BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14254
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D287|SPF27_MOUSE Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=2 SV=1
Length = 225
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 155/200 (77%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
+AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++ D + FET+IM
Sbjct: 7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66
Query: 61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
R +FER+ R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126
Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
M ++G WK Y + LV+ + AQ +L +LRK IQ++NW+RK MQ+ G +L+++E++WV
Sbjct: 127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186
Query: 181 GLVSKNYEIEQACVLLEKKI 200
LVSKNYEIE+ V LE +I
Sbjct: 187 SLVSKNYEIERTIVQLENEI 206
>sp|O75934|SPF27_HUMAN Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1
Length = 225
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 155/200 (77%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
+AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++ D + FET+IM
Sbjct: 7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66
Query: 61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
R +FER+ R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67 RNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLEL 126
Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
M ++G WK Y + LV+ + AQ +L +LRK IQ++NW+RK MQ+ G +L+++E++WV
Sbjct: 127 MSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWV 186
Query: 181 GLVSKNYEIEQACVLLEKKI 200
LVSKNYEIE+ V LE +I
Sbjct: 187 SLVSKNYEIERTIVQLENEI 206
>sp|Q5RAX7|SPF27_PONAB Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1
Length = 226
Score = 236 bits (603), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 156/201 (77%), Gaps = 1/201 (0%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
+AGEV+VDALPY DQGY+ PGVREAA A+VEEETRRYRPTKNYL ++ D + FET+IM
Sbjct: 7 VAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSAFETDIM 66
Query: 61 RKDFERIQQRLPMEPLSMIRYKLPQPPTG-KMSDIAAWTECVENSMSQLEHQSTRIVNLQ 119
R +FER+ R P+E LSM RY+LP PP+G K +DI AW ECV NSM+QLEHQ+ RI NL+
Sbjct: 67 RNEFERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLE 126
Query: 120 LMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADW 179
LM ++G WK Y + LV+ + AQ +L +LRK IQ++NW+RK MQ+ G +L+++E++W
Sbjct: 127 LMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNW 186
Query: 180 VGLVSKNYEIEQACVLLEKKI 200
V LVSKNYEIE+ V LE +I
Sbjct: 187 VSLVSKNYEIERTIVQLENEI 207
>sp|Q5RKQ0|SPF27_DANRE Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1
Length = 225
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 151/200 (75%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
+AG+V VDALPY DQGYD GVREAA A+VEEETRRYRPTKNYL ++P D + FETEIM
Sbjct: 7 VAGDVFVDALPYFDQGYDATGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSAFETEIM 66
Query: 61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
R +FER+ R PME LSM RY+LP P +G+ +D+ AW +CV NSM+QLEHQ+ RI NL+L
Sbjct: 67 RNEFERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLEL 126
Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
M +YG WK L + +Q +L +RKEIQ++NW+RK Q+ GG +L++LE++WV
Sbjct: 127 MAQYGTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWV 186
Query: 181 GLVSKNYEIEQACVLLEKKI 200
LVSKNYEIE+A V LE ++
Sbjct: 187 SLVSKNYEIERAIVQLENEV 206
>sp|Q6PBE2|SPF27_XENTR Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2
SV=1
Length = 223
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 154/200 (77%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIM 60
+AG+V+VDALPY DQGYD GVREAA A+VEEETRRYRPTKNYL ++P D + FETEIM
Sbjct: 7 VAGDVVVDALPYFDQGYDAQGVREAAAALVEEETRRYRPTKNYLSYLPTPDYSAFETEIM 66
Query: 61 RKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQL 120
