RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14246
(286 letters)
>1tbr_R RHODNIIN; complex (serine protease-inhibitor), kazal-type
inhibitor, T complex (serine protease-inhibitor)
complex; 2.60A {Rhodnius prolixus} SCOP: g.68.1.1
g.68.1.1 PDB: 1tbq_R
Length = 103
Score = 66.7 bits (162), Expect = 2e-14
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 179 CRESCWRVSKPTCGSDGNIYSNACRMKSKNC--GKHVYVVPIKRCLQGFHFKGCARICPT 236
+C CGSDG YSN C + + V C C
Sbjct: 4 EPCACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGD 63
Query: 237 IYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
Y P+CG+D+ TY N+C L+ + S V+ + G C
Sbjct: 64 EYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101
Score = 51.7 bits (123), Expect = 6e-09
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 17 CPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTAL 76
P +C R+ CGSDG YS+ C + + +L K G C
Sbjct: 4 EPCACPHALHRV-CGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQE--- 59
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
D + VCGSD+ Y + C ++ + G+EL H GPC
Sbjct: 60 ---CDGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101
Score = 42.8 bits (100), Expect = 8e-06
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 229 GCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQP 277
G CP +CG+D +TYSN C L + + K++ G C
Sbjct: 3 GEPCACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPD 51
Score = 42.1 bits (98), Expect = 2e-05
Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 7/87 (8%)
Query: 128 NCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKR-----HCQTTRHCRES 182
P C +CGSDG Y C + V + C+E
Sbjct: 3 GEPCACP--HALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQEC 60
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNC 209
KP CGSD Y N CR++ +
Sbjct: 61 DGDEYKPVCGSDDITYDNNCRLECASI 87
Score = 42.1 bits (98), Expect = 2e-05
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENCGVGIELSHLGPCNNISAHRENCPVNCDQA 136
C VCGSD + Y +PC + EL + E+ CD
Sbjct: 4 EPCACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGD 63
Query: 137 PLDGPICGSDGNVYKTNCQMKLLTC--GQGVVRVSKRHCQT 175
P+CGSD Y NC+++ + GV + C+T
Sbjct: 64 EYK-PVCGSDDITYDNNCRLECASISSSPGVELKHEGPCRT 103
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot
motif, TGF- fold, disulfide linked dimer, CLE PAIR of
basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens}
PDB: 2b0u_C* 2p6a_D
Length = 288
Score = 62.7 bits (151), Expect = 1e-11
Identities = 51/298 (17%), Positives = 92/298 (30%), Gaps = 63/298 (21%)
Query: 17 CPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKS----TCGEKVVPVPLHHCP 72
C V + E + C S G + +S E + + + + C C
Sbjct: 13 CQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCG 72
Query: 73 TTALCNHQ--------------CDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHL 116
C + VCG D K Y++ C + + C +E+ +
Sbjct: 73 PGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQ 132
Query: 117 GPCNNI------------------SAHRENCPVNCDQAPLDG-PICGSDGNVYKTNCQMK 157
G C +A+ C C + +CG+DG Y + C ++
Sbjct: 133 GRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLR 192
Query: 158 LLTCGQGV-VRVSKRHCQTTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVV 216
TC G + ++ E C D + C + + C
Sbjct: 193 KATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCP------ 246
Query: 217 PIKRCLQGFHFKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+P+C +DN TY+++C ++ C S L++ + G C
Sbjct: 247 -----------------DSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 287
Score = 44.6 bits (104), Expect = 1e-05
Identities = 25/146 (17%), Positives = 41/146 (28%), Gaps = 22/146 (15%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSKPTCGSDGNIYSN 200
C S G + + + + + C+E+C CG N
Sbjct: 24 EECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETC---ENVDCGPGKKCRMN 80
Query: 201 ACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDPICGTDNKTYSNDCFLQMENC 260
C T P+CG D KTY N+C L C
Sbjct: 81 KKNKPRCVCAPDCS-------------------NITWKGPVCGLDGKTYRNECALLKARC 121
Query: 261 RSRSLVQKLYHGQCGQPTEEPKNYLY 286
+ + ++ Y G+C + +
Sbjct: 122 KEQPELEVQYQGRCKKTCRDVFCPGS 147
Score = 38.1 bits (87), Expect = 0.002
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 22/139 (15%)
Query: 4 CMSQERNKNGAIACPVSCEG--EKERIICGSDGNVYSSECEMRMLNC------------- 48
C+ + N + C C E+ +CG+DG YSS C +R C
Sbjct: 150 CVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGK 209
Query: 49 ---GSECDLKKSTCGEKVVPVPLHHCPTTALCNHQCDDRREF--VCGSDNKFYKSPCEMK 103
C+ + T G+K + +LC+ C D + VC SDN Y S C MK
