Query psy14251
Match_columns 76
No_of_seqs 6 out of 8
Neff 1.7
Searched_HMMs 13730
Date Fri Aug 16 23:13:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14251.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14251hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yzfa1 c.23.10.5 (A:1-195) Li 69.0 0.87 6.3E-05 26.2 1.2 44 29-72 129-172 (195)
2 d2fh5b1 c.37.1.8 (B:63-269) Si 56.3 4.6 0.00034 23.5 2.9 34 24-60 81-122 (207)
3 d1atla_ d.92.1.9 (A:) Snake ve 43.5 4.5 0.00033 24.4 1.4 35 26-60 68-103 (200)
4 d1nd1a_ d.92.1.9 (A:) Snake ve 43.4 5.6 0.00041 24.0 1.8 34 26-59 70-104 (202)
5 d1g7sa4 c.37.1.8 (A:1-227) Ini 43.3 1.6 0.00011 27.1 -0.9 22 40-64 119-140 (227)
6 d2gkea1 d.21.1.1 (A:1-130) Dia 41.6 6.1 0.00044 23.8 1.8 18 28-45 74-91 (130)
7 d1kufa_ d.92.1.9 (A:) Snake ve 38.0 8.8 0.00064 23.0 2.1 35 26-60 70-105 (201)
8 d1moza_ c.37.1.8 (A:) ADP-ribo 33.1 20 0.0014 20.2 3.1 17 46-62 118-134 (182)
9 d1bswa_ d.92.1.9 (A:) Snake ve 33.0 17 0.0012 21.3 2.8 36 25-60 66-102 (197)
10 d1svia_ c.37.1.8 (A:) Probable 32.7 11 0.00082 21.5 1.9 19 39-60 130-148 (195)
11 d2qn6a3 c.37.1.8 (A:2-206) Ini 31.7 8.4 0.00061 23.0 1.2 13 49-61 143-155 (205)
12 d2cxxa1 c.37.1.8 (A:2-185) GTP 25.5 19 0.0014 19.9 2.0 18 40-60 118-135 (184)
13 d1kaoa_ c.37.1.8 (A:) Rap2a {H 24.8 31 0.0023 19.0 2.9 36 27-62 86-124 (167)
14 d1r55a_ d.92.1.9 (A:) ADAM33 { 23.6 19 0.0014 21.3 1.8 33 26-60 67-101 (203)
15 d2jfga3 c.72.2.1 (A:94-297) UD 23.2 18 0.0013 20.8 1.6 17 36-54 3-19 (204)
16 d1nrjb_ c.37.1.8 (B:) Signal r 22.0 15 0.0011 20.6 1.1 18 42-62 110-127 (209)
17 d2i47a1 d.92.1.10 (A:220-473) 21.4 16 0.0012 22.3 1.2 17 44-60 110-126 (254)
18 d1zu1a2 g.37.1.4 (A:74-128) ds 20.1 11 0.00082 21.2 0.2 11 56-66 24-34 (55)
No 1
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=68.99 E-value=0.87 Score=26.25 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=33.4
Q ss_pred HHHHHhhhhhhhhcCCcceeeeeeeeecccccceEeccceeecc
Q psy14251 29 AALTDMGKYLFRERRLPVYDIAVAVTKKERSGMIWLSNQFHLTS 72 (76)
Q Consensus 29 ~AL~~Mg~YlyRE~RlP~YDiAia~T~lDmc~m~~~s~~~~~~~ 72 (76)
+.+.++.+-+-+|...||.|+.-.+.+..-....+.+|..|++.
