEYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 244
>gi|291386100|ref|XP_002709584.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa [Oryctolagus cuniculus]
Length = 253
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/253 (54%), Positives = 189/253 (74%), Gaps = 10/253 (3%)
Query: 42 TSSSSSSSLSSSLGSSNNMAY--KSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDE 99
TS ++SS + +N ++ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++E
Sbjct: 4 TSKGFGENISSLRKNHSNGSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEE 63
Query: 100 ILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDL 159
ILDET LD+G K K WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL QHD
Sbjct: 64 ILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDG-KYAFKPKYDLKDKKALLRLLDQHDQ 122
Query: 160 KGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQ 219
+G+GGILL+D+ E LP+ +KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQ
Sbjct: 123 RGLGGILLEDIEEGLPNSQKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQ 179
Query: 220 KLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNE 277
KLWRS++VD MD +KI+EYL++QGI +Q+ G KK P+ +K +K++FK NE
Sbjct: 180 KLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNE 237
Query: 278 HLADVLENYEAVS 290
HLA VL++Y ++
Sbjct: 238 HLAGVLKDYSDIT 250
>gi|345315933|ref|XP_001520210.2| PREDICTED: general transcription factor IIE subunit 2-like, partial
[Ornithorhynchus anatinus]
Length = 298
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 178/233 (76%), Gaps = 8/233 (3%)
Query: 56 SSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
S+ + K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K
Sbjct: 2 SNGSFNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQ 61
Query: 116 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP
Sbjct: 62 WLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLP 120
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKI 235
+ +KA+K +L ++II+VTRP DK+K++F+NDKS Q +DE+FQKLWRSI VD MD +KI
Sbjct: 121 NAQKAIK--ALGDQIIFVTRP-DKKKILFFNDKSCQFTVDEEFQKLWRSIPVDSMDEEKI 177
Query: 236 KEYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+EYL++QGI +Q+ G KK P+ +K +K++FK N+HLA VL++Y
Sbjct: 178 EEYLKRQGISSMQESGPKKMAPIQRRKKPASQKKRRFKT--HNDHLAGVLQDY 228
>gi|443734210|gb|ELU18282.1| hypothetical protein CAPTEDRAFT_218991 [Capitella teleta]
Length = 282
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 195/288 (67%), Gaps = 13/288 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER FK +AL+ P VEKRKA A ++K+ S+ + S
Sbjct: 1 MDPALLRERANFKARALAMPAVEKRKA---------ADQSKSKSNKKARPSPKPREPKVF 51
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQYKF +LAKIVKHM+ +HQ GD++PL+++EILDETNQ D+G +++ WL+TE
Sbjct: 52 DYKNASGSSQYKFSILAKIVKHMRTKHQQGDNYPLSLEEILDETNQTDIGVQMRHWLNTE 111
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL+NNPKI V +K+ +KP F IK + L +LL++ ++G GGI +DDV ESLP+ +KA
Sbjct: 112 ALRNNPKITVTLDDKFEYKPKFTIKGKDSLRRLLEKRCMRGQGGITMDDVEESLPNAQKA 171
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+K +L ++++ V RP DK+ +++YNDKS +DE+ QKLWR+++V+G+D K++EYL
Sbjct: 172 VK--ALGDQLLQVIRPIDKKVILYYNDKSTNFVVDEELQKLWRAVAVEGVDEKKMEEYLR 229
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNR--KKQFKKPRDNEHLADVLENY 286
K G ++D + R + NR K+ K +DNEHL D+L +Y
Sbjct: 230 KHGHSSMKDSTVRSAAAIQRSRRANRKKAKKSVKTKDNEHLGDILVDY 277
>gi|119583851|gb|EAW63447.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_b [Homo sapiens]
Length = 220
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKL 221
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE + +
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEGWSAM 219
>gi|290462651|gb|ADD24373.1| Transcription initiation factor IIE subunit beta [Lepeophtheirus
salmonis]
Length = 215
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 153/208 (73%), Gaps = 1/208 (0%)
Query: 83 MKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVF 142
MK RH DG+D PLT++EILDETNQLDV ++ K WL TEAL+NNPKIEV G YIFK +
Sbjct: 1 MKTRHMDGEDRPLTLEEILDETNQLDVSSRTKNWLFTEALKNNPKIEVKNGT-YIFKAPY 59
Query: 143 KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV 202
+ +K L+KLLK HDLKG+GGI L+D+ ESLP C+K +++L +I+ ++R AD++KV
Sbjct: 60 NVTSKKTLIKLLKHHDLKGLGGIFLEDLAESLPKCDKIIRNLLDDEKIVIISRSADRKKV 119
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKK 262
+F D S + +DE+F+KLWRS++V+G D+ KI EYLEKQGIR + D+G KK R +
Sbjct: 120 VFLLDPSVDIQVDEEFRKLWRSVAVEGTDDAKIAEYLEKQGIRSMADNGIKKVFTNPRMR 179
Query: 263 NMNRKKQFKKPRDNEHLADVLENYEAVS 290
K++ + P+DNEH+ D+LE+Y ++
Sbjct: 180 KKAIKRKARAPKDNEHMKDILEDYNELT 207
>gi|395541847|ref|XP_003772848.1| PREDICTED: general transcription factor IIE subunit 2-like
[Sarcophilus harrisii]
Length = 245
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 162/213 (76%), Gaps = 8/213 (3%)
Query: 80 VKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFK 139
++ + RHQ GD HPLT++EILDET LD+G K K WL +EAL NNPKIEV++G KY FK
Sbjct: 35 IRKKQTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMSEALVNNPKIEVVDG-KYAFK 93
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +KA+K +L ++II+VTRP DK
Sbjct: 94 PKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQKAIK--ALGDQIIFVTRP-DK 150
Query: 200 RKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK--PVL 257
+K++F+NDKS Q +DE+FQKLWRSI+VD MD +KI+EYL++QGI +Q+ G KK P+
Sbjct: 151 KKILFFNDKSCQFTVDEEFQKLWRSITVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQ 210
Query: 258 PGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+K +K++FK NEHLA VL++Y ++
Sbjct: 211 RRKKPVSQKKRRFKT--HNEHLAGVLKDYSDIA 241
>gi|426359272|ref|XP_004046904.1| PREDICTED: transcription initiation factor IIE subunit beta
[Gorilla gorilla gorilla]
Length = 257
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 189/294 (64%), Gaps = 44/294 (14%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMK---------------------------------- 86
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
+AL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 87 LQALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 145
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 146 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 202
Query: 239 LEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 203 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 254
>gi|148703474|gb|EDL35421.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_b [Mus musculus]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Query: 83 MKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVF 142
MK RHQ GD HPLT++EILDET LD+G K K WL TEAL NNPKIEV++G KY FKP +
Sbjct: 1 MKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVVDG-KYAFKPKY 59
Query: 143 KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV 202
+KD+K LL+LL HD +G+GGILL+D+ E LP+ +KA+K +L ++I++V+RP DK+K+
Sbjct: 60 NLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNSQKAVK--ALGDQILFVSRP-DKKKI 116
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKK 262
+F+NDKS Q +DE+FQKLWRS++V+ MD +KI+EYL++QGI +Q+ G KK R+K
Sbjct: 117 LFFNDKSCQFSVDEEFQKLWRSVTVESMDEEKIEEYLKRQGISSMQESGPKKVASIQRRK 176
Query: 263 NMNRKKQFKKPRDNEHLADVLENYEAVS 290
+K+ + NEHLA VL++Y ++
Sbjct: 177 KPASQKKRRFKTHNEHLAGVLKDYSDIT 204
>gi|358339845|dbj|GAA47831.1| transcription initiation factor TFIIE subunit beta [Clonorchis
sinensis]
Length = 897
Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats.
Identities = 113/289 (39%), Positives = 180/289 (62%), Gaps = 17/289 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP LL+ER+ F K+A + P VEK + E + +T+SSS+S + S
Sbjct: 616 MDPNLLKEREAFLKRARALPVVEKPRMAPQPVEASPSPLRRTASSSASDMRSL------- 668
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
+ Q +F VL+KIVK+MKQRH + D HPL+++EIL+ET D WL E
Sbjct: 669 ---DLRPQLQGRFAVLSKIVKYMKQRHLERDTHPLSVEEILEETMLHDTPQSTIRWLEDE 725
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI V K++F+P + I+ R+ L +LLK+H+LKG+GG+ LDD+ E +P EK
Sbjct: 726 ALPNNPKIRVTPDRKFVFRPRYDIRTRQDLYQLLKRHELKGLGGVYLDDIAECIPDAEKV 785
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
+ + +I + P DK+ ++FYNDK+ L++DE F++ WR++SV+G+ KI+EYL+
Sbjct: 786 VN--GFGDHVIRIVTPHDKKTILFYNDKTFDLNIDEVFKQQWRAVSVEGIHESKIEEYLK 843
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKP---RDNEHLADVLENY 286
+ GI + G +K +P ++K +++ ++P +DNEH+ D++E++
Sbjct: 844 RNGISSMS--GDRKTFIPTQRKKPGQRRIVQRPVKLKDNEHVEDIIEDF 890
>gi|196476765|gb|ACG76247.1| general transcription factor IIE polypeptide 2 beta 34kDa-like
protein [Amblyomma americanum]
Length = 186
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 141/195 (72%), Gaps = 9/195 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALL+ERD FKK+A++TP VE RK + + A +++S +
Sbjct: 1 MDPALLKERDAFKKRAMATPVVEARKRD-------RDSSAGSAASQPKKKVKPPKPKDTY 53
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+ SGSSQY F VLAKIVKHMKQRH +GD HPLT++EILDETNQLD+G + K WL+TE
Sbjct: 54 NYKATSGSSQYNFSVLAKIVKHMKQRHLEGDTHPLTLEEILDETNQLDLGARQKHWLATE 113
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
ALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP+ E+
Sbjct: 114 ALQNNPKLQVTLDNKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLPNVERH 173
Query: 181 LKHLSLQNEIIYVTR 195
LK +L + IIYV R
Sbjct: 174 LK--ALGDSIIYVVR 186
>gi|256085803|ref|XP_002579101.1| hypothetical protein [Schistosoma mansoni]
gi|360044418|emb|CCD81966.1| hypothetical protein Smp_079910 [Schistosoma mansoni]
Length = 289
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 177/290 (61%), Gaps = 13/290 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
M+P+L++ER+ F K+A++ P VEK K+ S K S+S+ + +
Sbjct: 1 MNPSLIKEREAFLKRAMAIPVVEKPKSNYSGASEEKGAVTSVHRRGPPSVSAV----SEL 56
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
+ Q KF VL++IVK+MKQRH +GD HPL+++EIL+E D WL E
Sbjct: 57 RSLELKPQLQGKFAVLSRIVKYMKQRHLEGDTHPLSVEEILEEAVLHDTPPATVKWLEEE 116
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI V K++FKP + I+ RK L +LL++ +LKG+GGI LDD+ ES+P EK
Sbjct: 117 ALPNNPKIRVTTDAKFVFKPRYDIRTRKDLYQLLRRQELKGLGGIYLDDLTESVPDVEKI 176
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
L S + +I + P DK+ ++FYNDKS L++DE+F++ WRS+SV+G+ KI+EYL+
Sbjct: 177 LN--SFGDHVIRIVTPHDKKTILFYNDKSFDLNVDEEFKQQWRSVSVEGVHETKIEEYLK 234
Query: 241 KQGIRPIQ-DHGFKKPVL---PGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ GI + D PV PG+K+ +NR K DNEH+ +LE++
Sbjct: 235 RNGISSMSGDRKNFIPVQRKKPGQKRTINRSVHIK---DNEHVNGILEDF 281
>gi|56756723|gb|AAW26533.1| SJCHGC05808 protein [Schistosoma japonicum]
gi|226480622|emb|CAX73408.1| general transcription factor IIE, polypeptide 2 [Schistosoma
japonicum]
Length = 295
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 179/289 (61%), Gaps = 12/289 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
M+ +L++ER+ F K+A++ P +EK K+ S A +S +S S+ ++
Sbjct: 8 MNSSLIKEREAFLKRAMALPVIEKPKSNYSS-----ASDGNSSVTSIHRRGPSISPASVS 62
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
+ Q KF VL++IVK+MKQRH +GD HPL+++EIL+E D WL E
Sbjct: 63 RSFELKPQLQGKFAVLSRIVKYMKQRHLEGDTHPLSVEEILEEAVLHDTPPATIKWLEDE 122
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
AL NNPKI V K++F+P + I+ RK L +LL++ +LKG+GGI LDD+ ES+P EK
Sbjct: 123 ALPNNPKIRVTADAKFVFRPRYDIRTRKDLYQLLRRQELKGLGGIYLDDLTESVPDVEKI 182
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
L S + +I + P DK+ ++FYNDKS L++DE+F++ WRS+SV+G+ KI+EYL
Sbjct: 183 LN--SFGDHVIRIVTPHDKKTILFYNDKSFDLNVDEEFKQQWRSVSVEGVHETKIEEYLR 240
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKP---RDNEHLADVLENY 286
+ GI + G +K +P ++K +K+ +P +DNEH+ +LE++
Sbjct: 241 RNGISSMS--GDRKTFIPVQRKKPGQKRTINRPVHIKDNEHVNGILEDF 287
>gi|47213038|emb|CAF93447.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 151/205 (73%), Gaps = 7/205 (3%)
Query: 83 MKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVF 142
MK RHQ+GD H LT+DEILDET LD+ K K WL EAL NNPKIEV +G Y FKP +
Sbjct: 1 MKTRHQNGDTHFLTLDEILDETKLLDITLKQKQWLMNEALLNNPKIEVRDG-MYGFKPKY 59
Query: 143 KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV 202
+KD+K LL+LL +HD G+GG+LLDDV E LP+ KA+K +L ++II+VTRP DK+K+
Sbjct: 60 NLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNFAKAIK--ALGDQIIFVTRP-DKKKI 116
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK-PVLPGRK 261
+FYNDK Q +DE+FQKLWRSI VD +D +KI+EYL++QGI +Q+ G KK PV +K
Sbjct: 117 LFYNDKHCQFTVDEEFQKLWRSIPVDSIDEEKIEEYLKRQGISSMQETGPKKLPVQKRKK 176
Query: 262 KNMNRKKQFKKPRDNEHLADVLENY 286
+ + RK+ FK N HLA +LE+Y
Sbjct: 177 QGVQRKRHFKT--HNNHLAGMLEDY 199
>gi|198431857|ref|XP_002128543.1| PREDICTED: similar to general transcription factor IIE, polypeptide
2, beta 34kDa [Ciona intestinalis]
Length = 285
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 197/294 (67%), Gaps = 22/294 (7%)
Query: 1 MDPALLRERDLFKKKALSTPTVEK---RKAETSKDEPWKAKKA-KTSSSSSSSLSSSLGS 56
MD +LLR+R+ FK++A++ P VE+ RK + K+ +KK + SSS+SS SL S
Sbjct: 1 MDESLLRQREAFKQRAMTMPVVERSTVRKDTSRKESATTSKKLHRPSSSTSSKPIPSLYS 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETN-QLDVGNKVKI 115
++ +++KFG+LA++V HMK RHQ+G H LT+DE+L+E N + + K
Sbjct: 61 KPSV--------NKHKFGLLAQLVNHMKSRHQNGFTHALTLDEMLEECNMETTISTMHKH 112
Query: 116 WLSTEALQNNPKIEVI-EG--NKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRE 172
WL EAL NNPKI+VI EG ++ FKP + IKD+K LLKLL +HD +G+GGI ++D+ E
Sbjct: 113 WLLNEALVNNPKIQVISEGAATQFSFKPKYNIKDKKALLKLLDRHDQRGLGGIRMEDIEE 172
Query: 173 SLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDN 232
LP +K +K L ++I++VTRP DK++++FYNDKS + +DE+FQ+LWRS++VD +D+
Sbjct: 173 GLPRAKKCIKLLG--DKILFVTRP-DKKQIVFYNDKSCEFPVDEEFQQLWRSVTVDSIDD 229
Query: 233 DKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+KI+EYL GI +QD+ KKP + +K ++ K N+HL +LE+Y
Sbjct: 230 EKIEEYLNSHGITSMQDNAVKKPAV---QKRKKTNRKRKFKTHNDHLDGLLEDY 280
>gi|196002487|ref|XP_002111111.1| hypothetical protein TRIADDRAFT_54747 [Trichoplax adhaerens]
gi|190587062|gb|EDV27115.1| hypothetical protein TRIADDRAFT_54747 [Trichoplax adhaerens]
Length = 286
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 186/293 (63%), Gaps = 17/293 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAE-TSKDEPWKAKKAKTSSSSSSSLSSSLGSSNN 59
MDPAL++ER F + L+ P+VEKRK++ +K +P K+ K TS+ ++S S +
Sbjct: 1 MDPALVKERQKFINRQLAQPSVEKRKSQPVTKFKPEKSVKTFTSTPATSG-------SKS 53
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
YK +G S+ +FGVL KIV +MK+R+Q G++ PL++DE+LD T D+ + K WL+
Sbjct: 54 YNYKLTTGRSRSRFGVLNKIVNYMKERYQYGENSPLSLDELLDRTQTTDIESTDKDWLAK 113
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NN KI + +G K+ FKP F IK +K L + LK+ G+GG+ +DDV+ESLP+ E
Sbjct: 114 HALVNNEKISIQDG-KFKFKPKFDIKSKKQLYRFLKKRYENGLGGVYIDDVKESLPNSEN 172
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
+K+L + + +TRP DK++V+++ND + D+ E+F++LW S+SVD + D I+ YL
Sbjct: 173 IIKNLD--DSVTILTRPNDKKQVIYFNDIKNKFDVSEEFKQLWYSVSVDVSEID-IEVYL 229
Query: 240 EKQGIRPIQDHGFKKPVLPGRK--KNMNRKKQFKKPRDNEHL-ADVLENYEAV 289
+K GI ++D G K P RK + R +QFK N HL D L++Y +
Sbjct: 230 KKAGITVMEDSGRTKRKAPPRKNPRQSKRSRQFK--FTNTHLDKDTLKDYSDI 280
>gi|312085554|ref|XP_003144725.1| hypothetical protein LOAG_09149 [Loa loa]
gi|307760110|gb|EFO19344.1| hypothetical protein LOAG_09149 [Loa loa]
Length = 290
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 174/292 (59%), Gaps = 10/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKA----KKAKTSSSSSSSLSSSLGS 56
MDPALL+++ FK +A + ++ ++ + A KK + + S L+ SL
Sbjct: 1 MDPALLKQQAAFKARASQAIEMARKSTASTSHSTYDAEASRKKKRKVYNDSQLLAKSLSD 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
N+ + S S S+ FG +AKIV +MK+RH PL++ EIL+E D+G K ++W
Sbjct: 61 FNSKNFPSHSASNAVNFGTMAKIVDYMKKRHLSSQHWPLSLKEILEELQIYDLGKKSELW 120
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L E+L NP++ V E KY+FKP +KIK + LL LLK++ +G GGILL D+ E +P
Sbjct: 121 LQ-ESLPMNPRLIVDENGKYLFKPPYKIKGKNSLLALLKKYHTEGRGGILLSDLNECIPA 179
Query: 177 CEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDK 234
EK ++ LS N +I V +KRK V FYND ++DE F+ LWR+ SVD +D K
Sbjct: 180 AEKHIEALS--NLVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKK 237
Query: 235 IKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
I+EYL+K GI ++D G KK + K+ + R++ +K NEHL +VLE+Y
Sbjct: 238 IEEYLQKHGIDVMKDLGPKKVTVAPPKRKLPRRRANQKVH-NEHLTNVLEDY 288
>gi|444516844|gb|ELV11296.1| Glutathione reductase, mitochondrial [Tupaia chinensis]
Length = 524
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 154/237 (64%), Gaps = 44/237 (18%)
Query: 56 SSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
S+ + K++SGSS YKFGVLAKIV +MK
Sbjct: 327 SNGSFNLKALSGSSGYKFGVLAKIVNYMK------------------------------- 355
Query: 116 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
AL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP
Sbjct: 356 -----ALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLP 409
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKI 235
+ +KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI
Sbjct: 410 NSQKAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKI 466
Query: 236 KEYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+EYL++QGI +Q+ G KK P+ +K +K++FK NEHLA VL++Y V+
Sbjct: 467 EEYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDVA 521
>gi|402589647|gb|EJW83578.1| hypothetical protein WUBG_05512 [Wuchereria bancrofti]
Length = 289
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 174/291 (59%), Gaps = 10/291 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK---KAKTSSSSSSSLSSSLGSS 57
MDPALL+++ FK +A + +R ++ +++K K K + S S SS S
Sbjct: 2 MDPALLKQQAAFKARASQAIEMARRSTASTSHSTYESKSEEKRKVYNDSQLSTKSSSDFS 61
Query: 58 NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ A S S S+ FG +AKIV +MK+RH PL++ EIL+E D+G K ++WL
Sbjct: 62 SKNA-PSHSTSNALNFGTMAKIVDYMKKRHLSSQQWPLSLKEILEELQIYDLGKKSELWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
E+L NP++ V E KY+FKP +KIK + LL LLK++ ++G GGILL D+ E +P
Sbjct: 121 Q-ESLPMNPRLTVDENGKYLFKPPYKIKGKNSLLALLKKYHIEGRGGILLSDLNECIPAA 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKI 235
EK ++ LS N +I V +KRK V FYND ++DE F+ LWR+ SVD +D KI
Sbjct: 180 EKHIEALS--NVVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKKI 237
Query: 236 KEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+EYL+K GI ++D G KK K+ + R++ +K NEHL DVLE+Y
Sbjct: 238 EEYLQKHGIDVMKDLGPKKITFAPPKRKLPRRRANQKVH-NEHLTDVLEDY 287
>gi|170592070|ref|XP_001900792.1| Transcription initiation factor IIE, beta subunit [Brugia malayi]
