BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14241
(136 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157129398|ref|XP_001661672.1| hypothetical protein AaeL_AAEL011462 [Aedes aegypti]
gi|108872235|gb|EAT36460.1| AAEL011462-PA [Aedes aegypti]
Length = 295
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 96/113 (84%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL+NNPKI+V +Y+FK VFKIKD K L++LLKQHDLKG+GG+LLDDV+ESLP
Sbjct: 109 WLQTEALRNNPKIDVTPEGRYVFKAVFKIKDGKSLMRLLKQHDLKGLGGVLLDDVQESLP 168
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
HCEK LKN EI+++TRP DK+KV+FYND+SA +DEDFQKLWR+++VD M
Sbjct: 169 HCEKVLKNRASEIVFITRPNDKKKVLFYNDRSANFQIDEDFQKLWRAVTVDAM 221
>gi|357605075|gb|EHJ64456.1| transcription initiation factor IIE subunit beta [Danaus plexippus]
Length = 291
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEALQNNPKIE K+IFKPV+KIKD+K LL+LLKQHDLKG+GGI L+DV+ESL
Sbjct: 109 QWLQTEALQNNPKIEHTFDGKFIFKPVYKIKDKKSLLRLLKQHDLKGLGGIFLEDVQESL 168
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC++ALK+ EI+Y+TRP+DK+K++FYNDK+A LD+DE+F KLWR+ +VD M
Sbjct: 169 PHCDRALKSLAQEILYITRPSDKKKILFYNDKTATLDVDEEFVKLWRATAVDAM 222
>gi|118786363|ref|XP_315392.3| AGAP005382-PA [Anopheles gambiae str. PEST]
gi|116126285|gb|EAA11794.3| AGAP005382-PA [Anopheles gambiae str. PEST]
Length = 295
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 95/113 (84%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL EAL+NNPKIEV +++FK VFKIKD K L++LLKQHDLKG+GG+LLDDV+ESLP
Sbjct: 109 WLQGEALRNNPKIEVTPDGRFLFKSVFKIKDGKSLMRLLKQHDLKGLGGVLLDDVQESLP 168
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
HC+K LKN EII++TRP DK+K++FYND++A +DEDFQKLWR+++VD M
Sbjct: 169 HCDKVLKNRASEIIFITRPNDKKKILFYNDRTANFQVDEDFQKLWRAVTVDAM 221
>gi|307184669|gb|EFN70998.1| General transcription factor IIE subunit 2 [Camponotus floridanus]
Length = 286
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++ FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESL
Sbjct: 116 QWLQTEALLKNPKIEVTSDSRFAFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+Y+TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD M
Sbjct: 176 PHCDKHLKSLQNEILYITRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAM 229
>gi|332021782|gb|EGI62128.1| General transcription factor IIE subunit 2 [Acromyrmex echinatior]
Length = 280
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 100/114 (87%), Gaps = 4/114 (3%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +G +++FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESL
Sbjct: 110 QWLQTEALIQNPKIEVTDG-RFVFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESL 168
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+Y+TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD M
Sbjct: 169 PHCDKHLKNLQNEILYITRPLDKKKIIFYNDKTAQFPIDEEFQKLWRAVAVDAM 222
>gi|312371209|gb|EFR19450.1| hypothetical protein AND_22400 [Anopheles darlingi]
Length = 238
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 95/113 (84%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL EAL+NNPKIE+ +Y+FK VFK+KD K L++LLKQHDLKG+GG+LLDDV+ESLP
Sbjct: 52 WLQGEALRNNPKIELTPDGRYLFKAVFKLKDGKSLMRLLKQHDLKGLGGVLLDDVQESLP 111
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
HCEK LKN EI+++TRP DK+K+++YND++A +DEDFQKLWRS++VD M
Sbjct: 112 HCEKVLKNRASEIVFITRPNDKKKILYYNDRTANFQVDEDFQKLWRSVTVDAM 164
>gi|322797068|gb|EFZ19357.1| hypothetical protein SINV_01812 [Solenopsis invicta]
Length = 280
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 99/114 (86%), Gaps = 4/114 (3%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NPKIEV EG +++FKP++KIKD+K LL+LLKQHDLKG+GGILL+D++ESL
Sbjct: 110 QWLQSEALVQNPKIEVTEG-RFVFKPMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESL 168
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+Y+ RP DK+K++FYNDK+AQ +DE+FQKLWR+++VD M
Sbjct: 169 PHCDKHLKSLQNEILYIIRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAM 222
>gi|307208277|gb|EFN85709.1| General transcription factor IIE subunit 2 [Harpegnathos saltator]
Length = 281
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKI+V ++++FK ++KIKD+K LL+LLKQHDLKG+GGILL+D++ESL
Sbjct: 110 QWLQTEALVKNPKIDVTTDSRFVFKAMYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESL 169
Query: 62 PHCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCE KAL+NEI+++TRP DK+K++FYNDK+AQ +DE+FQKLWR+++VD M
Sbjct: 170 PHCEKHLKALQNEILFITRPLDKKKIVFYNDKTAQFPIDEEFQKLWRAVAVDAM 223
>gi|195135453|ref|XP_002012147.1| GI16593 [Drosophila mojavensis]
gi|193918411|gb|EDW17278.1| GI16593 [Drosophila mojavensis]
Length = 292
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL+ EAL NNPKIEV +G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESL
Sbjct: 111 WLAGEALNNNPKIEVTPDGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILLEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +DE+FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDEEFQKLWRSATVDAM 224
>gi|194747415|ref|XP_001956147.1| GF25060 [Drosophila ananassae]
gi|190623429|gb|EDV38953.1| GF25060 [Drosophila ananassae]
Length = 292
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WLS EAL NNPKI+V G+K+ FKPV+KIKD K L++LLKQHDLKG+GG+LL+DV+ESL
Sbjct: 111 WLSGEALNNNPKIDVSPCGSKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGVLLEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +DEDFQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDEDFQKLWRSATVDAM 224
>gi|194866434|ref|XP_001971881.1| GG15217 [Drosophila erecta]
gi|190653664|gb|EDV50907.1| GG15217 [Drosophila erecta]
Length = 292
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +DE+FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDEEFQKLWRSATVDAM 224
>gi|289741027|gb|ADD19261.1| transcription initiation factor IIE beta subunit [Glossina
morsitans morsitans]
Length = 291
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL+ EAL NNPKI+V +G ++ FKPV+KIKD K LL+LLK HDLKG+GGILLDDV+ESL
Sbjct: 110 WLAAEALMNNPKIDVTPDGLRFTFKPVYKIKDGKSLLRLLKSHDLKGLGGILLDDVQESL 169
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EII++ RP DK+K++FYND++A +DE+FQKLWRS +VD M
Sbjct: 170 PHCEKVLKNRASEIIFIVRPIDKKKILFYNDRTANFTVDEEFQKLWRSATVDAM 223
>gi|17648009|ref|NP_523923.1| transcription factor IIEbeta, isoform A [Drosophila melanogaster]
gi|4098002|gb|AAD00188.1| TFIIE small subunit [Drosophila melanogaster]
gi|7292476|gb|AAF47880.1| transcription factor IIEbeta, isoform A [Drosophila melanogaster]
gi|66571252|gb|AAY51591.1| IP01109p [Drosophila melanogaster]
gi|220943316|gb|ACL84201.1| TfIIEbeta-PA [synthetic construct]
gi|220953358|gb|ACL89222.1| TfIIEbeta-PA [synthetic construct]
Length = 292
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI++V RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRSAEILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|195587738|ref|XP_002083618.1| GD13833 [Drosophila simulans]
gi|194195627|gb|EDX09203.1| GD13833 [Drosophila simulans]
Length = 292
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI++V RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRSAEILFVIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|195375106|ref|XP_002046344.1| GJ12845 [Drosophila virilis]
gi|194153502|gb|EDW68686.1| GJ12845 [Drosophila virilis]
Length = 292
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 95/114 (83%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVI-EGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WLS EAL NNPKI+V +G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESL
Sbjct: 111 WLSGEALHNNPKIDVTPDGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILLEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|195337423|ref|XP_002035328.1| GM14648 [Drosophila sechellia]
gi|194128421|gb|EDW50464.1| GM14648 [Drosophila sechellia]
Length = 292
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI++V RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRSAEILFVIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|281365637|ref|NP_001163346.1| transcription factor IIEbeta, isoform B [Drosophila melanogaster]
gi|272455047|gb|ACZ94618.1| transcription factor IIEbeta, isoform B [Drosophila melanogaster]
Length = 249
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 68 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 127
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI++V RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 128 PHCEKVLKNRSAEILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 181
>gi|170057259|ref|XP_001864405.1| transcription initiation factor IIE subunit beta [Culex
quinquefasciatus]
gi|167876727|gb|EDS40110.1| transcription initiation factor IIE subunit beta [Culex
quinquefasciatus]
Length = 295
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL EAL+NNPKIE +++FK V+KIKD K LL+LLKQ DLKG+GG+LLDDV+ESLP
Sbjct: 109 WLQGEALKNNPKIEATPDGRFMFKAVYKIKDGKSLLRLLKQQDLKGLGGVLLDDVQESLP 168
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
HCEK LKN EI+++TRP DK+KV+FYND+SA ++EDF KLWRS++VD M
Sbjct: 169 HCEKVLKNRASEIVFITRPNDKKKVLFYNDRSANFQVEEDFVKLWRSVAVDAM 221
>gi|195491720|ref|XP_002093684.1| GE21436 [Drosophila yakuba]
gi|194179785|gb|EDW93396.1| GE21436 [Drosophila yakuba]
Length = 292
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|380017987|ref|XP_003692922.1| PREDICTED: general transcription factor IIE subunit 2-like [Apis
florea]
Length = 285
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESL
Sbjct: 112 QWLQTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESL 171
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+++TRP DK+K++FYNDK+AQ +D++FQKLWRS++VD M
Sbjct: 172 PHCDKHLKSLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRSVAVDAM 225
>gi|328785332|ref|XP_001120176.2| PREDICTED: general transcription factor IIE subunit 2-like [Apis
mellifera]
Length = 284
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESL
Sbjct: 111 QWLQTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESL 170
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+++TRP DK+K++FYNDK+AQ +D++FQKLWRS++VD M
Sbjct: 171 PHCDKHLKSLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRSVAVDAM 224
>gi|125977132|ref|XP_001352599.1| GA11796 [Drosophila pseudoobscura pseudoobscura]
gi|54641347|gb|EAL30097.1| GA11796 [Drosophila pseudoobscura pseudoobscura]
Length = 292
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WLS EAL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESL
Sbjct: 111 WLSGEALNNNPKIEVSPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILMEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|195168107|ref|XP_002024873.1| GL17873 [Drosophila persimilis]
gi|194108303|gb|EDW30346.1| GL17873 [Drosophila persimilis]
Length = 292
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WLS EAL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESL
Sbjct: 111 WLSGEALNNNPKIEVSPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILMEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>gi|383858287|ref|XP_003704633.1| PREDICTED: general transcription factor IIE subunit 2-like
[Megachile rotundata]
Length = 285
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESL
Sbjct: 112 QWLQTEALVKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESL 171
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD M
Sbjct: 172 PHCDKHLKSLQNEILFITRPMDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAM 225
>gi|195012197|ref|XP_001983523.1| GH15942 [Drosophila grimshawi]
gi|193897005|gb|EDV95871.1| GH15942 [Drosophila grimshawi]
Length = 292
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPKIE G K+ FKPV+KIKD K L++LLKQHDLKG+GGIL++DV+ESL
Sbjct: 111 WLASEALNNNPKIECTPCGTKFSFKPVYKIKDGKSLMRLLKQHDLKGLGGILMEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRAAEILFIIRPIDKKKILFYNDRTANFAVDDEFQKLWRSATVDAM 224
>gi|340716845|ref|XP_003396903.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIE
subunit 2-like [Bombus terrestris]
Length = 285
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESL
Sbjct: 112 QWLQTEALIKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESL 171