Sbjct: 210 CIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMK 269
Query: 104 RENC--GVGIELSHLGPCN 120
C GV +E+ H G CN
Sbjct: 270 EAACSSGVLLEVKHSGSCN 288
>1uvf_A Serine proteinase inhibitor kazal type 5; trypsin inhibitor,
protease; NMR {Homo sapiens}
Length = 61
Score = 56.4 bits (136), Expect = 4e-11
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 221 CLQGFHFKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C +CP P+CG D +TY+N C L EN ++ G+C
Sbjct: 7 CKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60
Score = 33.7 bits (77), Expect = 0.006
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 70 HCPTTALCNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
+ C + VCG D + Y +PC + EN + G C
Sbjct: 9 DYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60
Score = 31.8 bits (72), Expect = 0.025
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 172 HCQTTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYV 215
+ C + KP CG DG Y+N C + +N +
Sbjct: 9 DYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNT 52
Score = 29.5 bits (66), Expect = 0.18
Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 16 ACPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
C + + + CG DG Y++ C + N + + + G+
Sbjct: 15 RIGYLCPKDLKPV-CGDDGQTYNNPCMLCHENLIRQTNTHIRSTGK 59
>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage
on PAIR of BAS residues, glycoprotein, growth factor,
hormone, secreted; HET: NAG; 2.48A {Homo sapiens}
Length = 237
Score = 59.9 bits (144), Expect = 7e-11
Identities = 35/221 (15%), Positives = 62/221 (28%), Gaps = 43/221 (19%)
Query: 81 CDDRREFVCGSDNKFYKSPCEMKRENCGVG----IELSHLGPCNNISAHRE--------- 127
D C + + + + + L H PC + E
Sbjct: 27 QTDVTRAECCASGNIDTAWSNLTHPGNKINLLGFLGLVHCLPCKDSCDGVECGPGKACRM 86
Query: 128 -------NCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCR 180
C +C P +CGSDG Y+ C+++ C +S + R
Sbjct: 87 LGGRPRCECAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHP-DLSVMYRGRCRKSC 145
Query: 181 ESCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDP 240
E +C D ++ + + +
Sbjct: 146 EHVVCPRPQSCVVDQTGSAHCVVCR----------------------AAPCPVPSSPGQE 183
Query: 241 ICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEEP 281
+CG +N TY + C ++ C + + G C EEP
Sbjct: 184 LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTPEEP 224
Score = 44.5 bits (104), Expect = 1e-05
Identities = 34/134 (25%), Positives = 44/134 (32%), Gaps = 20/134 (14%)
Query: 17 CPVSCEGEKERI-ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTA 75
C C G R+ +CGSDG Y ECE+R C DL G CP
Sbjct: 95 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQ 154
Query: 76 LCNHQ-----------------CDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHL 116
C + +CG++N Y S C M++ C G I + H
Sbjct: 155 SCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHA 214
Query: 117 GPCNNISAHRENCP 130
G C
Sbjct: 215 GSCAGTPEEPPGGE 228
>1uvg_A Serine proteinase inhibitor kazal type 5; trypsin inhibitor,
protease; NMR {Homo sapiens}
Length = 78
Score = 56.3 bits (135), Expect = 8e-11
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 221 CLQGFHFKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEE 280
C +CP P+CG D +TY+N C L EN ++ G+C + +
Sbjct: 7 CKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESSTP 66
Query: 281 PKN 283
Sbjct: 67 GTT 69
Score = 33.5 bits (76), Expect = 0.009
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 70 HCPTTALCNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCNNISAHRE 127
+ C + VCG D + Y +PC + EN + G C S
Sbjct: 9 DYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESSTPGT 68
Query: 128 NCP 130
Sbjct: 69 TAA 71
Score = 32.4 bits (73), Expect = 0.025
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 172 HCQTTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYV 215
+ C + KP CG DG Y+N C + +N +
Sbjct: 9 DYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNT 52
Score = 27.8 bits (61), Expect = 1.2
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 17 CPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
C + + +CG DG Y++ C + N + + + G+
Sbjct: 16 IGYLCPKDL-KPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGK 59
>1yu6_C Ovomucoid; protein proteinase inhibitor, protease, hydrolase; 1.55A
{Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1z7k_B*
Length = 185
Score = 57.7 bits (138), Expect = 2e-10
Identities = 34/159 (21%), Positives = 51/159 (32%), Gaps = 26/159 (16%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRH-----------------CRESC 183
PICG+DG + + C + G + + C
Sbjct: 28 PICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTTSEEGKVMILC 86