R +FER+ R P+E LSM RY+LP P +G+ +DI AW ECV NSM+QLEHQ+ RI NL+L
Sbjct: 67 RNEFERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLEL 126
Query: 121 MLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWV 180
M ++G WK Y + L++ + AQ L +LRK+IQ++NW+RK Q+ G +L+++E+ WV
Sbjct: 127 MSQHGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWV 186
Query: 181 GLVSKNYEIEQACVLLEKKI 200
LVSKNYEIE+A V +E ++
Sbjct: 187 SLVSKNYEIERAIVQMENEV 206
>sp|Q949S9|SPF27_ARATH Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana
GN=MOS4 PE=1 SV=1
Length = 253
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 116/212 (54%), Gaps = 3/212 (1%)
Query: 2 AGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRY-RPTKNYLEHIPPLDINKFET-EI 59
A ++DALPYID Y +P ++ +VEEE RR + ++L+ +PPL F+ +
Sbjct: 25 ANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSKKPADFLKDLPPLPKFDFKNCPV 84
Query: 60 MRKDFERIQQRLPMEPLSM-IRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNL 118
+ K++ER++ P + RYKL PP K +D AAW + ++ + L+ + + NL
Sbjct: 85 LGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAAWKQYLQKNQRSLQQKLIELENL 144
Query: 119 QLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKLEAD 178
+LM + GPE W++ L +++ Q + +EI+++N ERK Q +L L +
Sbjct: 145 ELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEKVNRERKYHQQTTSYELNALSQE 204
Query: 179 WVGLVSKNYEIEQACVLLEKKIQILQAEKAKR 210
W L KN EI+ AC +LE +I + E A+R
Sbjct: 205 WRQLCVKNMEIQSACAMLETQIDSFKKEAAER 236
>sp|Q54SG7|SPF27_DICDI Pre-mRNA-splicing factor spf27 OS=Dictyostelium discoideum GN=spf27
PE=3 SV=2
Length = 226
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 9/206 (4%)
Query: 1 MAGEVLVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLEHIPP-LDINKFETEI 59
+ G +D+LPY+D ++ +E ++ +E + P +YL +P +DI+ +
Sbjct: 5 IEGAENIDSLPYVDDSVNE-NEQELINKLISDEMSTFTPP-DYLAQLPSFIDIDYNNFQF 62
Query: 60 MRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMS----DIAAWTECVENSMSQLEHQSTRI 115
+ DF+R+++ M+ + RYK+ PT M + W + + N+ SQLEHQ R
Sbjct: 63 LENDFKRMEKEEKMKEFDIGRYKVE--PTTTMIKQQLNEKQWNDSLNNARSQLEHQDIRK 120
Query: 116 VNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQIKGGEQLKKL 175
+NL+L+ YG +WK YL L + +L Q +++I+EIN +RK+ Q + E++++
Sbjct: 121 INLELLQRYGGNSWKLYLSDLEILQKTLKKQLDQKKQQIEEINIQRKLSQEQTFEKIQQH 180
Query: 176 EADWVGLVSKNYEIEQACVLLEKKIQ 201
+ ++ LV KN EIE AC +E +I+
Sbjct: 181 DKKFLELVYKNTEIESACKSIELEIE 206
>sp|Q99PS0|K1C23_MOUSE Keratin, type I cytoskeletal 23 OS=Mus musculus GN=Krt23 PE=2 SV=1
Length = 422
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 84 PQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQA 143
P P G SDI + L+ Q +R L+ ML + LQ + +S
Sbjct: 277 PAPVQGNQSDIHELRRTFQALEIDLQAQHSRKTALENMLTETRARYSCRLQDMQQIISHY 336
Query: 144 QSKLIQLRKEIQEINWERKVM 164
+ +LIQLR++++ N E KV+
Sbjct: 337 EEELIQLRQDLERQNNEHKVL 357
>sp|B7ZRU9|EVI1A_XENLA MDS1 and EVI1 complex locus protein EVI1-A OS=Xenopus laevis
GN=mecom-a PE=1 SV=1
Length = 1055
Score = 33.9 bits (76), Expect = 0.85, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 66 RIQQRLPMEPLSMIRYKLPQPPTG-------KMSDIAAWTECVENSMSQLE 109
R+++R PM+PL +++ K +P G M D W +EN +LE
Sbjct: 643 RVEKRKPMDPLEILKEKYLRPSPGFLFHPQFPMPDQRTWMSAIENMAEKLE 693
>sp|Q54NG9|SCPDH_DICDI Probable saccharopine dehydrogenase [NADP(+), L-glutamate-forming]
OS=Dictyostelium discoideum GN=sdh PE=2 SV=1
Length = 480
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 116 VNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQE----INWERKVMQIKGGEQ 171
V+ +L +E G +W+ YL L+ C L + I+E + ER +Q
Sbjct: 277 VDARLAVE-GGISWRNYLVQLLGCNDNDSDLLYCVESTIKEYFEKLKTERDGLQFHFPII 335
Query: 172 LKKLEAD---------WVGLVS-------KNYEIEQACVLLEKKIQILQAEK 207
+ +E D W+GL+S KN I+ C LLEKK+ E+
Sbjct: 336 PRDIEKDVQHAVEGFKWLGLLSADEKVVNKNTPIDSLCALLEKKLSYKAGER 387
