Query psy14237
Match_columns 360
No_of_seqs 215 out of 1375
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 22:54:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1csh_A Citrate synthase; lyase 100.0 2.7E-87 9.4E-92 676.5 33.6 308 2-309 126-433 (435)
2 3msu_A Citrate synthase; helix 100.0 1.2E-83 4.2E-88 647.2 21.6 281 2-305 130-424 (427)
3 2h12_A Citrate synthase; acido 100.0 1.1E-82 3.9E-87 642.7 26.0 284 2-305 129-427 (436)
4 3l96_A Citrate synthase; quate 100.0 2E-83 6.7E-88 646.0 14.6 286 1-306 120-418 (426)
5 2p2w_A Citrate synthase; trans 100.0 6.3E-82 2.2E-86 625.9 24.8 274 2-305 81-354 (367)
6 3hwk_A Methylcitrate synthase; 100.0 1.5E-81 5.1E-86 630.0 24.3 276 2-306 128-408 (414)
7 2c6x_A Citrate synthase 1; tri 100.0 3E-81 1E-85 620.1 24.6 278 2-304 80-359 (363)
8 3tqg_A 2-methylcitrate synthas 100.0 1.8E-81 6.1E-86 623.6 21.5 275 2-306 86-366 (375)
9 1iom_A Citrate synthase; open 100.0 8E-80 2.7E-84 612.8 30.3 281 2-305 82-367 (377)
10 3o8j_A 2-methylcitrate synthas 100.0 5.4E-81 1.9E-85 624.7 21.6 279 2-306 112-395 (404)
11 1o7x_A Citrate synthase; lyase 100.0 8.7E-81 3E-85 619.7 22.5 278 2-304 83-367 (377)
12 2ibp_A Citrate synthase; disul 100.0 3E-80 1E-84 621.1 26.4 286 2-304 101-399 (409)
13 1vgm_A 378AA long hypothetical 100.0 4E-80 1.4E-84 615.1 25.1 279 2-305 84-369 (378)
14 1aj8_A Citrate synthase; hyper 100.0 7.9E-80 2.7E-84 611.7 26.4 279 2-304 80-360 (371)
15 1a59_A Citrate synthase; cold- 100.0 1.1E-79 3.6E-84 612.4 27.1 282 2-304 84-373 (378)
16 2ifc_A Citrate synthase; oxalo 100.0 4.8E-80 1.7E-84 615.8 23.5 280 2-305 87-375 (385)
17 1vgp_A 373AA long hypothetical 100.0 4.5E-80 1.5E-84 613.9 22.3 275 2-304 82-363 (373)
18 4ay7_A Methylcobalamin\: coenz 28.1 62 0.0021 30.5 5.0 43 171-213 302-345 (348)
No 1
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=2.7e-87 Score=676.55 Aligned_cols=308 Identities=77% Similarity=1.283 Sum_probs=286.3
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|+++++|+..|+++.++..+|++.++++++||||+|+|+|++||+++.+|.++++|++++
T Consensus 126 i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~~~~~~~~~~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~l 205 (435)
T 1csh_A 126 LDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKL 205 (435)
T ss_dssp HHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTS
T ss_pred HHhCCccCChHHHHHHHHHHHhhcccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCC
Confidence 56799999999999999999999988887777665555678999999999999999999999997654454677999999
Q ss_pred CHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHHHH
Q psy14237 82 DWSANFTSMLGFDNHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWLKK 161 (360)
Q Consensus 82 s~a~nfl~ml~g~~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l~~ 161 (360)
||++|||+||+++++.++++||++||||||||++|+||||+||++||++|+|+||+|||++|+||+||||||+|++||++
T Consensus 206 s~a~nfl~ml~~p~~~~~~~ld~~LiLhADHeg~N~STftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~ 285 (435)
T 1csh_A 206 DWSHNFTNMLGYTDPQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQ 285 (435)
T ss_dssp CHHHHHHHHHTCCCHHHHHHHHHHHHHTSCCCSCSHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCChHHHHHHHHHHHHccCCCCCchHHHHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHH
Confidence 99999999999989999999999999999995589999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhCCCChHHHHHHHHHHhcchhHHhhCCC
Q psy14237 162 LQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHLPDDSLFKLVSQVYKVVPPVLIETGKV 241 (360)
Q Consensus 162 i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~~~~~~~~~ 241 (360)
+.++||++.+++++++||++.+++|++||||||||||+.|||+++|+++++++.+++++++++.+||+++.+++.++++.
T Consensus 286 i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVyk~~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~ 365 (435)
T 1csh_A 286 LQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKA 365 (435)
T ss_dssp HHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSCCSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCCCHHHHHHHHHHHHhcCCceecCCccccCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 98888865568999999999999999999999999999999999999999998778999999999999998877788889
Q ss_pred CCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHHHHhh
Q psy14237 242 KNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLVKQYS 309 (360)
Q Consensus 242 k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~~~~~ 309 (360)
|+++||||||+|++|++||||+.++||+||++||++||+||++||+.++.+|+||+|+||+...+.++
T Consensus 366 k~l~pNVDf~sg~i~~~lGipp~~~ft~lFaisR~~Gw~AH~~Eq~~~~~~I~RP~~~y~~~~~~~~~ 433 (435)
T 1csh_A 366 KNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTAGLEKLSA 433 (435)
T ss_dssp SCCSBCTHHHHHHHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHC
T ss_pred CCCCCChHHHHHHHHHHcCCChhhcccchhhhhhhHHHHHHHHHHHhcCCCCcCcHHHhhHHHHHHhc
Confidence 99999999999999999999546999999999999999999999999987899999999999987764
No 2
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=1.2e-83 Score=647.22 Aligned_cols=281 Identities=29% Similarity=0.442 Sum_probs=251.0
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|++++. + ..+|++.+++++|||||+|+|+|++||+ +.|+++++|++++
T Consensus 130 i~~~p~~~hPM~~L~~~v~aL~~~~~------~----~~~~~~~~~~a~rLiAk~pti~a~~yr~--~~G~~~~~p~~~l 197 (427)
T 3msu_A 130 IAAMPQHTHPMSSLIAGVNVLAAEHI------H----NGQKESQDEVAKNIVAKIATIAAMAYRH--NHGKKFLEPKMEY 197 (427)
T ss_dssp HHHSCTTCCHHHHHHHHHHHHHHHHH------H----TTSCCCHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCCCCCHHHHHHHHHHHHhhhcc------C----CCCHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCcc
Confidence 57899999999999999999987541 1 1237888999999999999999999995 6899999999999
Q ss_pred CHHHHHHHHhCCC------CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHH
Q psy14237 82 DWSANFTSMLGFD------NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEV 155 (360)
Q Consensus 82 s~a~nfl~ml~g~------~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v 155 (360)
||++|||+||++. +|.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|
T Consensus 198 s~a~NfL~ml~~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysavaAgi~aL~GPlHGGAne~v 276 (427)
T 3msu_A 198 GYAENFLYMMFADDESYKPDELHIKAMDTIFMLHADHE-QNASTSTVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAV 276 (427)
T ss_dssp CHHHHHHHHHHCSSTTCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHH
T ss_pred CHHHHHHHHHhcccccCCCCHHHHHHHHHHHhhccCCC-CChhHHHHHHHHccCCCHHHHHHHHHHHccCCccCCHHHHH
Confidence 9999999999774 8899999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcchhHHHHHHHHHHhCCC--cccccCCCCCCCCCCcHHHHHHHHHhh-----CCCChHHHHHHHHH
Q psy14237 156 LIWLKKLQQQVGDNVSEEKLKEFIWNTLKSGQ--VVPGYGHAVLRKTDPRYTCQREFAQKH-----LPDDSLFKLVSQVY 228 (360)
Q Consensus 156 ~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~g~--~IpGFGHrvYk~~DPRa~~L~~~a~~~-----~~~~~~~~~a~~le 228 (360)
++||+++ + +++++++||++.+++|+ +||||||||||+.|||+++|+++|+++ ..++++++++.++|
T Consensus 277 ~~ml~ei----~---~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk~~DPRa~~Lk~~a~~l~~~~g~~~~~~~~la~~le 349 (427)
T 3msu_A 277 LKMLSEI----G---STENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLE 349 (427)
T ss_dssp HHHHHHH----C---STTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHHHHHTHHHHHHGGGCSSHHHHHHHHHH
T ss_pred HHHHHHh----c---CchHHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999876 4 46899999999999999 999999999999999999999998775 22689999999999
Q ss_pred HhcchhHHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcC-CCcccCccccchhHH
Q psy14237 229 KVVPPVLIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALG-LPIERPKSLSTNDLV 305 (360)
Q Consensus 229 ~~~~~~~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~-~~i~RP~~~y~g~~~ 305 (360)
+++.+ +++++.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ ++|+||++.|+|+..
