Your job contains 1 sequence.
>psy14241
MKWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRES
LPHCEKALKNEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRIRSFY
GVDYFSGAGEKAEKAT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14241
(136 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015829 - symbol:TfIIEbeta "Transcription factor I... 405 8.9e-38 1
UNIPROTKB|P29084 - symbol:GTF2E2 "Transcription initiatio... 369 5.8e-34 1
UNIPROTKB|E2R5J2 - symbol:GTF2E2 "Uncharacterized protein... 368 7.4e-34 1
UNIPROTKB|F1MUX7 - symbol:GTF2E2 "General transcription f... 365 1.5e-33 1
UNIPROTKB|Q2KJF9 - symbol:GTF2E2 "General transcription f... 365 1.5e-33 1
MGI|MGI:1915403 - symbol:Gtf2e2 "general transcription fa... 365 1.5e-33 1
RGD|1310134 - symbol:Gtf2e2 "general transcription factor... 365 1.5e-33 1
UNIPROTKB|F1RX65 - symbol:GTF2E2 "Uncharacterized protein... 355 1.8e-32 1
ZFIN|ZDB-GENE-030131-6794 - symbol:gtf2e2 "general transc... 346 1.6e-31 1
UNIPROTKB|Q5ZIE1 - symbol:GTF2E2 "Uncharacterized protein... 333 3.8e-30 1
UNIPROTKB|E5RH41 - symbol:GTF2E2 "Transcription initiatio... 251 1.9e-21 1
WB|WBGene00010054 - symbol:F54D5.11.2 species:6239 "Caeno... 202 2.9e-16 1
UNIPROTKB|G5EG47 - symbol:TFIIE-beta "TFIIE-beta protein"... 202 2.9e-16 1
DICTYBASE|DDB_G0287307 - symbol:gtf2e2 "transcription ini... 124 1.7e-07 1
TAIR|locus:2128580 - symbol:AT4G20330 species:3702 "Arabi... 109 8.6e-06 1
POMBASE|SPCC1672.08c - symbol:tfa2 "transcription factor ... 107 1.4e-05 1
TAIR|locus:2133139 - symbol:AT4G21010 species:3702 "Arabi... 104 2.8e-05 1
>FB|FBgn0015829 [details] [associations]
symbol:TfIIEbeta "Transcription factor IIEbeta" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=ISS;IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
EMBL:AE014296 GO:GO:0022008 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 eggNOG:NOG284684
KO:K03137 HSSP:P29084 OMA:LGDQIIF GeneTree:ENSGT00390000011749
UniGene:Dm.2665 GeneID:38527 KEGG:dme:Dmel_CG1276 CTD:38527
FlyBase:FBgn0015829 GenomeRNAi:38527 NextBio:809104 EMBL:U72893
EMBL:BT022197 RefSeq:NP_523923.1 SMR:O96881 IntAct:O96881
MINT:MINT-928529 STRING:O96881 EnsemblMetazoa:FBtr0073234
UCSC:CG1276-RA HOGENOM:HOG000248128 InParanoid:O96881
OrthoDB:EOG45MKN7 Uniprot:O96881
Length = 292
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 74/114 (64%), Positives = 94/114 (82%)
Query: 3 WLSTEALQNNPKIEVIE-GNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
WL++EAL NNPK+E G K+ FKPV+KIKD K L++LLKQHDLKG+GGILLDDV+ESL
Sbjct: 111 WLASEALHNNPKVEASPCGTKFSFKPVYKIKDGKTLMRLLKQHDLKGLGGILLDDVQESL 170
Query: 62 PHCEKALKN---EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
PHCEK LKN EI++V RP DK+K++FYND++A +D++FQKLWRS +VD M
Sbjct: 171 PHCEKVLKNRSAEILFVVRPIDKKKILFYNDRTANFSVDDEFQKLWRSATVDAM 224
>UNIPROTKB|P29084 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0005654 GO:GO:0016032
GO:GO:0006355 EMBL:CH471080 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006368 GO:GO:0006367 Reactome:REACT_1788
GO:GO:0005673 CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 EMBL:S67861 EMBL:X63469 EMBL:AF292062
