Your job contains 1 sequence.
>psy14236
MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTSSSSSSSLSSSLGSSNNM
AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE
ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA
LKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLE
KQGIRPIQDHGFKKPVLPGRKKNMNRKKQFKKPRDNEHLADVLENYEAVS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14236
(290 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015829 - symbol:TfIIEbeta "Transcription factor I... 871 3.7e-87 1
UNIPROTKB|P29084 - symbol:GTF2E2 "Transcription initiatio... 764 8.1e-76 1
UNIPROTKB|F1MUX7 - symbol:GTF2E2 "General transcription f... 758 3.5e-75 1
UNIPROTKB|Q2KJF9 - symbol:GTF2E2 "General transcription f... 758 3.5e-75 1
UNIPROTKB|E2R5J2 - symbol:GTF2E2 "Uncharacterized protein... 754 9.3e-75 1
MGI|MGI:1915403 - symbol:Gtf2e2 "general transcription fa... 751 1.9e-74 1
ZFIN|ZDB-GENE-030131-6794 - symbol:gtf2e2 "general transc... 731 2.5e-72 1
RGD|1310134 - symbol:Gtf2e2 "general transcription factor... 729 4.1e-72 1
UNIPROTKB|Q5ZIE1 - symbol:GTF2E2 "Uncharacterized protein... 725 1.1e-71 1
UNIPROTKB|F1RX65 - symbol:GTF2E2 "Uncharacterized protein... 562 2.1e-54 1
UNIPROTKB|E5RH41 - symbol:GTF2E2 "Transcription initiatio... 557 7.0e-54 1
WB|WBGene00010054 - symbol:F54D5.11.2 species:6239 "Caeno... 415 7.8e-39 1
UNIPROTKB|G5EG47 - symbol:TFIIE-beta "TFIIE-beta protein"... 415 7.8e-39 1
UNIPROTKB|E5RIW4 - symbol:GTF2E2 "Transcription initiatio... 338 1.1e-30 1
DICTYBASE|DDB_G0287307 - symbol:gtf2e2 "transcription ini... 151 8.9e-09 1
ASPGD|ASPL0000029003 - symbol:AN5498 species:162425 "Emer... 148 2.6e-08 1
POMBASE|SPCC1672.08c - symbol:tfa2 "transcription factor ... 146 4.2e-08 1
TAIR|locus:2133139 - symbol:AT4G21010 species:3702 "Arabi... 134 1.0e-06 1
SGD|S000001770 - symbol:TFA2 "TFIIE small subunit" specie... 120 2.1e-05 2
UNIPROTKB|G4N6W7 - symbol:MGG_06509 "Transcription initia... 123 2.8e-05 1
>FB|FBgn0015829 [details] [associations]
symbol:TfIIEbeta "Transcription factor IIEbeta" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=ISS;IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
EMBL:AE014296 GO:GO:0022008 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 eggNOG:NOG284684
KO:K03137 HSSP:P29084 OMA:LGDQIIF GeneTree:ENSGT00390000011749
UniGene:Dm.2665 GeneID:38527 KEGG:dme:Dmel_CG1276 CTD:38527
FlyBase:FBgn0015829 GenomeRNAi:38527 NextBio:809104 EMBL:U72893
EMBL:BT022197 RefSeq:NP_523923.1 SMR:O96881 IntAct:O96881
MINT:MINT-928529 STRING:O96881 EnsemblMetazoa:FBtr0073234
UCSC:CG1276-RA HOGENOM:HOG000248128 InParanoid:O96881
OrthoDB:EOG45MKN7 Uniprot:O96881
Length = 292
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 174/288 (60%), Positives = 210/288 (72%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXXXXXNNM 60
MDPALLRER+ FKK+A++TPTVEK+ + D P A + +
Sbjct: 1 MDPALLREREAFKKRAMATPTVEKK---SKPDRP--APPPPSDDSRRKMRPPNAPRLDAT 55
Query: 61 AYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTE 120
YK+MSGSSQY+FGVLAKIVK M+ RHQDGDDHPLTIDEILDETNQLD+G VK WL++E
Sbjct: 56 TYKTMSGSSQYRFGVLAKIVKFMRTRHQDGDDHPLTIDEILDETNQLDIGQSVKNWLASE 115
Query: 121 ALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
AL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESLPHCEK
Sbjct: 116 ALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESLPHCEK 175
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
LK+ S EI++V RP DK+K++FYND++A +D++FQKLWRS +VD MD+ KI EYL