T Consensus 350 ~~a~~--d~~~~~k~l~pNVDfysg~i~~~lGip-~~~ft~lFaisR~~Gw~AH~~Eq~~~p~~rI~RPr~~Y~G~~~ 424 (427)
T 3msu_A 350 EIALQ--DEFFIERKLFSNVDFYSGIILKAMGIP-EDMFTAIFALARTSGWISQWIEMVNDPAQKIGRPRQLYTGATN 424 (427)
T ss_dssp HHHC--------CCCCCBCHHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCCEEEECSCCS
T ss_pred HHHhh--cccccccCCCCChHHHHHHHHHHcCCC-ccccceehhHHhHHHHHHHHHHHHhCCCCceeCCCceecCCCC
Confidence 99976 568888999999999999999999998 599999999999999999999999873 789999999999764
No 3
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=1.1e-82 Score=642.73 Aligned_cols=284 Identities=30% Similarity=0.420 Sum_probs=254.7
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
+++||+++|||++|+++|++|+++++. ..+.. +.++.+++++|||||+|+|+|++||+ +.|+++++|++++
T Consensus 129 ~~~~p~~~hPM~~l~~~v~aL~~~~~~------~~~~~-~~~~~~~~a~rLiAk~ptiaa~~yr~--~~g~~~~~p~~~l 199 (436)
T 2h12_A 129 FNGFRRDAHPMAILCGTVGALSAFYPD------ANDIA-IPANRDLAAMRLIAKIPTIAAWAYKY--TQGEAFIYPRNDL 199 (436)
T ss_dssp HTTSCTTCCHHHHHHHHHHHHGGGCC---------------CCHHHHHHHHHHHHHHHHHHHHHH--HHTCCCCCCCTTS
T ss_pred HHhCCCCCCHHHHHHHHHHHHhhcCcc------cccCC-CHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCCCC
Confidence 578999999999999999999986542 11212 24678899999999999999999995 5788899999999
Q ss_pred CHHHHHHHHhCC-------CCHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHH
Q psy14237 82 DWSANFTSMLGF-------DNHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQE 154 (360)
Q Consensus 82 s~a~nfl~ml~g-------~~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~ 154 (360)
||++|||+|+++ +++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+
T Consensus 200 s~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiLhADHe-~NaSTftaRvvaSt~ad~ysaiaAgi~aL~GPlHGGAne~ 278 (436)
T 2h12_A 200 NYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHE-QNASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEA 278 (436)
T ss_dssp CHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHH
T ss_pred CHHHHHHHHhcCCCCccCCCCHHHHHHHHhhheeecCCC-CchHHHHHHHHHhcCccHHHHHHHHHHhcCCCccCCHHHH
Confidence 999999999976 47899999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcchhHHHHHHHHHHhCC--CcccccCCCCCCCCCCcHHHHHHHHHhh---CC--CChHHHHHHHH
Q psy14237 155 VLIWLKKLQQQVGDNVSEEKLKEFIWNTLKSG--QVVPGYGHAVLRKTDPRYTCQREFAQKH---LP--DDSLFKLVSQV 227 (360)
Q Consensus 155 v~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~g--~~IpGFGHrvYk~~DPRa~~L~~~a~~~---~~--~~~~~~~a~~l 227 (360)
|++||++| + +++++++||++.++++ ++||||||||||+.|||+++|+++++++ .+ ++++++++.++
T Consensus 279 v~~ml~ei----~---~~~~v~~~i~~~l~~~~g~~imGFGHrVYk~~DPRa~iLk~~a~~l~~~~g~~~~~~~~la~~l 351 (436)
T 2h12_A 279 VLKMLARI----G---KKENIPAFIAQVKDKNSGVKLMGFGHRVYKNFDPRAKIMQQTCHEVLTELGIKDDPLLDLAVEL 351 (436)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHHCTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHh----c---CchHHHHHHHHHHhccCCCcccCCCccccCCCCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 99999876 4 5789999999999955 9999999999999999999999999886 34 68999999999
Q ss_pred HHhcchhHHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcC-CCcccCccccchhHH
Q psy14237 228 YKVVPPVLIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALG-LPIERPKSLSTNDLV 305 (360)
Q Consensus 228 e~~~~~~~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~-~~i~RP~~~y~g~~~ 305 (360)
|+++.+ +++|+.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ .+|+||++.|+|+..