Query: 184 WRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARIC--------P 235
+ P CG+DG Y N C + + N + V + C
Sbjct: 87 NKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDCSEYPKPACT 146
Query: 236 TIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
Y P+CG+DNKTY N C S + + G+C
Sbjct: 147 LEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 48.9 bits (115), Expect = 3e-07
Identities = 34/147 (23%), Positives = 47/147 (31%), Gaps = 12/147 (8%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTAL------CNHQCD 82
ICG+DG +S EC + N ++ K GE VP+ C+
Sbjct: 29 ICGTDGVTHS-ECLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTTSEEGKVMILCN 87
Query: 83 DRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCNNISAHRENCPVNCDQA---P 137
VCG+D Y + C + N G + H G C A +
Sbjct: 88 KALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDCSEYPKPACTL 147
Query: 138 LDGPICGSDGNVYKTNCQMKLLTCGQG 164
P+CGSD Y C
Sbjct: 148 EYRPLCGSDNKTYGNKCNFCNAVVESN 174
Score = 48.9 bits (115), Expect = 3e-07
Identities = 27/121 (22%), Positives = 39/121 (32%), Gaps = 3/121 (2%)
Query: 1 MAFCMSQERNKNGAIACPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCG 60
C + + C +CG+DG Y +EC + N + K G
Sbjct: 66 PMDCSRYPNTTSEEGKVMILCNKA-LNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDG 124
Query: 61 EKVVPVPLHHCPTTALCNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGP 118
E + + C +CGSDNK Y + C + LSH G
Sbjct: 125 ECRKELAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGK 184
Query: 119 C 119
C
Sbjct: 185 C 185
Score = 44.2 bits (103), Expect = 1e-05
Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 23/155 (14%)
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENCGVGIELSHLGPCNNISAHRENCPVNCDQA 136
C + +CG+D + S C + N G +S A +C +
Sbjct: 18 DVLVCTEDLRPICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTT 76
Query: 137 PLDG-----------PICGSDGNVYKTNCQMKLLTCGQG-----------VVRVSKRHCQ 174
+G P+CG+DG Y C + QG ++
Sbjct: 77 SEEGKVMILCNKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVD 136
Query: 175 TTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
+ + + +C +P CGSD Y N C +
Sbjct: 137 CSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVV 171
Score = 43.9 bits (102), Expect = 1e-05
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 15/120 (12%)
Query: 179 CRESCWRVSKPTCGSDGNIYSNACRMKSKNC--------------GKHVYVVPIKRCLQG 224
C +P CG+DG +S C + + N + V + +
Sbjct: 18 DVLVCTEDLRPICGTDGVTHSE-CLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTT 76
Query: 225 FHFKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEEPKNY 284
+C +P+CGTD TY N+C L N + V K + G+C +
Sbjct: 77 SEEGKVMILCNKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVD 136
>2leo_A Serine protease inhibitor kazal-type 7; esophageal cancer-related
gene 2, hydrol inhibitor; NMR {Homo sapiens}
Length = 66
Score = 52.3 bits (125), Expect = 2e-09
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 227 FKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
+ A CP Y P+CG+D TY N+C L E+ +S VQ L+ G C
Sbjct: 19 YPVVAIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 32.3 bits (73), Expect = 0.020
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 70 HCPTTALCNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
+ C VCGSD Y + C + E+ ++ H G C
Sbjct: 15 IYKKYPVVAIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 30.8 bits (69), Expect = 0.085
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 172 HCQTTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
+ C P CGSD Y N C + +++
Sbjct: 15 IYKKYPVVAIPCPITYLPVCGSDYITYGNECHLCTESL 52
Score = 28.1 bits (62), Expect = 0.76
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 1 MAFCMSQERNKNGAIACPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCG 60
C ++ AI CP +CGSD Y +EC + + S ++ G
Sbjct: 10 KVDCSIYKKYPVVAIPCP-----ITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDG 64
Query: 61 E 61
Sbjct: 65 S 65
>2f3c_I Thrombin inhibitor infestin; serine protease - inhibitor complex,
kazal-type domain, hydrolase/hydrolase inhibitor
complex; 2.50A {Triatoma infestans} SCOP: g.68.1.1 PDB:
1kma_A
Length = 55
Score = 51.4 bits (123), Expect = 2e-09
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 227 FKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEE 280
+ CP + +CG+D TYSN C L + + +++ G C +
Sbjct: 1 LEENDCACPRVLHRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDPNDHD 54
Score = 32.5 bits (74), Expect = 0.013
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNC 209