Sbjct: 176 VLKNRSA--EILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAMDDAKIDEYL 233
Query: 240 EKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYE 287
EKQGIR +QDHG KK + P PRDNEHLADVLE YE
Sbjct: 234 EKQGIRSMQDHGLKKAI-PKRKKAANKKRQFKKPRDNEHLADVLEVYE 280
>UNIPROTKB|P29084 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0005654 GO:GO:0016032
GO:GO:0006355 EMBL:CH471080 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006368 GO:GO:0006367 Reactome:REACT_1788
GO:GO:0005673 CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 EMBL:S67861 EMBL:X63469 EMBL:AF292062
EMBL:AF292056 EMBL:AF292057 EMBL:AF292058 EMBL:AF292059
EMBL:AF292060 EMBL:AF292061 EMBL:BC030572 IPI:IPI00019981
PIR:S29292 RefSeq:NP_002086.1 UniGene:Hs.77100 PDB:1D8J PDB:1D8K
PDBsum:1D8J PDBsum:1D8K ProteinModelPortal:P29084 SMR:P29084
DIP:DIP-716N IntAct:P29084 MINT:MINT-1894071 STRING:P29084
PhosphoSite:P29084 DMDM:135232 PaxDb:P29084 PeptideAtlas:P29084
PRIDE:P29084 DNASU:2961 Ensembl:ENST00000355904 GeneID:2961
KEGG:hsa:2961 UCSC:uc003xig.3 GeneCards:GC08M030429 HGNC:HGNC:4651
HPA:CAB009603 HPA:HPA025065 MIM:189964 neXtProt:NX_P29084
PharmGKB:PA29037 eggNOG:COG5174 InParanoid:P29084 OMA:LGDQIIF
PhylomeDB:P29084 EvolutionaryTrace:P29084 GenomeRNAi:2961
NextBio:11738 ArrayExpress:P29084 Bgee:P29084 CleanEx:HS_GTF2E2
Genevestigator:P29084 GermOnline:ENSG00000197265 Uniprot:P29084
Length = 291
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 155/292 (53%), Positives = 202/292 (69%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET-SKDEPWKAKKAKTXXXXXXXXXXXXXXXN- 58
MDP+LLRER+LFKK+ALSTP VEKR A + S K KK K N
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 288
>UNIPROTKB|F1MUX7 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
IPI:IPI00694434 UniGene:Bt.20425 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:DAAA02060454 EMBL:DAAA02060453
Ensembl:ENSBTAT00000016863 Uniprot:F1MUX7
Length = 289
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 154/291 (52%), Positives = 202/291 (69%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXXXXXN-N 59
MDP+LLRER+LFKK+ALSTP VEKR +S+ K KKAK N +
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSV-SSEASSSKKKKAKLEHGGSSGSKQNSDHSNGS 59
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 60 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 119
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +K
Sbjct: 120 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQK 178
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL
Sbjct: 179 AVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYL 235
Query: 240 EKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
++QGI +QD G KK NEHLA VL++Y ++
Sbjct: 236 KRQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIA 286
>UNIPROTKB|Q2KJF9 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006367 GO:GO:0005673 EMBL:BC105362 IPI:IPI00694434
RefSeq:NP_001039530.1 UniGene:Bt.20425 ProteinModelPortal:Q2KJF9
SMR:Q2KJF9 STRING:Q2KJF9 PRIDE:Q2KJF9 GeneID:510921 KEGG:bta:510921
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
InParanoid:Q2KJF9 KO:K03137 OrthoDB:EOG470TJ9 NextBio:20869682
Uniprot:Q2KJF9
Length = 289
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 154/291 (52%), Positives = 202/291 (69%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXXXXXN-N 59
MDP+LLRER+LFKK+ALSTP VEKR +S+ K KKAK N +
Sbjct: 1 MDPSLLRERELFKKRALSTPAVEKRSV-SSEASSSKKKKAKLEHGGSSGSKQNSDHSNGS 59