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD M
Sbjct: 172 PHCDKHLKSLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAM 225
>gi|350402907|ref|XP_003486642.1| PREDICTED: general transcription factor IIE subunit 2-like [Bombus
impatiens]
Length = 285
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NPKIEV +++FK ++KIKD+K LL+LLKQ DLKG+GGILL+D++ESL
Sbjct: 112 QWLQTEALIKNPKIEVTSDGRFVFKAMYKIKDKKSLLRLLKQQDLKGLGGILLEDIQESL 171
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LK NEI+++TRP DK+K++FYNDK+AQ +D++FQKLWR+++VD M
Sbjct: 172 PHCDKHLKSLQNEILFITRPLDKKKIVFYNDKTAQFPIDDEFQKLWRAVAVDAM 225
>gi|241625997|ref|XP_002407851.1| transcription initiation factor IIE, beta subunit, putative [Ixodes
scapularis]
gi|215501063|gb|EEC10557.1| transcription initiation factor IIE, beta subunit, putative [Ixodes
scapularis]
Length = 281
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 93/113 (82%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WLSTEALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+D++ESLP
Sbjct: 110 WLSTEALQNNPKLQVTPDNKYCFRPAYNLKDRKSLLRLLDKHDQRGMGGVLLEDIQESLP 169
Query: 63 HCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ E KAL + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+
Sbjct: 170 NVERHLKALGDAIIYVVRPVDKKKVLFYNDKSLQFTVDEEFQKLWRSVAVEGI 222
>gi|442749413|gb|JAA66866.1| Putative transcription initiation factor iie beta subunit [Ixodes
ricinus]
Length = 273
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 93/113 (82%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WLSTEALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+D++ESLP
Sbjct: 110 WLSTEALQNNPKLQVTPDNKYCFRPAYNLKDRKSLLRLLDKHDQRGMGGVLLEDIQESLP 169
Query: 63 HCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ E KAL + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+
Sbjct: 170 NVERHLKALGDAIIYVVRPVDKKKVLFYNDKSLQFTVDEEFQKLWRSVAVEGI 222
>gi|321477662|gb|EFX88620.1| hypothetical protein DAPPUDRAFT_206273 [Daphnia pulex]
Length = 280
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL +NPKI+V +Y+FKP ++I+DRKGLLKLL+Q DLKG GGILLDD++ESL
Sbjct: 110 QWLRTEALGSNPKIDVTSDGRYMFKPPYRIRDRKGLLKLLRQTDLKGFGGILLDDIQESL 169
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ EK LK +I+Y+TRP DK+K++FYNDK+A + +D++FQKLWRS++VDG+
Sbjct: 170 PNHEKVLKVLEKDIVYITRPIDKKKILFYNDKTAHMPIDDEFQKLWRSVAVDGI 223
>gi|195454715|ref|XP_002074368.1| GK10558 [Drosophila willistoni]
gi|194170453|gb|EDW85354.1| GK10558 [Drosophila willistoni]
Length = 292
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL+ EAL NNPKIEV G K+ FKPV+KIKD K L++LLKQHDLKG+GGILL+DV+ESL
Sbjct: 111 WLAGEALSNNPKIEVSSCGQKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLEDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHC+K LKN EI+++ RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCDKVLKNRAAEILFIIRPIDKKKILFYNDRTANFLVDDEFQKLWRSATVDAM 224
>gi|242020794|ref|XP_002430836.1| transcription initiation factor IIE subunit beta, putative
[Pediculus humanus corporis]
gi|212516039|gb|EEB18098.1| transcription initiation factor IIE subunit beta, putative
[Pediculus humanus corporis]
Length = 285
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NPK+EV K++FKP +K++D+K +LKLLK HDLKG+GGILL+D++ESL
Sbjct: 113 QWLLNEALIRNPKVEVTPEQKFLFKPPYKVRDKKSMLKLLKHHDLKGMGGILLEDIQESL 172
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+CEK L+ NEIIY+ RP DK+K++FYND++A L +DE+FQKLWR+++V+ M
Sbjct: 173 PNCEKILRILNNEIIYIQRPMDKKKILFYNDRTANLSIDEEFQKLWRAVAVESM 226
>gi|346468845|gb|AEO34267.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WLSTEALQNNPK++V KY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP
Sbjct: 109 WLSTEALQNNPKLQVTLDGKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLP 168
Query: 63 HCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ E KAL + IIYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+
Sbjct: 169 NVERHLKALGDSIIYVVRPVDKKKVLFYNDKSLQFSVDEEFQKLWRSVAVEGI 221
>gi|321471128|gb|EFX82101.1| hypothetical protein DAPPUDRAFT_210668 [Daphnia pulex]
Length = 280
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 93/113 (82%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL +NPKIE + +Y FKP +K++DRKGLLKLL+Q DLKG GGILL+D++ESLP
Sbjct: 111 WLKTEALGSNPKIETTQEGRYQFKPPYKVRDRKGLLKLLRQTDLKGYGGILLEDIQESLP 170
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ EK LK EI+Y+TRP DK+K++FYNDK+A + +D++FQKLWRS+ VDG+
Sbjct: 171 NHEKVLKLLDKEIVYITRPVDKKKILFYNDKTALMPIDDEFQKLWRSVPVDGI 223
>gi|427787975|gb|JAA59439.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 280
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL+TEALQNNPK++V KY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP
Sbjct: 109 WLATEALQNNPKLQVTHDGKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLP 168
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ E+ LK + +IYV RP DK+KV+FYNDKS Q +DE+FQKLWRS++V+G+
Sbjct: 169 NVERHLKVLGDSVIYVVRPVDKKKVLFYNDKSLQFSVDEEFQKLWRSVAVEGI 221
>gi|291240303|ref|XP_002740059.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa-like isoform 1 [Saccoglossus kowalevskii]
Length = 285
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 5/115 (4%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL NNPKI+V E NKY FKP + ++ RK LL+LL +HD KG+GGILL+D++ESLP
Sbjct: 114 WLITEALCNNPKIQVSESNKYSFKPKYNLRGRKDLLRLLDRHDQKGLGGILLEDIQESLP 173
Query: 63 HCEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
EKA+K N+II V RP DK+K++FYNDKS Q +DEDFQKLWRSI+VD +
Sbjct: 174 MAEKAVKVLERMNQIIIVVRPVDKKKILFYNDKSCQFTVDEDFQKLWRSIAVDSL 228
>gi|156540796|ref|XP_001600678.1| PREDICTED: transcription initiation factor IIE subunit beta-like
isoform 1 [Nasonia vitripennis]
gi|345487530|ref|XP_003425712.1| PREDICTED: transcription initiation factor IIE subunit beta-like
isoform 2 [Nasonia vitripennis]
Length = 284
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 91/114 (79%), Gaps = 3/114 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NPKI+ K+ FK +KIKD+K LL+LLKQHDLKG+GGILL+D++ESL
Sbjct: 111 QWLLMEALPTNPKIDTNNEGKFTFKAQYKIKDKKSLLRLLKQHDLKGLGGILLEDIQESL 170
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PH E+ LK NE++Y+TR DK+K++FYNDK+AQ +DE+FQKLWR+++VD M
Sbjct: 171 PHSERHLKHLANELLYITRAQDKKKIVFYNDKTAQFPVDEEFQKLWRAVAVDAM 224
>gi|291240305|ref|XP_002740060.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa-like isoform 2 [Saccoglossus kowalevskii]
Length = 281
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL NNPKI+V E NKY FKP + ++ RK LL+LL +HD KG+GGILL+D++ESLP
Sbjct: 110 WLITEALCNNPKIQVSESNKYSFKPKYNLRGRKDLLRLLDRHDQKGLGGILLEDIQESLP 169
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
EKA+K ++II V RP DK+K++FYNDKS Q +DEDFQKLWRSI+VD +
Sbjct: 170 MAEKAVKILGDQIIIVVRPVDKKKILFYNDKSCQFTVDEDFQKLWRSIAVDSL 222
>gi|189239625|ref|XP_970060.2| PREDICTED: similar to Transcription factor IIEbeta CG1276-PA
[Tribolium castaneum]
gi|270009449|gb|EFA05897.1| hypothetical protein TcasGA2_TC008709 [Tribolium castaneum]
Length = 291
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 97/116 (83%), Gaps = 5/116 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL +NPKIEV K++FK +K+KDRK LLKLLKQ DLKG+GG+LLDDV+ESL
Sbjct: 109 QWLQTEALVDNPKIEVTPDGKFLFKAPYKLKDRKSLLKLLKQQDLKGLGGVLLDDVQESL 168
Query: 62 PHCEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEKALK NEII++TRP DK+KV+FYND++A L +DE+FQKLWRS++VD M
Sbjct: 169 PHCEKALKILQNQNEIIFITRPIDKKKVLFYNDRTATLPIDEEFQKLWRSVAVDAM 224
>gi|383412193|gb|AFH29310.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
Length = 291
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 95/114 (83%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|386781278|ref|NP_001247856.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Macaca
mulatta]
gi|355697846|gb|EHH28394.1| Transcription initiation factor IIE subunit beta [Macaca mulatta]
gi|355779617|gb|EHH64093.1| Transcription initiation factor IIE subunit beta [Macaca
fascicularis]
gi|380812118|gb|AFE77934.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
gi|384940422|gb|AFI33816.1| transcription initiation factor IIE subunit beta [Macaca mulatta]
Length = 291
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 95/114 (83%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|402877932|ref|XP_003902662.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIE
subunit beta [Papio anubis]
Length = 308
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 95/114 (83%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 134 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 192
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 193 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 245
>gi|4504195|ref|NP_002086.1| transcription initiation factor IIE subunit beta [Homo sapiens]
gi|114619590|ref|XP_001168104.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Pan troglodytes]
gi|397521466|ref|XP_003830816.1| PREDICTED: transcription initiation factor IIE subunit beta [Pan
paniscus]
gi|135232|sp|P29084.1|T2EB_HUMAN RecName: Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta; AltName: Full=General transcription
factor IIE subunit 2
gi|37070|emb|CAA45069.1| transcription factor TFIIE beta [Homo sapiens]
gi|239580|gb|AAB20414.1| general transcription factor IIE 34 kda subunit [Homo sapiens]
gi|21040507|gb|AAH30572.1| General transcription factor IIE, polypeptide 2, beta 34kDa [Homo
sapiens]
gi|119583850|gb|EAW63446.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_a [Homo sapiens]
gi|119583853|gb|EAW63449.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_a [Homo sapiens]
gi|208966362|dbj|BAG73195.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[synthetic construct]
gi|410207486|gb|JAA00962.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410263916|gb|JAA19924.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410296794|gb|JAA26997.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
gi|410331247|gb|JAA34570.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Pan
troglodytes]
Length = 291
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|54696420|gb|AAV38582.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[synthetic construct]
gi|60810069|gb|AAX36090.1| general transcription factor IIE polypeptide 2 [synthetic
construct]
gi|61366471|gb|AAX42864.1| general transcription factor IIE polypeptide 2 beta [synthetic
construct]
Length = 292
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|332240826|ref|XP_003269588.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Nomascus leucogenys]
gi|441621183|ref|XP_004088734.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
2 [Nomascus leucogenys]
Length = 291
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|296221930|ref|XP_002756965.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
1 [Callithrix jacchus]
gi|296221932|ref|XP_002756966.1| PREDICTED: transcription initiation factor IIE subunit beta isoform
2 [Callithrix jacchus]
Length = 291
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|403294312|ref|XP_003938138.1| PREDICTED: transcription initiation factor IIE subunit beta
[Saimiri boliviensis boliviensis]
Length = 291
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|240848669|ref|NP_001155552.1| transcription initiation factor IIE subunit beta-like
[Acyrthosiphon pisum]
gi|239799422|dbj|BAH70632.1| ACYPI003970 [Acyrthosiphon pisum]
Length = 287
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 95/113 (84%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL NPKIE KY+FKP +K+KDRK LLKLLKQ DLKG+GGI++DD++ESLP
Sbjct: 116 WLETEALPGNPKIERTPDGKYMFKPPYKLKDRKALLKLLKQQDLKGLGGIMMDDIQESLP 175
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+CEKALK NEI+YV RP DK+KVMFYNDKSA +D++EDF+K+WRSI+V+ M
Sbjct: 176 NCEKALKHLQNEILYVCRPGDKKKVMFYNDKSATIDINEDFKKMWRSIAVENM 228
>gi|332374850|gb|AEE62566.1| unknown [Dendroctonus ponderosae]
Length = 292
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 97/116 (83%), Gaps = 5/116 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV KY+FK +K+KDRK LLKLLKQ DLKG+GGILL++V+ESL
