BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14256
(1046 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/511 (48%), Positives = 341/511 (66%), Gaps = 11/511 (2%)
Query: 105 TRRHIKYALGVGSVIGGTGILLHRNNY-DVNSLVAVRLVRAASCVFNIAYIYKKALYQKA 163
R+ +K A + +GI + N Y D N AVR+ RA + I+Y Y +L K+
Sbjct: 2 ARKALKLASWTSMALAASGIYFYSNKYLDPNDFGAVRVGRAVATTAVISYDYLTSL--KS 59
Query: 164 TPDPTSEEYSNLKSK-------VHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEY 216
P SEEY L+SK VH +A +L ELC N+G +IKVGQH+GAL+YLLP+EY
Sbjct: 60 VP-YGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEY 118
Query: 217 VETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGS 276
T+KVLHS+AP S M++I V++EDLGK+ ++F S + P+G ASLAQVHKA LHDG
Sbjct: 119 TSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGR 178
Query: 277 TIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEAS 336
T+A+KVQH VR ++ DI ME LV V +FPEF+F+WLVDE K+N+P EL+FL E
Sbjct: 179 TVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGR 238
Query: 337 NITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKL 396
N KV++M HF +LK+P+IH DL T RVL M+F++GGQ+ND DY+ N I+V E+S L
Sbjct: 239 NAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHL 298
Query: 397 GKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWL 456
GK+YSEMIF +GFVH DPHPGN+LVR+ + AE++LLDHGLY LT++FR Y LW
Sbjct: 299 GKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQ 358
Query: 457 SILNKDKVAMKEHCTKLGVGDMYGLFACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVP 516
S++ D +KE+ +LG GD+Y LFACM++ RSWD++ GI + T +E + +
Sbjct: 359 SLIWTDMKRVKEYSQRLGAGDLYPLFACMLTARSWDSVNRGISQAPVTATEDLEIRNNAA 418
Query: 517 NLIPEISDILTRVNRQVLLILKTNDLIRGIEHTLKTHARRVSLLVMSRCCIRSVYSEEYS 576
N +P+IS +L V RQ+LLILKTNDL+RGIE L T A S L MSRCCIR++ +
Sbjct: 419 NYLPQISHLLNHVPRQMLLILKTNDLLRGIEAALGTRASASSFLNMSRCCIRALAEHKKK 478
Query: 577 HAHSHLKKCVLLISEKWQLFKLSMYYFYLGI 607
+ S ++ + SE + L++++++ L +
Sbjct: 479 NTCSFFRRTQISFSEAFNLWQINLHELILRV 509
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/498 (47%), Positives = 339/498 (68%), Gaps = 4/498 (0%)
Query: 105 TRRHIKYALGVGSVIGGTGILLHRNNY-DVNSLVAVRLVRAASCVFNIAYIYKKALYQKA 163
R+ +K A + +G+ L+ NNY D N AVR+ RA + I+Y Y +L ++
Sbjct: 2 ARKALKLASWTSVALAASGVYLYSNNYLDPNDFGAVRVGRAVATTAVISYDYLTSL--RS 59
Query: 164 TPDPTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVL 223
P SEEY +S+VH +A +L ELC N+G +IKVGQH+GAL+YLLP+EY T+KVL
Sbjct: 60 VP-YGSEEYLQRRSQVHLRSARRLFELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVL 118
Query: 224 HSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQ 283
HS+AP S M+++ V++EDLGK+ ++F S + P+GAASLAQVHKA LHDG T+A+KVQ
Sbjct: 119 HSQAPQSSMQEVRQVIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQ 178
Query: 284 HRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTK 343
H V+ ++ DI ME LV V +FP+F+F+WLVDE K+N+P EL+FL E N KV
Sbjct: 179 HPKVQAQSSKDILLMEVLVLAVKQLFPDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAH 238
Query: 344 MFAHFPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEM 403
M HF +LK+PQIH +L T RVL M+F+EGGQ+ND Y+ +N I+V E+S LGK+YSEM
Sbjct: 239 MLRHFDFLKVPQIHWELSTKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEM 298
Query: 404 IFNSGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDK 463
IF +GFVH DPHPGN+LVR+ + AE++LLDHGLY LT++FR +Y LW S++ D
Sbjct: 299 IFVNGFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFRLDYCHLWQSLIWTDM 358
Query: 464 VAMKEHCTKLGVGDMYGLFACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVPNLIPEIS 523
+K++ +LG D+Y LFACM++ RSWD+++ GI + + +E + + +PEIS
Sbjct: 359 DGLKQYSQRLGAADLYPLFACMLTARSWDSVKQGIGQAPVSATEDSEIRNNAACYLPEIS 418
Query: 524 DILTRVNRQVLLILKTNDLIRGIEHTLKTHARRVSLLVMSRCCIRSVYSEEYSHAHSHLK 583
+L V RQ+LLILKTNDL+R IE TL T + S L MSRCCIR++ + A S +
Sbjct: 419 QLLNHVPRQMLLILKTNDLLRSIETTLGTRSSASSFLNMSRCCIRALAEHKKRDAGSFFR 478
Query: 584 KCVLLISEKWQLFKLSMY 601
+ + SE + L++++++
Sbjct: 479 RTQISFSEAFSLWQINLH 496
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/484 (48%), Positives = 337/484 (69%), Gaps = 4/484 (0%)
Query: 123 GILLHRNNY-DVNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHK 181
GI L+ N + D N VR+ RA + I Y Y +L + P SEEY LKS+VH
Sbjct: 17 GIYLYGNKFMDPNDFGVVRVGRAIATTAVITYDYLTSL--RNVP-YGSEEYDFLKSQVHL 73
Query: 182 EAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKE 241
+AE+L ELC N+G +IKVGQH+GAL+YLLP+EY T+KVLHS+AP S ++I V++E
Sbjct: 74 RSAERLRELCCANRGTFIKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEIEQVIRE 133
Query: 242 DLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEAL 301
DLGK+ E+F S E P+GAASLAQVHKA L DG T+A+K+QH V+ ++ DI ME L
Sbjct: 134 DLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVL 193
Query: 302 VHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLC 361
+ VV +FP+F+F+WLV+E K+N+P EL+FL E N KV +M +F +LK+P+I+ +L
Sbjct: 194 LLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQMLKNFEFLKVPRIYWELS 253
Query: 362 TSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILV 421
T RVL M+FMEGGQ+ND Y+ +N I+V E+S LGKLYSEMIF +GFVH DPHPGN+LV
Sbjct: 254 TRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVLV 313
Query: 422 RRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYGL 481
++ S A +ILLDHGLY L++ FR +Y +LWL+++ D ++++ +LG GD+Y L
Sbjct: 314 KKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKADMKRVQKYSRRLGAGDLYPL 373
Query: 482 FACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLLILKTND 541
FACM++ RSW+++ GI+++ + SE + + +P+I+ +L V RQ+LL+LKTND
Sbjct: 374 FACMLTARSWESVNRGIDQSPVSASEDVEIRSNAAAYLPQITQLLNNVPRQMLLLLKTND 433
Query: 542 LIRGIEHTLKTHARRVSLLVMSRCCIRSVYSEEYSHAHSHLKKCVLLISEKWQLFKLSMY 601
L+RGIE L T A S L MSRCCIR+V + + S +HS ++ + ++E L+++++Y
Sbjct: 434 LLRGIESALHTRASASSFLNMSRCCIRAVSTYQRSKSHSLYRRVHISLTEALSLWQINLY 493
Query: 602 YFYL 605
+L
Sbjct: 494 ELFL 497
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/480 (45%), Positives = 319/480 (66%), Gaps = 4/480 (0%)
Query: 123 GILLHRNNY-DVNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHK 181
G L+ Y D + VR+ RA I + Y L + +EEY N+KS+VH
Sbjct: 20 GFFLYGTGYWDPSDFGVVRIGRAVLTTAAITWDYFTKLRH---VEAGTEEYENIKSQVHL 76
Query: 182 EAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKE 241
+A +LL+LC N+G +IKVGQH+ ALEYL+P EY +T+ VLHS+AP +P D++ V++E
Sbjct: 77 RSAHRLLDLCCFNRGTFIKVGQHLAALEYLVPPEYTKTLSVLHSQAPCTPFTDVVQVIRE 136
Query: 242 DLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEAL 301
DLGK+ SE+F E P+GAASLAQVH+A L DG +A+KVQH V+ ++ DI ME L
Sbjct: 137 DLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILIMEVL 196
Query: 302 VHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLC 361
+HVV +FP+F+F+WL++E K+N+P EL+F E N K++ + + F +L+IP+I+ +L
Sbjct: 197 LHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIPRIYWELS 256
Query: 362 TSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILV 421
T RVL M++MEGGQ+ND +Y+ N I+V +VS LGKLYSEMIF GFVH DPHPGN+LV
Sbjct: 257 TKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHPGNVLV 316
Query: 422 RRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYGL 481
R+ + + E+ILLDHGLY LT+ FR +Y LW +++ DK ++ + +LG G++Y L
Sbjct: 317 RQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAADKERIRIYSQRLGAGELYPL 376
Query: 482 FACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLLILKTND 541