gi|158591659|gb|EDP30263.1| Transcription initiation factor IIE, beta subunit, putative [Brugia
malayi]
Length = 291
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 170/292 (58%), Gaps = 10/292 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKA----KKAKTSSSSSSSLSSSLGS 56
MDPALL+++ FK +A + ++ ++ + A KK + + + S
Sbjct: 2 MDPALLKQQAAFKARASQAIEMARKSTASTSHSTYDAEASRKKKRKVYNDLQLSTKSSSD 61
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
++ S S S+ FG +AKIV +MK+RH PL++ EIL+E D+G K ++W
Sbjct: 62 FSSKNAPSHSTSNAVNFGTMAKIVDYMKKRHLSSQQWPLSLKEILEELQIYDLGKKSELW 121
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L E+L NP++ V E KY+FKP +KIK + LL LLK++ ++G GGILL D+ E +P
Sbjct: 122 LQ-ESLPTNPRLTVDENGKYLFKPPYKIKGKNSLLALLKKYHIEGRGGILLSDLNECIPA 180
Query: 177 CEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDK 234
EK ++ LS N +I V +KRK V FYND ++DE F+ LWR+ SVD +D K
Sbjct: 181 AEKHIEALS--NVVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKK 238
Query: 235 IKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
I+EYL+K GI ++D G KK K+ + R++ +K NEHL DVLE+Y
Sbjct: 239 IEEYLQKHGIDVMKDLGPKKTTFAPPKRKLPRRRANQKVH-NEHLTDVLEDY 289
>gi|156353006|ref|XP_001622871.1| predicted protein [Nematostella vectensis]
gi|156209497|gb|EDO30771.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 163/255 (63%), Gaps = 4/255 (1%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAK-KAKTSSSSSSSLSSSLGSSNN 59
MDP+LL++ FKK++ S PTVE +KA+ S +P +K +A L SS
Sbjct: 1 MDPSLLKDLQDFKKRSASQPTVEAKKAKPSSKKPSGSKSRAPPKHLPKELLQPKKASSPT 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
+ + S +F V+AKIV MK RH PL++DEILD+ N D+ K WL
Sbjct: 61 LDKNHLKLRSNKRFVVIAKIVDFMKNRHLTRQFEPLSLDEILDKINYTDINPNDKSWLEN 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL+ NPK+ +G K+ F P + I+D+K L+KLL++H+ +G GGILLDDVRESLP +K
Sbjct: 121 NALKENPKLAFKDG-KFAFSPKYHIRDKKQLVKLLEKHEERGHGGILLDDVRESLPDADK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
++++S + I+++TR DK+ ++FYN+K ++++DE+FQK WR++SVDG+ I++YL
Sbjct: 180 IVRNVS--SRIMFITRSCDKKVLLFYNNKGYKMEIDEEFQKHWRAVSVDGIGEADIEKYL 237
Query: 240 EKQGIRPIQDHGFKK 254
K GI +QD G K+
Sbjct: 238 VKAGISTMQDTGVKR 252
>gi|393909215|gb|EJD75359.1| hypothetical protein, variant [Loa loa]
Length = 260
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 154/251 (61%), Gaps = 6/251 (2%)
Query: 38 KKAKTSSSSSSSLSSSLGSSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTI 97
KK + + S L+ SL N+ + S S S+ FG +AKIV +MK+RH PL++
Sbjct: 12 KKKRKVYNDSQLLAKSLSDFNSKNFPSHSASNAVNFGTMAKIVDYMKKRHLSSQHWPLSL 71
Query: 98 DEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
EIL+E D+G K ++WL E+L NP++ V E KY+FKP +KIK + LL LLK++
Sbjct: 72 KEILEELQIYDLGKKSELWLQ-ESLPMNPRLIVDENGKYLFKPPYKIKGKNSLLALLKKY 130
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQLDLD 215
+G GGILL D+ E +P EK ++ LS N +I V +KRK V FYND ++D
Sbjct: 131 HTEGRGGILLSDLNECIPAAEKHIEALS--NLVIDVQTMINKRKDHVYFYNDPDTDYEVD 188
Query: 216 EDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRD 275
E F+ LWR+ SVD +D KI+EYL+K GI ++D G KK + K+ + R++ +K
Sbjct: 189 EKFKSLWRNASVDHLDEKKIEEYLQKHGIDVMKDLGPKKVTVAPPKRKLPRRRANQKVH- 247
Query: 276 NEHLADVLENY 286
NEHL +VLE+Y
Sbjct: 248 NEHLTNVLEDY 258
>gi|90085403|dbj|BAE91442.1| unnamed protein product [Macaca fascicularis]
Length = 196
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIG 163
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+G
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLG 164
>gi|324510806|gb|ADY44513.1| General transcription factor IIE subunit 2 [Ascaris suum]
Length = 290
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 171/295 (57%), Gaps = 13/295 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEP----WKAKKAKTSSSSSSSLSSSLGS 56
MDPALL+++ FK++A + + + S + A+ ++ + + S
Sbjct: 1 MDPALLKQQAAFKQRAARAAEMTSKSSAPSTSTSSHTTYDAEASRKKKKKPTDPQLAAKS 60
Query: 57 SNNMAYKSM-SGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
++ YK+ S +S FG +AKIV +MK+RH PL++ EIL+E D+ K +
Sbjct: 61 LSDFNYKTAQSSASAANFGTMAKIVDYMKKRHLTAQQWPLSLSEILEELQVYDINKKSEA 120
Query: 116 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
WL ++L NP++ V E K++FKP +K+K + LL LLK+H G GGILL D+ E +P
Sbjct: 121 WLQ-QSLPLNPRLSVDENGKFLFKPPYKVKGKNSLLALLKKHYQDGKGGILLSDLNECIP 179
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGMDND 233
+K ++ +L N +I V A+KRK FYND +D++F+ LWR+ SVD +D
Sbjct: 180 AADKHIE--ALGNVVIDVPTQANKRKDRAYFYNDPDTDYFIDDEFKGLWRNASVDHLDEK 237
Query: 234 KIKEYLEKQGIRPIQDHGFKKPVL-PGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KI+EYL+K GI ++D K+ ++ P ++K M R+ K NEHL++VLE+Y+
Sbjct: 238 KIEEYLQKHGIDTMRDLAPKRKIVGPPKRKAMKRRANQK--VHNEHLSNVLEDYD 290
>gi|17534359|ref|NP_496466.1| Protein F54D5.11 [Caenorhabditis elegans]
gi|1638825|emb|CAA70049.1| TFIIE-beta protein [Caenorhabditis elegans]
gi|13548367|emb|CAA91336.2| Protein F54D5.11 [Caenorhabditis elegans]
Length = 289
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 171/296 (57%), Gaps = 16/296 (5%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR-----KAETSKDEPWKAKKAKTSSSSSSSLSSSLG 55
MDP LLR+R F+K A +T V+ + + T+ K K SS + +LS L
Sbjct: 1 MDPELLRQRTAFQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQNLSK-LP 59
Query: 56 SSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
NN + + S+ F +AKIV +MK+RH + PLT+ EILDE D+ +
Sbjct: 60 DFNNSVSNANALSNATNFSTMAKIVDYMKKRHLNNQQWPLTLQEILDELQIFDLSKRSLA 119
Query: 116 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
+L EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E +
Sbjct: 120 FLQ-EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVA 177
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMDN 232
+ + L+ +S +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD +D
Sbjct: 178 NYDALLQQVS--SEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHLDE 235
Query: 233 DKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + P ++K R+ F + NEH+ VLE+YE
Sbjct: 236 KKIEEYLQKKGLDAMKDLTPKVRMQAPLKRKAAKRR--FNQKVQNEHMDGVLEDYE 289
>gi|449673855|ref|XP_004208048.1| PREDICTED: general transcription factor IIE subunit 2-like [Hydra
magnipapillata]
Length = 293
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 161/250 (64%), Gaps = 9/250 (3%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSK---DEPWKAKKAKTSSSSSSSLSSSLGSS 57
MDP+L+++ + FKK++L+ P VE +K + + K KK + L S +
Sbjct: 1 MDPSLMKDLNAFKKRSLNQPAVESKKQVLNTAIIESVRKPKKRRRPELPPQLLQQSKKQA 60
Query: 58 NNMAYKSMSGS---SQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVK 114
N A+ + + ++ +F +L+ IV +K R+Q+ + PLT+DE+LD T D+ + K
Sbjct: 61 ANQAFNYKTHTQIRTKSRFSILSSIVDLVKNRYQNKEFEPLTLDELLDLTKNTDIKSYDK 120
Query: 115 IWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 174
WL+ E+L+NNPKI + + +KY FKP + ++D+K L++LL++HD G+GG+LLDDVRE L
Sbjct: 121 EWLADESLKNNPKI-LFKDDKYSFKPKYALRDKKSLIRLLEKHDQSGLGGVLLDDVREGL 179
Query: 175 PHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDK 234
P+ ++ +K S+ ++I++VTR DK+ ++FY D S + +DE+ QK WRS++V+G+
Sbjct: 180 PNADEIVK--SISDKIMFVTRSNDKKAILFYYDSSYAVHVDEENQKHWRSVAVEGLAEPD 237
Query: 235 IKEYLEKQGI 244
I++YL GI
Sbjct: 238 IEKYLSNCGI 247
>gi|341888893|gb|EGT44828.1| hypothetical protein CAEBREN_22626 [Caenorhabditis brenneri]
Length = 289
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 172/294 (58%), Gaps = 12/294 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVE-KRKAETSKDEPWKAKKAKTSSSSSSSLS---SSLGS 56
MDP LLR++ F+K A +T V+ K A ++ + ++ AK S+ LS S L
Sbjct: 1 MDPELLRQQKAFQKHAATTVAVQNKPSAASNSHTTYSSEAAKAKKKKSAGLSQNLSKLPD 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+N S + S+ F +AKIV +MK+RH PLT+ EILDE D+ + +
Sbjct: 61 FDNFTSNSNALSNATNFSTMAKIVDYMKKRHLSQQQWPLTLQEILDELQIYDLQKRSLAF 120
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L EAL NNP++ ++EG+K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + +
Sbjct: 121 LQ-EALPNNPRL-IMEGDKFAFRPPYKIKGKTSLVAVARKHHQDGKGGILVSDLAECVAN 178
Query: 177 CEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMDND 233
+ L+ +S ++I V +K+K V+F+ND +L++ F+ LWR +SVD +D
Sbjct: 179 YDAMLQQVS--GDVIVVPTMVNKKKDRVVFFNDNEYTFPELEDSFKTLWRQVSVDHLDEK 236
Query: 234 KIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + +K+ +++ +K + NEH+ VLE+YE
Sbjct: 237 KIEEYLQKKGLDAMKDLTPKVRMQAPQKRKAAKRRHNQKVQ-NEHMDGVLEDYE 289
>gi|308509462|ref|XP_003116914.1| hypothetical protein CRE_01733 [Caenorhabditis remanei]
gi|308241828|gb|EFO85780.1| hypothetical protein CRE_01733 [Caenorhabditis remanei]
Length = 289
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 169/294 (57%), Gaps = 12/294 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPW----KAKKAKTSSSSSSSLSSSLGS 56
MDP LLR++ F+K A +T V+ + + +S AK K SS S S L
Sbjct: 1 MDPELLRQQKAFQKHAATTVAVQNKPSASSNSHTTYSSEAAKAKKKKSSGPSQNLSKLPD 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+N S + S+ F +AKIV +MK+RH + PLT+ E+LDE D+ + +
Sbjct: 61 FDNFTSNSNALSNATNFSTMAKIVDYMKKRHLNQQQWPLTLQEMLDELQIYDLSKRSLAF 120
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
L EAL NNP++ ++E +K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + +
Sbjct: 121 LH-EALPNNPRL-IMENDKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVAN 178
Query: 177 CEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMDND 233
+ L+ ++ ++I V +K+K V+FYNDK +L++DF+ LWR++SVD +D
Sbjct: 179 YDALLQQVAA--DVIVVPTQVNKKKDRVVFYNDKDFTFPELEDDFKALWRNVSVDHLDEK 236
Query: 234 KIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + +K K++ + NEH+ VLE+YE
Sbjct: 237 KIEEYLQKKGLDAMKDLT-PKVRMQAPQKRKAAKRRLNQKVQNEHMDGVLEDYE 289
>gi|268531926|ref|XP_002631091.1| Hypothetical protein CBG02864 [Caenorhabditis briggsae]
Length = 289
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 168/294 (57%), Gaps = 12/294 (4%)
Query: 1 MDPALLRERDLFKKKALSTPTVE-KRKAETSKDEPWKAKKAKTSSSSSSSLS---SSLGS 56
MDP LLR++ F+K A +T V+ K A S + ++ AK +S S S L
Sbjct: 1 MDPELLRQQKAFQKHAATTVAVQNKPSAAASSHTTYSSEAAKAKKKKASGPSQNLSKLPD 60
Query: 57 SNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW 116
+N A S + S+ F +AKIV +MK+RH PLT+ E+LDE D+G K I
Sbjct: 61 FDNFASNSNAISNATNFSTMAKIVDYMKKRHLSQQQWPLTLKEVLDELQLYDLG-KRNIA 119
Query: 117 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
EAL NNP + NK+ F+P +KIK + L+ + ++H G GGIL+ D+ E + +
Sbjct: 120 FLQEALPNNPHGDPT-MNKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVAN 178
Query: 177 CEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMDND 233
+ L+ ++ +II V +K+K V+FYNDK +L++DF+ LWR++SVD +D
Sbjct: 179 YDALLQQVAA--DIIVVPTQVNKKKDRVVFYNDKDFTFPELEDDFKALWRNVSVDHLDEK 236
Query: 234 KIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + K+ +++ +K + N+H+ VLE+YE
Sbjct: 237 KIEEYLQKKGLDAMKDLTPKVRMQAPLKRKAAKRRHNQKVQ-NDHMEGVLEDYE 289
>gi|313235827|emb|CBY19811.1| unnamed protein product [Oikopleura dioica]
Length = 262
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 143/254 (56%), Gaps = 31/254 (12%)
Query: 5 LLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNMAYKS 64
LL++R+ F K+A + P +E + A K + K K +
Sbjct: 4 LLKQREAFLKRAQNVPVIENKSAPAPKRARLETSKKKVVPVKN----------------- 46
Query: 65 MSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLD-VGNKVKIWLSTEALQ 123
F ++ KIV HMK RH + PL++D++L+E N V N ++ L +AL
Sbjct: 47 --------FHLIHKIVTHMKNRHLQNELLPLSLDDVLEECNSTTTVSNAARLGLE-DALP 97
Query: 124 NNPKIEVIEGN--KYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
NPK+ I G+ KY ++P + I+D+K L+ L++H +G+GG+ + V+ESLP +K
Sbjct: 98 KNPKLRQIPGDVVKYCYRPSIEGIRDKKSFLQFLERHYHEGLGGVTKEMVQESLPKADKI 157
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
LK+ S + I TRP DK+ V+F+ND+S ++++DE FQKLWRSI+V+ +D DKI EYL
Sbjct: 158 LKYHSEKKNIHVHTRP-DKKTVIFFNDRSLEIEMDETFQKLWRSITVESVDEDKIAEYLA 216
Query: 241 KQGIRPIQDHGFKK 254
QGI D G +K
Sbjct: 217 GQGITFADDPGIRK 230
>gi|389614513|dbj|BAM20304.1| transcription factor IIEbeta, partial [Papilio xuthus]
Length = 107
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 82/95 (86%)
Query: 193 VTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGF 252
+TRP DK+K++FYNDK+A+LD+DE+F KLWR+ +VD MD+ KI+EYLEKQGI+ +QDHG
Sbjct: 1 ITRPTDKKKILFYNDKTAKLDVDEEFVKLWRATAVDAMDDAKIEEYLEKQGIKSMQDHGP 60
Query: 253 KKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYE 287
+KP+ P RKK +++QFKKPRDNEHLADVLE YE
Sbjct: 61 RKPIAPKRKKASQKRRQFKKPRDNEHLADVLETYE 95
>gi|225714664|gb|ACO13178.1| Transcription initiation factor IIE subunit beta [Lepeophtheirus
salmonis]
Length = 162
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 100/163 (61%), Gaps = 15/163 (9%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MD ALLRER+ FK +A++ P VE +K + + D +KAK + + LS S S +M
Sbjct: 1 MDRALLREREAFKNRAMAVPVVENKKLKKN-DGSAAERKAKKIAETGGGLSKSAKSKFDM 59
Query: 61 -------------AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQL 107
+ SG+S +F VLAKIV+HMK RH DG+DHPLT++EILDETNQL
Sbjct: 60 QQYRAASAASGASPFGGYSGASSTQFSVLAKIVRHMKTRHMDGEDHPLTLEEILDETNQL 119
Query: 108 DVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGL 150
DV ++ K WL TEAL+NNPKIE G YIFK + + +K
Sbjct: 120 DVSSRTKNWLFTEALKNNPKIEAKNGT-YIFKAPYNVTSKKNF 161
>gi|239799420|dbj|BAH70631.1| ACYPI003970 [Acyrthosiphon pisum]
Length = 118
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 83/117 (70%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDPALLRER+LFK KA + P VEKR E + ++ +K+K S S SS+
Sbjct: 1 MDPALLRERELFKLKASAIPVVEKRLREDNSNKDDFKRKSKPLPSMPRPPSPPNTSSSLN 60
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+YKS SSQYKFGVL KIVK+++ RHQDGDDHPLT+DE+LDETNQLDVG KVK L
Sbjct: 61 SYKSYGQSSQYKFGVLTKIVKYIRARHQDGDDHPLTLDELLDETNQLDVGTKVKTVL 117
>gi|149057902|gb|EDM09145.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057903|gb|EDM09146.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057904|gb|EDM09147.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057905|gb|EDM09148.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 125
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM 60
MDP+LLR+R+LFKK+ALSTP VEKR + KK SS S NN
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSKKKKAKVEHGGSSGSKQNSDHNNG 60
Query: 61 AY--KSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
++ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEA 121
TE
Sbjct: 121 TEV 123
>gi|253722791|pdb|1D8J|A Chain A, Solution Structure Of The Central Core Domain Of Tfiie
Beta
gi|253722792|pdb|1D8K|A Chain A, Solution Structure Of The Central Core Domain Of Tfiie
Beta
Length = 81
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Query: 64 SMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQ 123
++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL TEAL
Sbjct: 1 ALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLMTEALV 60
Query: 124 NNPKIEVIEGNKYIFKPVFKIK 145
NNPKIEVI+G KY FKP + ++
Sbjct: 61 NNPKIEVIDG-KYAFKPKYNVR 81
>gi|340370164|ref|XP_003383616.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Amphimedon queenslandica]
Length = 309
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 162/303 (53%), Gaps = 25/303 (8%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKR--KAETSKDE-------PWKAKKAKTSSSSSSSLS 51
+DP+LL++R+ FKK++ +TP VEK+ KA+ + D K K ++ S + L
Sbjct: 4 IDPSLLKDREAFKKRSRATPVVEKKVSKAKVTADSRPSASKPKKKKKASQFSRPKPNILH 63
Query: 52 SSLGSSNNMAYKSMSG-SSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVG 110
+ G+S+++ + G + +L +V MK+R+ PL+IDEIL E + ++
Sbjct: 64 T--GTSDSIKEAAKHGHRGKNPARILKAVVDMMKERYLTKVYDPLSIDEILKEIDLEELH 121
Query: 111 NKVKIWLSTEALQNNPKIEVI-EGNKYIFKPVF--KIKDRKGLLKLLKQHDLKGIGGILL 167
+++K L E L+ N KI E +++IF P +++ + LL L+ + KG+GG+ +
Sbjct: 122 SEIKQRLY-EELRRNRKIRYYSEADRFIFLPSLGHQVRSKTQLLAFLQDRESKGMGGVSI 180
Query: 168 DDVRESLPHCEKALKHLSLQNEIIYVTRPADKRK---VMFYNDKSAQLDLDEDFQKLWRS 224
D++E++P EK L+ L + I+ + ++ K V+FYN+ + +DE WR
Sbjct: 181 TDLKEAIPQTEKVLRKL---EKDIFRLKCGERDKNEEVVFYNNHDYDITVDESIVSQWRQ 237
Query: 225 ISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHL-ADVL 283
+SVDG I++YLE G+ +Q K+ ++K + +Q K N HL D+L
Sbjct: 238 VSVDGQSERDIEKYLENVGLGAMQGETRKRKAPTQQRKTSKKSRQTKIL--NTHLETDLL 295
Query: 284 ENY 286
+ Y
Sbjct: 296 KEY 298
>gi|119583852|gb|EAW63448.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_c [Homo sapiens]
Length = 194
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 185 SLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGI 244
+L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL++QGI
Sbjct: 87 ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQGI 145
Query: 245 RPIQDHGFKK--PVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+Q+ G KK P+ +K +K++FK NEHLA VL++Y ++
Sbjct: 146 SSMQESGPKKVAPIQRRKKPASQKKRRFKT--HNEHLAGVLKDYSDIT 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKT--SSSSSSSLSSSLGSSN 58
MDP+LLRER+LFKK+ALSTP VEKR A + KK SS S +S S+
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMK 84
+ K++SGSS YKFGVLAKIV +MK
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMK 86
>gi|149057906|gb|EDM09149.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 115
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 185 SLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGI 244
+L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL++QGI
Sbjct: 8 ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQGI 66
Query: 245 RPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS 290
+Q+ G KK R+K +K+ + NEHLA VL++Y ++
Sbjct: 67 SSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 112
>gi|349803255|gb|AEQ17100.1| putative general transcription factor polypeptide beta subunit
[Pipa carvalhoi]
Length = 102
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 82/117 (70%), Gaps = 17/117 (14%)
Query: 170 VRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDG 229
+ E LP+ +KA+K +L ++I++VTRP DKRK FYNDKS Q +DE+FQKLWRS+ VD
Sbjct: 1 IEEGLPNAQKAIK--ALGDQIVFVTRP-DKRKP-FYNDKSCQFTVDEEFQKLWRSVPVDS 56
Query: 230 MDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
MD++KI+EYL++QGI +Q+ G KK ++P K + N+HLA VL++Y
Sbjct: 57 MDDEKIEEYLKRQGISSMQESGPKK-IIPRFKTH------------NDHLAGVLKDY 100
>gi|384498007|gb|EIE88498.1| hypothetical protein RO3G_13209 [Rhizopus delemar RA 99-880]
Length = 206
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 84 KQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIE-GNKYIFKPVF 142
++R+Q +HP ++ I T ++D+ +W E L NN KIE N + +KP +
Sbjct: 5 ERRNQLDSNHPQSVVSIASRT-KVDISKNPALW---EKLVNNEKIEYDSVNNMFSYKPTY 60