Sbjct: 110 QWLQTEALGNNPKIEVSPDGKYLFKATYKLKDRKSLLKLLKQQDLKGLGGILLEEVQESL 169
Query: 62 PHCEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEKALK N+II+V RP DK+K++FYND++AQ+ +D++FQKLWRS++VD M
Sbjct: 170 PHCEKALKILSNQNDIIFVARPMDKKKILFYNDRTAQMPIDDEFQKLWRSVAVDAM 225
>gi|395541847|ref|XP_003772848.1| PREDICTED: general transcription factor IIE subunit 2-like
[Sarcophilus harrisii]
Length = 245
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 70 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 128
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+VTRP DK+K++F+NDKS Q +DE+FQKLWRSI+VD M
Sbjct: 129 PNAQKAIKALGDQIIFVTRP-DKKKILFFNDKSCQFTVDEEFQKLWRSITVDSM 181
>gi|395739554|ref|XP_002819014.2| PREDICTED: transcription initiation factor IIE subunit beta [Pongo
abelii]
Length = 247
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 73 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 131
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 132 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 184
>gi|395850277|ref|XP_003797720.1| PREDICTED: general transcription factor IIE subunit 2-like
[Otolemur garnettii]
Length = 292
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|327279883|ref|XP_003224685.1| PREDICTED: general transcription factor IIE subunit 2-like [Anolis
carolinensis]
Length = 290
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD M
Sbjct: 175 PNAQKAIKALGDQIIFVTRP-DKKKILFYNDKSCQFSVDEEFQKLWRSVPVDSM 227
>gi|11611843|gb|AAG39077.1| general transcription factor [Homo sapiens]
Length = 291
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYXVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNXQKAVKAXGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|126330761|ref|XP_001372577.1| PREDICTED: general transcription factor IIE subunit 2-like
[Monodelphis domestica]
Length = 291
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+VTRP DK+K++F+NDKS Q +DE+FQKLWRSI+VD M
Sbjct: 175 PNAQKAIKALGDQIIFVTRP-DKKKILFFNDKSCQFTVDEEFQKLWRSITVDSM 227
>gi|291386100|ref|XP_002709584.1| PREDICTED: general transcription factor IIE, polypeptide 2, beta
34kDa [Oryctolagus cuniculus]
Length = 253
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 79 QWLMTEALVNNPKIEVIDG-KYAFKPKYDLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 137
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 138 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 190
>gi|387916104|gb|AFK11661.1| general transcription factor IIE subunit 2-like protein
[Callorhinchus milii]
Length = 289
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKI+V++G KY+FKP + +KD+K LL+LL +HD +G+GGILLDD+ E L
Sbjct: 111 QWLMSEALINNPKIDVLDG-KYVFKPKYNLKDKKALLRLLDKHDQRGLGGILLDDIEEGL 169
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+VTRP DK+K++FYNDKS Q +DE+FQKLWR I VD M
Sbjct: 170 PNSQKAIKALGDQIIFVTRP-DKKKILFYNDKSCQFTMDEEFQKLWRGIPVDSM 222
>gi|351701273|gb|EHB04192.1| General transcription factor IIE subunit 2 [Heterocephalus glaber]
Length = 292
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD++ LL+LL QHD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVIDG-KYAFKPKYDLKDKRALLRLLDQHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|431902281|gb|ELK08782.1| General transcription factor IIE subunit 2 [Pteropus alecto]
Length = 293
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|345315933|ref|XP_001520210.2| PREDICTED: general transcription factor IIE subunit 2-like, partial
[Ornithorhynchus anatinus]
Length = 298
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 61 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 119
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+VTRP DK+K++F+NDKS Q +DE+FQKLWRSI VD M
Sbjct: 120 PNAQKAIKALGDQIIFVTRP-DKKKILFFNDKSCQFTVDEEFQKLWRSIPVDSM 172
>gi|348578306|ref|XP_003474924.1| PREDICTED: general transcription factor IIE subunit 2-like [Cavia
porcellus]
Length = 293
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD++ LL+LL QHD +G+GGILL+D+ E L
Sbjct: 119 QWLMTEALVNNPKIEVIDG-KYAFKPKYDLKDKRALLRLLDQHDQRGLGGILLEDIEEGL 177
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 178 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 230
>gi|359321502|ref|XP_003639611.1| PREDICTED: general transcription factor IIE subunit 2-like [Canis
lupus familiaris]
Length = 291
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|260809705|ref|XP_002599645.1| hypothetical protein BRAFLDRAFT_276804 [Branchiostoma floridae]
gi|229284926|gb|EEN55657.1| hypothetical protein BRAFLDRAFT_276804 [Branchiostoma floridae]
Length = 298
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 96/136 (70%), Gaps = 7/136 (5%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL NNPKI+ + K++FKP + +KD+K LL+LL +HD G+GGILL+DV+E LP
Sbjct: 118 WLGTEALPNNPKIQRLPDGKFVFKPKYHMKDKKALLRLLDKHDQNGLGGILLEDVQEGLP 177
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM----ILR 115
EKA+K + ++ +TRP DK+KV+FYNDK QL++DE+ QKLWRS++VD M I
Sbjct: 178 KYEKAIKALGDRVLTITRPIDKKKVLFYNDKDCQLNIDEEIQKLWRSVAVDSMDEKKIEE 237
Query: 116 IRSFYGVDYFSGAGEK 131
+ G+ Y G+K
Sbjct: 238 YLNRQGISYVQDTGKK 253
>gi|147902228|ref|NP_001089256.1| general transcription factor IIE subunit 2 [Xenopus laevis]
gi|267060|sp|P29540.1|T2EB_XENLA RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|65133|emb|CAA78245.1| transcription factor TFIIE-beta [Xenopus laevis]
gi|58403336|gb|AAH89287.1| MGC84983 protein [Xenopus laevis]
Length = 288
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIE+I+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 114 QWLMSEALVNNPKIEIIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 172
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD M
Sbjct: 173 PNAQKAIKALGDQIVFVTRP-DKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSM 225
>gi|417398448|gb|JAA46257.1| Putative proteinral transcription factor iie subunit [Desmodus
rotundus]
Length = 291
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 94/114 (82%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|62858005|ref|NP_001016555.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
gi|89271975|emb|CAJ82261.1| general transcription factor IIE, polypeptide 2, beta [Xenopus
(Silurana) tropicalis]
gi|213624256|gb|AAI70853.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
gi|213627171|gb|AAI70851.1| general transcription factor IIE, polypeptide 2, beta 34kDa
[Xenopus (Silurana) tropicalis]
Length = 288
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIE+I+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 114 QWLMSEALVNNPKIEIIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 172
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++VTRP DK+K++FYNDKS Q +DE+FQKLWRS+ VD M
Sbjct: 173 PNSQKAIKALGDQIVFVTRP-DKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSM 225
>gi|410956135|ref|XP_003984700.1| PREDICTED: general transcription factor IIE subunit 2-like [Felis
catus]
Length = 291
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAIKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|449283378|gb|EMC90037.1| General transcription factor IIE subunit 2 [Columba livia]
Length = 291
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 92/114 (80%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+V RP DK+K++FYNDKS Q +DE+FQKLWRSI VD M
Sbjct: 175 PNAQKAIKALGDQIIFVNRP-DKKKILFYNDKSCQFTVDEEFQKLWRSIPVDSM 227
>gi|114051554|ref|NP_001039530.1| general transcription factor IIE subunit 2 [Bos taurus]
gi|118573899|sp|Q2KJF9.1|T2EB_BOVIN RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|86821359|gb|AAI05363.1| General transcription factor IIE, polypeptide 2, beta 34kDa [Bos
taurus]
Length = 289
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>gi|301770905|ref|XP_002920868.1| PREDICTED: general transcription factor IIE subunit 2-like
[Ailuropoda melanoleuca]
gi|281347422|gb|EFB23006.1| hypothetical protein PANDA_009680 [Ailuropoda melanoleuca]
Length = 290
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 175 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 227
>gi|296472383|tpg|DAA14498.1| TPA: general transcription factor IIE subunit 2 [Bos taurus]
gi|440895025|gb|ELR47323.1| General transcription factor IIE subunit 2 [Bos grunniens mutus]
Length = 289
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>gi|426256356|ref|XP_004021806.1| PREDICTED: general transcription factor IIE subunit 2-like [Ovis
aries]
Length = 289
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>gi|149742593|ref|XP_001495603.1| PREDICTED: general transcription factor IIE subunit 2-like [Equus
caballus]
Length = 290
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 175 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 227
>gi|12841072|dbj|BAB25066.1| unnamed protein product [Mus musculus]
Length = 292
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|164518917|ref|NP_001100788.2| general transcription factor II E, polypeptide 2 (beta subunit)
[Rattus norvegicus]
Length = 291
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|268838606|ref|NP_080860.3| general transcription factor IIE subunit 2 [Mus musculus]
gi|268838637|ref|NP_001161393.1| general transcription factor IIE subunit 2 [Mus musculus]
gi|268838784|ref|NP_001161394.1| general transcription factor IIE subunit 2 [Mus musculus]
gi|62901050|sp|Q9D902.2|T2EB_MOUSE RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|18043581|gb|AAH20016.1| General transcription factor II E, polypeptide 2 (beta subunit)
[Mus musculus]
gi|74142361|dbj|BAE31938.1| unnamed protein product [Mus musculus]
gi|74182609|dbj|BAE34662.1| unnamed protein product [Mus musculus]
gi|74219536|dbj|BAE29539.1| unnamed protein product [Mus musculus]
Length = 292
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|349501098|ref|NP_001231790.1| general transcription factor IIE, polypeptide 2, beta 34kDa [Sus
scrofa]
Length = 291
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|228300|prf||1802389A transcription factor IIE:SUBUNIT=beta
Length = 291
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIE I+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIENIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|355693882|gb|AER99484.1| proteinral transcription factor IIE, polypeptide 2, beta 34kDa
[Mustela putorius furo]
Length = 292
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 119 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 177
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 178 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 230
>gi|354474939|ref|XP_003499687.1| PREDICTED: general transcription factor IIE subunit 2-like
[Cricetulus griseus]
gi|344242333|gb|EGV98436.1| General transcription factor IIE subunit 2 [Cricetulus griseus]
Length = 291
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 92/114 (80%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|74147011|dbj|BAE27444.1| unnamed protein product [Mus musculus]
Length = 281
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>gi|344281666|ref|XP_003412599.1| PREDICTED: general transcription factor IIE subunit 2-like
[Loxodonta africana]
Length = 291
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 92/114 (80%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSHKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|432099991|gb|ELK28885.1| General transcription factor IIE subunit 2 [Myotis davidii]
Length = 311
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 137 QWLMSEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 195
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 196 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 248
>gi|228298|prf||1802387B transcription factor IIE:SUBUNIT=small 34kD
Length = 291