FACM++ RSW+++ GI + ++ E + + +PEIS +L V RQ+LL+LKTND
Sbjct: 377 FACMLTARSWESVNRGIYENTVSKEEIHEIRSNAATYLPEISQLLASVPRQMLLLLKTND 436
Query: 542 LIRGIEHTLKTHARRVSLLVMSRCCIRSVYSEEYSHAHSHLKKCVLLISEKWQLFKLSMY 601
L+RGIE +L TH+ + MSRCC+R++ A S + +SE + L +L MY
Sbjct: 437 LLRGIETSLGTHSSSSAFFYMSRCCVRALARHRKEKADSLWSYIHISLSETFCLGQLQMY 496
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/490 (44%), Positives = 319/490 (65%), Gaps = 9/490 (1%)
Query: 116 GSVIGGTGILLHRNNYDVNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNL 175
G + GTG ++D + VR+ RA V A I L + +EEY ++
Sbjct: 20 GFFLYGTG------HWDPSDFGVVRIGRA---VLTTAAITWDYLTELRHVKAGTEEYESI 70
Query: 176 KSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDI 235
KS+VH +A +LL+LC N+G +IKVGQH+GALEYL+P EY +T+ VLHS+AP +P D+
Sbjct: 71 KSQVHFRSAHRLLDLCCANRGTFIKVGQHLGALEYLVPPEYTKTLSVLHSQAPCTPFPDV 130
Query: 236 LAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDI 295
+ V++EDLGK+ SE+F E P+GAASLAQVH+A L DG +A+KVQH V+ + DI
Sbjct: 131 VQVIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDI 190
Query: 296 KCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQ 355
ME L+H V +FP+F+F+WL++E K+N+P EL+F E N K++ + + F +L+IP+
Sbjct: 191 LLMEVLLHAVKKIFPQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFSFLRIPR 250
Query: 356 IHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPH 415
I+ +L T RVL M++MEGGQ+ND +Y+ N I++ +V+ LG+LYSEMIF GFVH DPH
Sbjct: 251 IYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPH 310
Query: 416 PGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGV 475
PGN+LVR+ + E+ILLDHGLY LT+ FR +Y LW +++ D ++ + +LG
Sbjct: 311 PGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAADMQQIRIYSQRLGA 370
Query: 476 GDMYGLFACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLL 535
G++Y LFACM++ RSW+++ GI + + E + + +PEIS +L V RQ+LL
Sbjct: 371 GELYPLFACMLTARSWESVNQGIYQNTVSREEALEIRSNAATYLPEISQLLASVPRQMLL 430
Query: 536 ILKTNDLIRGIEHTLKTHARRVSLLVMSRCCIRSVYSEEYSHAHSHLKKCVLLISEKWQL 595
+LKTNDL+RGIE +L THA S L MSRCC+R++ S + ++E + L
Sbjct: 431 LLKTNDLLRGIETSLGTHASSSSFLNMSRCCVRALARHRKEKTDSLWSYIHISLAETFSL 490
Query: 596 FKLSMYYFYL 605
+L +Y L
Sbjct: 491 GQLQIYEIVL 500
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 307 bits (787), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 286/495 (57%), Gaps = 27/495 (5%)
Query: 113 LGVGSVI-GGTGILLHRNNYDVNSL------VAVRLVRAASCVFNIAYIYKKALYQKATP 165
L VG+ + GG+G ++ D ++ + VRL R +IA+ Y+ +L A
Sbjct: 14 LVVGTALCGGSGAAFIASSDDPSTTLKLCTSIPVRLYRNTVTAASIAFDYEYSLLGLAE- 72
Query: 166 DPTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMK-VLH 224
S E + +K +VH +A++L ELC N G+YIK+GQHIG LEYL+P+EYV TM+ +
Sbjct: 73 --GSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESML 130
Query: 225 SKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQH 284
+K P+S + + V K+++G+ P ++FA +P P+ +ASLAQVH A HDG +A+KVQH
Sbjct: 131 NKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQH 190
Query: 285 RNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKM 344
++ D A D + LV+ + +FP F + WL+DE ++PKEL+FL EA N K
Sbjct: 191 AHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDN 250
Query: 345 FAHFP-----WLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKL 399
F ++ P I+ +L TS++L M+FM+G Q+NDVD I + I YEVS + +
Sbjct: 251 FRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQPYEVSKLVSQT 310
Query: 400 YSEMIFNSGFVHSDPHPGNILVRRAQSS-------NSAELILLDHGLYASLTDDFRTEYA 452
++EM+F GFVH DPH N++VR S +L++LDHGLY L + R YA
Sbjct: 311 FAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFNTRFNYA 370
Query: 453 KLWLSILNKDKVAMKEHCTKLGVG-DMYGLFACMVSGRSW-DAIEAGIEKTKFTESEKEV 510
LW +++ D A+KEH KLG G D+Y LFA +++ R W I+ ++ ++++V
Sbjct: 371 SLWKALVFSDAKAIKEHSEKLGAGDDLYVLFAGILTMRPWKQVIDTSVDHLVIQGNKEDV 430
Query: 511 --FQRDVPNLIPEISDILTRVNRQVLLILKTNDLIRGIEHTLKTHARRVSLLVMSRCCIR 568
Q EIS++L R+ R +LL+LKTND +R + + L + S L++ + +
Sbjct: 431 SELQMYASQYFSEISELLRRLPRVILLMLKTNDCLRSVNNELMQGSSLESFLIIGKVSSQ 490
Query: 569 SVYSEEYSHAHSHLK 583
+V + + S +K
Sbjct: 491 AVLEAKRAEKKSLMK 505
>sp|O60111|YG62_SCHPO ABC1 family protein C15C4.02 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC15C4.02 PE=3 SV=2
Length = 557
Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 264/454 (58%), Gaps = 20/454 (4%)
Query: 133 VNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHKEAAEQLLELCK 192
V+S A R+V A F+ YKK L + + EE S+ H AE+ L++ +
Sbjct: 66 VSSKRAYRVVLAGFLCFSD---YKKVL---GSSYASEEERQLALSECHLRCAERSLKVFE 119
Query: 193 MNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFA 252
N G+YIK+GQH+ A+ Y++PKE+ TM L + P + +KDI + + D GK E F
Sbjct: 120 ENGGIYIKIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLKDIDHLFRVDTGKGLDETFD 179
Query: 253 SIEPNPMGAASLAQVHKATLHDGST-IALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE 311
+P +G ASLAQVHKA L D +A+KVQH +V N+ +D+ + + FP+
Sbjct: 180 EFDPIALGVASLAQVHKARLKDSDVWVAVKVQHPSVSLNSPLDLSMTRWVFKAIKTFFPD 239
Query: 312 FKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPW-LKIPQIHPDLCTSRVLAMDF 370
FK +WL DE +R++P+EL+F EA N + + FAH L +P++ R+L M++
Sbjct: 240 FKLMWLADEIERSLPQELDFTREAKNSIETKEHFAHLSTSLYVPEVM--WSKPRILVMEY 297
Query: 371 MEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFN-SGFVHSDPHPGNILVR----RAQ 425
+ G +I+++ ++ E++I+ VS + +++EMIF G +H DPH GN+L+R ++
Sbjct: 298 VAGARIDNLSFMDEHSISRDLVSVDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSK 357
Query: 426 SSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLG-VGDM-YGLFA 483
S + E++LLDHGLY + + + +YA +WL+I+N ++ +K + K+ V D + +FA
Sbjct: 358 SPRNYEIVLLDHGLYRDIPHELQVDYANMWLNIINFNEKNLKFYAKKVANVSDENFPIFA 417
Query: 484 CMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVP--NLIPEISDILTRVNRQVLLILKTND 541
++GR + ++++ E E++ F + ++ I +L+ + R LL++KTND
Sbjct: 418 TAITGRPYKSLKSLPIGGPNHEEEQKKFISALQKGGMLQSIIRLLSTMPRLTLLLMKTND 477
Query: 542 LIRGIEHTLKTHARRVSL-LVMSRCCIRSVYSEE 574
L+R ++ LKT + L L+M+R C+R VY ++
Sbjct: 478 LVRSLDENLKTKSGPEKLYLIMARYCLRCVYDDK 511
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 259 bits (662), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 234/400 (58%), Gaps = 7/400 (1%)
Query: 166 DPTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHS 225
+ S +Y + S H+ AA+ L+ N G+Y+K+GQ + + +LLP EY++T++VL
Sbjct: 113 EENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKLGQGLCSFNHLLPTEYIQTLRVLED 172
Query: 226 KAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHR 285
KA +++ + ED P+E+F + PM AASLAQVH+A LHDG+ +A+KVQ+
Sbjct: 173 KALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDGTDVAVKVQYI 232
Query: 286 NVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMF 345
++RD + D++ +E L+ +V + P F F W++ + K + +EL+F E N + +
Sbjct: 233 DLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEGRNAERCAQEL 292
Query: 346 AHFPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIF 405
HF ++ IP++H D + RVL DF G ++ND++ I + V +V+ KL + ++E IF
Sbjct: 293 KHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTFAEQIF 352
Query: 406 NSGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVA 465
++GF+HSDPHPGN+LVR+ AEL+LLDHGLY L + R+ +LW +I+ +D A
Sbjct: 353 HTGFIHSDPHPGNVLVRKG-PDGKAELVLLDHGLYQFLDEKDRSSLCQLWRAIILRDNAA 411
Query: 466 MKEHCTKLGVGDMYGLFACMVSGRSWDAIEAG-IEKTKFTESEKEVFQRDVPN-LIPEIS 523