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 60 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMS 119
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E LP+ +K
Sbjct: 120 EALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQK 178
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EYL
Sbjct: 179 AVK--ALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYL 235
Query: 240 EKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
++QGI +QD G KK NEHLA VL++Y ++
Sbjct: 236 KRQGISSMQDSGPKKVAPIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIA 286
>UNIPROTKB|E2R5J2 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:AAEX03010423
RefSeq:XP_003639611.1 ProteinModelPortal:E2R5J2
Ensembl:ENSCAFT00000010484 GeneID:100855770 KEGG:cfa:100855770
NextBio:20851406 Uniprot:E2R5J2
Length = 291
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 154/292 (52%), Positives = 200/292 (68%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET-SKDEPWKAKKAKTXXXXXXXXXXXXXXXN- 58
MDP+LLRER+LFKK+ALSTP VEKR + S K KKAK N
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSVSSESSSSSSKKKKAKLEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SG S YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGGSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
L++QGI +Q+ G KK NEHLA VL++Y ++
Sbjct: 237 LKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIA 288
>MGI|MGI:1915403 [details] [associations]
symbol:Gtf2e2 "general transcription factor II E,
polypeptide 2 (beta subunit)" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
MGI:MGI:1915403 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 OMA:LGDQIIF EMBL:AK007492 EMBL:AK088342
EMBL:AK150415 EMBL:AK153370 EMBL:AK158783 EMBL:BC020016
IPI:IPI00331112 RefSeq:NP_001161393.1 RefSeq:NP_001161394.1
RefSeq:NP_080860.3 UniGene:Mm.286104 UniGene:Mm.490339
ProteinModelPortal:Q9D902 SMR:Q9D902 DIP:DIP-49546N IntAct:Q9D902
MINT:MINT-218577 STRING:Q9D902 PhosphoSite:Q9D902 PaxDb:Q9D902
PRIDE:Q9D902 Ensembl:ENSMUST00000167264 Ensembl:ENSMUST00000170705
Ensembl:ENSMUST00000171010 GeneID:68153 KEGG:mmu:68153
GeneTree:ENSGT00390000011749 InParanoid:Q9D902 NextBio:326546
Bgee:Q9D902 Genevestigator:Q9D902 GermOnline:ENSMUSG00000031585
Uniprot:Q9D902
Length = 292
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 152/293 (51%), Positives = 202/293 (68%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRK--AETSKDEPWKAKKAKTXXXXXXXXXXXXXXXN 58
MDP+LLR+R+LFKK+ALSTP VEKR +E+ K KKAK N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSSKKKKAKVEHGGSSGSKQNSDHNN 60
Query: 59 -NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWL 117
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 GSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWL 120
Query: 118 STEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC 177
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+
Sbjct: 121 MTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNS 179
Query: 178 EKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+E
Sbjct: 180 QKAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEE 236
Query: 238 YLEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
YL++QGI +Q+ G KK NEHLA VL++Y ++
Sbjct: 237 YLKRQGISSMQESGPKKVASIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDIT 289
>ZFIN|ZDB-GENE-030131-6794 [details] [associations]
symbol:gtf2e2 "general transcription factor IIE,