C RV CGSDGN YSN C +
Sbjct: 8 CPRVLHRVCGSDGNTYSNPCTLDCAKH 34
Score = 32.2 bits (73), Expect = 0.021
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 88 VCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCNN 121
VCGSD Y +PC + + H GPC+
Sbjct: 15 VCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDP 50
Score = 28.7 bits (64), Expect = 0.27
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKK 56
+CGSDGN YS+ C + + DL +
Sbjct: 15 VCGSDGNTYSNPCTLDCAKHEGKPDLVQ 42
Score = 25.2 bits (55), Expect = 5.9
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 141 PICGSDGNVYKTNCQMKLLTC 161
+CGSDGN Y C +
Sbjct: 14 RVCGSDGNTYSNPCTLDCAKH 34
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain,
cystine knot motif, TGF- fold, disulfide linked dimer,
follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens}
PDB: 2kcx_A
Length = 209
Score = 54.9 bits (131), Expect = 3e-09
Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 23/147 (15%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSK 188
C +C P +CGSDG Y+ C+++ C +S + R E
Sbjct: 86 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHP-DLSVMYRGRCRKSCEHVVCPRP 144
Query: 189 PTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDPICGTDNKT 248
+C D ++ ++ C + + +CG +N T
Sbjct: 145 QSCVVDQTGSAHCVVCRAAPC----------------------PVPSSPGQELCGNNNVT 182
Query: 249 YSNDCFLQMENCRSRSLVQKLYHGQCG 275
Y + C ++ C + + G C
Sbjct: 183 YISSCHMRQATCFLGRSIGVRHAGSCA 209
Score = 48.4 bits (114), Expect = 5e-07
Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 20/123 (16%)
Query: 17 CPVSCEGEKERI-ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTA 75
C C G R+ +CGSDG Y ECE+R C DL G CP
Sbjct: 86 CAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQ 145
Query: 76 LCNHQ-----------------CDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHL 116
C + +CG++N Y S C M++ C G I + H
Sbjct: 146 SCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHA 205
Query: 117 GPC 119
G C
Sbjct: 206 GSC 208
Score = 37.2 bits (85), Expect = 0.003
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTE 279
+CG+D TY ++C L+ CR + +Y G+C + E
Sbjct: 92 GLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCE 137
>1pce_A PEC-60; proteinase inhibitor(kazal type); NMR {Sus scrofa} SCOP:
g.68.1.1
Length = 60
Score = 50.2 bits (120), Expect = 6e-09
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C IYDP+CGTD TY ++C L + ++ +Q + G+C
Sbjct: 20 CSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 31.4 bits (71), Expect = 0.044
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 7/56 (12%)
Query: 71 CPTTALCNH-----QCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
+C H C + VCG+D Y+S C++ I++ G C
Sbjct: 5 FSRMPICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 30.2 bits (68), Expect = 0.11
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 179 CRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
C R+ P CG+DG Y + C++
Sbjct: 16 ESPDCSRIYDPVCGTDGVTYESECKLCLARI 46
Score = 29.1 bits (65), Expect = 0.29
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
+CG+DG Y SEC++ + ++ D++ GE
Sbjct: 27 VCGTDGVTYESECKLCLARIENKQDIQIVKDGE 59
>1cgj_I Pancreatic secretory trypsin inhibitor (kazal type) variant 4;
serine protease/inhibitor complex; 2.30A {Homo sapiens}
SCOP: g.68.1.1
Length = 56
Score = 49.9 bits (119), Expect = 8e-09
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 228 KGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CGTD TY N+C L EN + ++ + G C
Sbjct: 10 YNELNGCTLEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 31.4 bits (71), Expect = 0.033
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 177 RHCRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
+ C +P CG+DG+ Y N C + +N
Sbjct: 10 YNELNGCTLEYRPVCGTDGDTYPNECVLCFENR 42
Score = 31.0 bits (70), Expect = 0.043
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
+ C VCG+D Y + C + EN I + GPC
Sbjct: 12 ELNGCTLEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 28.7 bits (64), Expect = 0.32
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
+CG+DG+ Y +EC + N + + G
Sbjct: 23 VCGTDGDTYPNECVLCFENRKRQTSILIQKSGP 55
>1tgs_I Pancreatic secretory trypsin inhibitor (kazal type); complex
(proteinase/inhibitor); 1.80A {Sus scrofa} SCOP:
g.68.1.1 PDB: 1cgi_I 1hpt_A
Length = 56
Score = 49.9 bits (119), Expect = 9e-09
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 228 KGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP IY+P+CGTD TYSN+C L EN + ++ V G C
Sbjct: 10 TSEVSGCPKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 28.7 bits (64), Expect = 0.33