MK+H LGV D Y LF+ ++ R + G + + E+ + +D+ I
Sbjct: 412 MKKHAAALGVQD-YMLFSEVLMQRP---VRLGQLWGSHLISREEAAYMQDMAREHFDGIM 467
Query: 524 DILTRVNRQVLLILKTNDLIRGIEHTLKTHARRVSLLVMS 563
++L + R +LL+L+ + +R I L T R L+ S
Sbjct: 468 EVLKALPRPMLLVLRNINTVRAINSNLGTPVDRYFLMAKS 507
>sp|Q06567|YL253_YEAST ABC1 family protein YLR253W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YLR253W PE=1 SV=1
Length = 569
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 271/518 (52%), Gaps = 35/518 (6%)
Query: 112 ALGVGSVIGGTGILLHRNNYDVNS-----LVAVRLVRAASCVFNIAYIYKKALYQKATPD 166
+L VG I +L + N+ +S L R+ Y YK+AL K+ +
Sbjct: 35 SLLVGGTIASAVVLYNFNDTFHDSVKHTALTTKRIAVVTQATTRCFYHYKRAL-NKSYEN 93
Query: 167 PTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSK 226
E + +K HK A L + N G+YIK+GQHIGA+ YLLPKE+ +TM L
Sbjct: 94 KKEREVA--LNKCHKMCALITLHALRSNGGIYIKLGQHIGAMTYLLPKEWTDTMIPLQDH 151
Query: 227 APMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHD----GSTIALKV 282
P S ++I + KEDLG ++F P+G ASLAQVH A L + GS++A+K
Sbjct: 152 CPESTYEEIDELFKEDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAVKC 211
Query: 283 QHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVT 342
QH ++++ +D+ + ++ FP++ WL DE + +I ELNF +EA N K
Sbjct: 212 QHPSLKEFIPLDVMLTRTVFELLDVFFPDYPLTWLGDELQSSIYVELNFTKEAENAEKTR 271
Query: 343 KMFAHF---PWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKL 399
F+ F LKIP++ R+L M+++ G +++D++YI + I+ EVS L +
Sbjct: 272 HYFSKFKKQTALKIPKVIES--HKRILIMEYVGGKRLDDLEYIDSHGISRSEVSSCLSHI 329
Query: 400 YSEMIF--NSGFVHSDPHPGNILVRRAQSS-----NSAELILLDHGLYASLTDDFRTEYA 452
++ MIF N G +H DPH GN+ +R + + ++ E++L DHGLY + R YA
Sbjct: 330 FNNMIFTPNVG-IHCDPHGGNLAIRSVKPAKDNGYHNFEIVLFDHGLYRYPSTRTRRLYA 388
Query: 453 KLWLSIL-NKDKVAMKEHCTKLG--VGDMYGLFACMVSGRSWDAIEAGIEKTKFTESEKE 509
K WLS+L +KD+ MK++ + + L A ++GRS DA T T+ E +
Sbjct: 389 KFWLSLLFDKDQTKMKKYAKGFANITDEQFPLLAAAITGRSIDAALNYDISTSRTQEEMD 448
Query: 510 VFQRDV--PNLIPEISDILTRVNRQVLLILKTNDLIRGIEHTLKTH-ARRVSLLVMSRCC 566
V + L+ ++ IL+R+ R VLLILKTNDL R ++ L+ + L+M++ C
Sbjct: 449 VMANGILEGTLLSDLMSILSRIPRVVLLILKTNDLTRHLDECLQNPLGPERTFLIMTQYC 508
Query: 567 IRSVYSEEYSHAHSHLKKCVLLISEKWQLFKLSMYYFY 604
++VY E+ +S + S KW L+ + Y
Sbjct: 509 AKTVYDEKVERINSEYARW----SIKWMWENLTNWIVY 542
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 228/399 (57%), Gaps = 17/399 (4%)
Query: 169 SEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAP 228
S Y + S H+ AA+ L+ N G+Y+K+GQ + + +LLP EY T++VL +A
Sbjct: 116 SPGYLEVMSACHQRAADALVAGAISNGGLYVKLGQGLCSFNHLLPPEYTRTLRVLEDRAL 175
Query: 229 MSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVR 288
+++ + ED P E+F + P+ AASLAQVH+A LHDG+++A+KVQ+ ++R
Sbjct: 176 KRGFQEVDELFLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLR 235
Query: 289 DNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHF 348
D + DI +E L+ +V + P F F W++ + K + +EL+F E N + + AHF
Sbjct: 236 DRFDGDIHTLELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNAERCARELAHF 295
Query: 349 PWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSG 408
P++ +P++H D + RVL DF G ++NDV+ I + V+++++KL K ++E IF +G
Sbjct: 296 PYVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTG 355
Query: 409 FVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKE 468
F+HSDPHPGN+LVR+ AEL+LLDHGLY L + R +LW +I+ +D AM+
Sbjct: 356 FIHSDPHPGNVLVRKG-PDGKAELVLLDHGLYQFLEEKDRAALCQLWRAIILRDDAAMRA 414
Query: 469 HCTKLGVGDMYGLFACMVS------GRSWDAIEAGIEKTKF-TESEKEVFQRDVPNLIPE 521
H LGV D Y LFA M+ G+ W + E+ + + +E F+
Sbjct: 415 HAAALGVQD-YLLFAEMLMQRPVRLGQLWGSHLLSREEAAYMVDMARERFE--------A 465
Query: 522 ISDILTRVNRQVLLILKTNDLIRGIEHTLKTHARRVSLL 560
+ +L + R +LL+L+ + +R I L R L+
Sbjct: 466 VMAVLRELPRPMLLVLRNINTVRAINVALGAPVDRYFLM 504
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 230 bits (586), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 246/448 (54%), Gaps = 23/448 (5%)
Query: 130 NYDVNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHKEAAEQLLE 189
N D L +R +R F I + YK L D E ++ HK AA+ +++
Sbjct: 194 NIDKLDLAFIRNLRVLYAGFKITFYYKYYLMGLNRGD---EGFAENIQIAHKLAAKAMVD 250
Query: 190 LCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSE 249
LC NKG++IKV Q I +L+++LP+EY++++ + AP +++ + K + GK P +
Sbjct: 251 LCYQNKGIFIKVAQIIASLDHILPQEYIKSLSIFQDHAPFVTFEEVEKLFKIETGKHPDD 310
Query: 250 IFASIEPNPMGAASLAQVHKATLH----DGSTIALKVQHRNVRDNANIDIKCMEALVHVV 305
+F E P+ +ASLAQVHKA L + +A+KVQ+ + + D+ ++ ++ +
Sbjct: 311 MFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSLDNVLTYI 370
Query: 306 AWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRV 365
FP F+F W++ E + +EL+F+ EA N K+ ++F L IP+++ + T R+
Sbjct: 371 TLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQLFIGNQQLSIPKVYWNHTTKRI 430
Query: 366 LAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQ 425
L M+F+ G +I++ + + + I++ E+ ++++ IF GF+HSDPHPGN+LVR+
Sbjct: 431 LTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHSDPHPGNLLVRKT- 489
Query: 426 SSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYGLFACM 485
+ +L+LLDHGLY + ++ R ++ LW S+ D + + +LG G++A
Sbjct: 490 PNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGDAKTSEFYAERLGA----GIYAKH 545
Query: 486 VSGRSWDAIEAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLLILKTNDLIRG 545
+ I + +K E+ + + + + I++IL + +++LL+LKTN+LIR
Sbjct: 546 L------GILLNLNPSKSRENLRNMKRELKDQTLVVINEILKNLPKEILLVLKTNNLIRQ 599
Query: 546 IEHTLKTH-ARRVSLLVMSRCCIRSVYS 572
I TH L M++ CI+ +Y+
Sbjct: 600 I----TTHFGIENGFLNMAKTCIKGIYT 623
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 226 bits (576), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 267/486 (54%), Gaps = 17/486 (3%)
Query: 137 VAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKV-HKEAAEQLLELCKMNK 195
V VR RA C I YK Y TP+ +SE KSK+ H+E+A+ +L+LC N
Sbjct: 205 VIVRFYRAMKCATKIMINYKILSY---TPEKSSEYLE--KSKICHQESADLILDLCLTNG 259
Query: 196 GVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIE 255
G+YIK GQ+I +L ++LP +Y +T+ VL +AP ++ +V +DLG P+ F+ +
Sbjct: 260 GLYIKAGQYIASLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSDFD 319
Query: 256 PNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFL 315
P+ AASLAQVH+A +G +A+KVQ+ +++ N + DI L+ +V FP+F+F
Sbjct: 320 RLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFEFN 379
Query: 316 WLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEGGQ 375
W+ +E K + KEL+F +EA N + + + IP++ + R+L +F+ G +
Sbjct: 380 WMAEEMKNVLIKELDFSQEADNAERAAQDLSSNNNAYIPKVFRPYSSKRILTTEFIHGCK 439
Query: 376 INDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR-AQSSNSAELIL 434
IN+V I ++ VS + ++ E IF FVH DPH GN+LVR+ N +++L
Sbjct: 440 INNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGNVLVRQHPNHPNQPQIVL 499
Query: 435 LDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYGLFACMVSGRSWDAI 494
LDHGLY ++FR + L+ +++ + ++++ LGV + + LF+ M+ R+++
Sbjct: 500 LDHGLYREYDEEFRLNFCNLYKNLVLCNNKKVEKYSKALGVQN-WKLFSTMILMRNFEGS 558
Query: 495 EAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLLILKTNDLIRGIEHTLKTHA 554
G+ + +E +++ + L +I+ ++ + R +LLIL+ N+L+R I L +
Sbjct: 559 SVGLSNSISSEELEKLLSGAIERL-KDINLLMKAMPRHLLLILRNNNLLRSINMELGSPV 617
Query: 555 RRVSLLVMSRCCIRSVYSEEYSHAHSHLKKCVLLISEKWQLFKL----SMYYFYLGISRP 610
R S +M+R + + S S +S + + V + EK L + +YY+++