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 92/114 (80%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIE I+G KY FKP + +D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALYNNPKIEYIDG-KYAFKPKYNYRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>gi|26353328|dbj|BAC40294.1| unnamed protein product [Mus musculus]
gi|148703471|gb|EDL35418.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703472|gb|EDL35419.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703473|gb|EDL35420.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
gi|148703475|gb|EDL35422.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_a [Mus musculus]
Length = 292
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++V+ M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVESM 229
>gi|224049137|ref|XP_002196086.1| PREDICTED: general transcription factor IIE subunit 2-like
[Taeniopygia guttata]
Length = 291
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 91/114 (79%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 116 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+V RP DK+K++FYNDKS +DE+FQKLWRSI VD M
Sbjct: 175 PNAQKAIKALGDQIIFVNRP-DKKKILFYNDKSCHFAVDEEFQKLWRSIPVDSM 227
>gi|148703474|gb|EDL35421.1| general transcription factor II E, polypeptide 2 (beta subunit),
isoform CRA_b [Mus musculus]
Length = 207
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 93/114 (81%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 33 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 91
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++V+ M
Sbjct: 92 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVESM 144
>gi|225706730|gb|ACO09211.1| Transcription initiation factor IIE subunit beta [Osmerus mordax]
Length = 290
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NN KIEV +G KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 115 QWLMTEALANNAKIEVRDG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q D+DE+FQKLWRSI VD M
Sbjct: 174 PNSAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFDVDEEFQKLWRSIPVDSM 226
>gi|391339359|ref|XP_003744019.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Metaseiulus occidentalis]
Length = 280
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL EAL++NPKIEV E KY F+P + I+DR+ L KLL++HD +G+GGILLDD+RES+
Sbjct: 109 WLEQEALKSNPKIEVTEDGKYKFRPPYNIRDRRSLFKLLEKHDQRGLGGILLDDIRESMA 168
Query: 63 HCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
H + K L++ ++YVTRP DK+ V+FYNDKS QL++DE QK+ RS++ DG+
Sbjct: 169 HVDVVLKKLEDSVLYVTRPTDKKVVLFYNDKSVQLNVDEYLQKVLRSVATDGV 221
>gi|405960442|gb|EKC26367.1| Transcription initiation factor IIE subunit beta [Crassostrea
gigas]
Length = 285
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 87/114 (76%), Gaps = 4/114 (3%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL TEAL NNPKI V+E G KY FKP F I+D+ L+KLLK HDL G+GG++ +DV ESL
Sbjct: 113 WLITEALNNNPKIRVLENGQKYAFKPKFDIRDKTSLMKLLKNHDLHGLGGVMKEDVEESL 172
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ EK+LK+ II + RP DK++++FYNDK + +DE+FQK+WR +SVDG+
Sbjct: 173 PNAEKSLKSLGEHIITIVRPNDKKEILFYNDKYCRYKIDEEFQKMWRGVSVDGL 226
>gi|339522229|gb|AEJ84279.1| general transcription factor IIE subunit 2 [Capra hircus]
Length = 289
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 92/114 (80%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNP+IEV +G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPQIEVGDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>gi|426359272|ref|XP_004046904.1| PREDICTED: transcription initiation factor IIE subunit beta
[Gorilla gorilla gorilla]
Length = 257
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Query: 1 MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 60
+ ++ +AL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+
Sbjct: 82 VNYMKLQALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEA 140
Query: 61 LPHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
LP+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 141 LPNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 194
>gi|432844438|ref|XP_004065769.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
1 [Oryzias latipes]
gi|432844440|ref|XP_004065770.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
2 [Oryzias latipes]
Length = 287
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 87/113 (76%), Gaps = 5/113 (4%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL NNPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LLDDV E LP
Sbjct: 113 WLMTEALVNNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLDDVEEGLP 171
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 172 NAAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFQKLWRSVPVDSI 223
>gi|308321341|gb|ADO27822.1| general transcription factor IIe subunit 2 [Ictalurus furcatus]
Length = 289
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD +G+GG+LLDDV E L
Sbjct: 114 QWLMTEALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQQGLGGVLLDDVEEGL 172
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+V RP DK+K++FYNDK ++DE+FQKLWRS+ VD +
Sbjct: 173 PNAAKAIKALGDQIIFVARP-DKKKILFYNDKHCHFEVDEEFQKLWRSVPVDSI 225
>gi|47086579|ref|NP_997896.1| general transcription factor IIE, polypeptide 2, beta [Danio rerio]
gi|45501211|gb|AAH67173.1| General transcription factor IIE, polypeptide 2, beta [Danio rerio]
Length = 291
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 116 QWLMSEALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 175 PNAAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFVVDEEFQKLWRSVPVDSI 227
>gi|410926263|ref|XP_003976598.1| PREDICTED: general transcription factor IIE subunit 2-like
[Takifugu rubripes]
Length = 285
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NNPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 111 QWLMNEALVNNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLDDVEEGL 169
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 170 PNSAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFQKLWRSVPVDSI 222
>gi|444516844|gb|ELV11296.1| Glutathione reductase, mitochondrial [Tupaia chinensis]
Length = 524
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 89/109 (81%), Gaps = 5/109 (4%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
+AL NNPKIEV++G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E LP+ +K
Sbjct: 355 KALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNSQK 413
Query: 67 ALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
A+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 414 AVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 461
>gi|47213038|emb|CAF93447.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NNPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 33 QWLMNEALLNNPKIEVRDG-MYGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLDDVEEGL 91
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRSI VD +
Sbjct: 92 PNFAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFQKLWRSIPVDSI 144
>gi|326918482|ref|XP_003205517.1| PREDICTED: general transcription factor IIE subunit 2-like
[Meleagris gallopavo]
Length = 290
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NNPKIEVI+G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E L
Sbjct: 116 QWLMNEALVNNPKIEVIDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +
Sbjct: 175 PNAHKAIKALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSI 227
>gi|12861985|dbj|BAB32319.1| unnamed protein product [Mus musculus]
Length = 292
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I+ V+RP DK+K++F+ND + + DE+FQ LWRS++VD M
Sbjct: 177 PNSQKAVKGLGDQILXVSRP-DKKKILFFNDNTLSVFWDEEFQXLWRSVAVDSM 229
>gi|348529470|ref|XP_003452236.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
1 [Oreochromis niloticus]
Length = 297
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E L
Sbjct: 122 QWLMNEALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGL 180
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 181 PNSAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSI 233
>gi|348529474|ref|XP_003452238.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
3 [Oreochromis niloticus]
Length = 287
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E L
Sbjct: 112 QWLMNEALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGL 170
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 171 PNSAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSI 223
>gi|348529472|ref|XP_003452237.1| PREDICTED: general transcription factor IIE subunit 2-like isoform
2 [Oreochromis niloticus]
Length = 287
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 87/114 (76%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL +NPKIEV +G Y FKP + +KD+K LL+LL +HD G+GG+LL+DV E L
Sbjct: 112 QWLMNEALVSNPKIEVRDGT-YGFKPKYNLKDKKALLRLLDKHDQLGLGGVLLEDVEEGL 170
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 171 PNSAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFAVDEEFQKLWRSVPVDSI 223
>gi|118089935|ref|XP_001233400.1| PREDICTED: general transcription factor IIE subunit 2 isoform 1
[Gallus gallus]
gi|363733352|ref|XP_003641238.1| PREDICTED: general transcription factor IIE subunit 2 isoform 2
[Gallus gallus]
gi|53136302|emb|CAG32502.1| hypothetical protein RCJMB04_27j8 [Gallus gallus]
Length = 290
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NNPKIEV++G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E L
Sbjct: 116 QWLMNEALVNNPKIEVVDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +
Sbjct: 175 PNAHKAIKALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSI 227
>gi|290462651|gb|ADD24373.1| Transcription initiation factor IIE subunit beta [Lepeophtheirus
salmonis]
Length = 215
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 6/114 (5%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL TEAL+NNPKIEV G YIFK + + +K L+KLLK HDLKG+GGI L+D+ ESLP
Sbjct: 34 WLFTEALKNNPKIEVKNGT-YIFKAPYNVTSKKTLIKLLKHHDLKGLGGIFLEDLAESLP 92
Query: 63 HCEKALKN-----EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDG 111
C+K ++N +I+ ++R AD++KV+F D S + +DE+F+KLWRS++V+G
Sbjct: 93 KCDKIIRNLLDDEKIVIISRSADRKKVVFLLDPSVDIQVDEEFRKLWRSVAVEG 146
>gi|256085803|ref|XP_002579101.1| hypothetical protein [Schistosoma mansoni]
gi|360044418|emb|CCD81966.1| hypothetical protein Smp_079910 [Schistosoma mansoni]
Length = 289
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 1 MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 60
+KWL EAL NNPKI V K++FKP + I+ RK L +LL++ +LKG+GGI LDD+ ES
Sbjct: 110 VKWLEEEALPNNPKIRVTTDAKFVFKPRYDIRTRKDLYQLLRRQELKGLGGIYLDDLTES 169
Query: 61 LPHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+P EK L + +I + P DK+ ++FYNDKS L++DE+F++ WRS+SV+G+
Sbjct: 170 VPDVEKILNSFGDHVIRIVTPHDKKTILFYNDKSFDLNVDEEFKQQWRSVSVEGV 224
>gi|358339845|dbj|GAA47831.1| transcription initiation factor TFIIE subunit beta [Clonorchis
sinensis]
Length = 897
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 1 MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 60
++WL EAL NNPKI V K++F+P + I+ R+ L +LLK+H+LKG+GG+ LDD+ E
Sbjct: 719 IRWLEDEALPNNPKIRVTPDRKFVFRPRYDIRTRQDLYQLLKRHELKGLGGVYLDDIAEC 778
Query: 61 LPHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+P EK + + +I + P DK+ ++FYNDK+ L++DE F++ WR++SV+G+
Sbjct: 779 IPDAEKVVNGFGDHVIRIVTPHDKKTILFYNDKTFDLNIDEVFKQQWRAVSVEGI 833
>gi|56756723|gb|AAW26533.1| SJCHGC05808 protein [Schistosoma japonicum]
gi|226480622|emb|CAX73408.1| general transcription factor IIE, polypeptide 2 [Schistosoma
japonicum]
Length = 295
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
Query: 1 MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 60
+KWL EAL NNPKI V K++F+P + I+ RK L +LL++ +LKG+GGI LDD+ ES
Sbjct: 116 IKWLEDEALPNNPKIRVTADAKFVFRPRYDIRTRKDLYQLLRRQELKGLGGIYLDDLTES 175
Query: 61 LPHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+P EK L + +I + P DK+ ++FYNDKS L++DE+F++ WRS+SV+G+
Sbjct: 176 VPDVEKILNSFGDHVIRIVTPHDKKTILFYNDKSFDLNVDEEFKQQWRSVSVEGV 230
>gi|213514012|ref|NP_001133195.1| general transcription factor IIE, polypeptide 2-1 [Salmo salar]
gi|197632437|gb|ACH70942.1| general transcription factor IIE, polypeptide 2-1 [Salmo salar]
