BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14246
(286 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P6A|D Chain D, The Structure Of The Activin:follistatin 315 Complex
pdb|2P6A|C Chain C, The Structure Of The Activin:follistatin 315 Complex
Length = 315
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 26 ERIICGSDGNVYSSECEMRMLNC----------------GSECDLKKSTCGEKVVPVPLH 69
E+ +CG+DG YSS C +R C C+ + T G+K +
Sbjct: 174 EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKV 233
Query: 70 HCPTTALCNHQCDDRR--EFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCNNIS 123
+LC+ C D + E VC SDN Y S C MK C GV +E+ H G CN+IS
Sbjct: 234 GRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCNSIS 291
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 53/199 (26%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRE------- 181
C +C GP+CG DG Y+ C + C + + + + CR+
Sbjct: 89 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSS 148
Query: 182 -------------SCWRV-------SKPTCGSDGNIYSNACRMKSKNC--GKHVYVVPIK 219
+C R+ + CG+DG YS+AC ++ C G+ + +
Sbjct: 149 TCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEG 208
Query: 220 RCLQG---------------FHFKG-------CARICPTIY--DPICGTDNKTYSNDCFL 255
+C++ + FK C +CP +P+C +DN TY+++C +
Sbjct: 209 KCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 268
Query: 256 QMENCRSRSLVQKLYHGQC 274
+ C S L++ + G C
Sbjct: 269 KEAACSSGVLLEVKHSGSC 287
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLK-------KSTCGEKVVP------VPLHHCPTTA 75
+CG DG Y +EC + C + +L+ K TC + P V +
Sbjct: 102 VCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCV 161
Query: 76 LCNHQCDD---RREFVCGSDNKFYKSPCEMKRENCGVG--IELSHLGPC----------- 119
CN C + +++CG+D Y S C +++ C +G I L++ G C
Sbjct: 162 TCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQC 221
Query: 120 -------NNISAHRENCPV---NCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVV 166
+ R C + C + D P+C SD Y + C MK C GV+
Sbjct: 222 TGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVL 278
>pdb|2B0U|C Chain C, The Structure Of The Follistatin:activin Complex
pdb|2B0U|D Chain D, The Structure Of The Follistatin:activin Complex
pdb|3HH2|C Chain C, Crystal Structure Of The Myostatin:follistatin 288 Complex
pdb|3HH2|D Chain D, Crystal Structure Of The Myostatin:follistatin 288 Complex
Length = 288
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 53/199 (26%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRE------- 181
C +C GP+CG DG Y+ C + C + + + + CR+
Sbjct: 89 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSS 148
Query: 182 -------------SCWRV-------SKPTCGSDGNIYSNACRMKSKNC--GKHVYVVPIK 219
+C R+ + CG+DG YS+AC ++ C G+ + +
Sbjct: 149 TCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEG 208
Query: 220 RCLQG---------------FHFKG-------CARICPTIY--DPICGTDNKTYSNDCFL 255
+C++ + FK C +CP +P+C +DN TY+++C +
Sbjct: 209 KCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 268
Query: 256 QMENCRSRSLVQKLYHGQC 274
+ C S L++ + G C
Sbjct: 269 KEAACSSGVLLEVKHSGSC 287
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLK-------KSTCGEKVVP------VPLHHCPTTA 75
+CG DG Y +EC + C + +L+ K TC + P V +
Sbjct: 102 VCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCV 161
Query: 76 LCNHQCDD---RREFVCGSDNKFYKSPCEMKRENCGVG--IELSHLGPC----------- 119
CN C + +++CG+D Y S C +++ C +G I L++ G C
Sbjct: 162 TCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQC 221
Query: 120 -------NNISAHRENCPV---NCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVV 166
+ R C + C + D P+C SD Y + C MK C GV+
Sbjct: 222 TGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVL 278
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 26 ERIICGSDGNVYSSECEMRMLNC----------------GSECDLKKSTCGEKVVPVPLH 69
E+ +CG+DG YSS C +R C C+ + T G+K +
Sbjct: 174 EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKV 233
Query: 70 HCPTTALCNHQCDDRR--EFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCN 120
+LC+ C D + E VC SDN Y S C MK C GV +E+ H G CN
Sbjct: 234 GRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 288
>pdb|1Y1B|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor
Length = 48
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 230 CARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C IC YDP+CG+D TY N C L +CRS + ++ ++ G+C
Sbjct: 4 CPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 179 CRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
C C P CGSDG Y NAC + +C
Sbjct: 4 CPLICTMQYDPVCGSDGITYGNACMLLGASC 34
>pdb|1TGS|I Chain I, Three-Dimensional Structure Of The Complex Between
Pancreatic Secretory Inhibitor (Kazal Type) And
Trypsinogen At 1.8 Angstroms Resolution. Structure
Solution, Crystallographic Refinement And Preliminary
Structural Interpretation
Length = 56
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP IY+P+CGTD TYSN+C L EN + ++ V G C
Sbjct: 16 CPKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVV 216
C ++ P CG+DG YSN C + S+N + V+
Sbjct: 16 CPKIYNPVCGTDGITYSNECVLCSENKKRQTPVL 49
>pdb|3SEK|C Chain C, Crystal Structure Of The Myostatin:follistatin-Like 3
Complex
Length = 209
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 17 CPVSCEGEKERI-ICGSDGNVYSSECEMRMLNCGSECDLK-------KSTCGEKVVPVPL 68
C C G R+ +CGSDG Y ECE+R C DL + +C V P P
Sbjct: 86 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQ 145
Query: 69 H---------HCPT--TALCNHQCDDRREFVCGSDNKFYKSPCEMKRENCGVG--IELSH 115
HC A C +E CG++N Y S C M++ C +G I + H
Sbjct: 146 SCVVDQTGSAHCVVCRAAPCPVPSSPGQEL-CGNNNVTYISSCHMRQATCFLGRSIGVRH 204
Query: 116 LGPC 119
G C
Sbjct: 205 AGSC 208
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 241 ICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTE 279
+CG+D TY ++C L+ CR + +Y G+C + E
Sbjct: 99 VCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCE 137
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 41/159 (25%)
Query: 126 RENCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTC-GQGVVRVSKRHCQTTRHCRESCW 184
R C +C P +CGSDG Y+ C+++ C G + V R CR+SC
Sbjct: 83 RCECAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRG-----RCRKSCE 137
Query: 185 RVSKP---TCGSD--GNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYD 239
V P +C D G+ + CR A CP
Sbjct: 138 HVVCPRPQSCVVDQTGSAHCVVCR---------------------------AAPCPVPSS 170
Query: 240 P---ICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCG 275
P +CG +N TY + C ++ C + + G C
Sbjct: 171 PGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCA 209
>pdb|3B4V|C Chain C, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|D Chain D, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|G Chain G, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|H Chain H, X-Ray Structure Of Activin In Complex With Fstl3
Length = 237
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 17 CPVSCEGEKERI-ICGSDGNVYSSECEMRMLNCGSECDLK-------KSTCGEKVVPVPL 68
C C G R+ +CGSDG Y ECE+R C DL + +C V P P
Sbjct: 95 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQ 154
Query: 69 H---------HCPT--TALCNHQCDDRREFVCGSDNKFYKSPCEMKRENCGVG--IELSH 115
HC A C +E CG++N Y S C M++ C +G I + H
Sbjct: 155 SCVVDQTGSAHCVVCRAAPCPVPSSPGQEL-CGNNNVTYISSCHMRQATCFLGRSIGVRH 213
Query: 116 LGPC 119
G C
Sbjct: 214 AGSC 217
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 41/165 (24%)
Query: 126 RENCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTC-GQGVVRVSKRHCQTTRHCRESCW 184
R C +C P +CGSDG Y+ C+++ C G + V R CR+SC
Sbjct: 92 RCECAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRG-----RCRKSCE 146
Query: 185 RVSKP---TCGSD--GNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYD 239
V P +C D G+ + CR A CP
Sbjct: 147 HVVCPRPQSCVVDQTGSAHCVVCR---------------------------AAPCPVPSS 179
Query: 240 P---ICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEEP 281
P +CG +N TY + C ++ C + + G C EEP
Sbjct: 180 PGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTPEEP 224
>pdb|2LEO|A Chain A, Solution Structure Of Esophageal Cancer-Related Gene 2
Length = 66
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP Y P+CG+D TY N+C L E+ +S VQ L+ G C
Sbjct: 26 CPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
>pdb|1TBR|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBR|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