Sbjct: 618 NRFS--IMARYAAKGLNSN--SSKNSGIIRLVKSVEEKVSLEVMLKGYELYYYFVNRILS 673
Query: 611 MLEGFH 616
+L H
Sbjct: 674 ILIRLH 679
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 224/448 (50%), Gaps = 29/448 (6%)
Query: 106 RRHIKYALGVGSVIGGTGILLHRNNYDVNSLV-AVRLVRAASCVFNIAYIYKKALYQKAT 164
R+ +K + VG+ G G+ Y+ ++L ++R V AS IA YK
Sbjct: 45 RKWMKRFVFVGA--AGIGVYAWDRVYNAHALTRSIRTVYTASI---IAADYKLNF----- 94
Query: 165 PDPTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLH 224
SE+ ++ +H+ A++L + N G+YIK+GQ I LP+ Y + + +
Sbjct: 95 ----SEKKADKIDALHQRVAQRLFKTIYKNGGLYIKMGQIIAMQSNNLPEAYGKAFQGMF 150
Query: 225 SKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQH 284
AP +++ + KE G+ E+FASIE +AS+AQVH+A L G +A+K+Q
Sbjct: 151 DNAPQVEWEELQDIFKEQYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAVKIQK 210
Query: 285 RNVRDNANIDIKCMEALVHVV-AWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTK 343
+V + D+ + +++V W+F + VD + E++F EA+N +
Sbjct: 211 PDVAKQMSWDLLVYKYMMYVYDKWIF-HIPLYFTVDYVSERLRSEVDFTTEANNSEHARE 269
Query: 344 MFAHFPWLK----IPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKL 399
+L+ IP+++ ++ RV+ ++ +G + D ++E ++ E+ L +
Sbjct: 270 GVEETDYLRDKIYIPKVYKEISGKRVMVTEWADGIPLYDQTALSEAGMSKKEILTNLFRF 329
Query: 400 YSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSIL 459
+ +F+S VH DPHPGNILVR+ Q+ + ++LDHGLY ++ FR E+A L+ +
Sbjct: 330 LAFQMFHSKQVHCDPHPGNILVRKNQAG-LCQTVILDHGLYVFESEKFRKEFALLFTAAY 388
Query: 460 NKDKVAMKEHCTKLGVGDMYGLFACMVSGRSWDAIEAGIEKTKFTESEKEVFQRDVP--- 516
+ DK ++ + G+G LFA + D E + S+KE FQ+ +
Sbjct: 389 SLDKKSILQVMDAWGIGQP-ELFANRMLNIPMD--EEQPHTGEKIISKKEAFQQQLAERK 445
Query: 517 NLIPEISDILTRVNRQVLLILKTNDLIR 544
I + D TR+ +++L++ + LI+
Sbjct: 446 KFIGFLQDC-TRLPKELLMLGRCLMLIQ 472
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 152/315 (48%), Gaps = 19/315 (6%)
Query: 168 TSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKA 227
T E+ + + K E LL L +IKVGQ L P EYVE + L +
Sbjct: 73 TEEKLQQRRRRQAKWIRENLLSLGP----TFIKVGQLFSTRSDLFPAEYVEELSKLQDEV 128
Query: 228 PMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNV 287
P + +++E+LGK ++++ S +P P+ AASL QVHKA LH G + +KVQ +
Sbjct: 129 PAFSYEQAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGL 188
Query: 288 RDNANIDIKCMEALVHVVAWVF---PEFK----FLWLVDETKRNIPKELNFLEEASNITK 340
+ ID+ A++ +A F P++ + + +E + + +E ++L E +
Sbjct: 189 KKLFTIDL----AILKKIAQYFQNHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADT 244
Query: 341 VTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLY 400
+ F W+K+P+++ ++++L ++++ G +I+ D + + E++ + Y
Sbjct: 245 FRRNFRGEDWVKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAY 304
Query: 401 SEMIFNSGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILN 460
+ N GF H+DPHPGN+ V S + ELI D G+ +T D + + +
Sbjct: 305 LFQLLNHGFFHADPHPGNLAV----SPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAE 360
Query: 461 KDKVAMKEHCTKLGV 475
K+ + LG
Sbjct: 361 KNAERIVNSLVALGA 375
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 152/290 (52%), Gaps = 9/290 (3%)
Query: 177 SKVHKEAAEQLLELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDI 235
SK+ E L L + G ++IK GQ + L+P +Y + L K P +
Sbjct: 43 SKLKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS 102
Query: 236 LAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDI 295
+++ LG+ +++A E P+ +AS+AQVHKA LH G +A+KV N+ D+
Sbjct: 103 REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDL 162
Query: 296 KCMEALVHVVAWVFPEFKFL---WLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLK 352
M V +F + K L +V E + + EL+ + EA+N +++ + F + L
Sbjct: 163 SLMRFGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLI 222
Query: 353 IPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHS 412
+P++ D CTS VL +++M+G ++D+ + + I++++++D +++ +F GF H+
Sbjct: 223 VPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282
Query: 413 DPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
D HPGNILV + I LD G+ +LTD + A +L+ N+D
Sbjct: 283 DMHPGNILV-----AADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRD 327
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 150/290 (51%), Gaps = 9/290 (3%)
Query: 177 SKVHKEAAEQLLELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDI 235
SK+ E L L + G ++IK GQ + L+P +Y + L K P +
Sbjct: 43 SKLKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS 102
Query: 236 LAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDI 295
+++ LG+ +++A E P+ +AS+AQVHKA LH G +A+KV N+ D+
Sbjct: 103 REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDL 162
Query: 296 KCMEALVHVVAWVFPE---FKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLK 352
M V +F + K L +V E + + EL+ + EA+N ++ + F + L
Sbjct: 163 SLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFHNSNMLI 222
Query: 353 IPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHS 412
+P++ D CTS VL +++M+G + D+ + + I++++++D +++ +F GF H+
Sbjct: 223 VPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282
Query: 413 DPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
D HPGNILV + I LD G+ +LTD + A +L+ N+D
Sbjct: 283 DMHPGNILV-----AADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRD 327
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 13/300 (4%)
Query: 179 VHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAV 238
V + A QL EL YIKVGQ + L+P +++ + L + P P +
Sbjct: 99 VSRAKAIQLRELLTNLGPTYIKVGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRF 158
Query: 239 LKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCM 298
++E+LG EI+A + P P+ AASL QV+K L G +A+KVQ ++ +DI M
Sbjct: 159 IEEELGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDIYIM 218
Query: 299 EALVHVVAWVFPEFK-----FLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKI 353
+L W K + + DE + +E+N+ +EA N K +++ P + +
Sbjct: 219 RSL---SLWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYV 275
Query: 354 PQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSD 413
P I+ RVL M+++EG ++ ++ I I+ + + + + GF H+D
Sbjct: 276 PSIYWQYTGRRVLTMEWVEGIKLTNIKAIQAQGIDATHLVEVGVQCSLRQLLEHGFFHAD 335
Query: 414 PHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKL 473
PHPGN+L + L LD G+ +++ R + + ++N+D ++ + KL
Sbjct: 336 PHPGNLL-----AMADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKL 390
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 23/332 (6%)
Query: 148 VFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHKEAAEQLLELCKMNKG----------- 196
+F IA+++ + Y+ T P SE + LK A L K+++G
Sbjct: 7 LFRIAWVFCR--YRLDTFLPLSELPTPLKI-FFLLAPWHLFPQPKLSRGDRLRLALEELG 63
Query: 197 -VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIE 255
V++K GQ + LLP + E++K L + P P + ++++ LG SE+FA
Sbjct: 64 PVFVKFGQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLGAPVSELFAEFS 123
Query: 256 PNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFL 315
P+PM +AS+AQVH ATL +G + +KV + D+ M + ++ + E K L
Sbjct: 124 PDPMASASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDLGLMYLMAGLLEKYWSEGKRL 183
Query: 316 W---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFME 372
+V + I EL+ EA+N +++ + F + P + IP I D VL M+ +
Sbjct: 184 HPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYIPFIDWDYTRKSVLVMERIH 243
Query: 373 GGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE- 431
G I DV + + +N+ +++K +++ +F F H+D HPGNI V SN A+