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 178 HCRESCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYV 215
C ++ P CG+DG YSN C + S+N + V
Sbjct: 11 SEVSGCPKIYNPVCGTDGITYSNECVLCSENKKRQTPV 48
Score = 27.6 bits (61), Expect = 0.77
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 81 CDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
C VCG+D Y + C + EN + + GPC
Sbjct: 16 CPKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 27.6 bits (61), Expect = 0.90
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
+CG+DG YS+EC + N + + G
Sbjct: 23 VCGTDGITYSNECVLCSENKKRQTPVLIQKSGP 55
>1y1b_A Elastase inhibitor; non-classical, kazal-type, protease inhibitor,
CSH motif, hydrolase inhibitor; NMR {Synthetic} PDB:
1y1c_A
Length = 48
Score = 49.5 bits (118), Expect = 1e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 230 CARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C IC YDP+CG+D TY N C L +CRS + ++ ++ G+C
Sbjct: 4 CPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 37.5 bits (87), Expect = 2e-04
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
C C + + VCGSD Y + C + +C IEL H G C
Sbjct: 4 CPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 33.3 bits (76), Expect = 0.006
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 178 HCRESCWRVSKPTCGSDGNIYSNACRMKSKNC--GKHVYVVPIKRC 221
C C P CGSDG Y NAC + +C + +V RC
Sbjct: 3 DCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 29.5 bits (66), Expect = 0.13
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 17 CPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
CP+ C + + + CGSDG Y + C + +C S+ ++ G
Sbjct: 4 CPLICTMQYDPV-CGSDGITYGNACMLLGASCRSDTPIELVHKGR 47
Score = 26.8 bits (59), Expect = 1.2
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 126 RENCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQG 164
+ +CP+ C P+CGSDG Y C + +C
Sbjct: 1 KPDCPLICT--MQYDPVCGSDGITYGNACMLLGASCRSD 37
>2jxd_A Serine protease inhibitor kazal-type 2; anti-parallel beta sheet,
beta-bulge, disulfide bond, alpha helix, pyrrolidone
carboxylic acid, secreted; NMR {Homo sapiens}
Length = 62
Score = 49.9 bits (119), Expect = 1e-08
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CP ++P+CG+D TY+N+C L M+ ++ + +G C
Sbjct: 22 CPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 31.8 bits (72), Expect = 0.031
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 77 CNHQCDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
C VCGSD Y + C + + G I++ GPC
Sbjct: 18 RLPGCPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 29.1 bits (65), Expect = 0.29
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNC 209
C R P CGSD + Y+N C + K
Sbjct: 22 CPRHFNPVCGSDMSTYANECTLCMKIR 48
Score = 26.8 bits (59), Expect = 1.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
+CGSD + Y++EC + M ++K G
Sbjct: 29 VCGSDMSTYANECTLCMKIREGGHNIKIIRNGP 61
>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal
type serine protease inhibitor comple hydrolase
inhibitor; 2.60A {Carcinoscorpius rotundicauda}
Length = 75
Score = 49.5 bits (118), Expect = 2e-08
Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDPIC 242
C KP CG++G +Y N C + + C +C YDP+C
Sbjct: 3 CPHTYKPVCGANGEVYDNECFLNKAGIEPAESWETCRGHEL------CPSVCTEEYDPVC 56
Query: 243 GTDNKTYSNDCFLQMENCR 261
+ K Y N C +
Sbjct: 57 -VEGKIYGNRCMQSHFCGK 74
Score = 41.1 bits (96), Expect = 2e-05
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEEPKNY 284
CP Y P+CG + + Y N+CFL + G P+ + Y
Sbjct: 3 CPHTYKPVCGANGEVYDNECFLNKAGIEPAES-WETCRGHELCPSVCTEEY 52
Score = 40.7 bits (95), Expect = 3e-05
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 141 PICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSKPTCGSDGNIYSN 200
P+CG++G VY C + S C+ C C P C +G IY N
Sbjct: 9 PVCGANGEVYDNECFLNKAGIEP---AESWETCRGHELCPSVCTEEYDPVC-VEGKIYGN 64
Query: 201 ACRMKSKNCG 210
C
Sbjct: 65 RCMQSHFCGK 74
Score = 32.2 bits (73), Expect = 0.026
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 15/81 (18%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGEKVVPVPLHHCPTTALCNHQCDDRREFV 88
+CG++G VY +EC + C LC C + + V
Sbjct: 10 VCGANGEVYDNECFLNKAGI--------------EPAESWETCRGHELCPSVCTEEYDPV 55
Query: 89 CGSDNKFYKSPCEMKRENCGV 109
C + K Y + C V
Sbjct: 56 C-VEGKIYGNRCMQSHFCGKV 75
>1r0r_I Ovomucoid, omtky3; high resolution, serine protease, protein
inhibitor, hydrolase; 1.10A {Meleagris gallopavo} SCOP:
g.68.1.1 PDB: 1sgr_I 2gkr_I 1cho_I 1omt_A 1omu_A 1ppf_I*
1tur_A 1tus_A 3sgb_I 2ovo_A 4ovo_A 1iy5_A 1cso_I 1ct4_I
2sgf_I 2gkt_I 2gkv_A 2nu0_I 1m8b_A 1m8c_A ...