polypeptide 2, beta" species:7955 "Danio rerio" [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 ZFIN:ZDB-GENE-030131-6794
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:BX469934
EMBL:BX908795 EMBL:BC067173 IPI:IPI00502827 RefSeq:NP_997896.1
UniGene:Dr.51 SMR:Q6NXA3 STRING:Q6NXA3 Ensembl:ENSDART00000016488
GeneID:334854 KEGG:dre:334854 InParanoid:Q6NXA3 NextBio:20810573
Uniprot:Q6NXA3
Length = 291
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 152/287 (52%), Positives = 194/287 (67%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXXXXXN-N 59
MDPALLRER+LFKK+ALSTP VEKR A + K KK+K N +
Sbjct: 1 MDPALLRERELFKKRALSTPAVEKRPAASEASGSSKKKKSKPDKESSSSSKNNSDPSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLA+IV +MK RHQ GD HPLT++EILDET LD+G K K WL +
Sbjct: 61 FNLKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGMKQKQWLMS 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP+ K
Sbjct: 121 EALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLPNAAK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +D +KI+EYL
Sbjct: 180 AIK--ALGDQIIFVTRP-DKKKILFYNDKHCQFVVDEEFQKLWRSVPVDSIDEEKIEEYL 236
Query: 240 EKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENY 286
+KQGI +Q+ G KK N+HL VLE+Y
Sbjct: 237 KKQGISSMQETGPKKMTPIQKRKKPGTQRKRRYKTHNDHLNGVLEDY 283
>RGD|1310134 [details] [associations]
symbol:Gtf2e2 "general transcription factor IIE, polypeptide 2,
beta" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 RGD:1310134 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 IPI:IPI00205391
Ensembl:ENSRNOT00000019989 UCSC:RGD:1310134 ArrayExpress:D4A5U4
Uniprot:D4A5U4
Length = 279
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 144/256 (56%), Positives = 189/256 (73%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET-SKDEPWKAKKAKTXXXXXXXXXXXXXXXN- 58
MDP+LLR+R+LFKK+ALSTP VEKR + S K KKAK N
Sbjct: 1 MDPSLLRDRELFKKRALSTPVVEKRAVPSESPSSSSKKKKAKVEHGGSSGSKQNSDHNNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E LP+ +
Sbjct: 121 TEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGLPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEY 238
KA+K +L ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD MD +KI+EY
Sbjct: 180 KAVK--ALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEY 236
Query: 239 LEKQGIRPIQDHGFKK 254
L++QGI +Q+ G KK
Sbjct: 237 LKRQGISSMQESGPKK 252
>UNIPROTKB|Q5ZIE1 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 CTD:2961
eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OrthoDB:EOG470TJ9 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:AADN02016141 EMBL:AADN02016142 EMBL:AJ720843 IPI:IPI00579019
RefSeq:XP_001233400.1 RefSeq:XP_003641238.1 UniGene:Gga.18462
UniGene:Gga.26205 SMR:Q5ZIE1 STRING:Q5ZIE1
Ensembl:ENSGALT00000016727 GeneID:771227 KEGG:gga:771227
InParanoid:Q5ZIE1 NextBio:20921431 Uniprot:Q5ZIE1
Length = 290
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 144/291 (49%), Positives = 199/291 (68%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXXXXXN-N 59
MDP+LLRER+LF+K ALSTP VEKR A +++ K KK K N +
Sbjct: 1 MDPSLLRERELFRKHALSTPAVEKRPAPSAEPSSSKKKKVKVEQGGPSSSKQSSDHSNGS 60
Query: 60 MAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLST 119
K++SGSS YKFGVLAKIV +MK RHQ GD HPLT++EILDET LD+G K K WL
Sbjct: 61 FNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMN 120
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
EAL NNPKIEV++G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E LP+ K