T Consensus 129 ~~~~~~~~~~a~~~~v~~vd~~~~~~~~~~~~~~~~~DgiHpn~ 172 (195)
T d1yzfa1 129 KELVKVAQEVGAAHNLPVIDLYKAMTVYPGTDEFLQADGLHFSQ 172 (195)
T ss_dssp HHHHHHHHHHHHHTTCCEECHHHHHHHSTTGGGGBCTTSSSBCH
T ss_pred HHHHHHHHHHHHhhCCeEeehHHHHhccCCChhhcCCCCCCCCH
Confidence 44566677777888999999977777665556677789999874
No 2
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.26 E-value=4.6 Score=23.53 Aligned_cols=34 Identities=12% Similarity=0.281 Sum_probs=22.2
Q ss_pred hhchhHHHHHhhhhhhhh--------cCCcceeeeeeeeeccccc
Q psy14251 24 AIDSAAALTDMGKYLFRE--------RRLPVYDIAVAVTKKERSG 60 (76)
Q Consensus 24 ~iDa~~AL~~Mg~YlyRE--------~RlP~YDiAia~T~lDmc~ 60 (76)
+.|....+.+-.++++.. ++.| |.|+++|.|+++
T Consensus 81 ~~d~~~~~~~~~~~l~~~l~~~~~~~~~~p---ilvv~NK~Dl~~ 122 (207)
T d2fh5b1 81 SAAFQREVKDVAEFLYQVLIDSMALKNSPS---LLIACNKQDIAM 122 (207)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTSTTCCE---EEEEEECTTSTT
T ss_pred cccccccHHHHHHHHHHHHHhHHHhhcCCc---EEEEEECcccCC
Confidence 334455667777777654 2234 568899999986
No 3
>d1atla_ d.92.1.9 (A:) Snake venom metalloprotease {Western diamonback rattlesnake (Crotalus atrox), atrolysin C [TaxId: 8730]}
Probab=43.45 E-value=4.5 Score=24.36 Aligned_cols=35 Identities=17% Similarity=0.046 Sum_probs=26.1
Q ss_pred chhHHHHHhhhhhhhhcCC-cceeeeeeeeeccccc
Q psy14251 26 DSAAALTDMGKYLFRERRL-PVYDIAVAVTKKERSG 60 (76)
Q Consensus 26 Da~~AL~~Mg~YlyRE~Rl-P~YDiAia~T~lDmc~ 60 (76)
|+...|....+|..+...- .-+|+|+.+|..|+++
T Consensus 68 ~~~~~L~~F~~~~~~~~~~~~~~D~a~llt~~~~~~ 103 (200)
T d1atla_ 68 ASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDE 103 (200)
T ss_dssp SHHHHHHHHHHHHHHTHHHHSCCSEEEEEECSCCSS
T ss_pred cHHHHHHhhcceehhhcCCcccccceeeeeccccCC
Confidence 6777899998886554321 1579999999998775
No 4
>d1nd1a_ d.92.1.9 (A:) Snake venom metalloprotease {Terciopelo (Bothrops asper), bap1 [TaxId: 8722]}
Probab=43.45 E-value=5.6 Score=24.04 Aligned_cols=34 Identities=24% Similarity=0.148 Sum_probs=25.7
Q ss_pred chhHHHHHhhhhhhhhcCC-cceeeeeeeeecccc
Q psy14251 26 DSAAALTDMGKYLFRERRL-PVYDIAVAVTKKERS 59 (76)
Q Consensus 26 Da~~AL~~Mg~YlyRE~Rl-P~YDiAia~T~lDmc 59 (76)
++...|.+.++|..++..- .-+|+|+.+|..|..
T Consensus 70 ~~~~~L~~f~~~~~~~~~~~~~~D~a~l~t~~~~~ 104 (202)
T d1nd1a_ 70 DSSKTLKSFGEWRERDLLPRISHDHAQLLTAVVFD 104 (202)
T ss_dssp CHHHHHHHHHHHHHHTHHHHSCCSEEEEEECCCCG
T ss_pred cHHHHHHHhhhHHHhccCcccccchhhheeeccCC
Confidence 6788899999997665321 158999999988764
No 5
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=43.26 E-value=1.6 Score=27.08 Aligned_cols=22 Identities=32% Similarity=0.299 Sum_probs=16.7
Q ss_pred hhcCCcceeeeeeeeecccccceEe
Q psy14251 40 RERRLPVYDIAVAVTKKERSGMIWL 64 (76)
Q Consensus 40 RE~RlP~YDiAia~T~lDmc~m~~~ 64 (76)
++.+.| +.|+++|+|+++-...