Query: 143 KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV 202
+IK ++ LL LL + GG+ D+++S A++ L+ + I+ V +V
Sbjct: 61 QIKSKEDLLSLLISK--RKEGGMDYKDLKDSYSKLSSAVEELAGEGVILVVRNKDGNPRV 118
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQ--DHGFKKPVLPGR 260
+FYND +D DF+K+W IS+ D + + LE+ G++ ++ + V P R
Sbjct: 119 LFYNDAQYNTPIDADFKKMWSEISIP--DETDLPKALEEAGLKTMEVFEKKITAEVKPKR 176
Query: 261 KKNMNRKKQFKKPRDNEHLADV 282
K +++ + N HL+ +
Sbjct: 177 SKTRHKRIKIT----NTHLSHI 194
>gi|349605756|gb|AEQ00884.1| Transcription initiation factor IIE subunit beta-like protein,
partial [Equus caballus]
Length = 77
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Query: 217 DFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK--PVLPGRKKNMNRKKQFKKPR 274
+FQKLWRS++VD MD +KI+EYL++QGI +Q+ G KK P+ +K +K++FK
Sbjct: 1 EFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKT-- 58
Query: 275 DNEHLADVLENYEAVS 290
NEHLA VL++Y ++
Sbjct: 59 HNEHLAGVLKDYSDIA 74
>gi|320163025|gb|EFW39924.1| hypothetical protein CAOG_00449 [Capsaspora owczarzaki ATCC 30864]
Length = 337
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 78 KIVKHMKQRHQDGDDHPLT---IDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGN 134
+IV H++ RH DD+ T +DE+L ++ V + ++ L+ N I ++G
Sbjct: 127 RIVTHLRDRHLARDDNAATEFSLDELLARVSE-RVLSPAELDDMRHRLEGNILINHVDG- 184
Query: 135 KYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVT 194
K+ +KP + + + LL+LL+ + ++G+GGI ++ + + L N I YV
Sbjct: 185 KFRYKPKYAVGSKDELLELLRSYYMQGLGGIKQSELLQCYREAADDVMQLQADNRI-YVL 243
Query: 195 RPA-DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 227
+P ++FYND ++D+DE+F+ LW I +
Sbjct: 244 KPTKGTEMILFYNDPRLRVDVDEEFKDLWSKIQL 277
>gi|281209241|gb|EFA83414.1| transcription initiation factor IIE2 [Polysphondylium pallidum
PN500]
Length = 259
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 79 IVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIF 138
IV H+K + +T +E+ D T GN+ I + L+ N K+E + +
Sbjct: 67 IVNHLKSL----EGSYITFEELRDSTGHEIYGNQELI----DQLKTNIKVEFLNDTTLCY 118
Query: 139 KPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPAD 198
KP+ +KD +G+L+LL +H GI+L D++ES E+ +K L EI V
Sbjct: 119 KPLHNVKDDRGILELLSKHPY----GIMLSDLKESYLAVEQDVKKLKDSKEIYAVRNSES 174
Query: 199 KRKVMFYNDKSAQLDLDEDFQKLWRSI 225
+++FY+D+ ++ D LW+S+
Sbjct: 175 NSEMLFYSDEKYRIPCSSDLVDLWKSV 201
>gi|115390036|ref|XP_001212523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194919|gb|EAU36619.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E+
Sbjct: 130 EKVQYDPSGANGEGT-FAFRPPHNIRTAEQLLQKLQAQSTGA--GMSVRELREGWPNVEE 186
Query: 180 ALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L + +++ VTR D K+++ ND S DE+F+++W I V D +KE
Sbjct: 187 TINRLEKEGKLL-VTRNKKDDHAKMVWANDPSLNQHFDEEFRQIWEKIKVP--DPQAVKE 243
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
LEK GI P K V+ R K +K+ KKPR N H+ +L +Y
Sbjct: 244 ELEKAGITPTN----KNKVVKARPK--VEQKKVKKPRRSGKTTNTHMMGILRDY 291
>gi|119472950|ref|XP_001258451.1| transcription initiation factor TFIIE, beta subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119406603|gb|EAW16554.1| transcription initiation factor TFIIE, beta subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 290
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ G+ + ++RE P+ E+ + L + +++ VTR
Sbjct: 139 FAFRPPHNIRTAEQLLQKLQSQTT--AAGMSVRELREGWPNVEETINRLEKEGKLL-VTR 195
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S DE+F+++W I V D +KE LEK GI P K
Sbjct: 196 NKKDDHAKMVWANDPSLVQHFDEEFRQIWAKIKVP--DQQAVKEELEKAGITPTS----K 249
Query: 254 KPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
++ R K +K+ KKPR N H+ VL +Y
Sbjct: 250 NKIVKVRPK--VEQKKVKKPRRSGKTTNTHMMGVLRDY 285
>gi|326427981|gb|EGD73551.1| hypothetical protein PTSG_05258 [Salpingoeca sp. ATCC 50818]
Length = 249
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 131 IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEI 190
+E F+P + +K+++ LL LK+ D KG+GG+ +D++ S + L ++ +
Sbjct: 66 LEDGYVAFQPTYDVKNKQELLDKLKEFDQKGLGGMRVDELDGSYDGVLLDVDELKAKDLV 125
Query: 191 IYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDH 250
+ D+ V+F+ D + ++ +D+ K WR SV G + ++K+YL ++P+Q
Sbjct: 126 YCIHNKTDRVDVLFFKDPALRVHIDKAIVKRWRMESVQGKTDKELKQYLINAQMKPLQVE 185
Query: 251 GF-KKPV 256
KKPV
Sbjct: 186 KIPKKPV 192
>gi|70992683|ref|XP_751190.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
fumigatus Af293]
gi|66848823|gb|EAL89152.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus fumigatus Af293]
gi|159130355|gb|EDP55468.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus fumigatus A1163]
Length = 290
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ G+ + ++RE P+ E+ + L + +++ VTR
Sbjct: 139 FAFRPPHNIRTAEQLLQKLQSQTT--AAGMSVRELREGWPNVEETINRLEKEGKLL-VTR 195
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S DE+F+++W I V D +KE LEK GI P K
Sbjct: 196 NKKDDHAKMVWANDPSLVQHFDEEFRQIWAKIKVP--DQQAVKEELEKAGITPTS----K 249
Query: 254 KPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
++ R K +K+ KKPR N H+ VL +Y
Sbjct: 250 NKIVKVRPK--VEQKKVKKPRRSGKTTNTHMMGVLRDY 285
>gi|145240985|ref|XP_001393139.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
niger CBS 513.88]
gi|134077667|emb|CAK96780.1| unnamed protein product [Aspergillus niger]
gi|350630111|gb|EHA18484.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
niger ATCC 1015]
Length = 292
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E
Sbjct: 126 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKLQSQSTGA--GMSVRELREGWPNVED 182
Query: 180 ALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L + +++ VTR D K+++ ND S D +F+++W I V D +KE
Sbjct: 183 TINKLEKEGKLL-VTRNKKDDHAKMVWANDPSLIQHFDPEFRQIWEKIKVP--DQQAVKE 239
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
LEK GI P K V+ R K N+K KKPR N H+ VL +Y
Sbjct: 240 ELEKAGITPTN----KNKVVKARPKIENKK--VKKPRRSGKTTNTHMMGVLRDY 287
>gi|330797975|ref|XP_003287032.1| hypothetical protein DICPUDRAFT_31794 [Dictyostelium purpureum]
gi|325082995|gb|EGC36460.1| hypothetical protein DICPUDRAFT_31794 [Dictyostelium purpureum]
Length = 282
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKL 153
P EI++ TN + ++ I E L+NNPK+ +K+ +KP+F +K+ K +L+L
Sbjct: 91 PADTKEIMNNTNH-SIEDRPDIL---ELLRNNPKVIDHGDDKFSYKPLFNVKNIKEILEL 146
Query: 154 LKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV--MFYNDKSAQ 211
+ +H GGIL D+ ES E +K L + + +Y + +D + +F ND+ +
Sbjct: 147 VNKHP----GGILASDIAESYNQAEADVKKLK-ETKQVYAIKSSDNTHIDMLFPNDEKYR 201
Query: 212 LDLDEDFQKLWRSISV 227
+ + ++ +W+SI V
Sbjct: 202 VPVSQELIDMWKSIKV 217
>gi|358371312|dbj|GAA87920.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
kawachii IFO 4308]
Length = 294
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E
Sbjct: 128 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKLQSQSTGA--GMSVRELREGWPNVED 184
Query: 180 ALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L + +++ VTR D K+++ ND S D +F+++W I V D +KE
Sbjct: 185 TINKLEKEGKLL-VTRNKKDDHAKMVWANDPSLIQHFDPEFRQIWEKIKVP--DQQAVKE 241
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
LEK GI P K V+ R K N+K KKPR N H+ VL +Y
Sbjct: 242 ELEKAGILPTN----KNKVVKARPKIENKK--VKKPRRSGKTTNTHMMGVLRDY 289
>gi|67538656|ref|XP_663102.1| hypothetical protein AN5498.2 [Aspergillus nidulans FGSC A4]
gi|40743468|gb|EAA62658.1| hypothetical protein AN5498.2 [Aspergillus nidulans FGSC A4]
gi|259485052|tpe|CBF81795.1| TPA: transcription initiation factor TFIIE, beta subunit, putative
(AFU_orthologue; AFUA_6G13130) [Aspergillus nidulans
FGSC A4]
Length = 293
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 42/272 (15%)
Query: 40 AKTSSSSSSSLSSSLGSSNNMAYK-----------SMSGSSQYKFGVLAKIVKHMKQRHQ 88
A TS S++ + + G SN K + +G+ + + ++HMK +
Sbjct: 34 ASTSQVPSATSTPTPGGSNEQKKKRHDVDIVYSQPANTGTGKDIMTQVVFAIEHMKSK-- 91
Query: 89 DGDDHPLTIDEILD-------ETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPV 141
PLT ++I+ +Q V I E +Q +P EG + F+P
Sbjct: 92 ---GVPLTFNDIVSYLSLQHRANDQGYVQALRSILQMHEKVQYDPSGANGEGT-FSFRPP 147
Query: 142 FKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPA--DK 199
I+ + LL+ L Q G+G + + ++RE P+ E + L + +++ VTR D
Sbjct: 148 HNIRTAEQLLQKL-QSQSTGVG-MSVRELREGWPNVEDTINKLEKEGKLL-VTRNKKDDH 204
Query: 200 RKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPG 259
K+++ ND S D++F+++W I + + +KE LEK GI P + KP
Sbjct: 205 AKMVWANDPSLIQHFDDEFKQIWEKIKIP--EQQVVKEELEKAGITPTNKNKVIKP---- 258
Query: 260 RKKNMNRKKQFKKPR-----DNEHLADVLENY 286
R K ++K KKPR N H+ VL +Y
Sbjct: 259 RPKVEHKK--VKKPRRSGKTTNTHMMGVLRDY 288
>gi|328866280|gb|EGG14665.1| transcription initiation factor IIE2 [Dictyostelium fasciculatum]
Length = 272
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 64 SMSGSSQYKFG-VLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEAL 122
S++G + G ++ +V H+ R +G P T++E++ T ++ + L + L
Sbjct: 52 SVAGEKKTPTGRIIFDVVIHL--RSLEG--RPATLEELMISTGHKEI---IDSQLVQDEL 104
Query: 123 QNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALK 182
+ N K+E ++ FKP++++K + ++ LLK+ + +GI L+ + ES +K
Sbjct: 105 KQNEKVEFLDSTTVRFKPLYRVKTPEEIVDLLKEENPRGIP---LNKLTESYAKVGDDVK 161
Query: 183 HLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 227
L EI + +++FYND+ ++ + ++ K+W++I +
Sbjct: 162 KLKESKEIYTIKNTELNTEILFYNDEKYRIPVSDELIKMWKNIPI 206
>gi|406867371|gb|EKD20409.1| transcription initiation factor IIE subunit beta [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 300
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 1 MDPALLRERDLFKKKALST-PTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLG---- 55
M L +++ FK A+S P + +K + + P A S++S++S + S
Sbjct: 1 MSSYLEKQQAQFKSSAISAAPQIATKKRKLTAPTPESAPSPAPSNTSTTSKADSKAPKKK 60
Query: 56 SSNNMAYK--SMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKV 113
S N+ Y + +G F + ++ +K++ D T +IL+ +Q+ +++
Sbjct: 61 ESANVVYSQPATTGYGTDAFTQVTYVIDFLKKK-----DEAKTFKDILEYLSQMHADDRM 115
Query: 114 KIWLST-----EALQNNP----KIEVIEGNKYIFKPVFKIKDRKGLLK-LLKQHDLKGIG 163
K ++ + +Q P K + K++ +P+ ++ + LL L ++ D +G+
Sbjct: 116 KQTIARVLKKHDRVQWFPDPSLKTQTWYSGKFMHRPIINVRSKGDLLAHLQRKADAQGVS 175
Query: 164 GILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLD-LDEDFQKLW 222
+ D+++ P CE+A+ L +++I+ D M ++D D +FQ +W
Sbjct: 176 ---VKDLKDGWPDCEEAIDELEREHKILVTRTKKDNHARMVWSDDPTLFHATDPEFQVMW 232
Query: 223 RSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK-PVLPGRKKNMNRKKQFKKPRDNEHLAD 281
I + + D++ L++ G +P + K+ P K+ R + N H++
Sbjct: 233 HKIELPSV--DELVRKLQEAGQKPASEDPAKRIKAAPKLKEKKKRAARSGGKTTNLHMSH 290
Query: 282 VLENY 286
+L++Y
Sbjct: 291 LLKDY 295
>gi|169770299|ref|XP_001819619.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
oryzae RIB40]
gi|238487304|ref|XP_002374890.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus flavus NRRL3357]
gi|83767478|dbj|BAE57617.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699769|gb|EED56108.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus flavus NRRL3357]
gi|391867465|gb|EIT76711.1| transcription initiation factor IIE, beta subunit [Aspergillus
oryzae 3.042]
Length = 291
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ G+ + ++RE P+ E + L + +++ VTR
Sbjct: 140 FSFRPPHNIRTAEQLLQKLQSQST--AAGMSVRELREGWPNVEDTINQLEKEGKLL-VTR 196
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S D++F+++W I V D +KE LEK GI P K
Sbjct: 197 NKKDDHAKMVWANDPSLIQHFDDEFRQIWEKIRVP--DQQAVKEELEKAGITPTN----K 250
Query: 254 KPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
V R K ++K KKPR N H+ VL +Y
Sbjct: 251 NKVTKARPKIEHKK--VKKPRRSGKTTNTHMMGVLRDY 286
>gi|121700200|ref|XP_001268365.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396507|gb|EAW06939.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 294
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ G+ + ++RE P+ E + L + +++ VTR
Sbjct: 143 FAFRPPHNIRTAEQLLQKLQAQST--AAGMSVRELREGWPNVEDTINRLEKEGKLL-VTR 199
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S DE+F+++W I + D +KE LEK GI P K
Sbjct: 200 NKKDDHAKMVWANDPSLVQHFDEEFRQIWEKIKIP--DQQTVKEELEKAGITPTN----K 253
Query: 254 KPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
V+ R K ++K KK R N H+ VL +Y
Sbjct: 254 NKVVKARPKIEHKK--VKKTRRSGKTTNTHMMGVLRDY 289
>gi|402220167|gb|EJU00239.1| hypothetical protein DACRYDRAFT_23212 [Dacryopinax sp. DJM-731 SS1]
Length = 337
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 122 LQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL 181
LQ++ I + N Y +KP F I++++ LL + +H +G GG+ + +RES P A+
Sbjct: 158 LQHDRVIHDTKTNTYSYKPDFNIRNKEQLLTEITRHYKRG-GGMSVKVIRESWPSAIPAI 216
Query: 182 KHLSLQNEIIYVTRPA--DKRKVMFYND---KSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
+ L+ + ++I VTR A + +++F+N+ + +D++FQ++W S V D D I
Sbjct: 217 EELAARGDVI-VTRTAKDNTPRIVFFNEVPLEQGGGQIDKEFQEIWNSQKVP--DEDIIM 273
Query: 237 EYLEKQG 243
L+ G
Sbjct: 274 SDLQSFG 280
>gi|19075379|ref|NP_587879.1| transcription factor TFIIE beta subunit, TFIIEB, Tfa2
[Schizosaccharomyces pombe 972h-]
gi|20140557|sp|P79011.2|T2EB_SCHPO RecName: Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|3451309|emb|CAA20446.1| transcription factor TFIIE beta subunit, TFIIEB, Tfa2
[Schizosaccharomyces pombe]
Length = 285
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 99 EILDETNQLDVGNKVKIWLST-------EALQNNPKIEVIEGNK-YIFKPVFKIKDRKGL 150
E L E N+ ++ +LST L+ N +I E N+ + FKP+ I+ GL
Sbjct: 88 EYLKERNEPKTAEEIASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPLHNIRSGAGL 147
Query: 151 LKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKS 209
L L K G+ + ++R+ P+ L+ L Q E++ + TR K+++ NDKS
Sbjct: 148 LAYLDSQ--KTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKMVWRNDKS 205
Query: 210 AQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPG--RKKNMNRK 267
+D++FQ++W I + + + L K G++P V P ++ N+
Sbjct: 206 CDCHVDKEFQQVWHEIPIPPTLD--LASELGKYGLKPTS-------VDPSTVKRAGHNQT 256
Query: 268 KQFKKPR------DNEHLADVLENYEAV 289
+ KKP+ N HL ++L +Y ++
Sbjct: 257 PKQKKPKTRRGKITNTHL-NILRDYSSM 283
>gi|154298525|ref|XP_001549685.1| hypothetical protein BC1G_11447 [Botryotinia fuckeliana B05.10]
gi|347440641|emb|CCD33562.1| similar to transcription initiation factor IIE subunit beta
[Botryotinia fuckeliana]
Length = 297
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 24/243 (9%)
Query: 58 NNMAYK--SMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
N+ Y + +G F + +++ +K++ D P T EIL+ +Q+ V + K
Sbjct: 60 TNVVYSQPASTGYGTEAFTQVTYVIEFLKKK-----DEPKTFQEILEYLSQVHV-EQSKK 113
Query: 116 WLSTEALQN--------NPKIEVIEGNKYIFK--PVFKIKDRKGLLKLLKQHDLKGIGGI 165
L + L+ +PK++V + FK P+ ++++ LL L+ + G+
Sbjct: 114 QLIAQILRRHDRVQWIADPKLKVQAWDSGTFKHRPIIGVRNKGALLSYLQ--NKPDAQGV 171
Query: 166 LLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRS 224
+ D+++ P CE A+ L + +I+ T+ + ++++ ND + ++ +FQ +W
Sbjct: 172 SVKDLKDGWPDCEDAINELEKEYKILVTRTKKDNHARMIWINDPTLIHPVESEFQVMWHR 231
Query: 225 ISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-DNEHLADVL 283
+ +D D +++ LE G +P + K+ + + K RK K R N H+A +L
Sbjct: 232 TELPSVD-DLVRKLLE-NGQKPASEDPSKRVKVAPKAKEKKRKAPRKGGRTTNTHMAHLL 289
Query: 284 ENY 286
+Y
Sbjct: 290 NDY 292
>gi|56377913|dbj|BAD74159.1| general transcription factor spTFIIE beta subunit
[Schizosaccharomyces pombe]
Length = 285
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 99 EILDETNQLDVGNKVKIWLST-------EALQNNPKIEVIEGNK-YIFKPVFKIKDRKGL 150
E L E N+ ++ +LST L+ N +I E N+ + FKP+ I+ GL
Sbjct: 88 EYLKERNEPKTAEEIASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPLHNIRSGAGL 147
Query: 151 LKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKS 209
L L K G+ + ++R+ P+ L+ L Q E++ + TR K+++ NDKS
Sbjct: 148 LAYLDSQ--KTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKMVWRNDKS 205
Query: 210 AQLDLDEDFQKLWRSISV 227
+D++FQ++W I +
Sbjct: 206 CDCHVDKEFQQVWHEIPI 223
>gi|322711044|gb|EFZ02618.1| Transcription initiation factor IIE, beta subunit, putative
[Metarhizium anisopliae ARSEF 23]
Length = 302
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 76 LAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKI------- 128
+A V+++K++ + P +I EI+D + + K L TE L+ +P++
Sbjct: 83 MAFAVEYLKKKGE-----PKSITEIIDHLSLRGYSEEHKREL-TEGLRGHPRVDWKPDAS 136
Query: 129 ---EVIEGNKYIFKPV-FKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHL 184
+ + Y ++P+ +KD LL L++ G+ + D+++ P CE+ L L
Sbjct: 137 LSEQTWKTGMYSYRPIILNVKDGTSLLAYLQRKT--DASGVSVKDLKDGWPDCEETLASL 194
Query: 185 SLQNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQG 243
Q++++ V T+ + + ++ +D S + +FQ +W + + +D+ + L G
Sbjct: 195 EKQHKVLVVRTKKDNFPRYVWADDPSLHNSVQPEFQVMWHRVPIPSVDD--MHRKLVNVG 252
Query: 244 IRPIQDHGFKKPVLPGRKKNMNRKKQFKKP--RDNEHLADVLENYEAV 289
+P + K G K + +K+ K+ N H+A +L+++ +
Sbjct: 253 QKPTSEDPLKIQQAAGNKPKVQKKRASKRTGKATNVHMAHLLQDFSHI 300
>gi|156042207|ref|XP_001587661.1| hypothetical protein SS1G_11654 [Sclerotinia sclerotiorum 1980]
gi|154696037|gb|EDN95775.1| hypothetical protein SS1G_11654 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 297
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 115/244 (47%), Gaps = 24/244 (9%)
Query: 57 SNNMAYK--SMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVK 114
++N+ Y + +G F + +++ +K++ D P T EIL +Q V + K
Sbjct: 59 ASNVVYSQPAATGYGTEAFTQVTYVIEFLKKK-----DEPKTFQEILGYLSQAHV-EQSK 112
Query: 115 IWLSTEALQNNPKIEVI----------EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGG 164
L + L+ + +++ I + + +P+ ++++ LL L+ + G
Sbjct: 113 KQLIAQILRRHDRVQWIADPKLKTQTWDSGTFKHRPIIGVRNKGALLSYLQ--NKPDAQG 170
Query: 165 ILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWR 223
+ + D+++ P CE+A+ L +++I+ T+ + ++++ ND S ++ +FQ +W
Sbjct: 171 VSVKDLKDGWPDCEEAINELEAEHKILVTRTKKDNHARMVWINDPSLIHPVESEFQVMWH 230
Query: 224 SISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-DNEHLADV 282
+ +D D +++ LE G +P + K+ + K RK K R N H+ +
Sbjct: 231 RTELPSVD-DLVRKLLEA-GQKPASEDPSKRIKATPKPKEKKRKAPRKGGRTTNTHMQHL 288
Query: 283 LENY 286
L +Y
Sbjct: 289 LHDY 292
>gi|1834288|dbj|BAA19123.1| S.pombe TFA2 homolog [Schizosaccharomyces pombe]
Length = 224
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 99 EILDETNQLDVGNKVKIWLST-------EALQNNPKIEVIEGNK-YIFKPVFKIKDRKGL 150
E L E N+ ++ +LST L+ N +I E N+ + FKP+ I+ GL
Sbjct: 27 EYLKERNEPKTAEEIASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPLHNIRSGAGL 86
Query: 151 LKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKS 209
L L K G+ + ++R+ P+ L+ L Q E++ + TR K+++ NDKS
Sbjct: 87 LAYLDSQ--KTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKMVWRNDKS 144