Sbjct: 121 EALVNNPKIEVVDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGLPNAHK 179
Query: 180 ALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYL 239
A+K +L ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +D DK++EYL
Sbjct: 180 AIK--ALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSIDEDKVEEYL 236
Query: 240 EKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
++QGI +++ G +K + P N+HLA VL++Y V+
Sbjct: 237 KRQGISSMREAGPRK-IAPAQRKKPTSQKKRRFKTHNDHLAGVLKDYSDVT 286
>UNIPROTKB|F1RX65 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
GO:GO:0005673 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:FP236445 EMBL:CU855604 EMBL:FP236189
Ensembl:ENSSSCT00000017253 Uniprot:F1RX65
Length = 209
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 111/210 (52%), Positives = 150/210 (71%)
Query: 83 MKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVF 142
MK RHQ GD HPLT++EILDET LD+G K K WL TEAL NNPKIEVI+G KY FKP +
Sbjct: 1 MKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDG-KYAFKPKY 59
Query: 143 KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKV 202
+KD+K LL+LL +HD +G+GGILL+D+ E LP+ +KA+K +L ++I++V RP DK+K+
Sbjct: 60 NLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQKAVK--ALGDQILFVNRP-DKKKI 116
Query: 203 MFYNDKSAQLDLDE--DFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHGFKKPVLPGX 260
+F+NDKS Q +DE +FQKLWRS++VD MD +KI+EYL++QGI +Q+ G KK
Sbjct: 117 LFFNDKSCQFSVDEGTEFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQR 176
Query: 261 XXXXXXXXXXXXPRDNEHLADVLENYEAVS 290
NEHLA VL++Y ++
Sbjct: 177 RKKPASQKKRRFKTHNEHLAGVLKDYSDIA 206
>UNIPROTKB|E5RH41 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
EMBL:AC103959 EMBL:AC102945 GO:GO:0005673 HGNC:HGNC:4651
IPI:IPI01016053 ProteinModelPortal:E5RH41 SMR:E5RH41
Ensembl:ENST00000518599 ArrayExpress:E5RH41 Bgee:E5RH41
Uniprot:E5RH41
Length = 198
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 115/202 (56%), Positives = 145/202 (71%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET-SKDEPWKAKKAKTXXXXXXXXXXXXXXXN- 58
MDP+LLRER+LFKK+ALSTP VEKR A + S K KK K N
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 178
TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+LP+ +
Sbjct: 121 TEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQ 179
Query: 179 KALKHLSLQNEIIYVTRPADKR 200
KA+K +L ++I++V RP DK+
Sbjct: 180 KAVK--ALGDQILFVNRP-DKK 198
>WB|WBGene00010054 [details] [associations]
symbol:F54D5.11.2 species:6239 "Caenorhabditis elegans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA;IDA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA;IPI] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988 EMBL:Z66513
GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 104/296 (35%), Positives = 158/296 (53%)
Query: 1 MDPALLRERDLFKKKALST------PTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXX 54
MDP LLR+R F+K A +T PT T E KAKK K+
Sbjct: 1 MDPELLRQRTAFQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQNLSKLPD 60
Query: 55 XXXNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVK 114
NN + + S+ F +AKIV +MK+RH + PLT+ EILDE D+ +
Sbjct: 61 F--NNSVSNANALSNATNFSTMAKIVDYMKKRHLNNQQWPLTLQEILDELQIFDLSKRSL 118
Query: 115 IWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 174
+L EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E +
Sbjct: 119 AFLQ-EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECV 176
Query: 175 PHCEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMD 231