Length = 51
Score = 47.6 bits (113), Expect = 5e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
C Y P+CG+DNKTY N C S + + G+C
Sbjct: 10 ACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 29.8 bits (67), Expect = 0.10
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 88 VCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
+CGSDNK Y + C + LSH G C
Sbjct: 18 LCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 29.1 bits (65), Expect = 0.23
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 176 TRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNCGKH 212
+ + + +C +P CGSD Y N C + +
Sbjct: 4 SEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESN 40
Score = 26.8 bits (59), Expect = 1.4
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
+CGSD Y ++C S L S G+
Sbjct: 18 LCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGK 50
>2erw_A Serine protease inhibitor infestin; kazal type domain, blood
clotting, hydrolase inhibitor; 1.40A {Triatoma
infestans} SCOP: g.68.1.1
Length = 56
Score = 47.6 bits (113), Expect = 6e-08
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 230 CARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQPTEE 280
C Y P+CG+D KTY N C L ++ ++ G+C + E
Sbjct: 4 NPCACFRNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVE 54
Score = 31.4 bits (71), Expect = 0.039
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 81 CDDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPCNN 121
C VCGSD K Y +PC + G++L H G C
Sbjct: 8 CFRNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQR 50
Score = 29.9 bits (67), Expect = 0.12
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRC 221
+C+R P CGSDG Y N C + K + +
Sbjct: 7 ACFRNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEG 46
Score = 26.8 bits (59), Expect = 1.4
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 17 CPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
P +C + CGSDG Y + C + LK G
Sbjct: 4 NPCACFRNYVPV-CGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGR 47
>1bus_A Proteinase inhibitor IIA; HET: PCA; NMR {Bos taurus} SCOP: g.68.1.1
PDB: 2bus_A*
Length = 57
Score = 47.1 bits (112), Expect = 7e-08
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 226 HFKGCARICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
FK C +P CG++ +TY N C +S + + G+C
Sbjct: 9 EFKDPKVYCTRESNPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 29.4 bits (66), Expect = 0.15
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 173 CQTTRHCRESCWRVSKPTCGSDGNIYSNACRMKSKNC 209
C + + C R S P CGS+G Y N C
Sbjct: 7 CAEFKDPKVYCTRESNPHCGSNGETYGNKCAFCKAVM 43
Score = 28.3 bits (63), Expect = 0.42
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 88 VCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
CGS+ + Y + C + G I L H G C
Sbjct: 24 HCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 25.2 bits (55), Expect = 5.4
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 29 ICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
CGS+G Y ++C S + G+
Sbjct: 24 HCGSNGETYGNKCAFCKAVMKSGGKINLKHRGK 56
>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal
domain, PROT complex, hormone-growth factor complex;
HET: 1PG; 2.00A {Rattus norvegicus}
Length = 152
Score = 49.9 bits (118), Expect = 8e-08
Identities = 31/149 (20%), Positives = 45/149 (30%), Gaps = 24/149 (16%)
Query: 128 NCPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVS 187
C +C GP+CG DG Y+ C + C +
Sbjct: 28 VCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQ------------PELEVQYQGKC 75
Query: 188 KPTCGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARICPTIYDPICGTDNK 247
K TC S+ C + N V I + +CG D
Sbjct: 76 KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPE------------PSSSEQSLCGNDGV 123