Query: 210 AQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPG--RKKNMNRK 267
+D++FQ++W I + + + L K G++P V P ++ N+
Sbjct: 145 CDCHVDKEFQQVWHEIPIPPTLD--LASELGKYGLKPTS-------VDPSTVKRAGHNQT 195
Query: 268 KQFKKPR------DNEHLADVLENYEAV 289
+ KKP+ N HL ++L +Y ++
Sbjct: 196 PKQKKPKTRRGKITNTHL-NILRDYSSM 222
>gi|213401367|ref|XP_002171456.1| transcription initiation factor IIE subunit beta
[Schizosaccharomyces japonicus yFS275]
gi|211999503|gb|EEB05163.1| transcription initiation factor IIE subunit beta
[Schizosaccharomyces japonicus yFS275]
Length = 285
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 133/300 (44%), Gaps = 50/300 (16%)
Query: 12 FKKKALSTPTVEKRKAETSKDEPWKAKKAK-TSSSSSSSLSSSLG----SSNNMAYK--S 64
FKKK + P K + E ++ A T S++SS + +LG S N+ Y +
Sbjct: 11 FKKKVANQPIYAKPQIERPTAAYVASRSATPTDVSATSSPAPALGKKKRSKTNLVYSQPA 70
Query: 65 MSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST----- 119
SG + L V+++K+R++ P T +EI +LST
Sbjct: 71 DSGVGTHYLSQLHYAVEYLKERNE-----PKTAEEIAS-------------YLSTPLTPM 112
Query: 120 --EALQNNPKIEV-IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 176
+ L+ N +I + FKP+ I+ GLL L LK G+ + ++++ P+
Sbjct: 113 LLQLLKKNDRILYDARHETFTFKPLHNIRSSAGLLAYLD--SLKVHAGMSVKELKDGWPN 170
Query: 177 CEKALKHLSLQNEIIYVTRPADK-RKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKI 235
L+ L + E++ + D K+++ ND+S +D++F+ +W I + + +
Sbjct: 171 VAAELEELEKRGEVLLLRTKKDAVPKMVWRNDRSCDCHVDDEFKSVWHEIPIPPTLD--L 228
Query: 236 KEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR------DNEHLADVLENYEAV 289
L K G++P P +K M+ KQ KKP+ N HL ++L +Y ++
Sbjct: 229 ATELGKYGLKPTA----VDPSTVKKKTLMHASKQ-KKPKTRRGKITNTHL-NILRDYSSM 282
>gi|66807005|ref|XP_637225.1| transcription initiation factor IIE2 [Dictyostelium discoideum AX4]
gi|74853087|sp|Q54KJ8.1|T2EB_DICDI RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|60465642|gb|EAL63721.1| transcription initiation factor IIE2 [Dictyostelium discoideum AX4]
Length = 276
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGN-KYIFKPVFKIKDRKGLLK 152
P EI+ TN + + +K +I E L+NN KI + GN ++ FKP F ++ ++ +L
Sbjct: 86 PADTKEIMHSTNHM-IDDKPEIL---ELLRNNEKI-IDHGNDRFSFKPKFNVRTQRDILD 140
Query: 153 LLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQL 212
LL + GGIL+ ++ ES + E +K L +I + ++F ND+ ++
Sbjct: 141 LLPNYP----GGILVSELAESYNNAESDVKKLKETKQIFAIKAAESACDIIFPNDERLRV 196
Query: 213 DLDEDFQKLWRSI 225
L + +W+SI
Sbjct: 197 PLSSELVDMWKSI 209
>gi|302791872|ref|XP_002977702.1| hypothetical protein SELMODRAFT_107428 [Selaginella moellendorffii]
gi|302795614|ref|XP_002979570.1| hypothetical protein SELMODRAFT_419190 [Selaginella moellendorffii]
gi|300152818|gb|EFJ19459.1| hypothetical protein SELMODRAFT_419190 [Selaginella moellendorffii]
gi|300154405|gb|EFJ21040.1| hypothetical protein SELMODRAFT_107428 [Selaginella moellendorffii]
Length = 300
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 102 DETNQ---LDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHD 158
DE N +DV N +++ E L+NN K+ +G ++ +K +K++ LL L+
Sbjct: 109 DEINNRCFVDVANNKEVF---ETLKNNVKVS-FDGQRFSYKAKHGLKNKAELLVQLR--- 161
Query: 159 LKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDF 218
K G+ L ++R++ P ++ L EI + + ++++ +D ++ +DED
Sbjct: 162 -KCTEGMALSELRDAYPGIVSDVQELKASGEIRVMCNSDSQEEILYPDDPRMKIKVDEDI 220
Query: 219 QKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK 254
KL RSI + D ++ L+K G+RP+ + ++
Sbjct: 221 AKLCRSIELP-TDFVLVERELQKNGVRPMTNSVLRR 255
>gi|303311145|ref|XP_003065584.1| Transcription initiation factor IIE, beta subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240105246|gb|EER23439.1| Transcription initiation factor IIE, beta subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 292
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 80 VKHMKQRHQDGDDHPLTIDEILDETNQLDVG-NKVKIWLSTEALQNNPKIEV-IEGNK-- 135
++HMK + D PLT +I + G ++ I LQ++ K++ +G+K
Sbjct: 84 IEHMKSK-----DVPLTFSDIQSYLSLHRQGHDQAYIHALRRILQSHDKVDYDPQGSKGE 138
Query: 136 --YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
+ F+P I+ LL+ L+ G+ + ++RE P+ + + L + +++ V
Sbjct: 139 GTFRFRPPHNIRSADQLLQKLQSQPT--AQGMSVRELREGWPNIVETINKLEKEGKLL-V 195
Query: 194 TRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
TR D ++++ ND + D +F+++W + + D + E LEK GI P H
Sbjct: 196 TRNKKDDHPRMVWANDPTLIHQFDSEFRQIWEKVKIP--DQQTVAEELEKAGITPTSKH- 252
Query: 252 FKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
KPV +++ +K+ KKPR N H+A +L +Y
Sbjct: 253 --KPV---KQRPKIEQKKVKKPRRSGKTTNTHMAGILRDY 287
>gi|119194593|ref|XP_001247900.1| hypothetical protein CIMG_01671 [Coccidioides immitis RS]
gi|392862861|gb|EAS36465.2| transcription initiation factor TFIIE [Coccidioides immitis RS]
Length = 292
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 80 VKHMKQRHQDGDDHPLTIDEILDETNQLDVG-NKVKIWLSTEALQNNPKIEV-IEGNK-- 135
++HMK + D PLT +I + G ++ I LQ++ K++ +G+K
Sbjct: 84 IEHMKSK-----DVPLTFSDIQSYLSLHRQGHDQAYIHALRRILQSHDKVDYDPQGSKGE 138
Query: 136 --YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
+ F+P I+ LL+ L+ G+ + ++RE P+ + + L + +++ V
Sbjct: 139 GTFRFRPPHNIRSADQLLQKLQSQPT--AQGMSVRELREGWPNIVETINKLEKEGKLL-V 195
Query: 194 TRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
TR D ++++ ND + D +F+++W + + D + E LEK GI P H
Sbjct: 196 TRNKKDDHPRMVWANDPTLIHQFDSEFRQIWEKVKIP--DQQTVAEELEKAGITPTSKH- 252
Query: 252 FKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
KPV +++ +K+ KKPR N H+A +L +Y
Sbjct: 253 --KPV---KQRPKIEQKKVKKPRRSGKTTNTHMAGILRDY 287
>gi|425768668|gb|EKV07186.1| Transcription initiation factor TFIIE, beta subunit, putative
[Penicillium digitatum PHI26]
gi|425775962|gb|EKV14202.1| Transcription initiation factor TFIIE, beta subunit, putative
[Penicillium digitatum Pd1]
Length = 293
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I++ + LLK L+ K G+ + ++RE P E+ + + + +++ VTR
Sbjct: 142 FRFRPPHNIRNSEQLLKHLQAQ--KTAAGMSVRELREGWPTVEEEINQMETEGKLL-VTR 198
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S D++F+++W I V D + +KE L+K GI P +
Sbjct: 199 NKKDDHPKMVWPNDPSLIEHFDDEFKQIWDKIKVP--DANIVKEELDKFGITPTNKNKVL 256
Query: 254 KP--VLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
P + P +K KKPR N H+ +L +Y
Sbjct: 257 GPRVIAPSKKS--------KKPRRSGKTTNTHMTSILRDY 288
>gi|388499682|gb|AFK37907.1| unknown [Medicago truncatula]
Length = 282
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
+L+ NPK+E +G ++ +K + +K++ LL+L++++ G+ + D++++ P+ +
Sbjct: 114 SLRKNPKVEY-DGQRFSYKAKYGLKEKSELLQLIRRYP----EGLAVFDLKDAYPNVMED 168
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKEY 238
L+ L +I ++ + + + ND A + +D+D ++L+RSI + D +D I++
Sbjct: 169 LQALKAAGQIWLLSNFDSQDDITYPNDPKANIKVDDDLKQLFRSIELPRDMID---IEKD 225
Query: 239 LEKQGIRPIQDHGFKKP------VLPGRKKNMNRKKQFKKPR--DNEHLADVLEN 285
L+K G++P + ++ V K N +K + K N HL ++ +N
Sbjct: 226 LQKNGMKPATNTAKRRSAAQIDGVSSKPKSNFRKKNEITKRTKLTNAHLPELFQN 280
>gi|320039400|gb|EFW21334.1| transcription initiation factor TFIIE, beta subunit [Coccidioides
posadasii str. Silveira]
Length = 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 80 VKHMKQRHQDGDDHPLTIDEILDETNQLDVG-NKVKIWLSTEALQNNPKIEV-IEGNK-- 135
++HMK + D PLT +I + G ++ I LQ++ K++ +G+K
Sbjct: 84 IEHMKSK-----DVPLTFSDIQSYLSLHRQGHDQAYIHALRRILQSHDKVDYDPQGSKGE 138
Query: 136 --YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
+ F+P I+ LL+ L+ G+ + ++RE P+ + + L + +++ V
Sbjct: 139 GTFRFRPPHNIRSADQLLQKLQSQPTAQ--GMSVRELREGWPNIVETINKLEKEGKLL-V 195
Query: 194 TRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
TR D ++++ ND + D +F+++W + + D + E LEK GI P H
Sbjct: 196 TRNKKDDHPRMVWANDPTLIHQFDAEFRQIWEKVKIP--DQQTVAEELEKAGITPTSKH- 252
Query: 252 FKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
KPV +++ +K+ KKPR N H+A +L +Y
Sbjct: 253 --KPV---KQRPKIEQKKVKKPRRSGKTTNTHMAGILRDY 287
>gi|315053963|ref|XP_003176356.1| transcription initiation factor IIE subunit beta [Arthroderma
gypseum CBS 118893]
gi|311338202|gb|EFQ97404.1| transcription initiation factor IIE subunit beta [Arthroderma
gypseum CBS 118893]
Length = 291
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 87 HQDGDDHPLTIDEILDETNQLDVGNKV-------KIWLSTEALQNNPKIEVIEGNKYIFK 139
H G D PL +I + G+ +I S + +Q +P EG + F+
Sbjct: 85 HMKGKDVPLMFSDIESYLSLSRQGHDTGYIHALRRILQSHDKVQYDPAGANGEGT-FQFR 143
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P I+ LL+ L+ K G+ + D+RE P + + L + +++ D
Sbjct: 144 PPHNIRSADQLLQHLQSQ--KTAQGMSVRDLREGWPTIVETINKLEKEGKLLVTRNKKDN 201
Query: 200 R-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLP 258
K+++ ND S D +F ++W + + D+ + E LEK GI P H K
Sbjct: 202 HPKMIWANDPSLSQKFDPEFCQIWEKVKIP--DHQTVMEELEKAGITPTSKHKAAKTRPK 259
Query: 259 GRKKNMNRKKQFKKPRDNEHLADVLENY 286
+K + + ++ K N H+A +L +Y
Sbjct: 260 VEQKKVKKARRSGK-TTNTHMAGILRDY 286
>gi|167517026|ref|XP_001742854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779478|gb|EDQ93092.1| predicted protein [Monosiga brevicollis MX1]
Length = 222
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL+ + ++EG + +K + + D GL + L++ G+GG+ LD++ +
Sbjct: 69 EALEQPNRSVIVEGQRISYKAPYDVHDLDGLRRELRKFWESGLGGMRLDEIASCYKGAKA 128
Query: 180 ALKHLSLQNEIIYVTR---PADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
++L + E+ V R PA V+F+ + S +L +D + WR+I + D+D I+
Sbjct: 129 DAQNLIARGEVYQVMRKQHPA--VPVLFHRESSLELPMDPELLSRWRTIPMKP-DHD-IQ 184
Query: 237 EYLEKQGIRPIQDH 250
+L++ I P++ H
Sbjct: 185 TFLKQYKIEPVRVH 198
>gi|449017337|dbj|BAM80739.1| similar to transcription initiation factor TFIIE beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 259
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 98/179 (54%), Gaps = 19/179 (10%)
Query: 76 LAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNK 135
L K+++++K+ + P++ +EI +E Q+ + ++W++ L NP++ + +
Sbjct: 37 LHKVLRYLKK-----ELRPVSPEEI-EEALQIRLQRDSELWVN---LVGNPRVLLESDGR 87
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQN--EIIYV 193
+ ++ + +++R LL LLK + GI + ++++S + ++ L+ + +I
Sbjct: 88 WRWRSKYYLRNRDDLLNLLK----TSVEGIPVSELQDSYRDALRDIRELAYERNPPLILA 143
Query: 194 TRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDH 250
RP++ K ++F ND + + + E +KLW+SI + D+ + +YL ++G++ +H
Sbjct: 144 FRPSEHTKEVILFPNDPTLYVRISEQVRKLWQSIPIP--DSSVVYDYLLQRGLKQGSNH 200
>gi|320590910|gb|EFX03351.1| transcription initiation factor beta [Grosmannia clavigera kw1407]
Length = 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 136 YIFKPVF-KIKDRKGLLK-LLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
Y PV +KDR LL+ L ++ D +G+ + D+++ P CE L L ++ I+ V
Sbjct: 164 YEHLPVIPNVKDRTSLLQHLQRRTDAQGVN---VKDLKDGWPDCEATLTALEKEHRILVV 220
Query: 194 -TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPI-QDHG 251
T+ + ++++ +D S +++ DFQ LW V +D+ I L G +P +D
Sbjct: 221 RTKKDNHPRMVWLDDPSLCHEVEPDFQALWHRAEVPSIDD--IVRKLAAAGQKPTSEDPR 278
Query: 252 FKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ P KK R ++ N H+ +L++Y
Sbjct: 279 LRDIAAPKEKKQKKRAQRRTGKSTNTHMEHLLKDY 313
>gi|125531807|gb|EAY78372.1| hypothetical protein OsI_33458 [Oryza sativa Indica Group]
Length = 279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 88/154 (57%), Gaps = 15/154 (9%)
Query: 99 EILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
E ++ET +D+ GNK ++L+NNPK+ +G ++ +K +K + LL L++++
Sbjct: 92 EQINETTYVDIHGNKSVF----DSLRNNPKVHY-DGRRFSYKSKHDLKGKDQLLVLVRKY 146
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDED 217
G+ + +V+++ P + L+ L E+ ++ + +++ ND A++ +D+D
Sbjct: 147 P----EGLAVVEVKDAYPTVMEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDD 202
Query: 218 FQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQD 249
++L+R + + D +D I++ L+K GI+P+ +
Sbjct: 203 LKQLFREMELPRDMVD---IEKELQKNGIKPMTN 233
>gi|115481880|ref|NP_001064533.1| Os10g0397200 [Oryza sativa Japonica Group]
gi|19881736|gb|AAM01137.1|AC108884_19 Putative Transcription initiation factor IIE, beta subunit [Oryza
sativa Japonica Group]
gi|31431902|gb|AAP53614.1| Transcription initiation factor IIE beta subunit, putative,
expressed [Oryza sativa Japonica Group]
gi|78708547|gb|ABB47522.1| Transcription initiation factor IIE beta subunit, putative,
expressed [Oryza sativa Japonica Group]
gi|113639142|dbj|BAF26447.1| Os10g0397200 [Oryza sativa Japonica Group]
gi|125574698|gb|EAZ15982.1| hypothetical protein OsJ_31427 [Oryza sativa Japonica Group]
Length = 279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 88/154 (57%), Gaps = 15/154 (9%)
Query: 99 EILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
E ++ET +D+ GNK ++L+NNPK+ +G ++ +K +K + LL L++++
Sbjct: 92 EQINETTYVDIHGNKSVF----DSLRNNPKVHY-DGRRFSYKSKHDLKGKDQLLVLVRKY 146
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDED 217
G+ + +V+++ P + L+ L E+ ++ + +++ ND A++ +D+D
Sbjct: 147 P----EGLAVVEVKDAYPTVMEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDD 202
Query: 218 FQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQD 249
++L+R + + D +D I++ L+K GI+P+ +
Sbjct: 203 LKQLFREMELPRDMVD---IEKELQKNGIKPMTN 233
>gi|242789623|ref|XP_002481401.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717989|gb|EED17409.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 283
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ + GIL+ D++E P E+ + L +++
Sbjct: 132 FSFRPPHNIRSEEQLLQKLQSQTT--MTGILVKDLKEGWPGVEQIIDKLERDGKLLVTRN 189
Query: 196 PADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK 254
D K+++ ND S D++F+++W + D+ ++ E LEK G+ P + K
Sbjct: 190 KKDNHPKMVWANDPSLMHKFDDEFRQIWEKTKIP--DHQQVIEELEKAGMIPTNKNKVVK 247
Query: 255 PVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
P + +K+ KKPR N H+ +L +Y
Sbjct: 248 P------RPKVEQKKTKKPRRTGKTTNTHMMGILRDY 278
>gi|449457584|ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
sativus]
gi|449499921|ref|XP_004160955.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
sativus]
Length = 277
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 99 EILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHD 158
E ++E +D+ + ++ ++L+NNPK+ +G ++ +K +KD+ LL L++
Sbjct: 94 EQINEACYVDINSNKAVY---DSLRNNPKVHY-DGRRFSYKSKHDLKDKNQLLYLVR--- 146
Query: 159 LKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDF 218
K GI + D++++ P + L+ L ++ ++ + + + ND Q+ +D+D
Sbjct: 147 -KFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDL 205
Query: 219 QKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
++L+R I + D +D +++ L+K G++P
Sbjct: 206 KQLFREIELPRDMLD---VEKDLQKNGMKP 232
>gi|302660439|ref|XP_003021899.1| hypothetical protein TRV_03988 [Trichophyton verrucosum HKI 0517]
gi|291185818|gb|EFE41281.1| hypothetical protein TRV_03988 [Trichophyton verrucosum HKI 0517]
gi|326469485|gb|EGD93494.1| hypothetical protein TESG_01038 [Trichophyton tonsurans CBS 112818]
Length = 290
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 87 HQDGDDHPLTIDEILDETNQLDVGNKV-------KIWLSTEALQNNPKIEVIEGNKYIFK 139
H G D PL +I + G+ + +I S + +Q +P EG + F+
Sbjct: 84 HMKGKDVPLKFSDIESYLSLSRQGHDMGYIHALRRILQSHDKVQYDPAGANGEGT-FQFR 142
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P I+ LL+ L+ K G+ + ++RE P + + L + +++ D
Sbjct: 143 PPHNIRSADQLLQHLQSQ--KTAQGMSVRELREGWPTIVETINKLEKEGKLLVTRNKKDN 200
Query: 200 R-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLP 258
K+++ ND S D +F ++W + + D+ + E LEK GI P H K
Sbjct: 201 HPKMIWANDPSLSQKFDPEFCQIWEKVKIP--DHQTVMEELEKAGITPTSKHKAAKARPK 258
Query: 259 GRKKNMNRKKQFKKPRDNEHLADVLENY 286
+K + + ++ K N H+A +L +Y
Sbjct: 259 VEQKKVKKARRSGK-TTNTHMAGILRDY 285
>gi|326484407|gb|EGE08417.1| transcription initiation factor IIE subunit beta [Trichophyton
equinum CBS 127.97]
Length = 290
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 87 HQDGDDHPLTIDEILDETNQLDVGNKV-------KIWLSTEALQNNPKIEVIEGNKYIFK 139
H G D PL +I + G+ + +I S + +Q +P EG + F+
Sbjct: 84 HMKGKDVPLKFSDIESYLSLSRQGHDMGYIHALRRILQSHDKVQYDPAGANGEGT-FQFR 142
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P I+ LL+ L+ K G+ + ++RE P + + L + +++ D
Sbjct: 143 PPHNIRSADQLLQHLQSQ--KTAQGMSVRELREGWPTIVETINKLEKEGKLLVTRNKKDN 200
Query: 200 R-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLP 258
K+++ ND S D +F ++W + + D+ + E LEK GI P H K
Sbjct: 201 HPKMIWANDPSLSQKFDPEFCQIWEKVKIP--DHQTVMEELEKAGITPTSKHKAAKARPK 258
Query: 259 GRKKNMNRKKQFKKPRDNEHLADVLENY 286
+K + + ++ K N H+A +L +Y
Sbjct: 259 VEQKKVKKTRRSGK-TTNTHMAGILRDY 285
>gi|302504377|ref|XP_003014147.1| hypothetical protein ARB_07452 [Arthroderma benhamiae CBS 112371]
gi|291177715|gb|EFE33507.1| hypothetical protein ARB_07452 [Arthroderma benhamiae CBS 112371]
Length = 290
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 87 HQDGDDHPLTIDEILDETNQLDVGNKV-------KIWLSTEALQNNPKIEVIEGNKYIFK 139
H G D PL +I + G+ + +I S + +Q +P EG + F+
Sbjct: 84 HMKGKDVPLKFSDIESYLSLSRQGHDMGYIHALRRILQSHDKVQYDPAGANGEGT-FQFR 142
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P I+ LL+ L+ K G+ + ++RE P + + L + +++ D
Sbjct: 143 PPHNIRSADQLLQHLQSQ--KTAQGMSVRELREGWPTIVETINKLEKEGKLLVTRNKKDN 200
Query: 200 R-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLP 258
K+++ ND S D +F ++W + + D+ + E LEK GI P H K
Sbjct: 201 HPKMIWANDPSLSQKFDPEFCQIWEKVKIP--DHQTVMEELEKAGITPTSKHKAAKTRPK 258
Query: 259 GRKKNMNRKKQFKKPRDNEHLADVLENY 286
+K + + ++ K N H+A +L +Y
Sbjct: 259 VEQKKVKKARRSGK-TTNTHMAGILRDY 285
>gi|226293335|gb|EEH48755.1| transcription initiation factor IIE subunit beta [Paracoccidioides
brasiliensis Pb18]
Length = 296
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S E +Q +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 124 RILQSHEKVQYDPSGANGEGT-FRFKPPHDIRTAEQLLRKLQSQPT--AQGMSVRELREG 180
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P + + L + +++ VTR D K+++ ND S D +F+ +W I + D
Sbjct: 181 WPTIVQTIDKLEKEGKLL-VTRNKKDDHPKMVWANDPSLIQHFDPEFRAIWEKIKIP--D 237
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
+ E LEK GI P + KP R K N+K KK R N H+ +L +Y
Sbjct: 238 QQTVTEELEKAGITPTSKNKVMKP----RPKVENKK--VKKARRSGKTTNTHMTGILRDY 291
>gi|258567918|ref|XP_002584703.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906149|gb|EEP80550.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 292
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P+ EG + F+P I+ + LL+ L+ G+ + ++RE
Sbjct: 120 RILQSHDKVEYDPQGAGSEGT-FRFRPPHNIRSAEQLLQKLQSQPT--AQGMSVRELREG 176
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P+ +++ L + +++ VTR D ++++ ND S D +F+++W + + D
Sbjct: 177 WPNIVESINKLEKEGKLL-VTRNKKDDHPRMVWANDPSLVHPFDTEFRQIWEKVKIP--D 233