T Consensus 119 ~~~~~p---~iivlNK~D~~~~~~~ 140 (227)
T d1g7sa4 119 RMYRTP---FVVAANKIDRIHGWRV 140 (227)
T ss_dssp HHTTCC---EEEEEECGGGSTTCCC
T ss_pred hcCCCe---EEEEEECccCCCchhh
Confidence 456778 5699999999886643
No 6
>d2gkea1 d.21.1.1 (A:1-130) Diaminopimelate epimerase {Haemophilus influenzae [TaxId: 727]}
Probab=41.60 E-value=6.1 Score=23.77 Aligned_cols=18 Identities=0% Similarity=-0.012 Sum_probs=15.1
Q ss_pred hHHHHHhhhhhhhhcCCc
Q psy14251 28 AAALTDMGKYLFRERRLP 45 (76)
Q Consensus 28 ~~AL~~Mg~YlyRE~RlP 45 (76)
--++||.++|++++...+
T Consensus 74 GNG~RCva~~l~~~~~~~ 91 (130)
T d2gkea1 74 GNGARCFARFVTLKGLTN 91 (130)
T ss_dssp HHHHHHHHHHHHHTTSCC
T ss_pred ccHHHHHHHHHHHcCCcc
Confidence 357999999999997765
No 7
>d1kufa_ d.92.1.9 (A:) Snake venom metalloprotease {Taiwan habu (Trimeresurus mucrosquamatus), atrolysin E [TaxId: 103944]}
Probab=38.03 E-value=8.8 Score=22.98 Aligned_cols=35 Identities=17% Similarity=0.040 Sum_probs=24.2
Q ss_pred chhHHHHHhhhhhhhhcC-Ccceeeeeeeeeccccc
Q psy14251 26 DSAAALTDMGKYLFRERR-LPVYDIAVAVTKKERSG 60 (76)
Q Consensus 26 Da~~AL~~Mg~YlyRE~R-lP~YDiAia~T~lDmc~ 60 (76)
++...|...++|-.+... ..-+|+|+.+|..|.|+
T Consensus 70 ~~~~~l~~f~~w~~~~~~~~~~~D~a~llt~~~~~~ 105 (201)
T d1kufa_ 70 DAPTTAGLFGDWRERVLLKKKNHDHAQLLTDTNFAR 105 (201)
T ss_dssp CHHHHHHHHHHHHHHTHHHHSCCSEEEEEECCCCGG
T ss_pred chHHHHHHhhhHHHhhccccccceeeEEEEeecCCC
Confidence 566778888776444311 12579999999998765
No 8
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=33.08 E-value=20 Score=20.15 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=13.2
Q ss_pred ceeeeeeeeecccccce
Q psy14251 46 VYDIAVAVTKKERSGMI 62 (76)
Q Consensus 46 ~YDiAia~T~lDmc~m~ 62 (76)
---|.|+.+|.|+++..