Sbjct: 244 GIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMHPGNIFV---DVSNPADP 300
Query: 432 -LILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
I +D G+ +L D ++ A+ L+ +D
Sbjct: 301 KYIAIDFGIVGTLAPDDQSYLARNLLAFFRRD 332
>sp|Q2SN14|UBIB_HAHCH Probable ubiquinone biosynthesis protein UbiB OS=Hahella chejuensis
(strain KCTC 2396) GN=ubiB PE=3 SV=1
Length = 546
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 144/269 (53%), Gaps = 4/269 (1%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
+++K GQ + + LLP++ + +K L K P + +++E L SE+FA +
Sbjct: 65 IFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEESLKSPVSELFADFQT 124
Query: 257 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLW 316
PM +AS+AQVH ATL +G + +KV + +DI M + +V + + K L
Sbjct: 125 YPMASASIAQVHAATLKNGKEVVVKVIRPGIEKTIRLDIALMLLVARLVENYWEDGKRLH 184
Query: 317 LVDETK---RNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEG 373
V+ K I EL+ EA+N +++ + FA + IP+++ ++ SRVL M+ + G
Sbjct: 185 PVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELIYIPEVYWEMTHSRVLVMERIYG 244
Query: 374 GQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELI 433
I DV+ + + N+N+ ++++ +++ +F F H+D HPGNI V + +N I
Sbjct: 245 VPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVDVSNPANP-RYI 303
Query: 434 LLDHGLYASLTDDFRTEYAKLWLSILNKD 462
+D G+ +LT + ++ A+ L+ +D
Sbjct: 304 AIDCGIVGTLTPEDQSYLARNLLAFFRRD 332
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 170 EEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPM 229
++ NL+ + K A E ++ ++K+GQ + L P +Y+E + L P
Sbjct: 134 QKQGNLEKNMKKRAIELRRIFTRLGP-TFVKLGQGLSTRPDLCPPDYLEELAELQDALPT 192
Query: 230 SPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATL-HDGSTIALKVQHRNVR 288
P + A ++ +L IF+S+ P P+ AASL QV+KA L + G +A+KVQ +
Sbjct: 193 FPDAEAFACIERELDLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIE 252
Query: 289 DNANIDIKCMEALVHVV-AWV-FPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFA 346
+ +D + + ++ +V F L L+DE + +ELN+++EA N + K++A
Sbjct: 253 EAIGLDFYLIRGVGKLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYA 312
Query: 347 HFPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFN 406
+ +P I D + +VL M+++EG ++N+ I + V ++ + + +
Sbjct: 313 DKADVLVPDIFWDYTSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLE 372
Query: 407 SGFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAM 466
GF H+DPHPGN+L ++ +L LD G+ + ++ R + ++N+D AM
Sbjct: 373 YGFFHADPHPGNLL-----ATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAM 427
>sp|Q02EV2|UBIB_PSEAB Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=ubiB PE=3 SV=1
Length = 533
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 7/284 (2%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP + + L K P P + + ++E LG
Sbjct: 60 LRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAK 119
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
++FA E P+ +AS+AQVH A L G + +KV N+ DI + L +
Sbjct: 120 IEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAE 179
Query: 307 WVFPEFKFLW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
V E + L +V + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 180 RVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRP 239
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G + D++ + + + ++++ +++ +F F H+D HPGNI V
Sbjct: 240 KVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMHPGNIFV-S 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
++ S + I +D G+ SLTD+ + A+ ++ +D KVA
Sbjct: 299 TRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVA 342
>sp|B7V3F8|UBIB_PSEA8 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain LESB58) GN=ubiB PE=3 SV=1
Length = 533
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 7/284 (2%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP + + L K P P + + ++E LG
Sbjct: 60 LRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAK 119
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
++FA E P+ +AS+AQVH A L G + +KV N+ DI + L +
Sbjct: 120 IEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAE 179
Query: 307 WVFPEFKFLW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
V E + L +V + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 180 RVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRP 239
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G + D++ + + + ++++ +++ +F F H+D HPGNI V
Sbjct: 240 KVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMHPGNIFV-S 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
++ S + I +D G+ SLTD+ + A+ ++ +D KVA
Sbjct: 299 TRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVA 342
>sp|Q9HUB8|UBIB_PSEAE Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=ubiB PE=3 SV=1
Length = 533
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 7/284 (2%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP + + L K P P + + ++E LG
Sbjct: 60 LRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAK 119
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
++FA E P+ +AS+AQVH A L G + +KV N+ DI + L +
Sbjct: 120 IEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAE 179
Query: 307 WVFPEFKFLW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
V E + L +V + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 180 RVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRP 239
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G + D++ + + + ++++ +++ +F F H+D HPGNI V
Sbjct: 240 KVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMHPGNIFV-S 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
++ S + I +D G+ SLTD+ + A+ ++ +D KVA
Sbjct: 299 TRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVA 342
>sp|A6VDI8|UBIB_PSEA7 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain PA7) GN=ubiB PE=3 SV=1
Length = 533
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 7/284 (2%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP + + L K P P + + ++E LG
Sbjct: 60 LRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAK 119
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
++FA E P+ +AS+AQVH A L G + +KV N+ DI + L +
Sbjct: 120 IEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAE 179
Query: 307 WVFPEFKFLW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
V E + L +V + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 180 RVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRP 239
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G + D++ + + + ++++ +++ +F F H+D HPGNI V
Sbjct: 240 KVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMHPGNIFV-S 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
++ S + I +D G+ SLTD+ + A+ ++ +D KVA
Sbjct: 299 TRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVA 342
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 143/274 (52%), Gaps = 6/274 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
++IK GQ + LLP + + + L + P P +A+++ LG S++FA +
Sbjct: 69 IFIKFGQLLSTRRDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQLFARFDS 128
Query: 257 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLW 316
P+ +AS+AQVH A L G + +KV ++ D+ + L + + + L
Sbjct: 129 QPLASASVAQVHAAQLKSGEEVVVKVVRPGLKPVIRQDLAWLFLLARIAERASADARRLR 188
Query: 317 ---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEG 373