T Consensus 352 E~~al~--~~~~~~k~l~pNVDfysg~i~~~lGiP-~~~ft~lFaisR~~GW~AH~~Eq~~~~~~kI~RPr~~Y~G~~~ 427 (436)
T 2h12_A 352 EKIALS--DDYFVQRKLYPNVDFYSGIILKAMGIP-TSMFTVLFAVARTTGWVSQWKEMIEEPGQRISRPRQLYIGAPQ 427 (436)
T ss_dssp HHHHHH--SHHHHHTTCCBCTHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCEEEECSCCC
T ss_pred HHHHHh--hhhccccCCCcChHHHHHHHHHHhCCC-hhhhhhhhhhhccccHHHHHHHHHhCCCCceecccccccCCCC
Confidence 998743 346677999999999999999999998 599999999999999999999999876 589999999999743
No 4
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=2e-83 Score=645.99 Aligned_cols=286 Identities=28% Similarity=0.418 Sum_probs=258.7
Q ss_pred CcCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCC
Q psy14237 1 MLNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTN 80 (360)
Q Consensus 1 ~i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~ 80 (360)
+|++||+++|||++|+++|++|+++++. ..+. ..+++.+++++|||||+|+|+|++||+ +.|+++++|+++
T Consensus 120 ~~~~~p~~~hPM~~l~~~vsaL~~~~~~------~~~~-~~~~~~~~~a~rLiAk~pti~a~~yr~--~~G~~~~~p~~~ 190 (426)
T 3l96_A 120 LFHAFRRDSHPMAVMCGITGALAAFYHD------SLDV-NNPRHREIAAFRLLSKMPTMAAMCYKY--SIGQPFVYPRND 190 (426)
T ss_dssp HHTTSCTTSCHHHHHHHHHTTGGGTCGG------GCCT-TSHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCCCCCCCTT
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHhhCcc------cccC-CCHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCCC
Confidence 3688999999999999999999986542 2221 236888899999999999999999995 579999999999
Q ss_pred CCHHHHHHHHhCCC-------CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccH
Q psy14237 81 KDWSANFTSMLGFD-------NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQ 153 (360)
Q Consensus 81 ls~a~nfl~ml~g~-------~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e 153 (360)
+||++|||+||++. ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||
T Consensus 191 ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysaiaAgi~aL~GplHGGAne 269 (426)
T 3l96_A 191 LSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHE-QNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANE 269 (426)
T ss_dssp SCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSCCS-SCHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTSSHHH
T ss_pred CCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhcccCC-CCchHHHHHHHhccCCcHHHHHHHHHHhccCCccCCHHH
Confidence 99999999999763 7899999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcchhHHHHHHHHHHhCCC--cccccCCCCCCCCCCcHHHHHHHHHhh---CC-CChHHHHHHHH
Q psy14237 154 EVLIWLKKLQQQVGDNVSEEKLKEFIWNTLKSGQ--VVPGYGHAVLRKTDPRYTCQREFAQKH---LP-DDSLFKLVSQV 227 (360)
Q Consensus 154 ~v~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~g~--~IpGFGHrvYk~~DPRa~~L~~~a~~~---~~-~~~~~~~a~~l 227 (360)
+|++||+++ + +++++++||++.+++|+ +||||||||||+.|||+++|+++|+++ .+ ++++++++.++
T Consensus 270 ~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~~~I~GfGHrVyk~~DPRa~~l~~~a~~l~~~~g~~~~~~~~a~~l 342 (426)
T 3l96_A 270 AALKMLEEI----G---KKENIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMEL 342 (426)
T ss_dssp HHHHHHHHC----C---SSSSTTTTSGGGCCSSCCTGGGTBCCSSCSSCCTTHHHHHHHHHHHHHHTCSCCSSTTHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 999999765 5 45789999999999999 999999999999999999999999865 23 68999999999
Q ss_pred HHhcchhHHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHHH
Q psy14237 228 YKVVPPVLIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLVK 306 (360)
Q Consensus 228 e~~~~~~~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~~ 306 (360)
|+++.+ +++++.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++++|+||++.|+|+..+
T Consensus 343 e~~~~~--~~~~~~k~l~pNVDfysg~i~~~lGip-~~~ft~lFaisR~~Gw~AH~~Eq~~~~~~I~RPr~~Y~G~~~r 418 (426)
T 3l96_A 343 ENIALN--DPYFIEKKLYPNVDFYSGIILKAMGIP-SSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKR 418 (426)
T ss_dssp HHHHHH--CHHHHHHTCCBCHHHHHHHHHHHTTCC-THHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCCC
T ss_pred HHHHhh--cccccccCCCCchHHHHHHHHHHcCCC-cccchhhhHHHHHHHHHHHHHHHHhcCCCccCCcceecCCCCC
Confidence 999865 456677999999999999999999998 5999999999999999999999998767999999999998543
No 5
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=6.3e-82 Score=625.91 Aligned_cols=274 Identities=27% Similarity=0.431 Sum_probs=249.7
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++ + |++.++++++|||++|+|+|++||+ +.|+++++|++++
T Consensus 81 ~~~~p~~~hpM~~l~~~v~~l~~~~~------~-------~~~~~~~a~~lia~~p~i~a~~y~~--~~g~~~i~p~~~l 145 (367)
T 2p2w_A 81 LYHLPKNLHYIDVLKIFLSIHGSMDG------N-------DEDLREKAIRVASVFPTILAYYYRY--SKGKELIRPRKDL 145 (367)
T ss_dssp HTTSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCccCCChHHHHHHHHHHHhccCC------C-------hHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCCC
Confidence 57899999999999999999998543 1 5778899999999999999999995 5688888999999
Q ss_pred CHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHHHH
Q psy14237 82 DWSANFTSMLGFDNHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWLKK 161 (360)
Q Consensus 82 s~a~nfl~ml~g~~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l~~ 161 (360)
||++|||+|++++.+.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||++
T Consensus 146 ~~a~nfl~ml~~~~~~~~~~ld~~LvL~ADHg-~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne~v~~ml~e 224 (367)
T 2p2w_A 146 SHVENFYYMMFGERNEKIRLLESAFILLMEQD-INASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPMLEE 224 (367)
T ss_dssp CHHHHHHHHHHSCCCTTHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCChHHHHHHHHHHhHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHHHHHHHHHH
Confidence 99999999998866888999999999999998 89999999999999999999999999999999999999999999987
Q ss_pred HHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhCCCChHHHHHHHHHHhcchhHHhhCCC
Q psy14237 162 LQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHLPDDSLFKLVSQVYKVVPPVLIETGKV 241 (360)
Q Consensus 162 i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~~~~~~~~~ 241 (360)
+ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.++++++++++++|+++.+ ++ .
T Consensus 225 i----~---~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~----~~-~ 292 (367)
T 2p2w_A 225 I----G---SEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIVS----NK-I 292 (367)
T ss_dssp H----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH----TT-G
T ss_pred h----c---CchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHHH----Hh-c
Confidence 6 4 568899999999999999999999999999999999999999985678999999999998643 44 6
Q ss_pred CCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHH
Q psy14237 242 KNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLV 305 (360)
Q Consensus 242 k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~ 305 (360)
|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+..