Length = 288
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 88/114 (77%), Gaps = 5/114 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL +NPKIEV +G KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 114 QWLMTEALASNPKIEVRDG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGLLLDDVEEGL 172
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KALK ++II+VTRP DK+K++FYNDK Q +DE+F KLWRSI VD M
Sbjct: 173 PNSAKALKVLGDQIIFVTRP-DKKKILFYNDKHCQFTVDEEFTKLWRSIPVDSM 225
>gi|119583851|gb|EAW63447.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_b [Homo sapiens]
Length = 220
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 83/105 (79%), Gaps = 5/105 (4%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKL 103
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE + +
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEGWSAM 219
>gi|449673855|ref|XP_004208048.1| PREDICTED: general transcription factor IIE subunit 2-like [Hydra
magnipapillata]
Length = 293
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 97/140 (69%), Gaps = 8/140 (5%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL+ E+L+NNPKI + + +KY FKP + ++D+K L++LL++HD G+GG+LLDDVRE L
Sbjct: 121 EWLADESLKNNPKI-LFKDDKYSFKPKYALRDKKSLIRLLEKHDQSGLGGVLLDDVREGL 179
Query: 62 PHCE---KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM----IL 114
P+ + K++ ++I++VTR DK+ ++FY D S + +DE+ QK WRS++V+G+ I
Sbjct: 180 PNADEIVKSISDKIMFVTRSNDKKAILFYYDSSYAVHVDEENQKHWRSVAVEGLAEPDIE 239
Query: 115 RIRSFYGVDYFSGAGEKAEK 134
+ S G+ +G +K
Sbjct: 240 KYLSNCGISTMTGVSSALQK 259
>gi|115914024|ref|XP_786458.2| PREDICTED: general transcription factor IIE subunit 2-like
[Strongylocentrotus purpuratus]
Length = 286
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 88/115 (76%), Gaps = 7/115 (6%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL EAL NNPK+ + +G KY+FKP F +++RK +++LLK+HD +G+GGI+++DV ESLP
Sbjct: 114 WLINEALPNNPKVSLEDG-KYLFKPAFNVRNRKEMVRLLKRHDQRGLGGIMMEDVMESLP 172
Query: 63 HCEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
H + ++ EII +T+P DK+KV++YND++ +L ++E+F++LW S +VD +
Sbjct: 173 HAKVGVEKLEKAGEIIVLTKP-DKKKVVYYNDRTFKLKIEEEFKELWNSTTVDSL 226
>gi|156353006|ref|XP_001622871.1| predicted protein [Nematostella vectensis]
gi|156209497|gb|EDO30771.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 85/113 (75%), Gaps = 4/113 (3%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL AL+ NPK+ +G K+ F P + I+D+K L+KLL++H+ +G GGILLDDVRESLP
Sbjct: 117 WLENNALKENPKLAFKDG-KFAFSPKYHIRDKKQLVKLLEKHEERGHGGILLDDVRESLP 175
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+K ++N I+++TR DK+ ++FYN+K ++++DE+FQK WR++SVDG+
Sbjct: 176 DADKIVRNVSSRIMFITRSCDKKVLLFYNNKGYKMEIDEEFQKHWRAVSVDGI 228
>gi|443734210|gb|ELU18282.1| hypothetical protein CAPTEDRAFT_218991 [Capitella teleta]
Length = 282
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL+TEAL+NNPKI V +K+ +KP F IK + L +LL++ ++G GGI +DDV ESLP
Sbjct: 107 WLNTEALRNNPKITVTLDDKFEYKPKFTIKGKDSLRRLLEKRCMRGQGGITMDDVEESLP 166
Query: 63 HCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ +KA+K ++++ V RP DK+ +++YNDKS +DE+ QKLWR+++V+G+
Sbjct: 167 NAQKAVKALGDQLLQVIRPIDKKVILYYNDKSTNFVVDEELQKLWRAVAVEGV 219
>gi|198431857|ref|XP_002128543.1| PREDICTED: similar to general transcription factor IIE, polypeptide
2, beta 34kDa [Ciona intestinalis]
Length = 285
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
Query: 3 WLSTEALQNNPKIEVIE---GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRE 59
WL EAL NNPKI+VI ++ FKP + IKD+K LLKLL +HD +G+GGI ++D+ E
Sbjct: 113 WLLNEALVNNPKIQVISEGAATQFSFKPKYNIKDKKALLKLLDRHDQRGLGGIRMEDIEE 172
Query: 60 SLPH---CEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
LP C K L ++I++VTRP DK++++FYNDKS + +DE+FQ+LWRS++VD +
Sbjct: 173 GLPRAKKCIKLLGDKILFVTRP-DKKQIVFYNDKSCEFPVDEEFQQLWRSVTVDSI 227
>gi|196002487|ref|XP_002111111.1| hypothetical protein TRIADDRAFT_54747 [Trichoplax adhaerens]
gi|190587062|gb|EDV27115.1| hypothetical protein TRIADDRAFT_54747 [Trichoplax adhaerens]
Length = 286
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL+ AL NN KI + +G K+ FKP F IK +K L + LK+ G+GG+ +DDV+ESLP
Sbjct: 110 WLAKHALVNNEKISIQDG-KFKFKPKFDIKSKKQLYRFLKKRYENGLGGVYIDDVKESLP 168
Query: 63 HCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRSF 119
+ E +KN + +TRP DK++V+++ND + D+ E+F++LW S+SVD + I +
Sbjct: 169 NSENIIKNLDDSVTILTRPNDKKQVIYFNDIKNKFDVSEEFKQLWYSVSVDVSEIDIEVY 228
Query: 120 Y---GVDYFSGAGEKAEKA 135
G+ +G KA
Sbjct: 229 LKKAGITVMEDSGRTKRKA 247
>gi|196476765|gb|ACG76247.1| general transcription factor IIE polypeptide 2 beta 34kDa-like
protein [Amblyomma americanum]
Length = 186
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL+TEALQNNPK++V NKY F+P + +KDRK LL+LL +HD +G+GG+LL+DV+ESLP
Sbjct: 109 WLATEALQNNPKLQVTLDNKYCFRPAYNLKDRKSLLRLLDKHDQRGLGGVLLEDVQESLP 168
Query: 63 HCE---KALKNEIIYVTR 77
+ E KAL + IIYV R
Sbjct: 169 NVERHLKALGDSIIYVVR 186
>gi|170592070|ref|XP_001900792.1| Transcription initiation factor IIE, beta subunit [Brugia malayi]
gi|158591659|gb|EDP30263.1| Transcription initiation factor IIE, beta subunit, putative [Brugia
malayi]
Length = 291
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL E+L NP++ V E KY+FKP +KIK + LL LLK++ ++G GGILL D+ E +P
Sbjct: 121 WLQ-ESLPTNPRLTVDENGKYLFKPPYKIKGKNSLLALLKKYHIEGRGGILLSDLNECIP 179
Query: 63 HCEK---ALKNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGM----I 113
EK AL N +I V +KRK V FYND ++DE F+ LWR+ SVD + I
Sbjct: 180 AAEKHIEALSNVVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKKI 239
Query: 114 LRIRSFYGVDYFSGAGEK 131
+G+D G K
Sbjct: 240 EEYLQKHGIDVMKDLGPK 257
>gi|402589647|gb|EJW83578.1| hypothetical protein WUBG_05512 [Wuchereria bancrofti]
Length = 289
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL E+L NP++ V E KY+FKP +KIK + LL LLK++ ++G GGILL D+ E +P
Sbjct: 119 WLQ-ESLPMNPRLTVDENGKYLFKPPYKIKGKNSLLALLKKYHIEGRGGILLSDLNECIP 177
Query: 63 HCEK---ALKNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGM----I 113
EK AL N +I V +KRK V FYND ++DE F+ LWR+ SVD + I
Sbjct: 178 AAEKHIEALSNVVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKKI 237
Query: 114 LRIRSFYGVDYFSGAGEK 131
+G+D G K
Sbjct: 238 EEYLQKHGIDVMKDLGPK 255
>gi|312085554|ref|XP_003144725.1| hypothetical protein LOAG_09149 [Loa loa]
gi|307760110|gb|EFO19344.1| hypothetical protein LOAG_09149 [Loa loa]
Length = 290
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 10/138 (7%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL E+L NP++ V E KY+FKP +KIK + LL LLK++ +G GGILL D+ E +P
Sbjct: 120 WLQ-ESLPMNPRLIVDENGKYLFKPPYKIKGKNSLLALLKKYHTEGRGGILLSDLNECIP 178
Query: 63 HCEK---ALKNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGM----I 113
EK AL N +I V +KRK V FYND ++DE F+ LWR+ SVD + I
Sbjct: 179 AAEKHIEALSNLVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKKI 238
Query: 114 LRIRSFYGVDYFSGAGEK 131
+G+D G K
Sbjct: 239 EEYLQKHGIDVMKDLGPK 256
>gi|393909215|gb|EJD75359.1| hypothetical protein, variant [Loa loa]
Length = 260
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 10/138 (7%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL E+L NP++ V E KY+FKP +KIK + LL LLK++ +G GGILL D+ E +P
Sbjct: 90 WLQ-ESLPMNPRLIVDENGKYLFKPPYKIKGKNSLLALLKKYHTEGRGGILLSDLNECIP 148
Query: 63 HCEK---ALKNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGM----I 113
EK AL N +I V +KRK V FYND ++DE F+ LWR+ SVD + I
Sbjct: 149 AAEKHIEALSNLVIDVQTMINKRKDHVYFYNDPDTDYEVDEKFKSLWRNASVDHLDEKKI 208
Query: 114 LRIRSFYGVDYFSGAGEK 131
+G+D G K
Sbjct: 209 EEYLQKHGIDVMKDLGPK 226
>gi|313235827|emb|CBY19811.1| unnamed protein product [Oikopleura dioica]
Length = 262
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 7 EALQNNPKIEVIEGN--KYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 63
+AL NPK+ I G+ KY ++P + I+D+K L+ L++H +G+GG+ + V+ESLP
Sbjct: 94 DALPKNPKLRQIPGDVVKYCYRPSIEGIRDKKSFLQFLERHYHEGLGGVTKEMVQESLPK 153
Query: 64 CEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+K LK I TRP DK+ V+F+ND+S ++++DE FQKLWRSI+V+ +
Sbjct: 154 ADKILKYHSEKKNIHVHTRP-DKKTVIFFNDRSLEIEMDETFQKLWRSITVESV 206
>gi|324510806|gb|ADY44513.1| General transcription factor IIE subunit 2 [Ascaris suum]
Length = 290
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLP 62
WL ++L NP++ V E K++FKP +K+K + LL LLK+H G GGILL D+ E +P
Sbjct: 121 WLQ-QSLPLNPRLSVDENGKFLFKPPYKVKGKNSLLALLKKHYQDGKGGILLSDLNECIP 179
Query: 63 HCEK---ALKNEIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+K AL N +I V A+KRK FYND +D++F+ LWR+ SVD +
Sbjct: 180 AADKHIEALGNVVIDVPTQANKRKDRAYFYNDPDTDYFIDDEFKGLWRNASVDHL 234
>gi|17534359|ref|NP_496466.1| Protein F54D5.11 [Caenorhabditis elegans]
gi|1638825|emb|CAA70049.1| TFIIE-beta protein [Caenorhabditis elegans]
gi|13548367|emb|CAA91336.2| Protein F54D5.11 [Caenorhabditis elegans]
Length = 289
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 7/112 (6%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYDA 181
Query: 67 ALK---NEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGM 112
L+ +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD +
Sbjct: 182 LLQQVSSEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVDHL 233
>gi|308509462|ref|XP_003116914.1| hypothetical protein CRE_01733 [Caenorhabditis remanei]
gi|308241828|gb|EFO85780.1| hypothetical protein CRE_01733 [Caenorhabditis remanei]
Length = 289
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP++ ++E +K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPRL-IMENDKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYDA 181
Query: 67 ALKN---EIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGM 112
L+ ++I V +K+K V+FYNDK +L++DF+ LWR++SVD +
Sbjct: 182 LLQQVAADVIVVPTQVNKKKDRVVFYNDKDFTFPELEDDFKALWRNVSVDHL 233
>gi|341888893|gb|EGT44828.1| hypothetical protein CAEBREN_22626 [Caenorhabditis brenneri]
Length = 289
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP++ ++EG+K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPRL-IMEGDKFAFRPPYKIKGKTSLVAVARKHHQDGKGGILVSDLAECVANYDA 181
Query: 67 ALKN---EIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGM 112
L+ ++I V +K+K V+F+ND +L++ F+ LWR +SVD +
Sbjct: 182 MLQQVSGDVIVVPTMVNKKKDRVVFFNDNEYTFPELEDSFKTLWRQVSVDHL 233
>gi|268531926|ref|XP_002631091.1| Hypothetical protein CBG02864 [Caenorhabditis briggsae]
Length = 289
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP + NK+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPHGDPT-MNKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYDA 181
Query: 67 ALKN---EIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVDGM 112
L+ +II V +K+K V+FYNDK +L++DF+ LWR++SVD +
Sbjct: 182 LLQQVAADIIVVPTQVNKKKDRVVFYNDKDFTFPELEDDFKALWRNVSVDHL 233
>gi|90085403|dbj|BAE91442.1| unnamed protein product [Macaca fascicularis]
Length = 196
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIG 50
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+G
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLG 164
>gi|349803255|gb|AEQ17100.1| putative general transcription factor polypeptide beta subunit
[Pipa carvalhoi]
Length = 102
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 5/59 (8%)
Query: 57 VRESLPHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+ E LP+ +KA+K ++I++VTRP DKRK FYNDKS Q +DE+FQKLWRS+ VD M
Sbjct: 1 IEEGLPNAQKAIKALGDQIVFVTRP-DKRKP-FYNDKSCQFTVDEEFQKLWRSVPVDSM 57
>gi|149057906|gb|EDM09149.1| general transcription factor II E, polypeptide 2 (beta subunit)
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 115
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 66 KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
KAL ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 7 KALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 52
>gi|119583852|gb|EAW63448.1| general transcription factor IIE, polypeptide 2, beta 34kDa,
isoform CRA_c [Homo sapiens]
Length = 194
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 66 KALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
KAL ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 86 KALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 131