+ + L+ +S +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD +D
Sbjct: 177 ANYDALLQQVS--SEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHLD 234
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + NEH+ VLE+YE
Sbjct: 235 EKKIEEYLQKKGLDAMKDLT-PKVRMQAPLKRKAAKRRFNQKVQNEHMDGVLEDYE 289
>UNIPROTKB|G5EG47 [details] [associations]
symbol:TFIIE-beta "TFIIE-beta protein" species:6239
"Caenorhabditis elegans" [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IDA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988
EMBL:Z66513 GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 104/296 (35%), Positives = 158/296 (53%)
Query: 1 MDPALLRERDLFKKKALST------PTVEKRKAETSKDEPWKAKKAKTXXXXXXXXXXXX 54
MDP LLR+R F+K A +T PT T E KAKK K+
Sbjct: 1 MDPELLRQRTAFQKHAATTMAVQNKPTTAPNSHTTYSSEAAKAKKKKSSGPAQNLSKLPD 60
Query: 55 XXXNNMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVK 114
NN + + S+ F +AKIV +MK+RH + PLT+ EILDE D+ +
Sbjct: 61 F--NNSVSNANALSNATNFSTMAKIVDYMKKRHLNNQQWPLTLQEILDELQIFDLSKRSL 118
Query: 115 IWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 174
+L EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E +
Sbjct: 119 AFLQ-EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECV 176
Query: 175 PHCEKALKHLSLQNEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGMD 231
+ + L+ +S +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD +D
Sbjct: 177 ANYDALLQQVS--SEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHLD 234
Query: 232 NDKIKEYLEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYE 287
KI+EYL+K+G+ ++D K + NEH+ VLE+YE
Sbjct: 235 EKKIEEYLQKKGLDAMKDLT-PKVRMQAPLKRKAAKRRFNQKVQNEHMDGVLEDYE 289
>UNIPROTKB|E5RIW4 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
EMBL:AC103959 EMBL:AC102945 GO:GO:0005673 HGNC:HGNC:4651
IPI:IPI00984666 ProteinModelPortal:E5RIW4 SMR:E5RIW4
Ensembl:ENST00000518445 ArrayExpress:E5RIW4 Bgee:E5RIW4
Uniprot:E5RIW4
Length = 126
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 73/126 (57%), Positives = 83/126 (65%)
Query: 1 MDPALLRERDLFKKKALSTPTVEKRKAET-SKDEPWKAKKAKTXXXXXXXXXXXXXXXN- 58
MDP+LLRER+LFKK+ALSTP VEKR A + S K KK K N
Sbjct: 1 MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVEHGGSSGSKQNSDHSNG 60
Query: 59 NMAYKSMSGSSQYKFGVLAKIVKHMKQRHQDGDDHPLTIDEILDETNQLDVGNKVKIWLS 118
+ K++SGSS YKFGVLAKIV +MK RHQ GD HPLT+DEILDET LD+G K K WL
Sbjct: 61 SFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLM 120
Query: 119 TEALQN 124
TEAL N
Sbjct: 121 TEALVN 126
>DICTYBASE|DDB_G0287307 [details] [associations]
symbol:gtf2e2 "transcription initiation factor IIE2"
species:44689 "Dictyostelium discoideum" [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
dictyBase:DDB_G0287307 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000154_GR EMBL:AAFI02000100 GO:GO:0006367
GO:GO:0005673 eggNOG:NOG284684 KO:K03137 RefSeq:XP_637225.1
HSSP:P29084 STRING:Q54KJ8 EnsemblProtists:DDB0266450 GeneID:8626056
KEGG:ddi:DDB_G0287307 OMA:TNTHIEN ProtClustDB:CLSZ2742986
Uniprot:Q54KJ8
Length = 276
Score = 151 (58.2 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGN-KYIFKPVFKIKDRKGLLK 152
P EI+ TN + + +K +I E L+NN KI + GN ++ FKP F ++ ++ +L
Sbjct: 86 PADTKEIMHSTNHM-IDDKPEI---LELLRNNEKI-IDHGNDRFSFKPKFNVRTQRDILD 140
Query: 153 LLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQL 212
LL + GGIL+ ++ ES + E +K L +I + ++F ND+ ++
Sbjct: 141 LLPNYP----GGILVSELAESYNNAESDVKKLKETKQIFAIKAAESACDIIFPNDERLRV 196