T Consensus 118 ~~piliv~NK~Dl~~~~ 134 (182)
T d1moza_ 118 DAALLVFANKQDQPGAL 134 (182)
T ss_dssp SCEEEEEEECTTSTTCC
T ss_pred CcceEEEEEeecccccc
Confidence 34578999999998753
No 9
>d1bswa_ d.92.1.9 (A:) Snake venom metalloprotease {Five-pace snake (Agkistrodon acutus), acutolysin A [TaxId: 36307]}
Probab=32.95 E-value=17 Score=21.30 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=26.2
Q ss_pred hchhHHHHHhhhhhhhhcCC-cceeeeeeeeeccccc
Q psy14251 25 IDSAAALTDMGKYLFRERRL-PVYDIAVAVTKKERSG 60 (76)
Q Consensus 25 iDa~~AL~~Mg~YlyRE~Rl-P~YDiAia~T~lDmc~ 60 (76)
-|+...|....+|..+..-- .-+|.|+.+|.-|.++
T Consensus 66 ~~~~~~L~~f~~~~~~~~~~~~~~d~~~l~t~~~~~~ 102 (197)
T d1bswa_ 66 ASAGNTLKSFGEWRAKDLIHRISHDNAQLLTATDFDG 102 (197)
T ss_dssp SCHHHHHHHHHHHHHHTGGGTSCCSEEEEEECCCCST
T ss_pred CCHHHHHHhhcchhhccccccccchhhheeeeecCCC
Confidence 47888899998886543211 2579999999988765
No 10
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=32.71 E-value=11 Score=21.54 Aligned_cols=19 Identities=21% Similarity=0.385 Sum_probs=15.0
Q ss_pred hhhcCCcceeeeeeeeeccccc
Q psy14251 39 FRERRLPVYDIAVAVTKKERSG 60 (76)
Q Consensus 39 yRE~RlP~YDiAia~T~lDmc~ 60 (76)
.++...| |.|++||.|+-+
T Consensus 130 l~~~~~p---iivv~NK~D~~~ 148 (195)
T d1svia_ 130 LKYYGIP---VIVIATKADKIP 148 (195)
T ss_dssp HHHTTCC---EEEEEECGGGSC
T ss_pred cccccCc---ceechhhccccC
Confidence 3567788 789999999854
No 11
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=31.74 E-value=8.4 Score=22.99 Aligned_cols=13 Identities=8% Similarity=0.115 Sum_probs=10.8
Q ss_pred eeeeeeecccccc
Q psy14251 49 IAVAVTKKERSGM 61 (76)
Q Consensus 49 iAia~T~lDmc~m 61 (76)
|.|+++|.|+++-
T Consensus 143 iIV~vNK~Dl~~~ 155 (205)
T d2qn6a3 143 LIIVQNKVDVVSK 155 (205)
T ss_dssp EEEEEECGGGSCH
T ss_pred eeeccccCCCccc
Confidence 4789999999864
No 12
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.49 E-value=19 Score=19.85 Aligned_cols=18 Identities=39% Similarity=0.521 Sum_probs=13.3
Q ss_pred hhcCCcceeeeeeeeeccccc
Q psy14251 40 RERRLPVYDIAVAVTKKERSG 60 (76)
Q Consensus 40 RE~RlP~YDiAia~T~lDmc~ 60 (76)
++...| +.|++||.|+..
T Consensus 118 ~~~~~p---~iiv~NK~D~~~ 135 (184)
T d2cxxa1 118 RELDIP---TIVAVNKLDKIK 135 (184)
T ss_dssp HHTTCC---EEEEEECGGGCS
T ss_pred HHcCCC---EEEEEeeeehhh
Confidence 456667 478899999863
No 13
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.78 E-value=31 Score=18.99 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=20.3
Q ss_pred hhHHHHHhhhhh---hhhcCCcceeeeeeeeecccccce
Q psy14251 27 SAAALTDMGKYL---FRERRLPVYDIAVAVTKKERSGMI 62 (76)
Q Consensus 27 a~~AL~~Mg~Yl---yRE~RlP~YDiAia~T~lDmc~m~ 62 (76)
...++..+-++. .+....|=.-|.|+.+|.|+....