>gi|389614513|dbj|BAM20304.1| transcription factor IIEbeta, partial [Papilio xuthus]
Length = 107
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 34/38 (89%)
Query: 75 VTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
+TRP DK+K++FYNDK+A+LD+DE+F KLWR+ +VD M
Sbjct: 1 ITRPTDKKKILFYNDKTAKLDVDEEFVKLWRATAVDAM 38
>gi|340370164|ref|XP_003383616.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Amphimedon queenslandica]
Length = 309
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 7 EALQNNPKIEVI-EGNKYIFKPVF--KIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 63
E L+ N KI E +++IF P +++ + LL L+ + KG+GG+ + D++E++P
Sbjct: 130 EELRRNRKIRYYSEADRFIFLPSLGHQVRSKTQLLAFLQDRESKGMGGVSITDLKEAIPQ 189
Query: 64 CEKALK--NEIIYVTRPADKRK---VMFYNDKSAQLDLDEDFQKLWRSISVDGMILR 115
EK L+ + I+ + ++ K V+FYN+ + +DE WR +SVDG R
Sbjct: 190 TEKVLRKLEKDIFRLKCGERDKNEEVVFYNNHDYDITVDESIVSQWRQVSVDGQSER 246
>gi|320163025|gb|EFW39924.1| hypothetical protein CAOG_00449 [Capsaspora owczarzaki ATCC 30864]
Length = 337
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 9 LQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI----LLDDVRESLPHC 64
L+ N I ++G K+ +KP + + + LL+LL+ + ++G+GGI LL RE+
Sbjct: 173 LEGNILINHVDG-KFRYKPKYAVGSKDELLELLRSYYMQGLGGIKQSELLQCYREAADDV 231
Query: 65 EKALKNEIIYVTRPADKRK-VMFYNDKSAQLDLDEDFQKLWRSISV 109
+ + IYV +P + ++FYND ++D+DE+F+ LW I +
Sbjct: 232 MQLQADNRIYVLKPTKGTEMILFYNDPRLRVDVDEEFKDLWSKIQL 277
>gi|330797975|ref|XP_003287032.1| hypothetical protein DICPUDRAFT_31794 [Dictyostelium purpureum]
gi|325082995|gb|EGC36460.1| hypothetical protein DICPUDRAFT_31794 [Dictyostelium purpureum]
Length = 282
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E L+NNPK+ +K+ +KP+F +K+ K +L+L+ +H GGIL D+ ES E
Sbjct: 113 ELLRNNPKVIDHGDDKFSYKPLFNVKNIKEILELVNKHP----GGILASDIAESYNQAEA 168
Query: 67 ALK----NEIIYVTRPADKRKV--MFYNDKSAQLDLDEDFQKLWRSISV 109
+K + +Y + +D + +F ND+ ++ + ++ +W+SI V
Sbjct: 169 DVKKLKETKQVYAIKSSDNTHIDMLFPNDEKYRVPVSQELIDMWKSIKV 217
>gi|281209241|gb|EFA83414.1| transcription initiation factor IIE2 [Polysphondylium pallidum
PN500]
Length = 259
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
+ L+ N K+E + +KP+ +KD +G+L+LL +H GI+L D++ES E+
Sbjct: 100 DQLKTNIKVEFLNDTTLCYKPLHNVKDDRGILELLSKHPY----GIMLSDLKESYLAVEQ 155
Query: 67 ALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSI 107
+K EI V +++FY+D+ ++ D LW+S+
Sbjct: 156 DVKKLKDSKEIYAVRNSESNSEMLFYSDEKYRIPCSSDLVDLWKSV 201
>gi|384498007|gb|EIE88498.1| hypothetical protein RO3G_13209 [Rhizopus delemar RA 99-880]
Length = 206
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 7 EALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 65
E L NN KIE N + +KP ++IK ++ LL LL + GG+ D+++S
Sbjct: 37 EKLVNNEKIEYDSVNNMFSYKPTYQIKSKEDLLSLLISK--RKEGGMDYKDLKDSYSKLS 94
Query: 66 KALKN----EIIYVTRPAD-KRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
A++ +I V R D +V+FYND +D DF+K+W IS+
Sbjct: 95 SAVEELAGEGVILVVRNKDGNPRVLFYNDAQYNTPIDADFKKMWSEISI 143
>gi|402220167|gb|EJU00239.1| hypothetical protein DACRYDRAFT_23212 [Dacryopinax sp. DJM-731 SS1]
Length = 337
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 9 LQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC---- 64
LQ++ I + N Y +KP F I++++ LL + +H +G GG+ + +RES P
Sbjct: 158 LQHDRVIHDTKTNTYSYKPDFNIRNKEQLLTEITRHYKRG-GGMSVKVIRESWPSAIPAI 216
Query: 65 -EKALKNEIIYVTRPA--DKRKVMFYND---KSAQLDLDEDFQKLWRSISV 109
E A + ++I VTR A + +++F+N+ + +D++FQ++W S V
Sbjct: 217 EELAARGDVI-VTRTAKDNTPRIVFFNEVPLEQGGGQIDKEFQEIWNSQKV 266
>gi|326427981|gb|EGD73551.1| hypothetical protein PTSG_05258 [Salpingoeca sp. ATCC 50818]
Length = 249
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 18 IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES-----LPHCEKALKNEI 72
+E F+P + +K+++ LL LK+ D KG+GG+ +D++ S L E K+ +
Sbjct: 66 LEDGYVAFQPTYDVKNKQELLDKLKEFDQKGLGGMRVDELDGSYDGVLLDVDELKAKDLV 125
Query: 73 IYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDG 111
+ D+ V+F+ D + ++ +D+ K WR SV G
Sbjct: 126 YCIHNKTDRVDVLFFKDPALRVHIDKAIVKRWRMESVQG 164
>gi|328866280|gb|EGG14665.1| transcription initiation factor IIE2 [Dictyostelium fasciculatum]
Length = 272
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 4 LSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH 63
L + L+ N K+E ++ FKP++++K + ++ LLK+ + +GI L+ + ES
Sbjct: 99 LVQDELKQNEKVEFLDSTTVRFKPLYRVKTPEEIVDLLKEENPRGIP---LNKLTESYAK 155
Query: 64 CEKALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+K EI + +++FYND+ ++ + ++ K+W++I +
Sbjct: 156 VGDDVKKLKESKEIYTIKNTELNTEILFYNDEKYRIPVSDELIKMWKNIPI 206
>gi|253722791|pdb|1D8J|A Chain A, Solution Structure Of The Central Core Domain Of Tfiie
Beta
gi|253722792|pdb|1D8K|A Chain A, Solution Structure Of The Central Core Domain Of Tfiie
Beta
Length = 81
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIK 32
+WL TEAL NNPKIEVI+G KY FKP + ++
Sbjct: 52 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVR 81
>gi|66807005|ref|XP_637225.1| transcription initiation factor IIE2 [Dictyostelium discoideum AX4]
gi|74853087|sp|Q54KJ8.1|T2EB_DICDI RecName: Full=General transcription factor IIE subunit 2; AltName:
Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|60465642|gb|EAL63721.1| transcription initiation factor IIE2 [Dictyostelium discoideum AX4]
Length = 276
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 7 EALQNNPKIEVIEGN-KYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 65
E L+NN KI + GN ++ FKP F ++ ++ +L LL + GGIL+ ++ ES + E
Sbjct: 108 ELLRNNEKI-IDHGNDRFSFKPKFNVRTQRDILDLLPNYP----GGILVSELAESYNNAE 162
Query: 66 KALK----NEIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSI 107
+K + I+ + A+ ++F ND+ ++ L + +W+SI
Sbjct: 163 SDVKKLKETKQIFAIKAAESACDIIFPNDERLRVPLSSELVDMWKSI 209
>gi|167517026|ref|XP_001742854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779478|gb|EDQ93092.1| predicted protein [Monosiga brevicollis MX1]
Length = 222
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL+ + ++EG + +K + + D GL + L++ G+GG+ LD++ +
Sbjct: 69 EALEQPNRSVIVEGQRISYKAPYDVHDLDGLRRELRKFWESGLGGMRLDEIASCYKGAKA 128
Query: 67 ALKN-----EIIYVTR---PADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+N E+ V R PA V+F+ + S +L +D + WR+I +
Sbjct: 129 DAQNLIARGEVYQVMRKQHPA--VPVLFHRESSLELPMDPELLSRWRTIPM 177
>gi|396081505|gb|AFN83121.1| transcription initiation factor TFIIE subunit beta [Encephalitozoon
romaleae SJ-2008]
Length = 270
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI----LLDDVR 58
++ ++++ NP+I V + +FKP++ I+ + L K++K+ + G G+ L+D
Sbjct: 104 YMLLQSIKKNPRI-VATHSTLMFKPLYSIRGVEDLRKVMKE--INGEEGLEMSKLMDSPV 160
Query: 59 ESLPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRS 118
P E+ +N+ I V D +++F+ND + +D + LW + RI +
Sbjct: 161 NITPFVEELKRNDEIIVLSDIDGSEIVFWNDMHEK-PIDPQIKSLWSQV-------RIST 212
Query: 119 FYG-VDYFSGAGEKAEKA 135
++ + + AG K EK
Sbjct: 213 YHDLIRELNTAGLKTEKV 230
>gi|255638616|gb|ACU19614.1| unknown [Glycine max]
Length = 246
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E L+ NPK+ +G ++ +K + +KD+ LL+L++++ +G+ I L D ++ +
Sbjct: 109 ENLRKNPKVNY-DGQRFSYKSKYGLKDKTELLQLIRKYP-EGLAVIDLKDAYPTVMEDLQ 166
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRSFY 120
ALK +I ++ + + + ND + +D+D ++L+RSI + ++ I +
Sbjct: 167 ALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKIF 222
>gi|356513413|ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
max]
Length = 279
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E L+ NPK+ +G ++ +K + +KD+ LL+L++++ +G+ I L D ++ +
Sbjct: 109 ENLRKNPKVNY-DGQRFSYKSKYGLKDKTELLQLIRKYP-EGLAVIDLKDAYPTVMEDLQ 166
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK +I ++ + + + ND + +D+D ++L+RSI +
Sbjct: 167 ALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIEL 211
>gi|217072652|gb|ACJ84686.1| unknown [Medicago truncatula]
Length = 217
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 8 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
+L+ NPK+E +G ++ +K + +K++ LL+L++++ G+ + D++++ P+ +
Sbjct: 114 SLRKNPKVEY-DGQRFSYKAKYGLKEKSELLQLIRRYP----EGLAVFDLKDAYPNVMED 168
Query: 68 LK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ +I ++ + + + ND A + +D+D ++L+RSI +
Sbjct: 169 LQALKAAGQIWLLSNFDSQDDITYPNDPKANIKVDDDLKQLFRSIEL 215
>gi|1834288|dbj|BAA19123.1| S.pombe TFA2 homolog [Schizosaccharomyces pombe]
Length = 224
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 9 LQNNPKIEVIEGNK-YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
L+ N +I E N+ + FKP+ I+ GLL L K G+ + ++R+ P+
Sbjct: 57 LKKNNRIYYDERNETFTFKPLHNIRSGAGLLAYLDSQ--KTHVGMSIKELRDGWPNVTVE 114
Query: 68 L-----KNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMI 113
L + E++ + TR K+++ NDKS +D++FQ++W I + +
Sbjct: 115 LEELEKQGEVLLLRTRKDGVPKMVWRNDKSCDCHVDKEFQQVWHEIPIPPTL 166
>gi|19074285|ref|NP_585791.1| TRANSCRIPTION INITIATION FACTOR TFIIE BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|449329456|gb|AGE95728.1| transcription initiation factor tfIIe beta subunit [Encephalitozoon
cuniculi]
Length = 247
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGG-------ILLDDVRE 59
++++ NP+I V + +FKP++ I+ + + K+++ G+GG L+D
Sbjct: 85 QSIKRNPRI-VATHSTLMFKPLYSIRSVEDMRKVVR-----GLGGEEGLEMSKLMDSPVN 138
Query: 60 SLPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRSF 119
+P E+ K+ I + D +V+F+ND + + +D + LW + RI ++
Sbjct: 139 VVPFVEELKKSNEIIILNDIDGSEVVFWND-TQESPVDPQIKSLWNQV-------RITTY 190
Query: 120 YG-VDYFSGAGEKAEKA 135
+ + + AG K EK
Sbjct: 191 HDLIRELNTAGLKTEKV 207
>gi|115390036|ref|XP_001212523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194919|gb|EAU36619.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 296
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E+
Sbjct: 130 EKVQYDPSGANGEGT-FAFRPPHNIRTAEQLLQKLQAQSTGA--GMSVRELREGWPNVEE 186
Query: 67 AL----KNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+ K + VTR D K+++ ND S DE+F+++W I V
Sbjct: 187 TINRLEKEGKLLVTRNKKDDHAKMVWANDPSLNQHFDEEFRQIWEKIKV 235
>gi|388499682|gb|AFK37907.1| unknown [Medicago truncatula]
Length = 282
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 8 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
+L+ NPK+E +G ++ +K + +K++ LL+L++++ G+ + D++++ P+ +
Sbjct: 114 SLRKNPKVEY-DGQRFSYKAKYGLKEKSELLQLIRRYP----EGLAVFDLKDAYPNVMED 168
Query: 68 LK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ +I ++ + + + ND A + +D+D ++L+RSI +
Sbjct: 169 LQALKAAGQIWLLSNFDSQDDITYPNDPKANIKVDDDLKQLFRSIEL 215
>gi|56377913|dbj|BAD74159.1| general transcription factor spTFIIE beta subunit
[Schizosaccharomyces pombe]
Length = 285
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 9 LQNNPKIEVIEGNK-YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
L+ N +I E N+ + FKP+ I+ GLL L K G+ + ++R+ P+
Sbjct: 118 LKKNNRIYYDERNETFTFKPLHNIRSGAGLLAYLDSQ--KTHVGMSIKELRDGWPNVTVE 175
Query: 68 L-----KNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMI 113
L + E++ + TR K+++ NDKS +D++FQ++W I + +
Sbjct: 176 LEELEKQGEVLLLRTRKDGVPKMVWRNDKSCDCHVDKEFQQVWHEIPIPPTL 227
>gi|392512692|emb|CAD25395.2| TRANSCRIPTION INITIATION FACTOR TFIIE BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
Length = 218
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGG-------ILLDDVRE 59
++++ NP+I V + +FKP++ I+ + + K+++ G+GG L+D
Sbjct: 56 QSIKRNPRI-VATHSTLMFKPLYSIRSVEDMRKVVR-----GLGGEEGLEMSKLMDSPVN 109
Query: 60 SLPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRSF 119
+P E+ K+ I + D +V+F+ND + + +D + LW + RI ++
Sbjct: 110 VVPFVEELKKSNEIIILNDIDGSEVVFWND-TQESPVDPQIKSLWNQV-------RITTY 161
Query: 120 YG-VDYFSGAGEKAEKA 135
+ + + AG K EK
Sbjct: 162 HDLIRELNTAGLKTEKV 178
>gi|19075379|ref|NP_587879.1| transcription factor TFIIE beta subunit, TFIIEB, Tfa2
[Schizosaccharomyces pombe 972h-]
gi|20140557|sp|P79011.2|T2EB_SCHPO RecName: Full=Transcription initiation factor IIE subunit beta;
Short=TFIIE-beta
gi|3451309|emb|CAA20446.1| transcription factor TFIIE beta subunit, TFIIEB, Tfa2
[Schizosaccharomyces pombe]
Length = 285