T Consensus 293 k~l~pNVDf~sg~v~~~lGip-~~~~t~lFai~R~~Gw~AH~~Eq~~~~-~iiRP~~~Y~G~~~ 354 (367)
T 2p2w_A 293 KNIYPNVDLYSSVLFEELGFP-RNMFTALFATARVVGWTAHVIEYVSDN-KLIRPTSEYVGPMD 354 (367)
T ss_dssp GGCCBCHHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCCCCCSCCS
T ss_pred cCCCCChHHHHHHHHHHhCCC-hhhhhhHHHHhccccHHHHHHHHHhcC-CccCccccccCCCC
Confidence 899999999999999999998 599999999999999999999999875 89999999999743
No 6
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-81 Score=630.02 Aligned_cols=276 Identities=22% Similarity=0.309 Sum_probs=255.1
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|+++++.. .+ |++.+++++|||||+|+|+|++||+ +.|+++++|++++
T Consensus 128 i~~~p~~~hPM~~l~~~vsaL~~~~~~~---------~~-~~~~~~~a~rLiAk~pti~a~~yr~--~~g~~~~~p~~~l 195 (414)
T 3hwk_A 128 LAKLPDNCHPMDVVRTAISYLGAEDPDE---------DD-AAANRAKAMRMMAVLPTIVAIDMRR--RRGLPPIAPHSGL 195 (414)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHTCTTT---------TC-GGGHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCCCCCHHHHHHHHHHHHhhcCCcc---------cC-HHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCCCCCCccc
Confidence 5679999999999999999999876521 11 7899999999999999999999995 6899999999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++|||+||+++ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 196 s~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~NaST~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml 274 (414)
T 3hwk_A 196 GYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHG-FNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDM 274 (414)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHH
T ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhcCCCHHHHHHHHHHHhcCCccCChHHHHHHHH
Confidence 9999999999875 8899999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhh---CCCChHHHHHHHHHHhcchhHH
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKH---LPDDSLFKLVSQVYKVVPPVLI 236 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~---~~~~~~~~~a~~le~~~~~~~~ 236 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++ .+++++++++.++|+++.+
T Consensus 275 ~ei----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~L~~~a~~l~~~~g~~~~~~~a~~le~~~~~--- 344 (414)
T 3hwk_A 275 IEI----G---DPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEMAS--- 344 (414)
T ss_dssp HHH----C---SGGGHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---
T ss_pred HHh----C---CchHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 876 4 46889999999999999999999999999999999999999864 4678999999999998854
Q ss_pred hhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHHH
Q psy14237 237 ETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLVK 306 (360)
Q Consensus 237 ~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~~ 306 (360)
.|+++||||||+|++|++|||| .++||+||++||++||+||++||+..+ +|+||++.|+|+..+
T Consensus 345 ----~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFaisR~~Gw~AH~~Eq~~~~-riiRPr~~Y~G~~~r 408 (414)
T 3hwk_A 345 ----ATGILPNLDFPTGPAYYLMGFD-IASFTPIFVMSRITGWTAHIMEQATAN-ALIRPLSAYCGHEQR 408 (414)
T ss_dssp ----HHCCCBCTHHHHHHHHHHHTCC-GGGHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCCCC
T ss_pred ----hcCCCCchHHHHHHHHHHhCCC-HHHHHHHHHHHhHHHHHHHHHHHHhcC-CCcCCCceeeCCCCC
Confidence 3799999999999999999998 599999999999999999999999875 999999999997644
No 7
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=3e-81 Score=620.12 Aligned_cols=278 Identities=23% Similarity=0.313 Sum_probs=257.0
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|++ +. . +|++.++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 80 ~~~~p~~~hpM~~l~~~v~~l~~-~~-------~-----~~~~~~~~a~~Lia~~p~i~a~~~~~--~~g~~~i~p~~~l 144 (363)
T 2c6x_A 80 IQSLPNNMDDMSVLRTVVSALGE-NT-------Y-----TFHPKTEEAIRLIAITPSIIAYRKRW--TRGEQAIAPSSQY 144 (363)
T ss_dssp HHHSCSSSCHHHHHHHHHHHHCC-SS-------C-----CSSCCHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCcccCCchHHHHHHHHhhcC-CC-------C-----ChHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCcCCCCCC
Confidence 46799999999999999999987 21 0 15667789999999999999999995 5688888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 145 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l 223 (363)
T 2c6x_A 145 GHVENYYYMLTGEQPSEAKKKALETYMILATEHG-MNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAVTKML 223 (363)
T ss_dssp CSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchHHHHHHH
Confidence 9999999999874 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhCCCChHHHHHHHHHHhcchhHHhhC
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHLPDDSLFKLVSQVYKVVPPVLIETG 239 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~~~~~~~ 239 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.++++++++++++|+++.+...+||
T Consensus 224 ~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~~~g~yf 296 (363)
T 2c6x_A 224 EDI----G---EKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIRLLEIYK 296 (363)
T ss_dssp HTC----C---SSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHh----C---ChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcccc
Confidence 754 4 467899999999999999999999999999999999999999987789999999999999876433788
Q ss_pred CCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 240 KVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 240 ~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
+.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+.