EMBL:AF292056 EMBL:AF292057 EMBL:AF292058 EMBL:AF292059
EMBL:AF292060 EMBL:AF292061 EMBL:BC030572 IPI:IPI00019981
PIR:S29292 RefSeq:NP_002086.1 UniGene:Hs.77100 PDB:1D8J PDB:1D8K
PDBsum:1D8J PDBsum:1D8K ProteinModelPortal:P29084 SMR:P29084
DIP:DIP-716N IntAct:P29084 MINT:MINT-1894071 STRING:P29084
PhosphoSite:P29084 DMDM:135232 PaxDb:P29084 PeptideAtlas:P29084
PRIDE:P29084 DNASU:2961 Ensembl:ENST00000355904 GeneID:2961
KEGG:hsa:2961 UCSC:uc003xig.3 GeneCards:GC08M030429 HGNC:HGNC:4651
HPA:CAB009603 HPA:HPA025065 MIM:189964 neXtProt:NX_P29084
PharmGKB:PA29037 eggNOG:COG5174 InParanoid:P29084 OMA:LGDQIIF
PhylomeDB:P29084 EvolutionaryTrace:P29084 GenomeRNAi:2961
NextBio:11738 ArrayExpress:P29084 Bgee:P29084 CleanEx:HS_GTF2E2
Genevestigator:P29084 GermOnline:ENSG00000197265 Uniprot:P29084
Length = 291
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 67/114 (58%), Positives = 94/114 (82%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>UNIPROTKB|E2R5J2 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:AAEX03010423
RefSeq:XP_003639611.1 ProteinModelPortal:E2R5J2
Ensembl:ENSCAFT00000010484 GeneID:100855770 KEGG:cfa:100855770
NextBio:20851406 Uniprot:E2R5J2
Length = 291
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 68/114 (59%), Positives = 93/114 (81%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++II+V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQIIFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>UNIPROTKB|F1MUX7 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
IPI:IPI00694434 UniGene:Bt.20425 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:DAAA02060454 EMBL:DAAA02060453
Ensembl:ENSBTAT00000016863 Uniprot:F1MUX7
Length = 289
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 66/114 (57%), Positives = 93/114 (81%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>UNIPROTKB|Q2KJF9 [details] [associations]
symbol:GTF2E2 "General transcription factor IIE subunit 2"
species:9913 "Bos taurus" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006367 GO:GO:0005673 EMBL:BC105362 IPI:IPI00694434
RefSeq:NP_001039530.1 UniGene:Bt.20425 ProteinModelPortal:Q2KJF9
SMR:Q2KJF9 STRING:Q2KJF9 PRIDE:Q2KJF9 GeneID:510921 KEGG:bta:510921
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
InParanoid:Q2KJF9 KO:K03137 OrthoDB:EOG470TJ9 NextBio:20869682
Uniprot:Q2KJF9
Length = 289
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 66/114 (57%), Positives = 93/114 (81%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL NNPKIEV++G KY FKP + +KD+K LL+LL QHD +G+GGILL+D+ E L
Sbjct: 115 QWLMSEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDQHDQRGLGGILLEDIEEGL 173
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 174 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 226
>MGI|MGI:1915403 [details] [associations]
symbol:Gtf2e2 "general transcription factor II E,
polypeptide 2 (beta subunit)" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
MGI:MGI:1915403 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400