Query: 248 TYSNDCFLQMENCRSRSLVQKLYHGQCGQ 276
TYS+ C L+ C + Y G+C +
Sbjct: 124 TYSSACHLRKATCLLGRSIGLAYEGKCIK 152
Score = 48.4 bits (114), Expect = 3e-07
Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 18/136 (13%)
Query: 2 AFCMSQERNKNGAIACPVSCEGEKERIICGSDGNVYSSECEMRMLNCGSECDLKKSTCGE 61
C ++NK + P + +CG DG Y +EC + C + +L+ G+
Sbjct: 15 KKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGK 74
Query: 62 KVVPVPLHHCPTTALCNH----------------QCDDRREFVCGSDNKFYKSPCEMKRE 105
CP ++ C + + +CG+D Y S C +++
Sbjct: 75 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGNDGVTYSSACHLRKA 134
Query: 106 NC--GVGIELSHLGPC 119
C G I L++ G C
Sbjct: 135 TCLLGRSIGLAYEGKC 150
Score = 35.6 bits (81), Expect = 0.006
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCGQP 277
T P+CG D KTY N+C L C+ + ++ Y G+C +
Sbjct: 35 NITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKT 78
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose
octasulphate, hormone/growth factor complex; HET: SO4;
1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB:
1lr8_A* 1lr9_A
Length = 74
Score = 42.2 bits (99), Expect = 8e-06
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 230 CARICP--TIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQC 274
CA C T P+CG D KTY N+C L C+ + ++ Y G+C
Sbjct: 27 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC 73
Score = 34.9 bits (80), Expect = 0.003
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 77 CNHQC--DDRREFVCGSDNKFYKSPCEMKRENC--GVGIELSHLGPC 119
C C + VCG D K Y++ C + + C +E+ + G C
Sbjct: 27 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC 73
Score = 32.6 bits (74), Expect = 0.020
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 129 CPVNCDQAPLDGPICGSDGNVYKTNCQMKLLTCGQG 164
C +C GP+CG DG Y+ C + C +
Sbjct: 27 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQ 62
Score = 29.9 bits (67), Expect = 0.18
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 159 LTCGQGVVRVSKRHCQTTRHCRESCWRVS--KPTCGSDGNIYSNACRMKSKNC--GKHVY 214
+ CG G + + C C ++ P CG DG Y N C + C +
Sbjct: 7 VDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELE 66
Query: 215 VVPIKRC 221
V +C
Sbjct: 67 VQYQGKC 73
Score = 29.9 bits (67), Expect = 0.20
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 17 CPVSCEGEKER-IICGSDGNVYSSECEMRMLNC 48
C C + +CG DG Y +EC + C
Sbjct: 27 CAPDCSNITWKGPVCGLDGKTYRNECALLKARC 59
>1ldt_L LDTI, tryptase inhibitor; complex (hydrolase/inhibitor), hydrolase,
inflammation; 1.90A {Hirudo medicinalis} SCOP: g.68.1.1
PDB: 1an1_I 2kmo_A 2kmp_A 2kmq_A 2kmr_A
Length = 46
Score = 37.1 bits (86), Expect = 3e-04
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 233 ICPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQCG 275
CP I P+CG+D +TY+N C + V G C
Sbjct: 5 ACPKILKPVCGSDGRTYANSCIARCNG------VSIKSEGSCP 41
Score = 25.9 bits (57), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 183 CWRVSKPTCGSDGNIYSNACRMKSKN 208
C ++ KP CGSDG Y+N+C +
Sbjct: 6 CPKILKPVCGSDGRTYANSCIARCNG 31
Score = 24.4 bits (53), Expect = 9.9
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 88 VCGSDNKFYKSPCEMKRENCGVGIELSHLGPC 119
VCGSD + Y + C + G+ + G C
Sbjct: 13 VCGSDGRTYANSCIARCN----GVSIKSEGSC 40
>3pis_D Kazal-type serine protease inhibitor SPI-1; typical non-classical
kazal type inhibitor fold; 2.00A {Carcinoscorpius
rotundicauda}
Length = 42
Score = 32.8 bits (74), Expect = 0.009
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 234 CPTIYDPICGTDNKTYSNDCFL 255
CP Y P+CG + + Y N+CFL
Sbjct: 3 CPHTYKPVCGANGEVYDNECFL 24
Score = 27.0 bits (59), Expect = 0.93
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 182 SCWRVSKPTCGSDGNIYSNAC 202
SC KP CG++G +Y N C
Sbjct: 2 SCPHTYKPVCGANGEVYDNEC 22