T Consensus 297 ~~k~l~pNVD~~sg~i~~~lG~p-~~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 359 (363)
T 2c6x_A 297 PGRKLYTNVEFYAAAVMRAIDFD-DELFTPTFSASRMVGWCAHVLEQAENN-MIFRPSAQYTGAI 359 (363)
T ss_dssp CSSCCCBCTHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHTTTC-CCCCCEEEECSCC
T ss_pred ccCCCCcChHHHHHHHHHHhCCC-hhhhhhhhHHhccccHHHHHHHHHHcC-CccCCccccCCCC
Confidence 99999999999999999999998 599999999999999999999999986 9999999999975
No 8
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=1.8e-81 Score=623.56 Aligned_cols=275 Identities=23% Similarity=0.309 Sum_probs=252.8
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCC-
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTN- 80 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~- 80 (360)
|++||+++|||++|+++|++|++++++. .|+..+++++|||||+|+|+|++||+ +.|++++.|+++
T Consensus 86 ~~~~p~~~hpM~~l~~~v~aL~~~~~~~-----------~~~~~~~~a~~LiAk~p~i~a~~yr~--~~g~~~i~p~~~~ 152 (375)
T 3tqg_A 86 LERIPASSHPMDVMRTGCSMLGNLEPEN-----------GFENEQNIADRLVAIFPAIQCYWYHY--SHHGKRIDTELDD 152 (375)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHSCCC-----------SGGGHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCCCCC
T ss_pred HHhCCCCCChHHHHHHHHHHHHhcCCCC-----------ChHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCcCCCCcc
Confidence 6789999999999999999999865421 26888999999999999999999995 477788888876
Q ss_pred CCHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHH
Q psy14237 81 KDWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIW 158 (360)
Q Consensus 81 ls~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~ 158 (360)
+||++||++||+|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++|
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe-~n~St~tarvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~m 231 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHE-FNASTFAARVCSATLSDIYSAVTAAIATLRGPLHGGANEAAMDL 231 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHH
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCHHHHHHHHHHccCCCHHHHHHHHHHhccCcccCCHHHHHHHH
Confidence 99999999999885 8999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---CCChHHHHHHHHHHhcchhH
Q psy14237 159 LKKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PDDSLFKLVSQVYKVVPPVL 235 (360)
Q Consensus 159 l~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~~~~~~~a~~le~~~~~~~ 235 (360)
|+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.++|+++.+
T Consensus 232 l~~i----~---~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le~~~~~-- 302 (375)
T 3tqg_A 232 IMLY----K---TPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLFDISDAIENTMQD-- 302 (375)
T ss_dssp HTTC----S---SHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHHHHHHH--
T ss_pred HHHh----c---ChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence 9754 4 578999999999999999999999999999999999999999873 468999999999998753
Q ss_pred HhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHHH
Q psy14237 236 IETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLVK 306 (360)
Q Consensus 236 ~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~~ 306 (360)
.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+..+
T Consensus 303 -----~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFa~sR~~Gw~AH~~Eq~~~~-~iiRP~~~Y~G~~~r 366 (375)
T 3tqg_A 303 -----EKKLFPNLDFYSATAYHFLNIP-TKLFTPIFVMSRVTGWCAHIFEQRKDN-RIIRPNADYIGPEEQ 366 (375)
T ss_dssp -----HHCCCBCHHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCCCB
T ss_pred -----hcCCCCChHHHHHHHHHHcCCC-HHHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCCcceecCCCCC
Confidence 3799999999999999999998 599999999999999999999999886 899999999998543
No 9
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=8e-80 Score=612.76 Aligned_cols=281 Identities=26% Similarity=0.367 Sum_probs=256.8
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++.. . +.+|+..++++++|||++|+|+|++||+ +.|+++++|++++
T Consensus 82 ~~~~p~~~hpM~~l~~~v~~l~~~~~~~------~--~~~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 151 (377)
T 1iom_A 82 FKRYPVSAHPMSFLRTAVSEFGMLDPTE------G--DISREALYEKGLDLIAKFATIVAANKRL--KEGKEPIPPREDL 151 (377)
T ss_dssp HTTSCTTSCHHHHHHHHHHHHHHTCTTT------T--CCSHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCcCCCchhHHHHHHHHHhccCCCc------c--cCCHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCCC
Confidence 5789999999999999999999865421 1 1258899999999999999999999995 5688888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml 230 (377)
T 1iom_A 152 SHAANFLYMANGVEPSPEQARLMDAALILHAEHG-FNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMI 230 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHHHHHHH
Confidence 9999999999875 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhh---CCCChHHHHHHHHHHhcchhHH
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKH---LPDDSLFKLVSQVYKVVPPVLI 236 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~---~~~~~~~~~a~~le~~~~~~~~ 236 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++ .+.++++++++++|+++.+
T Consensus 231 ~ei----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~~~--- 300 (377)
T 1iom_A 231 QEI----G---TPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGK--- 300 (377)
T ss_dssp HHH----C---SHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH---
T ss_pred HHh----c---CchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH---
Confidence 876 4 57899999999999999999999999999999999999999887 3578999999999998854
Q ss_pred hhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHH
Q psy14237 237 ETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLV 305 (360)
Q Consensus 237 ~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~ 305 (360)
+++ .|+++||||||+|++|++|||| .++||+||++||++||+||++||+..+++|+||++.|+|+..
T Consensus 301 ~~~-~k~l~pNVD~~sg~i~~~lG~p-~~~~t~lF~i~R~~Gw~AH~~Eq~~~~~~i~RP~~~Y~G~~~ 367 (377)
T 1iom_A 301 VLN-PRGIYPNVDFYSGVVYSDLGFS-LEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELD 367 (377)
T ss_dssp HHT-TTTCCBCHHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSS
T ss_pred Hhc-cCCCCCChHHHHHHHHHHcCCC-HHhhhhHHHHhccccHHHHHHHHHhhcCCcccccccccCCCC
Confidence 245 6899999999999999999998 599999999999999999999999934599999999999743
No 10
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=5.4e-81 Score=624.65 Aligned_cols=279 Identities=23% Similarity=0.334 Sum_probs=250.7
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|+++++... +..++..+++++|||||+|+|+|++||++ ..|+++.++++++
T Consensus 112 ~~~~p~~~hPM~~L~~~vsaL~~~~~~~~--------d~~~~~~~~~a~rLiAk~pti~a~~yr~~-~g~~~i~~~~~~l 182 (404)
T 3o8j_A 112 LEALPAASHPMDVMRTGVSALGCTLPEKE--------GHTVSGARDIADKLLASLSSILLYWYHYS-HNGERIQPETDDD 182 (404)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHSCCCT--------TCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCS
T ss_pred HHhCCCCCChHHHHHHHHHHHHhcCcccc--------cCCcHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCCCCC
Confidence 67899999999999999999998665321 12357788999999999999999999963 3444444456899
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++|||+||+|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 183 s~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~N~St~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml 261 (404)
T 3o8j_A 183 SIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANEVSLEIQ 261 (404)
T ss_dssp SHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SSHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTCHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhcCCCHHHHHHHHHHHccCCCcCCHHHHHHHHH
Confidence 9999999999885 8899999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---CCChHHHHHHHHHHhcchhHH
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PDDSLFKLVSQVYKVVPPVLI 236 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~~~~~~~a~~le~~~~~~~~ 236 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +.+++++++.++|+++.+
T Consensus 262 ~~i----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~~~g~~~~~~~a~~le~~~~~--- 331 (404)
T 3o8j_A 262 QRY----E---TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWE--- 331 (404)
T ss_dssp TTC----S---SHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH---
T ss_pred HHh----c---CchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH---
Confidence 754 4 578999999999999999999999999999999999999998863 468999999999998732
Q ss_pred hhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHHH
Q psy14237 237 ETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLVK 306 (360)
Q Consensus 237 ~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~~ 306 (360)
.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+..+
T Consensus 332 ----~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFaisR~~Gw~AH~~Eq~~~~-riiRPr~~Y~G~~~r 395 (404)
T 3o8j_A 332 ----TKKMFPNLDWFSAVSYNMMGVP-TEMFTPLFVIARVTGWAAHIIEQRQDN-KIIRPSANYTGPEDR 395 (404)
T ss_dssp ----HHCCCBCTTTHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCEEECSCCSC
T ss_pred ----hcCCCcChHHHHHHHHHHcCCC-hHhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCcceecCCCCC
Confidence 4899999999999999999998 599999999999999999999999876 899999999998543
No 11
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=8.7e-81 Score=619.66 Aligned_cols=278 Identities=24% Similarity=0.364 Sum_probs=255.2
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++ +. + +|+..++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 83 ~~~~p~~~hpM~~l~~~v~~l~~~~~------~~-~---~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 150 (377)
T 1o7x_A 83 IYLMPKEADAIGLLEVGTAALASIDK------NF-K---WKENDKEKAISIIAKMATLVANVYRR--KEGNKPRIPEPSD 150 (377)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCC------CC-C---SSSSHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCCCS
T ss_pred HHhCcccCCcHHHHHHHHHHHhhcCC------Cc-C---CHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCCCC
Confidence 46799999999999999999998543 22 1 26788999999999999999999995 5788888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 151 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml 229 (377)
T 1o7x_A 151 SFAKSFLLASFAREPTTDEINAMDKALILYTDHE-VPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQF 229 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHHHHHHH
Confidence 9999999999874 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHH-hCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---CC-ChHHHHHHHHHHhcchh
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTL-KSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PD-DSLFKLVSQVYKVVPPV 234 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l-~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~-~~~~~~a~~le~~~~~~ 234 (360)
+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. ++ ++++++++++|+++.+
T Consensus 230 ~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~~~~~- 301 (377)
T 1o7x_A 230 IEI----G---DPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIK- 301 (377)
T ss_dssp HHH----C---SGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHh----C---ChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-
Confidence 876 4 5688999999999 99999999999999999999999999999873 45 7899999999999865
Q ss_pred HHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 235 LIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 235 ~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
+++.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.+.++|+||++.|+|+.