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 9 LQNNPKIEVIEGNK-YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
L+ N +I E N+ + FKP+ I+ GLL L K G+ + ++R+ P+
Sbjct: 118 LKKNNRIYYDERNETFTFKPLHNIRSGAGLLAYLDSQ--KTHVGMSIKELRDGWPNVTVE 175
Query: 68 L-----KNEIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMI 113
L + E++ + TR K+++ NDKS +D++FQ++W I + +
Sbjct: 176 LEELEKQGEVLLLRTRKDGVPKMVWRNDKSCDCHVDKEFQQVWHEIPIPPTL 227
>gi|449457584|ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
sativus]
gi|449499921|ref|XP_004160955.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
sativus]
Length = 277
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +KD+ LL L+++ +GI I L D S+ +
Sbjct: 112 DSLRNNPKVHY-DGRRFSYKSKHDLKDKNQLLYLVRKFP-EGIAVIDLKDAYPSVMEDLQ 169
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRI 116
ALK ++ ++ + + + ND Q+ +D+D ++L+R I + +L +
Sbjct: 170 ALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDV 221
>gi|281205063|gb|EFA79256.1| hypothetical protein PPL_07674 [Polysphondylium pallidum PN500]
Length = 202
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE- 65
++L+ N IE + + P +++K++ +L+LL + GILL+D++ S + E
Sbjct: 43 QSLKQNTFIEFLNDKTLRYIPQYQVKNQNDILELLSRQP----EGILLEDLKASYANAEN 98
Query: 66 ---KALKNEIIY-VTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
K +++ IY V K + ++YND+ ++ ++ +LW S+ V
Sbjct: 99 DVNKLKQSKSIYSVISSNSKSEKIYYNDEKYRVPCSDELVRLWGSVEV 146
>gi|401826580|ref|XP_003887383.1| transcription initiation factor IIE subunit beta [Encephalitozoon
hellem ATCC 50504]
gi|395459901|gb|AFM98402.1| transcription initiation factor IIE subunit beta [Encephalitozoon
hellem ATCC 50504]
Length = 218
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI----LLDDVR 58
++ ++++ NP+I V + +FKP++ I+ + L K++++ + G G+ L+D
Sbjct: 52 YMLLQSIKKNPRI-VATHSTLMFKPLYSIRGVEDLRKVMRE--INGEEGLEMSKLMDSPV 108
Query: 59 ESLPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRS 118
P E+ +N I V D +V+F+ND + +D + LW + RI +
Sbjct: 109 NIAPFVEELRRNGEIIVLNDIDGSEVVFWNDMHEK-PVDPQIKSLWSQV-------RIST 160
Query: 119 FYG-VDYFSGAGEKAEKA 135
++ + + AG K EK
Sbjct: 161 YHDLIRELNTAGLKIEKV 178
>gi|225426874|ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
vinifera]
gi|297742556|emb|CBI34705.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +KDR LL L+++ +GI I L D S+ +
Sbjct: 111 DSLRNNPKVSY-DGKRFAYKSKHDLKDRSQLLVLVRKFP-EGIAVIDLKDSYPSVMEDLQ 168
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRI 116
ALK ++ ++ + + + ND + +D+D ++ +R+I + +L I
Sbjct: 169 ALKAAGQVWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLDI 220
>gi|303389526|ref|XP_003072995.1| transcription initiation factor TFIIE subunit beta [Encephalitozoon
intestinalis ATCC 50506]
gi|303302139|gb|ADM11635.1| transcription initiation factor TFIIE subunit beta [Encephalitozoon
intestinalis ATCC 50506]
Length = 216
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGI----LLDDVR 58
++ ++++ NP+I V N +FKP++ I+ + + +++K+ L G G+ L+D
Sbjct: 50 YMLLQSIKKNPRI-VSTHNTLMFKPLYSIRSVEDMREVMKK--LNGEEGLEMSKLMDSPV 106
Query: 59 ESLPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRS 118
P ++ KN I V D +V+F+ND + + + LW + RI +
Sbjct: 107 NIAPFVDELKKNNEIIVLSDLDGSEVVFWNDMQEN-PVAPEIKDLWSQV-------RIST 158
Query: 119 FYG-VDYFSGAGEKAEKA 135
++ + + AG K EK
Sbjct: 159 YHDLIRELNTAGLKTEKV 176
>gi|225714664|gb|ACO13178.1| Transcription initiation factor IIE subunit beta [Lepeophtheirus
salmonis]
Length = 162
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 WLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGL 37
WL TEAL+NNPKIE G YIFK + + +K
Sbjct: 128 WLFTEALKNNPKIEAKNGT-YIFKAPYNVTSKKNF 161
>gi|356528032|ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
max]
Length = 280
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E L+ NPK+ +G + +K + IKD+ LL+L++++ +G+ I L D ++ +
Sbjct: 110 ENLRKNPKVNY-DGQRLSYKSKYGIKDKTELLQLVRKYP-EGLAVIDLKDAYPTVMEDLQ 167
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
A+K +I ++ + + + ND + +D+D + L+RSI +
Sbjct: 168 AMKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIEL 212
>gi|156042207|ref|XP_001587661.1| hypothetical protein SS1G_11654 [Sclerotinia sclerotiorum 1980]
gi|154696037|gb|EDN95775.1| hypothetical protein SS1G_11654 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 297
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 1 MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES 60
++W++ L K + + + +P+ ++++ LL L+ + G+ + D+++
Sbjct: 126 VQWIADPKL----KTQTWDSGTFKHRPIIGVRNKGALLSYLQ--NKPDAQGVSVKDLKDG 179
Query: 61 LPHCEKALKNEI-----IYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSI---SVD 110
P CE+A+ NE+ I VTR + ++++ ND S ++ +FQ +W SVD
Sbjct: 180 WPDCEEAI-NELEAEHKILVTRTKKDNHARMVWINDPSLIHPVESEFQVMWHRTELPSVD 238
Query: 111 GMILRI 116
++ ++
Sbjct: 239 DLVRKL 244
>gi|119472950|ref|XP_001258451.1| transcription initiation factor TFIIE, beta subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119406603|gb|EAW16554.1| transcription initiation factor TFIIE, beta subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 290
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I+ + LL+ L+ G+ + ++RE P+ E+ + K + VTR
Sbjct: 139 FAFRPPHNIRTAEQLLQKLQSQTT--AAGMSVRELREGWPNVEETINRLEKEGKLLVTRN 196
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
D K+++ ND S DE+F+++W I V
Sbjct: 197 KKDDHAKMVWANDPSLVQHFDEEFRQIWAKIKV 229
>gi|70992683|ref|XP_751190.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
fumigatus Af293]
gi|66848823|gb|EAL89152.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus fumigatus Af293]
gi|159130355|gb|EDP55468.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus fumigatus A1163]
Length = 290
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I+ + LL+ L+ G+ + ++RE P+ E+ + K + VTR
Sbjct: 139 FAFRPPHNIRTAEQLLQKLQSQTT--AAGMSVRELREGWPNVEETINRLEKEGKLLVTRN 196
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
D K+++ ND S DE+F+++W I V
Sbjct: 197 KKDDHAKMVWANDPSLVQHFDEEFRQIWAKIKV 229
>gi|121700200|ref|XP_001268365.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396507|gb|EAW06939.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 294
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I+ + LL+ L+ G+ + ++RE P+ E + K + VTR
Sbjct: 143 FAFRPPHNIRTAEQLLQKLQAQST--AAGMSVRELREGWPNVEDTINRLEKEGKLLVTRN 200
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
D K+++ ND S DE+F+++W I +
Sbjct: 201 KKDDHAKMVWANDPSLVQHFDEEFRQIWEKIKI 233
>gi|213401367|ref|XP_002171456.1| transcription initiation factor IIE subunit beta
[Schizosaccharomyces japonicus yFS275]
gi|211999503|gb|EEB05163.1| transcription initiation factor IIE subunit beta
[Schizosaccharomyces japonicus yFS275]
Length = 285
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL-----KNEIIYVTR 77
+ FKP+ I+ GLL L LK G+ + ++++ P+ L + E++ +
Sbjct: 132 FTFKPLHNIRSSAGLLAYLD--SLKVHAGMSVKELKDGWPNVAAELEELEKRGEVLLLRT 189
Query: 78 PADK-RKVMFYNDKSAQLDLDEDFQKLWRSISVDGMI 113
D K+++ ND+S +D++F+ +W I + +
Sbjct: 190 KKDAVPKMVWRNDRSCDCHVDDEFKSVWHEIPIPPTL 226
>gi|378731197|gb|EHY57656.1| transcription initiation factor TFIIE beta subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 232
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 9 LQNNPKIEV-IEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
L NPK+ + Y FKP + I LLK L+ GI + D+++ P E+
Sbjct: 63 LNVNPKVNYDAAADTYKFKPTYNIASADDLLKYLQNQG--SALGISVRDLKDGWPDVEET 120
Query: 68 L-----KNEIIYVTRPADKRKVMFY-NDKSAQLDLDEDFQKLWRSISVDGMILRIRSFYG 121
+ +++++ V D M + +D + LD++F+ +W I + + I+
Sbjct: 121 IDRLEAQHKLLVVRNKKDHHPRMVWLDDPTLVAPLDQEFKDIWLQIPLPSVEDTIKELRR 180
Query: 122 VDYFSGAGEKAEKAT 136
+++ S GE A T
Sbjct: 181 MNHKS-TGEPARPDT 194
>gi|224058567|ref|XP_002299546.1| predicted protein [Populus trichocarpa]
gi|222846804|gb|EEE84351.1| predicted protein [Populus trichocarpa]
Length = 284
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +KD+ LL L+++ +GI I L D S+ +
Sbjct: 115 DSLRNNPKVHY-DGKRFSYKSKHDLKDKSQLLVLIRKFP-EGIAVIDLKDSYPSVMDDLQ 172
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRI 116
ALK +I ++ + + + ND + +D+D ++L+R I + +L I
Sbjct: 173 ALKAVGQIWLLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLDI 224
>gi|358060329|dbj|GAA93734.1| hypothetical protein E5Q_00380 [Mixia osmundae IAM 14324]
Length = 246
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E ++ +P+ ++ Y ++P+ +I L +++K KG GI + ++ES P E+
Sbjct: 72 ERVEYDPRTDL-----YSWRPLHRITTTADLYRIVKTEGEKG--GIKVSLLKESCPTVEQ 124
Query: 67 ALK----NEIIYVTRPADKR-------KVMFYNDKSAQLDLDEDFQKLWRSISVDG 111
++ + I VTR K +++F ++ ++ +D DF+KLW I G
Sbjct: 125 HIRTLEQDGKIIVTRGESKEFGKEGPMRMVFPDEIGQKILIDPDFRKLWEEIKTPG 180
>gi|398396722|ref|XP_003851819.1| hypothetical protein MYCGRDRAFT_93943 [Zymoseptoria tritici IPO323]
gi|339471699|gb|EGP86795.1| hypothetical protein MYCGRDRAFT_93943 [Zymoseptoria tritici IPO323]
Length = 245
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 7 EALQNNPKIEVIE---GNKYIFKPVFKIKDRKGLLK-LLKQHDLKGIGGILLDDVRESLP 62
+AL +P++E + G + FKPV + LL+ L +Q D K + + D++ P
Sbjct: 78 KALSAHPRVESKDDKDGIVFQFKPVIPATNADDLLEYLARQQDSKQV---TVADLQVGWP 134
Query: 63 HC----EKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRS 118
C + + I V R K + ++ + + +D+DF+ LW I V I IR
Sbjct: 135 DCVPEVNRLERAHHILVRRVKGKARAVWLDSPDLHMQVDDDFRDLWSGIKVPEDIEEIRK 194
Query: 119 FYGVDYFSGAGEKAE 133
EK E
Sbjct: 195 DLKTTNMMVTSEKKE 209
>gi|356497222|ref|XP_003517461.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Glycine max]
Length = 257
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E+++ NPK++ +G ++ +K ++D+ LL L++ K GI + D+++S P+ +
Sbjct: 89 ESMRKNPKVKY-DGERFSYKSKHAVRDKNQLLFLVR----KFPEGIAVVDLKDSYPNVME 143
Query: 67 ALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ EI ++ + + + ND + +D+D ++L+R I +
Sbjct: 144 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIEL 191
>gi|429966187|gb|ELA48184.1| hypothetical protein VCUG_00422 [Vavraia culicis 'floridensis']
Length = 220
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 ALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLK-GIG-GILLDDVRESLPHCE 65
L NPKI VI N +FKP++ I++ K L ++ + + GI LLD + P +
Sbjct: 61 TLTKNPKI-VIGDNTLLFKPLYNIRNEKDLENIMVATNCEYGIELEKLLDSPIDIKPFVQ 119
Query: 66 KALKNEIIYVTRPADKRKVMFYN 88
K +I+V + D +++FYN
Sbjct: 120 NLQKKAVIFVLKDIDNSEIVFYN 142
>gi|388501696|gb|AFK38914.1| unknown [Lotus japonicus]
Length = 278
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++++ NPK++ +G K+ +K ++D+K LL L+++ +GI I L D ++ +
Sbjct: 108 DSMRKNPKVK-FDGEKFSYKSKHDLRDKKELLFLIRKFP-EGIAVIDLKDSYPTVLEDLQ 165
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK EI ++ + + + ND + +D+D ++L+R I +
Sbjct: 166 ALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIEL 210
>gi|302791872|ref|XP_002977702.1| hypothetical protein SELMODRAFT_107428 [Selaginella moellendorffii]
gi|302795614|ref|XP_002979570.1| hypothetical protein SELMODRAFT_419190 [Selaginella moellendorffii]
gi|300152818|gb|EFJ19459.1| hypothetical protein SELMODRAFT_419190 [Selaginella moellendorffii]
gi|300154405|gb|EFJ21040.1| hypothetical protein SELMODRAFT_107428 [Selaginella moellendorffii]
Length = 300
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHC-- 64
E L+NN K+ +G ++ +K +K++ LL L+ K G+ L ++R++ P
Sbjct: 127 ETLKNNVKVS-FDGQRFSYKAKHGLKNKAELLVQLR----KCTEGMALSELRDAYPGIVS 181
Query: 65 ---EKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
E EI + + ++++ +D ++ +DED KL RSI +
Sbjct: 182 DVQELKASGEIRVMCNSDSQEEILYPDDPRMKIKVDEDIAKLCRSIEL 229
>gi|449017337|dbj|BAM80739.1| similar to transcription initiation factor TFIIE beta subunit
[Cyanidioschyzon merolae strain 10D]
Length = 259
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 9 LQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL 68
L NP++ + ++ ++ + +++R LL LLK + GI + ++++S + +
Sbjct: 74 LVGNPRVLLESDGRWRWRSKYYLRNRDDLLNLLK----TSVEGIPVSELQDSYRDALRDI 129
Query: 69 KN-------EIIYVTRPADKRK--VMFYNDKSAQLDLDEDFQKLWRSISV 109
+ +I RP++ K ++F ND + + + E +KLW+SI +
Sbjct: 130 RELAYERNPPLILAFRPSEHTKEVILFPNDPTLYVRISEQVRKLWQSIPI 179
>gi|242042027|ref|XP_002468408.1| hypothetical protein SORBIDRAFT_01g045430 [Sorghum bicolor]