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 34.8 bits (80), Expect = 0.027
Identities = 15/143 (10%), Positives = 27/143 (18%), Gaps = 6/143 (4%)
Query: 80 QCDDRREFVCGSDNKFYKSPCEMKRENCGVGIELSHLGPCNNISAHRENCPVNCDQAPLD 139
+ +R ++ +K+ G L + H
Sbjct: 247 PKESQRNLCLLKTSESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEEL 306
Query: 140 GPICGSDGNVYKTN------CQMKLLTCGQGVVRVSKRHCQTTRHCRESCWRVSKPTCGS 193
+ + CQ T Q K C S ++ G
Sbjct: 307 DIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGI 366
Query: 194 DGNIYSNACRMKSKNCGKHVYVV 216
G +V
Sbjct: 367 SGYTLRLCKMDNECTTKIKPRIV 389
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 33.4 bits (75), Expect = 0.052
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 70 HCPTTALCNHQCD-DRREFVCGSDNKFYKSPCEMKRENC-------GVGIELSHLGPCNN 121
C + E VC +DNK + S C C G + L ++GPC
Sbjct: 26 MCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKY 85
Query: 122 ISAHREN 128
I ++
Sbjct: 86 IPPCLDS 92
Score = 32.2 bits (72), Expect = 0.15
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Query: 238 YDPICGTDNKTYSNDCFLQMENCRSRSL-----VQKLYHGQCGQPTEEPKN 283
++ +C DNKT+ + C C + Y G C +
Sbjct: 42 FEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDS 92
Score = 29.9 bits (66), Expect = 0.72
Identities = 5/33 (15%), Positives = 9/33 (27%)
Query: 16 ACPVSCEGEKERIICGSDGNVYSSECEMRMLNC 48
+ +C +D + S C C
Sbjct: 32 PTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64
>3tjq_A Serine protease HTRA1; hydrolase; 2.00A {Homo sapiens}
Length = 140
Score = 28.8 bits (63), Expect = 1.1
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 191 CGSDGNIYSNACRMKSKNCGKHVYVVPIKRCLQGFHFKGCARI---CPTIYDPICGTDNK 247
C G AC ++ CG+ + V + A+ +P+CG+D
Sbjct: 47 CEVCGAPEGAACGLQEGPCGEGLQCVVPFGVPASATVRRRAQAGLCVCASSEPVCGSDAN 106
Query: 248 TYSNDCFLQMENCRSRSL----VQKLYHGQCG 275
TY+N C L+ + RS L V L G CG
Sbjct: 107 TYANLCQLRAASRRSERLHRPPVIVLQRGACG 138
Score = 27.6 bits (60), Expect = 2.9
Identities = 14/63 (22%), Positives = 23/63 (36%)
Query: 99 PCEMKRENCGVGIELSHLGPCNNISAHRENCPVNCDQAPLDGPICGSDGNVYKTNCQMKL 158
C ++ CG G++ + R P+CGSD N Y CQ++
Sbjct: 57 ACGLQEGPCGEGLQCVVPFGVPASATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRA 116
Query: 159 LTC 161
+
Sbjct: 117 ASR 119
>1h0z_A Serine protease inhibitor kazal-type 5, contains hemofiltrate
peptide HF6478, hemofiltrate...; serine proteinase
inhibitor; NMR {Homo sapiens} SCOP: g.68.1.2
Length = 68
Score = 26.3 bits (57), Expect = 3.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 182 SCWRVSKPTCGSDGNIYSNACRM 204
+C R + P G DG ++ N C M
Sbjct: 25 ACTRENDPIQGPDGKVHGNTCSM 47
Score = 26.0 bits (56), Expect = 4.7
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 234 CPTIYDPICGTDNKTYSNDCFLQMENCRSRSLVQKLYHGQ 273
C DPI G D K + N C + ++ +K G+
Sbjct: 26 CTRENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKKKKEGE 65
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 26.6 bits (58), Expect = 8.8
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 14/55 (25%)
Query: 6 SQERNKNGAIACPVSCEGEKERI---------ICGSDGNVYSSECEMRMLNCGSE 51
+ N N + CP C+ +I +C G V ++++ SE
Sbjct: 13 RRGPNLNIVLTCPE-CKVYPPKIVERFSEGDVVCALCGLV----LSDKLVDTRSE 62
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.137 0.465
Gapped
Lambda K H
0.267 0.0531 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,296,975
Number of extensions: 248159
Number of successful extensions: 764
Number of sequences better than 10.0: 1
Number of HSP's gapped: 653
Number of HSP's successfully gapped: 192
Length of query: 286
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 193
Effective length of database: 4,105,140
Effective search space: 792292020
Effective search space used: 792292020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.2 bits)