+V + ++ I EL+ L EA+N +++ + F P L +PQ++ DLC +VL M+ + G
Sbjct: 189 PVEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYWDLCRHQVLVMERIYG 248
Query: 374 GQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELI 433
+ D+ + + ++ ++++ +++ +F F H+D HPGNI V ++ S + I
Sbjct: 249 VPVTDLATLADQRTDMKLLAERGVEIFFTQVFRDSFFHADMHPGNIFV-STRTPWSPQYI 307
Query: 434 LLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
+D G+ SLTD+ + A+ ++ +D KVA
Sbjct: 308 AIDCGIIGSLTDEDQDYLARNLIAFFKRDYRKVA 341
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 12/290 (4%)
Query: 198 YIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPN 257
+IK+GQ + ++P EY+E L + P + +AV++++L EIF E
Sbjct: 72 FIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVT 131
Query: 258 PMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFL-- 315
P+ +ASL QVH+A L G + +KVQ + N+D + + + + P F+ L
Sbjct: 132 PLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQTLRLAKRWLPGFRRLAQ 191
Query: 316 -----WLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDF 370
+ E + E++++ E N + + FA +P +++P+I+ T VL +++
Sbjct: 192 KYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVPEIYWQYTTRMVLTLEY 251
Query: 371 MEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSA 430
+ G +++D + IN+ V Y + + GF SDPHPGN+ V +
Sbjct: 252 LPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAV-----DSQG 306
Query: 431 ELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYG 480
+LI D G A + + + + + ++L KD + E +G+ + G
Sbjct: 307 DLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVEPKG 356
>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810,
chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1
SV=1
Length = 692
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 157/304 (51%), Gaps = 23/304 (7%)
Query: 178 KVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILA 237
++ K A +L +L Y+K+ Q + + L+P Y++ + +L + ++P +A
Sbjct: 114 QMFKVRAAELRKLLVELGPAYVKIAQAVSSRPDLIPPIYLDELSLLQDQ--ITPFSTEVA 171
Query: 238 --VLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATL-HDGSTIALKVQHRNVRDNANID 294
+++++LG E+F+ I P P+ AASL QV++A L G +A+KVQ VR +D
Sbjct: 172 FNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALD 231
Query: 295 ---IKCMEALVHVVAWVFPEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWL 351
++ + L+ + + +VDE ++ KE+++L EA N K K++ +
Sbjct: 232 TLILRYIAGLIKKAGRFNSDLE--AVVDEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDV 289
Query: 352 KIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVH 411
+P+++ + TS+VL M+++EG ++N+V+ + + VY ++L GF H
Sbjct: 290 LVPKMYTEYSTSKVLVMEWVEGQKLNEVNDLYLVEVGVYCSFNQL--------LEYGFYH 341
Query: 412 SDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCT 471
+DPHPGN L + +L LD G+ + R + + L ++N+D A+ +
Sbjct: 342 ADPHPGNFL-----RTYDGQLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFV 396
Query: 472 KLGV 475
LG+
Sbjct: 397 TLGL 400
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
++IK GQ + LLP++ + + +L + P + + +++E LGK SE+F+ +
Sbjct: 69 IFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMKLIEEQLGKKISEVFSRFDV 128
Query: 257 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLW 316
+P+ +AS+AQVH A L G + +KV ++ D+ + L + + L
Sbjct: 129 DPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQDLAWLFILARAAERFSADARLLH 188
Query: 317 LVD---ETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEG 373
VD + ++ I EL+ L EA+N +++ + F P L +PQ++ D C +VL M+ + G
Sbjct: 189 PVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYG 248
Query: 374 GQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELI 433
Q+ D+ + + ++ ++++ +++ +F F H+D HPGNI V + S + I
Sbjct: 249 VQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTV-NPWSPQYI 307
Query: 434 LLDHGLYASLTDDFRTEYAKLWLSILNKD 462
+D G+ SLT + + A+ + +D
Sbjct: 308 AIDCGIVGSLTPEDQDYLARNLFAFFKRD 336
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 171/373 (45%), Gaps = 27/373 (7%)
Query: 198 YIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPN 257
+IK+GQ + LLP Y++ + L + P DI + E+L F +
Sbjct: 47 FIKIGQILSTRPDLLPLPYIKELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 258 PMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVV------AWVFPE 311
P+G+AS+AQVH A L DG + +K+Q + + D+ ++ L+++ A + P+
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKKLLNITKTKFTDALIDPK 166
Query: 312 FKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
+DE + +EL+F+ E +NI K K+ +++ P LCT +++ M+ +
Sbjct: 167 ----EAIDELFISTTQELDFINEINNIKKFKKLNEDVKFVRTPYTIDKLCTEKIIVMEKI 222
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G +I+++ + ++ E+ KL Y + +F GF H DPHPGN+L+R
Sbjct: 223 VGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHPGNLLIRENH------ 276
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLGVGDMYGLFACMVSGRSW 491
+ +D G+ +++ + L++ D M +GV Y + +
Sbjct: 277 ICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVKKGYVNRNSLYESIEY 336
Query: 492 ---DAIEAGIEKTKFTESEKEVFQRDVPNLIPEISDILTRVNRQVLLILKTNDLIRGIEH 548
+ I ++ K + +E+FQ N I ++ +++ ++LK+ +I G+
Sbjct: 337 LFDNYISVSLKNIKISVMLQEIFQISKNNNI--------KLPKELTMLLKSTLMIEGVIA 388
Query: 549 TLKTHARRVSLLV 561
+ V +L+
Sbjct: 389 RISPELSIVDVLI 401
>sp|Q4KJL4|UBIB_PSEF5 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3
SV=1
Length = 534
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 144/279 (51%), Gaps = 5/279 (1%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP++ + + +L + P + +A+++ LGK
Sbjct: 59 LRLALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQKSVALIEAQLGKK 118
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
S++F+ + P+ +AS+AQVH A L G + +KV ++ D+ + L
Sbjct: 119 ISDVFSRFDIEPLASASVAQVHAAKLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAE 178
Query: 307 WVFPEFKFLWLVD---ETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
+ + + L VD + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 179 KLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRP 238
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G Q+ D+ + + ++ ++++ +++ +F F H+D HPGNI V
Sbjct: 239 KVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVST 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
Q S + I +D G+ SLT + + A+ + +D
Sbjct: 299 VQPW-SPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRD 336
>sp|C1DHS4|UBIB_AZOVD Probable ubiquinone biosynthesis protein UbiB OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1
Length = 537
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 7/284 (2%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP++ + + L + P + +A+++E LG
Sbjct: 60 LRLALQDLGPIFIKFGQILSTRRDLLPEDIADELTWLQDRVPPFNPQQSVALIEEQLGAR 119
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
E FA + P+ +AS+AQVH A L G + +KV ++ D+ + +
Sbjct: 120 VDEAFARFDSEPLASASVAQVHAAQLKTGEEVVVKVVRPGLKAVIRQDLAWLYLFARLAE 179
Query: 307 WVFPEFKFLWLVD---ETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
E + L LVD + ++ I EL+ L EA+N +++ + F P L +PQI+ D C
Sbjct: 180 RASTEARRLHLVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWDWCRP 239
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G + D+ + + ++ ++++ +++ +F F H+D HPGNI V
Sbjct: 240 KVLVMERIYGVPVTDLAALVDQGTDLKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVST 299
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