T Consensus 302 ---~~~~k~l~pNVD~~sg~v~~~lG~p-~~~~t~lF~i~R~~Gw~AH~~Eq~~~~~~i~RP~~~Y~G~~ 367 (377)
T 1o7x_A 302 ---QFSSKGIYPNTDFYSGIVFYALGFP-VYMFTALFALSRTLGWLAHIIEYVEEQHRLIRPRALYVGPE 367 (377)
T ss_dssp ---HHTTTTCCBCTTTTHHHHHHHHTCC-GGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCS
T ss_pred ---HHhhcCCCCChHHHHHHHHHHhCCC-hhhhhhHHHHhhhccHHHHHHHHHhccCCccCCcccccCCC
Confidence 3456899999999999999999998 59999999999999999999999998349999999999974
No 12
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3e-80 Score=621.07 Aligned_cols=286 Identities=31% Similarity=0.450 Sum_probs=261.9
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhh----hhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFA----KAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAI 77 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~----~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p 77 (360)
|+.||++ |||++|+++|++|+++++++ .+|..+..|.++|+..++++++|||++|+|+|++||+ +.|+++++|
T Consensus 101 ~~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~~g~~k~~~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p 177 (409)
T 2ibp_A 101 IRNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRIAEKLVAKMPTIVAYHYRF--SRGLEVVRP 177 (409)
T ss_dssp HHHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCC
T ss_pred HHhCCcc-CchHHHHHHHHHHhccCccccchhhhhhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCcccC
Confidence 5679999 99999999999999988765 2456666666678999999999999999999999996 568888899
Q ss_pred CCCCCHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHH
Q psy14237 78 DTNKDWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEV 155 (360)
Q Consensus 78 ~~~ls~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v 155 (360)
++++||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|
T Consensus 178 ~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg-~naST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v 256 (409)
T 2ibp_A 178 RDDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHE-VPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMA 256 (409)
T ss_dssp CTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCC-CChhHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHH
Confidence 99999999999999875 8999999999999999998 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcchhHHHHHHHHHHhC-CCcccccCCCCCCCCCCcHHHHHHHHHhhC---CCC-hHHHHHHHHHHh
Q psy14237 156 LIWLKKLQQQVGDNVSEEKLKEFIWNTLKS-GQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PDD-SLFKLVSQVYKV 230 (360)
Q Consensus 156 ~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~-g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~~-~~~~~a~~le~~ 230 (360)
++||+++ + +++++++||++.+++ |++||||||||||+.|||+++|+++++++. +.+ +++++++++|++
T Consensus 257 ~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~g~~~~~a~~le~~ 329 (409)
T 2ibp_A 257 VRNYLEI----G---TPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDYVAKFGDPQNLFAIASAIEQE 329 (409)
T ss_dssp HHHHHHH----C---CGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCCTTCHHHHHHHHHHH
T ss_pred HHHHHHh----C---CHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 9999876 4 468999999999999 999999999999999999999999998872 444 999999999999
Q ss_pred c--chhHHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 231 V--PPVLIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 231 ~--~~~~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
+ .+++ +.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+.
T Consensus 330 ~l~~~~~----~~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFaisR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 399 (409)
T 2ibp_A 330 VLSHPYF----QQRKLYPNVDFWSGIAFYYMGIP-YEYFTPIFAMSRVVGWVAHVLEYWENN-RIFRPRACYIGPH 399 (409)
T ss_dssp HHHCHHH----HHTTCCBCGGGTHHHHHHHHTCC-GGGHHHHHHHHHHHHHHHHHHHHGGGC-CCCCCEEEECSCC
T ss_pred Hccchhh----hhcCCCCChHHHHHHHHHHhCCC-HHhhhhHHHHhccccHHHHHHHHHhcC-CccCchhhccCCC
Confidence 8 5544 34899999999999999999998 599999999999999999999999986 8999999999974
No 13
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=4e-80 Score=615.10 Aligned_cols=279 Identities=24% Similarity=0.334 Sum_probs=255.3
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|+++++ +.. + |++.++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 84 ~~~~p~~~hpM~~l~~~v~~l~~~~~------~~~---~-~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 151 (378)
T 1vgm_A 84 IFSMPRNCDAIGMMETAFGILASIYD------PKW---N-RATNKELAVQIIAKTATITANIYRA--KEGLKPKIPEPSE 151 (378)
T ss_dssp HTTSCTTSCHHHHHHHHHHHHHHHHC------CCC---C-TTTHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCCCS
T ss_pred HHhCCCCCCcHHHHHHHHHHHhccCC------ccC---C-HHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCCCCCCCCC
Confidence 57899999999999999999997532 221 1 6788999999999999999999995 5788888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml 230 (378)
T 1vgm_A 152 SYAESFLAATFGKKPTQEEIKAMDASLILYTDHE-VPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAFKQF 230 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHHHHHHH
Confidence 9999999999874 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHH-hCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---C-CChHHHHHHHHHHhcchh
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTL-KSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---P-DDSLFKLVSQVYKVVPPV 234 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l-~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~-~~~~~~~a~~le~~~~~~ 234 (360)
+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. + +++++++++++|+++.+
T Consensus 231 ~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~- 302 (378)
T 1vgm_A 231 VEI----G---SVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEKLGVD- 302 (378)
T ss_dssp HHH----C---SGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHh----C---CHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-
Confidence 876 4 5688999999999 99999999999999999999999999999873 4 56899999999999865
Q ss_pred HHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHH
Q psy14237 235 LIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLV 305 (360)
Q Consensus 235 ~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~ 305 (360)
+++.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++++|+||++.|+|+..