T Consensus 86 ~~~s~~~~~~~~~~~~~~~~~~~~piilvgnK~Dl~~~~ 124 (167)
T d1kaoa_ 86 NQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESER 124 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTSCCCEEEEEECGGGGGGC
T ss_pred chhhhhhhhchhhhhhhhccCCCCCEEEEEEccchhhcc
Confidence 334455555543 333333322378899999997643
No 14
>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.60 E-value=19 Score=21.32 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=24.7
Q ss_pred chhHHHHHhhhhhhhhcCCc--ceeeeeeeeeccccc
Q psy14251 26 DSAAALTDMGKYLFRERRLP--VYDIAVAVTKKERSG 60 (76)
Q Consensus 26 Da~~AL~~Mg~YlyRE~RlP--~YDiAia~T~lDmc~ 60 (76)
|+...|....+|..+ -+| -+|+|+.+|..|.++
T Consensus 67 ~~~~~L~~f~~w~~~--~~~~~~~D~~~llt~~~~~~ 101 (203)
T d1r55a_ 67 DANATLWAFLQWRRG--LWAQRPHDSAQLLTGRAFQG 101 (203)
T ss_dssp CHHHHHHHHHHHHHH--HHHHSCCSEEEEEESCCCGG
T ss_pred cHHHHHHHHHHHHHh--hccCCCCCHhhhccccCCCC
Confidence 678888888887533 222 589999999988764
No 15
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=23.22 E-value=18 Score=20.79 Aligned_cols=17 Identities=24% Similarity=0.559 Sum_probs=13.3
Q ss_pred hhhhhhcCCcceeeeeeee
Q psy14251 36 KYLFRERRLPVYDIAVAVT 54 (76)
Q Consensus 36 ~YlyRE~RlP~YDiAia~T 54 (76)
+.|+|+.+-|+ |||+-|
T Consensus 3 ~lf~~~~~~~v--I~VTGT 19 (204)
T d2jfga3 3 ELFCREAQAPI--VAITGS 19 (204)
T ss_dssp HHHHHHCCSCE--EEEECS
T ss_pred HHHhhcCCCCE--EEEECC
Confidence 35889999998 677776
No 16
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.95 E-value=15 Score=20.63 Aligned_cols=18 Identities=22% Similarity=0.148 Sum_probs=13.9
Q ss_pred cCCcceeeeeeeeecccccce
Q psy14251 42 RRLPVYDIAVAVTKKERSGMI 62 (76)
Q Consensus 42 ~RlP~YDiAia~T~lDmc~m~ 62 (76)
+..| |.|+++|.|+++-.
T Consensus 110 ~~~p---iiiv~NK~D~~~~~ 127 (209)
T d1nrjb_ 110 NGID---ILIACNKSELFTAR 127 (209)
T ss_dssp TCCC---EEEEEECTTSTTCC
T ss_pred ccCC---eEEEEEeecccccC
Confidence 4566 77899999998743
No 17
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.42 E-value=16 Score=22.28 Aligned_cols=17 Identities=12% Similarity=-0.121 Sum_probs=14.3
Q ss_pred Ccceeeeeeeeeccccc
Q psy14251 44 LPVYDIAVAVTKKERSG 60 (76)
Q Consensus 44 lP~YDiAia~T~lDmc~ 60 (76)
.+-||+|+.+|..|+|+
T Consensus 110 ~~~~D~a~llT~~~~~~ 126 (254)
T d2i47a1 110 ASKVCLAHLFTYQDFDM 126 (254)
T ss_dssp HTTSSEEEEEECCCCGG
T ss_pred CCCccEEEEEecccccC
Confidence 35789999999999774
No 18
>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=20.11 E-value=11 Score=21.18 Aligned_cols=11 Identities=18% Similarity=0.054 Sum_probs=8.4
Q ss_pred cccccceEecc
Q psy14251 56 KERSGMIWLSN 66 (76)
Q Consensus 56 lDmc~m~~~s~ 66 (76)
.++|||+|-|-
T Consensus 24 C~lCn~~Fns~ 34 (55)
T d1zu1a2 24 CPVCNMTFSSP 34 (55)
T ss_dssp ETTTTEECSSH
T ss_pred hhhhhcccCCH
Confidence 47899998663
Done!