Length = 103
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRMK-SKNCGKHVYV-VPIKRCLQGFHFKGCARICPTIYD 239
+C CGSDG YSN C + +K GK V V C C Y
Sbjct: 7 ACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGDEYK 66
Query: 240 PICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
P+CG+D+ TY N+C L+ + S V+ + G C
Sbjct: 67 PVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 142 ICGSDGNVYKTNCQM--KLLTCGQGVVRVSKRHCQTTRH---CRESCWRVSKPTCGSDGN 196
+CGSDG Y C + +V+V C+ C+E KP CGSD
Sbjct: 15 VCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGDEYKPVCGSDDI 74
Query: 197 IYSNACRMK 205
Y N CR++
Sbjct: 75 TYDNNCRLE 83
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTALCNHQCDDRREFV 88
+CGSDG YS+ C + + +L K G P +C D + V
Sbjct: 15 VCGSDGETYSNPCTLNCAKFNGKPELVKVHDG------PCEPDEDEDVCQECDGDEYKPV 68
Query: 89 CGSDNKFYKSPCEMK--RENCGVGIELSHLGPC 119
CGSD+ Y + C ++ + G+EL H GPC
Sbjct: 69 CGSDDITYDNNCRLECASISSSPGVELKHEGPC 101
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 88 VCGSDNKFYKSPCEM--KRENCGVGIELSHLGPCNNISAHRENCPVNCDQAPLDGPICGS 145
VCGSD + Y +PC + + N + H GPC E+ CD P+CGS
Sbjct: 15 VCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCE--PDEDEDVCQECDGDEYK-PVCGS 71
Query: 146 DGNVYKTNCQMK 157
D Y NC+++
Sbjct: 72 DDITYDNNCRLE 83
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEE 280
CP +CG+D +TYSN C L + + K++ G C +P E+
Sbjct: 8 CPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPC-EPDED 53
>pdb|1Y1C|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor Analogue
Length = 48
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
IC YDP+CG+D TY N C L + RS + ++ ++ G+C
Sbjct: 7 ICTMQYDPVCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48
>pdb|2ARP|F Chain F, Activin A In Complex With Fs12 Fragment Of Follistatin
Length = 152
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSK 188
C +C GP+CG DG Y+ C + C + + Q C+++C V
Sbjct: 29 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKE----QPELEVQYQGKCKKTCRDVFC 84
Query: 189 PTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICP---TIYDPICGTD 245
P S+ C + N + Y V C RICP + +CG D
Sbjct: 85 PG--------SSTCVVDQTN---NAYCVT------------CNRICPEPSSSEQSLCGND 121
Query: 246 NKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
TYS+ C L+ C + Y G+C
Sbjct: 122 GVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLK-------KSTCGEKVVP------VPLHHCPTTA 75
+CG DG Y +EC + C + +L+ K TC + P V +
Sbjct: 42 VCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCV 101
Query: 76 LCNHQCDD---RREFVCGSDNKFYKSPCEMKRENCGVG--IELSHLGPC 119
CN C + + +CG+D Y S C +++ C +G I L++ G C
Sbjct: 102 TCNRICPEPSSSEQSLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 26 ERIICGSDGNVYSSECEMRMLNC 48
E+ +CG+DG YSS C +R C
Sbjct: 114 EQSLCGNDGVTYSSACHLRKATC 136
>pdb|1YU6|C Chain C, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|D Chain D, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 185
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 61/166 (36%), Gaps = 40/166 (24%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRES------------------ 182
PICG+DG V + C + G +SK H CRE+
Sbjct: 28 PICGTDG-VTHSECLLCAYNIEYGT-NISKEH---DGECREAVPMDCSRYPNTTSEEGKV 82
Query: 183 ---CWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARI------ 233
C + P CG+DG Y N C + + N + V + G K A +
Sbjct: 83 MILCNKALNPVCGTDGVTYDNECVLCAHNLEQGTSV---GKKHDGECRKELAAVSVDCSE 139
Query: 234 -----CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 140 YPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE-----KVVPVPLHHCPTTALCNHQCDD 83
+CG+DG Y +EC + N + K GE V V P A C
Sbjct: 93 VCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDCSEYPKPA-----CTL 147
Query: 84 RREFVCGSDNKFYKSPCEM---KRENCGVGIELSHLGPC 119
+CGSDNK Y + C E+ G + LSH G C
Sbjct: 148 EYRPLCGSDNKTYGNKCNFCNAVVESNGT-LTLSHFGKC 185
>pdb|1PCE|A Chain A, Solution Structure And Dynamics Of Pec-60, A Protein Of
The Kazal Type Inhibitor Family, Determined By Nuclear
Magnetic Resonance Spectroscopy
Length = 60
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C IYDP+CGTD TY ++C L + ++ +Q + G+C