Query: 213 DLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQ 248
L + +W+SI + + D KE ++ G+ ++
Sbjct: 197 PLSSELVDMWKSIKLPN-EADLEKE-MKDAGLSVVE 230
>ASPGD|ASPL0000029003 [details] [associations]
symbol:AN5498 species:162425 "Emericella nidulans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005673
"transcription factor TFIIE complex" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 EMBL:BN001305 GO:GO:0003743
GO:GO:0006367 EMBL:AACD01000094 GO:GO:0005673 KO:K03137
eggNOG:COG5174 HOGENOM:HOG000216656 OrthoDB:EOG4NGKWS OMA:KDGWPQC
RefSeq:XP_663102.1 STRING:Q5B1T2 EnsemblFungi:CADANIAT00003589
GeneID:2871788 KEGG:ani:AN5498.2 Uniprot:Q5B1T2
Length = 293
Score = 148 (57.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 120 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 179
E +Q +P EG + F+P I+ + LL+ L Q G+G + + ++RE P+ E
Sbjct: 127 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKL-QSQSTGVG-MSVRELREGWPNVED 183
Query: 180 ALKHLSLQNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKE 237
+ L + +++ VTR D K+++ ND S D++F+++W I + + +KE
Sbjct: 184 TINKLEKEGKLL-VTRNKKDDHAKMVWANDPSLIQHFDDEFKQIWEKIKIP--EQQVVKE 240
Query: 238 YLEKQGIRPIQDHGFKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENY 286
LEK GI P + KP P N H+ VL +Y
Sbjct: 241 ELEKAGITPTNKNKVIKP-RPKVEHKKVKKPRRSGKTTNTHMMGVLRDY 288
>POMBASE|SPCC1672.08c [details] [associations]
symbol:tfa2 "transcription factor TFIIE beta subunit,
TFIIEB, Tfa2" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IDA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 PomBase:SPCC1672.08c
GO:GO:0005730 GO:GO:0006355 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003677 GO:GO:0051290 GO:GO:0006367 GO:GO:0000991
GO:GO:0005673 KO:K03137 EMBL:AB176673 EMBL:AB000475 PIR:T41052
RefSeq:NP_587879.1 IntAct:P79011 STRING:P79011
EnsemblFungi:SPCC1672.08c.1 GeneID:2539236 KEGG:spo:SPCC1672.08c
HOGENOM:HOG000216656 OMA:RCQSSLA OrthoDB:EOG4NGKWS NextBio:20800406
Uniprot:P79011
Length = 285
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 99 EILDETNQLDVGNKVKIWLST-------EALQNNPKIEVIEGNK-YIFKPVFKIKDRKGL 150
E L E N+ ++ +LST L+ N +I E N+ + FKP+ I+ GL
Sbjct: 88 EYLKERNEPKTAEEIASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPLHNIRSGAGL 147
Query: 151 LKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV-TRPADKRKVMFYNDKS 209
L L K G+ + ++R+ P+ L+ L Q E++ + TR K+++ NDKS
Sbjct: 148 LAYLDSQ--KTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKMVWRNDKS 205
Query: 210 AQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRP 246
+D++FQ++W I + D E L K G++P
Sbjct: 206 CDCHVDKEFQQVWHEIPIPPT-LDLASE-LGKYGLKP 240
>TAIR|locus:2133139 [details] [associations]
symbol:AT4G21010 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 PIRSF:PIRSF016398
PROSITE:PS51351 EMBL:CP002687 EMBL:AL080282 EMBL:AL161554
GO:GO:0003743 GO:GO:0006367 GO:GO:0005673 KO:K03137 EMBL:AY133707
IPI:IPI00528608 PIR:T10643 RefSeq:NP_193833.1 UniGene:At.32675
ProteinModelPortal:Q9SUB3 STRING:Q9SUB3 EnsemblPlants:AT4G21010.1
GeneID:827848 KEGG:ath:AT4G21010 TAIR:At4g21010
HOGENOM:HOG000243420 InParanoid:Q9SUB3 OMA:NAHMPEL PhylomeDB:Q9SUB3
ProtClustDB:CLSN2685336 Genevestigator:Q9SUB3 Uniprot:Q9SUB3
Length = 275
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/148 (25%), Positives = 77/148 (52%)
Query: 99 EILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHD 158
E ++E +D+ N ++ ++L+ NPK+ +G ++ +K IKD+K LL + + D
Sbjct: 91 EQINEACYVDMHNNKAVF---DSLRKNPKVHY-DGRRFSYKATHNIKDKKQLLSFVNKSD 146