T Consensus 303 ---~~~~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~Y~G~~~ 369 (378)
T 1vgm_A 303 ---TFGSKHIYPNTDFYSGIVFYALGFP-IYMFTSLFALSRVLGWLAHIIEYVEEQHRLIRPRALYIGPEK 369 (378)
T ss_dssp ---HHGGGTCCBCTTTTHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCCC
T ss_pred ---HHhhCCCCCChHHHHHHHHHHhCCC-HHhhhHHHHHHhhccHHHHHHHHHhccCCccCcccccCCCCC
Confidence 3456899999999999999999998 599999999999999999999999983499999999999743
No 14
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=7.9e-80 Score=611.68 Aligned_cols=279 Identities=29% Similarity=0.419 Sum_probs=255.9
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++.. +...+|+..++++++|||++|+|+|++||+ +.|+++++|++++
T Consensus 80 ~~~~p~~~hpM~~l~~~v~~l~~~~~~~-------~~~~~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 150 (371)
T 1aj8_A 80 MEALPKNTHPMGALRTIISYLGNIDDSG-------DIPVTPEEVYRIGISVTAKIPTIVANWYRI--KNGLEYVPPKEKL 150 (371)
T ss_dssp HHHSCTTCCHHHHHHHHHHHHHHHSTTT-------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCCCCChHHHHHHHHHHHhccCCcc-------cccCCHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCCC
Confidence 5679999999999999999999865421 111158999999999999999999999995 5688888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 151 s~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l 229 (371)
T 1aj8_A 151 SHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQF 229 (371)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCC-CChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchHHHHHHH
Confidence 9999999999875 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhCCCChHHHHHHHHHHhcchhHHhhC
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHLPDDSLFKLVSQVYKVVPPVLIETG 239 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~~~~~~~ 239 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++ ++++++++++++|+++. +++
T Consensus 230 ~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~-~~~~~~~~a~~le~~~~----~~~ 297 (371)
T 1aj8_A 230 MEI----G---SPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL-GDKKLFEIAERLERLVE----EYL 297 (371)
T ss_dssp HHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH----HHT
T ss_pred HHh----c---CchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc-CCCHHHHHHHHHHHHHH----Hhc
Confidence 876 4 46889999999999999999999999999999999999999998 67899999999999864 356
Q ss_pred CCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 240 KVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 240 ~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
+.|+++||||||+|++|++|||| .++||+||++||++||+||++||+.++ +|+||++.|+|+.
T Consensus 298 ~~k~l~pNVD~~sg~i~~~lGip-~~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 360 (371)
T 1aj8_A 298 SKKGISINVDYWSGLVFYGMKIP-IELYTTIFAMGRIAGWTAHLAEYVSHN-RIIRPRLQYVGEI 360 (371)
T ss_dssp TTTTCCBCTTTTHHHHHHTTTCC-GGGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCEEEECSCC
T ss_pred cCCCCCCChHHHHHHHHHHcCCC-HHhhhhHHHHhccccHHHHHHHHHhcC-CccCchhhccCCC
Confidence 77999999999999999999998 599999999999999999999999876 8999999999974
No 15
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=1.1e-79 Score=612.39 Aligned_cols=282 Identities=23% Similarity=0.311 Sum_probs=254.8
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|++||+++|||++|+++|++|+++++.. . +.+|+..++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 84 ~~~~p~~~hpM~~l~~~v~~l~~~~~~~------~--~~~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 153 (378)
T 1a59_A 84 IDLLSTACHPMDVARTAVSVLGANHARA------Q--DSSPEANLEKAMSLLATFPSVVAYDQRR--RRGEELIEPREDL 153 (378)
T ss_dssp HTTSCTTSCHHHHHHHHHHHHHHTCTTT------T--CCSHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCCCCCcHHHHHHHHHHHHhcCCCc------c--CCCHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCCCCC
Confidence 5789999999999999999999865421 1 1258999999999999999999999996 5688888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|. ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 154 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l 232 (378)
T 1a59_A 154 DYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHS-FNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTF 232 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHHH
Confidence 9999999999875 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcc---hhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---CCChHHHHHHHHHHhcch
Q psy14237 160 KKLQQQVGDNVS---EEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PDDSLFKLVSQVYKVVPP 233 (360)
Q Consensus 160 ~~i~~~ig~~~~---~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~~~~~~~a~~le~~~~~ 233 (360)
+++.+. +++.. .+++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++++||+++.+
T Consensus 233 ~~i~~~-~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~ 311 (378)
T 1a59_A 233 EEIGIR-KDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEE 311 (378)
T ss_dssp HHSCCC-SSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHH
T ss_pred HHHhhc-CCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 877422 21111 27899999999999999999999999999999999999998873 678999999999998743
Q ss_pred hHHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 234 VLIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 234 ~~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
.|+++||||||+|++|++|||| .++||+||++||++||+||++||++++ +|+||++.|+|+.
T Consensus 312 -------~k~l~pNVD~~sg~i~~~lGip-~~~~t~lF~isR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 373 (378)
T 1a59_A 312 -------AKQIKPNLDYPAGPTYNLMGFD-TEMFTPLFIAARITGWTAHIMEQVADN-ALIRPLSEYNGPE 373 (378)
T ss_dssp -------HHCCCBCTHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCCCSCC
T ss_pred -------HhCCCCChHHHHHHHHHHhCCC-hhhcchhhhhhcchhHHHHHHHHHhcC-CCcCchhhccCCC
Confidence 2799999999999999999998 599999999999999999999999886 8999999999974
No 16
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=4.8e-80 Score=615.79 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=256.4
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++ +. + .+|+..++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 87 ~~~~p~~~hpM~~l~~~v~~l~~~~~------~~-~--~~~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 155 (385)
T 2ifc_A 87 IRQLPRESDAVAMQMAAVAAMAASET------KF-K--WNKDTDRDVAAEMIGRMSAITVNVYRH--IMNMPAELPKPSD 155 (385)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHCT------TC-C--CCTTTHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCCCS
T ss_pred HHhCCCCCCchHHHHHHHHHHHhcCC------cc-c--CCHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCCCC
Confidence 56899999999999999999998543 22 1 257889999999999999999999995 5688888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 156 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml 234 (385)
T 2ifc_A 156 SYAESFLNAAFGRKATKEEIDAMNTALILYTDHE-VPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAIAQF 234 (385)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCChHHHHHHHH
Confidence 9999999999874 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHH-hCCCcccccCCCCCCCCCCcHHHHHHHHHhhC----CCChHHHHHHHHHHhcchh
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTL-KSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL----PDDSLFKLVSQVYKVVPPV 234 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l-~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~----~~~~~~~~a~~le~~~~~~ 234 (360)
+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. +++++++++++||+++.++
T Consensus 235 ~ei----~---~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~ 307 (385)
T 2ifc_A 235 DEI----K---DPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIKA 307 (385)
T ss_dssp HHH----C---SGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHh----C---CHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHH
Confidence 876 4 4688999999999 99999999999999999999999999999873 4688999999999998653
Q ss_pred HHhhCCCCCCCCchhhHHHHHHHHhCCCCc--cchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhHH
Q psy14237 235 LIETGKVKNPWPNVDAHSGVLLQYYGLKEM--NYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDLV 305 (360)
Q Consensus 235 ~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~--~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~~ 305 (360)
++.|+++||||||+|++|++|||| . ++||+||++||++||+||++||+.+.++|+||++.|+|+..