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
+ + LEK GI P H K ++ +K+ KKPR N H+A +L +Y
Sbjct: 234 QQTVADELEKAGITPTSKHKAVK------QRPKVEQKKVKKPRRSGKTTNTHMAGILRDY 287
>gi|225683945|gb|EEH22229.1| transcription factor TFIIE beta subunit Tfa2 [Paracoccidioides
brasiliensis Pb03]
Length = 296
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S E +Q +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 124 RILQSHEKVQYDPSGANGEGT-FRFKPPHDIRTAEQLLRKLQSQPT--AQGMSVRELREG 180
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P + + L + +++ VTR D K+++ ND S D +F+ +W I + D
Sbjct: 181 WPTIVQTIDKLEKEGKLL-VTRNKKDDHPKMVWANDPSLIQHFDPEFRAIWEKIKIP--D 237
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
+ E LEK GI P + KP R K N+K KK R N H+ +L +Y
Sbjct: 238 QQTVTEELEKAGITPTSKNKVVKP----RPKVENKK--VKKARRSGKTTNTHMTGILRDY 291
>gi|295664589|ref|XP_002792846.1| transcription initiation factor IIE subunit beta [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226278367|gb|EEH33933.1| transcription initiation factor IIE subunit beta [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 296
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S E +Q +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 124 RILQSHEKVQYDPSGANGEGT-FRFKPPHDIRTAEQLLRKLQSQPT--AQGMSVRELREG 180
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P + + L + +++ VTR D K+++ ND S D +F+ +W I + D
Sbjct: 181 WPTIVQTIDKLEKEGKLL-VTRNKKDDHPKMVWANDPSLIQHFDPEFRAIWEKIKIP--D 237
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
+ E LEK GI P + KP R K N+K KK R N H+ +L +Y
Sbjct: 238 QQTVTEELEKAGITPTSKNKVVKP----RPKVENKK--VKKARRSGKTTNTHMTGILRDY 291
>gi|366998461|ref|XP_003683967.1| hypothetical protein TPHA_0A04600 [Tetrapisispora phaffii CBS 4417]
gi|357522262|emb|CCE61533.1| hypothetical protein TPHA_0A04600 [Tetrapisispora phaffii CBS 4417]
Length = 357
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query: 93 HPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLL 151
P+ ++E+ D L + K KI E L+ KI+ + N Y + + + + L+
Sbjct: 169 QPVLLNELCD---YLSISKKDKI---VELLKKLEKIQFDDKTNSYKYISTYDVHSTQELM 222
Query: 152 KLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKS 209
LL+ Q KGI ++++ P C++A+ L +++I+ + D+ + ++YN+ S
Sbjct: 223 HLLRSQVTFKGIS---CRELKDGWPGCDEAINELEEESKILVLRTKKDRTPRYVWYNNGS 279
Query: 210 AQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK----KPVLPGR---KK 262
++DE+F K+W ++ ++ ++ E R +QD G K P R K
Sbjct: 280 LLNNIDEEFVKMWENV--------QLPQFSELP--RKLQDLGLKPASVDPATIKRQTTKV 329
Query: 263 NMNRKKQFKKPRDNEHLADVLENY 286
+ RKKQ + N H+A +L++Y
Sbjct: 330 EVKRKKQRRGKITNTHMAGILKDY 353
>gi|255947014|ref|XP_002564274.1| Pc22g02300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591291|emb|CAP97518.1| Pc22g02300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 295
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I++ + LLK L+ G+ + ++RE P+ E+ + + + +++ VTR
Sbjct: 142 FRFRPPHNIRNSEQLLKYLQAQTTAA--GMSVRELREGWPNVEEEINRMEKEGKLL-VTR 198
Query: 196 PA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D K+++ ND S D++F+++W I V D +KE L+K GI P +
Sbjct: 199 NKKDDHPKMVWPNDPSLIEHFDDEFKQIWDKIKVP--DVKVVKEELDKFGITPTNKNKVL 256
Query: 254 KP--VLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
P + P +K KKPR N H+ +L +Y
Sbjct: 257 GPRVIAPSKKA--------KKPRRSGKTTNTHMTSILRDY 288
>gi|356513413|ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
max]
Length = 279
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E L+ NPK+ +G ++ +K + +KD+ LL+L++++ G+ + D++++ P +
Sbjct: 109 ENLRKNPKVNY-DGQRFSYKSKYGLKDKTELLQLIRKYP----EGLAVIDLKDAYPTVME 163
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ L +I ++ + + + ND + +D+D ++L+RSI + D +D I++
Sbjct: 164 DLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMID---IEK 220
Query: 238 YLEKQGIRP 246
L+K G++P
Sbjct: 221 DLQKNGMKP 229
>gi|400597560|gb|EJP65290.1| transcription initiation factor IIE subunit beta [Beauveria
bassiana ARSEF 2860]
Length = 300
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKIE----------VIEGNKYIFKPVFK-I 144
++ +I+D + + ++ K L+ E L+ +P++E + Y ++ V +
Sbjct: 96 SMKDIIDHLSVRNTSDEHKQQLA-EGLRGHPRVEWRPDTSLSEQTWQTGTYSYRAVVPGV 154
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR--KV 202
D LL L++ + + D+++ P CE L L +++I+ VTR + +
Sbjct: 155 TDATSLLAFLQRK--TDASSLAVRDLKDGWPDCEDTLARLEAEHKIL-VTRTNRENFPRH 211
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKK 262
++ +D S D+ +FQ LWR + + +D+ + L ++P + K G K
Sbjct: 212 VWLDDASLHHDIQPEFQALWRRVQIPSVDD--MHRKLTNASLKPTSEDPRKIAAAAGNKP 269
Query: 263 NMNRKKQFKK--PRDNEHLADVLENY 286
+K+ K+ + N H+ +L++Y
Sbjct: 270 KAQKKRASKRGGKQTNVHMTHLLQDY 295
>gi|225426874|ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
vinifera]
gi|297742556|emb|CBI34705.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
++L+NNPK+ +G ++ +K +KDR LL L++ K GI + D+++S P +
Sbjct: 111 DSLRNNPKVSY-DGKRFAYKSKHDLKDRSQLLVLVR----KFPEGIAVIDLKDSYPSVME 165
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ L ++ ++ + + + ND + +D+D ++ +R+I + D +D I++
Sbjct: 166 DLQALKAAGQVWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLD---IEK 222
Query: 238 YLEKQGIRP 246
L+K G++P
Sbjct: 223 DLQKNGMKP 231
>gi|326493090|dbj|BAJ85006.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 88/158 (55%), Gaps = 16/158 (10%)
Query: 95 LTIDEILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKL 153
T ++I DET +D+ GNK E+L+NN K+ +G ++ +K ++ + LL+L
Sbjct: 92 FTAEQINDET-YVDINGNKAVF----ESLRNNLKVHY-DGRRFSYKSKHDLEGKDQLLEL 145
Query: 154 LKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLD 213
++ H G+ + +V+++ P + L+ L E+ ++ + +++ ND ++
Sbjct: 146 IRCHQ----EGLAVVEVKDAYPSVLEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKVKIK 201
Query: 214 LDEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQD 249
+D+D ++L+R I + D +D I++ L+K G++P+ D
Sbjct: 202 VDDDLKELFRGIELPRDMVD---IEKDLQKNGMKPMTD 236
>gi|296814888|ref|XP_002847781.1| transcription initiation factor IIE subunit beta [Arthroderma otae
CBS 113480]
gi|238840806|gb|EEQ30468.1| transcription initiation factor IIE subunit beta [Arthroderma otae
CBS 113480]
Length = 290
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + +Q +P EG + F+P I+ LL+ L+ K G+ + ++RE
Sbjct: 118 RILQSHDKVQYDPAGANGEGT-FQFRPPHNIRSADQLLQHLQSQ--KTAQGMSVRELREG 174
Query: 174 LPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDN 232
P+ + + L + +++ D K+++ ND S D +F ++W + + D+
Sbjct: 175 WPNIVETINSLEKEGKLLVTRNKKDNHPKMIWANDPSLTQKFDPEFCQIWEKVKIP--DH 232
Query: 233 DKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ E LEK GI P H K +K + + ++ K N H+ +L +Y
Sbjct: 233 QTVMEELEKAGITPTSKHKAAKARPKVEQKKVKKARRSGK-TTNTHMTGILRDY 285
>gi|356497222|ref|XP_003517461.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Glycine max]
Length = 257
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 85/154 (55%), Gaps = 14/154 (9%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLL 154
LTI++I +E +D+ ++ E+++ NPK++ +G ++ +K ++D+ LL L+
Sbjct: 68 LTIEQI-NEACYVDMRANKDVF---ESMRKNPKVKY-DGERFSYKSKHAVRDKNQLLFLV 122
Query: 155 KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL 214
+ K GI + D+++S P+ + L+ L EI ++ + + + ND + +
Sbjct: 123 R----KFPEGIAVVDLKDSYPNVMEDLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKV 178
Query: 215 DEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
D+D ++L+R I + D +D I+ L+K G++P
Sbjct: 179 DDDLKQLFRGIELPRDMID---IERDLQKNGMKP 209
>gi|389638834|ref|XP_003717050.1| transcription initiation factor IIE subunit beta [Magnaporthe
oryzae 70-15]
gi|351642869|gb|EHA50731.1| transcription initiation factor IIE subunit beta [Magnaporthe
oryzae 70-15]
gi|440466646|gb|ELQ35904.1| transcription initiation factor IIE subunit beta [Magnaporthe
oryzae Y34]
gi|440486369|gb|ELQ66245.1| transcription initiation factor IIE subunit beta [Magnaporthe
oryzae P131]
Length = 310
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 135 KYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
KY P+ +KD LL+ L + K G+ + D+++ P C++ + L ++++ V
Sbjct: 155 KYEHLPIIPGVKDETSLLRYLSER--KTAQGVSVKDLKDGWPSCDETITKLEKAHKLLVV 212
Query: 194 -TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQD--- 249
T+ + ++ +D S D+D +F+ +W + V +++ I L G +P D
Sbjct: 213 RTKKDGVARTVWIDDPSLHHDVDAEFKLMWHRVEVPPLED--IVRKLAAAGQKPTSDDPQ 270
Query: 250 ---HGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
H K +K+ +N KK N H+A +L+N++ +
Sbjct: 271 LKVHAVAKDTKKNKKRAVNIKKM-----TNVHMAGLLKNFDHI 308
>gi|212534252|ref|XP_002147282.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210069681|gb|EEA23771.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces marneffei ATCC 18224]
Length = 290
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
+ F+P I+ + LL+ L+ + GIL+ D++E E+ + L + +++
Sbjct: 139 FSFRPPHNIRSEEQLLQKLQSQTT--MTGILVKDLKEGWSGVEQTIDKLEQEGKLLVTRN 196
Query: 196 PADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK 254
D K+++ ND S D++F+ +W V D ++ E LEK G+ P + K
Sbjct: 197 KKDNHPKMVWANDPSLMHKFDDEFRVIWEKTKVP--DQQQVIEDLEKAGMIPTNKNKVVK 254
Query: 255 PVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
P + +K+ KKPR N H+ +L +Y
Sbjct: 255 P------RPKVEQKKTKKPRRTGKTTNTHMMGILRDY 285
>gi|359807359|ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
gi|255639642|gb|ACU20115.1| unknown [Glycine max]
Length = 257
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLL 154
LTI++I +E +D+ ++ E+++ NPK++ +G ++ +K ++D+ LL L+
Sbjct: 68 LTIEQI-NEACYVDMRANKDVF---ESMRKNPKVKY-DGERFSYKSKHDVRDKNQLLFLV 122
Query: 155 KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL 214
+ K GI + D+++S P + L+ L EI ++ + + + ND + +
Sbjct: 123 R----KFPEGIAVVDLKDSYPTVMEDLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKV 178
Query: 215 DEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
D+D ++L+R I + D +D I+ L+K G++P
Sbjct: 179 DDDLKQLFRGIELPRDMID---IERDLQKNGMKP 209
>gi|242074266|ref|XP_002447069.1| hypothetical protein SORBIDRAFT_06g028040 [Sorghum bicolor]
gi|241938252|gb|EES11397.1| hypothetical protein SORBIDRAFT_06g028040 [Sorghum bicolor]
Length = 279
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 87/156 (55%), Gaps = 16/156 (10%)
Query: 95 LTIDEILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKL 153
T ++I D T +D+ GNK ++L+NNPK+ +G ++ +K +K + LL L
Sbjct: 89 FTAEQINDAT-YVDIHGNKAVF----DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVL 142
Query: 154 LKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLD 213
++ K G+ + +V+++ P+ + L+ L E+ ++ + +++ ND A++
Sbjct: 143 IR----KFPEGLAVVEVKDAYPNVLEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIK 198
Query: 214 LDEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRPI 247
+D+D ++L+R I + D +D I++ L++ G +P+
Sbjct: 199 VDDDLKQLFREIELPRDMVD---IEKELQRNGFKPM 231
>gi|357113796|ref|XP_003558687.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Brachypodium distachyon]
Length = 284
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
++L+NNPK++ +G ++ +K + + LL L++ + G+ + +V+++ P +
Sbjct: 115 DSLRNNPKVQ-FDGKRFSYKSKHDLNGKDQLLSLIRDYP----EGLPVVEVKDAYPSVLE 169
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ L +I +++ + + + ND +++ LD D + L+R I + D +D I++
Sbjct: 170 DLQALKASGDIWWLSSMDSQEDIAYPNDPKSKIKLDADLKDLYRGIELPRDMLD---IEK 226
Query: 238 YLEKQGIRPIQD 249
L+K G++P D
Sbjct: 227 ELQKNGLKPATD 238
>gi|356528032|ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
max]
Length = 280
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E L+ NPK+ +G + +K + IKD+ LL+L++++ G+ + D++++ P +
Sbjct: 110 ENLRKNPKVNY-DGQRLSYKSKYGIKDKTELLQLVRKYP----EGLAVIDLKDAYPTVME 164
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ + +I ++ + + + ND + +D+D + L+RSI + D +D I++
Sbjct: 165 DLQAMKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMID---IEK 221
Query: 238 YLEKQGIRP 246
L+K G++P
Sbjct: 222 DLQKNGMKP 230
>gi|388501696|gb|AFK38914.1| unknown [Lotus japonicus]
Length = 278
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
++++ NPK++ +G K+ +K ++D+K LL L++ K GI + D+++S P +
Sbjct: 108 DSMRKNPKVK-FDGEKFSYKSKHDLRDKKELLFLIR----KFPEGIAVIDLKDSYPTVLE 162
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ L EI ++ + + + ND + +D+D ++L+R I + D +D I+
Sbjct: 163 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMID---IER 219
Query: 238 YLEKQGIRP 246
L+K G++P
Sbjct: 220 DLQKNGMKP 228
>gi|217072652|gb|ACJ84686.1| unknown [Medicago truncatula]
Length = 217
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
+L+ NPK+E +G ++ +K + +K++ LL+L++++ G+ + D++++ P+ +
Sbjct: 114 SLRKNPKVEY-DGQRFSYKAKYGLKEKSELLQLIRRYP----EGLAVFDLKDAYPNVMED 168
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 227
L+ L +I ++ + + + ND A + +D+D ++L+RSI +
Sbjct: 169 LQALKAAGQIWLLSNFDSQDDITYPNDPKANIKVDDDLKQLFRSIEL 215
>gi|224058567|ref|XP_002299546.1| predicted protein [Populus trichocarpa]
gi|222846804|gb|EEE84351.1| predicted protein [Populus trichocarpa]
Length = 284
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
++L+NNPK+ +G ++ +K +KD+ LL L++ K GI + D+++S P
Sbjct: 115 DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLIR----KFPEGIAVIDLKDSYPSVMD 169
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
L+ L +I ++ + + + ND + +D+D ++L+R I + D +D I++
Sbjct: 170 DLQALKAVGQIWLLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLD---IEK 226
Query: 238 YLEKQGIRP 246
L+K G++P
Sbjct: 227 DLQKNGMKP 235
>gi|358060329|dbj|GAA93734.1| hypothetical protein E5Q_00380 [Mixia osmundae IAM 14324]
Length = 246
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 55 GSSNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNK-- 112
G + A + +G +Q + A ++ H+K R + P+ +++++D T+ +G
Sbjct: 5 GRTGIAAQQREAGGTQAATQLYAAVL-HLKDR-----NGPVRLEDLIDYTSAHLLGQPGA 58
Query: 113 ------VKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGIL 166
++ E ++ +P+ ++ Y ++P+ +I L +++K KG GI
Sbjct: 59 EQEGGLLRALRQHERVEYDPRTDL-----YSWRPLHRITTTADLYRIVKTEGEKG--GIK 111
Query: 167 LDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-------KVMFYNDKSAQLDLDEDFQ 219
+ ++ES P E+ ++ L +II VTR K +++F ++ ++ +D DF+
Sbjct: 112 VSLLKESCPTVEQHIRTLEQDGKII-VTRGESKEFGKEGPMRMVFPDEIGQKILIDPDFR 170
Query: 220 KLWRSISVDG 229
KLW I G
Sbjct: 171 KLWEEIKTPG 180
>gi|281205063|gb|EFA79256.1| hypothetical protein PPL_07674 [Polysphondylium pallidum PN500]
Length = 202
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 78 KIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYI 137
+I+KH+K + +T +++ + T N L ++L+ N IE +
Sbjct: 9 EIIKHLKLL----EGQYITFEDLYNSTGHNLYNNH----LLLQSLKQNTFIEFLNDKTLR 60
Query: 138 FKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPA 197
+ P +++K++ +L+LL + GILL+D++ S + E + L I V
Sbjct: 61 YIPQYQVKNQNDILELLSRQP----EGILLEDLKASYANAENDVNKLKQSKSIYSVISSN 116
Query: 198 DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVL 257
K + ++YND+ ++ ++ +LW S+ V ++ D ++ + + G+ P++ + K +
Sbjct: 117 SKSEKIYYNDEKYRVPCSDELVRLWGSVEV-PIEVD-LENVMREAGLTPVEKYETTKTI- 173
Query: 258 PGRKKNMNRKKQFKKPR 274
K N +KQ KK R
Sbjct: 174 ----KVKNVEKQEKKRR 186
>gi|346974437|gb|EGY17889.1| transcription initiation factor IIE subunit beta [Verticillium
dahliae VdLs.17]
Length = 277
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 133 GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
G + + IKD+ GLL L+ + +L +++E P C+ AL L +N+II
Sbjct: 125 GTYFYLGKLGGIKDKVGLLGHLQAKS--SMEPLLYKELKEGWPQCDAALAELKRENKIIT 182
Query: 193 VTRPADKRKV--MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRP 246
V DK+ + +F +D + + +++DF+ +W+ + V ND I + L G +P
Sbjct: 183 V---EDKKTIKHIFIDDPTLRHTVEDDFKNMWKRVVVPS--NDDIVKKLVAAGQKP 233
>gi|414585525|tpg|DAA36096.1| TPA: hypothetical protein ZEAMMB73_089157 [Zea mays]
Length = 292
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 99 EILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
E ++E +D+ GNK ++L+NNPK+ +G ++ +K +K + LL L++
Sbjct: 105 EQINEATYVDIHGNKAVF----DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVLIR-- 157
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDED 217
K G+ + +V+++ + + L+ L E+ ++ + +++ ND A++ +D+D
Sbjct: 158 --KFPEGLAVVEVKDAYSNVLEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDD 215
Query: 218 FQKLWRSISV--DGMDNDKIKEYLEKQGIRPI 247
++L+R I + D +D I++ L+K G +P+
Sbjct: 216 LKQLFREIELPRDMVD---IEKELQKNGFKPM 244
>gi|212723734|ref|NP_001131460.1| uncharacterized protein LOC100192795 [Zea mays]
gi|194691592|gb|ACF79880.1| unknown [Zea mays]
gi|414585524|tpg|DAA36095.1| TPA: hypothetical protein ZEAMMB73_089157 [Zea mays]
Length = 279
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 85/154 (55%), Gaps = 15/154 (9%)
Query: 99 EILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
E ++E +D+ GNK ++L+NNPK+ +G ++ +K +K + LL L++
Sbjct: 92 EQINEATYVDIHGNKAVF----DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVLIR-- 144
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDED 217
K G+ + +V+++ + + L+ L E+ ++ + +++ ND A++ +D+D
Sbjct: 145 --KFPEGLAVVEVKDAYSNVLEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDD 202
Query: 218 FQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQD 249
++L+R I + D +D I++ L+K G +P+ +
Sbjct: 203 LKQLFREIELPRDMVD---IEKELQKNGFKPMTN 233
>gi|449302289|gb|EMC98298.1| hypothetical protein BAUCODRAFT_121175 [Baudoinia compniacensis
UAMH 10762]
Length = 286
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 73 FGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIE--V 130
F V+ V+++K ++ P+ +EI+ + L V + K AL+ + +++
Sbjct: 62 FKVVVNTVEYLKGKNA----APVPFEEIIRYLS-LPVDLQRKQETIKRALRTHNRVQQIT 116
Query: 131 IEGNK-YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNE 189
I+G + + ++P + + LL L + D GI + ++++ P C LK L +
Sbjct: 117 IDGKESFKYRPQHDVTNGDELLSYLARQD--SAAGIPVKELKDGWPDCVPTLKRLEADGQ 174
Query: 190 IIYVTRPADKRKVMFYND---------KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE 240
++ + D + Y D S + +D +F W I + +ND I+ LE
Sbjct: 175 VLLTSNKKDGVPRVVYADDPSYYPASTSSLKGAVDPEFVDFWSKIRLPANEND-IRVELE 233
Query: 241 KQGIRPIQD-HGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ G+ P KK + KK KK KK N HLA VL++Y
Sbjct: 234 RAGLTPTSAVREVKKVEMRKDKKRRAEKKNAKK--TNVHLAGVLKDY 278
>gi|357481679|ref|XP_003611125.1| General transcription factor IIE subunit [Medicago truncatula]
gi|355512460|gb|AES94083.1| General transcription factor IIE subunit [Medicago truncatula]
gi|388501522|gb|AFK38827.1| unknown [Medicago truncatula]