gi|241922262|gb|EER95406.1| hypothetical protein SORBIDRAFT_01g045430 [Sorghum bicolor]
Length = 300
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPH--- 63
++L+NNPK+ + +G ++ +KP + R LL L+K+ + G+ ++D++++ P
Sbjct: 115 DSLRNNPKV-LFDGTRFSYKPKHILTGRDELLGLIKEKEC----GLPVEDIKDAYPSVLE 169
Query: 64 -CEKALKNEIIYVTRPADKRK----------------VMFYNDKSAQLDLDEDFQKLW 104
C +L +IY A+ K + ++ND + +D D ++L+
Sbjct: 170 DCRFSLIWAVIYSIANAEALKASGDVWWLSSTQSQEDMAYFNDPRYNITVDNDLKELF 227
>gi|357113796|ref|XP_003558687.1| PREDICTED: transcription initiation factor IIE subunit beta-like
[Brachypodium distachyon]
Length = 284
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK++ +G ++ +K + + LL L++ + +G+ + + D S+ +
Sbjct: 115 DSLRNNPKVQ-FDGKRFSYKSKHDLNGKDQLLSLIRDYP-EGLPVVEVKDAYPSVLEDLQ 172
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRI 116
ALK +I +++ + + + ND +++ LD D + L+R I + +L I
Sbjct: 173 ALKASGDIWWLSSMDSQEDIAYPNDPKSKIKLDADLKDLYRGIELPRDMLDI 224
>gi|242074266|ref|XP_002447069.1| hypothetical protein SORBIDRAFT_06g028040 [Sorghum bicolor]
gi|241938252|gb|EES11397.1| hypothetical protein SORBIDRAFT_06g028040 [Sorghum bicolor]
Length = 279
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +K + LL L++ K G+ + +V+++ P+ +
Sbjct: 110 DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVLIR----KFPEGLAVVEVKDAYPNVLE 164
Query: 67 ALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ E+ ++ + +++ ND A++ +D+D ++L+R I +
Sbjct: 165 DLQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDLKQLFREIEL 212
>gi|115481880|ref|NP_001064533.1| Os10g0397200 [Oryza sativa Japonica Group]
gi|19881736|gb|AAM01137.1|AC108884_19 Putative Transcription initiation factor IIE, beta subunit [Oryza
sativa Japonica Group]
gi|31431902|gb|AAP53614.1| Transcription initiation factor IIE beta subunit, putative,
expressed [Oryza sativa Japonica Group]
gi|78708547|gb|ABB47522.1| Transcription initiation factor IIE beta subunit, putative,
expressed [Oryza sativa Japonica Group]
gi|113639142|dbj|BAF26447.1| Os10g0397200 [Oryza sativa Japonica Group]
gi|125574698|gb|EAZ15982.1| hypothetical protein OsJ_31427 [Oryza sativa Japonica Group]
Length = 279
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +K + LL L++++ +G+ + + D ++ +
Sbjct: 110 DSLRNNPKVHY-DGRRFSYKSKHDLKGKDQLLVLVRKYP-EGLAVVEVKDAYPTVMEDLQ 167
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK E+ ++ + +++ ND A++ +D+D ++L+R + +
Sbjct: 168 ALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDLKQLFREMEL 212
>gi|346974437|gb|EGY17889.1| transcription initiation factor IIE subunit beta [Verticillium
dahliae VdLs.17]
Length = 277
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 31 IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL-----KNEIIYVTRPADKRKV- 84
IKD+ GLL L+ + +L +++E P C+ AL +N+II V DK+ +
Sbjct: 136 IKDKVGLLGHLQAKS--SMEPLLYKELKEGWPQCDAALAELKRENKIITV---EDKKTIK 190
Query: 85 -MFYNDKSAQLDLDEDFQKLWRSISV 109
+F +D + + +++DF+ +W+ + V
Sbjct: 191 HIFIDDPTLRHTVEDDFKNMWKRVVV 216
>gi|67538656|ref|XP_663102.1| hypothetical protein AN5498.2 [Aspergillus nidulans FGSC A4]
gi|40743468|gb|EAA62658.1| hypothetical protein AN5498.2 [Aspergillus nidulans FGSC A4]
gi|259485052|tpe|CBF81795.1| TPA: transcription initiation factor TFIIE, beta subunit, putative
(AFU_orthologue; AFUA_6G13130) [Aspergillus nidulans
FGSC A4]
Length = 293
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E +Q +P EG + F+P I+ + LL+ L Q G+G + + ++RE P+ E
Sbjct: 127 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKL-QSQSTGVG-MSVRELREGWPNVED 183
Query: 67 AL----KNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+ K + VTR D K+++ ND S D++F+++W I +
Sbjct: 184 TINKLEKEGKLLVTRNKKDDHAKMVWANDPSLIQHFDDEFKQIWEKIKI 232
>gi|359807359|ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
gi|255639642|gb|ACU20115.1| unknown [Glycine max]
Length = 257
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E+++ NPK++ +G ++ +K ++D+ LL L++ K GI + D+++S P +
Sbjct: 89 ESMRKNPKVKY-DGERFSYKSKHDVRDKNQLLFLVR----KFPEGIAVVDLKDSYPTVME 143
Query: 67 ALK-----NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ EI ++ + + + ND + +D+D ++L+R I +
Sbjct: 144 DLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIEL 191
>gi|340517094|gb|EGR47340.1| predicted protein [Trichoderma reesei QM6a]
Length = 300
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 6 TEALQNNPKIE----------VIEGNKYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILL 54
TE L+ +P++E + Y +P+ +KD LL L++ G+ +
Sbjct: 119 TEGLRRHPRVEWRPDPSLSEQTWKTGTYKHRPIIPGVKDATSLLAHLQRK--TDASGVSV 176
Query: 55 DDVRESLPHCEKAL-----KNEIIYVTRPADK-RKVMFYNDKSAQLDLDEDFQKLWRSIS 108
D+++ P CE+ L +++++ V D + ++ +D S ++ +FQ +WR +
Sbjct: 177 KDLKDGWPDCEETLAKLEREHKVLVVRTKKDNFPRYVWADDPSLHHKVEPEFQAMWRRVQ 236
Query: 109 VDGM 112
+ +
Sbjct: 237 LPSL 240
>gi|125531807|gb|EAY78372.1| hypothetical protein OsI_33458 [Oryza sativa Indica Group]
Length = 279
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +K + LL L++++ +G+ + + D ++ +
Sbjct: 110 DSLRNNPKVHY-DGRRFSYKSKHDLKGKDQLLVLVRKYP-EGLAVVEVKDAYPTVMEDLQ 167
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK E+ ++ + +++ ND A++ +D+D ++L+R + +
Sbjct: 168 ALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDLKQLFREMEL 212
>gi|440493391|gb|ELQ75868.1| Transcription initiation factor IIE, beta subunit
[Trachipleistophora hominis]
Length = 220
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLK-GIG-GILLDDVRESLPHC 64
+ L NPKI VI N +FKP++ I+ K L ++ + + GI LLD + P
Sbjct: 60 KTLTKNPKI-VIGNNTLLFKPLYNIRSEKDLEDIMIATNAEYGIELEKLLDSPIDIKPFV 118
Query: 65 EKALKNEIIYVTRPADKRKVMFYN 88
+ E+I+V + D +++FYN
Sbjct: 119 SNLKRKEVIFVLKDIDNSEIVFYN 142
>gi|302407962|ref|XP_003001816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359537|gb|EEY21965.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 277
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 31 IKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL-----KNEIIYVTRPADKRKV- 84
IKD+ GLL L+ + +L +++E P C+ AL +N+II V DK+ +
Sbjct: 136 IKDKIGLLGHLQAKS--SMEPLLYKELKEGWPQCDAALAELKRENKIITV---EDKKTIK 190
Query: 85 -MFYNDKSAQLDLDEDFQKLWRSISV 109
+F +D + + +++DF+ +W+ + V
Sbjct: 191 HIFIDDPTLRHTVEDDFKNMWKRVVV 216
>gi|212723734|ref|NP_001131460.1| uncharacterized protein LOC100192795 [Zea mays]
gi|194691592|gb|ACF79880.1| unknown [Zea mays]
gi|414585524|tpg|DAA36095.1| TPA: hypothetical protein ZEAMMB73_089157 [Zea mays]
Length = 279
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +K + LL L+++ +G+ + + D ++ +
Sbjct: 110 DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVLIRKFP-EGLAVVEVKDAYSNVLEDLQ 167
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK E+ ++ + +++ ND A++ +D+D ++L+R I +
Sbjct: 168 ALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDLKQLFREIEL 212
>gi|255947014|ref|XP_002564274.1| Pc22g02300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591291|emb|CAP97518.1| Pc22g02300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 295
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I++ + LLK L+ G+ + ++RE P+ E+ + K + VTR
Sbjct: 142 FRFRPPHNIRNSEQLLKYLQAQTT--AAGMSVRELREGWPNVEEEINRMEKEGKLLVTRN 199
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
D K+++ ND S D++F+++W I V
Sbjct: 200 KKDDHPKMVWPNDPSLIEHFDDEFKQIWDKIKV 232
>gi|320590910|gb|EFX03351.1| transcription initiation factor beta [Grosmannia clavigera kw1407]
Length = 318
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 23 YIFKPVF-KIKDRKGLLKLLKQH-DLKGIGGILLDDVRESLPHCEKAL-----KNEIIYV 75
Y PV +KDR LL+ L++ D +G+ + D+++ P CE L ++ I+ V
Sbjct: 164 YEHLPVIPNVKDRTSLLQHLQRRTDAQGVN---VKDLKDGWPDCEATLTALEKEHRILVV 220
Query: 76 -TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
T+ + ++++ +D S +++ DFQ LW V +
Sbjct: 221 RTKKDNHPRMVWLDDPSLCHEVEPDFQALWHRAEVPSI 258
>gi|414585525|tpg|DAA36096.1| TPA: hypothetical protein ZEAMMB73_089157 [Zea mays]
Length = 292
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+NNPK+ +G ++ +K +K + LL L+++ +G+ + + D ++ +
Sbjct: 123 DSLRNNPKVSY-DGRRFSYKSKHDLKGKDQLLVLIRKFP-EGLAVVEVKDAYSNVLEDLQ 180
Query: 67 ALK--NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
ALK E+ ++ + +++ ND A++ +D+D ++L+R I +
Sbjct: 181 ALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDLKQLFREIEL 225
>gi|145240985|ref|XP_001393139.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
niger CBS 513.88]
gi|134077667|emb|CAK96780.1| unnamed protein product [Aspergillus niger]
gi|350630111|gb|EHA18484.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
niger ATCC 1015]
Length = 292
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E
Sbjct: 126 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKLQSQSTGA--GMSVRELREGWPNVED 182
Query: 67 AL----KNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+ K + VTR D K+++ ND S D +F+++W I V
Sbjct: 183 TINKLEKEGKLLVTRNKKDDHAKMVWANDPSLIQHFDPEFRQIWEKIKV 231
>gi|358371312|dbj|GAA87920.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
kawachii IFO 4308]
Length = 294
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
E +Q +P EG + F+P I+ + LL+ L+ G+ + ++RE P+ E
Sbjct: 128 EKVQYDPSGANGEGT-FSFRPPHNIRTAEQLLQKLQSQSTGA--GMSVRELREGWPNVED 184
Query: 67 AL----KNEIIYVTRPA--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+ K + VTR D K+++ ND S D +F+++W I V
Sbjct: 185 TINKLEKEGKLLVTRNKKDDHAKMVWANDPSLIQHFDPEFRQIWEKIKV 233
>gi|169770299|ref|XP_001819619.1| transcription initiation factor TFIIE, beta subunit [Aspergillus
oryzae RIB40]
gi|238487304|ref|XP_002374890.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus flavus NRRL3357]
gi|83767478|dbj|BAE57617.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699769|gb|EED56108.1| transcription initiation factor TFIIE, beta subunit, putative
[Aspergillus flavus NRRL3357]
gi|391867465|gb|EIT76711.1| transcription initiation factor IIE, beta subunit [Aspergillus
oryzae 3.042]
Length = 291
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I+ + LL+ L+ G+ + ++RE P+ E + K + VTR
Sbjct: 140 FSFRPPHNIRTAEQLLQKLQSQST--AAGMSVRELREGWPNVEDTINQLEKEGKLLVTRN 197
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
D K+++ ND S D++F+++W I V
Sbjct: 198 KKDDHAKMVWANDPSLIQHFDDEFRQIWEKIRV 230
>gi|358386276|gb|EHK23872.1| hypothetical protein TRIVIDRAFT_58003 [Trichoderma virens Gv29-8]
Length = 298
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 6 TEALQNNPKIE----------VIEGNKYIFKPVFK-IKDRKGLLKLLKQHDLKGIGGILL 54
TE L+ +P++E + Y +P+ +KD LL L++ G+ +
Sbjct: 117 TEGLRGHPRVEWRPDPSLSEQTWKTGTYKHRPIIPGVKDATSLLAHLQRK--TDSSGVSV 174
Query: 55 DDVRESLPHCEKAL-----KNEIIYVTRPADK-RKVMFYNDKSAQLDLDEDFQKLWRSIS 108
D+++ P CE L +++I+ V D + ++ +D S ++ +FQ +WR +
Sbjct: 175 KDLKDGWPDCEDTLAKLEHEHKILVVRTKKDNFPRYVWADDASLHNSVEPEFQAMWRRVQ 234
Query: 109 VDGM 112
+ +
Sbjct: 235 LPSL 238
>gi|242789623|ref|XP_002481401.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717989|gb|EED17409.1| transcription initiation factor TFIIE, beta subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 283
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 23 YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKAL----KNEIIYVTRP 78
+ F+P I+ + LL+ L+ + GIL+ D++E P E+ + ++ + VTR
Sbjct: 132 FSFRPPHNIRSEEQLLQKLQSQTT--MTGILVKDLKEGWPGVEQIIDKLERDGKLLVTRN 189
Query: 79 A--DKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
+ K+++ ND S D++F+++W +
Sbjct: 190 KKDNHPKMVWANDPSLMHKFDDEFRQIWEKTKI 222
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,166,227,079
Number of Sequences: 23463169
Number of extensions: 81836008
Number of successful extensions: 239060
Number of sequences better than 100.0: 220
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 238628
Number of HSP's gapped (non-prelim): 221
length of query: 136
length of database: 8,064,228,071
effective HSP length: 101
effective length of query: 35
effective length of database: 9,989,415,298
effective search space: 349629535430
effective search space used: 349629535430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)