Sbjct: 20 CSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 177 RHCRES--CWRVSKPTCGSDGNIYSNACRM 204
H ES C R+ P CG+DG Y + C++
Sbjct: 12 EHMTESPDCSRIYDPVCGTDGVTYESECKL 41
>pdb|1LR7|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin, Complexed With The Heparin Analogue Sucrose
Octasulphate (Sos)
pdb|1LR8|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin, Complexed With The Heparin Analogue D-Myo-
Inositol Hexasulphate (Ins6s)
pdb|1LR9|A Chain A, Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin
Length = 74
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 236 TIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
T P+CG D KTY N+C L C+ + ++ Y G+C
Sbjct: 35 TWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC 73
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQ 163
C +C GP+CG DG Y+ C + C +
Sbjct: 27 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKE 61
>pdb|1Z7K|B Chain B, Crystal Structure Of Trypsin- Ovomucoid Turkey Egg White
Inhibitor Complex
Length = 62
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+C +P+CGTD TY N+C L N + V K + G+C
Sbjct: 21 LCNKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGEC 62
>pdb|1OVO|A Chain A, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|B Chain B, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|C Chain C, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|D Chain D, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|3OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
Modified Ovomucoid Inhibitor Third Domains From Silver
Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
(Omjpq3(Asterisk))
Length = 56
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP Y P+CG+DNKTYSN C S + + G+C
Sbjct: 16 CPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC 56
>pdb|3QTL|D Chain D, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
Length = 75
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDPIC 242
C KP CG++G +Y N C + + P + + C +C YDP+C
Sbjct: 3 CPHTYKPVCGANGEVYDNECFLNKAG------IEPAESWETCRGHELCPSVCTEEYDPVC 56
Query: 243 GTDNKTYSNDCF 254
+ K Y N C
Sbjct: 57 -VEGKIYGNRCM 67
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 9/41 (21%)
Query: 234 CPTIYDPICGTDNKTYSNDCFL---------QMENCRSRSL 265
CP Y P+CG + + Y N+CFL E CR L
Sbjct: 3 CPHTYKPVCGANGEVYDNECFLNKAGIEPAESWETCRGHEL 43
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSKPTCGSDGNIYSN 200
P+CG++G VY C L S C+ C C P C +G IY N
Sbjct: 9 PVCGANGEVYDNEC---FLNKAGIEPAESWETCRGHELCPSVCTEEYDPVC-VEGKIYGN 64
Query: 201 ACRMKSKNCGK 211
C M+S CGK
Sbjct: 65 RC-MQSHFCGK 74
>pdb|1CGJ|I Chain I, Three-Dimensional Structure Of The Complexes Between
Bovine ChymotrypsinogenA And Two Recombinant Variants Of
Human Pancreatic Secretory Trypsin Inhibitor
(Kazal-Type)
Length = 56
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRS--LVQK 268
C Y P+CGTD TY N+C L EN + ++ L+QK
Sbjct: 16 CTLEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQK 52
>pdb|1CGI|I Chain I, Three-Dimensional Structure Of The Complexes Between
Bovine ChymotrypsinogenA And Two Recombinant Variants Of
Human Pancreatic Secretory Trypsin Inhibitor
(Kazal-Type)
pdb|1HPT|A Chain A, Three-Dimensional Structure Of A Recombinant Variant Of
Human Pancreatic Secretory Trypsin Inhibitor (Kazal
Type)
Length = 56
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRS--LVQK 268
C Y P+CGTD TY N+C L EN + ++ L+QK
Sbjct: 16 CTYEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQK 52
>pdb|2KCX|A Chain A, Solution Nmr Structure Of Kazal-1 Domain Of Human
Follistatin-Related Protein 3 (Fstl-3). Northeast
Structural Genomics Target Hr6186a
Length = 74
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 241 ICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+CG+D TY ++C L+ CR + +Y G+C
Sbjct: 39 VCGSDGATYRDECELRAARCRGHPDLSVMYRGRC 72
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 17 CPVSCEGEKERI-ICGSDGNVYSSECEMRMLNCGSECDL 54
C C G R+ +CGSDG Y ECE+R C DL
Sbjct: 26 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDL 64
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 110 GIELSHLGPCNNISAH-RENCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTC 161