Query: 159 LKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKRKVMFYNDKSAQLDLDEDF 218
K I + D++++ P+ + LK L EI ++ D ++ Y + +D++
Sbjct: 147 -KVID---VSDLKDAYPNVMEDLKSLKSSGEIFWLLSNTDSKEGTVYRNNMEYPKIDDEL 202
Query: 219 QKLWRSISVDGMDNDKIKEYLEKQGIRP 246
+ L+R I M ++++ L K G++P
Sbjct: 203 KALFRDIIPSDML--EVEKELLKIGLKP 228
>SGD|S000001770 [details] [associations]
symbol:TFA2 "TFIIE small subunit" species:4932 "Saccharomyces
cerevisiae" [GO:0001097 "TFIIH-class transcription factor binding"
evidence=IDA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA;IDA;IPI] [GO:0000993 "RNA polymerase II core binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 SGD:S000001770 GO:GO:0006355
GO:GO:0003677 EMBL:BK006944 GO:GO:0006366 GO:GO:0006367
GO:GO:0005673 KO:K03137 eggNOG:COG5174 GeneTree:ENSGT00390000011749
HOGENOM:HOG000216656 OrthoDB:EOG4NGKWS EMBL:U12824 EMBL:Z28287
PIR:S38138 RefSeq:NP_012988.1 ProteinModelPortal:P36145
DIP:DIP-1701N IntAct:P36145 MINT:MINT-411389 STRING:P36145
PaxDb:P36145 PeptideAtlas:P36145 EnsemblFungi:YKR062W GeneID:853936
KEGG:sce:YKR062W OMA:KDGWPQC NextBio:975315 Genevestigator:P36145
GermOnline:YKR062W Uniprot:P36145
Length = 328
Score = 120 (47.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 35/156 (22%), Positives = 76/156 (48%)
Query: 94 PLTIDEILDETNQLDVGNKVKIWLSTEALQNNPKIEVIEGN-KYIFKPVFKIKDRKGLLK 152
P+ ++E+LD + +++ + ++ +PK +G KY+ + + LLK
Sbjct: 141 PVLVNELLDYLSMKKDDKVIELLKKLDRIEFDPK----KGTFKYL--STYDVHSPSELLK 194
Query: 153 LLK-QHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYVTRPADKR-KVMFYNDKSA 210
LL+ Q KGI D+++ P C++ + L ++I+ + DK + ++YN
Sbjct: 195 LLRSQVTFKGIS---CKDLKDGWPQCDETINQLEEDSKILVLRTKKDKTPRYVWYNSGGN 251
Query: 211 QLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRP 246
+DE+F K+W ++ + ++ L+ G++P
Sbjct: 252 LKCIDEEFVKMWENVQLPQFA--ELPRKLQDLGLKP 285
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 2 DPALLRERDLFKKKALSTPTVEKRKAETSK 31
DP LL + FK K S P + K K
Sbjct: 6 DP-LLANLNAFKSKVKSAPVIAPAKVGQKK 34
>UNIPROTKB|G4N6W7 [details] [associations]
symbol:MGG_06509 "Transcription initiation factor IIE
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003166 InterPro:IPR016656
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0003743 GO:GO:0043581
GO:GO:0006367 EMBL:CM001234 GO:GO:0005673 KO:K03137
RefSeq:XP_003717050.1 EnsemblFungi:MGG_06509T0 GeneID:2684664
KEGG:mgr:MGG_06509 Uniprot:G4N6W7
Length = 310
Score = 123 (48.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/158 (21%), Positives = 73/158 (46%)
Query: 135 KYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKALKHLSLQNEIIYV 193
KY P+ +KD LL+ L + K G+ + D+++ P C++ + L ++++ V
Sbjct: 155 KYEHLPIIPGVKDETSLLRYLSER--KTAQGVSVKDLKDGWPSCDETITKLEKAHKLLVV 212
Query: 194 -TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMDNDKIKEYLEKQGIRPIQDHG- 251
T+ + ++ +D S D+D +F+ +W + V ++ D +++ L G +P D
Sbjct: 213 RTKKDGVARTVWIDDPSLHHDVDAEFKLMWHRVEVPPLE-DIVRK-LAAAGQKPTSDDPQ 270
Query: 252 FKKPVLPGXXXXXXXXXXXXXPRDNEHLADVLENYEAV 289
K + N H+A +L+N++ +
Sbjct: 271 LKVHAVAKDTKKNKKRAVNIKKMTNVHMAGLLKNFDHI 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 290 262 0.00091 114 3 11 23 0.39 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 599 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.52u 0.10s 23.62t Elapsed: 00:00:01
Total cpu time: 23.52u 0.10s 23.62t Elapsed: 00:00:01
Start: Thu Aug 15 15:17:20 2013 End: Thu Aug 15 15:17:21 2013