KO:K03137 OrthoDB:EOG470TJ9 OMA:LGDQIIF EMBL:AK007492 EMBL:AK088342
EMBL:AK150415 EMBL:AK153370 EMBL:AK158783 EMBL:BC020016
IPI:IPI00331112 RefSeq:NP_001161393.1 RefSeq:NP_001161394.1
RefSeq:NP_080860.3 UniGene:Mm.286104 UniGene:Mm.490339
ProteinModelPortal:Q9D902 SMR:Q9D902 DIP:DIP-49546N IntAct:Q9D902
MINT:MINT-218577 STRING:Q9D902 PhosphoSite:Q9D902 PaxDb:Q9D902
PRIDE:Q9D902 Ensembl:ENSMUST00000167264 Ensembl:ENSMUST00000170705
Ensembl:ENSMUST00000171010 GeneID:68153 KEGG:mmu:68153
GeneTree:ENSGT00390000011749 InParanoid:Q9D902 NextBio:326546
Bgee:Q9D902 Genevestigator:Q9D902 GermOnline:ENSMUSG00000031585
Uniprot:Q9D902
Length = 292
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 66/114 (57%), Positives = 93/114 (81%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 118 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 176
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 177 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 229
>RGD|1310134 [details] [associations]
symbol:Gtf2e2 "general transcription factor IIE, polypeptide 2,
beta" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 RGD:1310134 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 IPI:IPI00205391
Ensembl:ENSRNOT00000019989 UCSC:RGD:1310134 ArrayExpress:D4A5U4
Uniprot:D4A5U4
Length = 279
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 66/114 (57%), Positives = 93/114 (81%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEV++G KY FKP + +KD+K LL+LL HD +G+GGILL+D+ E L
Sbjct: 117 QWLMTEALVNNPKIEVVDG-KYAFKPKYNLKDKKALLRLLDNHDQRGLGGILLEDIEEGL 175
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ +KA+K ++I++V+RP DK+K++F+NDKS Q +DE+FQKLWRS++VD M
Sbjct: 176 PNSQKAVKALGDQILFVSRP-DKKKILFFNDKSCQFSVDEEFQKLWRSVTVDSM 228
>UNIPROTKB|F1RX65 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
GO:GO:0005673 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:FP236445 EMBL:CU855604 EMBL:FP236189
Ensembl:ENSSSCT00000017253 Uniprot:F1RX65
Length = 209
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 67/116 (57%), Positives = 93/116 (80%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + +KD+K LL+LL +HD +G+GGILL+D+ E L
Sbjct: 33 QWLMTEALVNNPKIEVIDG-KYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGL 91
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDE--DFQKLWRSISVDGM 112
P+ +KA+K ++I++V RP DK+K++F+NDKS Q +DE +FQKLWRS++VD M
Sbjct: 92 PNSQKAVKALGDQILFVNRP-DKKKILFFNDKSCQFSVDEGTEFQKLWRSVTVDSM 146
>ZFIN|ZDB-GENE-030131-6794 [details] [associations]
symbol:gtf2e2 "general transcription factor IIE,
polypeptide 2, beta" species:7955 "Danio rerio" [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 ZFIN:ZDB-GENE-030131-6794
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673
CTD:2961 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OMA:LGDQIIF GeneTree:ENSGT00390000011749 EMBL:BX469934
EMBL:BX908795 EMBL:BC067173 IPI:IPI00502827 RefSeq:NP_997896.1
UniGene:Dr.51 SMR:Q6NXA3 STRING:Q6NXA3 Ensembl:ENSDART00000016488
GeneID:334854 KEGG:dre:334854 InParanoid:Q6NXA3 NextBio:20810573
Uniprot:Q6NXA3
Length = 291