G+E C + R C +C P +CGSDG Y+ C+++ C
Sbjct: 6 GVECGPGKACRMLGGRPRCECAPDCSGLPARLQVCGSDGATYRDECELRAARC 58
>pdb|2KMO|A Chain A, Solution Structure Of Native Leech-Derived Tryptase
Inhibitor, Ldti
pdb|2KMP|A Chain A, Solution Structure Of Intermeidate Iia Of Leeck-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMQ|A Chain A, Solution Structure Of Intermediate Iib Of Leech-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMR|A Chain A, Solution Structure Of Intermediate Iic Of Leech-Derived
Tryptase Inhibitor, Ldti
Length = 44
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQ 256
CP I P+CG+D +TY+N C +
Sbjct: 6 CPKILKPVCGSDGRTYANSCIAR 28
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 182 SCWRVSKPTCGSDGNIYSNAC 202
+C ++ KP CGSDG Y+N+C
Sbjct: 5 ACPKILKPVCGSDGRTYANSC 25
>pdb|1LDT|L Chain L, Complex Of Leech-Derived Tryptase Inhibitor With Porcine
Trypsin
pdb|1AN1|I Chain I, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX
Length = 46
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQ 256
CP I P+CG+D +TY+N C +
Sbjct: 6 CPKILKPVCGSDGRTYANSCIAR 28
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 182 SCWRVSKPTCGSDGNIYSNAC 202
+C ++ KP CGSDG Y+N+C
Sbjct: 5 ACPKILKPVCGSDGRTYANSC 25
>pdb|3PIS|D Chain D, Crystal Structure Of Carcinoscorpius Rotundicauda Serine
Protease Inhibitor Domain 1
pdb|3PIS|A Chain A, Crystal Structure Of Carcinoscorpius Rotundicauda Serine
Protease Inhibitor Domain 1
Length = 42
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 234 CPTIYDPICGTDNKTYSNDCFL 255
CP Y P+CG + + Y N+CFL
Sbjct: 3 CPHTYKPVCGANGEVYDNECFL 24
>pdb|1CT2|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Thr18i
In Complex With Sgpb
Length = 51
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C T Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTTEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2F3C|I Chain I, Crystal Structure Of Infestin 1, A Kazal-Type
Serineprotease Inhibitor, In Complex With Trypsin
Length = 55
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRMKSKNCGKH 212
+C RV CGSDGN YSN C + +C KH
Sbjct: 7 ACPRVLHRVCGSDGNTYSNPCTL---DCAKH 34
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP + +CG+D TYSN C L + + +++ G C
Sbjct: 8 CPRVLHRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPC 48
>pdb|2JXD|A Chain A, Nmr Structure Of Human Serine Protease Inhibitor Kazal
Type Ii (Spink2)
Length = 62
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP ++P+CG+D TY+N+C L M+ ++ + +G C
Sbjct: 22 CPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
>pdb|1UVG|A Chain A, Solution Structure Of The 15th Domain Of Lekti
Length = 78
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRES 182
P+CG DG Y C + C + ++R + H ++T C ES
Sbjct: 26 PVCGDDGQTYNNPCML----CHENLIRQTNTHIRSTGKCEES 63
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+CP P+CG D +TY+N C L EN ++ G+C
Sbjct: 19 LCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60
>pdb|3TJQ|A Chain A, N-Domain Of Htra1
Length = 140
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 239 DPICGTDNKTYSNDCFLQMENCRSRSL----VQKLYHGQCG 275
+P+CG+D TY+N C L+ + RS L V L G CG
Sbjct: 98 EPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACG 138
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 18 PVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTALC 77
P CEG + R CG CE+ G+ C L++ CGE + V P +A
Sbjct: 32 PEHCEGGRARDACGC--------CEVCGAPEGAACGLQEGPCGEGLQCVVPFGVPASATV 83
Query: 78 NHQCDD------RREFVCGSDNKFYKSPCEMK 103
+ E VCGSD Y + C+++
Sbjct: 84 RRRAQAGLCVCASSEPVCGSDANTYANLCQLR 115
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 187 SKPTCGSDGNIYSNACRMKSKN 208
S+P CGSD N Y+N C++++ +
Sbjct: 97 SEPVCGSDANTYANLCQLRAAS 118
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 141 PICGSDGNVYKTNCQMKLLT 160
P+CGSD N Y CQ++ +
Sbjct: 99 PVCGSDANTYANLCQLRAAS 118
>pdb|2ERW|A Chain A, Crystal Structure Of Infestin 4, A Factor Xiia Inhibitor
Length = 56
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 238 YDPICGTDNKTYSNDCFLQMENCRSRSLVQKL---YHGQCGQPTEE 280