Q + + I +D G+ SLT + A+ L+ +D KVA
Sbjct: 300 RQPWDP-QYIAIDCGIVGSLTPQDQDYLARNLLAFFKRDYRKVA 342
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 5/279 (1%)
Query: 188 LELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKD 246
L L + G ++IK GQ + LLP++ + + L + P + + +++E LGK
Sbjct: 59 LRLALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKK 118
Query: 247 PSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVA 306
SE+F+ + P+ +AS+AQVH A L G + +KV ++ D+ + L
Sbjct: 119 ISEVFSRFDVEPLASASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLAWLFILARAAE 178
Query: 307 WVFPEFKFLWLVD---ETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTS 363
V + + L VD + ++ I EL+ L EA+N +++ + F P L +PQ++ D C
Sbjct: 179 KVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRP 238
Query: 364 RVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRR 423
+VL M+ + G Q+ D+ + + ++ ++++ +++ +F F H+D HPGNI V
Sbjct: 239 KVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVST 298
Query: 424 AQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
+ S + I +D G+ SLT + + A+ + +D
Sbjct: 299 V-NPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRD 336
>sp|A0KEF8|UBIB_AERHH Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=ubiB PE=3 SV=1
Length = 546
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 5/270 (1%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
++IK GQ + LLP + E + +L + P + ++ LG +F +
Sbjct: 67 IFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARRQIEASLGCTIETLFDDFDE 126
Query: 257 NPMGAASLAQVHKATL-HDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE---F 312
P+ +AS+AQVH A L +G I +KV ++ D++ M+AL +VA P+
Sbjct: 127 TPLASASIAQVHTARLKENGREIVIKVIRPDIEPVIEADLRLMQALARLVARFVPQSGRL 186
Query: 313 KFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFME 372
+ + +V+E ++ I ELN + EA+N ++ + F L +P++ + C +VL M+ +
Sbjct: 187 RPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEVFTEHCREQVLVMERIY 246
Query: 373 GGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAEL 432
G ++D+ + N N+ ++++ +++ +F F H+D HPGNI V N
Sbjct: 247 GIPVSDIAALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPENPL-W 305
Query: 433 ILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
I +D G+ +L + + A+ +L+ N+D
Sbjct: 306 IGIDCGIVGTLNREDKRYLAENFLAFFNRD 335
>sp|A1SAK0|UBIB_SHEAM Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiB PE=3
SV=1
Length = 549
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 11/273 (4%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
VYIK GQ + LL E+ + + +L + P ++ +L +F +
Sbjct: 67 VYIKFGQMLSTRRDLLSDEWAQELSMLQDRVPAFDSALAREAIEAELKAPIDSLFDDFDD 126
Query: 257 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWV------F 309
P+ +AS++QVH ATL +G + LKV NV N D++ M + V WV
Sbjct: 127 TPLASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELM---LQVATWVNRLLGEG 183
Query: 310 PEFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMD 369
+ + +V++ + I ELN EA N TK+ F L IP ++ +LC R++ M+
Sbjct: 184 NRLRPVEVVEDYQNTILGELNLKLEALNATKLRNNFLDSDALYIPYVYEELCHPRLMVME 243
Query: 370 FMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNS 429
++G ++D++ + N+ ++++ +L+ +F F H+D HPGNI + R N
Sbjct: 244 RIDGIPVSDIEALNAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREHPENP 303
Query: 430 AELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
I LD G+ SL ++ + A+ +L+ N+D
Sbjct: 304 F-YIGLDCGIMGSLNEEDKRYLAENFLAFFNRD 335
>sp|Q6LVW8|UBIB_PHOPR Probable ubiquinone biosynthesis protein UbiB OS=Photobacterium
profundum GN=ubiB PE=3 SV=1
Length = 545
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 141/277 (50%), Gaps = 11/277 (3%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAV--LKEDLGKDPSEIFASI 254
V+IK GQ + L P + + +L + + P LA ++ LG F
Sbjct: 68 VWIKFGQMMSTRRDLFPPHIADQLALLQDQ--VEPFDGNLAKEHMELSLGGPIETWFDDF 125
Query: 255 EPNPMGAASLAQVHKATL-HDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFK 313
+ P+ +AS+AQVH ATL +G + LKV ++ DIK M + H+VA + PE +
Sbjct: 126 DETPLASASIAQVHTATLKENGREVVLKVIRPDILPVIQADIKLMYRMAHIVARLLPEAR 185
Query: 314 FLW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDF 370
L +V E ++ + ELN + EA+N ++ + F L +P++ D ++ +L M+
Sbjct: 186 LLRPVEVVREYEKTLLDELNMMREAANSIQLRRNFEDSDTLYVPEMFTDYSSTNLLVMER 245
Query: 371 MEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSA 430
+ G Q++D+D + N N+ +S+ ++ +F F H+D HPGNI V ++ +
Sbjct: 246 IYGIQVSDIDALIANGTNMKLLSENAVNIFFTQVFRDSFFHADMHPGNIFV-SYENPETP 304
Query: 431 ELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
+ I LD G+ +L D + A+ L+ ++D KVA
Sbjct: 305 QWIALDCGIVGTLNRDDKRYLAENLLAFFHRDYRKVA 341
>sp|C4L962|UBIB_TOLAT Probable ubiquinone biosynthesis protein UbiB OS=Tolumonas auensis
(strain DSM 9187 / TA4) GN=ubiB PE=3 SV=1
Length = 543
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 144/281 (51%), Gaps = 4/281 (1%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
V+IK GQ + LLP + E + +L + P + +++ LG+ +FA +
Sbjct: 67 VFIKFGQMLSTRRDLLPPDLAEELAMLQDRVPSFDGQLAREQIEQALGQPIEALFADFDQ 126
Query: 257 NPMGAASLAQVHKATL-HDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFP--EFK 313
P+ +AS+AQVH A L + + I +KV +++ N DI+ M +VA++ P +
Sbjct: 127 QPLASASVAQVHTARLKENNAEIVIKVIRPDIKPVINDDIRLMRLCAKIVAFLIPNNRLR 186
Query: 314 FLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFMEG 373
+ +++E +R + ELN + EA+N ++ + F + L +P ++ D C VL M+ + G
Sbjct: 187 PVEVIEEYRRTLLDELNLMSEAANAIQLRRNFENSSHLYVPLVYSDYCRESVLVMERIYG 246
Query: 374 GQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAELI 433
++D + N ++ ++++ +++ +F F H+D HPGN+ V + + + I
Sbjct: 247 IPVSDRAALEANGTDLKLLAERGVEVFFTQVFRDSFFHADMHPGNVFV-SYEHPHDPQWI 305
Query: 434 LLDHGLYASLTDDFRTEYAKLWLSILNKDKVAMKEHCTKLG 474
+D G+ +L + A+ +L+ N+D + E + G
Sbjct: 306 GIDCGIVGTLNRQDKRYLAENFLAFFNRDYRKVAELHVQSG 346
>sp|Q2NWT9|UBIB_SODGM Probable ubiquinone biosynthesis protein UbiB OS=Sodalis
glossinidius (strain morsitans) GN=ubiB PE=3 SV=1
Length = 544
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAV--LKEDLGKDPSEIFASI 254
V+IK GQ + L P + + +L + + P LA ++ +G+ F
Sbjct: 67 VWIKFGQMLSTRRDLFPPAIADQLAMLQDR--VQPFDGALARAHIERSMGQPLETWFDDF 124
Query: 255 EPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
+ P+ +AS+AQVH A L +G + +KV ++ D++ M L V + P+ +
Sbjct: 125 QQEPLASASIAQVHTARLKNGQEVVIKVIRPDILPMIKADMRLMYRLASWVPHLLPDGRR 184
Query: 315 LWLVD---ETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L V+ E ++ + ELN L EA+N ++ + F P L IP+++PD C+ ++ M+ +
Sbjct: 185 LRPVEVVLEYEKTLLDELNLLREAANAIQLRRNFDGSPMLYIPEVYPDYCSETMMVMERI 244
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G +NDV + + N+ ++++ +++ +F F H D HPGNI V N +
Sbjct: 245 YGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDMHPGNIFVSFEHPENP-Q 303
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 304 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 339
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 138/276 (50%), Gaps = 17/276 (6%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILA--VLKEDLGKDPSEIFASI 254
+++K GQ + LLP EY + + +L + P P +A V++ LG+ E+F
Sbjct: 62 IFVKFGQVLSTRRDLLPPEYADELALLQDRVP--PFDGDIARQVVERSLGRKVEELFVDF 119
Query: 255 EPNPMGAASLAQVHKATLHD-----GSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVF 309
+ P+ +AS+AQVHKA L G +A+KV + D+ M L V +F