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 66/114 (57%), Positives = 89/114 (78%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL +EAL +NPKI+V EG KY FKP + +KD+K LL+LL +HD G+GG+LLDDV E L
Sbjct: 116 QWLMSEALASNPKIDVREG-KYAFKPKYHLKDKKALLRLLDKHDQLGLGGVLLDDVEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++II+VTRP DK+K++FYNDK Q +DE+FQKLWRS+ VD +
Sbjct: 175 PNAAKAIKALGDQIIFVTRP-DKKKILFYNDKHCQFVVDEEFQKLWRSVPVDSI 227
>UNIPROTKB|Q5ZIE1 [details] [associations]
symbol:GTF2E2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005673 "transcription factor TFIIE complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0005673 CTD:2961
eggNOG:NOG284684 HOGENOM:HOG000008149 HOVERGEN:HBG009400 KO:K03137
OrthoDB:EOG470TJ9 OMA:LGDQIIF GeneTree:ENSGT00390000011749
EMBL:AADN02016141 EMBL:AADN02016142 EMBL:AJ720843 IPI:IPI00579019
RefSeq:XP_001233400.1 RefSeq:XP_003641238.1 UniGene:Gga.18462
UniGene:Gga.26205 SMR:Q5ZIE1 STRING:Q5ZIE1
Ensembl:ENSGALT00000016727 GeneID:771227 KEGG:gga:771227
InParanoid:Q5ZIE1 NextBio:20921431 Uniprot:Q5ZIE1
Length = 290
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 60/114 (52%), Positives = 89/114 (78%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL EAL NNPKIEV++G K+ FKP + +KD+K LL+LL +HD +G+GGI L+++ E L
Sbjct: 116 QWLMNEALVNNPKIEVVDG-KFAFKPKYNLKDKKALLRLLDKHDQQGLGGIFLEEIEEGL 174
Query: 62 PHCEKALK---NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGM 112
P+ KA+K ++I++VTRP DKR++++YNDKS +DE+F+KLWRSI +D +
Sbjct: 175 PNAHKAIKALGDQILFVTRP-DKRQLLYYNDKSCHFSVDEEFRKLWRSIPMDSI 227
>UNIPROTKB|E5RH41 [details] [associations]
symbol:GTF2E2 "Transcription initiation factor IIE subunit
beta" species:9606 "Homo sapiens" [GO:0005673 "transcription factor
TFIIE complex" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003166 Pfam:PF02186 PROSITE:PS51351 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367
EMBL:AC103959 EMBL:AC102945 GO:GO:0005673 HGNC:HGNC:4651
IPI:IPI01016053 ProteinModelPortal:E5RH41 SMR:E5RH41
Ensembl:ENST00000518599 ArrayExpress:E5RH41 Bgee:E5RH41
Uniprot:E5RH41
Length = 198
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/84 (57%), Positives = 68/84 (80%)
Query: 2 KWLSTEALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESL 61
+WL TEAL NNPKIEVI+G KY FKP + ++D+K LL+LL QHD +G+GGILL+D+ E+L
Sbjct: 117 QWLMTEALVNNPKIEVIDG-KYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEAL 175
Query: 62 PHCEKALK---NEIIYVTRPADKR 82
P+ +KA+K ++I++V RP DK+
Sbjct: 176 PNSQKAVKALGDQILFVNRP-DKK 198
>WB|WBGene00010054 [details] [associations]
symbol:F54D5.11.2 species:6239 "Caenorhabditis elegans"
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA;IDA] [GO:0005673 "transcription factor TFIIE
complex" evidence=IEA;IPI] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988 EMBL:Z66513
GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/110 (39%), Positives = 71/110 (64%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYDA 181
Query: 67 ALK---NEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVD 110
L+ +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD
Sbjct: 182 LLQQVSSEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVD 231
>UNIPROTKB|G5EG47 [details] [associations]
symbol:TFIIE-beta "TFIIE-beta protein" species:6239
"Caenorhabditis elegans" [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IDA] InterPro:IPR003166
InterPro:IPR016656 Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006367 GO:GO:0000988
EMBL:Z66513 GO:GO:0005673 KO:K03137 HSSP:P29084 OMA:LGDQIIF
GeneTree:ENSGT00390000011749 EMBL:Y08815 PIR:T22650
RefSeq:NP_496466.1 ProteinModelPortal:G5EG47 SMR:G5EG47
EnsemblMetazoa:F54D5.11.1 EnsemblMetazoa:F54D5.11.2 GeneID:174765
KEGG:cel:CELE_F54D5.11 CTD:174765 WormBase:F54D5.11 NextBio:885408
Uniprot:G5EG47
Length = 289
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/110 (39%), Positives = 71/110 (64%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
EAL NNP++ ++E K+ F+P +KIK + L+ + ++H G GGIL+ D+ E + + +
Sbjct: 123 EALPNNPRL-IMESEKFAFRPPYKIKGKTSLVAVARKHYQDGKGGILVSDLAECVANYDA 181
Query: 67 ALK---NEIIYVTRPADKRK--VMFYNDKSAQL-DLDEDFQKLWRSISVD 110
L+ +E+I V +K+K V+FYNDK +L++DF+ LWR +SVD
Sbjct: 182 LLQQVSSEVIVVPTQVNKKKDRVVFYNDKEFTFPELEDDFKALWRHVSVD 231
>DICTYBASE|DDB_G0287307 [details] [associations]
symbol:gtf2e2 "transcription initiation factor IIE2"
species:44689 "Dictyostelium discoideum" [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003166 InterPro:IPR016656
Pfam:PF02186 PIRSF:PIRSF016398 PROSITE:PS51351
dictyBase:DDB_G0287307 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000154_GR EMBL:AAFI02000100 GO:GO:0006367
GO:GO:0005673 eggNOG:NOG284684 KO:K03137 RefSeq:XP_637225.1
HSSP:P29084 STRING:Q54KJ8 EnsemblProtists:DDB0266450 GeneID:8626056
KEGG:ddi:DDB_G0287307 OMA:TNTHIEN ProtClustDB:CLSZ2742986
Uniprot:Q54KJ8
Length = 276
Score = 124 (48.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 7 EALQNNPKIEVIEGN-KYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCE 65
E L+NN KI + GN ++ FKP F ++ ++ +L LL + GGIL+ ++ ES + E
Sbjct: 108 ELLRNNEKI-IDHGNDRFSFKPKFNVRTQRDILDLLPNYP----GGILVSELAESYNNAE 162
Query: 66 ---KALKN-EIIYVTRPADKR-KVMFYNDKSAQLDLDEDFQKLWRSISV 109
K LK + I+ + A+ ++F ND+ ++ L + +W+SI +
Sbjct: 163 SDVKKLKETKQIFAIKAAESACDIIFPNDERLRVPLSSELVDMWKSIKL 211
>TAIR|locus:2128580 [details] [associations]
symbol:AT4G20330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] InterPro:IPR003166
InterPro:IPR016656 PIRSF:PIRSF016398 PROSITE:PS51351 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161552 GO:GO:0003743 GO:GO:0006367
EMBL:AL080253 GO:GO:0005673 KO:K03137 eggNOG:COG5174 OMA:RCQSSLA
UniGene:At.3546 UniGene:At.65820 HOGENOM:HOG000243420
ProtClustDB:CLSN2685336 EMBL:AF385715 EMBL:AY078018 EMBL:AY099713
EMBL:AY463608 IPI:IPI00528101 PIR:G85230 RefSeq:NP_193766.1
ProteinModelPortal:Q9SUP3 STRING:Q9SUP3 PaxDb:Q9SUP3 PRIDE:Q9SUP3
EnsemblPlants:AT4G20330.1 GeneID:827781 KEGG:ath:AT4G20330
TAIR:At4g20330 InParanoid:Q9SUP3 PhylomeDB:Q9SUP3
Genevestigator:Q9SUP3 Uniprot:Q9SUP3
Length = 286
Score = 109 (43.4 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 28/111 (25%), Positives = 61/111 (54%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+ NPK +G ++ +K + D+ LL L++++ L GI + L D ++ K