Y P+CG+D KTY N C L NC +++ V L + G+C + E
Sbjct: 12 YVPVCGSDGKTYGNPCML---NCAAQTKVPGLKLVHEGRCQRSNVE 54
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQG 224
+C+R P CGSDG Y N C + NC V +K +G
Sbjct: 7 ACFRNYVPVCGSDGKTYGNPCML---NCAAQTKVPGLKLVHEG 46
>pdb|1UVF|A Chain A, Solution Structure Of The Structured Part Of The 15th
Domain Of Lekti
Length = 61
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+CP P+CG D +TY+N C L EN ++ G+C
Sbjct: 19 LCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHC 179
P+CG DG Y C + C + ++R + H ++T C
Sbjct: 26 PVCGDDGQTYNNPCML----CHENLIRQTNTHIRSTGKC 60
>pdb|1CT0|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ser18i
In Complex With Sgpb
Length = 51
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C + Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTSEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2GKT|I Chain I, Crystal Structure Of The P14'-Ala32 Variant Of The N-
Terminally Truncated Omtky3-Del(1-5)
pdb|2GKV|A Chain A, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
Complex
pdb|2GKV|B Chain B, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
Complex
Length = 51
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY+N C S + + G+C
Sbjct: 11 CTLEYRPLCGSDNKTYANKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGP|I Chain I, Ala 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTAEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1CT4|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Val18i
In Complex With Sgpb
Length = 51
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTVEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|4OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
Modified Ovomucoid Inhibitor Third Domains From Silver
Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
(Omjpq3(Asterisk))
Length = 56
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 16 CTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
>pdb|2OVO|A Chain A, The Crystal And Molecular Structure Of The Third Domain Of
Silver Pheasant Ovomucoid (Omsvp3)
Length = 56
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 16 CTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
>pdb|1IY6|A Chain A, Solution Structure Of Omsvp3 Variant, P14cN39C
Length = 54
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 14 CTMEYRPLCGSDNKTYGNKCNFCCAVVESNGTLTLSHFGKC 54
>pdb|1SGN|I Chain I, Asn 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTNEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1IY5|A Chain A, Solution Structure Of Wild Type Omsvp3
Length = 54
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 14 CTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 54
>pdb|1CSO|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ile18i
In Complex With Sgpb
Length = 51
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTIEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1CHO|I Chain I, Crystal And Molecular Structures Of The Complex Of Alpha-
Chymotrypsin With Its Inhibitor Turkey Ovomucoid Third
Domain At 1.8 Angstroms Resolution
pdb|3SGB|I Chain I, Structure Of The Complex Of Streptomyces Griseus Protease
B And The Third Domain Of The Turkey Ovomucoid Inhibitor
At 1.8 Angstroms Resolution
pdb|1PPF|I Chain I, X-Ray Crystal Structure Of The Complex Of Human Leukocyte
Elastase (Pmn Elastase) And The Third Domain Of The
Turkey Ovomucoid Inhibitor
pdb|1OMT|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
(Standard Noesy Analysis)
pdb|1OMU|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
(Refined Model Using Network Editing Analysis)
pdb|1TUR|A Chain A, Solution Structure Of Turkey Ovomucoid Third Domain As
Determined From Nuclear Magnetic Resonance Data
pdb|1TUS|A Chain A, Solution Structure Of Reactive-Site Hydrolyzed Turkey
Ovomucoid Third Domain By Nuclear Magnetic Resonance And
Distance Geometry Methods
Length = 56
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 16 CTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
>pdb|1DS2|I Chain I, Crystal Structure Of Sgpb:omtky3-Coo-Leu18i
Length = 51