Length = 270
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLL 154
LT+++I +ET +D+ ++ + ++ NPK+ +G ++ +K ++D+K LL L+
Sbjct: 79 LTLEQI-NETCHVDMKANKDVF---DNMRKNPKVRY-DGERFSYKSKHALRDKKELLFLI 133
Query: 155 KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL 214
+ K GI + D+++S P + L+ L EI ++ + + + ND + +
Sbjct: 134 R----KFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQEDIAYPNDPKVPIKV 189
Query: 215 DEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
D+D ++L+R I + D +D I+ L+K G++P
Sbjct: 190 DDDLKQLFRGIELPRDMID---IERDLQKNGMKP 220
>gi|302407962|ref|XP_003001816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359537|gb|EEY21965.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 277
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 133 GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
G + + IKD+ GLL L+ + +L +++E P C+ AL L +N+II
Sbjct: 125 GTYFYLGKLGGIKDKIGLLGHLQAKS--SMEPLLYKELKEGWPQCDAALAELKRENKIIT 182
Query: 193 VTRPADKRKV--MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRP 246
V DK+ + +F +D + + +++DF+ +W+ + V ND I + L G +P
Sbjct: 183 V---EDKKTIKHIFIDDPTLRHTVEDDFKNMWKRVVVPS--NDDIVKKLVAAGQKP 233
>gi|255638616|gb|ACU19614.1| unknown [Glycine max]
Length = 246
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E L+ NPK+ +G ++ +K + +KD+ LL+L++++ G+ + D++++ P +
Sbjct: 109 ENLRKNPKVNY-DGQRFSYKSKYGLKDKTELLQLIRKYP----EGLAVIDLKDAYPTVME 163
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKI 235
L+ L +I ++ + + + ND + +D+D ++L+RSI + D +D +KI
Sbjct: 164 DLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKI 221
>gi|358394911|gb|EHK44304.1| hypothetical protein TRIATDRAFT_223534 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKI----------EVIEGNKYIFKPVFK-I 144
TI +I+D + + + K L E L+ +P++ + + Y +P+ +
Sbjct: 98 TITDIIDHLSLRNYTEEHKKEL-MEGLRGHPRVDWKPDASLSEQTWKTGTYKHRPIIPGV 156
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
+D LL L++ G+ + D+++ P CE L L +++++ V T+ + + +
Sbjct: 157 RDGTSLLAHLQRK--TDASGVSVKDLKDGWPDCEDTLAKLEREHKVLVVRTKKDNFPRYV 214
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKN 263
+ +D S ++ +FQ +WR + + +D+ + L G +P D K V K+
Sbjct: 215 WADDASLHNPVEPEFQAMWRRVQLPSLDD--MHRKLVSVGQKPTSDDPRKAAVTTKPKQQ 272
Query: 264 MNRKKQFKKPRDNEHLADVLENYEAV 289
R + N H+ +L +Y +
Sbjct: 273 KKRAGKRIGKATNTHMTHLLNDYSGM 298
>gi|154277814|ref|XP_001539740.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413325|gb|EDN08708.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 298
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 126 RILQSHDKVEYDPSGANGEGT-FRFKPPHNIRSAEQLLRKLQSQPT--AQGMSVRELREG 182
Query: 174 LPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDN 232
P+ +A+ L + +++ D + K+++ ND S D +F+++W I + D
Sbjct: 183 WPNIVQAIDKLEEEGKLLVTRNKKDNQPKMVWANDPSLIQHFDPEFRQIWEKIKIP--DQ 240
Query: 233 DKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + LEK GI + KP K + + ++ K N H+ VL +Y
Sbjct: 241 QTVTDELEKAGITSTSKNKVTKPKPKVEHKKVKKARRSGK-TTNTHMVGVLRDY 293
>gi|225560922|gb|EEH09203.1| transcription initiation factor IIE subunit beta [Ajellomyces
capsulatus G186AR]
Length = 298
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 126 RILQSHDKVEYDPSGANGEGT-FRFKPPHNIRSAEQLLRKLQSQPT--AQGMSVRELREG 182
Query: 174 LPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDN 232
P+ +A+ L + +++ D + K+++ ND S D +F+++W I + D
Sbjct: 183 WPNIVQAIDKLEEEGKLLVTRNKKDNQPKMVWANDPSLIQHFDPEFRQIWEKIKIP--DQ 240
Query: 233 DKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + LEK GI + KP K + + ++ K N H+ VL +Y
Sbjct: 241 QTVTDELEKAGITSTSKNKVTKPKPKVEHKKVKKARRSGK-TTNTHMVGVLRDY 293
>gi|84468356|dbj|BAE71261.1| hypothetical protein [Trifolium pratense]
Length = 270
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLL 154
LT+++I +ET +D+ ++ + ++ NPK+ +G ++ +K ++D+K LL L+
Sbjct: 79 LTLEQI-NETCHVDMKANKDVF---DNMRKNPKVRY-DGERFSYKSKHSLRDKKELLFLI 133
Query: 155 KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL 214
+ K GI + D+++S P + L+ L EI ++ + + + ND + +
Sbjct: 134 R----KFPEGIAVIDLKDSYPTVMEDLQALKAGREIWLLSNFDSQEDIAYPNDPKVPIKV 189
Query: 215 DEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
D+D + L+R I + D +D I+ L+K G++P
Sbjct: 190 DDDLKLLFRGIELPRDMLD---IERDLQKNGMKP 220
>gi|148909642|gb|ABR17912.1| unknown [Picea sitchensis]
Length = 284
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLL 154
LT EI +E +D+ ++ E+L+ N K+ +G+++ +K +KD+ LL L+
Sbjct: 99 LTPAEI-NEACYVDINANKGVF---ESLKKNVKVNY-DGHRFCYKSKHDLKDKHELLVLI 153
Query: 155 KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL 214
+ K G+ + D++++ P L+ L ++ ++ + +++ ND ++ +
Sbjct: 154 R----KAPEGVAVIDLKDAYPSVLDDLQELKASGDVWLLSNYDSQEDIVYPNDPKVKIKV 209
Query: 215 DEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQDHGFKKPVL 257
DED ++L+R I + D +D I++ L+K G++P + +K +
Sbjct: 210 DEDVKQLYREIELPKDMVD---IEKDLQKNGMKPATNTAKRKAAM 251
>gi|240280522|gb|EER44026.1| transcription initiation factor IIE subunit beta [Ajellomyces
capsulatus H143]
gi|325096409|gb|EGC49719.1| transcription initiation factor IIE subunit beta [Ajellomyces
capsulatus H88]
Length = 298
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 126 RILQSHDKVEYDPSGANGEGT-FRFKPPHNIRSAEQLLRKLQSQPT--AQGMSVRELREG 182
Query: 174 LPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDN 232
P+ +A+ L + +++ D + K+++ ND S D +F+++W I + D
Sbjct: 183 WPNIVQAIDKLEEEGKLLVTRNKKDNQPKMVWANDPSLIQHFDPEFRQIWEKIKIP--DQ 240
Query: 233 DKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + LEK GI + KP K + + ++ K N H+ VL +Y
Sbjct: 241 QTVTDELEKAGITSTSKNKVTKPKPKVEHKKVKKARRSGK-TTNTHMVGVLRDY 293
>gi|239608042|gb|EEQ85029.1| transcription initiation factor TFIIE [Ajellomyces dermatitidis
ER-3]
gi|327356505|gb|EGE85362.1| transcription initiation factor TFIIE [Ajellomyces dermatitidis
ATCC 18188]
Length = 299
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 127 RILQSHDKVEYDPSGANGEGT-FRFKPPHNIRSAEQLLRKLQSQPT--AQGMSVRELREG 183
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P+ + + L + +++ VTR D K+++ ND S D +F+++W I + D
Sbjct: 184 WPNIVQTIDKLEKEGKLL-VTRNKKDDHPKMVWANDPSLIQHFDPEFRQIWEKIKIP--D 240
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ E LEK GI + KP K + + ++ K N H+ VL +Y
Sbjct: 241 QQAVTEELEKAGITSTSKNKVAKPKPKIEHKKVKKARRSGK-TTNTHMVGVLRDY 294
>gi|261200086|ref|XP_002626444.1| transcription initiation factor TFIIE [Ajellomyces dermatitidis
SLH14081]
gi|239594652|gb|EEQ77233.1| transcription initiation factor TFIIE [Ajellomyces dermatitidis
SLH14081]
Length = 299
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 114 KIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 173
+I S + ++ +P EG + FKP I+ + LL+ L+ G+ + ++RE
Sbjct: 127 RILQSHDKVEYDPSGANGEGT-FRFKPPHNIRSAEQLLRKLQSQPT--AQGMSVRELREG 183
Query: 174 LPHCEKALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMD 231
P+ + + L + +++ VTR D K+++ ND S D +F+++W I + D
Sbjct: 184 WPNIVQTIDKLEKEGKLL-VTRNKKDDHPKMVWANDPSLIQHFDPEFRQIWEKIKIP--D 240
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ E LEK GI + KP K + + ++ K N H+ VL +Y
Sbjct: 241 QQAVTEELEKAGITSTSKNKVAKPKPKIEHKKVKKARRSGK-TTNTHMVGVLRDY 294
>gi|296424816|ref|XP_002841942.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638194|emb|CAZ86133.1| unnamed protein product [Tuber melanosporum]
Length = 285
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 120 EALQNNPKIEV-IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
E L+ N +I + + FKP+ I+ + LL L+Q G+ + ++++
Sbjct: 110 EILKRNERITYDASADTFEFKPIHNIRSAQALLAFLQQQTTAQ--GLSVKELKDGWSGAI 167
Query: 179 KALKHLSLQNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L ++EI+ T+ ++ ++++ ND++ + ++E+F+ +W + + ++
Sbjct: 168 DTIADLEERSEILVTRTKKDNQPRMVWINDRTLDVVVEEEFRNIWHKVVIPA--PGELPG 225
Query: 238 YLEKQGIRP--IQDHGFKKPVLP---GRKKNMNRKKQFKKPRDNEHLADVLEN 285
LE+ G++P + KK V GRK+ +NR+ + N H+ +L++
Sbjct: 226 ELERAGLKPTSVDPATVKKDVKATQKGRKRTVNRRVKI----SNTHMNGILKD 274
>gi|302918138|ref|XP_003052594.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733534|gb|EEU46881.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 304
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKI----------EVIEGNKYIFKPVF-KI 144
+I EI+D + + K L+ E L+ +P++ + + Y +P+ +
Sbjct: 100 SITEIIDHLSLRGYDEEHKRELA-EGLRGHPRVDWKPDASLSEQTWKTGTYAHRPIIPNV 158
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
KD LL L+ G+ + D+++ P CE L L Q+ I+ V T+ + + +
Sbjct: 159 KDATSLLGHLQAK--TDASGVSVKDLKDGWPDCEDTLAKLEQQHRILVVRTKKDNLPRYV 216
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKN 263
+ ND S + +FQ +W + + +D+ + L G +P + K K
Sbjct: 217 WPNDASLHHSVQPEFQAMWHRVPLPSIDD--MHRKLVSVGQKPTSEDPHKAAQGQAAKPK 274
Query: 264 MNRKKQFKK--PRDNEHLADVLENYEAV 289
+++ K+ N H+A ++++Y +
Sbjct: 275 QQKRRAGKRIGKATNVHMAHLMQDYSGM 302
>gi|358386276|gb|EHK23872.1| hypothetical protein TRIVIDRAFT_58003 [Trichoderma virens Gv29-8]
Length = 298
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKIE----------VIEGNKYIFKPVFK-I 144
TI +I+D + + + K L TE L+ +P++E + Y +P+ +
Sbjct: 95 TITDIIDHLSLRNYTEEHKKEL-TEGLRGHPRVEWRPDPSLSEQTWKTGTYKHRPIIPGV 153
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
KD LL L++ G+ + D+++ P CE L L +++I+ V T+ + + +
Sbjct: 154 KDATSLLAHLQRK--TDSSGVSVKDLKDGWPDCEDTLAKLEHEHKILVVRTKKDNFPRYV 211
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQD 249
+ +D S ++ +FQ +WR + + +D+ + L G +P D
Sbjct: 212 WADDASLHNSVEPEFQAMWRRVQLPSLDD--MHRKLVSVGQKPTSD 255
>gi|50294380|ref|XP_449601.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528915|emb|CAG62577.1| unnamed protein product [Candida glabrata]
Length = 315
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 127 KIEVIEGN--KYIFK--PVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKAL 181
K+E IE + K FK + + + LL LLK Q KGI D+++ P CE+ +
Sbjct: 152 KLERIEFDEKKSTFKYLSTYDVHSAQELLTLLKNQVTFKGIS---FKDLKDGWPQCEETI 208
Query: 182 KHLSLQNEIIYVTRPADKRKVMFYNDKSAQLD-LDEDFQKLWRSISVDGMDNDKIKEYLE 240
L +++I+ + DK + ++ L+ +DE+F K+W ++ + ++ L+
Sbjct: 209 NDLEEESQILVLRTKKDKTPRYVWYNRGGNLNCIDEEFVKVWENVQLPQF--TELPRKLQ 266
Query: 241 KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRD------NEHLADVLENY 286
+ G++P + P K + + KK R+ N H+A +L++Y
Sbjct: 267 ELGLKPAS-------IDPSSVKRQTTRVEVKKKRNRRGKITNTHMAGILKDY 311
>gi|410081297|ref|XP_003958228.1| hypothetical protein KAFR_0G00600 [Kazachstania africana CBS 2517]
gi|372464816|emb|CCF59093.1| hypothetical protein KAFR_0G00600 [Kazachstania africana CBS 2517]
Length = 325
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + + + + LL LL+ Q KGI ++++ P C++ + L +N+I+
Sbjct: 173 NTFKYISTYDVHSASELLALLRSQVTFKGIS---CKELKDGWPQCDETINQLEEENKILV 229
Query: 193 VTRPADKRKVMFYNDKSAQLD-LDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
+ DK + + LD +DE+F K W +I ++ ++ E R +QD G
Sbjct: 230 LRTKKDKTPRFVWYNNGGDLDRIDEEFVKTWENI--------QLPQFAELP--RKLQDLG 279
Query: 252 FK-KPVLPGRKKNMNRKKQFKKPRD------NEHLADVLENY 286
K V P K K + KK R N H+A +L++Y
Sbjct: 280 LKPASVDPATIKRQTAKVEVKKKRQRKGKITNTHMAGILKDY 321
>gi|396081505|gb|AFN83121.1| transcription initiation factor TFIIE subunit beta [Encephalitozoon
romaleae SJ-2008]
Length = 270
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 92 DHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLL 151
D P+T +EI D+T ++D+ N ++ ++++ NP+I V + +FKP++ I+ + L
Sbjct: 84 DRPVTFEEIKDKT-RIDLHNN---YMLLQSIKKNPRI-VATHSTLMFKPLYSIRGVEDLR 138
Query: 152 KLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQ 211
K++K+ + G G+ + + +S + ++ L +EII V D +++F+ND +
Sbjct: 139 KVMKE--INGEEGLEMSKLMDSPVNITPFVEELKRNDEII-VLSDIDGSEIVFWNDMHEK 195
Query: 212 LDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK-PVLPGRKKNMNRKK 268
+D + LW + + +D I+E L G++ + KK P + +K +R++
Sbjct: 196 -PIDPQIKSLWSQVRISTY-HDLIRE-LNTAGLKTEKVENIKKRPTIKIKKDRKSRRR 250
>gi|378731197|gb|EHY57656.1| transcription initiation factor TFIIE beta subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 232
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 122 LQNNPKIEV-IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
L NPK+ + Y FKP + I LLK L+ GI + D+++ P E+
Sbjct: 63 LNVNPKVNYDAAADTYKFKPTYNIASADDLLKYLQNQG--SALGISVRDLKDGWPDVEET 120
Query: 181 LKHLSLQNEIIYVTRPADKRKVMFY-NDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L Q++++ V D M + +D + LD++F+ +W I + ++ D IKE
Sbjct: 121 IDRLEAQHKLLVVRNKKDHHPRMVWLDDPTLVAPLDQEFKDIWLQIPLPSVE-DTIKE 177
>gi|401624785|gb|EJS42826.1| tfa2p [Saccharomyces arboricola H-6]
Length = 328
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEVKKKRQRKGKITNTHMTGILKDY 324
>gi|365759631|gb|EHN01410.1| Tfa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401837946|gb|EJT41782.1| TFA2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 328
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEIKKKRQRKGKVTNTHMTGILKDY 324
>gi|401826580|ref|XP_003887383.1| transcription initiation factor IIE subunit beta [Encephalitozoon
hellem ATCC 50504]
gi|395459901|gb|AFM98402.1| transcription initiation factor IIE subunit beta [Encephalitozoon
hellem ATCC 50504]
Length = 218
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 92 DHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLL 151
D PLT +EI D+T ++D+ N ++ ++++ NP+I V + +FKP++ I+ + L
Sbjct: 32 DRPLTFEEIKDKT-RIDLHNN---YMLLQSIKKNPRI-VATHSTLMFKPLYSIRGVEDLR 86
Query: 152 KLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQ 211
K++++ + G G+ + + +S + ++ L EII V D +V+F+ND +
Sbjct: 87 KVMRE--INGEEGLEMSKLMDSPVNIAPFVEELRRNGEII-VLNDIDGSEVVFWNDMHEK 143
Query: 212 LDLDEDFQKLWRSISVDGMDNDKIKE 237
+D + LW + + +D I+E
Sbjct: 144 -PVDPQIKSLWSQVRISTY-HDLIRE 167
>gi|340517094|gb|EGR47340.1| predicted protein [Trichoderma reesei QM6a]
Length = 300
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKIE----------VIEGNKYIFKPVFK-I 144
TI +I+D + + + K L TE L+ +P++E + Y +P+ +
Sbjct: 97 TIQDIIDHLSLRNYTEEHKKEL-TEGLRRHPRVEWRPDPSLSEQTWKTGTYKHRPIIPGV 155
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
KD LL L++ G+ + D+++ P CE+ L L +++++ V T+ + + +
Sbjct: 156 KDATSLLAHLQRK--TDASGVSVKDLKDGWPDCEETLAKLEREHKVLVVRTKKDNFPRYV 213
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQD 249
+ +D S ++ +FQ +WR + + +++ + L G +P D
Sbjct: 214 WADDPSLHHKVEPEFQAMWRRVQLPSLED--MHRKLVSVGQKPTSD 257
>gi|6322915|ref|NP_012988.1| Tfa2p [Saccharomyces cerevisiae S288c]
gi|308153548|sp|P36145.3|T2EB_YEAST RecName: Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta; AltName: Full=Factor A 43 kDa subunit;
AltName: Full=Transcription factor A small subunit
gi|486527|emb|CAA82141.1| TFA2 [Saccharomyces cerevisiae]
gi|151941602|gb|EDN59965.1| transcription factor TFIIE subunit [Saccharomyces cerevisiae
YJM789]
gi|256269290|gb|EEU04601.1| Tfa2p [Saccharomyces cerevisiae JAY291]
gi|259147891|emb|CAY81141.1| Tfa2p [Saccharomyces cerevisiae EC1118]
gi|285813316|tpg|DAA09213.1| TPA: Tfa2p [Saccharomyces cerevisiae S288c]
gi|323336792|gb|EGA78056.1| Tfa2p [Saccharomyces cerevisiae Vin13]
gi|349579621|dbj|GAA24783.1| K7_Tfa2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764435|gb|EHN05958.1| Tfa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298204|gb|EIW09302.1| Tfa2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 328
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEVKKKRQRKGKITNTHMTGILKDY 324
>gi|207343352|gb|EDZ70833.1| YKR062Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 328
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEVKKKRQRKGKITNTHMTGILKDY 324
>gi|190409875|gb|EDV13140.1| transcription initiation factor IIE beta subunit [Saccharomyces
cerevisiae RM11-1a]
gi|323332643|gb|EGA74049.1| Tfa2p [Saccharomyces cerevisiae AWRI796]
Length = 328
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEVKKKRQRKGKITNTHMTGILKDY 324
>gi|357481685|ref|XP_003611128.1| General transcription factor IIE subunit [Medicago truncatula]
gi|355512463|gb|AES94086.1| General transcription factor IIE subunit [Medicago truncatula]
Length = 307
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Query: 95 LTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVF-----KIKDRKG 149
LT+++I +ET +D+ ++ + ++ NPK+ +G ++ +K F ++D+K
Sbjct: 111 LTLEQI-NETCHVDMKANKDVF---DNMRKNPKVRY-DGERFSYKVTFILSKHALRDKKE 165
Query: 150 LLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKS 209
LL L++ K GI + D+++S P + L+ L EI ++ + + + ND
Sbjct: 166 LLFLIR----KFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQEDIAYPNDPK 221
Query: 210 AQLDLDEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRP 246
+ +D+D ++L+R I + D +D I+ L+K G++P
Sbjct: 222 VPIKVDDDLKQLFRGIELPRDMID---IERDLQKNGMKP 257
>gi|403214732|emb|CCK69232.1| hypothetical protein KNAG_0C01190 [Kazachstania naganishii CBS
8797]
Length = 241
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLS-TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLK 152
P+ I+E++D + L +KV L E ++ +PK N + + + + L++
Sbjct: 54 PVPINELMDYLS-LSPNDKVLDLLKKLEKIEFDPK-----KNAFRYISTYDVHSPAELIR 107
Query: 153 LLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSA 210
LLK Q KGI ++++ P C++A+ L +++I+ + D+ + ++YN
Sbjct: 108 LLKSQVTFKGIS---CKELKDGWPQCDEAINELEEESKILVLRTKKDRTPRYVWYNSGGD 164
Query: 211 QLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKP-VLPGRKKNMNRKKQ 269
+D++F K+W +N ++ ++ E R +QD G K V P K + +
Sbjct: 165 LHRIDDEFIKMW--------ENVQLPQFSELP--RKLQDLGLKPASVDPASIKRQTSRVE 214
Query: 270 FKKPRD------NEHLADVLENYEA 288
KK R N H+A +L++Y +
Sbjct: 215 VKKKRQRKGKVTNTHMAGILKDYSS 239
>gi|367017308|ref|XP_003683152.1| hypothetical protein TDEL_0H00820 [Torulaspora delbrueckii]
gi|359750816|emb|CCE93941.1| hypothetical protein TDEL_0H00820 [Torulaspora delbrueckii]
Length = 307
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKL 153
P+ ++E++D + +++ + +Q++PK + + + + + L+ L
Sbjct: 120 PVLVNELMDYLSMKKDDKVLELLKKLDKIQHDPK-----KGTFKYMSTYDVHSAQELIHL 174
Query: 154 LK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSAQ 211
L+ Q KGI ++++ P C++ + L ++I+ + DK + ++YN+
Sbjct: 175 LRSQVTFKGIS---CKELKDGWPQCDETINELEEDSKILVLRTKKDKTPRYVWYNNGGEL 231
Query: 212 LDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK----PVLPGRKKN---M 264
+DEDF K+W +N ++ ++ E R +QD G K P R+ +
Sbjct: 232 NRIDEDFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATVKRQTTRVEV 281
Query: 265 NRKKQFKKPRDNEHLADVLENY 286
+KKQ + N H+A +L++Y
Sbjct: 282 KKKKQRRGKITNTHMAGILKDY 303