T Consensus 308 ----~~~k~l~pNVD~~sg~v~~~lGip-~~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~Y~G~~~ 375 (385)
T 2ifc_A 308 ----FGSKGIYPNTDYFSGIVYMSIGFP-LRNNIYTALFALSRVTGWQAHFIEYVEEQQRLIRPRAVYVGPAE 375 (385)
T ss_dssp ----HGGGTCCBCTTTTHHHHHHHHTCC-SGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCC
T ss_pred ----HhhcCCCCChHHHHHHHHHHcCCC-cchhhhhhHHHHhhcccHHHHHHHHHhccCCccCcccccCCCcC
Confidence 456899999999999999999997 7 89999999999999999999999982399999999999743
No 17
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.5e-80 Score=613.94 Aligned_cols=275 Identities=30% Similarity=0.444 Sum_probs=252.1
Q ss_pred cCCCCCCCChHHHHHHHHHHhCCCchhhhhhcCCCCcCCChhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy14237 2 LNNFPNHLHPMSQFSAAITALNSESKFAKAYNDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTFQGGKGIGAIDTNK 81 (360)
Q Consensus 2 i~~lP~~~hPM~~L~t~vsal~~~~~~~~~~~~~~~~~~~~~~~~~~a~rLiAk~p~i~A~~yr~~~~~G~~~~~p~~~l 81 (360)
|+.||+++|||++|+++|++|+++++ . + |++.++++++||||+|+|+|++||+ +.|+++++|++++
T Consensus 82 ~~~~p~~~hpM~~l~~~v~~l~~~~~-~----------~-~~~~~~~a~~Lia~~p~i~a~~y~~--~~g~~~i~p~~~l 147 (373)
T 1vgp_A 82 LREVRKDAQPMDILRTAVSLLGIEDS-K----------N-DERTDIKGIKLISKFPTIVANYARL--RKGLDIIEPDPKL 147 (373)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCC-C----------C-SSCHHHHHHHHHHHHHHHHHHHHHH--HTTCCCCCCCTTS
T ss_pred HHhCCCCCChHHHHHHHHHHHhccCC-C----------C-hHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCCCC
Confidence 46799999999999999999998543 1 1 5677889999999999999999995 5788888999999
Q ss_pred CHHHHHHHHhCCC--CHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhcCCcChHHHHHHhhhcccCCCCccccHHHHHHH
Q psy14237 82 DWSANFTSMLGFD--NHQFTELMRLYLTIHSDHEGGNVSAHTVHLVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLIWL 159 (360)
Q Consensus 82 s~a~nfl~ml~g~--~~~~~~~ld~~LIL~ADHe~~n~STfaaRvvaSt~ad~ysavaAgi~aL~GplHGGA~e~v~~~l 159 (360)
||++||++|++|+ ++.++++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+||||||+|++||
T Consensus 148 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml 226 (373)
T 1vgp_A 148 SHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHE-MNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGANYEALKMF 226 (373)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCCHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHHHHHHHH
Confidence 9999999999875 8999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcchhHHHHHHHHHHhCCCcccccCCCCCCCCCCcHHHHHHHHHhhC---CCC--hHHHHHHHHHHhcchh
Q psy14237 160 KKLQQQVGDNVSEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDPRYTCQREFAQKHL---PDD--SLFKLVSQVYKVVPPV 234 (360)
Q Consensus 160 ~~i~~~ig~~~~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DPRa~~L~~~a~~~~---~~~--~~~~~a~~le~~~~~~ 234 (360)
+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +.+ ++++++++||+++.+
T Consensus 227 ~~i----~---~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le~~~~~- 298 (373)
T 1vgp_A 227 KEI----G---SPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVEEIGIK- 298 (373)
T ss_dssp HHS----C---SSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHH-
T ss_pred HHh----c---CchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-
Confidence 765 4 457899999999999999999999999999999999999998873 455 899999999998743
Q ss_pred HHhhCCCCCCCCchhhHHHHHHHHhCCCCccchhhHHhhhhhHHHHHhHHHHHHcCCCcccCccccchhH
Q psy14237 235 LIETGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLIWDRALGLPIERPKSLSTNDL 304 (360)
Q Consensus 235 ~~~~~~~k~l~pNVD~ysa~l~~~LGiP~~~~~t~lFaisR~~Gw~AH~~Eq~~~~~~i~RP~~~y~g~~ 304 (360)
+++.|+++||||||+|++|++|||| .++||+||++||++||+||++||++++ +|+||++.|+|+.
T Consensus 299 ---~~~~k~l~pNVDf~sg~i~~~lGip-~~~~t~lFaisR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 363 (373)
T 1vgp_A 299 ---YLGPKGIYPNVDFFSSIVFYSLGFE-PDFFPAVFASARVVGWVAHIMEYIKDN-KIIRPKAYYKGEI 363 (373)
T ss_dssp ---HHGGGTCCBCHHHHHHHHHHHTTCC-GGGHHHHHHHHHHHHHHHHHHHHGGGC-CCCCCCCCCCSCC
T ss_pred ---hcccCCCCCChHHHHHHHHHHcCCC-HHhhhhhHHhhccccHHHHHHHHHhcC-CCcCccccccCCC
Confidence 4556899999999999999999998 599999999999999999999999876 8999999999974
No 18
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=28.13 E-value=62 Score=30.51 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=32.4
Q ss_pred chhHHHHHHHHHHhCCCcccccCCCCCCCCCC-cHHHHHHHHHh
Q psy14237 171 SEEKLKEFIWNTLKSGQVVPGYGHAVLRKTDP-RYTCQREFAQK 213 (360)
Q Consensus 171 ~~~~~~~~v~~~l~~g~~IpGFGHrvYk~~DP-Ra~~L~~~a~~ 213 (360)
+++++++.+++.++.++.|.+-||-+.+..+| ..+.+.+.+++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~e 345 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDE 345 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHH
Confidence 46778888888888888898899998887776 45555555544
Done!