>sp|Q97P15|GALT1_STRPN Galactose-1-phosphate uridylyltransferase 1 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=galT1 PE=3 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 45 EHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIR 80
+HI P++ KFE+E KDFE + + P+S+IR
Sbjct: 271 KHIFPMEKAKFESEFCFKDFEDVNAGIVKWPMSVIR 306
>sp|Q8DNL8|GALT1_STRR6 Galactose-1-phosphate uridylyltransferase 1 OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=galT1 PE=3 SV=1
Length = 491
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 45 EHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIR 80
+HI P++ KFE+E KDFE + + P+S+IR
Sbjct: 271 KHIFPMEKAKFESEFRFKDFEDVNAGIVKWPMSVIR 306
>sp|O14233|RNA14_SCHPO mRNA 3'-end-processing protein rna14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rna14 PE=3 SV=1
Length = 733
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 68 QQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLM--LEYG 125
++RLP + + +R K+ + P +DI++W VE S+ +H+ R Q++ Y
Sbjct: 49 RKRLPNDLVGQLRDKIQENP----NDISSWYALVEEYGSKGKHEELRETYEQMLRPFPYV 104
Query: 126 PETWKEYLQT 135
P W +Y+ +
Sbjct: 105 PRVWVDYISS 114
>sp|Q16KN5|RETM_AEDAE Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1
Length = 646
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 131 EYLQTLVNCVSQAQ-SKLIQLRKEIQEINWERKVMQIKGGEQLKKLEADWVGLVSKNYEI 189
+Y+ T + +S Q SKL+Q RK+I+E N E KV + L+ L A +++ I
Sbjct: 216 DYIATYLGQLSPLQESKLVQFRKKIEETNHEGKVPDYQ--TLLRFLRA-------RDFSI 266
Query: 190 EQACVLLEKKIQ 201
E+A +L++ +Q
Sbjct: 267 EKAASMLQESLQ 278
>sp|Q9K6K1|RBSK_BACHD Ribokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=rbsK PE=3 SV=1
Length = 294
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 26 ALAMVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLS-------- 77
A ++ + R TK EH+ P + FE E+ D +Q +P+E ++
Sbjct: 97 ATILLSDRDNRIIVTKGANEHVTPDYVAAFEQELAASDVVLLQLEIPLETVAYVLEFCAK 156
Query: 78 -MIRYKLPQPPTGKMSDIAAWTEC 100
+ L P K+ D AAWT+
Sbjct: 157 HHVTTVLNPAPAQKLPD-AAWTDA 179
>sp|Q9CQ33|LZTR1_MOUSE Leucine-zipper-like transcriptional regulator 1 OS=Mus musculus
GN=Lztr1 PE=2 SV=2
Length = 837
Score = 31.2 bits (69), Expect = 5.2, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 55 FETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTR 114
F IM K+FER+ L +E + + P+ P+ + DI T +++ + LE +
Sbjct: 605 FNQVIMMKEFERLSSPLIVEIVRRKQQPPPRTPSDQPVDIG--TSLIQDMKAYLEGAGSE 662
Query: 115 IVNLQLMLEYGP 126
++ L+L+ P
Sbjct: 663 FCDITLLLDGQP 674
>sp|Q28628|AKAP9_RABIT A-kinase anchor protein 9 (Fragment) OS=Oryctolagus cuniculus
GN=AKAP9 PE=2 SV=2
Length = 1087
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 58 EIMRKDFERIQQRLP--MEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQ----LEHQ 111
E + D ER+++ +E L+ + KL Q ++++I T +S+S+ L+HQ
Sbjct: 349 ECLMSDQERVRKNREEEIEQLNEVIEKLQQ----ELANIDQKTSVDPSSLSEEADSLKHQ 404
Query: 112 STRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLRKEIQEINWERKVMQ 165
+++ +L LE+ ET E + N + + K+ QL +E+ + ER+ M+
Sbjct: 405 LDKVIAEKLALEHQVETTNEEMAVTKNVLKETNFKMNQLTQELCSLKREREKME 458
>sp|Q5R4Q7|LZTR1_PONAB Leucine-zipper-like transcriptional regulator 1 OS=Pongo abelii
GN=LZTR1 PE=2 SV=1
Length = 840
Score = 30.4 bits (67), Expect = 8.5, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 55 FETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTR 114
F IM K+FER+ L +E + + P+ P+ + DI T +++ + LE
Sbjct: 608 FNQVIMMKEFERLSSPLIVEIVRRKQQPPPRTPSDQPVDIG--TSLIQDMKAYLEGAGAE 665
Query: 115 IVNLQLMLEYGP 126
++ L+L+ P
Sbjct: 666 FCDITLLLDGHP 677
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,541,434
Number of Sequences: 539616
Number of extensions: 2999399
Number of successful extensions: 10749
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 10685
Number of HSP's gapped (non-prelim): 128
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)