>gi|607956|gb|AAA62664.1| transcription factor TFIIE, small subunit [Saccharomyces
cerevisiae]
Length = 328
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 192 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNR 248
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 249 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 298
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 299 RVEVKKKRQRKGKITNTHMTGILKDY 324
>gi|398396722|ref|XP_003851819.1| hypothetical protein MYCGRDRAFT_93943 [Zymoseptoria tritici IPO323]
gi|339471699|gb|EGP86795.1| hypothetical protein MYCGRDRAFT_93943 [Zymoseptoria tritici IPO323]
Length = 245
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 121 ALQNNPKIEVIE---GNKYIFKPVFKIKDRKGLLKLL-KQHDLKGIGGILLDDVRESLPH 176
AL +P++E + G + FKPV + LL+ L +Q D K + + D++ P
Sbjct: 79 ALSAHPRVESKDDKDGIVFQFKPVIPATNADDLLEYLARQQDSKQV---TVADLQVGWPD 135
Query: 177 CEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIK 236
C + L + I+ V R K + ++ + + +D+DF+ LW I V D ++I+
Sbjct: 136 CVPEVNRLERAHHIL-VRRVKGKARAVWLDSPDLHMQVDDDFRDLWSGIKV-PEDIEEIR 193
Query: 237 EYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ L+ + + + PV+ +K ++ K + N+H+ VL+N+
Sbjct: 194 KDLKTTNMM-VTSEKKEVPVVRPKKSKKGGRRAGKGIQTNKHMESVLKNF 242
>gi|452843637|gb|EME45572.1| hypothetical protein DOTSEDRAFT_71319 [Dothistroma septosporum
NZE10]
Length = 289
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 120 EALQNNPKIEVIEGNK-------YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRE 172
EAL+ + ++E + +K + ++P+ + + + L + L G+ + ++++
Sbjct: 111 EALKGDERVEFVPKSKSGNNKDCFKYRPLHPVTNAEELKEYLAIRSTYTAAGVTVKELKD 170
Query: 173 SLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDK-SAQLDLDEDFQKLWRSISVDGMD 231
P C A+ L + ++ D V Y D S + +D+DF+ + +
Sbjct: 171 GWPDCVPAIDQLEKEGFVLATRHKKDNAPVRIYADSPSYHIHIDDDFRDFCNKTKLPASE 230
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
D I+ LE+ GI P V RK N +K++ + R N+H+ +L+N+
Sbjct: 231 LD-IRNELERAGITPTSQ------VKEIRKGNTQKKERKRINRIGTKITNKHMNGILKNF 283
Query: 287 E 287
+
Sbjct: 284 D 284
>gi|346323658|gb|EGX93256.1| transcription initiation factor TFIIE, beta subunit, putative
[Cordyceps militaris CM01]
Length = 298
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 120 EALQNNPKIE----------VIEGNKYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLD 168
E L+ +P++E Y ++PV + D LL L++ + +
Sbjct: 118 EGLRGHPRVEWRPDTSLSEQTWRTGSYNYRPVVPGVTDATSLLAFLQRKS--DASSLAVR 175
Query: 169 DVRESLPHCEKALKHLSLQNEIIYVTRPADKR--KVMFYNDKSAQLDLDEDFQKLWRSIS 226
D+++ P CE L L Q+ I+ VTR + + ++ +D S + +FQ +WR +
Sbjct: 176 DLKDGWPECEDTLARLETQHRIL-VTRTNRENFPRHVWLDDASLHHAIQPEFQAMWRRVQ 234
Query: 227 VDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKK--PRDNEHLADVLE 284
+ +D+ + L ++P + +K K + +K+ K+ + N H+ +L+
Sbjct: 235 LPSVDD--MHRKLSSVQLKPTSEDP-RKMAAAANKPKVQKKRASKRGGKQTNVHMTHLLQ 291
Query: 285 NY 286
+Y
Sbjct: 292 DY 293
>gi|342876847|gb|EGU78402.1| hypothetical protein FOXB_11080 [Fusarium oxysporum Fo5176]
Length = 304
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKIE----------VIEGNKYIFKPVFK-I 144
TI +I+D + + ++ K L+ E L+ +P++E + Y+ +P+ +
Sbjct: 100 TITDIIDHLSLRNFDDEHKRQLA-EGLRGHPRVEWKPDANLSEQTWKTGTYVHRPIIPGV 158
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
KD LL L+ G+ + D+++ P CE + L ++ I+ V T+ + + +
Sbjct: 159 KDATSLLAHLQAK--TDASGVSVKDLKDGWPDCEDTISALEREHRILVVRTKKDNIPRYV 216
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPI-------QDHGFKKPV 256
+ ND S + +FQ +W+ + + + +++ L G +P +D KP
Sbjct: 217 WPNDPSLHHKVQPEFQSMWQRVQLPPL--EEMHRKLTSVGQKPTSEDPRKAKDGQANKPK 274
Query: 257 LPGRKKNMNRKKQFKKPRDNEHLADVLENYEAV 289
R+K NR + N H+A ++++Y +
Sbjct: 275 AQKRRKG-NRIGKAT----NVHMAHLMQDYSGM 302
>gi|255716314|ref|XP_002554438.1| KLTH0F05368p [Lachancea thermotolerans]
gi|238935821|emb|CAR24001.1| KLTH0F05368p [Lachancea thermotolerans CBS 6340]
Length = 271
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + ++ + + LL+LL+ Q KGI ++++ P C + + L +N ++
Sbjct: 119 NTLQYVSIYDVHSAEELLQLLRSQVTFKGIS---CKELKDGWPQCTEVIDELESKNRVLV 175
Query: 193 V-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
+ T+ ++ + ++YN + +DEDF K+W +N K+ + E R +QD G
Sbjct: 176 LRTKKDNQPRFVWYNFGGSLGGVDEDFVKMW--------ENCKLPQRGELP--RKLQDLG 225
Query: 252 FKKP-VLPGRKK------NMNRKKQFKKPRDNEHLADVLENY 286
K V P K + ++KQ K N H+A +L++Y
Sbjct: 226 LKPASVDPATVKRGSSRVEVKKRKQRKGKITNTHMAGILKDY 267
>gi|365981349|ref|XP_003667508.1| hypothetical protein NDAI_0A01070 [Naumovozyma dairenensis CBS 421]
gi|343766274|emb|CCD22265.1| hypothetical protein NDAI_0A01070 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + + + + L+KLL+ Q KGI ++++ P C++ + L +++I+
Sbjct: 248 NAFKYVSTYDVHSEGELIKLLRSQVTFKGIS---CKELKDGWPQCDETINELEEESKILV 304
Query: 193 VTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
+ D+ + ++YN+ +DE+F K+W +N ++ ++ E R +QD G
Sbjct: 305 LRTKKDRTPRYVWYNNGGDLHRIDEEFIKMW--------ENVQLPQFSELP--RKLQDLG 354
Query: 252 FK-KPVLPGRKKNMNR-----KKQFKKPRDNEHLADVLENY 286
K V P K R KKQ + N H+A +L+++
Sbjct: 355 LKPASVDPATIKRQTRVEVKKKKQRRGKITNTHMAGILKDF 395
>gi|440493391|gb|ELQ75868.1| Transcription initiation factor IIE, beta subunit
[Trachipleistophora hominis]
Length = 220
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 92 DHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLL 151
D PLT DEI TN NK + + L NPKI VI N +FKP++ I+ K L
Sbjct: 36 DRPLTFDEIEKSTNLKLTDNKRLL----KTLTKNPKI-VIGNNTLLFKPLYNIRSEKDLE 90
Query: 152 KLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYN 206
++ + + GI L+ + +S + + +L + E+I+V + D +++FYN
Sbjct: 91 DIMIATNAE--YGIELEKLLDSPIDIKPFVSNLK-RKEVIFVLKDIDNSEIVFYN 142
>gi|323304044|gb|EGA57823.1| Tfa2p [Saccharomyces cerevisiae FostersB]
Length = 176
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 150 LLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYND 207
LLKLL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 40 LLKLLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNS 96
Query: 208 KSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK-KPVLPGRKKNMNR 266
+DE+F K+W +N ++ ++ E R +QD G K V P K +
Sbjct: 97 GGNLKCIDEEFVKMW--------ENVQLPQFAELP--RKLQDLGLKPASVDPATIKRQTK 146
Query: 267 KKQFKKPRD------NEHLADVLENY 286
+ + KK R N H+ +L++Y
Sbjct: 147 RVEVKKKRQRKGKITNTHMTGILKDY 172
>gi|408394590|gb|EKJ73792.1| hypothetical protein FPSE_06029 [Fusarium pseudograminearum CS3096]
Length = 305
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKI----------EVIEGNKYIFKPVFK-I 144
TI EI+D + + K L+ E L+ +P++ + + Y +P+ +
Sbjct: 101 TITEIIDHLSLRGYDEEHKRQLA-EGLRGHPRVDWKPDANLSEQTWKTGTYAHRPIIPGV 159
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
K+ LL L+ G+ + D+++ P CE + L + +I+ V T+ + + +
Sbjct: 160 KNATTLLGHLQAK--TDASGVSVKDLKDGWPDCEDTISALEREYKILVVRTKKDNLPRYV 217
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKN 263
+ ND S + +FQ +W+ + + + D++ L G +P + K G K
Sbjct: 218 WPNDASLHYKVQPEFQSMWQRVQLPPI--DEMHRKLTSVGQKPTSEDPRKTKEGQGNKPK 275
Query: 264 MNRKKQFKK--PRDNEHLADVLENYEAV 289
+ ++++ + N H+A ++++Y +
Sbjct: 276 VQKRRKGNRIGKATNVHMAHLMQDYSGM 303
>gi|429966187|gb|ELA48184.1| hypothetical protein VCUG_00422 [Vavraia culicis 'floridensis']
Length = 220
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 92 DHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLL 151
D PLT DEI TN NK + + L NPKI VI N +FKP++ I++ K L
Sbjct: 36 DRPLTFDEIEKNTNLKLTDNKKLL----KTLTKNPKI-VIGDNTLLFKPLYNIRNEKDLE 90
Query: 152 KLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYN 206
++ + + GI L+ + +S + +++L + +I+V + D +++FYN
Sbjct: 91 NIMVATNCE--YGIELEKLLDSPIDIKPFVQNLQ-KKAVIFVLKDIDNSEIVFYN 142
>gi|327308826|ref|XP_003239104.1| hypothetical protein TERG_01089 [Trichophyton rubrum CBS 118892]
gi|326459360|gb|EGD84813.1| hypothetical protein TERG_01089 [Trichophyton rubrum CBS 118892]
Length = 280
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 87 HQDGDDHPLTIDEILDETNQLDVGNKV-------KIWLSTEALQNNPKIEVIEGNKYIFK 139
H G D PL +I + G+ + +I S + +Q +P EG + F+
Sbjct: 84 HMKGKDVPLKFSDIESYLSLSRQGHDMGYIHALRRILQSHDKVQYDPAGANGEGT-FQFR 142
Query: 140 PVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPAD 198
P I+ LL+ L+ Q +G I+ E++ EK K L +N + +
Sbjct: 143 PPHNIRSADQLLQHLQSQKTAQGWPTIV-----ETINKLEKEGKLLVTRN------KKDN 191
Query: 199 KRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLP 258
K+++ ND S D +F ++W + + D+ + E LEK GI P H K P
Sbjct: 192 HPKMIWANDPSLSQKFDPEFCQIWEKVKIP--DHQTVMEELEKAGITPTSKHKAAK-ARP 248
Query: 259 GRKKNMNRKKQFKKPRDNEHLADVLENY 286
++ + + ++ K N H+A +L +Y
Sbjct: 249 KVEQKVKKARRSGK-TTNTHMAGILRDY 275
>gi|164426610|ref|XP_957548.2| hypothetical protein NCU03909 [Neurospora crassa OR74A]
gi|16945428|emb|CAB91686.2| related to transcription initiation factor IIE, beta subunit
[Neurospora crassa]
gi|157071405|gb|EAA28312.2| predicted protein [Neurospora crassa OR74A]
Length = 302
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 90 GDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVI----------EGNKYIFK 139
G D P T EIL + L + EA++ +I+ I + Y+ +
Sbjct: 94 GKDEPRTYLEILGHLSGLHWSPSYQEEF-VEAMRRTREIQWIPDPNLSEQTWQSGTYLHR 152
Query: 140 P-VFKIKDRKGLLKLL-KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRP 196
P V ++++ LL L K+ D +G + ++++ P CEKA+ L +++I+ + +
Sbjct: 153 PKVPGVRNKTQLLAYLQKKTDASCVG---VKELKDGWPDCEKAINELEAEHKILVIRVKK 209
Query: 197 ADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPV 256
+ ++ +D S ++D + + +W+ + V G D I + L+ +P + K
Sbjct: 210 EGSPRYVWLDDPSLFHEVDPELKVMWQKVEVPGTDT--IVQRLKAASQKPASEDPRDKMT 267
Query: 257 LPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + R ++ N H+ +L++Y
Sbjct: 268 AAPKAEKKKRAQRRTGKATNTHMEHLLKDY 297
>gi|336466413|gb|EGO54578.1| hypothetical protein NEUTE1DRAFT_49195 [Neurospora tetrasperma FGSC
2508]
gi|350286722|gb|EGZ67969.1| transcription initiation factor IIE, beta subunit [Neurospora
tetrasperma FGSC 2509]
Length = 302
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 90 GDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVI----------EGNKYIFK 139
G D P T EIL + L + EA++ +I+ I + Y+ +
Sbjct: 94 GKDEPRTYLEILGHLSGLHWSPSYQEEF-VEAMRRTREIQWIPDPNLSEQTWQSGTYLHR 152
Query: 140 P-VFKIKDRKGLLKLL-KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRP 196
P V ++++ LL L K+ D +G + ++++ P CEKA+ L +++I+ + +
Sbjct: 153 PKVPGVRNKTQLLAYLQKKTDASCVG---VKELKDGWPDCEKAINELEAEHKILVIRVKK 209
Query: 197 ADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPV 256
+ ++ +D S ++D + + +W+ + V G D I + L+ +P + K
Sbjct: 210 EGSPRYVWLDDPSLFHEVDPELKVMWQKVEVPGTDT--IVQRLKAASQKPASEDPRDKMT 267
Query: 257 LPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + R ++ N H+ +L++Y
Sbjct: 268 AAPKAEKKKRAQRRTGKATNTHMEHLLKDY 297
>gi|46128483|ref|XP_388795.1| hypothetical protein FG08619.1 [Gibberella zeae PH-1]
Length = 305
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 96 TIDEILDETNQLDVGNKVKIWLSTEALQNNPKI----------EVIEGNKYIFKPVFK-I 144
TI EI+D + + K L+ E L+ +P++ + + Y +P+ +
Sbjct: 101 TITEIIDHLSLRGYDEEHKRQLA-EGLRGHPRVDWKPDANLSEQTWKTGTYAHRPIIPGV 159
Query: 145 KDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVM 203
K+ LL L+ G+ + D+++ P CE + L + +I+ V T+ + + +
Sbjct: 160 KNATTLLGHLQAK--TDASGVSVKDLKDGWPDCEDTISALEREYKILVVRTKKDNLPRYV 217
Query: 204 FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKN 263
+ ND S + +FQ +W+ + + + D++ L G +P + K G K
Sbjct: 218 WPNDASLHYKVQPEFQSMWQRVQLPPI--DEMHRKLTSVGQKPTSEDPRKTKDGQGNKPK 275
Query: 264 MNRKKQFKK--PRDNEHLADVLENYEAV 289
+ ++++ + N H+A ++++Y +
Sbjct: 276 VQKRRKGNRIGKATNVHMAHLMQDYSGM 303
>gi|301094131|ref|XP_002997909.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109695|gb|EEY67747.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 390
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 12/120 (10%)
Query: 94 PLTIDEILDETN-QLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLK 152
P+++ +I T L + ++V+ + L+NNPK+ ++G++Y ++ + IK+R LLK
Sbjct: 61 PVSVTDIFKHTGVDLTMDDQVE-----QRLKNNPKVR-LQGDQYAYQAKYDIKNRMQLLK 114
Query: 153 LLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQL 212
+L + G+ ++D+ + + E LK L+ EII + + ADK ++Y+ S L
Sbjct: 115 ILDRIP----EGMPIEDLIDCYVNVEDDLKELTRTGEIICL-KNADKGAEVYYSRGSPYL 169
>gi|269860183|ref|XP_002649814.1| transcription initiation factor IIE, beta subunit [Enterocytozoon
bieneusi H348]
gi|269861692|ref|XP_002650539.1| hypothetical protein EBI_26981 [Enterocytozoon bieneusi H348]
gi|220065985|gb|EED43516.1| hypothetical protein EBI_26981 [Enterocytozoon bieneusi H348]
gi|220066755|gb|EED44227.1| transcription initiation factor IIE, beta subunit [Enterocytozoon
bieneusi H348]
Length = 226
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 33/163 (20%)
Query: 108 DVGNKVKIWLST--EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI 165
+V NK I L+T AL++NP+I+ IE +K + P F I+ ++ ++ +LK+ + GI
Sbjct: 27 EVENKCGIKLATLITALKDNPRIQ-IENDKIYYNPEFLIRTKEDVINILKEKN----EGI 81
Query: 166 LLD-------DVRESLPHCEKALKHLSLQ------------NEIIYVTRPADKRKVMFYN 206
+D DVR+ + EK + + ++ NE I + R D +++F N
Sbjct: 82 EMDRLNDGPIDVRQIMGIVEKKPQQIGVKKRTKITLPPIVTNEFI-ILRDLDGGEIVFLN 140
Query: 207 DKSAQLDLDED----FQKLWRSISVDGMDNDKIKEYLEKQGIR 245
+ L + + + LW +ISV + E+L K G++
Sbjct: 141 ETIPNLPPEGESLNKIKTLWNNISVPNYQT--VLEHLNKAGVK 181
>gi|45185930|ref|NP_983646.1| ACR244Cp [Ashbya gossypii ATCC 10895]
gi|44981720|gb|AAS51470.1| ACR244Cp [Ashbya gossypii ATCC 10895]
Length = 300
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + ++ + + LLKL + Q KGI ++++ P C + + L +N I+
Sbjct: 147 NTLQYVSIYDVHSAEELLKLTRTQVTFKGIS---CKELKDGWPQCFEVIDELEKKNRILV 203
Query: 193 V-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
T+ + + ++YN ++DEDF K+W +N K+ + E R +QD G
Sbjct: 204 SRTKKDNSPRFVWYNFGGPLGEIDEDFVKMW--------ENCKLPQRSELP--RKLQDLG 253
Query: 252 FKKP-VLPGRKKNMN-------RKKQFKKPRDNEHLADVLENY 286
K V P K ++KQ K N H+A +L++Y
Sbjct: 254 LKPASVDPATIKKQGSTRVEAKKRKQRKGKITNTHMAGILKDY 296
>gi|374106852|gb|AEY95761.1| FACR244Cp [Ashbya gossypii FDAG1]
Length = 300
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + ++ + + LLKL + Q KGI ++++ P C + + L +N I+
Sbjct: 147 NTLQYVSIYDVHSAEELLKLTRTQVTFKGIS---CKELKDGWPQCFEVIDELEKKNRILV 203
Query: 193 V-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG 251
T+ + + ++YN ++DEDF K+W +N K+ + E R +QD G
Sbjct: 204 SRTKKDNSPRFVWYNFGGPLGEIDEDFVKMW--------ENCKLPQRSELP--RKLQDLG 253
Query: 252 FKKP-VLPGRKKNMN-------RKKQFKKPRDNEHLADVLENY 286
K V P K ++KQ K N H+A +L++Y
Sbjct: 254 LKPASVDPATIKKQGSTRVEAKKRKQRKGKITNTHMAGILKDY 296
>gi|50302659|ref|XP_451265.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640396|emb|CAH02853.1| KLLA0A05951p [Kluyveromyces lactis]
Length = 286
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 52/310 (16%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSN-- 58
M LL + FK K ++P + RK +KD + +T+ + S+ + N
Sbjct: 1 MSNDLLANLNAFKNKVKTSPALTTRKVLANKD-----RDGQTNGNGKSTEVIEVDDPNSD 55
Query: 59 --NMAYKSMSGSSQYK-FGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKI 115
+M K + SS G L H+ + L E + E + ++++
Sbjct: 56 EKDMPLKKRAKSSSVAPTGQLDST--HLSTKM-------LIATEYIQERGEAVPVDQIES 106
Query: 116 WLSTEALQNNPKIEVIEG-NKYIFKP---------VFKIKDRKGLLKLLK-QHDLKGIGG 164
+LS ++N I +++G K+ F P ++ + + LL+LL+ Q KGI
Sbjct: 107 YLSLP--KDNNVIPMLKGLQKFKFDPKRNTLQYVSIYDVHSAEELLQLLRSQATFKGIS- 163
Query: 165 ILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWR 223
++++ P C + L +N I+ + T+ + + ++YN +DE+F +W
Sbjct: 164 --CKELKDGWPQCFDTIDELEAKNRILVLRTKKDNSPRFVWYNHAGPSRQIDEEFVTMWE 221
Query: 224 SISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKN-MNRKKQFKKPRD------N 276
+ + ++ L+ G++P V P KN +K+ KK R N
Sbjct: 222 ACKLP--QRSELPRKLQDLGLKPAS-------VDPATIKNEQTTRKEVKKRRSRKGKVTN 272
Query: 277 EHLADVLENY 286
H+A +L +Y
Sbjct: 273 THMAGILRDY 282
>gi|336262293|ref|XP_003345931.1| hypothetical protein SMAC_06332 [Sordaria macrospora k-hell]
gi|380089002|emb|CCC13114.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 303
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 90 GDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVI----------EGNKYIFK 139
G D P T EIL + L + EA++ +I+ I + Y+ +
Sbjct: 95 GKDEPRTYLEILGHLSGLHWSPSYQEEF-VEAMRRTREIQWIPDPNLSEQTWQSGTYLHR 153
Query: 140 P-VFKIKDRKGLLKLL-KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRP 196
P V ++++ LL L K+ D +G + ++++ P CEKA+ L +++I+ + +
Sbjct: 154 PKVPGVRNKTQLLAYLQKKTDASCVG---VKELKDGWPDCEKAINELEAEHKILVIRIKK 210
Query: 197 ADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPV 256
+ ++ +D S ++D + + +W+ + V G D I + L+ +P + K
Sbjct: 211 EGLPRYVWLDDPSLFHEVDPELKVMWQKVEVPGTDT--IVQRLKAASQKPASEDPRDKMT 268
Query: 257 LPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+ + R ++ N H+ +L++Y
Sbjct: 269 AAPKAEKKKRAQRRTGKATNTHMEHLLKDY 298
>gi|168040651|ref|XP_001772807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675884|gb|EDQ62374.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 284
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E+L++N K+ +G ++ +K +K++ LL L++ K G+ + D+++S P
Sbjct: 115 ESLKSNVKVS-FDGQRFAYKSKHVLKNKDELLVLVR----KLSEGVPMGDLKDSYPGIAA 169
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKE 237
++ L ++ + + +++ ND + +DED ++L R I + MD ++
Sbjct: 170 DVQDLKASGKVWVLMNSDSQEDIVYPNDPKIDIKVDEDLKQLIRGIDTPREFMD---VER 226
Query: 238 YLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRD-------NEHLADVLENYEA 288
L+K G++P + ++ + G ++ K Q KK R+ N HL ++ ++ +
Sbjct: 227 ELQKAGMKPATNSA-RREAMAGVPRSQIPKPQKKKRRESKRTKYTNAHLPELFKSIDV 283
>gi|348684090|gb|EGZ23905.1| hypothetical protein PHYSODRAFT_325079 [Phytophthora sojae]
Length = 391
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 122 LQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL 181
L+NNPK+ V +G++Y ++ + IK+R LLK+L + G+ ++D+ + E L
Sbjct: 86 LKNNPKVRV-QGDQYAYQAKYDIKNRMQLLKILDRIP----EGMPIEDLIDCYVGVEDDL 140
Query: 182 KHLSLQNEIIYVTRPADKRKVMFYNDKSAQL 212
K L+ EII + + ADK ++Y+ A L
Sbjct: 141 KELTRTGEIICL-KNADKGAEVYYSRGPAFL 170
>gi|398405646|ref|XP_003854289.1| hypothetical protein MYCGRDRAFT_108767 [Zymoseptoria tritici
IPO323]
gi|339474172|gb|EGP89265.1| hypothetical protein MYCGRDRAFT_108767 [Zymoseptoria tritici
IPO323]
Length = 287
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 164 GILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDK-SAQLDLDEDFQKLW 222
GI + ++++ P C A+ L + I+ D M + D S + +D+DF++ W
Sbjct: 162 GIPVKELKDGWPGCIPAIDALEKEGAILVTRLTKDNTPKMVWPDSPSYHVHIDDDFREFW 221