Sbjct: 120 DLKPVASASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDLSLMRTLAGWVEKLF 179
Query: 310 PEFKFL---WLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVL 366
+ K L +V E + + EL+ + EA+N +++ + F L +P++ D + VL
Sbjct: 180 ADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREVL 239
Query: 367 AMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQS 426
+++M G + ++ + E +++ ++S +++ +F GF H+D HPGNI V
Sbjct: 240 TLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHPGNIFV----- 294
Query: 427 SNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
+ I LD G+ SLTD + A +L+ N+D
Sbjct: 295 AADGRYIALDFGIVGSLTDTDKHYLAVNFLAFFNRD 330
>sp|A4STK9|UBIB_AERS4 Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
salmonicida (strain A449) GN=ubiB PE=3 SV=1
Length = 546
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 5/270 (1%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 256
++IK GQ + LLP + E + +L + P + ++E LG +F +
Sbjct: 67 IFIKFGQMLSTRRDLLPPDIAEELAMLQDRVPPFCGQAARLKIEESLGCPVETLFDDFDE 126
Query: 257 NPMGAASLAQVHKATL-HDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE---F 312
P+ +AS+AQVH L +G I +KV ++ D++ M+ L +VA P+
Sbjct: 127 TPLASASIAQVHTGRLKENGREIVIKVIRPDIEPVIEADLRLMQTLARLVARFVPQSARL 186
Query: 313 KFLWLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFME 372
+ + +V+E ++ I ELN + EA+N ++ + F L +P++ + C VL M+ +
Sbjct: 187 RPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSDALYVPEVFTEHCREHVLVMERIY 246
Query: 373 GGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAEL 432
G ++D+ + N N+ ++++ +++ +F F H+D HPGNI V N
Sbjct: 247 GIPVSDIPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPDNPL-W 305
Query: 433 ILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
I +D G+ +L + + A+ +L+ N+D
Sbjct: 306 IGIDCGIVGTLNREDKRYLAENFLAFFNRD 335
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 163/342 (47%), Gaps = 19/342 (5%)
Query: 140 RLVRAASCVFNIAYIYKKALYQKATPDPTSEEYS------NLKSKVHKEAAEQLLELCKM 193
RL R +F I Y L Q A S L + + E+L +
Sbjct: 3 RLFRLCKIIFVILY---HGLDQLALSGFKSRRIRALVWVLTLGRRQTRPRGERLRLALEQ 59
Query: 194 NKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFAS 253
+++K GQ + LLP + + + L + P K A+++ LGK S +F
Sbjct: 60 LGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKIAAAIVERSLGKPLSALFHR 119
Query: 254 IEPNPMGAASLAQVHKATLH----DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVF 309
+ +P+ +AS+AQVH ATL DG +A+KV + + D+ M + + ++
Sbjct: 120 FDHHPVASASIAQVHFATLRGGPDDGREVAVKVLRPGMLPVIDSDLALMRDVATWMEKLW 179
Query: 310 PEFKFL---WLVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVL 366
+ K L +V E + + EL+ + EA+N +++ + FA L +P++ D CTS V
Sbjct: 180 ADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAKSELLLVPEVFWDWCTSEVF 239
Query: 367 AMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQS 426
M+ M G +++ D + ++ ++++ +++ +F GF H+D HPGNILV A
Sbjct: 240 VMERMHGVRVSHADELRAAGVDTHKLARDGVEIFFTQVFRDGFFHADMHPGNILVSVAPE 299
Query: 427 SNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVAM 466
S I LD G+ +L++ + A+ +L+ +D +VA+
Sbjct: 300 S-LGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVAL 340
>sp|B8CI04|UBIB_SHEPW Probable ubiquinone biosynthesis protein UbiB OS=Shewanella
piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1
Length = 549
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 10/295 (3%)
Query: 175 LKSKVHKEAAEQLLELCKMNKG-VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMK 233
L++K + + L+L G VYIK GQ + LL E+ E + +L + P P
Sbjct: 44 LRNKHKDKVGGERLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVP--PFD 101
Query: 234 DILA--VLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN 290
+A ++++L F E P+ +AS++QVH ATL +G+ + LKV +V
Sbjct: 102 SAIARESIEQELNAPIETYFDDFEDTPLASASISQVHTATLKSNGAKVVLKVLRPDVEQK 161
Query: 291 ANIDIKCMEALVHVVAWVFP---EFKFLWLVDETKRNIPKELNFLEEASNITKVTKMFAH 347
+ DI+ M + + + + +V++ + I ELN EA N K+ F
Sbjct: 162 VHADIQLMSQAANFLESLLGANNRLRPAEVVEDYRTTIEGELNLKLEALNAIKLRNNFLD 221
Query: 348 FPWLKIPQIHPDLCTSRVLAMDFMEGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNS 407
L IP ++ +LC +R++ M+ ++G ++D + N+ ++++ +L+ +F
Sbjct: 222 SNALYIPYMYEELCFTRLIVMERIDGVPVSDKAALEAQGTNLKLLAERGVELFFTQVFRD 281
Query: 408 GFVHSDPHPGNILVRRAQSSNSAELILLDHGLYASLTDDFRTEYAKLWLSILNKD 462
F H+D HPGNI V R + N I LD G+ +LTD+ + A+ +L+ N+D
Sbjct: 282 NFFHADMHPGNIFVSR-EHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRD 335
>sp|P0A197|UBIB_SALTY Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|P0A198|UBIB_SALTI Probable ubiquinone biosynthesis protein UbiB OS=Salmonella typhi
GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|B4TNY1|UBIB_SALSV Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
schwarzengrund (strain CVM19633) GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|B5BIY1|UBIB_SALPK Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
paratyphi A (strain AKU_12601) GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|C0Q3E3|UBIB_SALPC Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
paratyphi C (strain RKS4594) GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|A9MY99|UBIB_SALPB Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ubiB PE=3
SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|Q5PKP2|UBIB_SALPA Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=ubiB PE=3
SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|B4SZ75|UBIB_SALNS Probable ubiquinone biosynthesis protein UbiB OS=Salmonella newport
(strain SL254) GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
>sp|B4TBR5|UBIB_SALHS Probable ubiquinone biosynthesis protein UbiB OS=Salmonella
heidelberg (strain SL476) GN=ubiB PE=3 SV=1
Length = 546
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 197 VYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEI-FASIE 255
V+IK GQ + L P + + + +L K + A ++E +G P E F +
Sbjct: 67 VWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFD 126
Query: 256 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKF 314
P+ +AS+AQVH A L +G + +KV ++ D+K + L V + P+ +
Sbjct: 127 IQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRLLPDGRR 186
Query: 315 LW---LVDETKRNIPKELNFLEEASNITKVTKMFAHFPWLKIPQIHPDLCTSRVLAMDFM 371
L +V E ++ + ELN L E++N ++ + F + P L IP+++ D C+ ++ M+ +
Sbjct: 187 LRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERI 246
Query: 372 EGGQINDVDYITENNINVYEVSDKLGKLYSEMIFNSGFVHSDPHPGNILVRRAQSSNSAE 431
G ++DV + +N N+ ++++ K++ +F F H+D HPGNI V N +
Sbjct: 247 YGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENP-Q 305
Query: 432 LILLDHGLYASLTDDFRTEYAKLWLSILNKD--KVA 465
I +D G+ SL + + A+ +++ N+D KVA
Sbjct: 306 YIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVA 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 385,649,200
Number of Sequences: 539616
Number of extensions: 16547888
Number of successful extensions: 45610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 45048
Number of HSP's gapped (non-prelim): 303
length of query: 1046
length of database: 191,569,459
effective HSP length: 128
effective length of query: 918
effective length of database: 122,498,611
effective search space: 112453724898
effective search space used: 112453724898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)