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTXEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1DS3|I Chain I, Crystal Structure Of Omtky3-Ch2-Asp19i
Length = 51
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTXDYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1M8B|A Chain A, Solution Structure Of The C State Of Turkey Ovomucoid At
Ph 2.5
pdb|1M8C|A Chain A, Solution Structure Of The T State Of Turkey Ovomucoid At
Ph 2.5
Length = 56
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 16 CTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
>pdb|1HJA|I Chain I, Lys 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Alpha-Chymotrypsin
pdb|2NU3|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
pdb|2NU4|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
Length = 51
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTKEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGR|I Chain I, Leu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
pdb|1R0R|I Chain I, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|2GKR|I Chain I, Crystal Structure Of The N-Terminally Truncated Omtky3-
Del(1-5)
Length = 51
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|2SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTEEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2NU0|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
Aromatic P1 Variants Trp18i, His18i, Phe18i, And Tyr18i
Length = 51
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTWEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGQ|I Chain I, Gly 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTGEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|2SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTDEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|3SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTQEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2SGP|I Chain I, Pro 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
Length = 51
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTPEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2NU2|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
Length = 51
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTREYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2SGF|I Chain I, Phe 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTFEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|2NU1|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
Aromatic P1 Variants Trp18i, His18i, Phe18i And Tyr18i
Length = 51
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTHEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1SGY|I Chain I, Tyr 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
Length = 51
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 11 CTYEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>pdb|1KMA|A Chain A, Nmr Structure Of The Domain-I Of The Kazal-Type Thrombin
Inhibitor Dipetalin
Length = 55
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 227 FKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQ 276
F+G CP +CG+D TYSN C L + +++ G C +
Sbjct: 1 FQGNPCECPRALHRVCGSDGNTYSNPCMLTCAKHEGNPDLVQVHEGPCDE 50
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRMKSKNCGKH 212
C R CGSDGN YSN C + C KH
Sbjct: 7 ECPRALHRVCGSDGNTYSNPCMLT---CAKH 34
>pdb|4GI3|C Chain C, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 83
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 230 CARICPTIYDPICGTDNKTYSNDCFLQMENCRSR 263
C ICP IY P+C D+ + D +L + C R
Sbjct: 21 CPSICPLIYAPVCVEDS---NQDFYLFVNECEVR 51
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,249,600
Number of Sequences: 62578
Number of extensions: 390081
Number of successful extensions: 989
Number of sequences better than 100.0: 64
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 278
length of query: 286
length of database: 14,973,337
effective HSP length: 98
effective length of query: 188
effective length of database: 8,840,693
effective search space: 1662050284
effective search space used: 1662050284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)