Query: 223 RSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-------D 275
+ + + I+ LEK G+ P + K N+KK K+P
Sbjct: 222 NKTKLPPTETE-IRTELEKAGLTPTSQ-------VKETNKTDNKKKDRKRPNRRGGMKTT 273
Query: 276 NEHLADVLENY 286
N H+ +L++Y
Sbjct: 274 NSHMTGILKDY 284
>gi|407920133|gb|EKG13351.1| hypothetical protein MPH_09633 [Macrophomina phaseolina MS6]
Length = 277
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
Y ++P+ ++ + L LL++ GI + ++++ P +A+ L + EI+ VTR
Sbjct: 124 YRYRPIHNVRSAEQLKGLLQKQ--ASSVGIKVSELKDGWPGAVEAVNELDKKGEIL-VTR 180
Query: 196 PADKRKVM--FYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
+ M + ND S +D++F+ ++ SI + + D ++ LE G++P+
Sbjct: 181 NQKTGQPMLVWQNDPSLAHTIDDEFRTMFLSIPLPP-NPDDMRTRLEAAGLKPVSAPRDV 239
Query: 254 KPVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENY 286
KP+ N +KK+ K PR N H+ +V +Y
Sbjct: 240 KPL-----NNQPQKKKKKAPRKGMKTSNTHMLNVFRDY 272
>gi|156844380|ref|XP_001645253.1| hypothetical protein Kpol_1060p51 [Vanderwaltozyma polyspora DSM
70294]
gi|156115912|gb|EDO17395.1| hypothetical protein Kpol_1060p51 [Vanderwaltozyma polyspora DSM
70294]
Length = 329
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEG-NKYIFKPVFKIKDRKGLLK 152
P+ ++E+LD L + KI E L+ KIE + + + + + LL
Sbjct: 142 PVLLNELLD---YLSITKNDKI---VELLKKLEKIEFDSAKGSFKYMSTYDVHSAQELLN 195
Query: 153 LLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSA 210
LL+ Q KGI ++++ P C++ + L +++I+ + D+ + ++YN+
Sbjct: 196 LLRSQVTFKGIS---CRELKDGWPQCDETINELEEESKILVLRTKKDRTPRYVWYNNGGL 252
Query: 211 QLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK----KPVLPGRKKNMNR 266
+DEDF K+W +I ++ ++ E R +QD G K P R+
Sbjct: 253 LNHIDEDFVKMWENI--------QLPQFSELP--RKLQDLGLKPASVDPATIKRQTTKID 302
Query: 267 KKQFKKPR---DNEHLADVLENY 286
K+ K+ R N H+A +L++Y
Sbjct: 303 IKKKKQRRGKITNTHMAGILKDY 325
>gi|406604153|emb|CCH44376.1| Transcription initiation factor IIE subunit beta [Wickerhamomyces
ciferrii]
Length = 288
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 44/307 (14%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAK-----TSSSSSSSLSSSLG 55
M LL + FK K + P + R+ ++ P +++ K +S + S+L
Sbjct: 1 MSNPLLANLNAFKNKVKTAPVLPSRRPNSTPPPPSQSQSRKPLSSSSSGNKRSALDYDDD 60
Query: 56 SS-------NNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLD 108
N SGS +LA V+++K+R +P+ ID +L + +
Sbjct: 61 DEFDDKPIKNKKPAYDTSGSHLSTKLLLA--VEYIKERV-----NPVPIDTLLSYLSLNN 113
Query: 109 VGNKVKIWLSTEALQN---NPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI 165
K K+ + L NP +E + + IKD+ LL L+Q GI
Sbjct: 114 DEQKSKLLTLVKNLDKIYFNPDDNTLE-----YVSIHNIKDKNDLLIFLRQQ--PTFKGI 166
Query: 166 LLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDL-DEDFQKLWRS 224
+ ++++ C +++ L + I+ + D + + + +L + DE+F KLW +
Sbjct: 167 SVKELKDGWNECIQSINELEEEGSILVLRTKKDNHPRLVWANVGGELGIVDEEFVKLWLN 226
Query: 225 ISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR-----DNEHL 279
+ + D ++ L K+G++P V P KN N + Q K+ + N H+
Sbjct: 227 VKLP--DRSELPGLLNKRGLKPAS-------VDPATVKNTNNEPQKKRKQRKGKITNTHM 277
Query: 280 ADVLENY 286
+L++Y
Sbjct: 278 TGILKDY 284
>gi|388583325|gb|EIM23627.1| hypothetical protein WALSEDRAFT_59300 [Wallemia sebi CBS 633.66]
Length = 275
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 25/150 (16%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
Y ++ F +K + LLK +K + +G G+ ++ ++ES A+ L +NEI+ V R
Sbjct: 110 YSYRHDFPMKSKAELLKHVKGYAPRG--GMRVNLLKESWSGAPAAIDELERENEIV-VLR 166
Query: 196 PADKR--KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFK 253
D + + +F N+ +++ E+F+ LW S++V E + R + D G K
Sbjct: 167 GKDGQGMRTVFENNVKDAIEVQEEFRGLWHSLNVPP----------ESEVARDLDDAGLK 216
Query: 254 KP----VLPGRKKNMNRKKQFKKPR-DNEH 278
+ V P +K +Q K+ R D++H
Sbjct: 217 RTSKTEVAPAKK-----GRQLKQARQDHQH 241
>gi|255728249|ref|XP_002549050.1| hypothetical protein CTRG_03347 [Candida tropicalis MYA-3404]
gi|240133366|gb|EER32922.1| hypothetical protein CTRG_03347 [Candida tropicalis MYA-3404]
Length = 288
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 144 IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKV 202
I+ LL+ L++ G + ++++ P C A+ L +N+I+ + + + ++
Sbjct: 146 IRSADDLLEFLRRQTT--FKGTFVKELKDGWPGCVAAIDELDAENKILVLRNKKENAPRL 203
Query: 203 MFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKK 262
++ N+ +D++F++LW + + D D + + L QG++P G ++ +K+
Sbjct: 204 VWANNGGEMGYIDDEFKELWNEVKLP--DRDVLYQKLLDQGLKPT---GADPSLI--KKQ 256
Query: 263 NMNRKKQFKKPR----DNEHLADVLENY 286
N+ K+ KK R N H+ +L++Y
Sbjct: 257 PQNKDKKQKKARRGKITNTHMKGILKDY 284
>gi|242042027|ref|XP_002468408.1| hypothetical protein SORBIDRAFT_01g045430 [Sorghum bicolor]
gi|241922262|gb|EER95406.1| hypothetical protein SORBIDRAFT_01g045430 [Sorghum bicolor]
Length = 300
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 84/167 (50%), Gaps = 30/167 (17%)
Query: 101 LDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDL 159
++E +D+ GNK ++L+NNPK+ + +G ++ +KP + R LL L+K+ +
Sbjct: 99 VNEATYVDIHGNKAVF----DSLRNNPKV-LFDGTRFSYKPKHILTGRDELLGLIKEKEC 153
Query: 160 KGIGGILLDDVRESLPH----CEKAL-----------KHLSLQNEIIYVTRPADKRKVMF 204
G+ ++D++++ P C +L + L ++ +++ + + +
Sbjct: 154 ----GLPVEDIKDAYPSVLEDCRFSLIWAVIYSIANAEALKASGDVWWLSSTQSQEDMAY 209
Query: 205 YNDKSAQLDLDEDFQKLWRSISV--DGMDNDKIKEYLEKQGIRPIQD 249
+ND + +D D ++L+ + D +D +++ ++K G +P+ +
Sbjct: 210 FNDPRYNITVDNDLKELFLKTELPRDMLD---VEKEIKKSGEKPMTN 253
>gi|453082406|gb|EMF10453.1| transcription initiation factor IIE, beta subunit [Mycosphaerella
populorum SO2202]
Length = 292
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 107 LDVGNKVKIWLSTEALQNNPKIEVIEG-------NKYIFKPVFKIKDRKGLLKLLKQHDL 159
L + + +I L ALQ++ ++E I + ++P + + + L L +
Sbjct: 106 LPIDAQRRIPLIKRALQDSDRVEYIPKKSSANGKESFRYRPKHPVTNAEELKNYLARQ-- 163
Query: 160 KGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSA-QLDLDEDF 218
+ GI + D+++ P C+KA+ L ++ ++ D M + D A +++ +F
Sbjct: 164 QTAQGIPVKDLKDGWPDCQKAIDQLEREHFLLATRNKKDNTAKMIWPDSPACHVEIALEF 223
Query: 219 QKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPR---- 274
+ W + + + ++ LEK I P V R+ +M +KK K+P
Sbjct: 224 RDFWLKTKLPTTEGE-VRNELEKASITPTSQ------VKELRRDHM-KKKDRKRPNRRGG 275
Query: 275 --DNEHLADVLENY 286
N+H+ +L++Y
Sbjct: 276 KTTNQHMVGILKDY 289
>gi|402085977|gb|EJT80875.1| hypothetical protein GGTG_00868 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 293
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 94 PLTIDEIL--------DETNQLDVGNKVKIWLSTEALQNNPKIEVIEG---------NKY 136
P T+D++L DE +V +++ L+ ++ NP+ E G Y
Sbjct: 86 PRTLDDLLAHVGLTRVDERKMREVRDRL---LTHTKVKYNPETEPPAGADPAESWRRGTY 142
Query: 137 IFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-T 194
P +KD LL L+ L+ G+ + D+++ CEKA+ + +++++ V
Sbjct: 143 EHCPTLPGVKDEHALLAHLRS--LRQAQGLAVKDIKDGWADCEKAIDRMEAEHKLLVVRA 200
Query: 195 RPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK 254
+ + ++ +D + D+D++F+ L+ + + + D +++ L + G +P + K
Sbjct: 201 KKGGLARSVWIDDPALNHDVDDEFKILFHRVEMPAAE-DMVRK-LTQVGQKPTSEDPRLK 258
Query: 255 PVLPGRKKNMNRKKQFKKPRDNEHLADVLENY 286
+K+ ++ R N H+A +LE +
Sbjct: 259 IQAVEKKQKKKSARRSGAQRTNTHMAHLLEKF 290
>gi|254581084|ref|XP_002496527.1| ZYRO0D02200p [Zygosaccharomyces rouxii]
gi|238939419|emb|CAR27594.1| ZYRO0D02200p [Zygosaccharomyces rouxii]
Length = 310
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 135 KYIFKPVFKIKDRKGLLKLLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
KYI + + + LL LL+ Q KGI ++++ P C++ + L ++I+ +
Sbjct: 161 KYI--STYDVHSAQELLNLLRSQVTFKGIS---CKELKDGWPQCDETINELEEDSKILVL 215
Query: 194 TRPADKRKVMFYNDKSAQLD-LDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGF 252
D+ + + +LD + EDF +W +N ++ ++ E R +QD G
Sbjct: 216 RTKKDRTPRYVWYNNGPELDRIGEDFVLMW--------ENVQLPQFAELP--RKLQDLGL 265
Query: 253 KKP-VLPGRKKNMNRKKQFKKPRD------NEHLADVLENY 286
K V P K + + KK R N H+A VL++Y
Sbjct: 266 KPASVDPATVKRQTTRVEVKKKRQRRGKITNTHMAGVLKDY 306
>gi|428178930|gb|EKX47803.1| hypothetical protein GUITHDRAFT_106357 [Guillardia theta CCMP2712]
Length = 419
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 120 EALQNNPKI--EVIEGNKYI--FKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 175
+ L+NN I E+ E +Y+ +K + ++ +R+ LL+++ L G+ ++
Sbjct: 254 DTLRNNKFISCELSESGEYVWSYKAMLELSNRQNLLEVI----LNTPCGMKEPSENDAYN 309
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLW-RSISVDGMDNDK 234
E +K L +EI + + ++F K ++ +D+D +KLW + + + ++
Sbjct: 310 GVEGDVKSLKESHEIYAIQNAESRNTLLFPRHKHLEIQVDDDIKKLWEENEPRNQLTQEE 369
Query: 235 IKEYLEKQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHL 279
+ L+++G+ P + +K RK + R+K KK + HL
Sbjct: 370 QEHQLKQEGLIPTKQEKAQKLTGVKRKATVTRRKSAKKMHQHAHL 414
>gi|396492880|ref|XP_003843903.1| hypothetical protein LEMA_P015540.1 [Leptosphaeria maculans JN3]
gi|312220483|emb|CBY00424.1| hypothetical protein LEMA_P015540.1 [Leptosphaeria maculans JN3]
Length = 168
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
Y +KP +I++ L L+ K G+ + D+++ +K + +NE++ V R
Sbjct: 19 YRYKPKLQIRNAAQLKGYLQSQ--KSAMGLSIKDLKDGWATVADDIKLMEDKNEVL-VKR 75
Query: 196 PADK-RKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKK 254
D + ++ ND S ++ +F ++W I++ + D+++ L+ G+ KK
Sbjct: 76 TKDGVARTVWNNDPSMMHPMEPEFAQMWHRIAIPA-NPDELRSALQGAGLVAATQ---KK 131
Query: 255 PVLPGRKKNMNRKKQFKKPR-----DNEHLADVLENYEAV 289
V+ N+ K+ K PR N H+A +L+++ +
Sbjct: 132 EVVA-----TNKNKKAKAPRKNGKQTNTHMAHLLKDFSGM 166
>gi|409075021|gb|EKM75407.1| hypothetical protein AGABI1DRAFT_109474 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193561|gb|EKV43494.1| hypothetical protein AGABI2DRAFT_227224 [Agaricus bisporus var.
bisporus H97]
Length = 238
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 76 LAKIVKHMKQRHQDGDDHPLTIDEILDETNQ-LDVGNKV-KIWLSTEALQNNPKIEVIEG 133
L V H+K H +P+ + +I TN LD + + + + + + +Q +PK ++
Sbjct: 23 LVYAVSHLKSTH-----NPMRLQDIAIVTNTPLDTNHLLLEKFKAHDKVQYDPKTDL--- 74
Query: 134 NKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
Y +K F + + LL +++ KG GI +++S +A++ L + E++ V
Sbjct: 75 --YSYKHEFNFRSKAALLVEIQRQTRKG-SGISARALKDSWKEAPQAIEELEKEGEVL-V 130
Query: 194 TRPA--DKRKVMFYND-----KSAQLDLDEDFQKLWRSISV 227
TR + +++FYN+ + A ++E+F+KLW + V
Sbjct: 131 TRTVKDGQLRMVFYNELKPEEEGAGKLVEEEFRKLWHDLKV 171
>gi|242279722|ref|YP_002991851.1| ABC transporter [Desulfovibrio salexigens DSM 2638]
gi|242122616|gb|ACS80312.1| ABC transporter related [Desulfovibrio salexigens DSM 2638]
Length = 240
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 90 GDDHPLTIDEILDETNQLDVGNKVKIWLS---------TEALQNNPKIEVIEGNKYIFKP 140
G D P DE+LD+ L + ++ ++LS A+ NNPK +++ P
Sbjct: 110 GKDVPKRADELLDQLGILRLADQKAMYLSGGERRRLEIARAMINNPKFILLDEPFAGIDP 169
Query: 141 VFKIKDRKGLLKLLKQHDLKGIGGILLDD--VRESLPHCEKALKHLSLQNEIIYVTRPAD 198
+ I D + ++ LK L GIL+ D VRE+L C++A +L + +I P +
Sbjct: 170 IAVI-DIQDIISTLKDMGL----GILISDHNVRETLSICDRA--YLVYEGRVILNGSPEN 222
Query: 199 KRKVMFYNDKSAQLDLDEDF 218
K N K+ +L L + F
Sbjct: 223 IVK----NTKARRLYLGDSF 238
>gi|345568459|gb|EGX51353.1| hypothetical protein AOL_s00054g423 [Arthrobotrys oligospora ATCC
24927]
Length = 286
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 134 NKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
+ Y FKP+ I+ + LL L+ G+ + ++++ + L I+
Sbjct: 136 DTYAFKPLHNIRSAQQLLTHLQASTTAQ--GLSVKELKDGWSGALATIDELEADGSILVT 193
Query: 194 -TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGF 252
T+ + ++++ NDKS + +D++F+ +W I + ++ LE+ G++P
Sbjct: 194 RTKKDGQARMVWINDKSLNVTIDDEFKTIWEKIVIP--PAAELPGELERAGLKPTS---- 247
Query: 253 KKPVLPGRKKNMNRKKQFKKPR----DNEHLADVLENY 286
P + ++ K+ KKPR N HLA +L +Y
Sbjct: 248 VDPATIKKAMQKDQGKKQKKPRRGRITNTHLAGMLRDY 285
>gi|443915337|gb|ELU36843.1| transcription initiation factor IIE subunit beta [Rhizoctonia
solani AG-1 IA]
Length = 307
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 66 SGSSQYKFGVLAKIVKHMKQRHQDGDDH--PLTIDEILDETNQLDVGNK---VKIWLSTE 120
+GS K L+ ++ +K RH P+ ++++ N +V N VK E
Sbjct: 57 TGSGFQKGTQLSYLISALKVRHCPWLPFRGPIRLEDLGAYANVPNVENDPVLVKALNEHE 116
Query: 121 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 180
+ +PK+++ Y ++P F++KD++ +L + +H +G G+ + ++ES +A
Sbjct: 117 RVTVDPKLKL-----YTWRPDFQVKDKQSVLAEITRH-ARGGAGVSMKSLKESWAGALQA 170
Query: 181 LKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQL 212
++ L + ++ TR A + K++F ND + ++
Sbjct: 171 VEELEKEG-LVLATRSAKDEHIKMVFRNDMTPEM 203
>gi|67480531|ref|XP_655615.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|67482389|ref|XP_656544.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472768|gb|EAL50229.1| hypothetical protein EHI_092400 [Entamoeba histolytica HM-1:IMSS]
gi|56473749|gb|EAL51158.1| hypothetical protein EHI_042180 [Entamoeba histolytica HM-1:IMSS]
Length = 189
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 77 AKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIW--LST--EALQNNPKIEVIE 132
+ IV+H+K+ ++ D I +IL+E DV +++ LST +++ NP + +
Sbjct: 12 SAIVEHLKKNRKEYD-----IKQILNELG-YDVSEGTELFQRLSTMSSSVEYNPVRKTFK 65
Query: 133 GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNE--- 189
+KP + +GL+K++ K + LLDD + P EK L + E
Sbjct: 66 -----YKPKINATNLEGLIKIIHDSKFKSVARSLLDD---AYPDVEKDLASMVEHPEKYD 117
Query: 190 IIYVTRPADKRKVMFYNDKSAQL-----DLDEDFQKLWRSISVDGMDNDKIKEYLEKQGI 244
I+ V +++ F++D +L +LD + W+ +S G ++ ++ ++ G+
Sbjct: 118 IVVVEEGGRSKEIYFFSDPKKRLLNDLPNLDREIVGKWKELS--GTKDEDFEKTVKGSGL 175
Query: 245 RP 246
P
Sbjct: 176 IP 177
>gi|328766434|gb|EGF76488.1| hypothetical protein BATDEDRAFT_92664 [Batrachochytrium
dendrobatidis JAM81]
Length = 275
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 140 PVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADK 199
P +KI+ ++ LL+LLK++ + G+ + ++++S ++ L + I+ + +
Sbjct: 128 PTYKIRSKEDLLELLKKN--RDTTGMEVKELKDSCNGIFGYIEELDAEKSILIIRNRDES 185
Query: 200 RKVMFYNDKSAQLDLDEDFQKLWRSISV 227
++++YN+ +D+ ++F++ W +++
Sbjct: 186 PRIVYYNNNQLHVDICKEFKEYWHQVAL 213
>gi|393219462|gb|EJD04949.1| transcription initiation factor IIE subunit beta [Fomitiporia
mediterranea MF3/22]
Length = 293
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 136 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTR 195
Y ++ F +++ L+ +++H +G GG+ + ++ES +A++ L + E++
Sbjct: 132 YSYRHDFTFRNKAALITEVQRHTRRG-GGLSVRALKESWKDAPQAIEELEKEGEVLVTRT 190
Query: 196 PADKR-KVMFYN-----DKSAQLDLDEDFQKLWRSISV 227
D++ +++F+N + + L ++++F+ LW + V
Sbjct: 191 TKDQQMRMVFWNELKPVEGTGGLPVEQEFKDLWHKLKV 228
>gi|444317755|ref|XP_004179535.1| hypothetical protein TBLA_0C02040 [Tetrapisispora blattae CBS 6284]
gi|387512576|emb|CCH60016.1| hypothetical protein TBLA_0C02040 [Tetrapisispora blattae CBS 6284]
Length = 349
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 134 NKYIFKPVFKIKDRKGLLKLL-KQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIY 192
N + + + + + LL LL KQ KGI ++++ P C++ + L ++I+
Sbjct: 197 NSFKYISTYDVHSPQELLNLLRKQVTFKGIS---CKELKDGWPQCDETINSLEEDSKILV 253
Query: 193 VTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRP 246
+ DK + ++YN+ +DEDF +W ++ + ++ L++ G++P
Sbjct: 254 LRTKKDKTPRYVWYNNGGDLHRIDEDFINMWENVQLPQF--AELPRKLQELGLKP 306
>gi|255080228|ref|XP_002503694.1| predicted protein [Micromonas sp. RCC299]
gi|226518961|gb|ACO64952.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 114 KIWLSTEALQNNPKIE--VIEGNKYI-----FKPVFKIKDRKGLLKLLKQHDLKGIGGIL 166
++W + L +NPKI+ V E + +KP + ++ +L+L+ K G+L
Sbjct: 116 ELW---DMLTHNPKIQQGVHERRTRMEPTISYKPKHVFEGKREMLELVT----KMPDGVL 168
Query: 167 LDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSIS 226
+DDV ++ + L + ++ +T + +V++ D+ + ++D+D L+ ++
Sbjct: 169 MDDVTDAYTGAVDDCEALIAEGLVLMLTNAETRERVLYPVDERYECEVDDDMAALFHAVP 228
Query: 227 VDGMDNDKIKEYLEKQGIRP 246
+ DN+ L K G P
Sbjct: 229 IPEHDNE-FDAALRKAGHEP 247
>gi|242034551|ref|XP_002464670.1| hypothetical protein SORBIDRAFT_01g023100 [Sorghum bicolor]
gi|241918524|gb|EER91668.1| hypothetical protein SORBIDRAFT_01g023100 [Sorghum bicolor]
Length = 273
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 77/152 (50%), Gaps = 26/152 (17%)
Query: 99 EILDETNQLDV-GNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQH 157
E ++E +D+ GNK +++L+NNPK + +K + LL L++
Sbjct: 95 EQINEATYVDIHGNKA----VSDSLRNNPKSK------------HDLKGKDQLLVLIR-- 136
Query: 158 DLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDED 217
K G+ + +++++ P + L+ L E+ ++ + +++ ND ++ +D+D
Sbjct: 137 --KFTEGLAVMEIKDAYPTVMEDLQALKAAGEVWLLSNMDSQEDIVYPNDPKTKMKVDDD 194
Query: 218 FQKLWRSISV--DGMDNDKIKEYLEKQGIRPI 247
+ L+R + D +D +++ L+K GI+P+
Sbjct: 195 LKLLFRETELPRDMVD---VEKELQKNGIKPV 223
>gi|402467891|gb|EJW03118.1| hypothetical protein EDEG_02504 [Edhazardia aedis USNM 41457]
Length = 209
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
M+Y S Q+ + I+ H+++ DHP++ IL +T ++++ I
Sbjct: 1 MSYYSYKKPEQHLNTYIHTIISHVRKY-----DHPVSFASIL-KTYKINLYENPMIL--- 51
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI----LLDDVRESLP 175
+ L+ N KI ++E + +KP + IK + LL LLK + G G+ L+D +P
Sbjct: 52 QLLKKNSKI-IVECDTLQYKPTYDIKSKDDLLTLLKH--VSGETGLEYNELIDGPINVIP 108
Query: 176 HCEKALKHLSLQNEIIYVTRPADKRKVMFYND 207
+++ I++ + D +++F+ND
Sbjct: 109 FINSL-----VESGDIFILKDFDGSQILFHND 135
>gi|393779042|ref|ZP_10367296.1| hypothetical protein HMPREF1321_1996 [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|392610942|gb|EIW93700.1| hypothetical protein HMPREF1321_1996 [Capnocytophaga sp. oral taxon
412 str. F0487]
Length = 1020
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 49/195 (25%)
Query: 96 TIDEILDETNQLDVG----NKVKIWLSTE--ALQNNPKIEVIEGNKYIFKPVFKIKDRKG 149
TIDE+L+ N ++V N+ +W E AL +N + EG +++ FK +K
Sbjct: 816 TIDEMLE--NYVEVAHTFRNRPDLWKKIEEGALSSNAAMR--EGTQHMLS-TFKKNPKKY 870
Query: 150 LLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKS 209
+ ++ D+K G LDD+ P+C + V F N+++
Sbjct: 871 TPENIEHIDMKF--GKALDDI---CPNC---------------------RYDVKFNNNRN 904
Query: 210 AQLDLDEDFQ----KLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGRKKNMN 265
L L E+F+ + W I D + K YL +GI I+D + V+ K N+N
Sbjct: 905 EGLPLFEEFKSYNSETWSKIVNDKGFIQQFKSYLNTEGIEKIEDLAY---VINSNKANIN 961
Query: 266 RKKQ-----FKKPRD 275
KQ FK+ RD
Sbjct: 962 EVKQAFKELFKRNRD 976
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,571,403,651
Number of Sequences: 23463169
Number of extensions: 190882080
Number of successful extensions: 914024
Number of sequences better than 100.0: 506
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 906869
Number of HSP's gapped (non-prelim): 4501
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)