Sbjct: 113 DSLRKNPKAHY-DGRRFSYKATHDVNDKNQLLSLVRKY-LDGIAVVDLKDAYPNVMEDLK 170
Query: 67 ALK-NEIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMILRI 116
AL + IY+ + + + + ND ++ +D++F+ L+R I++ +L +
Sbjct: 171 ALSASGDIYLLSNSQE-DIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDV 220
>POMBASE|SPCC1672.08c [details] [associations]
symbol:tfa2 "transcription factor TFIIE beta subunit,
TFIIEB, Tfa2" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005673 "transcription factor TFIIE complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IDA] InterPro:IPR003166 InterPro:IPR016656 Pfam:PF02186
PIRSF:PIRSF016398 PROSITE:PS51351 PomBase:SPCC1672.08c
GO:GO:0005730 GO:GO:0006355 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003677 GO:GO:0051290 GO:GO:0006367 GO:GO:0000991
GO:GO:0005673 KO:K03137 EMBL:AB176673 EMBL:AB000475 PIR:T41052
RefSeq:NP_587879.1 IntAct:P79011 STRING:P79011
EnsemblFungi:SPCC1672.08c.1 GeneID:2539236 KEGG:spo:SPCC1672.08c
HOGENOM:HOG000216656 OMA:RCQSSLA OrthoDB:EOG4NGKWS NextBio:20800406
Uniprot:P79011
Length = 285
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 9 LQNNPKIEVIEGNK-YIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEKA 67
L+ N +I E N+ + FKP+ I+ GLL L K G+ + ++R+ P+
Sbjct: 118 LKKNNRIYYDERNETFTFKPLHNIRSGAGLLAYLDSQ--KTHVGMSIKELRDGWPNVTVE 175
Query: 68 LKN-----EIIYV-TRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISV 109
L+ E++ + TR K+++ NDKS +D++FQ++W I +
Sbjct: 176 LEELEKQGEVLLLRTRKDGVPKMVWRNDKSCDCHVDKEFQQVWHEIPI 223
>TAIR|locus:2133139 [details] [associations]
symbol:AT4G21010 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005673 "transcription
factor TFIIE complex" evidence=IEA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR003166 InterPro:IPR016656 PIRSF:PIRSF016398
PROSITE:PS51351 EMBL:CP002687 EMBL:AL080282 EMBL:AL161554
GO:GO:0003743 GO:GO:0006367 GO:GO:0005673 KO:K03137 EMBL:AY133707
IPI:IPI00528608 PIR:T10643 RefSeq:NP_193833.1 UniGene:At.32675
ProteinModelPortal:Q9SUB3 STRING:Q9SUB3 EnsemblPlants:AT4G21010.1
GeneID:827848 KEGG:ath:AT4G21010 TAIR:At4g21010
HOGENOM:HOG000243420 InParanoid:Q9SUB3 OMA:NAHMPEL PhylomeDB:Q9SUB3
ProtClustDB:CLSN2685336 Genevestigator:Q9SUB3 Uniprot:Q9SUB3
Length = 275
Score = 104 (41.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 7 EALQNNPKIEVIEGNKYIFKPVFKIKDRKGLLKLLKQHDLKGIGGILLDDVRESLPHCEK 66
++L+ NPK+ +G ++ +K IKD+K LL + + D K I L D ++ K
Sbjct: 109 DSLRKNPKVHY-DGRRFSYKATHNIKDKKQLLSFVNKSD-KVIDVSDLKDAYPNVMEDLK 166
Query: 67 ALKN--EIIYVTRPADKRKVMFYNDKSAQLDLDEDFQKLWRSISVDGMI 113
+LK+ EI ++ D ++ Y + +D++ + L+R I M+
Sbjct: 167 SLKSSGEIFWLLSNTDSKEGTVYRNNMEYPKIDDELKALFRDIIPSDML 215
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 136 136 0.00091 102 3 11 22 0.43 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 588 (63 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.77u 0.10s 14.87t Elapsed: 00:00:01
Total cpu time: 14.78u 0.10s 14.88t Elapsed: 00:00:01
Start: Thu Aug 15 15:39:28 2013 End: Thu Aug 15 15:39:29 2013